HHsearch results for GI: 254780752 and protein with PDBid: 3equ_A
>3equ_A PBP-2, penicillin-binding protein 2; class B transpeptidase, cell division, cell inner membrane, cell membrane, cell shape; HET: SEP; 2.40A {Neisseria gonorrhoeae} PDB: 3eqv_A*
Probab=100.00 E-value=0 Score=463.39 Aligned_cols=264 Identities=27% Similarity=0.416 Sum_probs=222.3
Q ss_pred CCEEEEECCCCCCCEEEEECCCCCCCC---------CCCCCCCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCEEEEEC
Q ss_conf 311664065666611787213234443---------320012335665310000127887402-4665445652378803
Q gi|254780752|r 440 QGGLIAMDPRTGRILATIGGFSYSQSE---------FNRSTQAMRQPGSCFKPIVYAAALDSG-YTPASVIMDAPIEVVS 509 (817)
Q Consensus 440 q~a~V~id~~TG~IlA~vGg~d~~~~~---------~NrA~~~~rqpGSt~KP~vy~~Ale~G-~tp~t~~~D~p~~~~~ 509 (817)
.+++|+|||+||+|+||++.++|+.+. +|||+++.+|||||||||++++||+.| .++.+.+.+.+..+
T Consensus 223 ~g~~vv~d~~tG~IlAm~s~p~~d~~~~~~~~~~~~~Nra~~~~y~PGStfK~~t~~aal~~g~~~~~~~~~~~~~~~-- 300 (542)
T 3equ_A 223 AGTVVVLDARTGEILALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNTQPYKI-- 300 (542)
T ss_dssp EEEEEEEETTTCBEEEEEEESCCCTTSGGGCCHHHHCCHHHHCCBCCGGGGHHHHHHHHHHHTSSCTTCEEECCCEEE--
T ss_pred CCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCEECCEECCCCCCCC--
T ss_conf 634898506778367642677666221235663112434440767784266689999998569630330114577534--
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC-------------------
Q ss_conf 7852666412765442256666665304402258876259723521101355655567665-------------------
Q gi|254780752|r 510 RGKIWKPENYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADYAENFGIYDKMLPVL------------------- 570 (817)
Q Consensus 510 ~~~~~~p~N~~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~~~~~~~~------------------- 570 (817)
|.++|++..++|.+++++||++|||++|+++++++|.+++.+++++|||..+...++
T Consensus 301 ----~~~~~~~~~~~G~~~l~~al~~S~N~~~~~l~~~~g~~~~~~~~~~fG~g~~t~idlp~e~~~~~~~~~~~~~~~~ 376 (542)
T 3equ_A 301 ----GPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRMHSGFPGETAGLLRNWRRWRPIEQ 376 (542)
T ss_dssp ----TTEEECCSSCCSEEEHHHHHHHTCHHHHHHHHTTSCHHHHHHHHHHTTTTSCCCCSCTTCCCCBCCCGGGCCHHHH
T ss_pred ----CCCCCCCCCCCCCCCHHHHHHCCCEEHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf ----4321123367784248998541745154578887295889999997499865689987543454344334673112
Q ss_pred -CCCCCC-CEEHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCH
Q ss_conf -634451-000037767432201574403544666764102443013358532355666666655455467554353589
Q gi|254780752|r 571 -PMSLGA-GETTVLRMVSAYAVFANGGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDP 648 (817)
Q Consensus 571 -s~alG~-~~vtpl~la~aya~~AN~G~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~ 648 (817)
.+++|+ ..+||||||++|++|||+|.+++||++++|.+.+| ++++++
T Consensus 377 ~~~~~Gqg~~~Tplq~a~~~a~iaN~G~~~~p~~v~~i~~~~~-------------------------------~~~~~~ 425 (542)
T 3equ_A 377 ATMSFGYGLQLSLLQLARAYTALTHDGVLLPLSFEKQAVAPQG-------------------------------KRIFKE 425 (542)
T ss_dssp HHHHTTCSCBBCHHHHHHHHHHHHTTTEECCCBSBCCSSCCCC-------------------------------EECSCH
T ss_pred HHHCCCCCCCCCHHHHHHHHHEEEECCEEEEEEEEEECCCCCC-------------------------------CCCCCH
T ss_conf 2320477656888998555232520878998765442027877-------------------------------532447
Q ss_pred HHHHHHHHHHHHHHH-CCCEEHHCCCCCCEEEEECCCCCC---------CCEEEEEECC----CEEEEEEEECCCCCCCC
Q ss_conf 999999999999873-480432105996046760467897---------0227984569----87999998266898278
Q gi|254780752|r 649 MTAYQITSMLEGVIK-HGTATGKVRLNRPVAGKTGTTSSY---------RDTWFIGYTP----TLVVGVYVGYDIPAPLN 714 (817)
Q Consensus 649 ~~a~~~~~~L~~vv~-~GTg~~a~~~~~~iaGKTGTt~~~---------~D~WfvG~tp----~~~~~vWvG~D~~~~~~ 714 (817)
++++.|++||++||+ +|||+++...+++|||||||++.. .++||+||+| +|+++||| |+++ +
T Consensus 426 ~~a~~i~~~l~~Vv~~~GTg~~a~~~g~~vaGKTGTAq~~~~g~~~~~~~~awFvGy~P~~~p~~av~V~v--~~~~--~ 501 (542)
T 3equ_A 426 STAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKFVNGRYADNKHVATFIGFAPAKNPRVIVAVTI--DEPT--A 501 (542)
T ss_dssp HHHHHHHHHHHHHHSTTSSCGGGCCTTSCCEEEEEEC-----------CCEEEEEEEESSSSCCEEEEEEE--ESCC--S
T ss_pred HHHHHHHHHHHHEECCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEE--ECCC--C
T ss_conf 78999998998637279818720579954899920001567885578984699999988799859999999--4289--8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCC--C-CCCCCC
Q ss_conf 98644212179999999999748--9-830067
Q gi|254780752|r 715 NHATGSTLTAPIFNAFMKEALKN--I-PSSRFV 744 (817)
Q Consensus 715 ~~~~G~~~a~piw~~~m~~~~~~--~-p~~~f~ 744 (817)
.+.+||..|+|||++||+.+++. . |.++++
T Consensus 502 ~g~~G~~~AaPi~~~i~~~~l~~~~~~p~~~~~ 534 (542)
T 3equ_A 502 HGYYGGVVAGPPFKKIMGGSLNILGISPTKPLT 534 (542)
T ss_dssp SCCCHHHHTHHHHHHHHHHHHHHTTCCCSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 987567899999999999999976989789988