RPSBLAST alignment for GI: 254780750 and conserved domain: KOG0217
>gnl|CDD|35438 KOG0217, KOG0217, KOG0217, Mismatch repair ATPase MSH6 (MutS family) [Replication, recombination and repair]. Length = 1125
Score = 361 bits (927), Expect = e-100
Identities = 250/882 (28%), Positives = 395/882 (44%), Gaps = 83/882 (9%)
Query: 19 EENLKSSTPMMRQYIEIKSINPDSLVFYRMGDFYELFFDDALLASRCLGITLTKRGKHLG 78
K TP +Q+ EIKS N D++VF++ G FYEL+ DAL+ +R +
Sbjct: 242 PSFWKKFTPGEKQWWEIKSDNFDTIVFFKKGKFYELYEMDALVGARLFDLKFMD------ 295
Query: 79 KDIPMCGVPVHTANHYIQKLIKIGHRIAICEQIESPLEAKKRGNKS-----LVRRNVVRL 133
++P G P + +++ + I+ G+++A EQ E+PL + R K+ +VRR V R+
Sbjct: 296 VNMPHSGFPEGSFDYWADQFIQKGYKVARVEQTETPLGKEIRERKTGKKDKVVRREVCRI 355
Query: 134 VTPGTLTEDQLLSPTDSNYLMAVARIRTE-------WAIAWIDISTGIFKISTSNHDRL- 185
+T GTLT+ LL+ + YLMA+ + + +ID STG I DR
Sbjct: 356 LTNGTLTDIALLTSDLAKYLMAIKESEESYSTGEVSFGVCFIDTSTGEINIGEFCDDRHC 415
Query: 186 --ISDIM-RIDPREIIFSEKELSHAEYKSLFETLGNVAV---AQPNVFFDHSISESRI-- 237
+ ++ ++ P E+I K LS + L + V + F+D + I
Sbjct: 416 SKLDTLLSQVRPVELIEERKNLSDPTKVIIKLKLSSNLVENLVPKSEFWDSEKTGREIIS 475
Query: 238 ADYYNITTVD-------TFGSFSQVEKTAAAAAISYIKK-------TQMVNKPTIGYPER 283
DY+ ++ + + ++ +A Y+KK M N Y
Sbjct: 476 EDYFESLGLEDSPSILKSPNTDKELALSAFGGLFYYLKKLLIDEELLSMKNFEE--YDSL 533
Query: 284 EDIQSTLFIDSAARSNLEILRTLS-GSREQSLLKTIDYSITGAGGRLFAERIASPLTDST 342
+ QS + +D A NLEI G E +L ++ T G RL + +PL D
Sbjct: 534 D--QSEMVLDGATLENLEIFSNSRNGGDEGTLFYAVNRCSTPFGKRLLKTWLMAPLCDKE 591
Query: 343 KINTRLDSINFFIQNPILINPIQKILKSSPDVPRSLSRL-KIGRGEPKDIA-VIR--DGI 398
I R D+++ + P+ + + LK PD+ R L R+ G K IA IR +G
Sbjct: 592 DIKQRQDAVDSLGKAPMDRTKVGETLKKLPDLERLLVRIHNGGEKNKKKIADFIRVLEGF 651
Query: 399 RSGINILNLFLKNDLP-EELRGAVEKLKKLPQSLEKTLSSMLSDDLPTFKRDGGFL-RDG 456
+ +L + E LR E L+ +P E+ + + D ++G + +G
Sbjct: 652 KEINKLLGSLINVLKEGEGLRLISELLESMPNLSEEIENWTEAFDRVKAVKEGVIVPLEG 711
Query: 457 ADASLDETRSLRDQSKRIIASLQLKYAEETKIKNLKIKHNNNLGYFIEV------TSSSA 510
D DE D+++ + + +Y + ++ Y +EV SS
Sbjct: 712 FDEEYDEAMKRVDEAENELLAYLEEYRKRLGCSSIVFVDVGKDVYQLEVPENGGVPSSLR 771
Query: 511 SVLKKDLESKDRFIHRQTMSNLTRFTTLELIDLENRITNATNSALLIELESFEILSNAII 570
L + R+ + R L + E R ++ + + +
Sbjct: 772 YELMSAKKGVSRY-----YTPDLRKLIAHLDEAEERKKSSLSDLK----RRLIVRFDEHY 822
Query: 571 EQSESLDNASQVIAIIDISIALAILAK--EQNYCRPIIDNSTN----FIVKDGRHPIVEK 624
++ + +A ID ++LA +K CRP I ST+ IVK RHP
Sbjct: 823 IIWQAT---VKALASIDCLLSLAETSKGLGGPMCRPEIVESTDTPGFLIVKGLRHPCFSL 879
Query: 625 TLKQQSSKPFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQNALIVIMAQMGSYVP 684
+ FI ND +L + G LLTGPNMGGKST LRQ + VI+AQ+G VP
Sbjct: 880 PS---TGTSFIPNDVELGGAEENREG---LLTGPNMGGKSTLLRQACIAVILAQIGCDVP 933
Query: 685 ASYAHIGIVDKLFSRVGSADNLASGRSTFMVEMIETASILNQATNQSFVILDEIGRGTAT 744
A + +D++F+R+G+ D++ SG STF VE+ ET IL AT S VI+DE+GRGT+T
Sbjct: 934 AEVMELTPIDRIFTRLGANDDIMSGESTFFVELSETKKILKHATRHSLVIVDELGRGTST 993
Query: 745 LDGLSIAWATIEYLHETNRCRGLLATHFHELTDLSKSLKRFHNATLQVSDSNEG-IIFLH 803
DG +IA A +E+L E +C G +TH+H L + + E + FL+
Sbjct: 994 FDGTAIAEAVLEHLSEGIQCLGFFSTHYHSLCVDFMHHPQVRLLHMACVVDEEIDVTFLY 1053
Query: 804 KVIPGIADHSYGIQVGKLAGLPNTVISRAYDILKTFEKLYHH 845
K+ GI SYG V ++AGLP+ VI RA EK +
Sbjct: 1054 KLEEGICPKSYGFNVARMAGLPDQVIDRAEIKAHELEKSSAN 1095