HHsearch alignment for GI: 254780752 and conserved domain: TIGR02073
>TIGR02073 PBP_1c penicillin-binding protein 1C; InterPro: IPR011815 This entry contains penicillin binding proteins includes the member from Escherichia coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this entry are presumed to have the same basic function..
Probab=100.00 E-value=0 Score=983.03 Aligned_cols=593 Identities=29% Similarity=0.420 Sum_probs=512.4
Q ss_pred CCCEEEECCCCCEEEEEE---CCCEEEECH-HHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 887799907894966661---256046417-9969788854543321461133873799999999998632047886776
Q gi|254780752|r 50 AVTTRIHAGNGALMAEYA---RENRLFLPI-QIIPSHVKYAFVSAEDKNFYYHSGVDIFGIMRAVLHNIRNISHGRRPEG 125 (817)
Q Consensus 50 ~~~t~iyd~dG~~i~~~~---~~~R~~v~~-~~ip~~l~~A~iA~ED~rFy~H~GvD~~gi~RA~~~ni~~~~~g~~~qG 125 (817)
T Consensus 9 p~s~~v~Dr~G~~Lr~~~~~Dg~wRl~~~~~~~isp~~~~~ll~~ED~rFY~H~GVnp~al~Ra~~q~~~---~g~~~SG 85 (786)
T TIGR02073 9 PSSTVVLDRHGTLLRALLASDGQWRLPVDLEEDISPKFLEALLLYEDKRFYWHPGVNPLALLRAAWQNLV---SGRRVSG 85 (786)
T ss_pred CCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHH---CCCCEEC
T ss_conf 8551455036870033412465330478877678989999998651301111388278999999898643---4870005
Q ss_pred CCHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHCC
Q ss_conf 11479998888770-----8883299999999999999866079999999720142674331099999987354234403
Q gi|254780752|r 126 ASTITQQVAKNFLL-----TSNQTMDRKIKEILLSFRLEKAYDKEKILEFYLNEIFFGFNSYGIASAALTYFNKSVSELT 200 (817)
Q Consensus 126 gSTITQQlaKn~~l-----~~e~t~~RK~~E~~lA~~lE~~~sK~eILe~YLN~v~~G~~~yGv~aAA~~YF~K~~~dLt 200 (817)
T Consensus 86 GSTLTMQlaRl~~~L~~~g~~~Rt~~~Kl~Q~~~A~~LE~~~sK~EIL~~YLn~APyGGnl~G~~aAS~~YFgK~p~~Ls 165 (786)
T TIGR02073 86 GSTLTMQLARLLDPLINVGRGSRTLLGKLRQMWRAIQLEARYSKREILEAYLNLAPYGGNLEGLRAASLIYFGKEPSSLS 165 (786)
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 53488899999999983589997778999999999999975193789999983289881427589999998477745678
Q ss_pred CCCEEEEEEECCCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 0271254440157643321---1111466789988876665420111256888753011124454322234571567998
Q gi|254780752|r 201 IEEAAYLAALPKGPSNYDP---FRKNKAAIARRNWVIDRMEENGYISQEQALVAKQKPLKITIKQRRSHLFGSEYFAEEV 277 (817)
Q Consensus 201 l~EaA~LAgi~~~Ps~y~P---~~np~~a~~Rr~~VL~~M~~~g~It~~e~~~a~~~~i~~~~~~~~~~~~~a~yf~e~V 277 (817)
T Consensus 166 ~~Eaa~LavLPqaP~~~~~~~~dr~~~~a~~AR~~ll~~~~~~~~~d~~~~~~~~~~~~~~~~---~~~p~~APH~~~~l 242 (786)
T TIGR02073 166 LAEAALLAVLPQAPSARRLKTTDRLPKAAKAARDRLLDRMAEQGVADSEQVALAALEPLPAEP---EKLPQLAPHFAQKL 242 (786)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC---CCCCCHHHHHHHHH
T ss_conf 899999999731700226642561489999999999998752387678999999850330133---24676148999999
Q ss_pred HHHHHHCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 85311001243312573289852488898999999998767654443210000001211248877863332013355541
Q gi|254780752|r 278 RRQLIDRYGEKALYEDGLSIRTSLDPQLQLYARKALQNGLINYDQNDGFRGPIKRIDLKKDWGNTLASIPTLYDVPEWDI 357 (817)
Q Consensus 278 ~~~l~~~~ge~~l~~~Gl~I~TTiD~~lQ~~Ae~ai~~~l~~~d~~~g~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (817)
T Consensus 243 ~~~~~~~~------~~~s~i~sTlD~~LQ~~~E~~~~~~~~~l~~~---------------------------------- 282 (786)
T TIGR02073 243 LRARPEIA------SVDSKIVSTLDADLQRRLEELARRYLSALRPR---------------------------------- 282 (786)
T ss_pred HHHHHCCC------CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCC----------------------------------
T ss_conf 98411006------77873676247447999999999999861868----------------------------------
Q ss_pred EEEEEECCCCEEEEEECCCCCCCCEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 04765214402676520334431000024442348889665200112233321000013646310123566515775225
Q gi|254780752|r 358 AVVLEVSNSHITIGIRPTIDSNGKVTTERKKGIIEADSMRWVYNKEQTTEETSENRNVLSLGDVIYVEHINEGWRLRQIP 437 (817)
Q Consensus 358 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~i~~~~~~~~l~~~p 437 (817)
T Consensus 283 -------------------------------g------------------------------------------------ 283 (786)
T TIGR02073 283 -------------------------------G------------------------------------------------ 283 (786)
T ss_pred -------------------------------C------------------------------------------------
T ss_conf -------------------------------8------------------------------------------------
Q ss_pred CCCCEEEEECCCCCCCEEEEECCCCCC-CCCCC--CCCCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCEEEEECCCCE
Q ss_conf 553116640656666117872132344-43320--012335665310000127887402-46654456523788037852
Q gi|254780752|r 438 KVQGGLIAMDPRTGRILATIGGFSYSQ-SEFNR--STQAMRQPGSCFKPIVYAAALDSG-YTPASVIMDAPIEVVSRGKI 513 (817)
Q Consensus 438 ~~q~a~V~id~~TG~IlA~vGg~d~~~-~~~Nr--A~~~~rqpGSt~KP~vy~~Ale~G-~tp~t~~~D~p~~~~~~~~~ 513 (817)
T Consensus 284 i~~~A~lVvD~~s~~V~A~vGS~df~d~~~~gqVD~v~A~RSpGStLKPFlYaLald~G~~~p~slL~D~P~~fg~~SG~ 363 (786)
T TIGR02073 284 ISNLAILVVDNRSGAVLAYVGSADFFDDSNAGQVDGVRAIRSPGSTLKPFLYALALDDGLIHPDSLLKDVPLRFGDVSGL 363 (786)
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHCCCCCC
T ss_conf 30257889971798269998245676613050461476676678643189998565652112010101012101472333
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCC----CC-CCCCCCCCCCCCEEHHHHHHHHH
Q ss_conf 66641276544225666666530440225887625972352110135565----55-67665634451000037767432
Q gi|254780752|r 514 WKPENYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADYAENFGIY----DK-MLPVLPMSLGAGETTVLRMVSAY 588 (817)
Q Consensus 514 ~~p~N~~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~----~~-~~~~~s~alG~~~vtpl~la~ay 588 (817)
T Consensus 364 Y~P~Nf~~~F~G~V~v~~AL~~SLNiPAV~ll~~~g~~~f~~~L~~~G~~~~~~~~~~~yGLSL~LGG~e~tL~dLa~lY 443 (786)
T TIGR02073 364 YAPENFDKTFHGPVPVREALARSLNIPAVRLLERLGPPRFASFLRQAGLKLLKPKSRDYYGLSLILGGAEITLQDLANLY 443 (786)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCEEEECCCCCCHHHHHHHH
T ss_conf 26788777646776399986430671489999742926899999970565578000025760131230174489999999
Q ss_pred HHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHC-CCE
Q ss_conf 2015744035446667641024430133585323556666666554554675543535899999999999998734-804
Q gi|254780752|r 589 AVFANGGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAYQITSMLEGVIKH-GTA 667 (817)
Q Consensus 589 a~~AN~G~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~~a~~~~~~L~~vv~~-GTg 667 (817)
T Consensus 444 ~~LA~~G~~~plr~~~~~~----------~~~~-----------~~~~keGnf~~rll~~~aa~~~~diL~~~~~p~~~~ 502 (786)
T TIGR02073 444 AMLANQGLSGPLRFLQADA----------KRPE-----------REESKEGNFGTRLLSPGAAWIVLDILKDRPRPEDTL 502 (786)
T ss_pred HHHHHCCCCCCCCCCCCCC----------CCCC-----------CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9997426665742133545----------6764-----------124666766887578888999999960378842113
Q ss_pred E-H-HCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC----
Q ss_conf 3-2-105996046760467897022798456987999998266898278986442121799999999997489830----
Q gi|254780752|r 668 T-G-KVRLNRPVAGKTGTTSSYRDTWFIGYTPTLVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKEALKNIPSS---- 741 (817)
Q Consensus 668 ~-~-a~~~~~~iaGKTGTt~~~~D~WfvG~tp~~~~~vWvG~D~~~~~~~~~~G~~~a~piw~~~m~~~~~~~p~~---- 741 (817)
T Consensus 503 ~~~~~~~~~~~~AwKTGTSyG~RDAWa~G~~~~Yti~VWvGn~~G~p~-~~~~G~~~AaPllf~i~d~l~~~~~~~~d~~ 581 (786)
T TIGR02073 503 PKSSALSTRLPLAWKTGTSYGFRDAWAAGVSGRYTIGVWVGNFDGKPN-PGFIGAAAAAPLLFDILDALQASEASTRDRV 581 (786)
T ss_pred CCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEEEECCCCCCC-CCEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 100235566535776266478722168610587689997456899999-6402002344379999999763355312467
Q ss_pred -CCCCCC----CCEEEEECHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf -067977----716998403227758899976089953178999865677776
Q gi|254780752|r 742 -RFVAPP----GMSLIPINKWTGMLSKKGDPDTIIEAFKPGTGPAETYTVIDE 789 (817)
Q Consensus 742 -~f~~P~----~iv~~~i~~~sG~la~~~~~~~~~e~f~~gt~P~~~~~~~~~ 789 (817)
T Consensus 582 ~~~P~~~~~~~~v~~~~~~~~~~~~~~~~c~~~~~~~~~p~~~p~~~~~~~~~ 634 (786)
T TIGR02073 582 PELPRPLLVNIIVKRVPVGLVSGELKALPCPEQISTWFLPGSSPPKLSELHKP 634 (786)
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCC
T ss_conf 78878430106888504666242101334224333321368886034100124