HHSEARCH alignment of GI: 254780751 and SCOP domain: d2ba0a1

Alignment
>d2ba0a1 b.40.4.5 (A:53-135) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.95  E-value=1.4e-05  Score=54.73  Aligned_cols=39  Identities=21%  Similarity=0.227  Sum_probs=34.9

Q ss_pred             CCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCC
Q ss_conf             04287879899783638823135327897713022213712
Q gi|254780751|r   37 QIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPD   77 (723)
Q Consensus        37 ~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~   77 (723)
                      ..+|+|+.|+|++|.+.  .+|||||.+-+||||.+|+..+
T Consensus         3 Pk~Gd~V~G~V~~v~~~--g~~V~i~~~~~g~l~~se~s~~   41 (83)
T d2ba0a1           3 PSVGDVVIGIIREVAAN--GWAVDIYSPYQAFLPVSENPEM   41 (83)
T ss_dssp             CCTTCEEEEEEEEECSS--EEEEECSSSSCEEEEGGGCTTC
T ss_pred             CCCCCEEEEEEEEEECC--EEEEECCCCEEEEEECCCCCCC
T ss_conf             98999999999999798--8999648994688762030463


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: S1-domain of exosome complex RNA-binding protein 1, ECR1
species: Archaeoglobus fulgidus [TaxId: 2234]