HHsearch results for GI: 254780751 and protein with PDBid: 3cdi_A

>3cdi_A Polynucleotide phosphorylase; mRNA turnover, RNAse, RNA degradation, kinase, transferase; 2.60A {Escherichia coli} PDB: 1sro_A

Probab=97.43  E-value=1.6e-05  Score=55.90  Aligned_cols=42  Identities=10%  Similarity=0.103  Sum_probs=35.0

Q ss_pred             CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf             431013576999998730237999999998488799984787
Q gi|254780751|r  516 AHNIIVHTHSDVVLYLLNQKRATIVEYEARFGVSINVVIGIE  557 (723)
Q Consensus       516 ~~~i~v~~~~~va~~lln~kr~~l~~lE~~~~~~I~i~~d~~  557 (723)
                      .+-.++.+||+-..-+.+..-..|..|.+.+|++|.|.-|-.
T Consensus       559 P~~~~~~i~~~ki~~~IG~gGk~I~~i~e~tg~~idi~d~g~  600 (723)
T 3cdi_A          559 PRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGT  600 (723)
T ss_dssp             ------------------------------------------
T ss_pred             CEEEEEEECHHHHHHEECCCHHHHHHHHHHHCCEEEEECCEE
T ss_conf             727999978788555068870889999998898899838838