HHsearch alignment for GI: 254780751 and conserved domain: COG1185
>COG1185 Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis].
Probab=97.35 E-value=0.0002 Score=49.87 Aligned_cols=62 Identities=10% Similarity=0.012 Sum_probs=28.1
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHH-------HHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE
Q ss_conf 9985045575799999999999999987-------7642014322123456458888887523766311
Q gi|254780751|r 248 ILRTAGASRTKIEIKRDFEYLMRLWDNV-------RELALNSVAPHLVYEEGNLIKRAIRDLYCKDISE 309 (723)
Q Consensus 248 IiRT~a~~~~~~~l~~d~~~L~~~w~~i-------~~~~~~~~~p~li~~~~~~~~~~ird~~~~~~~~ 309 (723)
T Consensus 187 MVE~~a~~l~E~~ml~Av~fg~~~~~~~~~~qe~l~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~l~~ 255 (692)
T COG1185 187 MVESEADELDEEVMLEAVEFGHEAIQSVINAQEELALEVGKKKWELEPPSLDEELEAKVRDLAEDELKE 255 (692)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 043466668889999999988898999999999999973765532335686489999999986788999