HHsearch alignment for GI: 254780752 and conserved domain: pfam00905
>pfam00905 Transpeptidase Penicillin binding protein transpeptidase domain. The active site serine is conserved in all members of this family.
Probab=100.00 E-value=0 Score=468.61 Aligned_cols=258 Identities=31% Similarity=0.469 Sum_probs=223.4
Q ss_pred CEEEEECCCCCCCEEEEECCCCCCCC-----CCCCCCCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCEEEEECCCCEE
Q ss_conf 11664065666611787213234443-----320012335665310000127887402-466544565237880378526
Q gi|254780752|r 441 GGLIAMDPRTGRILATIGGFSYSQSE-----FNRSTQAMRQPGSCFKPIVYAAALDSG-YTPASVIMDAPIEVVSRGKIW 514 (817)
Q Consensus 441 ~a~V~id~~TG~IlA~vGg~d~~~~~-----~NrA~~~~rqpGSt~KP~vy~~Ale~G-~tp~t~~~D~p~~~~~~~~~~ 514 (817)
T Consensus 1 Ga~Vv~d~~TG~IlAm~~~p~~~~~~~~~~~~n~a~~~~~~PGStfKp~~~aaaLe~g~~~~~~~~~~~~~~~-~~--~~ 77 (296)
T pfam00905 1 GSAVVLDPKTGEVLAMAGKPSYDPNRDKEPLRNRAVQDVYEPGSTFKIFTALAALDNGILKPEETFDDWPGLP-VG--GY 77 (296)
T ss_pred CEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CC--CC
T ss_conf 9599998999929999868988978766422218766865884899999999999879988761114776434-79--93
Q ss_pred EEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC-----------------CCCCCCCC-
Q ss_conf 664127654422566666653044022588762597235211013556555676-----------------65634451-
Q gi|254780752|r 515 KPENYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADYAENFGIYDKMLP-----------------VLPMSLGA- 576 (817)
Q Consensus 515 ~p~N~~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~~~~~~-----------------~~s~alG~- 576 (817)
T Consensus 78 ~~~n~~~~~~G~~tl~~al~~S~N~~~~~l~~~lg~~~~~~~~~~~G~g~~~~~~~~~e~~g~~~~~~~~~~~~~~~G~G 157 (296)
T pfam00905 78 TIKDWNQDGSGTITLREALEYSSNWYFQQLALKLGKDKLRDYLKKFGYGNKTGIGLPGESAGILPPRYRGDGATTAWGQG 157 (296)
T ss_pred CEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECC
T ss_conf 22468999887554999998509677899999708478999999718887768888644356677755431010101067
Q ss_pred -CEEHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHH
Q ss_conf -0000377674322015744035446667641024430133585323556666666554554675543535899999999
Q gi|254780752|r 577 -GETTVLRMVSAYAVFANGGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAYQIT 655 (817)
Q Consensus 577 -~~vtpl~la~aya~~AN~G~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~~a~~~~ 655 (817)
T Consensus 158 ~~~vTplq~a~aya~iAN~G~~~~p~~v~~i~~~~~~~~--------------------------~~~~~is~~~a~~v~ 211 (296)
T pfam00905 158 SLTITPLQQAQAYATIANNGKLVPPHIVKSIKKLVDPKV--------------------------LGKLPISKSTAEKVK 211 (296)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEECCEEEEEECCCCCCCC--------------------------CCCCCCCHHHHHHHH
T ss_conf 662269999999999871996837699950014789822--------------------------234038999999999
Q ss_pred HHHHHHHHCCCEEHHCCCCCCEEEEECCCC---------CCCCEEEEEE----CCCEEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 999998734804321059960467604678---------9702279845----698799999826689827898644212
Q gi|254780752|r 656 SMLEGVIKHGTATGKVRLNRPVAGKTGTTS---------SYRDTWFIGY----TPTLVVGVYVGYDIPAPLNNHATGSTL 722 (817)
Q Consensus 656 ~~L~~vv~~GTg~~a~~~~~~iaGKTGTt~---------~~~D~WfvG~----tp~~~~~vWvG~D~~~~~~~~~~G~~~ 722 (817)
T Consensus 212 ~~l~~vv~~gt~~-~~~~~~~vaGKTGTaq~~~~~~~~~~~~~awFvG~~P~~~p~~~v~V~v~--~~~--~~~~~Gg~~ 286 (296)
T pfam00905 212 DMLKLVVNDGGGA-AAVPGYKVAGKTGTAQVAGKGGYKDGTYNGWFVGYAPADNPKYAFAVLID--DPK--GDGGAGGKV 286 (296)
T ss_pred HHHHHHCCCCCCC-CCCCCCCEEEEEECCEECCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEC--CCC--CCCCCHHHH
T ss_conf 9998507788743-34689726899825366588888788658999999987998299999986--689--899860689
Q ss_pred CHHHHHHHHH
Q ss_conf 1799999999
Q gi|254780752|r 723 TAPIFNAFMK 732 (817)
Q Consensus 723 a~piw~~~m~ 732 (817)
T Consensus 287 AaPi~~~i~~ 296 (296)
T pfam00905 287 AAPIFKDILE 296 (296)
T ss_pred HHHHHHHHHC
T ss_conf 9999999869