HHsearch alignment of GI: 254780751 and MMDB domain: 1wi5_A_
>1wi5_A (A:) RRP5 protein homolog; S1 domain, OB-fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=98.08 E-value=9.7e-06 Score=58.54 Aligned_cols=93 Identities=17% Similarity=0.103 Sum_probs=76.5
Q ss_pred CCCCCCCEEEEEEEEECCCCCEEEEEECC-CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 46042878798997836388231353278-97713022213712102898899999998886311111000000011122
Q gi|254780751|r 35 KKQIKGNIYLAKVTRVEPSLQAAFVDYGG-NRHGFLPFLEIHPDYYQIPFSDRQALLKESNIAQTDSEAVADDVTHGDVT 113 (723)
Q Consensus 35 ~~~~~GnIY~G~V~~V~p~lqAAFVdiG~-~k~gFL~~~ei~~~y~~ip~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 113 (723)
.....|.||.|+|++|.|. .|||+++. +-.||||++++..+||.
T Consensus 17 ~~l~~G~~v~g~V~~v~~~--G~fV~l~~~~~~g~i~~sels~~~~~--------------------------------- 61 (119)
T 1wi5_A 17 EALKPGMLLTGTVSSLEDH--GYLVDIGVDGTRAFLPLLKAQEYIRQ--------------------------------- 61 (119)
T ss_dssp TTCCTTCEEEEEEEEECSS--EEEEECCCSSCEEEEEHHHHHHHHHH---------------------------------
T ss_pred HHCCCCCEEEEEEEEEEEE--EEEEECCCCCCEEEEEHHHHCCCCCC---------------------------------
T ss_conf 3179997899999988401--89995145540278769993521123---------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCC
Q ss_conf 33444334454222233445543322223432112211121100001223444421331068885799984033323456
Q gi|254780751|r 114 IPNDHSLEEVAPIANFSQETEEESIISANNDVVSNVEDVKGGSPEDVPKKFKRQYCIQEVIKNRQILLVQIVKEERGNKG 193 (723)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lk~gq~ilVQV~ke~~~~Kg 193 (723)
....++++.||.|.|+|.+=-..++.
T Consensus 62 ------------------------------------------------------~~~~~~~~vGd~i~v~V~~vd~~~~~ 87 (119)
T 1wi5_A 62 ------------------------------------------------------KNKGAKLKVGQYLNCIVEKVKGNGGV 87 (119)
T ss_dssp ------------------------------------------------------HSSSCCCCTTCEEEEEEEECCTTSCE
T ss_pred ------------------------------------------------------CCCCCEEEEEEEEEEEEEEEECCCCE
T ss_conf ------------------------------------------------------47300021001899999998379858
Q ss_pred CCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 41012334576523442278875
Q gi|254780751|r 194 AAVTTYLSLAGRYSVLMPNTSKG 216 (723)
Q Consensus 194 a~lT~~isl~Gry~Vl~P~~~~~ 216 (723)
..||..-+..+..-........+
T Consensus 88 i~ls~k~~~~~~~~~~~~~~~~~ 110 (119)
T 1wi5_A 88 VSLSVGHSEVSTAIATEQQSWNL 110 (119)
T ss_dssp EEEECCCCCSCCCCCCSSCCCCC
T ss_pred EEEECHHHHHHHHHHHHHHCCCC
T ss_conf 99840197666667667642675