PSIBLAST alignment of GI: 254780752 and protein with PDB id: 2c5w

>gi|85544361|pdb|2C5W|B Chain B, Penicillin-Binding Protein 1a (Pbp-1a) Acyl-Enzyme Complex (Cefotaxime) From Streptococcus Pneumoniae Length = 385
 Score =  139 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/359 (20%), Positives = 137/359 (38%), Gaps = 55/359 (15%)

Query: 422 IYVEHINEGWRLRQIPKVQGGLIAMDPRTGRILATIGGFSYSQSE---FNRSTQAMRQPG 478
           ++  +  + +      ++Q     +D   G+++A +G    S +     N++ +  R  G
Sbjct: 45  LWDIYNTDEYVAYPDDELQVASTIVDVSNGKVIAQLGARHQSSNVSFGINQAVETNRDWG 104

Query: 479 SCFKPIVYA-AALDSG--YTPASVIMDAPIEVVSRGKIWKPENYSKNFSGASTLRFGLEK 535
           S  KPI     AL+ G   + A+++ D P             N+ + + G  TL++ L++
Sbjct: 105 STMKPITDYAPALEYGVYESTATIVHDEPYNYPGTNTP--VYNWDRGYFGNITLQYALQQ 162

Query: 536 SRNLMTVRLAHNMGMTVVADYAENFGIYDKMLPVLPMSLGAGETTVLR--------MVSA 587
           SRN+  V   + +G+     +    GI    +     ++ +  T   +        M +A
Sbjct: 163 SRNVPAVETLNKVGLNRAKTFLNGLGIDYPSIHY-SNAISSNTTESDKKYGASSEKMAAA 221

Query: 588 YAVFANGGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLD 647
           YA FANGG   +P +I ++    G                       E E  +   + + 
Sbjct: 222 YAAFANGGTYYKPMYIHKVVFSDG----------------------SEKEFSNVGTRAMK 259

Query: 648 PMTAYQITSMLEGVIKHGTATGKVRLNRPVAGKTGTTS------SYR---------DTWF 692
             TAY +T M++ V+ +GT         P AGKTGT++                  D  F
Sbjct: 260 ETTAYMMTDMMKTVLTYGTGRNAYLAWLPQAGKTGTSNYTDEEIENHIKTSQFVAPDELF 319

Query: 693 IGYTPTLVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKEALKNIPSSRFVAPPGMSL 751
            GYT    + V+ GY           G T+ A ++ + M    +      +  P G+  
Sbjct: 320 AGYTRKYSMAVWTGY-SNRLTPLVGNGLTVAAKVYRSMMTYLSEGSNPEDWNIPEGLYR 377