HHsearch results for GI: 254780751 and protein with PDBid: 2khj_A

>2khj_A 30S ribosomal protein S1; OB fold, acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}

Probab=97.50  E-value=0.0002  Score=48.31  Aligned_cols=41  Identities=32%  Similarity=0.361  Sum_probs=35.6

Q ss_pred             CCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCC
Q ss_conf             6042878798997836388231353278977130222137121
Q gi|254780751|r   36 KQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDY   78 (723)
Q Consensus        36 ~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y   78 (723)
                      ..-+|.|+.|+|.+|.+.  .+||+++.+-.||+|++|+..++
T Consensus        28 ~~k~G~iv~G~V~~I~~~--Gv~V~l~~~i~G~i~~~els~~~   68 (109)
T 2khj_A           28 LNKKGAIVTGKVTAVDAK--GATVELADGVEGYLRASEASRDR   68 (109)
T ss_dssp             TCCSSSEEEEEEEEECSS--CEEEECSTTCBCCBCTTCCCSSS
T ss_pred             HCCCCCEEEEEEEEEECC--EEEEEECCCCEEEEEHHHCCCCC
T ss_conf             489999999999999897--79999799978998689927553