HHsearch results for GI: 254780752 and protein with PDBid: 2v2f_F

>2v2f_F Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc6_B* 2zc5_B* 2c6w_B 2c5w_B*
Probab=100.00  E-value=0  Score=608.66  Aligned_cols=355  Identities=22%  Similarity=0.325  Sum_probs=306.3

Q ss_pred             CCHHHHHHHHHHHHHCCCHH---HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHH
Q ss_conf             57156799885311001243---312573289852488898999999998767654443210000001211248877863
Q gi|254780752|r  269 GSEYFAEEVRRQLIDRYGEK---ALYEDGLSIRTSLDPQLQLYARKALQNGLINYDQNDGFRGPIKRIDLKKDWGNTLAS  345 (817)
Q Consensus       269 ~a~yf~e~V~~~l~~~~ge~---~l~~~Gl~I~TTiD~~lQ~~Ae~ai~~~l~~~d~~~g~rg~~~~~~~~~~~~~~~~~  345 (817)
                      ..|||+|+|++|+++++.++   +++++|++||||||.++|+++|+++++......                        
T Consensus         4 ~yp~y~d~v~~e~i~~~~~~~~~~l~~~G~~I~tTiD~~~Q~~~e~~l~~~~~~~~------------------------   59 (390)
T 2v2f_F            4 NYPAYMDNYLKEVINQVEQETGYNLLTTGMDVYTNVDQEAQKHLWDIYNSDQYVSY------------------------   59 (390)
T ss_dssp             -CCGGGHHHHHHHHHHHHHHHSCCTTTSCEEEEECCCHHHHHHHHHHHHSSSSCCC------------------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCC------------------------
T ss_conf             56299999999999988776412644699889947889999999999975344216------------------------


Q ss_pred             HHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             33201335554104765214402676520334431000024442348889665200112233321000013646310123
Q gi|254780752|r  346 IPTLYDVPEWDIAVVLEVSNSHITIGIRPTIDSNGKVTTERKKGIIEADSMRWVYNKEQTTEETSENRNVLSLGDVIYVE  425 (817)
Q Consensus       346 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~i~  425 (817)
                                                                                                      
T Consensus        60 --------------------------------------------------------------------------------   59 (390)
T 2v2f_F           60 --------------------------------------------------------------------------------   59 (390)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCCCEEEEEECCCCCCEEEEECCCCCCCEEEEECCCCCCC---CCCCCCCCCCCCCCCCHHHH-HHHHHHCCC-CC-CCC
Q ss_conf             5665157752255531166406566661178721323444---33200123356653100001-278874024-66-544
Q gi|254780752|r  426 HINEGWRLRQIPKVQGGLIAMDPRTGRILATIGGFSYSQS---EFNRSTQAMRQPGSCFKPIV-YAAALDSGY-TP-ASV  499 (817)
Q Consensus       426 ~~~~~~~l~~~p~~q~a~V~id~~TG~IlA~vGg~d~~~~---~~NrA~~~~rqpGSt~KP~v-y~~Ale~G~-tp-~t~  499 (817)
                               ....+|+|+|+|||+||+||||+|+++|..+   .+|||+++.||||||||||+ |++|||+|+ .+ .++
T Consensus        60 ---------~~~~~~~a~vv~d~~TG~IlA~vg~~~~~~~~~~~~N~a~~~~~~pGStfKp~~~~aaale~g~~~~~~~~  130 (390)
T 2v2f_F           60 ---------PDDDLQVASTVVDVSNGKVIAQLGARHQASNVSFGTNQAVETNRDWGSAMKPITDYAPAIEYGVYDSTATM  130 (390)
T ss_dssp             ---------SSSCCEEEEEEEETTTTEEEEEECCCC-----CCCCCTTTCCCSCCGGGGHHHHTHHHHHHTTSCSBTTCE
T ss_pred             ---------CCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             ---------78770489999988999499999678777676556432220566887417799999999976986664057


Q ss_pred             CCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCC-------CCCCCC
Q ss_conf             5652378803785266641276544225666666530440225887625972352110135565556-------766563
Q gi|254780752|r  500 IMDAPIEVVSRGKIWKPENYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADYAENFGIYDKM-------LPVLPM  572 (817)
Q Consensus       500 ~~D~p~~~~~~~~~~~p~N~~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~~~~-------~~~~s~  572 (817)
                      +.|.|+.+..  ..|.++||++.++|.+++++||++|||++|+++++++|.+++.+++++|||..+.       ....++
T Consensus       131 ~~~~~~~~~~--~~~~~~n~~~~~~G~vtl~~Al~~S~N~~~~~l~~~~G~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  208 (390)
T 2v2f_F          131 VNDIPYNYPG--TSTPVYNWDRAYFGNITLQYALQQSRNVTAVETLNKVGLDRAKTFLNGLGIDYPSMHYANAISSNTTE  208 (390)
T ss_dssp             EEESCEECTT--SSCEECCTTSCCCEEEEHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHTTTCCCSSCCGGGGSCSCSSC
T ss_pred             ECCCCCCCCC--CCCCCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
T ss_conf             5267610157--99874307998577422999998633037889987539278999999829998764444222321110


Q ss_pred             CCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHH
Q ss_conf             44510000377674322015744035446667641024430133585323556666666554554675543535899999
Q gi|254780752|r  573 SLGAGETTVLRMVSAYAVFANGGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAY  652 (817)
Q Consensus       573 alG~~~vtpl~la~aya~~AN~G~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~~a~  652 (817)
                      ++|..++||+|||++|++|||+|++++||+|++|+|.+|+++.. .                     +...||+|+++|+
T Consensus       209 ~~g~~~vtplqma~ayaaiaN~G~~~~P~~v~~i~d~~g~~~~~-~---------------------~~~~~v~~~~~a~  266 (390)
T 2v2f_F          209 SNKQYGASSEKMAAAYAAFANGGIYHKPMYINKVVFSDGSKKEF-S---------------------DVGTRAMKETTAY  266 (390)
T ss_dssp             CCTTSSCCHHHHHHHHHHHHTTSEECCCBCEEEEEETTSCEEEC-C---------------------CCCEECSCHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHCCCEEECCEEEEEEEECCCCCEEC-C---------------------CCCCCCCCHHHHH
T ss_conf             58640458999999999986498670678877798548860022-5---------------------6443455389999


Q ss_pred             HHHHHHHHHHHCCCEEHHCCCCCCEEEEECCCCCC---------------CCEEEEEECCCEEEEEEEECCCCCCCCCCC
Q ss_conf             99999999873480432105996046760467897---------------022798456987999998266898278986
Q gi|254780752|r  653 QITSMLEGVIKHGTATGKVRLNRPVAGKTGTTSSY---------------RDTWFIGYTPTLVVGVYVGYDIPAPLNNHA  717 (817)
Q Consensus       653 ~~~~~L~~vv~~GTg~~a~~~~~~iaGKTGTt~~~---------------~D~WfvG~tp~~~~~vWvG~D~~~~~~~~~  717 (817)
                      ++++||+.||+.|||+++...++++||||||+|++               +|+||+||+|+|+++||||+|++... ..+
T Consensus       267 ~~~~~l~~vv~~GT~~~a~~~~~~vaGKTGTaq~~~~~~~~~~~~~~~~~~d~wfvG~~P~~~~~VwvG~~~~~~~-~~~  345 (390)
T 2v2f_F          267 MMTEMMKTVLAYGTGRGAYLPWLAQAGKTGTSNYTDDEIEKHIKNTGYVAPDEMFVGYTRKYSMAVWTGYSNRLTP-IVG  345 (390)
T ss_dssp             HHHHHHHHHHHTSTTGGGCCTTSCCEEEEEECCCCC-----------CCBSEEEEEEECSSEEEEEEEECSSTTSC-BCG
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCC-CCC
T ss_conf             9999876460267631102799707898147667777653334556777664699997899799999941799888-688


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEE-EECHHHCCC
Q ss_conf             44212179999999999748983006797771699-840322775
Q gi|254780752|r  718 TGSTLTAPIFNAFMKEALKNIPSSRFVAPPGMSLI-PINKWTGML  761 (817)
Q Consensus       718 ~G~~~a~piw~~~m~~~~~~~p~~~f~~P~~iv~~-~i~~~sG~l  761 (817)
                      +|++.|+|||++||+.++++.+.++|+.|+||++. .+|..+|++
T Consensus       346 ~G~~~aapi~~~i~~~~~~~~~~~~f~~P~gv~~~~~~~~~~g~~  390 (390)
T 2v2f_F          346 DGFLVAAKVYRSMITYLSEGSNPEDWNIPEGLYRNGEFVFKNGAR  390 (390)
T ss_dssp             GGGGHHHHHHHHHHHHHHTTC-CCCCCCCTTEEEETTEEEEC---
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCC
T ss_conf             732799999999999996369977799999815803799716879