Query gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 355
No_of_seqs 271 out of 3128
Neff 6.5
Searched_HMMs 23785
Date Tue May 31 17:31:59 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780753.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gqe_A Release factor 2, RF2; 100.0 0 0 992.6 32.4 352 2-354 13-364 (365)
2 2ihr_1 Peptide chain release f 100.0 0 0 954.2 21.0 348 2-354 5-352 (365)
3 1zbt_A RF-1, peptide chain rel 100.0 0 0 926.1 23.1 349 5-355 4-362 (371)
4 3d5a_X RF1, peptide chain rele 100.0 0 0 913.4 28.8 341 13-355 1-344 (354)
5 2b3t_B RF-1, peptide chain rel 100.0 0 0 914.4 13.2 336 15-354 8-348 (360)
6 1rq0_A RF-1, peptide chain rel 100.0 0 0 866.3 23.6 321 20-354 2-324 (342)
7 2jva_A Peptidyl-tRNA hydrolase 99.7 2.1E-17 8.8E-22 143.6 4.5 68 219-286 6-97 (108)
8 2jy9_A Putative tRNA hydrolase 99.7 3E-17 1.2E-21 142.5 4.5 69 219-287 6-98 (148)
9 1j26_A Immature colon carcinom 99.6 3.9E-16 1.6E-20 134.6 4.5 68 218-285 12-104 (112)
10 3err_A Fusion protein of micro 91.4 0.25 1.1E-05 28.7 4.8 103 12-119 125-229 (536)
11 1m1j_B Fibrinogen beta chain; 87.1 1.7 7.1E-05 22.8 11.2 23 83-105 168-190 (464)
12 2dq0_A Seryl-tRNA synthetase; 87.1 1.7 7.1E-05 22.8 11.0 91 13-103 1-96 (455)
13 1ses_A Seryl-tRNA synthetase; 75.3 4.3 0.00018 19.9 10.2 54 13-66 1-54 (421)
14 1wle_A Seryl-tRNA synthetase; 72.4 5.1 0.00021 19.4 9.7 56 12-67 39-97 (501)
15 3lay_A Zinc resistance-associa 63.0 7.7 0.00032 18.1 6.3 45 59-105 91-135 (175)
16 3ghg_A Fibrinogen alpha chain; 60.4 8.5 0.00036 17.8 7.6 20 3-22 62-82 (562)
17 1ywm_A C protein alpha-antigen 57.4 9.5 0.0004 17.4 6.8 43 13-57 120-162 (200)
18 3ghg_B Fibrinogen beta chain; 56.7 9.7 0.00041 17.3 7.7 19 86-104 166-184 (461)
19 1deq_A Fibrinogen (alpha chain 54.9 10 0.00043 17.1 11.1 10 21-30 67-76 (390)
20 2hdl_A Small inducible cytokin 54.0 5.8 0.00024 18.9 2.2 46 104-149 21-74 (78)
21 2dq3_A Seryl-tRNA synthetase; 50.0 12 0.00051 16.6 11.9 107 13-121 1-127 (425)
22 3ofo_I 30S ribosomal protein S 41.5 12 0.0005 16.7 2.2 29 197-228 4-32 (127)
23 3fpf_A Mtnas, putative unchara 38.2 18 0.00077 15.4 11.3 125 3-135 13-143 (298)
24 2vqe_I 30S ribosomal protein S 38.2 11 0.00046 17.0 1.6 28 198-228 6-33 (128)
25 3jyv_I 40S ribosomal protein S 37.8 10 0.00043 17.2 1.3 29 197-228 3-31 (138)
26 1dcs_A Deacetoxycephalosporin 35.9 20 0.00083 15.1 2.8 36 182-218 237-272 (311)
27 1vq8_D 50S ribosomal protein L 33.2 9.9 0.00042 17.3 0.7 73 159-235 66-138 (177)
28 2zkq_i 40S ribosomal protein S 31.7 12 0.00052 16.6 1.0 29 197-228 11-39 (146)
29 2pc6_A Probable acetolactate s 31.2 18 0.00076 15.4 1.7 64 137-201 18-86 (165)
30 3bbn_I Ribosomal protein S9; s 29.8 18 0.00074 15.5 1.5 29 197-228 73-101 (197)
31 1m0d_A Endonuclease, endodeoxy 28.8 15 0.00064 15.9 1.0 12 141-152 98-109 (138)
32 3lu0_D DNA-directed RNA polyme 27.2 27 0.0011 14.2 3.0 11 117-127 821-831 (1407)
33 1mqv_A Cytochrome C'; four-hel 25.2 29 0.0012 13.9 3.7 45 5-49 17-85 (125)
34 2jya_A AGR_C_3324P, uncharacte 24.8 14 0.00058 16.3 0.2 15 142-156 65-79 (106)
35 2f1f_A Acetolactate synthase i 24.3 31 0.0013 13.8 2.2 73 137-211 17-94 (164)
36 3lbx_B Beta-I spectrin, spectr 23.7 31 0.0013 13.7 7.9 56 14-69 11-66 (185)
37 1dp7_P MHC class II transcript 23.0 32 0.0014 13.6 2.1 20 132-151 17-36 (76)
38 3fb2_A Spectrin alpha chain, b 22.6 33 0.0014 13.6 9.7 52 15-66 21-72 (218)
39 2xl6_A Cytochrome C'; electron 22.6 33 0.0014 13.6 1.9 45 5-49 21-86 (127)
40 3ktd_A Prephenate dehydrogenas 21.6 34 0.0014 13.4 6.5 24 308-333 295-318 (341)
41 1gqa_A Cytochrome C'; electron 21.5 34 0.0014 13.4 3.1 47 4-50 18-91 (130)
42 3hdq_A UDP-galactopyranose mut 20.9 20 0.00084 15.1 0.4 17 147-164 50-66 (397)
43 2j8w_A Cytochrome C'; heme, ir 20.7 36 0.0015 13.3 3.1 47 4-50 20-90 (129)
44 1kl7_A Threonine synthase; thr 20.3 23 0.00098 14.6 0.6 46 117-163 111-165 (514)
No 1
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=100.00 E-value=0 Score=992.60 Aligned_cols=352 Identities=52% Similarity=0.847 Sum_probs=344.0
Q ss_pred CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 56899999886549899999999999987086600258999999999988999999999999998639999986310000
Q gi|254780753|r 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 (355)
Q Consensus 2 EL~~rl~~l~~~fDle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee~D 81 (355)
+|.++++.|+++||++.++.|+.+|+.+|++|+||+||++|++++||++.|+++|+.|+.+.+.++|+.++.+|+.+++|
T Consensus 13 ~l~~~~~~l~~~ld~d~~~~rl~eLe~~l~~p~~w~D~~~a~kl~ke~~~L~~~v~~~~~l~~~~~dl~el~el~~ee~d 92 (365)
T 1gqe_A 13 DLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADD 92 (365)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999987679899999999999986497255499999999999999999999999999999989999988760132
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 00234566765557740158998876303457662489982177870277899999998999987753113444205454
Q gi|254780753|r 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 (355)
Q Consensus 82 ~el~eE~~~el~~l~~~le~LE~~~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e 161 (355)
.++.+++..++..+...+++|++.+||+||+|.+||||||||||||+||||||+||||||+|||+++||++++++.++|+
T Consensus 93 ~e~~~e~~~el~~l~~~l~~le~~ll~~d~~D~~nailEIrAGaGG~EA~dfA~~L~RMY~ryAE~kgwk~evid~~~~e 172 (365)
T 1gqe_A 93 EETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGE 172 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGGGCCSTTTTSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 78899999999999999999875136899665557459998479968999999999999999999859925898616777
Q ss_pred CCCEEEEEEEEECCCCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 58501346885055610000010120689873046666503566887885034422211123455036998538886554
Q gi|254780753|r 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 (355)
Q Consensus 162 ~~GiK~~~~~I~G~~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq 241 (355)
.||||+|+|.|+|+||||+||+|+|||||||||||||+||||||||+|+|+|+++++++++|+|+||+||||||||||||
T Consensus 173 ~gGik~v~~~I~G~~aYg~Lk~EsGVHRvqRvp~tes~gR~HTS~asV~V~P~~~~~~~i~i~~~Dl~id~~rssG~GGQ 252 (365)
T 1gqe_A 173 VAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 252 (365)
T ss_dssp SSSEEEEEEEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEECCBTTBCCCCCGGGEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEEECCCHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCEECCHHHEEEEEEECCCCCCC
T ss_conf 67327999999746725666314873036756886888847986678998257887640431657827986556888767
Q ss_pred CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 42731003588746974776655555224679999999999999999999999999987413323322210130158568
Q gi|254780753|r 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 (355)
Q Consensus 242 ~vn~t~savri~H~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~iRtY~~~p~~ 321 (355)
|||||+|||||||+||||+|+||++||||+||++||++|++|||+++.++++++.+..++++.+++||+||||||| ||+
T Consensus 253 ~vNkt~saVri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~IRtYnf-~~~ 331 (365)
T 1gqe_A 253 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIGWGSQIRSYVL-DDS 331 (365)
T ss_dssp STTSSCCEEEEEETTTCCEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCCCCSCSEEEEEEG-GGT
T ss_pred CCCCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCC
T ss_conf 6565343489997078649996060204778999999999999999999999999998843113557698567548-998
Q ss_pred CCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCC
Q ss_conf 331111472507977871897799999997225
Q gi|254780753|r 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 (355)
Q Consensus 322 ~v~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~ 354 (355)
||||||||++++|+++||+|+||+||+|||++.
T Consensus 332 rVtDhR~~~~~~~~~~vl~G~ld~~i~a~l~~~ 364 (365)
T 1gqe_A 332 RIKDLRTGVETRNTQAVLDGSLDQFIEASLKAG 364 (365)
T ss_dssp EEEETTTCCEESCHHHHHTTCCHHHHHHHHHTT
T ss_pred CCEECCCCCEECCHHHHHCCCHHHHHHHHHHCC
T ss_conf 140306597457867876987599999999777
No 2
>2ihr_1 Peptide chain release factor 2; mixed alpha-beta, translation; 2.50A {Thermus thermophilus} PDB: 2b9m_Y* 3f1e_X 3f1g_X 2x9r_Y* 2x9t_Y* 2jl5_Y 2jl7_Y 2wh1_Y 2wh3_Y
Probab=100.00 E-value=0 Score=954.23 Aligned_cols=348 Identities=44% Similarity=0.698 Sum_probs=334.2
Q ss_pred CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 56899999886549899999999999987086600258999999999988999999999999998639999986310000
Q gi|254780753|r 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 (355)
Q Consensus 2 EL~~rl~~l~~~fDle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee~D 81 (355)
+|.+|+..+++|||++.++.|+.+|+++|++|+||+||++|++++||++.|+++|+.|+.+.+.++++.+|.+++ |
T Consensus 5 ~l~~rl~~lg~~FDle~~~~rl~ELE~~lsdP~fW~D~~kA~kl~KE~s~L~~iV~~~~~l~~~ledl~EL~ee~----d 80 (365)
T 2ihr_1 5 RLAQRLEGLGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLLELMEEL----P 80 (365)
T ss_dssp -CTTTHHHHTTSSSHHHHHHHHTTTTTSTTCGGGTTTGGGSSSTTHHHHHTHHHHHHHHHHHHHTTTHHHHTTCS----C
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H
T ss_conf 999999998865499999999999999871980444999999999999999999999999999999999998630----1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 00234566765557740158998876303457662489982177870277899999998999987753113444205454
Q gi|254780753|r 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 (355)
Q Consensus 82 ~el~eE~~~el~~l~~~le~LE~~~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e 161 (355)
.++.+++..++..+.+.++++++++||++|+|.+||||||||||||+||||||+||||||+|||+++||++++++.++|+
T Consensus 81 ~E~~e~~~~El~~l~~~l~~le~~~ll~~~~D~~nailEIrAGaGG~EA~dwA~~L~RMY~r~Ae~~g~k~eii~~~~~e 160 (365)
T 2ihr_1 81 AEEREALKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGP 160 (365)
T ss_dssp CTTGGGTGGGTHHHHHHHHHHHHHHHTCSSSTTSEEEEEEEECSSTHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf 53688998744345557999999871468331254132886268606899999999999999997679848998740456
Q ss_pred CCCEEEEEEEEECCCCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 58501346885055610000010120689873046666503566887885034422211123455036998538886554
Q gi|254780753|r 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 (355)
Q Consensus 162 ~~GiK~~~~~I~G~~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq 241 (355)
.||||+|++.|+|++|||+||+|+|||||||||||+++||||||||+|+|+|++++.+++.|+|+||+|+||||||||||
T Consensus 161 ~~Gik~~~~~I~G~~ayg~lk~E~GvHRv~Rv~~~~~~~r~hts~~~v~v~P~~~~~~~~~i~~~dl~i~t~rssG~GGQ 240 (365)
T 2ihr_1 161 EAGIDYAQILVKGENAYGLLSPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240 (365)
T ss_dssp SSSEEEEEEEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEEECCSSSSCCCCGGGEEEEEECCCCSSCC
T ss_pred CCCCEEEEEEEECCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCHHHHCCCCCCEEEEEEECCCCCCC
T ss_conf 88860699999656533203321632889863897899972444678999767761132003301115898866889878
Q ss_pred CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 42731003588746974776655555224679999999999999999999999999987413323322210130158568
Q gi|254780753|r 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 (355)
Q Consensus 242 ~vn~t~savri~H~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~iRtY~~~p~~ 321 (355)
|||||+|||||||+||||+|.||++||||+||++||++|++|||+++.++++++.+..+++....+||+||||||| ||+
T Consensus 241 ~vNkt~sAVri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~kl~~~~~~~~~~~~~~~~~~~~~~~r~~~iRtY~f-p~~ 319 (365)
T 2ihr_1 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEVRPIEWGSQIRSYVL-DKN 319 (365)
T ss_dssp SGGGSCSEEEEEETTTTEEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCSCCSCCCSCSEEEEG-GGT
T ss_pred CCCCCCCEEEEEECCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEC-CCC
T ss_conf 8665132479997387225543012147765999999999999999999999999998847477776588115258-988
Q ss_pred CCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCC
Q ss_conf 331111472507977871897799999997225
Q gi|254780753|r 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 (355)
Q Consensus 322 ~v~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~ 354 (355)
||||||||++++|++.||+|+||+||+|||+|+
T Consensus 320 rVtDhR~~~~~~~~~~vl~G~ld~~i~a~l~~~ 352 (365)
T 2ihr_1 320 YVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 352 (365)
T ss_dssp EEEETTTCCEESCHHHHTTTCCHHHHHHHHHHH
T ss_pred CCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHH
T ss_conf 342016498557868876887099999999999
No 3
>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor 1 (RF-1), structural genomics, joint center for structural genomics, JCSG; 2.34A {Streptococcus mutans}
Probab=100.00 E-value=0 Score=926.08 Aligned_cols=349 Identities=28% Similarity=0.442 Sum_probs=322.4
Q ss_pred HHHHHHHH---HCC-HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf 99999886---549-8999999999999870866002589999999999889999999999999986399999863100-
Q gi|254780753|r 5 RQLNCLGG---LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE- 79 (355)
Q Consensus 5 ~rl~~l~~---~fD-le~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee- 79 (355)
.++..+++ ||| ++.+..|+.+|+.+|++|+||+||++|++++||++.|+++|+.|+.+....+++.++.+|++++
T Consensus 4 ~~~~~~~~~M~ifdkLe~i~~r~~eLe~~lsdp~~w~D~~ka~~l~kE~s~L~~~v~~~~~l~~~~~dl~el~eLl~e~~ 83 (371)
T 1zbt_A 4 DKIHHHHHHMNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIADAQEMIKDAS 83 (371)
T ss_dssp -------CCCCHHHHHHHHHHHHHHC--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 11011435212999999999999999998709841229999999999999899999999999999987999999985136
Q ss_pred CCCHHHHHHHHHHHHHHHHH----HHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00002345667655577401----58998876303457662489982177870277899999998999987753113444
Q gi|254780753|r 80 DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 (355)
Q Consensus 80 ~D~el~eE~~~el~~l~~~l----e~LE~~~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi 155 (355)
+|+++.+++.+++..+...+ +++++.+||+||+|.+||||||||||||+||||||+||||||+|||+++||+++++
T Consensus 84 ~D~el~ela~eEl~~~~~~l~~l~~~le~~lL~~d~~D~~nailEIrAGaGG~EA~dwA~~L~RMY~r~Ae~~g~k~eii 163 (371)
T 1zbt_A 84 GDPELEEMAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAENQGWKFEVM 163 (371)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCTTTTSCEEEEEEECTTTHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf 88579999999998755458999999999851589776668699996488853799999999999999999769834761
Q ss_pred HCCCCCCCCEEEEEEEEECCCCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 20545458501346885055610000010120689873046666503566887885034422211123455036998538
Q gi|254780753|r 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 (355)
Q Consensus 156 ~~~~~e~~GiK~~~~~I~G~~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rs 235 (355)
+.++|+.||||+|+|.|+|++|||+||+|+|||||||||||+++||+|||||+|+|+|++++ ++++|+|+||+||||||
T Consensus 164 d~~~g~~gGiKsa~~~I~G~~ayg~Lk~E~GvHRv~Rip~~~s~~r~hts~~~v~v~p~~~~-~~~~i~~~dl~idt~Rs 242 (371)
T 1zbt_A 164 EASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYEIDPKDLRVDIYHA 242 (371)
T ss_dssp EEEECSSSCEEEEEEEEESTTHHHHHGGGCEEEEEEECCTTCSSCCCEEEEEEEEEEECCCG-GGSCCCGGGEEEEEECC
T ss_pred CCCCCCCCCCCEEEEEEEECEEHHCCEEECEEEEEEEECCCCCCCCEEEEEEEEEEECCCCC-CCCCCCCCCEEEEEECC
T ss_conf 43577767712169999502121021340514799997887888870688789998056776-54405777506998338
Q ss_pred CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEE
Q ss_conf 88655442731003588746974776655555224679999999999999999999999999987413-32332221013
Q gi|254780753|r 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRS 314 (355)
Q Consensus 236 sg~ggq~vn~t~savri~H~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~iRt 314 (355)
|||||||||||+|||||||+||||+|.||+|||||+||++||++|++|||+++.+++.++....|..+ +..+||+||||
T Consensus 243 sG~GGQ~VNkt~sAVRitH~pTGi~v~~q~eRSQ~~Nk~~A~~~L~~kl~~~~~~~~~~~~~~~rk~~~~~~~rs~~IRt 322 (371)
T 1zbt_A 243 SGAGGQNVNKVATAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRSERIRT 322 (371)
T ss_dssp ---------CCCCEEEEEETTTTEEEEECSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC----CCSCSCTTSEEEE
T ss_pred CCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 88877777765515899993488589942651438799999999999999999999999999988730402664357508
Q ss_pred EECCCCCCCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCCC
Q ss_conf 01585683311114725079778718977999999972259
Q gi|254780753|r 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 (355)
Q Consensus 315 Y~~~p~~~v~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~~ 355 (355)
||| ||+||||||||++++|+++||+|+||+||+|||.|++
T Consensus 323 Y~~-p~~~V~DhR~~~~~~~~~~vldG~ld~~i~a~~~~~~ 362 (371)
T 1zbt_A 323 YNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 362 (371)
T ss_dssp EET-TTTEEEETTTTEEESCHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCC-CCCCHHHHCCCCEECCHHHHHCCCHHHHHHHHHHHHH
T ss_conf 107-9775066324886368357619866999999999999
No 4
>3d5a_X RF1, peptide chain release factor 1; ribosome, coiled coil, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding; 3.21A {Thermus thermophilus HB27} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=100.00 E-value=0 Score=913.42 Aligned_cols=341 Identities=31% Similarity=0.456 Sum_probs=315.1
Q ss_pred HCC-HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 549-8999999999999870866002589999999999889999999999999986399999863100000023456676
Q gi|254780753|r 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 (355)
Q Consensus 13 ~fD-le~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee~D~el~eE~~~e 91 (355)
||| ++.++.|+.+|+++|++|+||+||++|++++||++.|+++|+.|+.+.+.++|+.++.+|+.++++.++.++...+
T Consensus 1 M~dKLe~i~~r~~eLe~~l~dp~~w~D~~ka~~l~ke~~~L~~~v~~~~~l~~~~~dl~el~el~~D~e~~ela~ee~~~ 80 (354)
T 3d5a_X 1 MLDKLDRLEEEYRELEALLSDPEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDLEQAESLLDDPELKEMAKAEREA 80 (354)
T ss_dssp CHHHHHHHTHHHHHHHHHTTSTTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 91579999999999999861983223999999999999999999999999999999899999885281107899999999
Q ss_pred H-HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 5-557740158998876303457662489982177870277899999998999987753113444205454585013468
Q gi|254780753|r 92 L-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 (355)
Q Consensus 92 l-~~l~~~le~LE~~~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e~~GiK~~~~ 170 (355)
+ ..+....+++++.+||+||+|.+||||||||||||+||||||+||||||+|||+++||++++++.++|+.||||+|+|
T Consensus 81 l~~~l~~l~~ele~~lL~~~~~D~~nailEIrAGaGG~EA~dwA~~L~RMY~r~ae~~g~k~evi~~~~~~~~Gik~~~~ 160 (354)
T 3d5a_X 81 LLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLFNMYLRFAEEMGFETEVLDSHPTDLGGFSKVVF 160 (354)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCCCCCCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEECTTSSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEE
T ss_conf 98778889999999717798655547179985167872499999999999999997475047861246655677505999
Q ss_pred EEECCCCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 85055610000010120689873046666503566887885034422211123455036998538886554427310035
Q gi|254780753|r 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 (355)
Q Consensus 171 ~I~G~~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq~vn~t~sav 250 (355)
.|+|+||||+||+|+|||||||||||+++||+|||||+|+|+|+.++ +++.|+++||+|||||||||||||||||+|||
T Consensus 161 ~i~G~~ayg~Lk~E~GvHRv~Rip~~e~~~r~hTs~a~V~v~p~~~~-~~~~i~~~dl~i~t~RssG~GGQ~VNkt~sAV 239 (354)
T 3d5a_X 161 EVRGPGAYGTFKYESGVHRVQRVPVTETQGRIHTSTATVAVLPKAEE-EDFALNMDEIRIDVMRASGPGGQGVNTTDSAV 239 (354)
T ss_dssp EEESTTHHHHHGGGCSEEEEEECCSSCSSCCCEEEEEEEEEEECCCC-CCCCCCGGGEEEEEECCCSCCHHHHHHCCCEE
T ss_pred EEECCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEEEEEECCCCC-CCCCCCCHHHEEEEEECCCCCCCCCCCCCCEE
T ss_conf 99826630011440574268856988778855778889999455555-54566710322564345788766656545447
Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 88746974776655555224679999999999999999999999999987413-32332221013015856833111147
Q gi|254780753|r 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTN 329 (355)
Q Consensus 251 ri~H~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~iRtY~~~p~~~v~DhR~~ 329 (355)
||||+||||+|+||+|||||+||++||++|++|||+++.+++.++....+..+ +..+||+||||||| ||+||||||||
T Consensus 240 RitH~ptGi~v~~q~eRSQ~~Nk~~A~~~L~~kL~~~~~~~~~~~~~~~r~~~~~~~~r~~~iRtY~~-p~~rV~DhR~~ 318 (354)
T 3d5a_X 240 RVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLLEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDHRIG 318 (354)
T ss_dssp EEEETTTTEEEEECCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGGSCSSEEEET-TTTEEEETTTT
T ss_pred EEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCHHHCCC
T ss_conf 99970676688713302289999999999999999999999999999888733724466788467006-98751330448
Q ss_pred CEECCHHHHHCCCHHHHHHHHHHCCC
Q ss_conf 25079778718977999999972259
Q gi|254780753|r 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 (355)
Q Consensus 330 ~~~~~~~~vl~G~ld~~i~a~l~~~~ 355 (355)
++++|++.||+|+||+||+||++|++
T Consensus 319 ~~~~~~~~vl~G~ld~~i~~~~~~~~ 344 (354)
T 3d5a_X 319 FTTHDLEGVLSGHLTPILEALKRADQ 344 (354)
T ss_dssp EEECCHHHHTTTCCHHHHHHHHHHHH
T ss_pred CEECCHHHHHCCCHHHHHHHHHHHHH
T ss_conf 86368057758873999999999999
No 5
>2b3t_B RF-1, peptide chain release factor 1; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: e.38.1.1
Probab=100.00 E-value=0 Score=914.44 Aligned_cols=336 Identities=34% Similarity=0.481 Sum_probs=311.2
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 98999999999999870866002589999999999889999999999999986399999863100000023456676555
Q gi|254780753|r 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 (355)
Q Consensus 15 Dle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee~D~el~eE~~~el~~ 94 (355)
.++.+..|+.+|+++|++|+||+||++|++++||++.|+++++.|+.|....+++.++.+|+.++++.++. .+++..
T Consensus 8 kLe~i~~r~~eLe~~lsdp~~w~D~~~a~~l~kE~~~L~~~v~~~~~~~~~~~~l~el~el~~d~e~~ela---~ee~~~ 84 (360)
T 2b3t_B 8 KLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMA---QDELRE 84 (360)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTSSCCSSHHHHHHHHHHHHHHHHHHHHHTTCC----------------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH---HHHHHH
T ss_conf 99999999999999871986200999999999999999999999999999999899999874484018999---999999
Q ss_pred HHHHH----HHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 77401----58998876303457662489982177870277899999998999987753113444205454585013468
Q gi|254780753|r 95 IKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 (355)
Q Consensus 95 l~~~l----e~LE~~~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e~~GiK~~~~ 170 (355)
+...+ +++++.+||++|+|.+||||||||||||+||||||+||||||+|||+++||++++++.++|+.||||+|+|
T Consensus 85 ~~~~l~~l~~~l~~~Ll~~~~~D~~nailEIraGaGG~EA~~fA~~L~rMY~r~ae~~gwk~eii~~~~~e~~G~k~~~~ 164 (360)
T 2b3t_B 85 AKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIA 164 (360)
T ss_dssp ----------CCCCCCCSCCSGGGSCEEEEEEECSSSHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECTTSSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEE
T ss_conf 99999999999999707999564558499992588846799999999999999997658852784421567786258999
Q ss_pred EEECCCCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 85055610000010120689873046666503566887885034422211123455036998538886554427310035
Q gi|254780753|r 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 (355)
Q Consensus 171 ~I~G~~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq~vn~t~sav 250 (355)
.|+|+||||+||+|+|||||||||||+++||+|||||+|+|+|++++.++++|+|+||+|||||||||||||||||+|||
T Consensus 165 ~I~G~~ayg~Lk~EsGVHRvqRvp~~~~~~r~hTs~~~v~v~p~~~~~~~~~i~~~dl~i~t~RssG~GGQ~VNkt~sAV 244 (360)
T 2b3t_B 165 KISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTTDSAI 244 (360)
T ss_dssp EECSSSCHHHHGGGCEEEEEEECCTTCSSCCCEEEEEEEECCBCCCTTTCCCCCSSSEEEEECCSSCCCTTTCCCSSEEE
T ss_pred EEECCCHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCE
T ss_conf 99757612455434786269974788888826777779999557775300142711156998777999987766131212
Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 88746974776655555224679999999999999999999999999987413-32332221013015856833111147
Q gi|254780753|r 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTN 329 (355)
Q Consensus 251 ri~H~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~iRtY~~~p~~~v~DhR~~ 329 (355)
||||+||||+|+||++||||+||++||++|++|||+++.+++.++....|..+ +..+||+||||||| ||+||||||||
T Consensus 245 RitH~PTGi~v~~q~eRSQ~~Nk~~A~~~L~~kl~~~~~~~~~~~~~~~rk~~vg~~~rse~IRtYn~-p~~~V~DhR~~ 323 (360)
T 2b3t_B 245 RITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRIN 323 (360)
T ss_dssp EEEETTTCCEEEEEESSCHHHHHHHHHHHHHHHHTTTTTTSCC------CCC-------CCEEEEEET-TTTEEEEGGGT
T ss_pred EEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC-CCCCCHHHCCC
T ss_conf 78965887699972702479999999999999999999999999999987600400123375274517-97764431458
Q ss_pred CEECCHHHHHCCCHHHHHHHHHHCC
Q ss_conf 2507977871897799999997225
Q gi|254780753|r 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 (355)
Q Consensus 330 ~~~~~~~~vl~G~ld~~i~a~l~~~ 354 (355)
++++|++.||+|+||+||+|||.|.
T Consensus 324 ~~~~~~~~vl~G~ld~~i~a~~~~~ 348 (360)
T 2b3t_B 324 LTLYRLDEVMEGKLDMLIEPIIQEH 348 (360)
T ss_dssp EEESCHHHHHHTCTHHHHHHHHHHH
T ss_pred CEECCHHHHHCCCHHHHHHHHHHHH
T ss_conf 8777835764987299999999999
No 6
>1rq0_A RF-1, peptide chain release factor 1; X-RAY, crystal, peptide release factor 1, ribosome, structural genomics, BSGC structure funded by NIH; 2.65A {Thermotoga maritima} SCOP: e.38.1.1 PDB: 2fvo_A
Probab=100.00 E-value=0 Score=866.29 Aligned_cols=321 Identities=35% Similarity=0.558 Sum_probs=290.3
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999987086600258999999999988999999999999998639999986310000002345667655577401
Q gi|254780753|r 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99 (355)
Q Consensus 20 ~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee~D~el~eE~~~el~~l~~~l 99 (355)
++|+++|+++|++|+||+| ++++++++++.|+++++.++. ++|+.++++|+.++.|.++ ++..+...+
T Consensus 2 ~er~~ELe~~ls~P~~~~d--~~~~l~ke~~~L~~i~~l~~~----l~d~~el~el~~ee~d~e~------el~~l~~~l 69 (342)
T 1rq0_A 2 KEKKKEIEKLLARPDLTPE--QMKNYGMEYAKIEEIENITNR----IKETQEFIELLREEGENEL------EIEKYEKEL 69 (342)
T ss_dssp TTTTTHHHHHHHSSCCCHH--HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHTTTTTTTTCCS------CHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCHH--HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHCCCCCHH------HHHHHHHHH
T ss_conf 6899999999718998999--999999999999999999999----9989999999745898589------999999999
Q ss_pred HHHHHH-HHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCC
Q ss_conf 589988-7630345766248998217787027789999999899998775311344420545458501346885055610
Q gi|254780753|r 100 EYKQFE-SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 (355)
Q Consensus 100 e~LE~~-~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e~~GiK~~~~~I~G~~ay 178 (355)
+.++.+ .+|.+|+|++||||||||||||+||||||+||||||+|||+++||++++++.++++.||||+|++.|+|+|||
T Consensus 70 ~~l~~el~~ll~p~D~~nailEIrAGaGG~EA~~fA~~L~RMY~r~Ae~kgwk~eil~~~~~~~gGik~~~~~I~G~~ay 149 (342)
T 1rq0_A 70 DQLYQELLFLLSPEASDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHETDLGGIREVVFFVKGKNAY 149 (342)
T ss_dssp HHHHHHHHHHHSCSSCSEEEEEEEECSSTHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEECTTSCEEEEEEEEESTTHH
T ss_pred HHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCHHH
T ss_conf 99999987407877778869999679985379999999999999997651335422333544456764136998341266
Q ss_pred HHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCH
Q ss_conf 00001012068987304666650356688788503442221112345503699853888655442731003588746974
Q gi|254780753|r 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 (355)
Q Consensus 179 g~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq~vn~t~savri~H~ptg 258 (355)
|+||+|+|||||||||||+++||||||||+|+|+|+.++ ++|+|+|+||+|||||||||||||||||+|||||||+|||
T Consensus 150 g~Lk~E~GvHRvqRvp~~es~gr~hTS~a~V~v~p~~~~-~~i~i~~~dl~i~t~RssG~GGQ~VNkt~saVRitH~PTG 228 (342)
T 1rq0_A 150 GILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEE-KDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTG 228 (342)
T ss_dssp HHHGGGCEEEEEEECCTTSCSCCCEEEEEEEEEEECCCG-GGSCCCGGGEEEEEECCCC----CCSSSSEEEEEEETTTC
T ss_pred HHCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCC-CCEEECHHHEEEEEECCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 531010655899971798888875767779999466776-6536552240254103787432446666606999974886
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEECCCCCCCCCCCCCCEECCHHH
Q ss_conf 776655555224679999999999999999999999999987413-3233222101301585683311114725079778
Q gi|254780753|r 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 (355)
Q Consensus 259 i~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~iRtY~~~p~~~v~DhR~~~~~~~~~~ 337 (355)
|+|+||++||||+||++||++|++|||+++.+++.++....+..+ +..+||+||||||| ||+||||||||++++|+++
T Consensus 229 i~v~~q~eRSQ~~Nk~~A~~~L~~kl~~~~~~~~~~~~~~~r~~~ig~~~rs~~iRtY~f-p~~rV~DhR~~~~~~~l~~ 307 (342)
T 1rq0_A 229 IVVSCQNERSQYQNKQTALRILRARLYQLQKEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQE 307 (342)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC----------CCCEEEEEET-TTTEEEETTTTEEESCHHH
T ss_pred CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCCHHHCCCCEECCHHH
T ss_conf 388734602389999999999999999999999999999987636002356788626318-9887433125981078678
Q ss_pred HHCCCHHHHHHHHHHCC
Q ss_conf 71897799999997225
Q gi|254780753|r 338 VLDGDLDDFMKATLAIK 354 (355)
Q Consensus 338 vl~G~ld~~i~a~l~~~ 354 (355)
||+|+||+||++|+.|.
T Consensus 308 vl~G~ld~~i~~~~~~~ 324 (342)
T 1rq0_A 308 ILDGDLDEIISKLIEHD 324 (342)
T ss_dssp HHTTCCHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHH
T ss_conf 75987399999999999
No 7
>2jva_A Peptidyl-tRNA hydrolase domain protein; GFT hydrolase, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae PV}
Probab=99.67 E-value=2.1e-17 Score=143.61 Aligned_cols=68 Identities=29% Similarity=0.458 Sum_probs=63.6
Q ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCH------------------------HHHHHHHHHHHHHHHH
Q ss_conf 1112345503699853888655442731003588746974------------------------7766555552246799
Q gi|254780753|r 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG------------------------VVVQCQQERSQHKNKA 274 (355)
Q Consensus 219 ~~i~i~~~dl~i~~~rssg~ggq~vn~t~savri~H~ptg------------------------i~v~~q~~rsq~~Nk~ 274 (355)
..|.|+++||.+.+.|||||||||||||+|+|.|++-|++ |+|.||+.|||.+||+
T Consensus 6 ~~i~Ip~~el~~~f~RSSGPGGQ~VNK~~TkV~L~~~~~~~~~~~~~~~~l~~~~~~~i~~~g~l~I~s~~~RSQ~~Nr~ 85 (108)
T 2jva_A 6 NNVHLPDAEIELTAIRAQGAGGQNVNKVSSAMHLRFDINASSLPPFYKERLLALNDSRITSDGVIVLKAQQYRTQEQNRA 85 (108)
T ss_dssp SSCEECGGGEEEEECCCTTCSSSSSCCCCCCEEEEEETTTSCCCHHHHHHHHTCSCTTBCTTCEEEEEECCSSSHHHHHH
T ss_pred CCCEECHHHEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH
T ss_conf 87509879938999987899876512325225789767655555689999999741730579709999887479999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780753|r 275 QAWNMLRAKLYE 286 (355)
Q Consensus 275 ~a~~~l~~~l~~ 286 (355)
.|+++|.+.|.+
T Consensus 86 ~a~~kL~~li~~ 97 (108)
T 2jva_A 86 DALLRLSELIVN 97 (108)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 8
>2jy9_A Putative tRNA hydrolase domain; GFT protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=99.67 E-value=3e-17 Score=142.51 Aligned_cols=69 Identities=38% Similarity=0.556 Sum_probs=61.4
Q ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEE------ECCCH------------------HHHHHHHHHHHHHHHH
Q ss_conf 11123455036998538886554427310035887------46974------------------7766555552246799
Q gi|254780753|r 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT------HIPTG------------------VVVQCQQERSQHKNKA 274 (355)
Q Consensus 219 ~~i~i~~~dl~i~~~rssg~ggq~vn~t~savri~------H~ptg------------------i~v~~q~~rsq~~Nk~ 274 (355)
-.|.|+++||.+.+.|||||||||||||+|+|.|. ++|.+ |+|.||+.|||++|++
T Consensus 6 ~~i~Ip~~ei~~~f~RSsGPGGQnVNK~~TkV~Lr~~l~~~~l~~~~~~rl~~~~~~ri~~~g~lvI~sq~~RSQ~~Nr~ 85 (148)
T 2jy9_A 6 RTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDDGVIIIKAQEFRSQELNRE 85 (148)
T ss_dssp SSCCBCSTTCEEEEECCSCCCSSCSCSCSCEEEEEECSTTSCCCHHHHHHHHHSCCTTBCSSSCEEEEECSSSCHHHHHH
T ss_pred CCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHH
T ss_conf 87717879907888876899876311553331247314556799899999999736665689508999778589999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780753|r 275 QAWNMLRAKLYEL 287 (355)
Q Consensus 275 ~a~~~l~~~l~~~ 287 (355)
.|+..|.+.|.+.
T Consensus 86 ~Al~kL~~~I~~a 98 (148)
T 2jy9_A 86 AAIARLVAVIKEL 98 (148)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999986
No 9
>1j26_A Immature colon carcinoma transcript 1; peptide chain release factors, RF-1, the GGQ motif, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.4.1
Probab=99.60 E-value=3.9e-16 Score=134.56 Aligned_cols=68 Identities=25% Similarity=0.334 Sum_probs=61.7
Q ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCC-------------------------HHHHHHHHHHHHHHH
Q ss_conf 2111234550369985388865544273100358874697-------------------------477665555522467
Q gi|254780753|r 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT-------------------------GVVVQCQQERSQHKN 272 (355)
Q Consensus 218 ~~~i~i~~~dl~i~~~rssg~ggq~vn~t~savri~H~pt-------------------------gi~v~~q~~rsq~~N 272 (355)
.....|+++++.+.+.|||||||||||||+|+|.|++.+. +|+|.||..|||++|
T Consensus 12 ~~~~~Ip~~~i~~~f~RSsGPGGQ~VNK~~TkV~L~~~l~~~~~l~~~~~~~l~~~~~~~i~~~g~l~I~s~~~RsQ~~N 91 (112)
T 1j26_A 12 QASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAGELVLTSESSRYQFRN 91 (112)
T ss_dssp SSCCCCCTTTSEEEEECCCCSSSSCCSSCCCEEEEEEEGGGCTTSCHHHHHHHHHHTTTTBCSSSEEEEEECCCSSHHHH
T ss_pred HHCCCCCHHHEEEEEEECCCCCCCCCCCCCCCEEEEECHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH
T ss_conf 40470487893799887679999844430303058976232357999999999998637366698399998876799999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780753|r 273 KAQAWNMLRAKLY 285 (355)
Q Consensus 273 k~~a~~~l~~~l~ 285 (355)
|+.|+.+|...|.
T Consensus 92 r~~a~~kL~~li~ 104 (112)
T 1j26_A 92 LAECLQKIRDMIA 104 (112)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 10
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus}
Probab=91.43 E-value=0.25 Score=28.68 Aligned_cols=103 Identities=10% Similarity=-0.010 Sum_probs=62.4
Q ss_pred HHCCHHHHHHH-HHHHHH-HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 65498999999-999999-8708660025899999999998899999999999999863999998631000000234566
Q gi|254780753|r 12 GLFDWDNAVQR-LSFLNT-KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 (355)
Q Consensus 12 ~~fDle~~~~r-l~eLE~-~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee~D~el~eE~~ 89 (355)
.-||.+++... +..+.. -+++|+| +++.+.+.|+-...|-.||.....+...++..+.+.+-+++ -++-+.++.
T Consensus 125 ~~fdkd~I~~~~i~ki~k~yi~~~~F--~~e~i~k~S~Aa~~L~~WV~A~~~y~~v~k~v~plk~eL~e--lE~el~e~e 200 (536)
T 3err_A 125 VNFSAEEISDAIREKMKKNYMSNPSY--NYEIVNRASLAAGPMVKWAIAQLNYADMLKRVEPLRNELQK--LEDDAKDNQ 200 (536)
T ss_dssp HHCCGGGCCHHHHHHHHHHTTTSTTC--SHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred HHCCCCCCCHHHHHHHHHHHCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_conf 64692109999999999975568788--99999998899999999998874499999998766888999--998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 765557740158998876303457662489
Q gi|254780753|r 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 (355)
Q Consensus 90 ~el~~l~~~le~LE~~~Lls~e~D~~nail 119 (355)
+++..+...+-.+--...|.|..++ |..|
T Consensus 201 ~~l~~~ll~lPNi~~~~vP~G~~e~-n~~v 229 (536)
T 3err_A 201 QKLEALLLQVPLPPWPGAPVGGEEA-NREI 229 (536)
T ss_dssp HHHHHHHTTCCCCCCTTSCCSSGGG-CEEE
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCC-CEEE
T ss_conf 9998898622587078889999867-8699
No 11
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=87.12 E-value=1.7 Score=22.77 Aligned_cols=23 Identities=9% Similarity=0.078 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02345667655577401589988
Q gi|254780753|r 83 SILQETSDNLQRIKLEVEYKQFE 105 (355)
Q Consensus 83 el~eE~~~el~~l~~~le~LE~~ 105 (355)
+.+..+...+..+...+..|+..
T Consensus 168 ~qi~~Lq~~l~elq~kIq~LE~q 190 (464)
T 1m1j_B 168 SSLRVLRAVIDSLHKKIQKLENA 190 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999
No 12
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=87.06 E-value=1.7 Score=22.75 Aligned_cols=91 Identities=9% Similarity=0.089 Sum_probs=42.9
Q ss_pred HCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCC-CHHH---HH
Q ss_conf 5498999999999999870866002589999999999889999999999999986399999-86310000-0023---45
Q gi|254780753|r 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL-ELALEEDD-CSIL---QE 87 (355)
Q Consensus 13 ~fDle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~-ELa~ee~D-~el~---eE 87 (355)
|+|+.-++...+.+...+..-+.-.|.....++.+-....+......+.++...+.+..-+ ++.+..++ .++. .+
T Consensus 1 MLDik~iRenpe~v~~~l~~R~~~~d~~~vd~ll~ld~~~r~l~~e~e~Lr~~rN~lSK~Ig~~kk~~~~~~~l~~~~~~ 80 (455)
T 2dq0_A 1 MLDIKLIRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSRE 80 (455)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHTCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHH
T ss_pred CCCHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 98978877699999999986499631557999999999999999999999999999999999998679978999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 6676555774015899
Q gi|254780753|r 88 TSDNLQRIKLEVEYKQ 103 (355)
Q Consensus 88 ~~~el~~l~~~le~LE 103 (355)
+.+++..++..+..++
T Consensus 81 lk~~ik~le~~l~~l~ 96 (455)
T 2dq0_A 81 IVKRIGELENEVEELK 96 (455)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999999
No 13
>1ses_A Seryl-tRNA synthetase; ligase(synthetase); HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=75.33 E-value=4.3 Score=19.85 Aligned_cols=54 Identities=13% Similarity=0.160 Sum_probs=34.7
Q ss_pred HCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 549899999999999987086600258999999999988999999999999998
Q gi|254780753|r 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 (355)
Q Consensus 13 ~fDle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l 66 (355)
|+|+.-++...+.+.+.+..-++=-|.++..++-.+...+...++.++.-++.+
T Consensus 1 MlDik~iR~n~e~v~~~l~~R~~~~dld~ll~Ld~~~r~l~~~~e~l~~~rN~l 54 (421)
T 1ses_A 1 MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQV 54 (421)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 989788875999999999865997068999999999999999999999999999
No 14
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=72.39 E-value=5.1 Score=19.37 Aligned_cols=56 Identities=11% Similarity=0.035 Sum_probs=37.7
Q ss_pred HHCCHHHHHHHHHHHHHHHHCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 654989999999999998708660---02589999999999889999999999999986
Q gi|254780753|r 12 GLFDWDNAVQRLSFLNTKTEDPHL---WQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 (355)
Q Consensus 12 ~~fDle~~~~rl~eLE~~lsdp~f---W~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~ 67 (355)
-|+|+..+++.-+.+.+.+..-++ ..|.++...+-+++..+...++.+..-++.+.
T Consensus 39 PMLDik~Irenpe~v~~~l~~R~~~~~~~dld~il~ld~e~r~l~~e~e~Lr~erN~~s 97 (501)
T 1wle_A 39 PLLDMESLCAYPEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEEEKEAVT 97 (501)
T ss_dssp CCCCHHHHHHSHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76279998769999999999728974334299999999999999999999999999999
No 15
>3lay_A Zinc resistance-associated protein; salmonella typhimurium LT2, ZRAP, periplasm, structural genomics; 2.70A {Salmonella enterica subsp}
Probab=62.98 E-value=7.7 Score=18.08 Aligned_cols=45 Identities=7% Similarity=0.207 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998639999986310000002345667655577401589988
Q gi|254780753|r 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 (355)
Q Consensus 59 ~~~l~~~l~Dl~eL~ELa~ee~D~el~eE~~~el~~l~~~le~LE~~ 105 (355)
..++...-.++..++ ..+..|++-+..+..++.++..++....++
T Consensus 91 r~qL~akr~EL~aLl--~~~~~D~akI~aL~~eI~~Lr~qL~~~R~~ 135 (175)
T 3lay_A 91 RQQLISKRYEYNALL--TASSPDTAKINAVAKEMESLGQKLDEQRVK 135 (175)
T ss_dssp HHHHHHHHHHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999997--179999999999999999999999999999
No 16
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, alternative splicing, amyloid, amyloidosis, blood coagulation, coiled coil; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=60.41 E-value=8.5 Score=17.77 Aligned_cols=20 Identities=15% Similarity=0.409 Sum_probs=8.7
Q ss_pred HHHHHHHHHHH-CCHHHHHHH
Q ss_conf 68999998865-498999999
Q gi|254780753|r 3 LSRQLNCLGGL-FDWDNAVQR 22 (355)
Q Consensus 3 L~~rl~~l~~~-fDle~~~~r 22 (355)
+.++++.|..- +++.+..+.
T Consensus 62 ~~~~i~~l~~~~~~~~~~~~~ 82 (562)
T 3ghg_A 62 FTNRINKLKNSLFEYQKNNKD 82 (562)
T ss_dssp HHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
T ss_conf 889999999999999988888
No 17
>1ywm_A C protein alpha-antigen; beta sandwich, fibronectin fold, antiparallel three-helix bundle, surface active protein; 1.86A {Streptococcus agalactiae A909} PDB: 2o0i_1
Probab=57.36 E-value=9.5 Score=17.42 Aligned_cols=43 Identities=14% Similarity=0.381 Sum_probs=29.6
Q ss_pred HCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 549899999999999987086600258999999999988999999
Q gi|254780753|r 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS 57 (355)
Q Consensus 13 ~fDle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~ 57 (355)
+.|...++.+++|+++...||. |+|..+ .++...+-.++.-++
T Consensus 120 ~Ydst~lrd~IdeV~~~a~Dpk-ws~~sr-deVl~gLe~IK~DId 162 (200)
T 1ywm_A 120 IYDSTTLRDKIEEVRTNANDPK-WTEESR-TEVLTGLDTIKTDID 162 (200)
T ss_dssp EECCHHHHHHHHHHHHHHTSTT-BCHHHH-HHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHCCCCCC-CCCCCH-HHHHHHHHHHHHHHH
T ss_conf 9687899989999984066887-774337-889988998866651
No 18
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, alternative splicing, amyloid, amyloidosis, blood coagulation, coiled coil; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=56.69 E-value=9.7 Score=17.34 Aligned_cols=19 Identities=5% Similarity=0.106 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 4566765557740158998
Q gi|254780753|r 86 QETSDNLQRIKLEVEYKQF 104 (355)
Q Consensus 86 eE~~~el~~l~~~le~LE~ 104 (355)
..+...+..+...+.+|+.
T Consensus 166 ~~LQ~~i~~l~~kIq~Leq 184 (461)
T 3ghg_B 166 RVLRSILENLRSKIQKLES 184 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999
No 19
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=54.94 E-value=10 Score=17.15 Aligned_cols=10 Identities=20% Similarity=0.281 Sum_probs=3.5
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999987
Q gi|254780753|r 21 QRLSFLNTKT 30 (355)
Q Consensus 21 ~rl~eLE~~l 30 (355)
.++.+|..++
T Consensus 67 ~~i~~l~~~l 76 (390)
T 1deq_A 67 SRINKLRDSL 76 (390)
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 20
>2hdl_A Small inducible cytokine B14; CXCL14, BRAK, chemokine; NMR {Homo sapiens}
Probab=53.96 E-value=5.8 Score=18.95 Aligned_cols=46 Identities=17% Similarity=0.278 Sum_probs=34.6
Q ss_pred HHHHHCCCC-CCCCEEEEEECCCC--CHHHHH-----HHHHHHHHHHHHHHHHH
Q ss_conf 887630345-76624899821778--702778-----99999998999987753
Q gi|254780753|r 104 FESLLSGEA-DSNDAYLEVHAGAG--GTESQD-----WANMLLRMYTRWAEKRK 149 (355)
Q Consensus 104 ~~~Lls~e~-D~~nailEI~AGaG--G~EA~d-----wA~~L~rMY~r~ae~~g 149 (355)
++.+|++|+ +..-+|+...-|++ |.+-|+ |+..|+.+|..|-+++.
T Consensus 21 lev~p~gp~C~~~EII~TLKn~~~~~G~~vCLdP~a~~vkklik~~~~~~~k~r 74 (78)
T 2hdl_A 21 LEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRFIKWYNAWNEKRR 74 (78)
T ss_dssp EEECCSSTTSSSCCEEEEECSSSTTTTSEEEECTTSHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf 999889998998589999603766778778768897799999999999876145
No 21
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus VF5}
Probab=50.05 E-value=12 Score=16.62 Aligned_cols=107 Identities=14% Similarity=0.208 Sum_probs=56.2
Q ss_pred HCCHHHHHHHHHHHHHHHHCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHH---H
Q ss_conf 549899999999999987086600--258999999999988999999999999998639999986310000-0023---4
Q gi|254780753|r 13 LFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD-CSIL---Q 86 (355)
Q Consensus 13 ~fDle~~~~rl~eLE~~lsdp~fW--~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl~eL~ELa~ee~D-~el~---e 86 (355)
|+|+.-++...+.+...+..-++= .+.++..++-.+...+...++.+..-++.+.. +.-.+.++.++ .++. .
T Consensus 1 MlDik~iRen~e~v~~~l~~R~~~~~~~id~il~Ld~~~r~l~~e~e~Lr~erN~iSK--eIg~~kk~~~~~~~l~~~~~ 78 (425)
T 2dq3_A 1 MIDINLIREKPDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLSK--EIGKLKREGKDTTEIQNRVK 78 (425)
T ss_dssp CCCHHHHHHCHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTGGGSSCSCTTTSTTHHH
T ss_pred CCCHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHCCCCHHHHHHHHH
T ss_conf 9897888769999999998709982555999999999999999999999999999999--99999867988999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH------HH--------HCCCCCCCCEEEEE
Q ss_conf 5667655577401589988------76--------30345766248998
Q gi|254780753|r 87 ETSDNLQRIKLEVEYKQFE------SL--------LSGEADSNDAYLEV 121 (355)
Q Consensus 87 E~~~el~~l~~~le~LE~~------~L--------ls~e~D~~nailEI 121 (355)
++.+++..++..+..++.+ .+ |.|+.+..|.++..
T Consensus 79 ~lk~~i~~le~~~~~i~~~l~~~ll~IPNi~~~~VP~G~de~dN~~i~~ 127 (425)
T 2dq3_A 79 ELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPSVPVGEDEKDNVEVRR 127 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCCTTSCCCSSGGGCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 9999999999999999999999997278987888899987225678833
No 22
>3ofo_I 30S ribosomal protein S9; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 3fih_I* 3iy8_I 2wwl_I 3ofp_I 2qal_I* 1p6g_I 1p87_I 2aw7_I 2avy_I 2i2u_I 2i2p_I* 2qan_I* 2qb9_I* 2qbb_I* 2qbd_I 2qbf_I 2qbh_I* 2qbj_I* 2qou_I* 2qow_I* ...
Probab=41.49 E-value=12 Score=16.71 Aligned_cols=29 Identities=21% Similarity=0.287 Sum_probs=21.0
Q ss_pred CCCCEEEEEEEEEEECCCCCCCCCCCCCCCEE
Q ss_conf 66650356688788503442221112345503
Q gi|254780753|r 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 (355)
Q Consensus 197 ~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl 228 (355)
-+.|||.||.|.|.+.|-- -.|.||..++
T Consensus 4 y~~GrRKtaiArv~l~~G~---G~i~IN~~~~ 32 (127)
T 3ofo_I 4 YGTGRRKSSAARVFIKPGN---GKIVINQRSL 32 (127)
T ss_dssp CCCCBCSSCEEEEEEESCC---SCBCTTSSCT
T ss_pred CCCCCCCCEEEEEEEEECC---EEEEECCEEH
T ss_conf 0206063489999999373---3899998408
No 23
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein, transferase; HET: TNA MTA; 1.66A {Methanothermobacterthermautotrophicus} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A*
Probab=38.18 E-value=18 Score=15.38 Aligned_cols=125 Identities=13% Similarity=0.102 Sum_probs=57.2
Q ss_pred HHHHHHHHHH---HCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Q ss_conf 6899999886---5498999999999999870866002589999999999889999999999999986---399999863
Q gi|254780753|r 3 LSRQLNCLGG---LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLILLELA 76 (355)
Q Consensus 3 L~~rl~~l~~---~fDle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~---Dl~eL~ELa 76 (355)
|.++++.+.. -++++.+...+.||+....+..+ |...++.+.+. ..++..+.....+..... +..-...++
T Consensus 13 i~~~l~~l~~~~~~~~~~~~~~~~~el~~l~~~~~i--d~~~~~~vl~~-~~i~~~~~~ir~~~~~~~~~lE~~~a~~l~ 89 (298)
T 3fpf_A 13 IASRLEGMNYHFDEMDTSGVMPLLDEIEEIAHDSTI--DFESAKHILDD-AEMNHALSLIRKFYVNLGMKLEMEKAQEVI 89 (298)
T ss_dssp HHHHHGGGTTCGGGCCTTTTHHHHHHHHHHHTCTTS--CHHHHHHHHHC-GGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE--CHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999984545556310378899999999985377601--29989876358-979999999999988888999999887552
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHH
Q ss_conf 10000002345667655577401589988763034576624899821778702778999
Q gi|254780753|r 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 (355)
Q Consensus 77 ~ee~D~el~eE~~~el~~l~~~le~LE~~~Lls~e~D~~nailEI~AGaGG~EA~dwA~ 135 (355)
..++.-..+.. ---.... .++-++|+.++--. ..+-+++|=+|+|+.-+...|.
T Consensus 90 ~~~~p~~~l~~-fp~y~~y-~~l~~~e~~~~~l~---~g~rVLdiGcG~g~~t~~~~a~ 143 (298)
T 3fpf_A 90 ESDSPWETLRS-FYFYPRY-LELLKNEAALGRFR---RGERAVFIGGGPLPLTGILLSH 143 (298)
T ss_dssp HCSSHHHHHHT-STTHHHH-HHHHHHHHHHTTCC---TTCEEEEECCCSSCHHHHHHHH
T ss_pred CCCCHHHHHHC-CCCCCHH-HHHHHHHHHHCCCC---CCCEEEEEECCCHHHHHHHHHH
T ss_conf 48987888543-8884249-99999999854899---9998999606856999999985
No 24
>2vqe_I 30S ribosomal protein S9, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: d.14.1.1 PDB: 1gix_L* 1hnw_I* 1hnx_I* 1hnz_I* 1hr0_I 1i94_I* 1i95_I* 1i96_I* 1i97_I* 1ibk_I* 1ibl_I* 1ibm_I 1j5e_I 1jgo_L* 1jgp_L* 1jgq_L* 1ml5_L* 1n32_I* 1n33_I* 1n34_I ...
Probab=38.16 E-value=11 Score=16.96 Aligned_cols=28 Identities=14% Similarity=0.348 Sum_probs=20.2
Q ss_pred CCCEEEEEEEEEEECCCCCCCCCCCCCCCEE
Q ss_conf 6650356688788503442221112345503
Q gi|254780753|r 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 (355)
Q Consensus 198 s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl 228 (355)
+.|||.||+|.|.+.|-- -.|.||..++
T Consensus 6 ~~GrRKta~Arv~l~~G~---G~I~INg~~~ 33 (128)
T 2vqe_I 6 GTGRRKEAVARVFLRPGN---GKVTVNGQDF 33 (128)
T ss_dssp ECCEETTEEEEEEEEESS---CCEEESSSBH
T ss_pred EECCCCCEEEEEEEECCE---EEEEECCEEH
T ss_conf 857460389999998581---5799999869
No 25
>3jyv_I 40S ribosomal protein S16(A); eukaryotic ribosome, RACK1 protein, flexible fitting; HET: 2MG H2U M2G OMC OMG YYG PSU 5MC 7MG 5MU 1MA; 8.90A {Thermomyces lanuginosus} PDB: 1s1h_I
Probab=37.75 E-value=10 Score=17.19 Aligned_cols=29 Identities=10% Similarity=0.054 Sum_probs=22.0
Q ss_pred CCCCEEEEEEEEEEECCCCCCCCCCCCCCCEE
Q ss_conf 66650356688788503442221112345503
Q gi|254780753|r 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 (355)
Q Consensus 197 ~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl 228 (355)
.+.|||.||.|.|.+.|- +-.|.||..++
T Consensus 3 ~~~GrRKta~A~v~l~~G---~G~i~INg~~~ 31 (138)
T 3jyv_I 3 QTFGKKKSATAVAHVKAG---KGLIKVNGSPI 31 (138)
T ss_dssp CCCCCSSSCEEEEEEEES---CCCEEETTEEH
T ss_pred EEECCCCCEEEEEEEECC---CCEEEECCCCH
T ss_conf 417648318999999828---55699999115
No 26
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreductase, antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=35.94 E-value=20 Score=15.14 Aligned_cols=36 Identities=14% Similarity=0.087 Sum_probs=21.2
Q ss_pred EEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCC
Q ss_conf 0101206898730466665035668878850344222
Q gi|254780753|r 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 (355)
Q Consensus 182 k~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~ 218 (355)
++-|.+|||+.-|.....++.-.|+| .++-|..+..
T Consensus 237 ~~~s~~HRVv~p~~~~~~~~~R~S~~-~F~~P~~d~~ 272 (311)
T 1dcs_A 237 QVKAPRHHVAAPRRDQIAGSSRTSSV-FFLRPNADFT 272 (311)
T ss_dssp CSCCCCEEECCC----CTTCCEEEEE-EEECCCTTCE
T ss_pred CCCCCCCEEECCCCCCCCCCCEEEEE-EEECCCCCCE
T ss_conf 70586875617866668899768999-9970899968
No 27
>1vq8_D 50S ribosomal protein L5P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.77.1.1 PDB: 1vq4_D* 1vq5_D* 1vq6_D* 1vq7_D* 1s72_D* 1vq9_D* 1vqk_D* 1vql_D* 1vqm_D* 1vqn_D* 1vqo_D* 1vqp_D* 1yhq_D* 1yi2_D* 1yij_D* 1yit_D* 1yj9_D* 1yjn_D* 1yjw_D* 2otj_D* ...
Probab=33.17 E-value=9.9 Score=17.27 Aligned_cols=73 Identities=16% Similarity=0.229 Sum_probs=40.9
Q ss_pred CCCCCCEEEEEEEEECCCCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 45458501346885055610000010120689873046666503566887885034422211123455036998538
Q gi|254780753|r 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 (355)
Q Consensus 159 ~~e~~GiK~~~~~I~G~~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rs 235 (355)
.|..-|+| +.+.|+.+|.+|.-=-.+- ..++..||.+|-..-.---..++|+++-+..+.|.-=|+-|.|-|.
T Consensus 66 kG~pIG~k---VTLRg~~m~~FL~kll~~v-~~~~k~FD~~GN~sfGi~e~~~FPei~~d~~~~i~GmdIti~t~~~ 138 (177)
T 1vq8_D 66 EGDPIGAK---VTLRDEMAEEFLQTALPLA-ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRP 138 (177)
T ss_dssp SSSEEEEE---EEECTHHHHHHHHHHGGGS-CCCGGGBCSSSCEEEC--------------------CEEEEEEECG
T ss_pred CCCEEEEE---EEEEHHHHHHHHHHHHHHC-CCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 79825899---9973888999999985224-8885454898648878278833664420466772011799995889
No 28
>2zkq_i 40S ribosomal protein S16E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=31.72 E-value=12 Score=16.57 Aligned_cols=29 Identities=10% Similarity=-0.051 Sum_probs=21.4
Q ss_pred CCCCEEEEEEEEEEECCCCCCCCCCCCCCCEE
Q ss_conf 66650356688788503442221112345503
Q gi|254780753|r 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 (355)
Q Consensus 197 ~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl 228 (355)
.+.|||.||.|.|.+.|-- -.|.||..++
T Consensus 11 ~~~GrRKtaiArv~l~~G~---G~i~INgk~~ 39 (146)
T 2zkq_i 11 QVFGRKKTATAVAHCKRGN---GLIKVNGRPL 39 (146)
T ss_dssp EECCBCSSCEEEEEEEESS---SCEEETTEEH
T ss_pred EEECCCEEEEEEEEEEECC---CCEEECCCCH
T ss_conf 9967460389999999276---6589879458
No 29
>2pc6_A Probable acetolactate synthase isozyme III (small subunit); regulatory subunit, structural genomics, PSI; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=31.18 E-value=18 Score=15.43 Aligned_cols=64 Identities=23% Similarity=0.307 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC-----CCHHHEEECCEEEEEEECCCCCCCE
Q ss_conf 9998999987753113444205454585013468850556-----1000001012068987304666650
Q gi|254780753|r 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQGVHRLVRISPYDSNSR 201 (355)
Q Consensus 137 L~rMY~r~ae~~gwk~evi~~~~~e~~GiK~~~~~I~G~~-----ayg~Lk~E~GvHRv~Ri~~~~s~gR 201 (355)
|.|.=. -..++||+.+-+...+++..|+...|+-+.|+. +-..|.-=--||.|+.+.+.++=.|
T Consensus 18 L~rv~g-lFsrRg~NIeSL~v~~te~~~iSR~Tiv~~g~~~~i~qi~kQL~KLidV~~V~dlt~~~~v~r 86 (165)
T 2pc6_A 18 LSRVAG-LFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQLNKLIEVVKLIDLSSEGYVER 86 (165)
T ss_dssp HHHHHH-HHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHHHHHSTTEEEEEEGGGSCEEEE
T ss_pred HHHHHH-HHHHCCCCEEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEE
T ss_conf 999999-986267435788873247998079999997788999999999967846799994588540355
No 30
>3bbn_I Ribosomal protein S9; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=29.83 E-value=18 Score=15.50 Aligned_cols=29 Identities=14% Similarity=0.106 Sum_probs=20.4
Q ss_pred CCCCEEEEEEEEEEECCCCCCCCCCCCCCCEE
Q ss_conf 66650356688788503442221112345503
Q gi|254780753|r 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 (355)
Q Consensus 197 ~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl 228 (355)
-.-|||.||.|.|.+.|-- -.|.||..++
T Consensus 73 ~gtGRRKtAiArV~l~~Gs---GkI~INgk~l 101 (197)
T 3bbn_I 73 IGTGRRKCAIARVVLQEGT---GKFIINYRDA 101 (197)
T ss_dssp CCCCEETTEEEEEEEEESS---CCEEETTEEH
T ss_pred EEECCCCCEEEEEEEEECC---EEEEECCCCH
T ss_conf 8646881579999998074---3899999348
No 31
>1m0d_A Endonuclease, endodeoxyribonuclease I; holliday junction resolvase, homodimer, domain swapped, composite active site, hydrolase; 1.90A {Enterobacteria phage T7} SCOP: c.52.1.17 PDB: 1m0i_A 2pfj_A 1fzr_A 3cae_A
Probab=28.77 E-value=15 Score=15.93 Aligned_cols=12 Identities=33% Similarity=0.542 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999987753113
Q gi|254780753|r 141 YTRWAEKRKFKT 152 (355)
Q Consensus 141 Y~r~ae~~gwk~ 152 (355)
|-.||+++||++
T Consensus 98 Ya~Wc~k~gf~w 109 (138)
T 1m0d_A 98 YGEFCEKHGIKF 109 (138)
T ss_dssp HHHHHHHHTCCE
T ss_pred HHHHHHHCCCCC
T ss_conf 999998749863
No 32
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=27.24 E-value=27 Score=14.15 Aligned_cols=11 Identities=18% Similarity=0.075 Sum_probs=4.2
Q ss_pred EEEEEECCCCC
Q ss_conf 48998217787
Q gi|254780753|r 117 AYLEVHAGAGG 127 (355)
Q Consensus 117 ailEI~AGaGG 127 (355)
-++...-|.-|
T Consensus 821 ~IvQF~yG~Dg 831 (1407)
T 3lu0_D 821 MMTPVIEGGDV 831 (1407)
T ss_dssp EEEESSCCCSS
T ss_pred EEEEEECCCCC
T ss_conf 89995128732
No 33
>1mqv_A Cytochrome C'; four-helix bundle, electron transport; HET: HEM; 1.78A {Rhodopseudomonas palustris} SCOP: a.24.3.2 PDB: 1a7v_A*
Probab=25.23 E-value=29 Score=13.90 Aligned_cols=45 Identities=9% Similarity=0.182 Sum_probs=26.5
Q ss_pred HHHHHHHHHC------CHHHHHHHHHHHHHHH------------------HCCCCCCCHHHHHHHHHHH
Q ss_conf 9999988654------9899999999999987------------------0866002589999999999
Q gi|254780753|r 5 RQLNCLGGLF------DWDNAVQRLSFLNTKT------------------EDPHLWQNVIEAKMLMRER 49 (355)
Q Consensus 5 ~rl~~l~~~f------Dle~~~~rl~eLE~~l------------------sdp~fW~D~~kAqkl~KE~ 49 (355)
..+..|+.|+ |.+........|.... +.|++|.|++.+......+
T Consensus 17 ~~~~~l~~m~kg~~~~d~~~~~~~a~~l~~~a~~~~~~Fp~~s~~~~~s~A~p~IW~~~~~F~~~~~~~ 85 (125)
T 1mqv_A 17 EATKPIAAMLKGEAKWDQAVVQKSLAAIADDSKKLPALFPADSKTGGDTAALPKIFEDKAKFDDLFAKL 85 (125)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHGGGSCCGGGTTCSSCCBCGGGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHH
T ss_conf 999999999868998889999999999999877538757899988876543518887899899999999
No 34
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for structural proteomics; NMR {Agrobacterium tumefaciens str}
Probab=24.82 E-value=14 Score=16.26 Aligned_cols=15 Identities=7% Similarity=0.282 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999877531134442
Q gi|254780753|r 142 TRWAEKRKFKTEALE 156 (355)
Q Consensus 142 ~r~ae~~gwk~evi~ 156 (355)
.+||+++||.++|++
T Consensus 65 i~yA~k~g~~y~V~e 79 (106)
T 2jya_A 65 EAYAQRKGIEYRVIL 79 (106)
T ss_dssp HHHHHHHTCEEEECC
T ss_pred HHHHHHCCCEEEEEC
T ss_conf 999998698399975
No 35
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=24.31 E-value=31 Score=13.79 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECC-----CCCHHHEEECCEEEEEEECCCCCCCEEEEEEEEEEE
Q ss_conf 999899998775311344420545458501346885055-----610000010120689873046666503566887885
Q gi|254780753|r 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 (355)
Q Consensus 137 L~rMY~r~ae~~gwk~evi~~~~~e~~GiK~~~~~I~G~-----~ayg~Lk~E~GvHRv~Ri~~~~s~gR~hTS~a~V~V 211 (355)
|.|.=- -+.++||+.+-+...+++..|+...|+-+.|+ .+-..|.-=--||.|+.+.+.+.-.|-. -.+-|.+
T Consensus 17 L~Rv~g-lFsrRg~NI~SL~v~~te~~~~SR~Tiv~~g~~~~i~qi~kQL~KlidVi~V~~~~~~~~v~rEl-~LiKv~~ 94 (164)
T 2f1f_A 17 LSRVIG-LFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREI-MLVKIQA 94 (164)
T ss_dssp HHHHHH-HHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEGGGSCEEEEEE-EEEEEEC
T ss_pred HHHHHH-HHHCCCCCEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEE-EEEEEEC
T ss_conf 999999-98516754567887233799917999999899999999999983773589985189986688899-9999962
No 36
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=23.73 E-value=31 Score=13.71 Aligned_cols=56 Identities=11% Similarity=0.037 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 49899999999999987086600258999999999988999999999999998639
Q gi|254780753|r 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 (355)
Q Consensus 14 fDle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l~Dl 69 (355)
.+++.+..=+.+.+..+..+++-+|+..++.+.+.+..+...|..+......+.+.
T Consensus 11 ~~~~el~~Wi~~~~~~l~~~~~~~d~~~v~~~l~~h~~~~~ei~~~~~~v~~i~~~ 66 (185)
T 3lbx_B 11 SMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLEL 66 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_conf 99999999999899996199889999999999999999999999887999999999
No 37
>1dp7_P MHC class II transcription factor HRFX1; winged helix, protein- DNA conovel mode of DNA recognition, transcription/DNA complex; HET: DNA BRU; 1.50A {Synthetic} SCOP: a.4.5.20
Probab=22.98 E-value=32 Score=13.61 Aligned_cols=20 Identities=15% Similarity=0.154 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999899998775311
Q gi|254780753|r 132 DWANMLLRMYTRWAEKRKFK 151 (355)
Q Consensus 132 dwA~~L~rMY~r~ae~~gwk 151 (355)
.=..+|+..|..||++.|++
T Consensus 17 vpr~~lY~~Y~~~C~~~~~~ 36 (76)
T 1dp7_P 17 LPRSTLYNHYLLHSQEQKLE 36 (76)
T ss_dssp EEHHHHHHHHHHHHHHTTCC
T ss_pred EEHHHHHHHHHHHHHHCCCC
T ss_conf 60799999999999985996
No 38
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=22.63 E-value=33 Score=13.57 Aligned_cols=52 Identities=13% Similarity=0.158 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9899999999999987086600258999999999988999999999999998
Q gi|254780753|r 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 (355)
Q Consensus 15 Dle~~~~rl~eLE~~lsdp~fW~D~~kAqkl~KE~s~L~~iV~~~~~l~~~l 66 (355)
+++.+..-+.+.+..++.+++.+|+..++.+.+++..+...|.........+
T Consensus 21 ~~~el~~Wl~~~e~~l~~~~~~~d~~~~e~~l~~~~~l~~ei~~~~~~v~~l 72 (218)
T 3fb2_A 21 DFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAF 72 (218)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999997299999999999999999999999999728999999
No 39
>2xl6_A Cytochrome C'; electron transport, haemoprotein, 4-helix bundle; HET: HEC SO4; 1.07A {Achromobacter xylosoxidans} PDB: 2xlh_A* 2xm4_A* 2xlo_A* 2xlw_A* 2xld_A* 2xle_A* 2xm0_A* 2xlm_A* 1e83_A* 1e84_A* 1e86_A* 1e85_A* 2xl8_A* 2xlv_A* 1cgo_A* 1cgn_A*
Probab=22.61 E-value=33 Score=13.56 Aligned_cols=45 Identities=13% Similarity=0.245 Sum_probs=25.4
Q ss_pred HHHHHHHHHC------CHHHHHHHHHHHHHHHH---------------CCCCCCCHHHHHHHHHHH
Q ss_conf 9999988654------98999999999999870---------------866002589999999999
Q gi|254780753|r 5 RQLNCLGGLF------DWDNAVQRLSFLNTKTE---------------DPHLWQNVIEAKMLMRER 49 (355)
Q Consensus 5 ~rl~~l~~~f------Dle~~~~rl~eLE~~ls---------------dp~fW~D~~kAqkl~KE~ 49 (355)
..+..|+.|+ |.+........|..... .|.+|+|+..+..+...+
T Consensus 21 ~~~~~l~~m~kg~~~~d~~~~~~~a~~l~~~a~~~~~~Fp~gs~~s~Ak~~IW~~~~~F~~~~~~~ 86 (127)
T 2xl6_A 21 SHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALPWAAFGPGTEGGDARPEIWSDAASFKQKQQAF 86 (127)
T ss_dssp HHHHTTHHHHTTSSCCCHHHHHHHHHHHHHHHTSTGGGGSTTCCCSSSCTHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHHHH
T ss_conf 999999999869988899999999999999867309757999986645679885999899999999
No 40
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=21.63 E-value=34 Score=13.43 Aligned_cols=24 Identities=13% Similarity=0.192 Sum_probs=13.6
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCEEC
Q ss_conf 22210130158568331111472507
Q gi|254780753|r 308 WGRQIRSYVLQPYQMVKDLRTNIEKT 333 (355)
Q Consensus 308 ~g~~iRtY~~~p~~~v~DhR~~~~~~ 333 (355)
.|.+-|.|.+-| .+.|-|-+.-++
T Consensus 295 ~g~~~~~~~~~~--v~~~d~p~~~~~ 318 (341)
T 3ktd_A 295 SGQRRAKESVSP--TITSSRPVLRLH 318 (341)
T ss_dssp SCC--------------CCCCEEEEC
T ss_pred CCCCCCCCEECC--CCCCCCCCCCCC
T ss_conf 588755431322--014788631258
No 41
>1gqa_A Cytochrome C'; electron transport, heme; HET: HEC; 1.8A {Rhodobacter sphaeroides} SCOP: a.24.3.2
Probab=21.48 E-value=34 Score=13.41 Aligned_cols=47 Identities=19% Similarity=0.080 Sum_probs=25.6
Q ss_pred HHHHHHHHHHC------CHHHHHHHHHHHHHHH---------------------HCCCCCCCHHHHHHHHHHHH
Q ss_conf 89999988654------9899999999999987---------------------08660025899999999998
Q gi|254780753|r 4 SRQLNCLGGLF------DWDNAVQRLSFLNTKT---------------------EDPHLWQNVIEAKMLMRERQ 50 (355)
Q Consensus 4 ~~rl~~l~~~f------Dle~~~~rl~eLE~~l---------------------sdp~fW~D~~kAqkl~KE~s 50 (355)
...+..|+.|+ |-+........|.... +.|.+|+|++.+......+.
T Consensus 18 ~~~~~~l~~m~kg~~~~d~~~~~~~a~~l~~~a~~~~~~~Fp~gs~~~~~~~s~A~~~IW~~~~~F~~~a~~~~ 91 (130)
T 1gqa_A 18 ALEFGPLAAMAKGEMPYDAAAAKAHASDLVTLTKYDPSDLYAPGTSADDVKGTAAKAAIWQDADGFQAKGMAFF 91 (130)
T ss_dssp HHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHSCGGGGGCTTCSTTTSSSCCBCTHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHH
T ss_conf 99899999998799878999999999999998621101358999876778877354578878998999999999
No 42
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A*
Probab=20.87 E-value=20 Score=15.10 Aligned_cols=17 Identities=6% Similarity=0.044 Sum_probs=8.3
Q ss_pred HHHHHHHHHHCCCCCCCC
Q ss_conf 753113444205454585
Q gi|254780753|r 147 KRKFKTEALEIHDGEEAG 164 (355)
Q Consensus 147 ~~gwk~evi~~~~~e~~G 164 (355)
++|++|.|++..+ ..||
T Consensus 50 k~G~~V~v~Ek~~-~iGG 66 (397)
T 3hdq_A 50 SSGQRVLIVDRRP-HIGG 66 (397)
T ss_dssp HTTCCEEEECSSS-SSSG
T ss_pred HCCCCEEEEECCC-CCCC
T ss_conf 5899679997689-7706
No 43
>2j8w_A Cytochrome C'; heme, iron, transport, metal-binding, electron transfer, electron transport; HET: HEM; 1.29A {Rubrivivax gelatinosus} SCOP: a.24.3.2 PDB: 1jaf_A* 2j9b_A*
Probab=20.65 E-value=36 Score=13.29 Aligned_cols=47 Identities=13% Similarity=0.297 Sum_probs=24.6
Q ss_pred HHHHHHHHHHC------CHHHHHHHHHHHHHHHH------------------CCCCCCCHHHHHHHHHHHH
Q ss_conf 89999988654------98999999999999870------------------8660025899999999998
Q gi|254780753|r 4 SRQLNCLGGLF------DWDNAVQRLSFLNTKTE------------------DPHLWQNVIEAKMLMRERQ 50 (355)
Q Consensus 4 ~~rl~~l~~~f------Dle~~~~rl~eLE~~ls------------------dp~fW~D~~kAqkl~KE~s 50 (355)
...+..|+.|+ |.+........|..... .|++|.|+..+......+.
T Consensus 20 ~~~~~~l~~m~kg~~~~d~~~~~~~a~~l~~~a~~~~~~F~~gs~~~~~t~A~p~IW~d~~~F~~~~~~~~ 90 (129)
T 2j8w_A 20 ANHFGRVAAMAQGKAPFDAKVAAENIALVSTLSKLPLTAFGPGTDKGHGTEAKPAVWSDAAGFKAAADKFA 90 (129)
T ss_dssp HHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHTSGGGSCCTTCCSSTTCCBCTHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHH
T ss_conf 99999999997799988899999999999988001085478988888877658898869998999999999
No 44
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, monomer, lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=20.35 E-value=23 Score=14.62 Aligned_cols=46 Identities=11% Similarity=0.212 Sum_probs=28.9
Q ss_pred EEEEEECCCCCHHHHHH-HHHHHHHHHHHHHHHH--------HHHHHHHCCCCCCC
Q ss_conf 48998217787027789-9999998999987753--------11344420545458
Q gi|254780753|r 117 AYLEVHAGAGGTESQDW-ANMLLRMYTRWAEKRK--------FKTEALEIHDGEEA 163 (355)
Q Consensus 117 ailEI~AGaGG~EA~dw-A~~L~rMY~r~ae~~g--------wk~evi~~~~~e~~ 163 (355)
-++|+--|-.+-= -|| +..|-+++..+..+++ =++-|+-.+.||-|
T Consensus 111 ~vlELfHGPT~aF-KD~a~q~~~~l~~~~l~~~~~~~~~~~~~~~~il~ATSGDTG 165 (514)
T 1kl7_A 111 HILELFHGPTYAF-KDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVGATSGDTG 165 (514)
T ss_dssp EEEECCCSTTSBT-HHHHHHHHHHHHHHHHHHHHTTSCSSSCCCEEEEEECSSSHH
T ss_pred EEEEECCCCCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCH
T ss_conf 8998304898772-455788899999999986144323456753799982887519
Done!