HHsearch alignment for GI: 254780752 and conserved domain: COG1686
>COG1686 DacC D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].
Probab=94.11 E-value=0.043 Score=32.76 Aligned_cols=135 Identities=19% Similarity=0.176 Sum_probs=79.1
Q ss_pred CEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---CC-CCCCCCCCCCEEEEECCCCEEEE
Q ss_conf 116640656666117872132344433200123356653100001278874---02-46654456523788037852666
Q gi|254780752|r 441 GGLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIVYAAALD---SG-YTPASVIMDAPIEVVSRGKIWKP 516 (817)
Q Consensus 441 ~a~V~id~~TG~IlA~vGg~d~~~~~~NrA~~~~rqpGSt~KP~vy~~Ale---~G-~tp~t~~~D~p~~~~~~~~~~~p 516 (817)
T Consensus 39 ~~aiviD~~sGkVLy~k------------n~d~~~~pASlTKlMTayv~~ea~~~gki~~~~~v~is~~a~~~~~----~ 102 (389)
T COG1686 39 KAAIVIDADSGKVLYSK------------NADARRPPASLTKLMTAYVVLEALKAGKIKLDDKVTISENAWAKGG----G 102 (389)
T ss_pred CEEEEEECCCCCEEECC------------CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHCCC----C
T ss_conf 43899988998472132------------8898878509999999999998764268884553335675663178----7
Q ss_pred EECCCCCCCHHHHHH----HHHHHCCHHHHHHHHHCCC--C----EEEEEECCCCCCCCCCCC---CCCCCCCCEEHHHH
Q ss_conf 412765442256666----6653044022588762597--2----352110135565556766---56344510000377
Q gi|254780752|r 517 ENYSKNFSGASTLRF----GLEKSRNLMTVRLAHNMGM--T----VVADYAENFGIYDKMLPV---LPMSLGAGETTVLR 583 (817)
Q Consensus 517 ~N~~~~~~G~itl~~----Al~~S~N~~~v~l~~~~G~--~----~~~~~~~~~Gi~~~~~~~---~s~alG~~~vtpl~ 583 (817)
T Consensus 103 S~~~l~~G~~~tv~dLl~gllv~SaNDAA~aLAe~~~Gs~~~Fv~~MN~kA~~LGm~nT~F~npsGL~~~-~~-~tTArD 180 (389)
T COG1686 103 SKMFLKPGETVTVRDLLKGLLVQSANDAAVALAEHLAGSEDAFVAKMNAKAKELGMKNTHFVNPSGLDNP-GQ-VTTARD 180 (389)
T ss_pred CCCEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC-CC-CCCHHH
T ss_conf 6511346988789999999887445499999998717989999999999999858988876188788988-87-466989
Q ss_pred HHHHHHHCCC
Q ss_conf 6743220157
Q gi|254780752|r 584 MVSAYAVFAN 593 (817)
Q Consensus 584 la~aya~~AN 593 (817)
T Consensus 181 la~l~~~l~~ 190 (389)
T COG1686 181 LALLARALIR 190 (389)
T ss_pred HHHHHHHHHH
T ss_conf 9999999988