HHsearch alignment of GI: 254780753 and MMDB domain: 2b3t_B_84-214_295-336
>2b3t_B (B:84-214,B:295-336) RF-1, peptide chain release factor 1; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli}
Probab=100.00 E-value=0 Score=458.62 Aligned_cols=168 Identities=33% Similarity=0.481 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEC
Q ss_conf 77401589988763034576624899821778702778999999989999877531134442054545850134688505
Q gi|254780753|r 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 (355)
Q Consensus 95 l~~~le~LE~~~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e~~GiK~~~~~I~G 174 (355)
+....++|++.+||++|+|.+||+|||+||+||+||+|||+||||||++||+++||++++++.++++.||||+|++.|+|
T Consensus 6 ~~~l~~~l~~~ll~~~~~D~~~a~leI~aG~GG~EA~~fa~~L~~MY~~~a~~~g~k~ev~~~~~~~~~G~k~~~~~I~G 85 (173)
T 2b3t_B 6 SEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISG 85 (173)
T ss_dssp ------CCCCCCCSCCSGGGSCEEEEEEECSSSHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECTTSSEEEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEEEEEC
T ss_conf 55899999998623443554554899962677678999999999999999987498510022256567771489999976
Q ss_pred CCCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEE
Q ss_conf 56100000101206898730466665035668878850344222111234550369985388865544273100358874
Q gi|254780753|r 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 (355)
Q Consensus 175 ~~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq~vn~t~savri~H 254 (355)
+||||+||+|+|||||||||||+++||+|||||+|+|+|+++| +++ .
T Consensus 86 ~~aY~~Lk~E~GvHRvqRvp~te~~gR~hTStasV~VlP~~~d-~~~--k------------------------------ 132 (173)
T 2b3t_B 86 DGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPD-AEL--R------------------------------ 132 (173)
T ss_dssp SSCHHHHGGGCEEEEEEECCTTCSSCCCEEEEEEEECCBCCCT-TTC--C------------------------------
T ss_pred CCCCCEEEEEECCEEEEEECCCCCCCCCCEEEEEEEECCCCCC-CCC--H------------------------------
T ss_conf 7744234664123389972476434530202456621001332-123--6------------------------------
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEECC
Q ss_conf 69747766555552246799999999999999999999999999874133233222101301585683311114725079
Q gi|254780753|r 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 (355)
Q Consensus 255 ~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~iRtY~~~p~~~v~DhR~~~~~~~ 334 (355)
| +.+..+|++||||||| ||+||||||+|++++|
T Consensus 133 -------------~---------------------------------qvgs~dRsekIRTYNf-~q~rvtDHRi~~~~~~ 165 (173)
T 2b3t_B 133 -------------N---------------------------------LLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYR 165 (173)
T ss_dssp -------------C----------------------------------------CCEEEEEET-TTTEEEEGGGTEEESC
T ss_pred -------------H---------------------------------HCCCCCCCCCEEEEEC-CCCCCCEECCCCEECC
T ss_conf -------------0---------------------------------0410014385476616-9886210045886778
Q ss_pred HHHHHCCC
Q ss_conf 77871897
Q gi|254780753|r 335 PSDVLDGD 342 (355)
Q Consensus 335 ~~~vl~G~ 342 (355)
|+.||+|+
T Consensus 166 l~~~l~Ge 173 (173)
T 2b3t_B 166 LDEVMEGK 173 (173)
T ss_dssp HHHHHHTC
T ss_pred HHHHHCCC
T ss_conf 44764987