HHsearch results for GI: 254780751 and protein with PDBid: 2nn6_H

>2nn6_H Exosome complex exonuclease RRP4; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2 d.51.1.1

Probab=91.02  E-value=0.22  Score=27.26  Aligned_cols=52  Identities=13%  Similarity=0.115  Sum_probs=38.4

Q ss_pred             CCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCC
Q ss_conf             998999996073346042878798997836388231353278977130222137
Q gi|254780751|r   22 DNRVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIH   75 (723)
Q Consensus        22 ~g~l~e~~~e~~~~~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~   75 (723)
                      .++++.+.--+..-...+|++-.|+|+.|-+.  -++||||..-.|.|+++.++
T Consensus        78 ~nk~VsV~pl~~rY~P~vGDiVIGrV~~V~~~--~w~VDI~S~~~A~L~ls~v~  129 (308)
T 2nn6_H           78 VNKLICVKALKTRYIGEVGDIVVGRITEVQQK--RWKVETNSRLDSVLLLSSMN  129 (308)
T ss_dssp             ETTEEEEEESSCCCCCCSSBCCCEEEEEEETT--EEEEECSSSSCEEEESSCCC
T ss_pred             ECCEEEEEECCCCCCCCCCCEEEEEEEEEECC--EEEEECCCCCCCEECCCCCC
T ss_conf             49979999799743698899999999886054--59998189756343343012