HHsearch alignment for GI: 254780751 and conserved domain: COG1185

>COG1185 Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis].
Probab=97.35  E-value=0.0002  Score=49.87  Aligned_cols=62  Identities=10%  Similarity=0.012  Sum_probs=28.1

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHH-------HHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE
Q ss_conf             9985045575799999999999999987-------7642014322123456458888887523766311
Q gi|254780751|r  248 ILRTAGASRTKIEIKRDFEYLMRLWDNV-------RELALNSVAPHLVYEEGNLIKRAIRDLYCKDISE  309 (723)
Q Consensus       248 IiRT~a~~~~~~~l~~d~~~L~~~w~~i-------~~~~~~~~~p~li~~~~~~~~~~ird~~~~~~~~  309 (723)
T Consensus       187 MVE~~a~~l~E~~ml~Av~fg~~~~~~~~~~qe~l~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~l~~  255 (692)
T COG1185         187 MVESEADELDEEVMLEAVEFGHEAIQSVINAQEELALEVGKKKWELEPPSLDEELEAKVRDLAEDELKE  255 (692)
T ss_pred             EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             043466668889999999988898999999999999973765532335686489999999986788999