HHsearch results for GI: 254780753 and protein with PDBid: 2ihr_1

>2ihr_1 Peptide chain release factor 2; mixed alpha-beta, translation; 2.50A {Thermus thermophilus} PDB: 2b9m_Y* 3f1e_X 3f1g_X 2x9r_Y* 2x9t_Y* 2jl5_Y 2jl7_Y 2wh1_Y 2wh3_Y
Probab=100.00  E-value=0  Score=954.23  Aligned_cols=348  Identities=44%  Similarity=0.698  Sum_probs=334.2

Q ss_pred             CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             56899999886549899999999999987086600258999999999988999999999999998639999986310000
Q gi|254780753|r    2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD   81 (355)
Q Consensus         2 EL~~rl~~l~~~fDle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee~D   81 (355)
                      +|.+|+..+++|||++.++.|+.+|+++|++|+||+||++|++++||++.|+++|+.|+.+.+.++++.+|.+++    |
T Consensus         5 ~l~~rl~~lg~~FDle~~~~rl~ELE~~lsdP~fW~D~~kA~kl~KE~s~L~~iV~~~~~l~~~ledl~EL~ee~----d   80 (365)
T 2ihr_1            5 RLAQRLEGLGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLLELMEEL----P   80 (365)
T ss_dssp             -CTTTHHHHTTSSSHHHHHHHHTTTTTSTTCGGGTTTGGGSSSTTHHHHHTHHHHHHHHHHHHHTTTHHHHTTCS----C
T ss_pred             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H
T ss_conf             999999998865499999999999999871980444999999999999999999999999999999999998630----1


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             00234566765557740158998876303457662489982177870277899999998999987753113444205454
Q gi|254780753|r   82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE  161 (355)
Q Consensus        82 ~el~eE~~~el~~l~~~le~LE~~~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e  161 (355)
                      .++.+++..++..+.+.++++++++||++|+|.+||||||||||||+||||||+||||||+|||+++||++++++.++|+
T Consensus        81 ~E~~e~~~~El~~l~~~l~~le~~~ll~~~~D~~nailEIrAGaGG~EA~dwA~~L~RMY~r~Ae~~g~k~eii~~~~~e  160 (365)
T 2ihr_1           81 AEEREALKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGP  160 (365)
T ss_dssp             CTTGGGTGGGTHHHHHHHHHHHHHHHTCSSSTTSEEEEEEEECSSTHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf             53688998744345557999999871468331254132886268606899999999999999997679848998740456


Q ss_pred             CCCEEEEEEEEECCCCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf             58501346885055610000010120689873046666503566887885034422211123455036998538886554
Q gi|254780753|r  162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ  241 (355)
Q Consensus       162 ~~GiK~~~~~I~G~~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq  241 (355)
                      .||||+|++.|+|++|||+||+|+|||||||||||+++||||||||+|+|+|++++.+++.|+|+||+|+||||||||||
T Consensus       161 ~~Gik~~~~~I~G~~ayg~lk~E~GvHRv~Rv~~~~~~~r~hts~~~v~v~P~~~~~~~~~i~~~dl~i~t~rssG~GGQ  240 (365)
T 2ihr_1          161 EAGIDYAQILVKGENAYGLLSPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ  240 (365)
T ss_dssp             SSSEEEEEEEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEEECCSSSSCCCCGGGEEEEEECCCCSSCC
T ss_pred             CCCCEEEEEEEECCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCHHHHCCCCCCEEEEEEECCCCCCC
T ss_conf             88860699999656533203321632889863897899972444678999767761132003301115898866889878


Q ss_pred             CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf             42731003588746974776655555224679999999999999999999999999987413323322210130158568
Q gi|254780753|r  242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ  321 (355)
Q Consensus       242 ~vn~t~savri~H~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~iRtY~~~p~~  321 (355)
                      |||||+|||||||+||||+|.||++||||+||++||++|++|||+++.++++++.+..+++....+||+||||||| ||+
T Consensus       241 ~vNkt~sAVri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~kl~~~~~~~~~~~~~~~~~~~~~~~r~~~iRtY~f-p~~  319 (365)
T 2ihr_1          241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEVRPIEWGSQIRSYVL-DKN  319 (365)
T ss_dssp             SGGGSCSEEEEEETTTTEEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCSCCSCCCSCSEEEEG-GGT
T ss_pred             CCCCCCCEEEEEECCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEC-CCC
T ss_conf             8665132479997387225543012147765999999999999999999999999998847477776588115258-988


Q ss_pred             CCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCC
Q ss_conf             331111472507977871897799999997225
Q gi|254780753|r  322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK  354 (355)
Q Consensus       322 ~v~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~  354 (355)
                      ||||||||++++|++.||+|+||+||+|||+|+
T Consensus       320 rVtDhR~~~~~~~~~~vl~G~ld~~i~a~l~~~  352 (365)
T 2ihr_1          320 YVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK  352 (365)
T ss_dssp             EEEETTTCCEESCHHHHTTTCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHH
T ss_conf             342016498557868876887099999999999