HHsearch results for GI: 254780752 and protein with PDBid: 2iwb_A
>2iwb_A Methicillin resistance MECR1 protein; antibiotic resistance, bacterial antibiotic resistance, methicillin resistance, beta-lactamic antibiotics, MRSA; 1.8A {Staphylococcus aureus} PDB: 2iwc_A* 2iwd_A*
Probab=100.00 E-value=8.8e-39 Score=274.87 Aligned_cols=212 Identities=15% Similarity=0.160 Sum_probs=160.9
Q ss_pred CCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCEEEEECCCCEEEEE
Q ss_conf 53116640656666117872132344433200123356653100001278874024-66544565237880378526664
Q gi|254780752|r 439 VQGGLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIVYAAALDSGY-TPASVIMDAPIEVVSRGKIWKPE 517 (817)
Q Consensus 439 ~q~a~V~id~~TG~IlA~vGg~d~~~~~~NrA~~~~rqpGSt~KP~vy~~Ale~G~-tp~t~~~D~p~~~~~~~~~~~p~ 517 (817)
.+|++|++|++||+|+++ + .||+.+ +++||||||||++++|||+|+ ++++.+.+. + . .+
T Consensus 22 ~~G~~v~~d~~tg~~~~~------n---~~~~~~-~y~PGStfK~~t~~aaLe~g~~~~~~~~~~~-----~--~---~~ 81 (246)
T 2iwb_A 22 FDGSFVLYNEREQAYSIY------N---EPESKQ-RYSPNSTYKIYLALMAFDQNLLSLNHTEQQW-----D--K---HQ 81 (246)
T ss_dssp SEEEEEEEETTTTEEEEE------S---HHHHTB-CBCCGGGGHHHHHHHHHHTTSSBTTBCCBCC-----C--C---CC
T ss_pred CCEEEEEEECCCCCEEEE------C---HHHHCC-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-----C--C---CC
T ss_conf 734699997899967605------8---889668-7799636999999999984997885434169-----9--8---66
Q ss_pred ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC--CCCCCCCCEEHHHHHHHHHHHCCCCC
Q ss_conf 1276544225666666530440225887625972352110135565556766--56344510000377674322015744
Q gi|254780752|r 518 NYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADYAENFGIYDKMLPV--LPMSLGAGETTVLRMVSAYAVFANGG 595 (817)
Q Consensus 518 N~~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~~~~~~~--~s~alG~~~vtpl~la~aya~~AN~G 595 (817)
+....++|.++|++||++|||++++++++++|.+++.+++++|||.....+. .++..|...+||+|||++|++|||+|
T Consensus 82 ~~~~~~~g~~~l~~Al~~S~N~~~~~la~~lG~~~~~~~~~~~G~g~~~~~~~~~~~~~g~~~iTPlqma~~~~~ian~g 161 (246)
T 2iwb_A 82 YPFKEWNQDQNLNSSMKYSVNWYYENLNKHLRQDEVKSYLDLIEYGNEEISGNENYWNESSLKISAIEQVNLLKNMKQHN 161 (246)
T ss_dssp CSSGGGSSCBCHHHHHHTTCHHHHHHHHTTSCHHHHHHHHHHHTCTTCCCCSCSSTTSSSSCCBCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 17898899707788422456299999998728607899999828999988987642226875256999999999998389
Q ss_pred EEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEHHCCCCC
Q ss_conf 03544666764102443013358532355666666655455467554353589999999999999873480432105996
Q gi|254780752|r 596 KQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAYQITSMLEGVIKHGTATGKVRLNR 675 (817)
Q Consensus 596 ~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~~a~~~~~~L~~vv~~GTg~~a~~~~~ 675 (817)
.. ++|+++..+.++|+.++ ..+.
T Consensus 162 ~~------------------------------------------------~~p~~~~~~~~~~~~~~---------~~~~ 184 (246)
T 2iwb_A 162 MH------------------------------------------------FDNKAIEKVENSMTLKQ---------KDTY 184 (246)
T ss_dssp SS------------------------------------------------SCHHHHHHHHHHTEEEE---------CSSE
T ss_pred CC------------------------------------------------CCCHHHHHHHHHHHHHH---------HHHH
T ss_conf 67------------------------------------------------88325567777777765---------4234
Q ss_pred CEEEEECC--CCC-CCCEEEEEE----CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 04676046--789-702279845----698799999826689827898644212179999999999
Q gi|254780752|r 676 PVAGKTGT--TSS-YRDTWFIGY----TPTLVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKEA 734 (817)
Q Consensus 676 ~iaGKTGT--t~~-~~D~WfvG~----tp~~~~~vWvG~D~~~~~~~~~~G~~~a~piw~~~m~~~ 734 (817)
.++||||| +++ ..++||+|| .|+|+++|++-.+ ...|+..|+||+++||+.+
T Consensus 185 ~~~~ktgTg~~~~~~~~aWFvGf~p~~~p~~~~~v~v~~~-------~~~~~~~A~pi~~~Il~~l 243 (246)
T 2iwb_A 185 KYVGKTGTGIVNHKEANGWFVGYVETKDNTYYFATHLKGE-------DNANGEKAQQISERILKEM 243 (246)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEESSCEEEEEEEEECS-------SCBCHHHHHHHHHHHHHHT
T ss_pred HHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECC-------CCCCCHHHHHHHHHHHHHC
T ss_conf 4321101044689887889999998899959999999789-------9887478999999999971