HHsearch alignment of GI: 254780751 and MMDB domain: 3cdi_A_151-239_464-723

>3cdi_A (A:151-239,A:464-723) Polynucleotide phosphorylase; mRNA turnover, RNAse, RNA degradation, kinase, transferase; 2.60A {Escherichia coli} PDB: 1sro_A
Probab=97.45  E-value=2.1e-05  Score=56.18  Aligned_cols=42  Identities=31%  Similarity=0.498  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCC
Q ss_conf             60428787989978363882313532789771302221371210
Q gi|254780751|r   36 KQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYY   79 (723)
Q Consensus        36 ~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~   79 (723)
                      ...+|.||.|+|++|.|  ..|||+++.+..||||.+++..+++
T Consensus       250 ~~~vG~i~~g~V~~I~~--fGaFV~l~~g~~GlihiSel~~~rv  291 (349)
T 3cdi_A          250 EIEVGRVYTGKVTRIVD--FGAFVAIGGGKEGLVHISQIADKRV  291 (349)
T ss_dssp             --------------------------------------------
T ss_pred             CCCCCCEEEEEEEEEEE--EEEEEEECCCCCEEEEEECCCCCCC
T ss_conf             77669889999999994--3299996699944787020467565