HHsearch results for GI: 254780752 and protein with PDBid: 1k38_A
>1k38_A Penicillinase, beta-lactamase OXA-2; serine beta-lactamase, hydrolase, antibiotic resistance, carbamylated lysine; HET: KCX; 1.50A {Salmonella typhimurium} SCOP: e.3.1.1 PDB: 3if6_A*
Probab=100.00 E-value=1.1e-41 Score=294.16 Aligned_cols=222 Identities=16% Similarity=0.162 Sum_probs=167.7
Q ss_pred CCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCEEEEECCCCEEEEE
Q ss_conf 53116640656666117872132344433200123356653100001278874024-66544565237880378526664
Q gi|254780752|r 439 VQGGLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIVYAAALDSGY-TPASVIMDAPIEVVSRGKIWKPE 517 (817)
Q Consensus 439 ~q~a~V~id~~TG~IlA~vGg~d~~~~~~NrA~~~~rqpGSt~KP~vy~~Ale~G~-tp~t~~~D~p~~~~~~~~~~~p~ 517 (817)
.+|++|+||++||+|++|+.. .||+.+ .++||||||||++++|||+|+ ++.+.+.+ . ++. .
T Consensus 19 ~~G~~vv~D~~tg~~~a~~~n-------~~~a~~-~y~PGSTfK~~~~~aaLe~G~i~~~~~~~~----~--~~~----~ 80 (254)
T 1k38_A 19 AKGTIVVADERQADRAMLVFD-------PVRSKK-RYSPASTFKIPHTLFALDAGAVRDEFQIFR----W--DGV----N 80 (254)
T ss_dssp CCEEEEEEECSSSSCCCEEES-------HHHHTC-CBCCGGGGHHHHHHHHHHHTSCCSTTCCBC----C--CSC----C
T ss_pred CCEEEEEEECCCCCEEEEECC-------HHHHCC-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCC----C--CCC----C
T ss_conf 838999998999857886149-------899668-889972899999999998498543211346----8--987----6
Q ss_pred ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC---CCCCCCCCCEEHHHHHHHHHHHCCCC
Q ss_conf 127654422566666653044022588762597235211013556555676---65634451000037767432201574
Q gi|254780752|r 518 NYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADYAENFGIYDKMLP---VLPMSLGAGETTVLRMVSAYAVFANG 594 (817)
Q Consensus 518 N~~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~~~~~~---~~s~alG~~~vtpl~la~aya~~AN~ 594 (817)
+..+.++|.++|++||++|||++|+++++++|.+++.+++++|||.+...+ ..++..|...+||+|||.+|++|||+
T Consensus 81 ~~~~~~~g~~tl~~Al~~S~N~~f~~la~~lG~~~~~~~~~~~G~G~~~~~~~~~~~~~~g~~~itPlq~a~~~~~ian~ 160 (254)
T 1k38_A 81 RGFAGHNQDQDLRSAMRNSTVWVYELFAKEIGDDKARRYLKKIDYGNADPSTSNGDYWIEGSLAISAQEQIAFLRKLYRN 160 (254)
T ss_dssp CSCTTTSSCBCHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHHTTCTTCCCCC--CCTTTTSSCCBCHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 78888899979999999739399999999819088999999859999988765344001787437599999999999769
Q ss_pred CEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEHHCCCC
Q ss_conf 40354466676410244301335853235566666665545546755435358999999999999987348043210599
Q gi|254780752|r 595 GKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAYQITSMLEGVIKHGTATGKVRLN 674 (817)
Q Consensus 595 G~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~~a~~~~~~L~~vv~~GTg~~a~~~~ 674 (817)
|.. +++.+...+.+||+.+ ...|
T Consensus 161 g~~------------------------------------------------~~~~~~~~~~~~~~~~---------~~~g 183 (254)
T 1k38_A 161 ELP------------------------------------------------FRVEHQRLVKDLMIVE---------AGRN 183 (254)
T ss_dssp CSS------------------------------------------------SCHHHHHHHHHHTEEE---------EETT
T ss_pred CEE------------------------------------------------CCHHHHHHHHHHHHHH---------HHCC
T ss_conf 940------------------------------------------------5800679999999883---------4259
Q ss_pred CCEEEEECCCCCCCCEEEEEE----CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 604676046789702279845----6987999998266898278986442121799999999997489830067
Q gi|254780752|r 675 RPVAGKTGTTSSYRDTWFIGY----TPTLVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKEALKNIPSSRFV 744 (817)
Q Consensus 675 ~~iaGKTGTt~~~~D~WfvG~----tp~~~~~vWvG~D~~~~~~~~~~G~~~a~piw~~~m~~~~~~~p~~~f~ 744 (817)
+++||||||++ +++||+|| .|.|+++|++. .+ .+..|+..+.||.+++++.+ .-+|+.+..
T Consensus 184 ~~vaGKTGTa~--~~~WFvG~~p~~~p~~~~av~i~--~~----~~~~~~~~a~~i~~~il~~l-~~lpp~p~~ 248 (254)
T 1k38_A 184 WILRAKTGWEG--RMGWWVGWVEWPTGSVFFALNID--TP----NRMDDLFKREAIVRAILRSI-EALPPNPAV 248 (254)
T ss_dssp EEEEEEEEESS--SEEEEEEEEEETTEEEEEEEEEE--CT----TGGGGTHHHHHHHHHHHHHT-TSSCC----
T ss_pred CEEEEEECCCC--CCEEEEEEEECCCCEEEEEEEEE--CC----CCCCCHHHHHHHHHHHHHHC-CCCCCCCCC
T ss_conf 75777636898--67689999986998699999997--79----99772899999999999984-899998777