HHsearch results for GI: 254780751 and protein with PDBid: 1hh2_P

>1hh2_P NUSA, N utilization substance protein A; transcription regulation, termination; 2.1A {Thermotoga maritima} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 d.202.1.1 PDB: 1l2f_A

Probab=90.50  E-value=0.62  Score=24.09  Aligned_cols=36  Identities=31%  Similarity=0.273  Sum_probs=27.6

Q ss_pred             CCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCC
Q ss_conf             042878798997836388231353278977130222137
Q gi|254780751|r   37 QIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIH   75 (723)
Q Consensus        37 ~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~   75 (723)
                      ...|.|-.|.|.++.++  ..+||+| +-.|+||-+|.-
T Consensus       132 ~k~GeIVtG~V~r~~~~--~~~vdlg-~~ea~LP~~eqi  167 (344)
T 1hh2_P          132 ELKGTVTTAEVIRVMGE--WADIRIG-KLETRLPKKEWI  167 (344)
T ss_dssp             CCTTCEEEEEEEEECSS--EEEEEET-TEEEEEEGGGSC
T ss_pred             HHCCCEEEEEEEEEECC--CEEEECC-CCCCCCCHHHCC
T ss_conf             85691688889998524--0378427-645648978849