HHsearch results for GI: 254780751 and protein with PDBid: 2je6_I

>2je6_I RRP4, exosome complex RNA-binding protein 1; nuclease, hydrolase, exonuclease, phosphorolytic, exoribonuclease, RNA degradation; HET: 1PE; 1.6A {Sulfolobus solfataricus} SCOP: b.40.4.5 b.84.4.2 d.51.1.1 PDB: 2jea_I* 2jeb_I* 3l7z_C

Probab=95.18  E-value=0.16  Score=28.12  Aligned_cols=37  Identities=22%  Similarity=0.219  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHC
Q ss_conf             604287879899783638823135327897713022213
Q gi|254780751|r   36 KQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEI   74 (723)
Q Consensus        36 ~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei   74 (723)
                      ...+|++-.|+|+.+-+  +.+|||||..-.|+||++++
T Consensus        71 ~P~vGDiVIG~V~~v~~--~~~~VdI~s~~~a~L~~~~~  107 (251)
T 2je6_I           71 YPKINDIVIGLVEDVEI--YGWVVDIKAPYKAYLPASNL  107 (251)
T ss_dssp             CCCTTCEEEEEEEEECS--SEEEEECSSSSCEEEEHHHH
T ss_pred             CCCCCCEEEEEEEEEEC--CEEEEECCCCCCEEEEHHHC
T ss_conf             78899989999998616--67999848984158366773