HHsearch alignment of GI: 254780751 and MMDB domain: 2c35_B_81-172

>2c35_B (B:81-172) Human RPB7, DNA-directed RNA polymerase II 19 kDa polypeptide; transcription, nucleotidyltransferase; 2.70A {Homo sapiens}
Probab=96.92  E-value=0.0015  Score=43.36  Aligned_cols=38  Identities=26%  Similarity=0.330  Sum_probs=34.0

Q ss_pred             CCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCC
Q ss_conf             28787989978363882313532789771302221371210
Q gi|254780751|r   39 KGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYY   79 (723)
Q Consensus        39 ~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~   79 (723)
                      +|.||.|+|++|.+  .++||++| +-.||+|.+++..+|.
T Consensus         1 kG~i~~G~V~~v~~--~G~FV~l~-~~eGli~~s~l~~~~~   38 (92)
T 2c35_B            1 KGEVVDAVVTQVNK--VGLFTEIG-PMSCFISRHSIPSEME   38 (92)
T ss_dssp             TTCEEEEEEEEEET--TEEEEEET-TEEEEEEGGGSCTTEE
T ss_pred             CCEEEEEEEEEECC--CEEEEEEE-CCCEEECCHHCCCEEE
T ss_conf             63599999998727--86999960-6311201011023032