HHsearch results for GI: 254780753 and protein with PDBid: 2ihr_1
>2ihr_1 Peptide chain release factor 2; mixed alpha-beta, translation; 2.50A {Thermus thermophilus} PDB: 2b9m_Y* 3f1e_X 3f1g_X 2x9r_Y* 2x9t_Y* 2jl5_Y 2jl7_Y 2wh1_Y 2wh3_Y
Probab=100.00 E-value=0 Score=954.23 Aligned_cols=348 Identities=44% Similarity=0.698 Sum_probs=334.2
Q ss_pred CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 56899999886549899999999999987086600258999999999988999999999999998639999986310000
Q gi|254780753|r 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 (355)
Q Consensus 2 EL~~rl~~l~~~fDle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee~D 81 (355)
+|.+|+..+++|||++.++.|+.+|+++|++|+||+||++|++++||++.|+++|+.|+.+.+.++++.+|.+++ |
T Consensus 5 ~l~~rl~~lg~~FDle~~~~rl~ELE~~lsdP~fW~D~~kA~kl~KE~s~L~~iV~~~~~l~~~ledl~EL~ee~----d 80 (365)
T 2ihr_1 5 RLAQRLEGLGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLLELMEEL----P 80 (365)
T ss_dssp -CTTTHHHHTTSSSHHHHHHHHTTTTTSTTCGGGTTTGGGSSSTTHHHHHTHHHHHHHHHHHHHTTTHHHHTTCS----C
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H
T ss_conf 999999998865499999999999999871980444999999999999999999999999999999999998630----1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 00234566765557740158998876303457662489982177870277899999998999987753113444205454
Q gi|254780753|r 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 (355)
Q Consensus 82 ~el~eE~~~el~~l~~~le~LE~~~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e 161 (355)
.++.+++..++..+.+.++++++++||++|+|.+||||||||||||+||||||+||||||+|||+++||++++++.++|+
T Consensus 81 ~E~~e~~~~El~~l~~~l~~le~~~ll~~~~D~~nailEIrAGaGG~EA~dwA~~L~RMY~r~Ae~~g~k~eii~~~~~e 160 (365)
T 2ihr_1 81 AEEREALKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGP 160 (365)
T ss_dssp CTTGGGTGGGTHHHHHHHHHHHHHHHTCSSSTTSEEEEEEEECSSTHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf 53688998744345557999999871468331254132886268606899999999999999997679848998740456
Q ss_pred CCCEEEEEEEEECCCCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 58501346885055610000010120689873046666503566887885034422211123455036998538886554
Q gi|254780753|r 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 (355)
Q Consensus 162 ~~GiK~~~~~I~G~~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq 241 (355)
.||||+|++.|+|++|||+||+|+|||||||||||+++||||||||+|+|+|++++.+++.|+|+||+|+||||||||||
T Consensus 161 ~~Gik~~~~~I~G~~ayg~lk~E~GvHRv~Rv~~~~~~~r~hts~~~v~v~P~~~~~~~~~i~~~dl~i~t~rssG~GGQ 240 (365)
T 2ihr_1 161 EAGIDYAQILVKGENAYGLLSPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240 (365)
T ss_dssp SSSEEEEEEEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEEECCSSSSCCCCGGGEEEEEECCCCSSCC
T ss_pred CCCCEEEEEEEECCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCHHHHCCCCCCEEEEEEECCCCCCC
T ss_conf 88860699999656533203321632889863897899972444678999767761132003301115898866889878
Q ss_pred CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 42731003588746974776655555224679999999999999999999999999987413323322210130158568
Q gi|254780753|r 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 (355)
Q Consensus 242 ~vn~t~savri~H~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~iRtY~~~p~~ 321 (355)
|||||+|||||||+||||+|.||++||||+||++||++|++|||+++.++++++.+..+++....+||+||||||| ||+
T Consensus 241 ~vNkt~sAVri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~kl~~~~~~~~~~~~~~~~~~~~~~~r~~~iRtY~f-p~~ 319 (365)
T 2ihr_1 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEVRPIEWGSQIRSYVL-DKN 319 (365)
T ss_dssp SGGGSCSEEEEEETTTTEEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCSCCSCCCSCSEEEEG-GGT
T ss_pred CCCCCCCEEEEEECCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEC-CCC
T ss_conf 8665132479997387225543012147765999999999999999999999999998847477776588115258-988
Q ss_pred CCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCC
Q ss_conf 331111472507977871897799999997225
Q gi|254780753|r 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 (355)
Q Consensus 322 ~v~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~ 354 (355)
||||||||++++|++.||+|+||+||+|||+|+
T Consensus 320 rVtDhR~~~~~~~~~~vl~G~ld~~i~a~l~~~ 352 (365)
T 2ihr_1 320 YVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 352 (365)
T ss_dssp EEEETTTCCEESCHHHHTTTCCHHHHHHHHHHH
T ss_pred CCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHH
T ss_conf 342016498557868876887099999999999