RPSBLAST alignment for GI: 254780750 and conserved domain: KOG0218
>gnl|CDD|35439 KOG0218, KOG0218, KOG0218, Mismatch repair MSH3 [Replication, recombination and repair]. Length = 1070
Score = 359 bits (923), Expect = 2e-99
Identities = 234/911 (25%), Positives = 409/911 (44%), Gaps = 115/911 (12%)
Query: 26 TPMMRQYIEIKSINPDSLVFYRMGDFYELFFDDALLASRCLGITLTKRGKHLGKDIPMCG 85
TP+ +Q E+K + D ++ +G Y F +DA +ASR LGI H +
Sbjct: 163 TPLEQQVKELKMHHRDKVLVIEVGYKYRFFGEDAEIASRVLGIYC-----HNDHNFMTAS 217
Query: 86 VPVHTANHYIQKLIKIGHRIAICEQIE-SPLEAKKRGNKSLVRRNVVRLVTPGTLTED-- 142
P N ++++L+ G ++A+ +Q E + +++ SL R + + T TL ED
Sbjct: 218 FPDVRLNVHLERLVHHGLKVAVVKQTETAAIKSHGASRSSLFERKLSAVYTKATLGEDST 277
Query: 143 ------QLLSPTDSNYLMAVARIRTEWAIAWIDISTGIFKISTSN----HDRLISDIMR- 191
++L T S++L+ V + + G+ + S +D + R
Sbjct: 278 FVLRGERILGDT-SSFLLCVRDNVHKSKEKSGVVKVGLIGVQLSTGEVVYDEFQDNFARS 336
Query: 192 --------IDPREIIFSEKELS------HAEYKSLFETLGNVAVAQPNVFFDHSISESRI 237
+ P E++ + + S+ V + V ++ +I
Sbjct: 337 ELQTRISSLQPIELLLNTDLSPQTVALLFKDNVSVELIHKRVYRLENAVVQAIKLANEKI 396
Query: 238 ADYYNITTVDTFGSFSQVEKT--------AAAAAISYIKK---TQMVNKPTIGYPEREDI 286
++ + + + A IS++K+ Q++ P+ P
Sbjct: 397 QNFEDDKEMLEGSEIICLIMNLSHPSVICLLAKLISHLKEFNLEQVLLIPSFYSP--FSS 454
Query: 287 QSTLFIDSAARSNLEILRTLSGSREQ-SLLKTIDYSITGAGGRLFAERIASPLTDSTKIN 345
+ + + +LEI + E+ SL +D++ T G R+ E + PL D +I
Sbjct: 455 KEHMTLSPNTLQSLEIFTNQTDGSEKGSLFWVLDHTRTSFGLRMLREWVTKPLVDVHQIE 514
Query: 346 TRLDS---INFFIQNPILINPIQKILKSSPDVPRSLSRLKIGRGEPKD------------ 390
RLD+ I N I+ I ++L PD+ R L+R+ G P+
Sbjct: 515 ERLDAVEEITSHSSNSIVFESINQMLNRLPDLLRGLNRIYYGTCTPRKEFFFVLKQIYSA 574
Query: 391 ---------------IAVIRDGIRSGINILNLFLKNDLPEELRGAVEKLKKLPQS--LEK 433
+ R G +S + + L + + P L L S +E
Sbjct: 575 VSHFQMHQSYLEHFKSSDGRSGKQSPL-LRRLISELNEPLSTSQLPHFLTMLNVSAAMEG 633
Query: 434 TLSSML--SDDLPTFKRDGGFLRDGADASLDETRSLRDQSKRIIASLQLKYAEETKIKNL 491
+ P + + + E+ R Q K +A ++ KY K NL
Sbjct: 634 NKDDQFKDFSNFPLYDE-----SEDIIKVIRESEMSRSQLKEHLAEIR-KY---LKRPNL 684
Query: 492 KIKHNNNLGYFIEVTSSSASVLKKDLESKDRFIHRQTMSNLTRFTTLELIDLENRITNAT 551
+ + + + + IEV +S + D +I + ++RF T + L +
Sbjct: 685 EFRQVSGVDFLIEVKNSQIKKIPDD------WIKVNSTKMVSRFHTPRIQKLLQELEYYK 738
Query: 552 NSALLIELESFEILSNAIIEQSESLDNASQVIAIIDISIALAILAKEQNYCRP-IIDNST 610
++ ++ N I E L A+ +A +D ++LA + NY RP +D
Sbjct: 739 ELLIIESEAQYKSFLNKISEHYTELRKATLNLATLDCILSLAATSCNVNYVRPTFVDGQQ 798
Query: 611 NFIVKDGRHPIVEKTLKQQSSKPFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQN 670
I+K+GRHP++E L F+ ND LS + ++TGPNMGGKS+++RQ
Sbjct: 799 EIIIKNGRHPVIESLLVDY----FVPNDIMLS----PEGERCNIITGPNMGGKSSYIRQV 850
Query: 671 ALIVIMAQMGSYVPASYAHIGIVDKLFSRVGSADNLASGRSTFMVEMIETASILNQATNQ 730
ALI IMAQ+GS+VPA A + I D + +R+G++DN+ +GRSTFMVEM++T IL +AT +
Sbjct: 851 ALITIMAQIGSFVPAEEARLSIFDGVLTRMGASDNIINGRSTFMVEMLDTLEILKKATKR 910
Query: 731 SFVILDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHELTDLSK----SLKRFH 786
S VILDE+GRGT+T DG++I++AT++Y E ++C L THF L ++ ++ +H
Sbjct: 911 SLVILDELGRGTSTHDGIAISYATLKYFSELSKCLILFVTHFPMLGEIESGFPGQVRNYH 970
Query: 787 NATLQVSD----SNEGIIFLHKVIPGIADHSYGIQVGKLAGLPNTVISRAYDILKTFEKL 842
L+ D + + FL+K++ G+A SYG+ V KLA +P ++I+RA+ I + EK
Sbjct: 971 MGYLESEDKTGEDWDSVTFLYKLVRGLASRSYGLNVAKLARIPKSIINRAFSISEELEKE 1030
Query: 843 YHHNQKDMRLY 853
+ +K ++L+
Sbjct: 1031 SRNERKLLKLF 1041