HHsearch results for GI: 254780751 and protein with PDBid: 1y14_B
>1y14_B B16, RPB7, DNA-directed RNA polymerase II 19 kDa polypeptide; transferase; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.5 d.230.1.1 PDB: 1nt9_G 1wcm_G 1pqv_G 1y1v_G 1y1w_G 1y1y_G 1y77_G* 2b63_G* 2ja5_G* 2ja6_G* 2ja7_G* 2ja8_G* 2r7z_G 2r92_G 2r93_G 2vum_G* 3fki_G 3h3v_H 3hou_G* 3hov_G* ...
Probab=92.75 E-value=0.22 Score=27.18 Aligned_cols=53 Identities=15% Similarity=0.097 Sum_probs=37.4
Q ss_pred EEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCC
Q ss_conf 89999960733460428787989978363882313532789771302221371210
Q gi|254780751|r 24 RVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYY 79 (723)
Q Consensus 24 ~l~e~~~e~~~~~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~ 79 (723)
......++-.--+...|.++.|+|.+|.+. ++||.+|.- .+|.+.+.+.++|.
T Consensus 68 ~~~~v~~~~~v~~p~~ge~i~g~V~~v~~~--Gi~v~~g~~-~~~~~~~~~~~~~~ 120 (171)
T 1y14_B 68 AEFNVKYRAVVFKPFKGEVVDGTVVSCSQH--GFEVQVGPM-KVFVTKHLMPQDLT 120 (171)
T ss_dssp --CEEEEEEEEECCCTTCEEEEEEEEEETT--EEEEEETTE-EEEEEGGGSCTTCE
T ss_pred EEEEEEEEEEEEECCCCCEEEEEEEEEECC--EEEEEECCC-EEEEECHHCCCCEE
T ss_conf 899999999998357998999999999678--799995694-69987211344258