HHsearch results for GI: 254780752 and protein with PDBid: 2bg1_A
>2bg1_A PBP1B, penicillin-binding protein 1B; peptidoglycan, peptidoglycan synthesis multifunctional enzyme, cell WALL; 1.9A {Streptococcus pneumoniae} SCOP: e.3.1.1 PDB: 2xd5_A* 2uwy_A* 2xd1_A* 2uwx_A* 2fff_B
Probab=100.00 E-value=0 Score=750.84 Aligned_cols=442 Identities=21% Similarity=0.294 Sum_probs=370.6
Q ss_pred CHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 23440302712544401576433211111466789988876665420111256888753011124454322234571567
Q gi|254780752|r 195 SVSELTIEEAAYLAALPKGPSNYDPFRKNKAAIARRNWVIDRMEENGYISQEQALVAKQKPLKITIKQRRSHLFGSEYFA 274 (817)
Q Consensus 195 ~~~dLtl~EaA~LAgi~~~Ps~y~P~~np~~a~~Rr~~VL~~M~~~g~It~~e~~~a~~~~i~~~~~~~~~~~~~a~yf~ 274 (817)
+++|||++|+|+||||+++|++++|+.+++.+..||++|+..|.+++.....++... ...+.. .++.
T Consensus 4 svseLt~~eaa~lA~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------~~~~ 70 (494)
T 2bg1_A 4 SISEITYSDGTVIASIESDMLRQDFLPSGTVTGISQDYLYFTTLAEAQERMYDYLAQ-RDNVSA------------KELK 70 (494)
T ss_dssp ----CCC-----------------------------CHHHHHHHHHHHHHHHHHHHH-HTTCCT------------TTTS
T ss_pred CHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHH------------HHHH
T ss_conf 847788999998855743411058877867887755189999999999888887764-144106------------7777
Q ss_pred HHHHHHHHHCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 99885311001243312573289852488898999999998767654443210000001211248877863332013355
Q gi|254780752|r 275 EEVRRQLIDRYGEKALYEDGLSIRTSLDPQLQLYARKALQNGLINYDQNDGFRGPIKRIDLKKDWGNTLASIPTLYDVPE 354 (817)
Q Consensus 275 e~V~~~l~~~~ge~~l~~~Gl~I~TTiD~~lQ~~Ae~ai~~~l~~~d~~~g~rg~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (817)
.....+....+.++.|+++||+||||||+++|++||+++.+.+..++.
T Consensus 71 ~~~~~~~~~~~~~~~l~~gGl~I~TTiD~~lQ~~ae~al~~~~~~~~~-------------------------------- 118 (494)
T 2bg1_A 71 NEATQKFYRDLAAKEIENGGYKITTTIDQKIHSAMQSAVADYGYLLDD-------------------------------- 118 (494)
T ss_dssp CHHHHHHHHHHHHHHHHTSCCEEEECCCHHHHHHHHHHHHHHGGGGCC--------------------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC--------------------------------
T ss_conf 778888899989999981990899671889999999877666554105--------------------------------
Q ss_pred CCCEEEEEECCCCEEEEEECCCCCCCCEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 54104765214402676520334431000024442348889665200112233321000013646310123566515775
Q gi|254780752|r 355 WDIAVVLEVSNSHITIGIRPTIDSNGKVTTERKKGIIEADSMRWVYNKEQTTEETSENRNVLSLGDVIYVEHINEGWRLR 434 (817)
Q Consensus 355 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~i~~~~~~~~l~ 434 (817)
T Consensus 119 -------------------------------------------------------------------------------- 118 (494)
T 2bg1_A 119 -------------------------------------------------------------------------------- 118 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred ECCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH-HHHHHHCCC-CCCCCCCCCEEEEECCCC
Q ss_conf 225553116640656666117872132344433200123356653100001-278874024-665445652378803785
Q gi|254780752|r 435 QIPKVQGGLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIV-YAAALDSGY-TPASVIMDAPIEVVSRGK 512 (817)
Q Consensus 435 ~~p~~q~a~V~id~~TG~IlA~vGg~d~~~~~~NrA~~~~rqpGSt~KP~v-y~~Ale~G~-tp~t~~~D~p~~~~~~~~ 512 (817)
....+|+|+|+|||+||+|||||||++|..++||||+|+.||||||||||+ |++|||+|+ ++.+++.|.|..+.+
T Consensus 119 ~~~~~~~a~Vv~d~~TG~IlAmvgg~~y~~~~~Nra~~~~rqPGStfKP~v~yaaAle~g~~~~~t~~~d~p~~~~~--- 195 (494)
T 2bg1_A 119 GTGRVEVGNVLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILSNYPTNFAN--- 195 (494)
T ss_dssp SSSSCEEEEEEEETTTCBEEEEECCSCTTTCCCCTTTTCCBCCGGGGHHHHTHHHHHHTTSCCTTCEEECSCCBCTT---
T ss_pred CCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECC---
T ss_conf 67761599999989999099999898999776567570886872239999999999976999975555788721136---
Q ss_pred EEEEEEC-CCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCE--EEEEECCCCCCCCCCCCCCCCCCCC-EEHHHHHHHHH
Q ss_conf 2666412-765442256666665304402258876259723--5211013556555676656344510-00037767432
Q gi|254780752|r 513 IWKPENY-SKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTV--VADYAENFGIYDKMLPVLPMSLGAG-ETTVLRMVSAY 588 (817)
Q Consensus 513 ~~~p~N~-~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~--~~~~~~~~Gi~~~~~~~~s~alG~~-~vtpl~la~ay 588 (817)
|.|.|+ ++.++|.+++++||++|||++++++.+.+|... ...++++||+..+.....++++|.. ++||+|||+||
T Consensus 196 -~~~~~~~~~~~~G~vtl~~al~~S~Ni~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~a~Gg~~~vTplqma~ay 274 (494)
T 2bg1_A 196 -GNPIMYANSKGTGMMTLGEALNYSWNIPAYWTYRMLRENGVDVKGYMEKMGYEIPEYGIESLPMGGGIEVTVAQHTNGY 274 (494)
T ss_dssp -SCBCCBTTBCCCCEEEHHHHHHHTCSHHHHHHHHHHHHTTCCHHHHHHHTTCCCSCCCCTTGGGTTTCCBCHHHHHHHH
T ss_pred -CCCEECCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHH
T ss_conf -6742446787874468999986374618888898854442433444413577887666221001687554206888999
Q ss_pred HHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 20157440354466676410244301335853235566666665545546755435358999999999999987348043
Q gi|254780752|r 589 AVFANGGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAYQITSMLEGVIKHGTAT 668 (817)
Q Consensus 589 a~~AN~G~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~~a~~~~~~L~~vv~~GTg~ 668 (817)
++|||+|++++||+|++|+|++|++|+++++ ..+||+|+++|++|++||++||+.|||+
T Consensus 275 at~AN~G~~~~P~~i~~i~d~~G~~i~~~~~---------------------~~~~v~s~~~a~~~~~~L~~vv~~gt~~ 333 (494)
T 2bg1_A 275 QTLANNGVYHQKHVISKIEAADGRVVYEYQD---------------------KPVQVYSKATATIMQGLLREVLSSRVTT 333 (494)
T ss_dssp HHHHTTTEECCCBSEEEEECTTSCEEEECCC---------------------CCEECSCHHHHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHCCEECCCEEEEEEECCCCCCCCCCCC---------------------CCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9997298252545654588899987234578---------------------7401478889999999999987224330
Q ss_pred HH---------CCCCCCEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC---
Q ss_conf 21---------059960467604678970227984569879999982668982789864421217999999999974---
Q gi|254780752|r 669 GK---------VRLNRPVAGKTGTTSSYRDTWFIGYTPTLVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKEALK--- 736 (817)
Q Consensus 669 ~a---------~~~~~~iaGKTGTt~~~~D~WfvG~tp~~~~~vWvG~D~~~~~~~~~~G~~~a~piw~~~m~~~~~--- 736 (817)
.+ ...++++|||||||++++|+||+||+|+|+++||||||++++++ ..+|++.++|||++||+.+++
T Consensus 334 ~~~~~~~~~~~~~~~~~vAGKTGTt~~~~DaWfvGytp~~~~~vWvG~d~~~~~~-~~~G~~~a~~~~~~i~~~~~~~~~ 412 (494)
T 2bg1_A 334 TFKSNLTSLNPTLANADWIGKTGTTNQDENMWLMLSTPRLTLGGWIGHDDNHSLS-QQAGYSNNSNYMAHLVNAIQQASP 412 (494)
T ss_dssp CHHHHHHHHCHHHHTSCCEEEEECCTTCSEEEEEEECSSEEEEEEEECTTCCCCC-TTTTTTHHHHHHHHHHHHHHHHST
T ss_pred CHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 0003654445555898626866589997237999747993699999689998676-664754138999999999987470
Q ss_pred -CCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf -8983006797771699840322775889997608995317899986567777
Q gi|254780752|r 737 -NIPSSRFVAPPGMSLIPINKWTGMLSKKGDPDTIIEAFKPGTGPAETYTVID 788 (817)
Q Consensus 737 -~~p~~~f~~P~~iv~~~i~~~sG~la~~~~~~~~~e~f~~gt~P~~~~~~~~ 788 (817)
+.+.++|+.|++|++++||..||++|++.|++. .|+|.+|++|++.|....
T Consensus 413 ~~~~~~~f~~P~~vv~~~v~~~tG~l~~~~~~~~-~~~~~~g~~~~~~~~~~~ 464 (494)
T 2bg1_A 413 SIWGNERFALDPSVVKSEVLKSTGQKPGKVSVEG-KEVEVTGSTVTSYWANKS 464 (494)
T ss_dssp TSSCSCCCCCCTTCEEEEEETTTSSBCEEEECSS-SEEEECCCEEEEEESSSS
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC-EEEECCCCCEEEHHCCCC
T ss_conf 3477678899998489998733277898889887-587268994305110489