RPSBLAST alignment of GI: 254780751 and protein with PDBid: 2bx2

>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A Length = 517

 Score =  325 bits (835), Expect = 1e-89
 Identities = 172/411 (41%), Positives = 255/411 (62%), Gaps = 3/411 (0%)

Query: 159 DVPKKFKRQYCIQEVIKNRQILLVQIVKEERGNKGAAVTTYLSLAGRYSVLMPNTSKGET 218
                   +  I++V++  Q ++VQI KEERGNKGAA+TT++SLAG Y VLMPN  +   
Sbjct: 86  PANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRA-G 144

Query: 219 ISRKITNPVDRKNLKEIARGLEVPAGMGVILRTAGASRTKIEIKRDFEYLMRLWDNVREL 278
              +     DR  LKE    LE+P GMG+I+RTAG  ++   ++ D  + ++ W+ +++ 
Sbjct: 145 GISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKA 204

Query: 279 ALNSVAPHLVYEEGNLIKRAIRDLYCKDISEIIVSGEKGYREAKDFM-KLLMPSYARIVR 337
           A +  AP L+++E N+I RA RD   +DI EI++   K    A+  +  L  P ++  ++
Sbjct: 205 AESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIK 264

Query: 338 QYEDPHPIFFRSGIEVQLDSLHQTEVTLPSRGYVIINQTEALVSIDVNSGRSTREHCIED 397
            Y    P+F    IE Q++S  Q EV LPS G ++I+ TEAL +ID+NS R+TR   IE+
Sbjct: 265 LYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEE 324

Query: 398 TALQTNLEAAEEIARQLRLRDLAGLIVVDFIDMEEKKNNRSVEKKLKESLKKDRARVQVG 457
           TA  TNLEAA+EIARQLRLRDL GLIV+DFIDM   ++ R+VE +L+E++++DRAR+Q+ 
Sbjct: 325 TAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQIS 384

Query: 458 AISNFGLLEMSRQRIRSSVLESTTKVCTYCKGAGYIRSQSSVALSILRSVEEYLLQYTAH 517
            IS FGLLEMSRQR+  S+ ES+  VC  C G G +R   S++LSILR +EE  L+    
Sbjct: 385 HISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQ 444

Query: 518 NIIVHTHSDVVLYLLNQKRATIVEYEARF-GVSINVVIGIELADKLFYIEK 567
            +       +  YLLN+KR+ +   E R  GV   +V   ++    +++ +
Sbjct: 445 EVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLR 495