HHsearch alignment of GI: 254780753 and MMDB domain: 1gqe_A_121-231_315-365

>1gqe_A (A:121-231,A:315-365) Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli}
Probab=100.00  E-value=0  Score=436.08  Aligned_cols=161  Identities=61%  Similarity=1.023  Sum_probs=154.9

Q ss_pred             CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHEEECCEEE
Q ss_conf             34576624899821778702778999999989999877531134442054545850134688505561000001012068
Q gi|254780753|r  110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR  189 (355)
Q Consensus       110 ~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e~~GiK~~~~~I~G~~ayg~Lk~E~GvHR  189 (355)
                      ||+|.+||+|||+||+||+||++||++||+||++||+++||++++++.++++.+|||+|++.|+|++||++||+|+||||
T Consensus         1 g~~D~~~~ileI~aG~GG~Ea~~fa~~Ll~mY~~~a~~~g~~~evi~~~~~~~~G~ksv~~~i~G~~ay~~lk~E~GvHr   80 (162)
T 1gqe_A            1 GEYDSADCYLDIQAGSGGTEAQDWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHR   80 (162)
T ss_dssp             STTTTSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSSEEEEEEEEESTTHHHHHGGGCEEEE
T ss_pred             CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCEE
T ss_conf             96555671599970797699999999999999999998698799867777653555236763147654321110466135


Q ss_pred             EEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH
Q ss_conf             98730466665035668878850344222111234550369985388865544273100358874697477665555522
Q gi|254780753|r  190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ  269 (355)
Q Consensus       190 v~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq~vn~t~savri~H~ptgi~v~~q~~rsq  269 (355)
                      |||+|||+++||||||||+|+|+|++++..+                                                 
T Consensus        81 v~r~s~~~~~~rr~Ts~a~V~VlP~~~e~~~-------------------------------------------------  111 (162)
T 1gqe_A           81 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDID-------------------------------------------------  111 (162)
T ss_dssp             EEEECTTSSSCCEEEEEEEEEEEECCBTTBC-------------------------------------------------
T ss_pred             EEECCCCCCCCCEEEEEEEEEEECCCCCCCC-------------------------------------------------
T ss_conf             6644898888847876667888568887653-------------------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEECCHHHHHCCCHHHHHHH
Q ss_conf             46799999999999999999999999999874133233222101301585683311114725079778718977999999
Q gi|254780753|r  270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA  349 (355)
Q Consensus       270 ~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~iRtY~~~p~~~v~DhR~~~~~~~~~~vl~G~ld~~i~a  349 (355)
                                                        .+++||+||||||| ||+||||||||++++|+++||+|+||+||+|
T Consensus       112 ----------------------------------~~~~~~~~iRtY~~-~~~rv~DhR~~~~~~~~~~vl~G~l~~~i~~  156 (162)
T 1gqe_A          112 ----------------------------------SDIGWGSQIRSYVL-DDSRIKDLRTGVETRNTQAVLDGSLDQFIEA  156 (162)
T ss_dssp             ----------------------------------CCCCSCSEEEEEEG-GGTEEEETTTCCEESCHHHHHTTCCHHHHHH
T ss_pred             ----------------------------------HCCCCCCCCCCCCC-CCCCCCCCCCCCEECCHHHHHCCCHHHHHHH
T ss_conf             ----------------------------------12535487656658-9981520056974577578758775999999


Q ss_pred             HHHCC
Q ss_conf             97225
Q gi|254780753|r  350 TLAIK  354 (355)
Q Consensus       350 ~l~~~  354 (355)
                      ++.|+
T Consensus       157 ~~~~~  161 (162)
T 1gqe_A          157 SLKAG  161 (162)
T ss_dssp             HHHTT
T ss_pred             HHHCC
T ss_conf             99776