HHsearch results for GI: 254780753 and protein with PDBid: 1zbt_A
>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor 1 (RF-1), structural genomics, joint center for structural genomics, JCSG; 2.34A {Streptococcus mutans}
Probab=100.00 E-value=0 Score=926.08 Aligned_cols=349 Identities=28% Similarity=0.442 Sum_probs=322.4
Q ss_pred HHHHHHHH---HCC-HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf 99999886---549-8999999999999870866002589999999999889999999999999986399999863100-
Q gi|254780753|r 5 RQLNCLGG---LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE- 79 (355)
Q Consensus 5 ~rl~~l~~---~fD-le~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee- 79 (355)
.++..+++ ||| ++.+..|+.+|+.+|++|+||+||++|++++||++.|+++|+.|+.+....+++.++.+|++++
T Consensus 4 ~~~~~~~~~M~ifdkLe~i~~r~~eLe~~lsdp~~w~D~~ka~~l~kE~s~L~~~v~~~~~l~~~~~dl~el~eLl~e~~ 83 (371)
T 1zbt_A 4 DKIHHHHHHMNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIADAQEMIKDAS 83 (371)
T ss_dssp -------CCCCHHHHHHHHHHHHHHC--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 11011435212999999999999999998709841229999999999999899999999999999987999999985136
Q ss_pred CCCHHHHHHHHHHHHHHHHH----HHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00002345667655577401----58998876303457662489982177870277899999998999987753113444
Q gi|254780753|r 80 DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 (355)
Q Consensus 80 ~D~el~eE~~~el~~l~~~l----e~LE~~~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi 155 (355)
+|+++.+++.+++..+...+ +++++.+||+||+|.+||||||||||||+||||||+||||||+|||+++||+++++
T Consensus 84 ~D~el~ela~eEl~~~~~~l~~l~~~le~~lL~~d~~D~~nailEIrAGaGG~EA~dwA~~L~RMY~r~Ae~~g~k~eii 163 (371)
T 1zbt_A 84 GDPELEEMAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAENQGWKFEVM 163 (371)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCTTTTSCEEEEEEECTTTHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf 88579999999998755458999999999851589776668699996488853799999999999999999769834761
Q ss_pred HCCCCCCCCEEEEEEEEECCCCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 20545458501346885055610000010120689873046666503566887885034422211123455036998538
Q gi|254780753|r 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 (355)
Q Consensus 156 ~~~~~e~~GiK~~~~~I~G~~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rs 235 (355)
+.++|+.||||+|+|.|+|++|||+||+|+|||||||||||+++||+|||||+|+|+|++++ ++++|+|+||+||||||
T Consensus 164 d~~~g~~gGiKsa~~~I~G~~ayg~Lk~E~GvHRv~Rip~~~s~~r~hts~~~v~v~p~~~~-~~~~i~~~dl~idt~Rs 242 (371)
T 1zbt_A 164 EASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYEIDPKDLRVDIYHA 242 (371)
T ss_dssp EEEECSSSCEEEEEEEEESTTHHHHHGGGCEEEEEEECCTTCSSCCCEEEEEEEEEEECCCG-GGSCCCGGGEEEEEECC
T ss_pred CCCCCCCCCCCEEEEEEEECEEHHCCEEECEEEEEEEECCCCCCCCEEEEEEEEEEECCCCC-CCCCCCCCCEEEEEECC
T ss_conf 43577767712169999502121021340514799997887888870688789998056776-54405777506998338
Q ss_pred CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEE
Q ss_conf 88655442731003588746974776655555224679999999999999999999999999987413-32332221013
Q gi|254780753|r 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRS 314 (355)
Q Consensus 236 sg~ggq~vn~t~savri~H~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~iRt 314 (355)
|||||||||||+|||||||+||||+|.||+|||||+||++||++|++|||+++.+++.++....|..+ +..+||+||||
T Consensus 243 sG~GGQ~VNkt~sAVRitH~pTGi~v~~q~eRSQ~~Nk~~A~~~L~~kl~~~~~~~~~~~~~~~rk~~~~~~~rs~~IRt 322 (371)
T 1zbt_A 243 SGAGGQNVNKVATAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRSERIRT 322 (371)
T ss_dssp ---------CCCCEEEEEETTTTEEEEECSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC----CCSCSCTTSEEEE
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 88877777765515899993488589942651438799999999999999999999999999988730402664357508
Q ss_pred EECCCCCCCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCCC
Q ss_conf 01585683311114725079778718977999999972259
Q gi|254780753|r 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 (355)
Q Consensus 315 Y~~~p~~~v~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~~ 355 (355)
||| ||+||||||||++++|+++||+|+||+||+|||.|++
T Consensus 323 Y~~-p~~~V~DhR~~~~~~~~~~vldG~ld~~i~a~~~~~~ 362 (371)
T 1zbt_A 323 YNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 362 (371)
T ss_dssp EET-TTTEEEETTTTEEESCHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCC-CCCCHHHHCCCCEECCHHHHHCCCHHHHHHHHHHHHH
T ss_conf 107-9775066324886368357619866999999999999