HHsearch results for GI: 254780751 and protein with PDBid: 1wi5_A
>1wi5_A RRP5 protein homolog; S1 domain, OB-fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=97.30 E-value=0.00031 Score=46.99 Aligned_cols=86 Identities=19% Similarity=0.151 Sum_probs=63.3
Q ss_pred CCCCCCCEEEEEEEEECCCCCEEEEEEC-CCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 4604287879899783638823135327-897713022213712102898899999998886311111000000011122
Q gi|254780751|r 35 KKQIKGNIYLAKVTRVEPSLQAAFVDYG-GNRHGFLPFLEIHPDYYQIPFSDRQALLKESNIAQTDSEAVADDVTHGDVT 113 (723)
Q Consensus 35 ~~~~~GnIY~G~V~~V~p~lqAAFVdiG-~~k~gFL~~~ei~~~y~~ip~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 113 (723)
..-..|.|+.|.|++|.+. .+||++| .+-.||||..++..+.+-
T Consensus 17 ~~l~~G~iv~G~V~~i~~~--G~~V~~g~~~~~G~l~~~e~~~~~~~--------------------------------- 61 (119)
T 1wi5_A 17 EALKPGMLLTGTVSSLEDH--GYLVDIGVDGTRAFLPLLKAQEYIRQ--------------------------------- 61 (119)
T ss_dssp TTCCTTCEEEEEEEEECSS--EEEEECCCSSCEEEEEHHHHHHHHHH---------------------------------
T ss_pred CCCCCCCEEEEEEEEECCC--EEEEEECCCCCCCEECHHHHHCCCCC---------------------------------
T ss_conf 0078998999999983398--79998067543230125564123444---------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCC
Q ss_conf 33444334454222233445543322223432112211121100001223444421331068885799984033323456
Q gi|254780751|r 114 IPNDHSLEEVAPIANFSQETEEESIISANNDVVSNVEDVKGGSPEDVPKKFKRQYCIQEVIKNRQILLVQIVKEERGNKG 193 (723)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lk~gq~ilVQV~ke~~~~Kg 193 (723)
....+.+++||.|.|.|.+-....+-
T Consensus 62 ------------------------------------------------------~~~~~~~~vGq~v~~~V~~vd~~~~~ 87 (119)
T 1wi5_A 62 ------------------------------------------------------KNKGAKLKVGQYLNCIVEKVKGNGGV 87 (119)
T ss_dssp ------------------------------------------------------HSSSCCCCTTCEEEEEEEECCTTSCE
T ss_pred ------------------------------------------------------CCCCCCCCCCCEEEEEEEEEECCCCE
T ss_conf ------------------------------------------------------57432325899999999999899999
Q ss_pred CCCCCCCCCCCCCEEE
Q ss_conf 4101233457652344
Q gi|254780751|r 194 AAVTTYLSLAGRYSVL 209 (723)
Q Consensus 194 a~lT~~isl~Gry~Vl 209 (723)
..||..-+.......-
T Consensus 88 v~LS~k~~~~~~~~~~ 103 (119)
T 1wi5_A 88 VSLSVGHSEVSTAIAT 103 (119)
T ss_dssp EEEECCCCCSCCCCCC
T ss_pred EEEEECHHHHHHHHHH
T ss_conf 9996147872034554