HHsearch results for GI: 254780752 and protein with PDBid: 1tvf_A

>1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc target, SAV0642, PSI, protein structure initiative; 2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1
Probab=94.35  E-value=0.0076  Score=36.28  Aligned_cols=110  Identities=18%  Similarity=0.216  Sum_probs=62.6

Q ss_pred             EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---CC-CCCCCCCCCCEEEEECCCCEEEEEE
Q ss_conf             6640656666117872132344433200123356653100001278874---02-4665445652378803785266641
Q gi|254780752|r  443 LIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIVYAAALD---SG-YTPASVIMDAPIEVVSRGKIWKPEN  518 (817)
Q Consensus       443 ~V~id~~TG~IlA~vGg~d~~~~~~NrA~~~~rqpGSt~KP~vy~~Ale---~G-~tp~t~~~D~p~~~~~~~~~~~p~N  518 (817)
                      .++||..||+||.=-          |  ...+++|+|+-|.++...+||   +| +++.+.+.-++..+... ..+...+
T Consensus        37 ~~vv~~~TG~iLy~K----------N--~d~~~~pAS~TKlMTa~l~le~~~~g~l~ld~~vtis~~~~~~~-~~~~~S~  103 (369)
T 1tvf_A           37 SAVNVSQTGQLLYQY----------N--IDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMS-TLPELSN  103 (369)
T ss_dssp             EEEEEETTSBEEEEE----------S--TTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEECCHHHHHHT-TCTTSCC
T ss_pred             EEEEECCCCCEEEEE----------C--CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHC-CCCCCCC
T ss_conf             699997899294267----------8--09982878999999999999988638988344713579999734-5877761


Q ss_pred             CCCCCCC-HHHHHH----HHHHHCCHHHHHHHHHCCCC------EEEEEECCCCCCCCC
Q ss_conf             2765442-256666----66530440225887625972------352110135565556
Q gi|254780752|r  519 YSKNFSG-ASTLRF----GLEKSRNLMTVRLAHNMGMT------VVADYAENFGIYDKM  566 (817)
Q Consensus       519 ~~~~~~G-~itl~~----Al~~S~N~~~v~l~~~~G~~------~~~~~~~~~Gi~~~~  566 (817)
                      . +-..| .+|+++    .|..|.|-.++-|++.++-.      .+-+.|+++|+.+-.
T Consensus       104 ~-~l~~G~~~tv~dLL~~~li~SaNdAA~aLAe~i~Gs~~~Fv~~MN~kAkeLGm~~T~  161 (369)
T 1tvf_A          104 T-KLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTH  161 (369)
T ss_dssp             C-CCCTTCEEEHHHHHHHHHHSCCHHHHHHHHHHHSSSHHHHHHHHHHHHHHTTCTTCB
T ss_pred             E-EECCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCE
T ss_conf             2-443897975999999876447778999999870477799999999999984889875