HHsearch alignment for GI: 254780751 and conserved domain: PRK00087
>PRK00087 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed.
Probab=96.60 E-value=0.004 Score=40.81 Aligned_cols=36 Identities=31% Similarity=0.528 Sum_probs=17.7
Q ss_pred CCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHC
Q ss_conf 04287879899783638823135327897713022213
Q gi|254780751|r 37 QIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEI 74 (723)
Q Consensus 37 ~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei 74 (723)
T Consensus 302 ~~~G~iV~G~Vv~v~~~--~v~VDiG~KseG~Ip~~E~ 337 (670)
T PRK00087 302 IRRGDIVKGTVVSVNEN--EVFVDVGYKSEGVIPLEEL 337 (670)
T ss_pred CCCCCEEEEEEEEEECC--EEEEEECCCCCEEEEHHHH
T ss_conf 77898799999999389--8999836784368889993