HHsearch alignment for GI: 254780751 and conserved domain: PRK08563

>PRK08563 DNA-directed RNA polymerase subunit E'; Provisional.

Probab=93.78  E-value=0.54  Score=25.98  Aligned_cols=65  Identities=25%  Similarity=0.294  Sum_probs=50.4

Q ss_pred             CEEEEEEEECCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCC
Q ss_conf             60799999899899999607334604287879899783638823135327897713022213712102
Q gi|254780751|r   13 EETRVVVLRDNRVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYYQ   80 (723)
Q Consensus        13 ~e~Rvav~e~g~l~e~~~e~~~~~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~~   80 (723)
T Consensus        55 ~eG~I~~gdG~~~~~V~F~~ivfrPf~~EVv~g~V~~~~~--~G~fv~~Gp-~d~~vh~sqi~dd~~~  119 (182)
T PRK08563         55 GEGKIVPGDGATYHEVEFDALVFKPELQEVVEGEVVEVVE--FGAFVRIGP-VDGLLHISQIMDDYIS  119 (182)
T ss_pred             CCCEEEECCCCEEEEEEEEEEEEECCCCCEEEEEEEEEEC--CEEEEEEEC-CCEEEEHHHCCCCCCE
T ss_conf             4998991999899999978999941368489999999966--769999846-6117609994777623