HHsearch alignment of GI: 254780753 and MMDB domain: 1gqe_A_121-231_315-365
>1gqe_A (A:121-231,A:315-365) Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli}
Probab=100.00 E-value=0 Score=436.08 Aligned_cols=161 Identities=61% Similarity=1.023 Sum_probs=154.9
Q ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHEEECCEEE
Q ss_conf 34576624899821778702778999999989999877531134442054545850134688505561000001012068
Q gi|254780753|r 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 (355)
Q Consensus 110 ~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e~~GiK~~~~~I~G~~ayg~Lk~E~GvHR 189 (355)
||+|.+||+|||+||+||+||++||++||+||++||+++||++++++.++++.+|||+|++.|+|++||++||+|+||||
T Consensus 1 g~~D~~~~ileI~aG~GG~Ea~~fa~~Ll~mY~~~a~~~g~~~evi~~~~~~~~G~ksv~~~i~G~~ay~~lk~E~GvHr 80 (162)
T 1gqe_A 1 GEYDSADCYLDIQAGSGGTEAQDWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHR 80 (162)
T ss_dssp STTTTSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSSEEEEEEEEESTTHHHHHGGGCEEEE
T ss_pred CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCEE
T ss_conf 96555671599970797699999999999999999998698799867777653555236763147654321110466135
Q ss_pred EEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH
Q ss_conf 98730466665035668878850344222111234550369985388865544273100358874697477665555522
Q gi|254780753|r 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 (355)
Q Consensus 190 v~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq~vn~t~savri~H~ptgi~v~~q~~rsq 269 (355)
|||+|||+++||||||||+|+|+|++++..+
T Consensus 81 v~r~s~~~~~~rr~Ts~a~V~VlP~~~e~~~------------------------------------------------- 111 (162)
T 1gqe_A 81 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDID------------------------------------------------- 111 (162)
T ss_dssp EEEECTTSSSCCEEEEEEEEEEEECCBTTBC-------------------------------------------------
T ss_pred EEECCCCCCCCCEEEEEEEEEEECCCCCCCC-------------------------------------------------
T ss_conf 6644898888847876667888568887653-------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEECCHHHHHCCCHHHHHHH
Q ss_conf 46799999999999999999999999999874133233222101301585683311114725079778718977999999
Q gi|254780753|r 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 (355)
Q Consensus 270 ~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~iRtY~~~p~~~v~DhR~~~~~~~~~~vl~G~ld~~i~a 349 (355)
.+++||+||||||| ||+||||||||++++|+++||+|+||+||+|
T Consensus 112 ----------------------------------~~~~~~~~iRtY~~-~~~rv~DhR~~~~~~~~~~vl~G~l~~~i~~ 156 (162)
T 1gqe_A 112 ----------------------------------SDIGWGSQIRSYVL-DDSRIKDLRTGVETRNTQAVLDGSLDQFIEA 156 (162)
T ss_dssp ----------------------------------CCCCSCSEEEEEEG-GGTEEEETTTCCEESCHHHHHTTCCHHHHHH
T ss_pred ----------------------------------HCCCCCCCCCCCCC-CCCCCCCCCCCCEECCHHHHHCCCHHHHHHH
T ss_conf ----------------------------------12535487656658-9981520056974577578758775999999
Q ss_pred HHHCC
Q ss_conf 97225
Q gi|254780753|r 350 TLAIK 354 (355)
Q Consensus 350 ~l~~~ 354 (355)
++.|+
T Consensus 157 ~~~~~ 161 (162)
T 1gqe_A 157 SLKAG 161 (162)
T ss_dssp HHHTT
T ss_pred HHHCC
T ss_conf 99776