RPSBLAST alignment for GI: 254780750 and conserved domain: KOG0218

>gnl|CDD|35439 KOG0218, KOG0218, KOG0218, Mismatch repair MSH3 [Replication, recombination and repair]. Length = 1070
 Score =  359 bits (923), Expect = 2e-99
 Identities = 234/911 (25%), Positives = 409/911 (44%), Gaps = 115/911 (12%)

Query: 26   TPMMRQYIEIKSINPDSLVFYRMGDFYELFFDDALLASRCLGITLTKRGKHLGKDIPMCG 85
            TP+ +Q  E+K  + D ++   +G  Y  F +DA +ASR LGI       H   +     
Sbjct: 163  TPLEQQVKELKMHHRDKVLVIEVGYKYRFFGEDAEIASRVLGIYC-----HNDHNFMTAS 217

Query: 86   VPVHTANHYIQKLIKIGHRIAICEQIE-SPLEAKKRGNKSLVRRNVVRLVTPGTLTED-- 142
             P    N ++++L+  G ++A+ +Q E + +++      SL  R +  + T  TL ED  
Sbjct: 218  FPDVRLNVHLERLVHHGLKVAVVKQTETAAIKSHGASRSSLFERKLSAVYTKATLGEDST 277

Query: 143  ------QLLSPTDSNYLMAVARIRTEWAIAWIDISTGIFKISTSN----HDRLISDIMR- 191
                  ++L  T S++L+ V     +       +  G+  +  S     +D    +  R 
Sbjct: 278  FVLRGERILGDT-SSFLLCVRDNVHKSKEKSGVVKVGLIGVQLSTGEVVYDEFQDNFARS 336

Query: 192  --------IDPREIIFSEKELS------HAEYKSLFETLGNVAVAQPNVFFDHSISESRI 237
                    + P E++ +             +  S+      V   +  V     ++  +I
Sbjct: 337  ELQTRISSLQPIELLLNTDLSPQTVALLFKDNVSVELIHKRVYRLENAVVQAIKLANEKI 396

Query: 238  ADYYNITTVDTFGSFSQVEKT--------AAAAAISYIKK---TQMVNKPTIGYPEREDI 286
             ++ +   +        +             A  IS++K+    Q++  P+   P     
Sbjct: 397  QNFEDDKEMLEGSEIICLIMNLSHPSVICLLAKLISHLKEFNLEQVLLIPSFYSP--FSS 454

Query: 287  QSTLFIDSAARSNLEILRTLSGSREQ-SLLKTIDYSITGAGGRLFAERIASPLTDSTKIN 345
            +  + +      +LEI    +   E+ SL   +D++ T  G R+  E +  PL D  +I 
Sbjct: 455  KEHMTLSPNTLQSLEIFTNQTDGSEKGSLFWVLDHTRTSFGLRMLREWVTKPLVDVHQIE 514

Query: 346  TRLDS---INFFIQNPILINPIQKILKSSPDVPRSLSRLKIGRGEPKD------------ 390
             RLD+   I     N I+   I ++L   PD+ R L+R+  G   P+             
Sbjct: 515  ERLDAVEEITSHSSNSIVFESINQMLNRLPDLLRGLNRIYYGTCTPRKEFFFVLKQIYSA 574

Query: 391  ---------------IAVIRDGIRSGINILNLFLKNDLPEELRGAVEKLKKLPQS--LEK 433
                            +  R G +S + +  L  + + P         L  L  S  +E 
Sbjct: 575  VSHFQMHQSYLEHFKSSDGRSGKQSPL-LRRLISELNEPLSTSQLPHFLTMLNVSAAMEG 633

Query: 434  TLSSML--SDDLPTFKRDGGFLRDGADASLDETRSLRDQSKRIIASLQLKYAEETKIKNL 491
                      + P +        +     + E+   R Q K  +A ++ KY    K  NL
Sbjct: 634  NKDDQFKDFSNFPLYDE-----SEDIIKVIRESEMSRSQLKEHLAEIR-KY---LKRPNL 684

Query: 492  KIKHNNNLGYFIEVTSSSASVLKKDLESKDRFIHRQTMSNLTRFTTLELIDLENRITNAT 551
            + +  + + + IEV +S    +  D      +I   +   ++RF T  +  L   +    
Sbjct: 685  EFRQVSGVDFLIEVKNSQIKKIPDD------WIKVNSTKMVSRFHTPRIQKLLQELEYYK 738

Query: 552  NSALLIELESFEILSNAIIEQSESLDNASQVIAIIDISIALAILAKEQNYCRP-IIDNST 610
               ++     ++   N I E    L  A+  +A +D  ++LA  +   NY RP  +D   
Sbjct: 739  ELLIIESEAQYKSFLNKISEHYTELRKATLNLATLDCILSLAATSCNVNYVRPTFVDGQQ 798

Query: 611  NFIVKDGRHPIVEKTLKQQSSKPFIANDCDLSCPNDKNSGKLWLLTGPNMGGKSTFLRQN 670
              I+K+GRHP++E  L       F+ ND  LS        +  ++TGPNMGGKS+++RQ 
Sbjct: 799  EIIIKNGRHPVIESLLVDY----FVPNDIMLS----PEGERCNIITGPNMGGKSSYIRQV 850

Query: 671  ALIVIMAQMGSYVPASYAHIGIVDKLFSRVGSADNLASGRSTFMVEMIETASILNQATNQ 730
            ALI IMAQ+GS+VPA  A + I D + +R+G++DN+ +GRSTFMVEM++T  IL +AT +
Sbjct: 851  ALITIMAQIGSFVPAEEARLSIFDGVLTRMGASDNIINGRSTFMVEMLDTLEILKKATKR 910

Query: 731  SFVILDEIGRGTATLDGLSIAWATIEYLHETNRCRGLLATHFHELTDLSK----SLKRFH 786
            S VILDE+GRGT+T DG++I++AT++Y  E ++C  L  THF  L ++       ++ +H
Sbjct: 911  SLVILDELGRGTSTHDGIAISYATLKYFSELSKCLILFVTHFPMLGEIESGFPGQVRNYH 970

Query: 787  NATLQVSD----SNEGIIFLHKVIPGIADHSYGIQVGKLAGLPNTVISRAYDILKTFEKL 842
               L+  D      + + FL+K++ G+A  SYG+ V KLA +P ++I+RA+ I +  EK 
Sbjct: 971  MGYLESEDKTGEDWDSVTFLYKLVRGLASRSYGLNVAKLARIPKSIINRAFSISEELEKE 1030

Query: 843  YHHNQKDMRLY 853
              + +K ++L+
Sbjct: 1031 SRNERKLLKLF 1041