HHsearch alignment for GI: 254780751 and conserved domain: PRK11824
>PRK11824 polynucleotide phosphorylase/polyadenylase; Provisional.
Probab=97.91 E-value=1.8e-05 Score=57.09 Aligned_cols=39 Identities=15% Similarity=0.154 Sum_probs=33.8
Q ss_pred CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 310135769999987302379999999984887999847
Q gi|254780751|r 517 HNIIVHTHSDVVLYLLNQKRATIVEYEARFGVSINVVIG 555 (723)
Q Consensus 517 ~~i~v~~~~~va~~lln~kr~~l~~lE~~~~~~I~i~~d 555 (723)
T Consensus 554 ~i~~~~i~~~ki~~vIG~gGk~Ik~i~e~tg~~Idi~dd 592 (694)
T PRK11824 554 RIETIKIDPDKIRDVIGPGGKTIREITEETGAKIDIEDD 592 (694)
T ss_pred EEEEEEECHHHHHHEECCCHHHHHHHHHHHCCEEEEECC
T ss_conf 799999787986650686338899999988988999689