BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus str. psy62] (355 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus str. psy62] gi|254040430|gb|ACT57226.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus str. psy62] Length = 355 Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/355 (100%), Positives = 355/355 (100%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK Sbjct: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE Sbjct: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW Sbjct: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG Sbjct: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE Sbjct: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK Sbjct: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 >gi|315121916|ref|YP_004062405.1| peptide chain release factor 2 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495318|gb|ADR51917.1| peptide chain release factor 2 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 354 Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust. Identities = 296/349 (84%), Positives = 329/349 (94%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 +NCLGGLFDWDNA++RL FLN K E+P+LW+ V EAK+LMRERQHLDNA+S +K +QDRL Sbjct: 1 MNCLGGLFDWDNALKRLHFLNDKAENPNLWEKVEEAKILMRERQHLDNAVSSLKALQDRL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 DN+ LL+LA+EE++ S+LQE+ DNL+++KL+ EYKQFESL SGEADSND YLEVHAGAG Sbjct: 61 DDNIALLDLAVEENNSSVLQESLDNLKQLKLDTEYKQFESLFSGEADSNDVYLEVHAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWANML+RMY RW+E+RKFK + LE+HDGEEAGIKSATLLIKGPNAYGWLK EQG Sbjct: 121 GTESQDWANMLVRMYIRWSERRKFKIDLLEVHDGEEAGIKSATLLIKGPNAYGWLKEEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISPYDSNSRRHTSFSS+WVYPVVD+SIEIEI+ESDCRIDTYRASGAGGQHVNTT Sbjct: 181 VHRLVRISPYDSNSRRHTSFSSVWVYPVVDESIEIEINESDCRIDTYRASGAGGQHVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY+LELQKREEIANIGESSKTEI Sbjct: 241 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYDLELQKREEIANIGESSKTEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 GWGRQIRSYVLQPYQMVKDLRTNIEK+SP DVL+GDLDDFMKA LA+KK Sbjct: 301 GWGRQIRSYVLQPYQMVKDLRTNIEKSSPLDVLNGDLDDFMKAALALKK 349 >gi|241204131|ref|YP_002975227.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858021|gb|ACS55688.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 376 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 244/339 (71%), Positives = 293/339 (86%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DWD A++RL +LN K EDP+LW + EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+ Sbjct: 23 LDWDQAIRRLDWLNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EE D S+++E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDW Sbjct: 83 ELGEEEGDQSVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRI Sbjct: 143 ANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRIT Sbjct: 203 SPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+ +SKTEIGWG QIR Sbjct: 263 HIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQMVKDLRT + ++P DVLDGDL++FM+A LA Sbjct: 323 SYVLQPYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALA 361 >gi|319783261|ref|YP_004142737.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169149|gb|ADV12687.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 376 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 232/339 (68%), Positives = 284/339 (83%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FDWD A++RL +LN + ED LW +EA+ LMRERQ L+ I+ +K + L DN+ L+ Sbjct: 23 FDWDQAIKRLEYLNVRAEDASLWNEPLEAQKLMRERQSLEEGIASVKGLTQALEDNIGLI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EE D ++ E ++ ++ E + +Q E+LLSGEADSND YLE+HAGAGGTESQDW Sbjct: 83 ELGEEERDEGVIAEAEAAIRSMQGEAKARQVETLLSGEADSNDTYLEIHAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLRMYTRWAE+R+FK E LE+HDGEEAGIKSATL+IKG NAYGW+K E GVHRLVRI Sbjct: 143 ASMLLRMYTRWAERRRFKVEVLEMHDGEEAGIKSATLMIKGHNAYGWMKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDSN+RRHTSF+S+WVYPV+DD+IEI++SESD RIDTYR+SG+GGQHVNTTDSAVRIT Sbjct: 203 SPYDSNARRHTSFASVWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+ TG+ V CQ ERSQHKNKA+AW MLR++LYE EL+KRE +AN E+SK++IGWG QIR Sbjct: 263 HLATGIAVACQAERSQHKNKAKAWEMLRSRLYEEELKKREAVANATEASKSDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQ+VKDLRT +E TSPS VLDGDLDDFM+A+L+ Sbjct: 323 SYVLQPYQLVKDLRTGVESTSPSSVLDGDLDDFMEASLS 361 >gi|327190272|gb|EGE57372.1| peptide chain release factor 2 [Rhizobium etli CNPAF512] Length = 342 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 237/327 (72%), Positives = 284/327 (86%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP+LW + EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S++ Sbjct: 1 MNNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDLSVV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA++YE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRT + T+P DVLDGDL++FM+A LA Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALA 327 >gi|218660225|ref|ZP_03516155.1| peptide chain release factor 2 [Rhizobium etli IE4771] Length = 350 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 237/327 (72%), Positives = 284/327 (86%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP+LW + EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S++ Sbjct: 1 MNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA++YE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRT + T+P DVLDGDL++FM+A LA Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALA 327 >gi|15888668|ref|NP_354349.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58] gi|15156400|gb|AAK87134.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58] Length = 342 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 231/327 (70%), Positives = 281/327 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP LW + EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL E D I+ Sbjct: 1 MNNKAEDPTLWNDASEAQKLMRERQQLDDSINGVKALEQQLKDNIELIELGEMEGDDEIV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 ++ D L+ ++ E +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KDAEDALKALRSEANRRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E++ FK E LEIHDG+EAGIKSAT+L+KG NA+GW+K E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQGFKVEVLEIHDGDEAGIKSATILVKGHNAFGWMKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQ Sbjct: 181 FSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA+LYE+ELQKREE AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARLYEVELQKREEAANAQAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRT +E T+P +VLDGDL++FM+A LA Sbjct: 301 LRTGVESTAPGNVLDGDLNEFMEAALA 327 >gi|209548908|ref|YP_002280825.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534664|gb|ACI54599.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 376 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 240/339 (70%), Positives = 291/339 (85%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DWD A++RL +LN K EDP+LW + EA+ LMRERQ LD+ IS +K+++ +L DN+ L+ Sbjct: 23 LDWDQAIRRLDWLNNKAEDPNLWNDSTEAQKLMRERQQLDDGISGVKQLEQQLNDNIELI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EE D +++E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDW Sbjct: 83 ELGEEEGDEGVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRI Sbjct: 143 ANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E DCRIDTYR+SGAGGQHVNTTDSAVRIT Sbjct: 203 SPYDSNARRHTSFSSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+PTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+ +SKT+IGWG QIR Sbjct: 263 HMPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQ+VKDLRT + T+P DVLDG+L++FM+A LA Sbjct: 323 SYVLQPYQLVKDLRTGVASTAPDDVLDGELNEFMEAALA 361 >gi|325292702|ref|YP_004278566.1| peptide chain release factor 2 [Agrobacterium sp. H13-3] gi|325060555|gb|ADY64246.1| peptide chain release factor 2 [Agrobacterium sp. H13-3] Length = 342 Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust. Identities = 229/327 (70%), Positives = 279/327 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP LW + EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL E D I+ Sbjct: 1 MNNKAEDPTLWNDATEAQKLMRERQQLDDSINGVKALEQQLKDNVELIELGEMEGDDEIV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 ++ D L+ ++ E +Q E++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KDAEDALKALRSEANRRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 ++ FK E LE+HDGEEAGIKSAT+L+KG NA+GWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 DREGFKVEVLEVHDGEEAGIKSATILVKGHNAFGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSS+WVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQ Sbjct: 181 FSSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA+LYE+ELQKRE+ AN +SKT+IGWG QIRSYVLQPYQ++KD Sbjct: 241 ERSQHKNRAKAWDMLRARLYEVELQKREDAANAQAASKTDIGWGHQIRSYVLQPYQLIKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRT +E T+P +VLDGDL+ FM+A LA Sbjct: 301 LRTGVESTAPGNVLDGDLNQFMEAALA 327 >gi|116251510|ref|YP_767348.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae 3841] gi|115256158|emb|CAK07239.1| putative peptide chain release factor 2 (rf-2) [Rhizobium leguminosarum bv. viciae 3841] Length = 342 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 237/327 (72%), Positives = 284/327 (86%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP+LW + EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S++ Sbjct: 1 MNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA++YE EL+KRE+ A+ +SKTEIGWG QIRSYVLQPYQMVKD Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWGHQIRSYVLQPYQMVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRT + ++P DVLDGDL++FM+A LA Sbjct: 301 LRTGVASSAPDDVLDGDLNEFMEAALA 327 >gi|222085647|ref|YP_002544177.1| peptide chain release factor 2 [Agrobacterium radiobacter K84] gi|221723095|gb|ACM26251.1| peptide chain release factor 2 [Agrobacterium radiobacter K84] Length = 345 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 233/330 (70%), Positives = 284/330 (86%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + +LN K+EDP+LW + EA+ LMRERQ LD+ IS ++ ++ ++ DN+ L+EL EE D Sbjct: 1 MDWLNNKSEDPNLWNDATEAQKLMRERQQLDDGISGVRALEQQVADNVELIELGEEEGDA 60 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +++E + L+ +K E +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYT Sbjct: 61 DVVREAEEALKALKTEAARRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYT 120 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RR Sbjct: 121 RWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARR 180 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSFSSIW+YPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQ Sbjct: 181 HTSFSSIWIYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQ 240 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQQERSQHKN+A+AW+MLRA++YE EL KREE AN +SKT+IGWG QIRSYVLQPYQ+ Sbjct: 241 CQQERSQHKNRAKAWDMLRARMYEAELMKREEAANAEAASKTDIGWGHQIRSYVLQPYQL 300 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 VKDLRT + T+P DVLDGDL++FM+A LA Sbjct: 301 VKDLRTGVTSTAPDDVLDGDLNEFMEAALA 330 >gi|222148341|ref|YP_002549298.1| peptide chain release factor 2 [Agrobacterium vitis S4] gi|221735329|gb|ACM36292.1| peptide chain release factor 2 [Agrobacterium vitis S4] Length = 344 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 230/330 (69%), Positives = 281/330 (85%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + +LN K EDP+LW + EA+ LMRERQ L+++I+ ++ ++ ++ DN+ L+E+ EE D Sbjct: 1 MDWLNNKAEDPNLWNDAAEAQKLMRERQQLEDSIAGVRRLEQQMKDNIELIEMGEEEGDE 60 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 SI++E D L+ +K E Q E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYT Sbjct: 61 SIVKEAEDGLKALKAESGKLQVEAMLSGEADGNDTYVEVHSGAGGTESQDWANMLLRMYT 120 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAE+ FK E LE+HDGEEAGIKSAT+L+KG NAYGW+K E GVHRLVRISPYDSN+RR Sbjct: 121 RWAERSGFKVELLEVHDGEEAGIKSATILVKGHNAYGWMKTESGVHRLVRISPYDSNARR 180 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSFSSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIP+G+ V Sbjct: 181 HTSFSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPSGIAVS 240 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQQERSQHKNKA+AW+MLRA+LYE+EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+ Sbjct: 241 CQQERSQHKNKAKAWDMLRARLYEVELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQL 300 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 VKDLRT +E T+P DVL+GD+ FM+A LA Sbjct: 301 VKDLRTGVESTAPDDVLNGDISPFMEAALA 330 >gi|227821685|ref|YP_002825655.1| peptide chain release factor 2 [Sinorhizobium fredii NGR234] gi|227340684|gb|ACP24902.1| peptide chain release factor 2 protein [Sinorhizobium fredii NGR234] Length = 342 Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust. Identities = 230/327 (70%), Positives = 280/327 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP LW + EA+ LMRERQ LD++I+ ++ + +L DN+ L+EL EE D +I+ Sbjct: 1 MNNKAEDPTLWNDAGEAQKLMRERQQLDDSITGLRRFEQQLSDNIELIELGEEEGDSAIV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L++++ E KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMY+RWA Sbjct: 61 TEAEEALRQLRNEASKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYSRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ Sbjct: 181 FSSIWVYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA+LYE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRT +E TSP DVLDG+L++FM+A LA Sbjct: 301 LRTGVESTSPGDVLDGELNEFMEAALA 327 >gi|220925876|ref|YP_002501178.1| hypothetical protein Mnod_6050 [Methylobacterium nodulans ORS 2060] gi|219950483|gb|ACL60875.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 375 Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust. Identities = 228/339 (67%), Positives = 275/339 (81%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DWD A +RL+ LN ++EDP LW + A+ +MRER L+ A+S I+ ++ L D L+ Sbjct: 23 LDWDTADKRLAELNARSEDPALWNDPEAAQKVMRERTQLEEAVSAIRRLEQGLEDAATLI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL E D + ++E + ++ ++ E +Q E+LL+GEAD ND YLEVHAGAGGTESQDW Sbjct: 83 ELGEMEGDEASIREGEEQIRAVQAEAARRQIETLLAGEADGNDTYLEVHAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ANML RMY RWAE+RK+K E +E +GEEAGIK ATLLIKG NAYGWLK E GVHRLVRI Sbjct: 143 ANMLHRMYARWAERRKYKVEIVEWSEGEEAGIKGATLLIKGHNAYGWLKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDSN+RRHTSF+S+WVYPV+DD I IE+ ESDCRIDTYR+SGAGGQHVNTTDSAVRIT Sbjct: 203 SPYDSNARRHTSFASVWVYPVIDDRITIEVKESDCRIDTYRSSGAGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE AN +SKT+IGWG QIR Sbjct: 263 HIPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKANAEAASKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQ+VKDLRT + TSP DVLDG++D F++A+LA Sbjct: 323 SYVLQPYQLVKDLRTGAQSTSPGDVLDGEIDPFIEASLA 361 >gi|218461792|ref|ZP_03501883.1| peptide chain release factor 2 [Rhizobium etli Kim 5] Length = 320 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 227/307 (73%), Positives = 270/307 (87%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S+++E D L+ +K E +Q E Sbjct: 1 MRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGI Sbjct: 61 AMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E Sbjct: 121 KSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDGDL++ Sbjct: 241 EAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|150396182|ref|YP_001326649.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419] gi|150027697|gb|ABR59814.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419] Length = 342 Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust. Identities = 231/327 (70%), Positives = 279/327 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP LW + EA+ LMRERQ LD+ IS ++ + +L DN+ L+EL EE D +I+ Sbjct: 1 MNNKAEDPSLWNDAAEAQKLMRERQQLDDGISGLRRFEQQLNDNIELIELGEEEGDSAIV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L++++ + KQ E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 SEAEEALRQLRNDAAKKQVEAMLSGEADQNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVD+SI+++I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ Sbjct: 181 FSSIWVYPVVDESIQVDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA+LYE EL+KREE AN +SKTEIGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTEIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRT +E TSP DVLDG+L +FM+A LA Sbjct: 301 LRTGVESTSPGDVLDGELSEFMEAALA 327 >gi|148560211|ref|YP_001258893.1| peptide chain release factor 2 [Brucella ovis ATCC 25840] gi|256369345|ref|YP_003106853.1| peptide chain release factor 2 [Brucella microti CCM 4915] gi|148371468|gb|ABQ61447.1| peptide chain release factor 2 [Brucella ovis ATCC 25840] gi|255999505|gb|ACU47904.1| peptide chain release factor 2 [Brucella microti CCM 4915] Length = 375 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 221/351 (62%), Positives = 285/351 (81%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + ++ L DWD AV+RL +LN + EDP LW + EA+ LMRERQ L+++I+ I Sbjct: 11 EIQQAISLLRRHLDWDQAVKRLGYLNQRAEDPTLWNDAQEAQKLMRERQQLEDSINGINH 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D++ L+ + EE D SI+++ ++ +K E++ +Q + LLSGEAD+ND YLEV Sbjct: 71 LKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGIKSAT+L+KG N+YG L Sbjct: 131 HAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGML 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE + + Sbjct: 251 HVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + FM+A LA Sbjct: 311 TKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALA 361 >gi|15965084|ref|NP_385437.1| peptide chain release factor 2 [Sinorhizobium meliloti 1021] gi|307315054|ref|ZP_07594639.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C] gi|307317885|ref|ZP_07597323.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83] gi|15074263|emb|CAC45910.1| Probable peptide chain release factor 2 (RF-2) protein [Sinorhizobium meliloti 1021] gi|306896647|gb|EFN27395.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83] gi|306898893|gb|EFN29543.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C] Length = 342 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 231/327 (70%), Positives = 280/327 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP LW + EA+ LMRERQ LD+ I+ ++ + +L DN+ L+EL EE D +I+ Sbjct: 1 MNNKAEDPSLWNDAAEAQKLMRERQQLDDGINGLRRFEQQLNDNIELIELGEEEGDSAIV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L++++ E KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 AEAEEALRQLRGEAAKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVD+SI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ Sbjct: 181 FSSIWVYPVVDESIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA+LYE EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRT +E +SP DVLDG+L++FM+A LA Sbjct: 301 LRTGVESSSPGDVLDGELNEFMEAALA 327 >gi|190891331|ref|YP_001977873.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT 652] gi|190696610|gb|ACE90695.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT 652] Length = 342 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 235/327 (71%), Positives = 280/327 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP+LW + EA+ LMRERQ LD+ I+ +++++ +L DN+ L+EL EE D ++ Sbjct: 1 MNNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVRQLEQQLKDNVELIELGEEEGDGGVV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KEAEDALKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQ Sbjct: 181 FSSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW MLRA++YE EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWEMLRARMYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRT + T+P DVLDGDL++FM+A LA Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALA 327 >gi|163759373|ref|ZP_02166459.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43] gi|162283777|gb|EDQ34062.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43] Length = 321 Score = 478 bits (1231), Expect = e-133, Method: Compositional matrix adjust. Identities = 226/307 (73%), Positives = 262/307 (85%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ +K + +L DNL L+E+ EE D I++E L+ ++ +V +Q E Sbjct: 1 MRERQQLEDSINGLKRTEAQLSDNLELIEMGEEEGDSDIVREAEAALKELRADVTKQQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+ K E LEIHDGEEAGI Sbjct: 61 SLLSGEADANDTYLEVHSGAGGTESQDWANMLLRMYTRWAERSGMKVELLEIHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSFSSIW YPV+DDSI+++I+E Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSQARRHTSFSSIWTYPVIDDSIDVDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 S+CRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y Sbjct: 181 SECRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARIY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKTEIGWG QIRSYVLQPYQ+VKDLRT E TSP DVLDG LD Sbjct: 241 EAELKKREEAANDEAASKTEIGWGHQIRSYVLQPYQLVKDLRTGTESTSPQDVLDGKLDP 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|13470493|ref|NP_102062.1| peptide chain release factor 2 [Mesorhizobium loti MAFF303099] gi|14021235|dbj|BAB47848.1| translation releasing factor RF-2 [Mesorhizobium loti MAFF303099] Length = 340 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 224/324 (69%), Positives = 272/324 (83%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED LW +EA+ LMRERQ L+ I+ +K + L DN+ L+EL EE D ++ E Sbjct: 2 RAEDASLWNEPLEAQKLMRERQGLEEGIAAVKGLTQALEDNIGLIELGEEEGDEGVITEA 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ ++ E + +Q E+LLSGEAD+ND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+R Sbjct: 62 EAAIRSMQGEAKARQVETLLSGEADANDTYLEIHAGAGGTESQDWASMLLRMYTRWAERR 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +FK E LE+HDGEEAGIKSATL+IKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S Sbjct: 122 RFKVEVLEVHDGEEAGIKSATLMIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFAS 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +WVYPV+DD+IEI++SESD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERS Sbjct: 182 VWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+A+AW MLR++LYE EL+KRE IAN E+SK++IGWG QIRSYVLQPYQ+VKDLRT Sbjct: 242 QHKNRAKAWEMLRSRLYEEELKKREAIANATEASKSDIGWGHQIRSYVLQPYQLVKDLRT 301 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E TSPS VLDGDLDDFM+A+L+ Sbjct: 302 GVESTSPSSVLDGDLDDFMEASLS 325 >gi|110634059|ref|YP_674267.1| peptide chain release factor 2 [Mesorhizobium sp. BNC1] gi|110285043|gb|ABG63102.1| bacterial peptide chain release factor 2 (bRF-2) [Chelativorans sp. BNC1] Length = 322 Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust. Identities = 220/307 (71%), Positives = 259/307 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+ I+ I + L DN+ L++L EE D I++E ++ ++ E+ +Q E Sbjct: 1 MRERQSLEENINAINGLSRSLDDNVELIKLGEEEGDAGIVEEAESAIRSLRGEISARQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD+ND YLEVHAGAGGTESQDWA MLLRMYTRWAE+R K E LE+HDGEEAGI Sbjct: 61 TLLSGEADANDTYLEVHAGAGGTESQDWALMLLRMYTRWAERRGMKVETLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+ G NAYGWLK E GVHRLVRISP+DSN+RRHTSF+SIWVYPV+DDSIEIEI E Sbjct: 121 KSATILVHGHNAYGWLKTESGVHRLVRISPFDSNARRHTSFASIWVYPVIDDSIEIEIPE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 S+ RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQERSQHKN+A+AW MLRA+LY Sbjct: 181 SEVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWEMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KREE AN E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E SP DVLDGDLD+ Sbjct: 241 ELELKKREEAANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESPSPQDVLDGDLDE 300 Query: 346 FMKATLA 352 FMKA+L+ Sbjct: 301 FMKASLS 307 >gi|121602405|ref|YP_989094.1| peptide chain release factor 2 [Bartonella bacilliformis KC583] gi|120614582|gb|ABM45183.1| peptide chain release factor 2 [Bartonella bacilliformis KC583] Length = 376 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 227/351 (64%), Positives = 282/351 (80%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L DWD +++RL +LN K EDP LW N +A+ +MRERQ L+++I+ I+ Sbjct: 11 EIQQALQLLRRHLDWDQSLKRLEYLNQKAEDPSLWDNAQQAQDMMRERQSLEDSINSIEL 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +L +++ L+ + EE D ++ + + ++ +K E++ +Q + LLSGEADSND YLE+ Sbjct: 71 FTQKLEESIELIAMGEEERDVDVIADAENTIRELKNEIDKRQIDILLSGEADSNDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA MLLRMY RW E+ K K E LEI+DGEEAGIKSAT+LIKG NAYG + Sbjct: 131 HAGAGGTESQDWAAMLLRMYIRWVEQHKMKVEVLEINDGEEAGIKSATILIKGHNAYGMI 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I++++SESD RIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDNIKVDVSESDVRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE N E+ Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAVEA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P VL+GDLD F++A LA Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGDLDRFIEAALA 361 >gi|240850608|ref|YP_002972008.1| peptide chain release factor 2 [Bartonella grahamii as4aup] gi|240267731|gb|ACS51319.1| peptide chain release factor 2 [Bartonella grahamii as4aup] Length = 375 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 226/351 (64%), Positives = 282/351 (80%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L G DWD +++RL +LN K EDP LW + +A+ +MRERQ LD++I+ + Sbjct: 11 EIQKAIQLLRGHLDWDQSLKRLEYLNQKAEDPSLWDDAQQAQDMMRERQRLDDSINGLLS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 L + + L+ + EE D I+ + ++++ +K E++ +Q + LLSGEAD ND YLEV Sbjct: 71 FTKTLEECIELIAMGEEESDVEIIADAENSIRNLKNEIDKRQIDVLLSGEADPNDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGIKSAT+L+KG NAYG L Sbjct: 131 HAGAGGTESQDWASMLLRMYMRWAEQHEMKVEILEIHDGEEAGIKSATILVKGHNAYGML 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE+D RIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSEADVRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE N ES Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAAES 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P VL+G+LD F++A LA Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDAFIEAALA 361 >gi|260460705|ref|ZP_05808955.1| peptide chain release factor 2 [Mesorhizobium opportunistum WSM2075] gi|259033282|gb|EEW34543.1| peptide chain release factor 2 [Mesorhizobium opportunistum WSM2075] Length = 322 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 220/307 (71%), Positives = 262/307 (85%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+ I+ +K + L DN+ L+EL EE D ++ E L+ ++ E + +Q E Sbjct: 1 MRERQGLEEGIASVKGLTQALEDNIGLIELGEEEGDEGVIAEAEAALRSMQGEAKARQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+R+FK E LE+HDGEEAGI Sbjct: 61 TLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD+IEI++SE Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDTIEIDVSE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERSQHKNKA+AW MLR++LY Sbjct: 181 SDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERSQHKNKAKAWEMLRSRLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE +AN E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E TSPS VLDGDLDD Sbjct: 241 EEELKKREAVANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDD 300 Query: 346 FMKATLA 352 FM+A+L+ Sbjct: 301 FMEASLS 307 >gi|217976907|ref|YP_002361054.1| hypothetical protein Msil_0721 [Methylocella silvestris BL2] gi|217502283|gb|ACK49692.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 376 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 215/339 (63%), Positives = 263/339 (77%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D A +RL+ LN K EDP+LW + A+ +MRER L++ + + L D + L+ Sbjct: 23 LDVATAERRLAELNAKVEDPNLWDDADAAQKIMRERTDLEDRLGSLARFDSELDDAVTLV 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA E+D + +E L+ +KLE E +Q E+LLSGE D ND Y+EVH+GAGGTES DW Sbjct: 83 ELAEAEEDTATEKEAIGQLKSLKLEAERRQIEALLSGEVDGNDTYIEVHSGAGGTESCDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY RWAE+ KFK E +E G+EAG+KS TLL+KG NA+GW K E GVHRLVRI Sbjct: 143 ARMLFRMYARWAERHKFKVEVIEETAGDEAGLKSGTLLVKGHNAHGWAKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RRHTSF+S+WVYPV+DD I+I++ ESDCRIDTYR+SGAGGQHVNTTDSAVRIT Sbjct: 203 SPFDSNARRHTSFASVWVYPVIDDKIDIDVKESDCRIDTYRSSGAGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE E++KRE AN E+SKTEIGWG QIR Sbjct: 263 HIPSGIVVACQGERSQHKNRATAWNMLRARLYEQEIEKREAAANATEASKTEIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQ+VKDLR+ + +P DVLDGDLD FM+A LA Sbjct: 323 SYVLQPYQLVKDLRSGVTSGTPDDVLDGDLDSFMEAALA 361 >gi|312115773|ref|YP_004013369.1| peptide chain release factor 2 [Rhodomicrobium vannielii ATCC 17100] gi|311220902|gb|ADP72270.1| Peptide chain release factor 2 [Rhodomicrobium vannielii ATCC 17100] Length = 376 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 225/351 (64%), Positives = 277/351 (78%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L+ L DWD A RL+ LN EDP LW N A+ L+RERQHLD A++ + Sbjct: 11 EIKQSLSLLRRYLDWDKAKIRLANLNEIVEDPTLWDNPQRAQKLLRERQHLDTALTAYSQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + RL D + L+EL EE D +++E +L ++ EV+ ++ E+LLSGEAD ND +LEV Sbjct: 71 LAARLDDAVGLIELGEEESDEEVVKEAEASLAVLQTEVQKREVEALLSGEADGNDTFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDW MLLRMY RWAE++ +K E +E GEEAG+KSAT+ +KG NA+GWL Sbjct: 131 HAGAGGTESQDWTEMLLRMYMRWAEEQGYKVELIESAAGEEAGLKSATIQVKGSNAFGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I+I ++ESDCRIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDTIDIAVNESDCRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VVQCQ ERSQHKN+A AWNML+A+LYE EL+KRE+ A+ + Sbjct: 251 HVNTTDSAVRITHVPTGIVVQCQMERSQHKNRATAWNMLKARLYEQELKKREDAAHAAAA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SKT+IGWG QIRSYVLQPYQMVKDLRT I T+P VLDGDL F++A LA Sbjct: 311 SKTDIGWGHQIRSYVLQPYQMVKDLRTGIVNTNPPAVLDGDLTAFIEAALA 361 >gi|163852399|ref|YP_001640442.1| peptide chain release factor 2 [Methylobacterium extorquens PA1] gi|218531158|ref|YP_002421974.1| peptide chain release factor 2 [Methylobacterium chloromethanicum CM4] gi|240139734|ref|YP_002964211.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1] gi|254562146|ref|YP_003069241.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4] gi|163664004|gb|ABY31371.1| peptide chain release factor 2 [Methylobacterium extorquens PA1] gi|218523461|gb|ACK84046.1| peptide chain release factor 2 [Methylobacterium chloromethanicum CM4] gi|240009708|gb|ACS40934.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1] gi|254269424|emb|CAX25390.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4] Length = 321 Score = 461 bits (1187), Expect = e-128, Method: Compositional matrix adjust. Identities = 220/307 (71%), Positives = 252/307 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD A++ IK+++ L D L+EL E D + + E ++ ++ E +Q E Sbjct: 1 MRERQELDEAVTAIKKLERDLEDGATLIELGEMEGDQASISEGEATIKAVEKEAASRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI Sbjct: 61 TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD IEIEI E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRIEIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T P +VLDGDLD Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300 Query: 346 FMKATLA 352 FM+A+LA Sbjct: 301 FMEASLA 307 >gi|188582408|ref|YP_001925853.1| peptide chain release factor 2 [Methylobacterium populi BJ001] gi|179345906|gb|ACB81318.1| peptide chain release factor 2 [Methylobacterium populi BJ001] Length = 321 Score = 461 bits (1187), Expect = e-128, Method: Compositional matrix adjust. Identities = 219/307 (71%), Positives = 253/307 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD A++ IK+++ L D L+EL E D + + E + ++ ++ E +Q E Sbjct: 1 MRERQELDEAVTAIKKLEQDLEDAATLIELGEMEGDQASITEGENAIKAVEKEAASRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI Sbjct: 61 TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T P +VLDGDLD Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300 Query: 346 FMKATLA 352 FM+A+LA Sbjct: 301 FMEASLA 307 >gi|254469263|ref|ZP_05082668.1| peptide chain release factor 2 [Pseudovibrio sp. JE062] gi|211961098|gb|EEA96293.1| peptide chain release factor 2 [Pseudovibrio sp. JE062] Length = 322 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 215/307 (70%), Positives = 259/307 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD++I+ +++++ L DN L+E+ EDD S++ E L+ + +V Q + Sbjct: 1 MRERQQLDDSINGVRKLEQDLVDNQELIEMGEMEDDQSVVDEAEGALKAMLEQVNKLQLQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND Y+E+++GAGGTESQDWA+MLLRMY RW E+ +K E +E +DGEEAGI Sbjct: 61 SLLSGEADGNDTYIEINSGAGGTESQDWASMLLRMYRRWGEQHGYKVELMEYNDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLL+KG NAYGW+K E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DDSI IEI+E Sbjct: 121 KSATLLVKGENAYGWMKTEAGVHRLVRISPYDSNARRHTSFASVWVYPVIDDSINIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +DCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+MLRA+LY Sbjct: 181 ADCRIDTYRASGAGGQHVNTTDSAVRITHNPTGIVVQCQSERSQHKNRATAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ+REE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E T+PSDVLDGDLD Sbjct: 241 EAELQRREEQANKDAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTAPSDVLDGDLDK 300 Query: 346 FMKATLA 352 FM+ATLA Sbjct: 301 FMEATLA 307 >gi|182677929|ref|YP_001832075.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica ATCC 9039] gi|182633812|gb|ACB94586.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica ATCC 9039] Length = 376 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 220/352 (62%), Positives = 269/352 (76%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D D + +RL LN K E+P LW + A+ +MRER L+ + IK+ Sbjct: 12 IKQSLGLLRRHLDVDTSTRRLEELNAKVENPDLWNDAEAAQKIMRERTELEERLGSIKQF 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L+ELA E D + +E D L+ +K+E E +Q E+LLSGE DSND Y+EVH Sbjct: 72 EGDLDDAATLIELAEAEGDEASEKEGIDLLKGLKIEAERRQIEALLSGEVDSNDTYIEVH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA ML RMY RWAE+ +FK E +E G+EAGIKSATLL+KG NA+GW K Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHRFKVEIIEETAGDEAGIKSATLLVKGHNAHGWAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+WVYPV+DD IEI++ ESDCRIDTYR+SGAGGQH Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVIDDKIEIDVKESDCRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE EL++RE AN E++ Sbjct: 252 INTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEKELERREAEANATEAT 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYVLQPYQ+VKDLRT +P +VLDGDLD FM+A LA K Sbjct: 312 KTEIGWGHQIRSYVLQPYQLVKDLRTGTTSGTPDEVLDGDLDTFMEAALAQK 363 >gi|254500720|ref|ZP_05112871.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11] gi|222436791|gb|EEE43470.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11] Length = 322 Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust. Identities = 222/307 (72%), Positives = 259/307 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD+ I+ +K ++ L DN+ L+EL EDD S++++ + L+ +K +V Q + Sbjct: 1 MRERQQLDDGINGVKGLEQELADNIELIELGEMEDDKSVVEDAEEALRGLKDKVNQLQLD 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR +K E LE HDGEEAGI Sbjct: 61 SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEYHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEI+++E Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIDVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW ML+A+LY Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWGMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT ++ TSP DVLDG LD Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVQSTSPDDVLDGSLDS 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|328543671|ref|YP_004303780.1| peptide chain release factor 2 [polymorphum gilvum SL003B-26A1] gi|326413415|gb|ADZ70478.1| Peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1] Length = 323 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 224/307 (72%), Positives = 256/307 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD I+ ++ ++ L DN+ L+EL E D S++ E + L+ +K EV Q Sbjct: 1 MRERQQLDEGITGVRRLESELSDNIELIELGDLEGDKSVVNEAEEALRGLKDEVLKLQMA 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLE++AGAGGTESQDWA+MLLRMY RWAEKR +K E LE+HDGEEAGI Sbjct: 61 SLLSGEADGNDTYLEINAGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSF+S WVYPVVDDSIEI+I+E Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSQARRHTSFASAWVYPVVDDSIEIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQ ERSQHKN+A AW ML+A++Y Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQSERSQHKNRATAWAMLKARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKREE A+ +SKT IGWG QIRSYVLQPYQMVKDLRT +E +SP DVL+GDLD Sbjct: 241 EAELQKREEAASAEAASKTSIGWGHQIRSYVLQPYQMVKDLRTGVESSSPDDVLNGDLDP 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|307941920|ref|ZP_07657273.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4] gi|307774826|gb|EFO34034.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4] Length = 322 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 223/307 (72%), Positives = 258/307 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD+ I+ +K ++ L DN+ L+EL E D S++++ D L+ +K +V Q + Sbjct: 1 MRERQQLDDGINGVKGLEQDLADNMELIELGELEGDQSVIKDAEDALRGLKDKVNELQLQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR FK E LE HDGEEAGI Sbjct: 61 SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGFKVELLEYHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGW+K E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEIE++E Sbjct: 121 KSATLLIKGENAYGWMKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIEVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN + KT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDG LD Sbjct: 241 EQELKKREEAANAEAAGKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGALDP 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|332185456|ref|ZP_08387204.1| peptide chain release factor 2 [Sphingomonas sp. S17] gi|332014434|gb|EGI56491.1| peptide chain release factor 2 [Sphingomonas sp. S17] Length = 375 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 215/346 (62%), Positives = 271/346 (78%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L DWD A++RL LN + ED LW + +A+ +MRER+ LD AI+ + I++ L Sbjct: 16 LALLRRFLDWDRALRRLDELNARVEDQALWNDPKQAQAVMRERRRLDEAITATRAIENEL 75 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + L+ELA E D + +E +L + E + ++LL+GEAD+ND+Y+E++AGAG Sbjct: 76 SGTVELIELAEMEGDEELEKEAVTSLGDLAKRAEADKVKALLAGEADANDSYIEINAGAG 135 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA ML RMYTRWAE+R K E ++ H GE+AGIKSATLL+KG NAYG+ K E G Sbjct: 136 GTESQDWAGMLQRMYTRWAERRGMKVELIDYHAGEQAGIKSATLLVKGENAYGYAKVESG 195 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISPYDS +RRHTSFSS+WVYPV+DD+IE+EI+ES+ RIDTYRASGAGGQH+NTT Sbjct: 196 VHRLVRISPYDSAARRHTSFSSVWVYPVIDDNIEVEINESELRIDTYRASGAGGQHINTT 255 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VVQCQ +RSQHKNKA+A+N LRA+LYE EL +RE +AN ++KT+I Sbjct: 256 DSAVRITHLPTGIVVQCQNQRSQHKNKAEAYNQLRARLYERELAEREAVANAENATKTDI 315 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVLQPYQ+VKDLRT + T+P DVLDGDLD FM A L+ Sbjct: 316 GWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGDLDAFMAAALS 361 >gi|319407240|emb|CBI80879.1| peptide chain release factor RF-2 [Bartonella sp. 1-1C] Length = 333 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 216/318 (67%), Positives = 263/318 (82%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 LW + +A+ +MRERQ+L+++++ + L + + L+ + EE+D I+ E + +++ Sbjct: 2 LWNDARKAQDMMRERQNLEDSMNSTQLFTQTLEECIELIAMGEEENDVEIITEAENTIRQ 61 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +K E++ KQ +LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E Sbjct: 62 LKSEIDKKQIATLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPV 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VD++IEI++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI T +VVQCQ ERSQHKNKA Sbjct: 182 VDENIEIDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTDIVVQCQTERSQHKNKA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 AW+MLRA+LYE EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T Sbjct: 242 TAWSMLRARLYEEELKKREEATNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301 Query: 335 PSDVLDGDLDDFMKATLA 352 P VL+GDLD F++A LA Sbjct: 302 PQTVLNGDLDTFIEAALA 319 >gi|86357282|ref|YP_469174.1| peptide chain release factor 2 [Rhizobium etli CFN 42] gi|86281384|gb|ABC90447.1| peptide chain release factor 2 protein [Rhizobium etli CFN 42] Length = 322 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 225/307 (73%), Positives = 267/307 (86%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD+ ++ +++++ +L DN+ L+EL EE D I++E D L+ +K E +Q E Sbjct: 1 MRERQQLDDGVNGVRQLEQQLKDNVELVELGEEEGDEGIVKEAEDALKALKAEAARRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGI Sbjct: 61 AMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI I+I+E Sbjct: 121 KSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSINIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQERSQHKN+A+AW MLRA++Y Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWEMLRARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDGDL++ Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|319404230|emb|CBI77823.1| peptide chain release factor RF-2 [Bartonella rochalimae ATCC BAA-1498] Length = 317 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 214/308 (69%), Positives = 257/308 (83%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +MRERQ+L+++++ + L + + L+ + EE+D I+ E + ++++K E++ KQ Sbjct: 1 MMRERQNLEDSMNSTQLFTQMLEECIELIAMGEEENDVEIITEAENTIRQLKSEIDKKQI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 E+LLSGEADSND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K K E LE HDGEEAG Sbjct: 61 ETLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEILETHDGEEAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPVVD++IE+++S Sbjct: 121 IKSATILVKGYNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVVDENIEVDLS 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ESD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKNKA AW+MLRA+L Sbjct: 181 ESDVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNKATAWSMLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE EL+KREE N E+ KTEIGWG QIRSYVLQPYQ+VKDLRT +E P VL+GDLD Sbjct: 241 YEEELKKREEATNAVEAFKTEIGWGHQIRSYVLQPYQLVKDLRTGVENADPQTVLNGDLD 300 Query: 345 DFMKATLA 352 F++A LA Sbjct: 301 TFIEAALA 308 >gi|170743911|ref|YP_001772566.1| peptide chain release factor 2 [Methylobacterium sp. 4-46] gi|168198185|gb|ACA20132.1| peptide chain release factor 2 [Methylobacterium sp. 4-46] Length = 321 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 212/307 (69%), Positives = 254/307 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MR+R L+ A++ I+ ++ L D L+EL E D + ++E + ++ ++ E +Q E Sbjct: 1 MRDRNDLEEAVASIRRLEQGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LL+GEAD ND YLEVHAGAGGTESQDWANML RMY RWAE+RK+K + +E +GEEAGI Sbjct: 61 TLLAGEADGNDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVDIVEWSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD I IE+ E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRITIEVKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDGD+D Sbjct: 241 ELELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTSPDDVLDGDIDP 300 Query: 346 FMKATLA 352 F++A+LA Sbjct: 301 FIEASLA 307 >gi|46201582|ref|ZP_00208157.1| COG1186: Protein chain release factor B [Magnetospirillum magnetotacticum MS-1] Length = 371 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 215/341 (63%), Positives = 261/341 (76%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 +WD A+ RL LN E+P LW + A+ +MRER LD+AI + ++ L D + L+ Sbjct: 23 LNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNDLDSAIQGCRALERELADLIELI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL E D +++ + + ++ +K + E+LLSGEAD ND Y+E++AGAGGTESQDW Sbjct: 83 ELGEMEGDQTVIDDAEEQIRAVKERAAKMELETLLSGEADHNDCYMEINAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTRWAEK +K E LE GE+AGIKSAT+ I G NAYGWLK E GVHRLVRI Sbjct: 143 AEMLLRMYTRWAEKHGYKVEWLEESSGEQAGIKSATIRILGHNAYGWLKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDS +RRHTSFSS WVYPV+DDSI+I+I+ES+CRIDTYRASGAGGQH+N TDSAVRIT Sbjct: 203 SPYDSAARRHTSFSSAWVYPVIDDSIDIQINESECRIDTYRASGAGGQHINKTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE A E KT+IGWG QIR Sbjct: 263 HIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 323 SYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363 >gi|103488652|ref|YP_618213.1| peptide chain release factor 2 [Sphingopyxis alaskensis RB2256] gi|98978729|gb|ABF54880.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingopyxis alaskensis RB2256] Length = 375 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 222/353 (62%), Positives = 265/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++ L L DWD AV+RL LN K EDP LW N A+ +MRER+ LD AI+ + Sbjct: 11 KITAALALLRRFLDWDRAVRRLDELNAKVEDPTLWDNPKAAQDVMRERRRLDEAITATRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D L+ELA E D +++ E +L + E + ++LL+GEAD NDAY+EV Sbjct: 71 IERECADTAELIELAEMEGDEAMVDEAVASLAALAARAEEDKVKALLAGEADGNDAYIEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAEKR K E +E GE+AGIKSAT+L+KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLQRMYMRWAEKRGMKVELIEYQAGEQAGIKSATMLVKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIEI+E D +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEINEGDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV Q +RSQHKN+A A ML+A+LYE ELQKRE A+ Sbjct: 251 HVNTTDSAVRITHIPTGIVVASQNDRSQHKNRATAMGMLKARLYEAELQKREAAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDG LD FM A L+ K Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGALDPFMAAALSQK 363 >gi|90417703|ref|ZP_01225615.1| peptide chain release factor 2 [Aurantimonas manganoxydans SI85-9A1] gi|90337375|gb|EAS51026.1| peptide chain release factor 2 [Aurantimonas manganoxydans SI85-9A1] Length = 321 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 218/307 (71%), Positives = 250/307 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD AI + + L DN+ L+ + EE D I++E ++ IK E + +Q E Sbjct: 1 MRERQFLDTAIGAVNRLNQSLQDNIELIAMGEEEKDAEIVKEAEAAIREIKSEADKRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEADSND Y+EVH+GAGGTESQDWA ML RMY RWAE+ KFK E LE H GEEAGI Sbjct: 61 TLLSGEADSNDTYVEVHSGAGGTESQDWAAMLQRMYMRWAERAKFKVEVLEEHSGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGW+K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDDSI+I+++E Sbjct: 121 KSATLLIKGHNAYGWMKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDSIDIDVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RIDTYRASGAGGQHVNTTDSAVRITH+ TG+VVQCQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHLETGIVVQCQAERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL++RE AN +SKT+IGWG QIRSYVLQPYQMVKDLRT IE TSP DVLDG LD Sbjct: 241 EAELERRENAANAEAASKTDIGWGHQIRSYVLQPYQMVKDLRTGIESTSPQDVLDGGLDP 300 Query: 346 FMKATLA 352 FM+ LA Sbjct: 301 FMEGALA 307 >gi|83311912|ref|YP_422176.1| peptide chain release factor 2 [Magnetospirillum magneticum AMB-1] gi|123541518|sp|Q2W3F8|RF2_MAGMM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|82946753|dbj|BAE51617.1| Protein chain release factor B [Magnetospirillum magneticum AMB-1] Length = 371 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 214/341 (62%), Positives = 260/341 (76%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 +WD A+ RL LN E+P LW + A+ +MRER LD+AI + ++ L D L+ Sbjct: 23 LNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNELDSAIQGCRALERELADLAELI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL E D +++ + + ++ +K + E+LLSGEAD ND Y+E++AGAGGTESQDW Sbjct: 83 ELGEMEGDQTVIDDAEEQVRALKERAAKMELETLLSGEADHNDCYMEINAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTRWAEK +K E LE GE+AGIKSAT+ I G NAYGWLK E GVHRLVRI Sbjct: 143 AEMLLRMYTRWAEKHGYKVEWLEESAGEQAGIKSATIRILGHNAYGWLKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDS +RRHTSFSS WVYPV+DD+I+I+I+ES+CRIDTYRASGAGGQH+N TDSAVRIT Sbjct: 203 SPYDSAARRHTSFSSAWVYPVIDDTIDIQINESECRIDTYRASGAGGQHINKTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE A E KT+IGWG QIR Sbjct: 263 HIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 323 SYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363 >gi|114704660|ref|ZP_01437568.1| peptide chain release factor 2 protein [Fulvimarina pelagi HTCC2506] gi|114539445|gb|EAU42565.1| peptide chain release factor 2 protein [Fulvimarina pelagi HTCC2506] Length = 321 Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust. Identities = 213/307 (69%), Positives = 252/307 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQHL+ I+ I+E++ + +N+ L+ + EE D I+ E L+ ++ + +Q E Sbjct: 1 MRERQHLETNITAIRELESAVEENVELIAMGEEEGDGEIVSEAEATLKTLQTDAAKRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEADSND Y+EVH+GAGGTESQDWA+ML RMY RWAE+ FK E LE GEEAGI Sbjct: 61 TLLSGEADSNDTYMEVHSGAGGTESQDWASMLQRMYIRWAERANFKVEVLEEQGGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS TLLIKG NAYGW K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDD+I+IE++E Sbjct: 121 KSTTLLIKGHNAYGWAKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDTIDIEVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VV CQQERSQHKN+A AWNML+A+LY Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVACQQERSQHKNRATAWNMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT IE TSP DVLDG+LD+ Sbjct: 241 EAELEKREAEANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGIESTSPQDVLDGELDE 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|118590063|ref|ZP_01547467.1| peptide chain release factor 2 [Stappia aggregata IAM 12614] gi|118437560|gb|EAV44197.1| peptide chain release factor 2 [Stappia aggregata IAM 12614] Length = 322 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 225/307 (73%), Positives = 261/307 (85%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD++IS IK ++ L DN+ L+EL EDD S++ + + L+ +K +V Q Sbjct: 1 MRERQQLDDSISGIKSLEQDLSDNIELIELGEMEDDKSVVADAEEALRGLKGKVNQLQLN 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND YLE+++GAGGTESQDWA+MLLRMY RWAEK FK E LE HDGEEAGI Sbjct: 61 SLLSGEADANDTYLEINSGAGGTESQDWASMLLRMYRRWAEKHGFKVEVLEYHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSI+I+I+E Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIDIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE A+ +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDGDLD+ Sbjct: 241 EAELKKREEAASAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGDLDE 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|170751458|ref|YP_001757718.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM 2831] gi|170657980|gb|ACB27035.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM 2831] Length = 321 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 218/307 (71%), Positives = 253/307 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD A++ IK+++ L D L+EL E D S ++E + ++ E +Q E Sbjct: 1 MRERQQLDEAVTAIKKLERDLEDGATLIELGEMEGDESSIREGEAAILAVEKEAASRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWANML RMY RWAE+RK+K E +E+ DGEEAGI Sbjct: 61 TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVEVVEMTDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD IEIEI E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSSARRHTSFASVWVYPVIDDRIEIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KREE AN ++KT+IGWG QIRSYVLQPYQ+VKDLRT + T P +VLDGDLD Sbjct: 241 ELELKKREEKANAEAAAKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300 Query: 346 FMKATLA 352 FM+A+LA Sbjct: 301 FMEASLA 307 >gi|49474202|ref|YP_032244.1| peptide chain release factor 2 [Bartonella quintana str. Toulouse] gi|49239706|emb|CAF26082.1| Peptide chain release factor 2 (rf-2 [Bartonella quintana str. Toulouse] Length = 322 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 211/308 (68%), Positives = 253/308 (82%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +MRERQ LD++IS I+ L + + L+ + EE D I+ + + ++ +K E++ +Q Sbjct: 1 MMRERQRLDDSISGIQSFTKTLEECIELIAMGEEESDVEIITDAENLIRNLKNEIDKRQI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + LLS EAD ND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAG Sbjct: 61 DMLLSREADPNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ +KG NAYG LK E GVHRLVRISPYDSN++RHTSF+SIWVYPV+DD+IE+++S Sbjct: 121 IKSATIFVKGHNAYGLLKTESGVHRLVRISPYDSNAKRHTSFASIWVYPVIDDNIEVDVS 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ESD RIDTYR+SGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+L Sbjct: 181 ESDVRIDTYRSSGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE EL+KREE N ESSKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P VL+G+LD Sbjct: 241 YEQELKKREEKTNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLD 300 Query: 345 DFMKATLA 352 F++A LA Sbjct: 301 AFIEAALA 308 >gi|144897340|emb|CAM74204.1| peptide chain release factor 2 [Magnetospirillum gryphiswaldense MSR-1] Length = 372 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 212/339 (62%), Positives = 263/339 (77%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 +WD+A+ RL LN + EDP+LW + +A+ LMRER LD +S ++++ L D L L+ Sbjct: 23 LNWDDALMRLDELNAQAEDPNLWNDGDKAQKLMRERTQLDTQVSGCRKLEADLDDMLGLI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA E D + + L+ +K + E+LLSGEAD+ND YLE+++GAGGTE+QDW Sbjct: 83 ELADAEGDTDVAADAEAQLRALKDLAGKLELETLLSGEADANDCYLEINSGAGGTEAQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY+RWAE+ +K E +E GE AGIKSAT+ + G NAYGWLK E GVHRLVRI Sbjct: 143 AEMLLRMYSRWAEQHGYKLEFVEESAGEGAGIKSATIRVVGHNAYGWLKTEAGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RR TSF+S WVYPVVDD+I+I+I+ESDCRIDTYRASGAGGQH+N TDSAVRIT Sbjct: 203 SPFDSNARRQTSFASAWVYPVVDDTIDIQINESDCRIDTYRASGAGGQHINKTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE A E +KT+IGWG QIR Sbjct: 263 HIPTGIAVACQTERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDTKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQM+KDLRTN+E + VLDGDLD FM A+LA Sbjct: 323 SYVLQPYQMIKDLRTNVETSDTQAVLDGDLDMFMAASLA 361 >gi|153009595|ref|YP_001370810.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188] gi|151561483|gb|ABS14981.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188] Length = 321 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 202/307 (65%), Positives = 258/307 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L D++ L+ + EEDD SI+Q+ + ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLKQTLNDSIELIAMGEEEDDKSIIQDAENTIRELKQEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND Y+EVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG +K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+I+++++E Sbjct: 121 KSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIDVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE + ++KTEIGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREAATDAANATKTEIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGSVTP 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|94495879|ref|ZP_01302458.1| protein chain release factor B [Sphingomonas sp. SKA58] gi|94424571|gb|EAT09593.1| protein chain release factor B [Sphingomonas sp. SKA58] Length = 377 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 210/353 (59%), Positives = 263/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L L DWD A++RL LN + EDP LW N +A+ +MRER LD+AI + Sbjct: 13 RIDAALALLRQSLDWDRALRRLDELNARVEDPTLWDNAKQAQEVMRERTRLDSAIGATRA 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D L+E+A E D ++ E L+ + + + ++LL+GEADS D YLE+ Sbjct: 73 IEAEKSDTAELIEMAEAEGDEGMVDEAVAALKALADRADEDKIKALLAGEADSYDTYLEI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R +K E ++ G++AGIKSAT L+KG NAYG+ Sbjct: 133 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLMKGENAYGYA 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD I+IE+ ESD +IDTYRASGAGGQ Sbjct: 193 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIDIEVKESDLKIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G++V Q +RSQHKN+A A NML+A+LYE EL++REE A+ Sbjct: 253 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASSDYQ 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG LD FM A L+ K Sbjct: 313 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 365 >gi|294010764|ref|YP_003544224.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S] gi|292674094|dbj|BAI95612.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S] Length = 375 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 210/353 (59%), Positives = 265/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L+ L DWD A++RL LN + EDP LW N +A+ +MRER LD AI + Sbjct: 11 RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQRQAQEVMRERTRLDAAIGATRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I D L+E+A E D ++ E +L+ + + + ++LL+GEAD++D YLE+ Sbjct: 71 IDSEKTDTAELIEMAEAEGDEDMVNEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R +K E ++ G++AGIKSAT L KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G++V Q +RSQHKN+A A NML+A+LYE EL++REE A+ Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG LD FM A L+ K Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363 >gi|197105302|ref|YP_002130679.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1] gi|238690157|sp|B4RCR3|RF2_PHEZH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|196478722|gb|ACG78250.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1] Length = 369 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 212/349 (60%), Positives = 257/349 (73%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S + NC GG+FDW+ A+++L LN + EDP LW + EA+ + RER L + + ++ Sbjct: 10 SSRSNCSGGVFDWEPALRKLDELNARVEDPTLWNDPDEAQAVSRERSRLSAQVEAVHGLE 69 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L ELA EE D + L E L+ IK + E+LLSGEAD NDAY+E+++ Sbjct: 70 RDLADALGYAELADEEGDEASLDEARAQLREIKERAARAELEALLSGEADGNDAYVEINS 129 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA MLLRMYTRWA+ + +E GE+AGIKS TL +KG NAYGWLK Sbjct: 130 GAGGTESNDWAGMLLRMYTRWAQAHGMSVDVIEETAGEQAGIKSVTLQVKGTNAYGWLKT 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD+IEIEI+ +D R DTYRASGAGGQHV Sbjct: 190 EAGVHRLVRISPYDSSARRHTSFASVWVYPVIDDNIEIEINPADVRTDTYRASGAGGQHV 249 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVR+THIPTG+ V CQ +RSQH+N+ QAW MLRA+LYELEL+KRE E K Sbjct: 250 NKTDSAVRLTHIPTGIAVACQTQRSQHQNRDQAWKMLRARLYELELEKREAAQQALEDQK 309 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 T+IGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM A LA Sbjct: 310 TDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALA 358 >gi|319405668|emb|CBI79291.1| peptide chain release factor RF-2 [Bartonella sp. AR 15-3] Length = 332 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 216/318 (67%), Positives = 265/318 (83%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 LW + +A+ +MRERQ+L+++++ + RL + + L+ + EE+D I+ ET + +++ Sbjct: 2 LWNDAQKAQDMMRERQNLEDSMNSTQLFAQRLEECIELIAMGEEENDVGIIAETENTIRQ 61 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +K E++ +Q E LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E Sbjct: 62 LKSEIDKRQIEMLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSNS+RHTSF+SIWVYPV Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNSKRHTSFASIWVYPV 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VD++IE+++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A Sbjct: 182 VDENIEVDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 AW+MLRA+LYE EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKD RT +E T Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDSRTGLENTD 301 Query: 335 PSDVLDGDLDDFMKATLA 352 P VL+GDLD F++A LA Sbjct: 302 PQTVLNGDLDAFIEAALA 319 >gi|316934390|ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1] gi|315602104|gb|ADU44639.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1] Length = 376 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 216/339 (63%), Positives = 267/339 (78%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D + RL+ LN EDP+LW + +A+ LM+ER L++A++ I +++ L DN+ ++ Sbjct: 23 LDVDQSTVRLAELNKLAEDPNLWNDPQKAQKLMQERTSLEDALTGIGKVERELTDNIDMI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL E D I++E + L+ +K EV ++ E+LLSGEAD D YLEVHAGAGGTESQDW Sbjct: 83 ELGEAEGDEGIVKEAEEALKALKKEVARRELEALLSGEADRFDTYLEVHAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLRMY RWAEK FK E LE DGEEAGIKSAT+ I G NAYGWLK E GVHRLVRI Sbjct: 143 ASMLLRMYVRWAEKHGFKIEYLEESDGEEAGIKSATIQISGHNAYGWLKTEAGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RRHTSFSS+ ++PV+DDSI+I+I ESD R DT R+ GAGGQHVN T+SAVR+T Sbjct: 203 SPFDSNARRHTSFSSVQIFPVIDDSIKIDIKESDVRTDTMRSGGAGGQHVNKTESAVRLT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTGV V CQ RSQHKN+AQAW+MLRA+LYE+EL+KREE A +++KTEIGWG QIR Sbjct: 263 HIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQAAKTEIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQMVKDLRT ++ + + VLDGDLD+FM ATLA Sbjct: 323 SYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLA 361 >gi|306843816|ref|ZP_07476414.1| peptide chain release factor 2 [Brucella sp. BO1] gi|306275894|gb|EFM57610.1| peptide chain release factor 2 [Brucella sp. BO1] Length = 321 Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust. Identities = 204/307 (66%), Positives = 257/307 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L DN+ L+ + EE D SI+++ ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINYLKQTLNDNVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|319408605|emb|CBI82260.1| peptide chain release factor RF-2 [Bartonella schoenbuchensis R1] Length = 323 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 211/308 (68%), Positives = 255/308 (82%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +MRERQ L+++I+ I+ L + + L+ + EE D I+ + + ++++K E++ +Q Sbjct: 1 MMRERQCLEDSINGIRLFTQTLEECIELIAMGEEESDEEIITDAENTIRKLKSEIDKRQI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAG Sbjct: 61 DLLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYIRWAEQHKMKVEVLEIHDGEEAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+L+KG NAYG LK E GVHRLVRISP+DSN+RRHTSF+S+WVY VVDD+IEI+IS Sbjct: 121 IKSATILVKGHNAYGMLKTESGVHRLVRISPFDSNARRHTSFASVWVYSVVDDNIEIDIS 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ESD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+L Sbjct: 181 ESDIRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQVERSQHKNRATAWSMLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE EL+KRE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P VL+G+LD Sbjct: 241 YEEELKKREAETNAIEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQTVLNGNLD 300 Query: 345 DFMKATLA 352 F++A LA Sbjct: 301 AFIEAALA 308 >gi|148556746|ref|YP_001264328.1| peptide chain release factor 2 [Sphingomonas wittichii RW1] gi|148501936|gb|ABQ70190.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingomonas wittichii RW1] Length = 375 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 208/351 (59%), Positives = 266/351 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++ + + DWD A++RL LN + EDP LW + A+ +MRER+ LD A+S +K Sbjct: 11 QINQAMALVRRFLDWDRALRRLDELNNRVEDPKLWDDAKAAQEVMRERRRLDEAVSAVKA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D + L+ELA EDD +++ + L + E + +LL+GEAD+N+ Y+EV Sbjct: 71 IEQERDDTIELIELAEAEDDTALVDDGVQALAALAERAEKDKIGALLAGEADANNTYIEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTESQDWA ML RMY RWAE+ +K E ++ H GE+AGIKSATLL++G NAYG+ Sbjct: 131 NSGAGGTESQDWAGMLQRMYARWAERHGYKVELIDFHAGEQAGIKSATLLVRGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS +RRHTSF+S+WVYP VDD I+IE+ E D +IDTYR+SGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSAARRHTSFASVWVYPEVDDDIDIEVLEKDLKIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG++V CQ +RSQHKN+A+A L+A+LYE ELQKRE A G + Sbjct: 251 HVNTTDSAVRITHVPTGIIVACQNQRSQHKNRAEAMKQLKARLYEQELQKREAEAMAGYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KTEIGWG QIRSYVLQPYQMVKDLRT T+PSDVLDGDLD FM A L+ Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGTTSTAPSDVLDGDLDRFMAAALS 361 >gi|17987337|ref|NP_539971.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M] gi|62289859|ref|YP_221652.1| peptide chain release factor 2 [Brucella abortus bv. 1 str. 9-941] gi|82699784|ref|YP_414358.1| peptide chain release factor 2 [Brucella melitensis biovar Abortus 2308] gi|189024100|ref|YP_001934868.1| peptide chain release factor 2 [Brucella abortus S19] gi|225627404|ref|ZP_03785441.1| peptide chain release factor 2 [Brucella ceti str. Cudo] gi|225852429|ref|YP_002732662.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457] gi|237815350|ref|ZP_04594348.1| peptide chain release factor 2 [Brucella abortus str. 2308 A] gi|254689165|ref|ZP_05152419.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870] gi|254693648|ref|ZP_05155476.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya] gi|254697300|ref|ZP_05159128.1| peptide chain release factor 2 [Brucella abortus bv. 2 str. 86/8/59] gi|254706874|ref|ZP_05168702.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10] gi|254710017|ref|ZP_05171828.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94] gi|254714019|ref|ZP_05175830.1| peptide chain release factor 2 [Brucella ceti M644/93/1] gi|254716923|ref|ZP_05178734.1| peptide chain release factor 2 [Brucella ceti M13/05/1] gi|254719019|ref|ZP_05180830.1| peptide chain release factor 2 [Brucella sp. 83/13] gi|254730198|ref|ZP_05188776.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292] gi|256031512|ref|ZP_05445126.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1] gi|256044588|ref|ZP_05447492.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. Rev.1] gi|256061021|ref|ZP_05451178.1| peptide chain release factor 2 [Brucella neotomae 5K33] gi|256113462|ref|ZP_05454303.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str. Ether] gi|256159637|ref|ZP_05457399.1| peptide chain release factor 2 [Brucella ceti M490/95/1] gi|256254917|ref|ZP_05460453.1| peptide chain release factor 2 [Brucella ceti B1/94] gi|256257415|ref|ZP_05462951.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68] gi|256264074|ref|ZP_05466606.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str. 63/9] gi|260168645|ref|ZP_05755456.1| peptide chain release factor 2 [Brucella sp. F5/99] gi|260545394|ref|ZP_05821135.1| peptide chain release factor 2 [Brucella abortus NCTC 8038] gi|260563940|ref|ZP_05834426.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M] gi|260754664|ref|ZP_05867012.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870] gi|260757887|ref|ZP_05870235.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292] gi|260761710|ref|ZP_05874053.1| peptide chain release factor 2 [Brucella abortus bv. 2 str. 86/8/59] gi|260883690|ref|ZP_05895304.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68] gi|261213915|ref|ZP_05928196.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya] gi|261218729|ref|ZP_05933010.1| peptide chain release factor 2 [Brucella ceti M13/05/1] gi|261222099|ref|ZP_05936380.1| peptide chain release factor 2 [Brucella ceti B1/94] gi|261314339|ref|ZP_05953536.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10] gi|261317565|ref|ZP_05956762.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94] gi|261321773|ref|ZP_05960970.1| peptide chain release factor 2 [Brucella ceti M644/93/1] gi|261325021|ref|ZP_05964218.1| peptide chain release factor 2 [Brucella neotomae 5K33] gi|261758119|ref|ZP_06001828.1| peptide chain release factor 2 [Brucella sp. F5/99] gi|265984009|ref|ZP_06096744.1| peptide chain release factor 2 [Brucella sp. 83/13] gi|265988599|ref|ZP_06101156.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1] gi|265991013|ref|ZP_06103570.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. Rev.1] gi|265994850|ref|ZP_06107407.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str. Ether] gi|265998064|ref|ZP_06110621.1| peptide chain release factor 2 [Brucella ceti M490/95/1] gi|294852271|ref|ZP_06792944.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026] gi|297248263|ref|ZP_06931981.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196] gi|306840093|ref|ZP_07472879.1| peptide chain release factor 2 [Brucella sp. NF 2653] gi|17983020|gb|AAL52235.1| bacterial peptide chain release factor 2 (rf-2) [Brucella melitensis bv. 1 str. 16M] gi|62195991|gb|AAX74291.1| peptide release factor 2 [Brucella abortus bv. 1 str. 9-941] gi|82615885|emb|CAJ10889.1| Class I peptide chain release factor domain:Peptide chain release factor 2:PCRF domain [Brucella melitensis biovar Abortus 2308] gi|189019672|gb|ACD72394.1| Peptide chain release factor 2 [Brucella abortus S19] gi|225617409|gb|EEH14454.1| peptide chain release factor 2 [Brucella ceti str. Cudo] gi|225640794|gb|ACO00708.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457] gi|237790187|gb|EEP64397.1| peptide chain release factor 2 [Brucella abortus str. 2308 A] gi|260096801|gb|EEW80676.1| peptide chain release factor 2 [Brucella abortus NCTC 8038] gi|260153956|gb|EEW89048.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M] gi|260668205|gb|EEX55145.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292] gi|260672142|gb|EEX58963.1| peptide chain release factor 2 [Brucella abortus bv. 2 str. 86/8/59] gi|260674772|gb|EEX61593.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870] gi|260873218|gb|EEX80287.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68] gi|260915522|gb|EEX82383.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya] gi|260920683|gb|EEX87336.1| peptide chain release factor 2 [Brucella ceti B1/94] gi|260923818|gb|EEX90386.1| peptide chain release factor 2 [Brucella ceti M13/05/1] gi|261294463|gb|EEX97959.1| peptide chain release factor 2 [Brucella ceti M644/93/1] gi|261296788|gb|EEY00285.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94] gi|261301001|gb|EEY04498.1| peptide chain release factor 2 [Brucella neotomae 5K33] gi|261303365|gb|EEY06862.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10] gi|261738103|gb|EEY26099.1| peptide chain release factor 2 [Brucella sp. F5/99] gi|262552532|gb|EEZ08522.1| peptide chain release factor 2 [Brucella ceti M490/95/1] gi|262765963|gb|EEZ11752.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str. Ether] gi|263001797|gb|EEZ14372.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. Rev.1] gi|263094278|gb|EEZ18139.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str. 63/9] gi|264660796|gb|EEZ31057.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1] gi|264662601|gb|EEZ32862.1| peptide chain release factor 2 [Brucella sp. 83/13] gi|294820860|gb|EFG37859.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026] gi|297175432|gb|EFH34779.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196] gi|306404821|gb|EFM61114.1| peptide chain release factor 2 [Brucella sp. NF 2653] gi|326408941|gb|ADZ66006.1| Peptide chain release factor 2 [Brucella melitensis M28] gi|326538654|gb|ADZ86869.1| peptide chain release factor 2 [Brucella melitensis M5-90] Length = 321 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 203/307 (66%), Positives = 257/307 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L D++ L+ + EE D SI+++ ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|161618874|ref|YP_001592761.1| peptide chain release factor 2 [Brucella canis ATCC 23365] gi|254704223|ref|ZP_05166051.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686] gi|260566529|ref|ZP_05836999.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40] gi|261754891|ref|ZP_05998600.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686] gi|161335685|gb|ABX61990.1| peptide chain release factor 2 [Brucella canis ATCC 23365] gi|260156047|gb|EEW91127.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40] gi|261744644|gb|EEY32570.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686] Length = 321 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 203/307 (66%), Positives = 257/307 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L D++ L+ + EE D SI+++ ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|304322131|ref|YP_003855774.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis HTCC2503] gi|303301033|gb|ADM10632.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis HTCC2503] Length = 315 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 208/307 (67%), Positives = 247/307 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER HL+N I+ + +Q L DNL L E+A E D + + + L +K + E Sbjct: 1 MQERTHLENQIAALTAMQTELDDNLELAEMAEAEGDDAAVDDIQAALADLKDRAGRAELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD+N+A++E+HAGAGGTES DWANML RMY RWA++ K + +E GEEAGI Sbjct: 61 ALLSGEADANNAFVEIHAGAGGTESNDWANMLYRMYVRWAQQHGHKVDIIEEQGGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+WVYP +DD+IEIE++E Sbjct: 121 KSATILVKGINAYGWLKVESGVHRLVRISPYDSNARRHTSFSSVWVYPEIDDNIEIEVAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCR+DT+RASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRVDTFRASGAGGQHVNTTDSAVRITHEPTGIVVQCQSERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ELQ+REE AN +SKT+IGWG QIRSYVLQPYQMVKDLRT +E SP VLDGDLD Sbjct: 241 EMELQRREEEANAQAASKTDIGWGHQIRSYVLQPYQMVKDLRTGVESPSPDAVLDGDLDA 300 Query: 346 FMKATLA 352 FM A LA Sbjct: 301 FMGAALA 307 >gi|85374178|ref|YP_458240.1| protein chain release factor B [Erythrobacter litoralis HTCC2594] gi|84787261|gb|ABC63443.1| protein chain release factor B [Erythrobacter litoralis HTCC2594] Length = 375 Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust. Identities = 205/339 (60%), Positives = 261/339 (76%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DW+ A++RL LN + +DP LW + EA+ + RE++ L+ A+ ++EI + D + + Sbjct: 23 LDWERALRRLDELNARVQDPDLWNDPKEAQAISREQKTLETAVKTVREIGSEMADAIEFV 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL E D +++E +LQ++ + + ++LLSGEAD ND Y+E+HAGAGGTESQDW Sbjct: 83 ELGEAEGDEDVVKEGLASLQKLADRADADKVQALLSGEADGNDTYIEIHAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAE+R FK E +E G++AGIKSATLL+KG NAYG+ K E GVHRLVRI Sbjct: 143 AEMLLRMYARWAERRGFKVETVEYQAGDQAGIKSATLLVKGENAYGYAKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDS++RRHTSFSS+WVYPV+DD+IEIEI++SD +IDTYRASGAGGQHVNTTDSAVRIT Sbjct: 203 SPYDSSARRHTSFSSVWVYPVIDDNIEIEINDSDLKIDTYRASGAGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VV Q +RSQHKN+A A NML+A+L+E E+ +RE A+ KTEIGWG QIR Sbjct: 263 HQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQEKTEIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQMVKDLRT + +SP DVLDG LD ++ A LA Sbjct: 323 SYVLQPYQMVKDLRTGVTSSSPDDVLDGALDPYISAALA 361 >gi|298291326|ref|YP_003693265.1| peptide chain release factor 2 [Starkeya novella DSM 506] gi|296927837|gb|ADH88646.1| peptide chain release factor 2 [Starkeya novella DSM 506] Length = 376 Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust. Identities = 212/339 (62%), Positives = 263/339 (77%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D + RL+ LN EDP+LW + A+ LM+ER L++ + I+ I L DN+ L+ Sbjct: 23 IDFDRSKARLAELNALAEDPNLWNDPERAQKLMQERGTLEDGLGAIERINRELADNVELI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL E D SI+ E + L R+K EV +Q E+LLSGEADSND+YLEVHAGAGGT+SQDW Sbjct: 83 ELGEAEGDDSIVDEAAAALDRLKAEVARRQLEALLSGEADSNDSYLEVHAGAGGTDSQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTRWAE+R FK E +E GE AG+KSAT+L+KG NAYGWLK E GVHRLVRI Sbjct: 143 ALMLLRMYTRWAERRGFKVELIEEQAGETAGLKSATMLVKGHNAYGWLKTEGGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RR TSF+SI VYPV+DD I ++I E+D R+DT R+ GAGGQHVN T+SAVR+T Sbjct: 203 SPFDSNARRQTSFASIDVYPVIDDRIVVDIKEADVRVDTMRSGGAGGQHVNKTESAVRLT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+ V Q +RSQHKN+A AW+MLRAKLYE+EL+KRE A +++KT+IGWG QIR Sbjct: 263 HIPTGIAVVSQGDRSQHKNRATAWDMLRAKLYEMELKKREAQAAADQAAKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQ+VKDLRT + +P +VLDGDLD FM+A LA Sbjct: 323 SYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALA 361 >gi|163843187|ref|YP_001627591.1| peptide chain release factor 2 [Brucella suis ATCC 23445] gi|163673910|gb|ABY38021.1| peptide chain release factor 2 [Brucella suis ATCC 23445] Length = 321 Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust. Identities = 203/307 (66%), Positives = 256/307 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L D++ L+ + EE D SI++ ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEGAEKTIRDLKDEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E Sbjct: 121 KSATILVKGQNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|239831796|ref|ZP_04680125.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301] gi|239824063|gb|EEQ95631.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301] Length = 321 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 200/307 (65%), Positives = 257/307 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I + L D++ L+ + EE+D SI+Q+ + ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLTQTLNDSIELIAMGEEENDKSIIQDAENTIRELKEEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND Y+EVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG +K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+I+++++E Sbjct: 121 KSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIDVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREAATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGSVTP 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMEAALA 307 >gi|307294100|ref|ZP_07573944.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1] gi|306880251|gb|EFN11468.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1] Length = 375 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 209/353 (59%), Positives = 264/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L+ L DWD A++RL LN + EDP LW N A+ +MRER L+ AI + Sbjct: 11 RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQKLAQEVMRERTRLEAAIGATRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I D L+E+A E D ++ E +L+ + + + ++LL+GEAD++D YLE+ Sbjct: 71 IDSEKTDTAELIEMADAEGDEDMVTEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R +K E ++ G++AGIKSAT L KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G++V Q +RSQHKN+A A NML+A+LYE EL++REE A+ Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG LD FM A L+ K Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363 >gi|254701680|ref|ZP_05163508.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513] gi|261752232|ref|ZP_05995941.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513] gi|261741985|gb|EEY29911.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513] Length = 321 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 202/306 (66%), Positives = 256/306 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L D++ L+ + EE D SI+++ ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300 Query: 346 FMKATL 351 FM+A L Sbjct: 301 FMEAAL 306 >gi|16126117|ref|NP_420681.1| peptide chain release factor 2 [Caulobacter crescentus CB15] gi|221234887|ref|YP_002517323.1| peptide chain release factor 2 [Caulobacter crescentus NA1000] gi|24638156|sp|Q9A752|RF2_CAUCR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790910|sp|B8GWM3|RF2_CAUCN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|13423319|gb|AAK23849.1| peptide chain release factor 2 [Caulobacter crescentus CB15] gi|220964059|gb|ACL95415.1| bacterial peptide chain Release factor 2 (RF-2) [Caulobacter crescentus NA1000] Length = 371 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 212/345 (61%), Positives = 255/345 (73%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 +C GG+FDWD A+++L LN + EDP LW EA+ + RER +L + ++ I+ L Sbjct: 14 DCSGGVFDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLK 73 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ELA E D L + L+ +K + E+LLSGEAD ND Y+E+++GAGG Sbjct: 74 DALEYAELAEMESDEDSLNDARAQLKSLKERAGRAELEALLSGEADGNDCYVEINSGAGG 133 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TES DWA +LLRMYTRWA TE +E DG++AGIKSATLL+KG NAYGWLK E GV Sbjct: 134 TESCDWAGILLRMYTRWANAHGMTTELIEETDGDQAGIKSATLLVKGANAYGWLKTEAGV 193 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIEI+ SD R DTYRASGAGGQH+N TD Sbjct: 194 HRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEINPSDVRTDTYRASGAGGQHINKTD 253 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+ V CQ RSQH+N+ +AW MLRA+LYE ELQKRE E KT+IG Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQKTDIG 313 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLA 358 >gi|296283820|ref|ZP_06861818.1| peptide chain release factor 2 [Citromicrobium bathyomarinum JL354] Length = 375 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 206/339 (60%), Positives = 258/339 (76%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DW+ A++ L LN + EDP LW + +A+ +MRE++ L++AI + I + D + + Sbjct: 23 LDWERALRELDELNARVEDPTLWDDPKQAQAIMREQKRLESAIGTVNTISSEMADAIEFV 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ E D I+ E +L+++ + + ++LLSGEAD+NDAYLEVHAGAGGTESQDW Sbjct: 83 EMGEAEGDDDIVNEGLTSLEKLAARADADKVQALLSGEADANDAYLEVHAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML+RMY RWAEKR FK E +E GE+AGIKS TL IKG NAYG+ K E GVHRLVRI Sbjct: 143 AEMLMRMYVRWAEKRGFKVETVEYQSGEQAGIKSVTLHIKGENAYGYAKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDS++RRHTSFSS+WVYPV+DD IEIEI+ESD +IDTYRASGAGGQHVNTTDSAVRIT Sbjct: 203 SPYDSSARRHTSFSSVWVYPVIDDDIEIEINESDLKIDTYRASGAGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VV Q +RSQHKN+A A +ML+A+L+E E+ +RE A+ + KTEIGWG QIR Sbjct: 263 HQPTGIVVASQNDRSQHKNRATAMSMLKARLFEREMAEREAAASGEYAEKTEIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQ+VKDLRT T+P DVLDG +D F+ A LA Sbjct: 323 SYVLQPYQLVKDLRTGETSTAPGDVLDGAIDPFISAALA 361 >gi|319898909|ref|YP_004159002.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73] gi|319402873|emb|CBI76424.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73] Length = 333 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 213/318 (66%), Positives = 262/318 (82%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 LW N +A+ +MRERQ+L+N+++ + L + + L+ + EE+D I+ E + + + Sbjct: 2 LWNNAQKAQDVMRERQNLENSMNSTQLFTQTLEECIELIAMGEEENDMGIIAEAENTILQ 61 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +K E++ ++ E LLSGEADSND YLE+HAGAGG ESQDWA+MLLRMY+RWAE+ K K E Sbjct: 62 LKKEIDKRRIEMLLSGEADSNDTYLEIHAGAGGIESQDWASMLLRMYSRWAEQNKMKVEV 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE HDGEEAGIKSATLLIKG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIW+YPV Sbjct: 122 LETHDGEEAGIKSATLLIKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWIYPV 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 V+++IE+++S++D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A Sbjct: 182 VNENIEVDLSDADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 AW+MLRA+LYE EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301 Query: 335 PSDVLDGDLDDFMKATLA 352 P VL+GDLD F++A LA Sbjct: 302 PQTVLNGDLDIFIEAALA 319 >gi|323135929|ref|ZP_08071012.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242] gi|322399020|gb|EFY01539.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242] Length = 322 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 203/307 (66%), Positives = 246/307 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L+ + I ++ L D L L+EL E D +E + L+ + + + +Q E Sbjct: 1 MRERTQLEEQMGAIDKLSRDLEDALTLVELGEEAGDEDTEKEGVEALKAVLKDAQRRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +L SGEAD ND ++E+H+GAGGTESQDWA ML RMY RWAE++KFK E +E GEEAGI Sbjct: 61 ALFSGEADGNDTFIEIHSGAGGTESQDWARMLFRMYARWAERKKFKVEVIEETAGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS TLL+KG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD IE+ I+E Sbjct: 121 KSGTLLVKGHNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDRIEVNINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSA+RITHIPTG+VV CQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPTGIVVACQAERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KRE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + +PS+VLDG+LDD Sbjct: 241 ELELEKREAEANKAAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPSEVLDGELDD 300 Query: 346 FMKATLA 352 FM+A+LA Sbjct: 301 FMQASLA 307 >gi|49475632|ref|YP_033673.1| peptide chain release factor 2 [Bartonella henselae str. Houston-1] gi|49238439|emb|CAF27667.1| Peptide chain release factor 2 [Bartonella henselae str. Houston-1] Length = 322 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 211/308 (68%), Positives = 257/308 (83%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +MRERQ LD++I+ I+ L + + L+ + EE D I+ + ++++ +K E++ +Q Sbjct: 1 MMRERQRLDDSINGIRSFTKTLEECIELIAMGEEESDIEIITDAENSIRNLKSEIDKRQI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 ++LLSGEAD ND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAG Sbjct: 61 DALLSGEADQNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSATLL+KG NAYG LK E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++S Sbjct: 121 IKSATLLVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVS 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E+D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+L Sbjct: 181 EADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRAIAWSMLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P VL+G+LD Sbjct: 241 YEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLD 300 Query: 345 DFMKATLA 352 F++A LA Sbjct: 301 SFIEAALA 308 >gi|326387471|ref|ZP_08209080.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM 19370] gi|326208127|gb|EGD58935.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM 19370] Length = 375 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 205/351 (58%), Positives = 260/351 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DWD AV+RL L+ + EDP LW + +A+ +MRER+ LD AI +K+ Sbjct: 11 RIEGALALIRKFLDWDRAVRRLHELDARVEDPKLWDDPKQAEAVMRERRRLDAAIGTVKQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +EL E D + E L + + + ++LL+GEAD+N+A+LEV Sbjct: 71 IGQEMADAIEFVELGEMEGDEDTVAEGLATLAALAERADADKVQALLAGEADANNAFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMYTRWAE+ +K E ++ H GE AGIK TLLIKG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKGCTLLIKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+I+IEI+ +D ++DTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIDIEINPADLKVDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG++V Q +RSQHKN+A A MLRA+LYE EL KRE A+ + Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLRARLYEAELAKREAAASGEYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KTEIGWG QIRSYVLQPYQ VKDLRT + T+P++VLDG LD FM A L+ Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALS 361 >gi|329850508|ref|ZP_08265353.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19] gi|328840823|gb|EGF90394.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19] Length = 358 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 206/346 (59%), Positives = 255/346 (73%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++C GG+FDWD A++RL LN + EDP LW EA+ + RER L +I ++ ++ L Sbjct: 1 MDCSGGVFDWDVALRRLDELNARVEDPTLWDKPDEAQKINRERSKLSASIEAVRTLEKEL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + EL E D S+++E+ L+ +K + E+LLSGEAD NDAY+E+++GAG Sbjct: 61 KDAVEFAELGDMEGDESLIEESRAMLKGLKAHAGRAELEALLSGEADGNDAYVEINSGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA +L+RMYTRWA E E GE+AGIKS TL+IKG NAYGWLK E G Sbjct: 121 GTESCDWAGILMRMYTRWATAHGMTVEVEEETSGEQAGIKSTTLMIKGENAYGWLKTEAG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS++RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSSARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+THIPTG+ V CQ RSQH N+ +AW MLRA+LYE ELQKRE E KT+I Sbjct: 241 DSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYEQELQKREAAQQALEDQKTDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA Sbjct: 301 GWGHQIRSYVLQPYQMVKDLRTNVETSDSQGVLDGDLDAFMGASLA 346 >gi|154253713|ref|YP_001414537.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1] gi|154157663|gb|ABS64880.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1] Length = 322 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 208/310 (67%), Positives = 246/310 (79%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +MRER L+ AI + ++ L DNL L+E+ E D +I+ E L+ + + Sbjct: 1 MMRERTRLEEAIGRYRALEASLNDNLELIEMGEAEGDAAIVAEAEAALKAARDVAAEAEI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 E+LLSGEAD+ND Y+E+HAGAGGTESQDWA MLLRMYTRWAE++ +K E +E HDGEEAG Sbjct: 61 ETLLSGEADANDTYVEIHAGAGGTESQDWAQMLLRMYTRWAERKGYKVELMERHDGEEAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+L+KG NA+GWLK E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD I+IE+S Sbjct: 121 IKSATILVKGHNAFGWLKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDKIDIEVS 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E+D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQHKN+A AW+MLRA+L Sbjct: 181 EADVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQNERSQHKNRATAWDMLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE ELQKRE+ A S KT+IGWG QIRSYVLQPYQMVKDLRT +E + VL GDLD Sbjct: 241 YEAELQKREDAAAAQASGKTDIGWGHQIRSYVLQPYQMVKDLRTGVETSDTDGVLGGDLD 300 Query: 345 DFMKATLAIK 354 FM A LA + Sbjct: 301 PFMAAALAAR 310 >gi|218682869|ref|ZP_03530470.1| peptide chain release factor 2 [Rhizobium etli CIAT 894] Length = 267 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 198/248 (79%), Positives = 227/248 (91%) Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 E++LSGEA YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAG Sbjct: 5 EAMLSGEARQQRHYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAG 64 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+ Sbjct: 65 IKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEIN 124 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VVQCQQERSQHKN+A+AW+MLRA++ Sbjct: 125 ESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARM 184 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDGDL+ Sbjct: 185 YEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLN 244 Query: 345 DFMKATLA 352 +FM+A LA Sbjct: 245 EFMEAALA 252 >gi|87200328|ref|YP_497585.1| peptide chain release factor 2 [Novosphingobium aromaticivorans DSM 12444] gi|87136009|gb|ABD26751.1| bacterial peptide chain release factor 2 (bRF-2) [Novosphingobium aromaticivorans DSM 12444] Length = 375 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 204/351 (58%), Positives = 261/351 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DWD AV+RL LN + EDP LW + +A+ +MRER+ L+ +I + + Sbjct: 11 RIEAALALVRKFLDWDRAVRRLDELNARVEDPKLWDDPKKAEEVMRERRRLEASIGTVNQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +EL E D + E L + + + ++LL+GEAD+N+A+LEV Sbjct: 71 IGQEMADAIEFVELGEMEGDEDTINEGLATLAALAERADNDKVQALLAGEADANNAFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMYTRWAE+ +K E ++ H GE AGIKSATLLIKG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKSATLLIKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+IE+EI+ +D +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIEVEINPADLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG++V Q +RSQHKN+A A ML+A++YE EL KRE A+ + Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLKARIYEAELAKREAAASGEYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KTEIGWG QIRSYVLQPYQ VKDLRT + T+P++VLDG LD FM A L+ Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALS 361 >gi|296446781|ref|ZP_06888719.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b] gi|296255656|gb|EFH02745.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b] Length = 322 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 202/307 (65%), Positives = 247/307 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER +++ + I ++ L D L L+EL E+D +E L+ + + +Q E Sbjct: 1 MRERTQIEDQLGAIARLERDLDDALTLVELGESENDADTEKEGIAQLEALLKDARERQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +L SGEAD ND Y+EVH+GAGGTES DWA ML RMY RWAE++KFK E +E G+EAGI Sbjct: 61 ALFSGEADGNDTYIEVHSGAGGTESCDWARMLFRMYARWAERKKFKVEVIEETSGDEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD I+I+++E Sbjct: 121 KSATLLIKGMNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDKIDIQVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPSGIVVACQAERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KRE AN E+SKT+IGWG QIRSYVLQPYQ+VKDLRT +PS+VLDG+LDD Sbjct: 241 EMELKKREAEANAVEASKTDIGWGHQIRSYVLQPYQLVKDLRTGHTSGTPSEVLDGELDD 300 Query: 346 FMKATLA 352 FM+A+LA Sbjct: 301 FMQASLA 307 >gi|163868347|ref|YP_001609556.1| peptide chain release factor 2 [Bartonella tribocorum CIP 105476] gi|161018003|emb|CAK01561.1| peptide chain release factor RF-2 [Bartonella tribocorum CIP 105476] Length = 321 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 210/307 (68%), Positives = 255/307 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD++I+ + L + + L+ + EE D I+ + ++++ +K E++ +Q + Sbjct: 1 MRERQRLDDSINGLLSFTKTLEECIELIAMGEEESDVEIIADAENSIRHLKSEIDKRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEADSND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGI Sbjct: 61 VLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHEMKVEVLEIHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG NAYG LK E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE Sbjct: 121 KSATILVKGHNAYGLLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE N ESSKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P VL+G+LD Sbjct: 241 EEELKKREEETNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDA 300 Query: 346 FMKATLA 352 F++A L+ Sbjct: 301 FIEAALS 307 >gi|167646537|ref|YP_001684200.1| peptide chain release factor 2 [Caulobacter sp. K31] gi|189039999|sp|B0SXB7|RF2_CAUSK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|167348967|gb|ABZ71702.1| peptide chain release factor 2 [Caulobacter sp. K31] Length = 367 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 205/345 (59%), Positives = 255/345 (73%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 +C GG+FDWD A+++L LN + EDP LW EA+ + R+R L + ++E++ L Sbjct: 14 DCSGGVFDWDAALRKLDELNARVEDPTLWDRPSEAQAVSRDRASLAARVGAVQELEGGLK 73 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ELA E D ++L++ L+ +K + E+LLSGEAD ND Y+E+++GAGG Sbjct: 74 DALEYAELADMEGDEALLEDARAQLKDLKDRAGRAELEALLSGEADGNDCYVEINSGAGG 133 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TES DWA MLLRMY+RWA K E +E G++ GIKSATLL+KG NAYGWLK E GV Sbjct: 134 TESCDWAGMLLRMYSRWANAHKMSVELVEETAGDQVGIKSATLLVKGANAYGWLKTEAGV 193 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISPYD+ ++RHTSF+S WVYPVVDD+IEI+I+ SD R DTYRASGAGGQH+N TD Sbjct: 194 HRLVRISPYDAAAKRHTSFASAWVYPVVDDTIEIDINPSDVRTDTYRASGAGGQHINKTD 253 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+ V CQ RSQH+N+ +AW MLRA+LYE ELQ+RE E KT+IG Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQRREAAQQALEDQKTDIG 313 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGASLA 358 >gi|294084599|ref|YP_003551357.1| protein chain release factor B [Candidatus Puniceispirillum marinum IMCC1322] gi|292664172|gb|ADE39273.1| Protein chain release factor B [Candidatus Puniceispirillum marinum IMCC1322] Length = 369 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 210/352 (59%), Positives = 267/352 (75%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S L L +++ AV RL+ L +T P W + A+ +MRE+ L+ I+ IK++ Sbjct: 12 ISSTLELLRKHVNFEVAVARLNDLEAQTTMPDFWNDQAVAQDVMREKNRLERQINLIKDM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + L+EL + E D ++ E L ++ E + +Q ESLLSGEAD+ND +LE+H Sbjct: 72 QAEMDDCVALIELGIAEGDDDVVAEAEAVLTKLVTEADKRQLESLLSGEADANDCFLEIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA ML+RMY RW E+R +K +E GEEAGIKS T+ I G NAYGWLK Sbjct: 132 AGAGGTEAQDWAQMLVRMYGRWCEQRGYKVHLIEESAGEEAGIKSVTMRIDGENAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIE+ + D RIDTYRASGAGGQH Sbjct: 192 TESGVHRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEVEDKDLRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH+PT +VVQCQ +RSQH+N+A A+NML+A+LYELELQKREE A+ +S Sbjct: 252 VNKTDSAIRITHLPTNIVVQCQNDRSQHRNRATAFNMLKARLYELELQKREEAASDAAAS 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVL PYQMVKDLRTN+EK + VLDGDLD F++A+LA + Sbjct: 312 KTDIGWGNQIRSYVLHPYQMVKDLRTNVEKGNAQGVLDGDLDSFIEASLAAR 363 >gi|295689553|ref|YP_003593246.1| hypothetical protein Cseg_2164 [Caulobacter segnis ATCC 21756] gi|295431456|gb|ADG10628.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756] Length = 373 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 208/339 (61%), Positives = 250/339 (73%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DWD A+++L LN + EDP LW EA+ + RER L + ++ I+ L D + Sbjct: 23 LDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERAALAAKVEAVQSIERDLKDAVEYA 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA E D L + L+ +K + E+LLSGEAD NDAY+E+++GAGGTES DW Sbjct: 83 ELADMEGDEESLNDARVQLKALKDRAGRAELEALLSGEADGNDAYIEINSGAGGTESCDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A +LLRMYTRWA +TE +E DG++AGIKSATLL+KGPNAYGWLK E GVHRLVRI Sbjct: 143 AGILLRMYTRWANAHGMQTELIEETDGDQAGIKSATLLVKGPNAYGWLKTEAGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDS++RRHTSF+S WVYPVVDD+IEIEI+ +D R DTYRASGAGGQH+N TDSAVR+T Sbjct: 203 SPYDSSARRHTSFASAWVYPVVDDTIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+ V CQ RSQH+N+ +AW MLRA+LYE ELQKRE E KT+IGWG QIR Sbjct: 263 HIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQMVKDLRTN+E + VLDGDLD FM A LA Sbjct: 323 SYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGAALA 361 >gi|83858490|ref|ZP_00952012.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633] gi|83853313|gb|EAP91165.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633] Length = 316 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 200/307 (65%), Positives = 240/307 (78%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER LD +++ ++EI L D L L E+A E D + Q+ ++ L+ ++ + + Sbjct: 1 MRERNRLDQSMTEVQEIVADLADTLELAEMAEMEGDDDLYQDATEALKALRARAGKAELQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD ND+YLE+H GAGGTE+QDWA+ML RMYTRWAEK FK E +E GEEAG+ Sbjct: 61 ALLSGEADGNDSYLEIHPGAGGTEAQDWASMLARMYTRWAEKSGFKVEVIEAQAGEEAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T+L+KG NAYGWLK E GVHRLVRISPYDS+ RRHTSF+S+W YP+VDD+IEIEI + Sbjct: 121 KSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIED 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R+DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQHKN+A AW MLRA+LY Sbjct: 181 KDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRANAWTMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELELQKREE A SKT+IGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLDD Sbjct: 241 ELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDD 300 Query: 346 FMKATLA 352 FM A LA Sbjct: 301 FMAAALA 307 >gi|192291110|ref|YP_001991715.1| hypothetical protein Rpal_2731 [Rhodopseudomonas palustris TIE-1] gi|192284859|gb|ACF01240.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 376 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 214/339 (63%), Positives = 268/339 (79%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D + RL+ LN EDP LW + +A+ LM+ER L+++++ I +++ L DN+ ++ Sbjct: 23 LDVDQSTVRLAELNKLAEDPDLWNDPQKAQKLMQERTSLEDSLTGIGKVERELTDNIEMI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL E D I++E D L+ +K EV ++ E+LLSGEAD D YLEVHAGAGGTESQDW Sbjct: 83 ELGEAEGDEGIVKEAEDALKALKKEVARRELEALLSGEADRFDTYLEVHAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLRMY RWAEK FK E LE +GEEAGIKSAT+ I G NAYGWLK E GVHRLVRI Sbjct: 143 ASMLLRMYVRWAEKHGFKIEYLEESEGEEAGIKSATIQISGHNAYGWLKTEAGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+ESD R+DT R+ GAGGQHVN T+SAVR+T Sbjct: 203 SPFDSNARRHTSFSSVQIFPVIDNSIKIDIAESDVRVDTMRSGGAGGQHVNKTESAVRLT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTGV V CQ RSQHKN+AQAW+MLRA+LYE+EL+KREE A +++KTEIGWG QIR Sbjct: 263 HIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQAAKTEIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQMVKDLRT ++ + + VLDGDLD+FM ATLA Sbjct: 323 SYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLA 361 >gi|56551094|ref|YP_161933.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761334|ref|ZP_04759422.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753249|ref|YP_003226142.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56542668|gb|AAV88822.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ZM4] gi|241374241|gb|EER63738.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552612|gb|ACV75558.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 375 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 206/346 (59%), Positives = 264/346 (76%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L DWD A++RL LN + EDP LW + A+ +MRER LD +I+ + I L Sbjct: 16 LALLRRFLDWDRALRRLDELNARVEDPSLWDDARAAQEVMRERGRLDESIAATRAIATEL 75 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +N+ L+E+A E + ++Q+ L+ + + + ++LLSGEAD ND Y+EV+AGAG Sbjct: 76 QENIELIEMAEAEGEEEMVQDAISALESLAERADRDKVKALLSGEADGNDTYIEVNAGAG 135 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA ML RMY RWAE++ FK E ++ H GE+AGIKSATLL+KG +AYG+ K E G Sbjct: 136 GTESQDWAEMLSRMYQRWAERQGFKVELVDYHAGEQAGIKSATLLVKGESAYGYAKTENG 195 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DSN+RRHTSF+S+ VYPVVDD I+IE+ + D +IDTYR+SGAGGQHVNTT Sbjct: 196 VHRLVRISPFDSNARRHTSFASVAVYPVVDDDIDIEVLDKDLKIDTYRSSGAGGQHVNTT 255 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ +RSQHKN+A+A L+A+LYE ELQ RE A+ G ++K+EI Sbjct: 256 DSAVRITHMPTGIVVACQNQRSQHKNRAEAMKQLKARLYERELQIREAEASAGYAAKSEI 315 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVLQPYQ+VKDLRT I T+P+DVLDG+LD F+ A LA Sbjct: 316 GWGHQIRSYVLQPYQLVKDLRTGITSTAPADVLDGNLDAFIAAALA 361 >gi|146340475|ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobium sp. ORS278] gi|146193281|emb|CAL77297.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS278] Length = 323 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 200/307 (65%), Positives = 248/307 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L DN+ ++EL E+D ++ E + L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELSDNIEMIELGEAENDAGVVAEAENALKELKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMYTRWAE FK E LE GEEAGI Sbjct: 61 ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEYLEESLGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+DDSI+I+I E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + S VL+GDLD+ Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMAATLA 307 >gi|148255578|ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobium sp. BTAi1] gi|146407751|gb|ABQ36257.1| bacterial peptide chain release factor 2 (bRF-2) [Bradyrhizobium sp. BTAi1] Length = 323 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 201/307 (65%), Positives = 247/307 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L DN+ ++EL E+D ++ E + L+ +K +V ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERDLSDNIEMIELGEAENDAGVVTEAENALKALKKDVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA MLLRMYTRWAEK FK E LE GEEAGI Sbjct: 61 ALLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMAATLA 307 >gi|304391525|ref|ZP_07373467.1| peptide chain release factor 2 [Ahrensia sp. R2A130] gi|303295754|gb|EFL90112.1| peptide chain release factor 2 [Ahrensia sp. R2A130] Length = 374 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 200/351 (56%), Positives = 262/351 (74%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++ ++ L DW+ A RL LN +EDP LW + +A++LM+ERQ L+ I+ I Sbjct: 11 EITQAISLLRRHLDWEKANTRLEELNAASEDPDLWNDPGKAQLLMKERQQLETGITSING 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L+ELA EDD +L E L+ + ++ +Q +LLSGEAD+ND Y EV Sbjct: 71 LEGDLGDTKDLIELAEMEDDADVLAEAESALRELHADLGKRQAATLLSGEADANDTYFEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+GAGGTES DWANMLLRMY RWAE +K E G+EAGIK+AT+L+KG NAYG++ Sbjct: 131 HSGAGGTESNDWANMLLRMYIRWAETNGYKVEVQATTSGDEAGIKAATVLVKGANAYGYM 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPV+DD+IEI + +++ R+DT+R+SGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSQAKRHTSFSSVWVYPVIDDNIEIIVPDNEIRLDTFRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV E+SQH+N+A A L+++LYE E+QKR E Sbjct: 251 HVNTTDSAVRITHIPTGIVV-TSSEKSQHQNRANAMKALKSRLYEAEMQKRNEATQAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVLQPYQ+VKDLRT +E T+PS VLDGDL+ FM+A LA Sbjct: 310 AKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPSAVLDGDLNAFMEAALA 360 >gi|315499977|ref|YP_004088780.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48] gi|315417989|gb|ADU14629.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48] Length = 373 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 206/339 (60%), Positives = 248/339 (73%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DWD A++RL LN + EDP LW EA+ +MRER L + + + L D L Sbjct: 23 LDWDVALRRLDELNARVEDPTLWDKPEEAQSVMRERTKLSGGVDAVNSLTKELQDALDYA 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA E D +L+E L+ IK + + E+LLSGEAD NDAY+E+++GAGGTES DW Sbjct: 83 ELADMEGDEELLEEARAMLKAIKEKAARAELEALLSGEADGNDAYVEINSGAGGTESCDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A +LLRMYTRWA + E GE+AGIKSAT+++KG NAYGWLK E GVHRLVRI Sbjct: 143 AGILLRMYTRWATQHGMTVSIEEETPGEQAGIKSATIMVKGTNAYGWLKTEAGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQHVN TDSAVR+T Sbjct: 203 SPFDSNARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQHVNKTDSAVRLT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+ V CQ RSQH N+ +AW MLRA+LYELELQKRE E KT+IGWG QIR Sbjct: 263 HIPTGIAVACQAGRSQHANRDEAWKMLRARLYELELQKREAAQAALEDQKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQMVKDLRT++E + VLDGDLD FM A+LA Sbjct: 323 SYVLQPYQMVKDLRTDVETSDSQGVLDGDLDAFMGASLA 361 >gi|330991179|ref|ZP_08315132.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1] gi|329761765|gb|EGG78256.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1] Length = 333 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 196/313 (62%), Positives = 248/313 (79%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W + A+ LMRER L N I ++ ++ + D L L+ELA E D +++ E L+ Sbjct: 1 MWNDAEAAQKLMRERTLLANQIEGVQRLEADVNDTLELVELAEMEGDSAVVAEAVAGLRA 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E + ++ ESLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K Sbjct: 61 LAEEAKRRETESLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTM 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E +GE+AGIKSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV Sbjct: 121 MESSEGEQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPV 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDDSIEIEI+E+D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A Sbjct: 181 VDDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRA 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+A++YE ELQKRE A E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+ Sbjct: 241 TAMTMLKARMYEQELQKREAAAAQTEANKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKTN 300 Query: 335 PSDVLDGDLDDFM 347 P +LDGD+DDFM Sbjct: 301 PDAILDGDIDDFM 313 >gi|296533603|ref|ZP_06896168.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957] gi|296266065|gb|EFH12125.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957] Length = 376 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 198/339 (58%), Positives = 254/339 (74%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DWD A++RL +N + EDP LW+ EA+ +MRER L + + +K+++ + D L L+ Sbjct: 23 LDWDVALRRLDEVNARAEDPTLWEKPDEAQAVMRERNRLADQVEGVKKLEQDVKDALELI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA E D + +L E + ++ ESLLSGEAD D ++EV+AGAGGTE+QDW Sbjct: 83 ELAEAEGDGATADAAIADLHSFAAEAKRREIESLLSGEADMRDCFVEVNAGAGGTEAQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAEKR +K + E +GE+AGIKSAT+ + GPNAYGWLK E GVHRLVRI Sbjct: 143 AQMLLRMYQRWAEKRGYKVQLTEESEGEQAGIKSATIQVTGPNAYGWLKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ +RR TSF+S++V+PV+DD IEIEI+ +D + DT+RASGAGGQHVN T+S VR T Sbjct: 203 SPFDAAARRQTSFASVYVFPVIDDKIEIEINPADLKTDTFRASGAGGQHVNKTESGVRFT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+V Q+RSQH+N+ A ML+A+LYELEL+KREEI E+ KT+IGWG QIR Sbjct: 263 HIPTGIVAASTQDRSQHRNRVIAMEMLKARLYELELRKREEITAGIEAGKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVL PYQ+VKDLRTN+EK +P VLDG+LDDFM A LA Sbjct: 323 SYVLAPYQLVKDLRTNVEKGNPDAVLDGELDDFMAAALA 361 >gi|58039738|ref|YP_191702.1| peptide chain release factor 2 [Gluconobacter oxydans 621H] gi|58002152|gb|AAW61046.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Gluconobacter oxydans 621H] Length = 322 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 199/307 (64%), Positives = 245/307 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L N I ++ I+ + L L+ELA E D S++Q+ L+ I +V ++ E Sbjct: 1 MRERTTLANQIEGVQRIESEVEGTLELVELAEMEGDESLVQDAVQTLRAIAEDVRKREIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEADSND Y+EV+AGAGGTE+QDWA MLLRMYTRWAE+ +K +E +GE+AGI Sbjct: 61 SLLSGEADSNDCYVEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTFIEGSEGEQAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEI+I++ Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIDIND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT+RASGAGGQHVN TDSA+RITHIPTG+VV CQ +RSQH+N+A+A MLRA++Y Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLRARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKRE A E+SKT+IGWG QIRSYVL PYQ+VKDLRT +EK +P VLDG LDD Sbjct: 241 EAELQKREAAAAQTEASKTDIGWGHQIRSYVLAPYQLVKDLRTGVEKGNPGAVLDGALDD 300 Query: 346 FMKATLA 352 FM A+LA Sbjct: 301 FMSASLA 307 >gi|83593375|ref|YP_427127.1| peptide chain release factor 2 [Rhodospirillum rubrum ATCC 11170] gi|83576289|gb|ABC22840.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodospirillum rubrum ATCC 11170] Length = 322 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 204/309 (66%), Positives = 238/309 (77%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER HL+ +++ + ++ + D L+EL EDD + E L + ++ E Sbjct: 1 MRERTHLEQSVAGYRALEREVDDAATLIELGDAEDDAESIAEGERMLHSAAQKARKQELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD NDAYLEVHAGAGGTE+QDWA +LLRMYTRWAE K E LE GEEAGI Sbjct: 61 SLLSGEADHNDAYLEVHAGAGGTEAQDWALILLRMYTRWAEAHGHKVEFLEESAGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DS++RRHTSFSSIWVYPVVDD+IEI+I E Sbjct: 121 KSATIKIVGHNAYGWLKTESGVHRLVRISPFDSSARRHTSFSSIWVYPVVDDTIEIDIEE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 DCRIDTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQH+NK W+MLRA+LY Sbjct: 181 KDCRIDTYRASGAGGQHVNRTESAVRITHIPTGIVVQCQSERSQHQNKDYCWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKREE E +KT+IGWG QIRSYVLQPYQM+KD RTN+E + VL+GDLD Sbjct: 241 EHELQKREEKTKALEDTKTDIGWGHQIRSYVLQPYQMIKDTRTNVETSDTQGVLNGDLDQ 300 Query: 346 FMKATLAIK 354 FM A+LA + Sbjct: 301 FMAASLAAR 309 >gi|158425248|ref|YP_001526540.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571] gi|158332137|dbj|BAF89622.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571] Length = 376 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 203/336 (60%), Positives = 260/336 (77%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D + +RL+ LN EDP LW + A+ +M+ER L++A++ I I L DN+ L+EL Sbjct: 26 DRSRRRLAELNAIAEDPTLWDDPERAQKIMQERTSLEDALNAIDRITRDLTDNIELIELG 85 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E D S++ E + L +K E+ ++ ++LLSGEADSND YLEVHAGAGGT+SQDWA M Sbjct: 86 EAEGDESVITEAAGALDALKAELARRELDALLSGEADSNDTYLEVHAGAGGTDSQDWAEM 145 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY RW E+ FK E ++ GE+AG+KSAT+++KG NAYGWLK E GVHRLVRISP+ Sbjct: 146 LLRMYRRWCERHGFKVELVDESAGEQAGLKSATIIVKGHNAYGWLKTEAGVHRLVRISPF 205 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 DSN+RR TSF+SI VYPV+DD I +EI+ESD R+DT R+ GAGGQHVN T+SAVR+THIP Sbjct: 206 DSNARRQTSFASIDVYPVIDDRIVVEINESDVRVDTMRSGGAGGQHVNKTESAVRLTHIP 265 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TG+ V Q +RSQHKN+A AWNMLRAKL+E+EL+KREE A ++++T+IGWG QIRSYV Sbjct: 266 TGIAVVSQGDRSQHKNRATAWNMLRAKLFEMELKKREEAAAAEQAARTDIGWGHQIRSYV 325 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 LQPYQ+VKDLRT + +P +VLDGDLD FM+A LA Sbjct: 326 LQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALA 361 >gi|306840415|ref|ZP_07473178.1| peptide chain release factor 2 [Brucella sp. BO2] gi|306289615|gb|EFM60824.1| peptide chain release factor 2 [Brucella sp. BO2] Length = 292 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 192/278 (69%), Positives = 237/278 (85%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + EE D SI+++ ++ +K E++ +Q + LLSGEAD+ND YLEVHAGAGGTESQDWA Sbjct: 1 MGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEVHAGAGGTESQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +MLLRMYTRWAE+ K E +E+H+GEEAGIKSAT+L+KG N+YG LK E GVHRLVRIS Sbjct: 61 SMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGMLKTESGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 PYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQHVNTTDSAVRITH Sbjct: 121 PYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 I TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE + ++KT+IGWG QIRS Sbjct: 181 IATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANATKTDIGWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 YVLQPYQ+VKDLRT +E T+P +VLDG + FM+A LA Sbjct: 241 YVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALA 278 >gi|85715460|ref|ZP_01046441.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A] gi|85697655|gb|EAQ35531.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A] Length = 322 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 201/307 (65%), Positives = 248/307 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L D + ++EL E+D +++ E+ + L+ ++ EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAVITESENALKTLRKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA MLLRMY RWAEKR FK E LE GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWAQMLLRMYARWAEKRGFKVEYLEETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E Sbjct: 121 KSATVQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + S VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMAATLA 307 >gi|302383300|ref|YP_003819123.1| hypothetical protein Bresu_2190 [Brevundimonas subvibrioides ATCC 15264] gi|302193928|gb|ADL01500.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC 15264] Length = 373 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 200/341 (58%), Positives = 250/341 (73%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DWD A ++L LN + EDP LW + A+ + RER L I + E++ L + ++L Sbjct: 23 LDWDVANRKLDELNARVEDPTLWNDPDAAQAVSRERSRLKTQIDTVLEMESGLEEGVMLA 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++A EE D + L+E L+ IK + E+LLSGEAD NDAYLEV++GAGGTES DW Sbjct: 83 DMADEEGDEATLEEARAALKAIKDRASRAELEALLSGEADGNDAYLEVNSGAGGTESCDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY+RWA+ ++ + DG++AGIKSAT+L+ GPNAYGWLK E GVHRLVRI Sbjct: 143 AGMLLRMYSRWAKAHGYEVQIEASEDGDQAGIKSATILVTGPNAYGWLKSESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYD+ ++RHTSF+S+ V PVVDD+IEI+I+ +D R DTYRASG+GGQH+N TDSAVR+T Sbjct: 203 SPYDAAAKRHTSFASVGVSPVVDDTIEIDINPADVRTDTYRASGSGGQHINKTDSAVRLT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPT VV CQ RSQH+N+ QAW MLR +LYELELQKRE A +KT+IGWG QIR Sbjct: 263 HIPTNTVVACQAGRSQHQNREQAWKMLRGRLYELELQKREAAAQALADAKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SYVLQPYQMVKDLRT +E + VLDGDLD FM A LA + Sbjct: 323 SYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAAR 363 >gi|163795148|ref|ZP_02189116.1| Protein chain release factor B [alpha proteobacterium BAL199] gi|159179546|gb|EDP64075.1| Protein chain release factor B [alpha proteobacterium BAL199] Length = 322 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/309 (63%), Positives = 246/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+ + + ++ L D L+L+EL E D + + + L+ I+++ E Q E Sbjct: 1 MQERTRLEKQLGEVNQLNQGLEDALMLIELGETEGDDATVADAEKELEAIRVKAESMQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND YLEVHAGAGGTE+QDWA MLLRMYTRW+E+R FK E LE GEEAG+ Sbjct: 61 SLLSGEADANDCYLEVHAGAGGTEAQDWAEMLLRMYTRWSERRGFKVEWLEESQGEEAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISPYDS +RRHTSFSS WVYPV+DDSI+I + + Sbjct: 121 KSATVKISGHNAYGWLKIESGVHRLVRISPYDSQARRHTSFSSAWVYPVIDDSIDIVVED 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D ++DTYRASGAGGQHVN TDSA+RITH+P+G+VVQCQ +RSQH+N+A A ML+A+LY Sbjct: 181 KDLKVDTYRASGAGGQHVNRTDSAIRITHLPSGIVVQCQADRSQHRNRATAMEMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL++REE A+ E++K++IGWG QIRSYVLQPYQMVKDLRTN E ++P+ VLDGD+D Sbjct: 241 EAELKRREEEASATEATKSDIGWGHQIRSYVLQPYQMVKDLRTNEESSNPAAVLDGDIDA 300 Query: 346 FMKATLAIK 354 F++A LA + Sbjct: 301 FLEAALAAR 309 >gi|75675907|ref|YP_318328.1| peptide chain release factor 2 [Nitrobacter winogradskyi Nb-255] gi|74420777|gb|ABA04976.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter winogradskyi Nb-255] Length = 322 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 199/307 (64%), Positives = 250/307 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L D + ++EL E+D +++ E+ + L+ +K EV+ ++ E Sbjct: 1 MQERTSLEDSLAGIGKVERELEDQIGMIELGEAENDEAVIDESENALKALKKEVDRRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA MLLRMYTRWAEKR FK E LE GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWAAMLLRMYTRWAEKRGFKVEYLEETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E Sbjct: 121 KSATVQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL++REE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + S VLDG+LDD Sbjct: 241 EIELKRREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGNLDD 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMAATLA 307 >gi|85708766|ref|ZP_01039832.1| protein chain release factor B [Erythrobacter sp. NAP1] gi|85690300|gb|EAQ30303.1| protein chain release factor B [Erythrobacter sp. NAP1] Length = 375 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 199/339 (58%), Positives = 259/339 (76%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DW+ A++RL LN + +DP LW + EA+ + RE++ L++A++ + EI + D + + Sbjct: 23 LDWERALRRLDELNARVQDPTLWDDPKEAQKISREQKQLEDAVNTVNEISAEMGDAVEFI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ E + SI+ + +L+++ + + ++LLSGEAD ND YLE+HAGAGGTESQDW Sbjct: 83 EMGEAEGEESIVNDGLKSLEKLAARADADKVQALLSGEADGNDTYLEIHAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY RWAE+R FK E +E G++AGIKSATLL+KG NAYG+ K E GVHRLVRI Sbjct: 143 AEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGDNAYGYAKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDS ++RHTSFSS+WVYPV+DD I+IEI+ +D +IDTYRASGAGGQHVNTTDSAVRIT Sbjct: 203 SPYDSAAKRHTSFSSVWVYPVIDDDIDIEINPADLKIDTYRASGAGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VV Q +RSQHKN+A A NML+A+L+E E+ +RE A+ K+EIGWG QIR Sbjct: 263 HQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQEKSEIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQMVKDLRT + +SP VLDGD+DD++ A LA Sbjct: 323 SYVLQPYQMVKDLRTGVTSSSPDRVLDGDIDDYISAALA 361 >gi|299133776|ref|ZP_07026970.1| peptide chain release factor 2 [Afipia sp. 1NLS2] gi|298591612|gb|EFI51813.1| peptide chain release factor 2 [Afipia sp. 1NLS2] Length = 322 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 201/307 (65%), Positives = 247/307 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+N + I + L D + ++EL E+D +++ E + L+ +K +V ++ E Sbjct: 1 MQERTSLENQLGGIGRTERELEDQIGMIELGEAENDEAVVTEAENALKALKKDVARQELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMYTRWAE++ FK E LE GEEAGI Sbjct: 61 ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEYLEETQGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSI ++PVVD+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIKIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + S VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMAATLA 307 >gi|83951928|ref|ZP_00960660.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM] gi|83836934|gb|EAP76231.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM] Length = 375 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 202/352 (57%), Positives = 250/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L DWD A RL N + EDP+LW + +A+ LMRERQ L +AI Sbjct: 11 EIEKSLELLRQRMDWDTAKHRLEEFNARVEDPNLWDDPAKAQKLMRERQSLVDAIDTHDA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + DN+ L+EL E D ++ E L+ +K + K+ E+LL+GEAD+ND +LE+ Sbjct: 71 INQEMSDNIELIELGEMEGDNEVIGEAESALKSLKEKAGAKELEALLNGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEKR + E GEEAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD IEIE++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDDIEIEVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAM 361 >gi|110680026|ref|YP_683033.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114] gi|123361814|sp|Q165J6|RF2_ROSDO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|109456142|gb|ABG32347.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114] Length = 374 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 201/352 (57%), Positives = 254/352 (72%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ L D + A RL N + EDP LW + A+ LMRERQ L +A++ Sbjct: 11 KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRERQMLVDAMATHDS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + DN+ L+EL EDD ++ + + L+ ++ K+ E+LL GEADSND +LEV Sbjct: 71 IKQEMADNIELIELGEMEDDADVVSDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEK+ +K E + DG+EAGIKSAT I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+IE++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLAL 361 >gi|163731562|ref|ZP_02139009.1| peptide chain release factor 2 [Roseobacter litoralis Och 149] gi|161395016|gb|EDQ19338.1| peptide chain release factor 2 [Roseobacter litoralis Och 149] Length = 374 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 200/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ L D + A RL N + EDP LW + A+ LMR+RQ L +A++ Sbjct: 11 KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRDRQMLVDAMATHDN 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + DN+ L+EL EDD ++ + + L+ ++ K+ E+LL GEADSND +LEV Sbjct: 71 IKQEMADNIELIELGEMEDDADVITDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWANML RMY RWAEK+ +K E + DG+EAGIKSAT I G NAYGWL Sbjct: 131 NAGAGGTESCDWANMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+I+++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIDVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLAL 361 >gi|92117370|ref|YP_577099.1| peptide chain release factor 2 [Nitrobacter hamburgensis X14] gi|91800264|gb|ABE62639.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter hamburgensis X14] Length = 322 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 199/309 (64%), Positives = 250/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L D + ++EL E+D +I+ ++ + L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAIVNDSENALKNLKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD + YLEVHAGAGGTESQDWA+MLLRMY RWAEKR FK E LE GEEAGI Sbjct: 61 ALLSGEADRFNTYLEVHAGAGGTESQDWASMLLRMYARWAEKRGFKIEYLEETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + S VLDGDLD+ Sbjct: 241 QIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA K Sbjct: 301 FMAATLAQK 309 >gi|254477534|ref|ZP_05090920.1| peptide chain release factor 2 [Ruegeria sp. R11] gi|214031777|gb|EEB72612.1| peptide chain release factor 2 [Ruegeria sp. R11] Length = 374 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 201/351 (57%), Positives = 252/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L DW+ A RL N + EDP+LW + A+ LMRERQ L +AI K I Sbjct: 12 IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRERQMLVDAIDTYKSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL EDD ++++ + L +K + K+ E+LL GEADSND +LE++ Sbjct: 72 KQELADNIELIELGEMEDDNEVVKDAEEALVALKEKAAEKELEALLDGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E G+EAGIKSA I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ +D R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPADIRVDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY+ EL +R N + Sbjct: 252 VNTTDSAVRITHIPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|163739752|ref|ZP_02147160.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107] gi|163741027|ref|ZP_02148420.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10] gi|161386018|gb|EDQ10394.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10] gi|161386982|gb|EDQ11343.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107] Length = 374 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 202/351 (57%), Positives = 251/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L DW+ A RL N + EDP+LW + A+ LMR+RQ L +AI K I Sbjct: 12 IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRDRQMLVDAIDTYKSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL E+D ++ + L+ +K + K+ E+LL GEADSND +LE++ Sbjct: 72 KQDLSDNMELIELGEMEEDAEVISDAEAALKTLKEKAAEKELEALLDGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 252 VNTTDSAVRITHEPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNADINAAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|254510235|ref|ZP_05122302.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11] gi|221533946|gb|EEE36934.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11] Length = 375 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 200/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L D++ A+ RL N + EDP+LW N A+ LMRERQ L +AI + Sbjct: 11 EIEKSLELLAQRMDYETALHRLEEFNARVEDPNLWDNPENAQKLMRERQMLVDAIETYES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++Q+ D +Q+++ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKTDLSDNIELIELGEMEEDGEVVQDAEDAIQKLRAKSAKKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ + E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYTVELQSETAGEEAGIKSAAYKITGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV E+SQH+N+ A L+++LY+ EL +R N Sbjct: 251 HVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMAATLAL 361 >gi|114798643|ref|YP_760613.1| peptide chain release factor 2, programmed frameshift [Hyphomonas neptunium ATCC 15444] gi|123128746|sp|Q0C0Y0|RF2_HYPNA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|114738817|gb|ABI76942.1| peptide chain release factor 2, programmed frameshift [Hyphomonas neptunium ATCC 15444] Length = 368 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 204/339 (60%), Positives = 252/339 (74%), Gaps = 2/339 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DWD A +RL L +E P+ W + EA+ +MRERQ L + I+ ++ ++ + D L+ Sbjct: 23 LDWDTATKRLDELTALSERPNFWDDPQEAQAMMRERQKLADGIALVQTLEKDVADAPELM 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA E D S+L + L+R + +LLSGEAD ND YL+++AG GGTESQDW Sbjct: 83 ELA--EGDASMLADLEATLRRAAARAAEAELAALLSGEADGNDCYLQINAGEGGTESQDW 140 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A++L RMY RWAEKR + E L+ DGEEAGIKSATL IKG NAYGWLK EQGVHRLVRI Sbjct: 141 ASILRRMYVRWAEKRGYGVELLDERDGEEAGIKSATLQIKGENAYGWLKSEQGVHRLVRI 200 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS++RRHTSFSS+ V PV+DD I++EI+ SD R DTYRASGAGGQHVN TDSAVR+T Sbjct: 201 SPFDSSARRHTSFSSVAVSPVIDDKIDVEINPSDVRTDTYRASGAGGQHVNRTDSAVRLT 260 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPT VVQCQ RSQH+N+ +AW MLR+KLYELELQKR +A+ + K+ IG+G QIR Sbjct: 261 HIPTNTVVQCQAGRSQHQNRDEAWKMLRSKLYELELQKRRAVADAQYADKSAIGFGHQIR 320 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQMVKDLRT +E + S VLDGD+D F+ A LA Sbjct: 321 SYVLQPYQMVKDLRTEVETSDTSGVLDGDIDRFLSAALA 359 >gi|260575218|ref|ZP_05843218.1| peptide chain release factor 2 [Rhodobacter sp. SW2] gi|259022478|gb|EEW25774.1| peptide chain release factor 2 [Rhodobacter sp. SW2] Length = 375 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 207/351 (58%), Positives = 245/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL +N ED LW + A+ LMRERQ L +AIS K I Sbjct: 12 IGRSLALLGQRMDVETAPHRLEEMNAMIEDGDLWSDPARAQKLMRERQALLDAISTHKLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+E+ E D I+ E L+ + K+ E+LL GEAD ND +LEV+ Sbjct: 72 ETGLRDNVELIEMGEAEGDAEIVSEAEQALRDLVELARGKELEALLDGEADGNDTFLEVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E + DGEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPAGDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ LRA+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREACMVALRARLYQLELDKRNAAVNAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMAATLAM 361 >gi|149184652|ref|ZP_01862970.1| protein chain release factor B [Erythrobacter sp. SD-21] gi|148831972|gb|EDL50405.1| protein chain release factor B [Erythrobacter sp. SD-21] Length = 375 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 198/339 (58%), Positives = 257/339 (75%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DW+ A++RL L+ + +DP LW + +A+ + +E++ L+ AI+ ++EI+ + D + + Sbjct: 23 LDWERALRRLDELDARVQDPTLWDDPKQAQAITQEQKRLETAINTVREIESEMGDAMEFV 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ E D ++ E +L + + + ++LLSGEAD ND+Y+E+HAGAGGTESQDW Sbjct: 83 EMGEAEGDDDVVNEGLTSLSTLADRADRDKVQALLSGEADGNDSYIEIHAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY RWAE+R FK E +E G++AGIKSATLL+KG NAYG+ K E GVHRLVRI Sbjct: 143 AEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGENAYGYAKTESGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPYDS++RRHTSFSS+WVYPV+DD I+IEI+ SD +IDTYRASGAGGQHVNTTDSAVRIT Sbjct: 203 SPYDSSARRHTSFSSVWVYPVIDDDIDIEINPSDLKIDTYRASGAGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VV Q +RSQHKNKA A NML+A+L+E E+ +RE A+ K++IGWG QIR Sbjct: 263 HQPTGIVVASQNDRSQHKNKATAMNMLKARLFEREMAEREAAASGEYQEKSDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQMVKDLRT + +P DVLDG LD F+ A LA Sbjct: 323 SYVLQPYQMVKDLRTGVTSPTPDDVLDGALDPFISAALA 361 >gi|254467077|ref|ZP_05080488.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I] gi|206687985|gb|EDZ48467.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I] Length = 375 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 199/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L +W+ A RL N + EDP+LW + A+ LMRERQ L ++I+ K Sbjct: 11 EIEKSLELLAQRMNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQALVDSINTYKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++++ ++L+ +K K+ E+LL GEAD+ND +LE+ Sbjct: 71 IKQDLSDNIELIELGEMEEDAEVVKDAEESLKALKERAAEKELEALLDGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEK+ +K E G+EAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ SD R+DTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRVDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY+ EL +R N Sbjct: 251 HVNTTDSAVRITHIPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQQELDRRHAEINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETSDTKGVLDGDLDGFMAATLAM 361 >gi|329114780|ref|ZP_08243537.1| Peptide chain release factor 2 [Acetobacter pomorum DM001] gi|326695911|gb|EGE47595.1| Peptide chain release factor 2 [Acetobacter pomorum DM001] Length = 333 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/320 (60%), Positives = 246/320 (76%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W + A+ +MRER L N I ++ ++ + D L+ELA E D ++ E L+ Sbjct: 1 MWNDSDAAQKMMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRD 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E + ++ ESLLSGEADSND YLEV+AGAGGTE+QDW MLLRMYTRWAE +K Sbjct: 61 LAEEAKRRETESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTL 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E +GE+AG+KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV Sbjct: 121 MESSEGEQAGLKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPV 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DDSIEIEI+++D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A Sbjct: 181 IDDSIEIEINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRA 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A MLRA+LYE ELQKRE A E++KT+IGWG QIRSYVL PYQMVKDLRT +E + Sbjct: 241 TAMQMLRARLYEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGN 300 Query: 335 PSDVLDGDLDDFMKATLAIK 354 P VLDGDLD FM A LA++ Sbjct: 301 PDAVLDGDLDAFMAAALAMR 320 >gi|254294252|ref|YP_003060275.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814] gi|254042783|gb|ACT59578.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814] Length = 370 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 195/351 (55%), Positives = 255/351 (72%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + + L DWD + +RL LN +EDP W + A+ LMRER + A+ I Sbjct: 11 KIQQSIELLRRRLDWDVSSKRLEELNALSEDPDFWNDAENAQKLMRERTKIVTAMDDITA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D + E+A E D S+L++ ++++ + E + +LLSGE D ND ++E+ Sbjct: 71 LETEISDAEEMAEMAEMEGDDSLLEDIVESMKAALIRAERAELSALLSGEVDGNDCFVEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTESQDWANML RMY RWA K E L+ HDGEEAGIKSATL + G NAYGWL Sbjct: 131 NAGAGGTESQDWANMLRRMYVRWANAHGMKVEELDSHDGEEAGIKSATLKVSGENAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN++RHTSFSS+ V PV+DD+IE+EI + D R DTYRASG+GGQ Sbjct: 191 KSESGVHRLVRISPFDSNAKRHTSFSSVAVSPVLDDTIEVEIEDKDVRTDTYRASGSGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSA+R+TH PTG+VV CQ +RSQHKN+A AWNMLRA++YEL++++R E A Sbjct: 251 HINKTDSAIRLTHAPTGIVVACQSDRSQHKNRASAWNMLRARIYELKMRERAEAAQANAD 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KT+IGWG QIRSYVLQPYQM+KDLRT +E + VLDGDLD F+ A+L+ Sbjct: 311 AKTDIGWGHQIRSYVLQPYQMIKDLRTGVETSDTKGVLDGDLDKFLAASLS 361 >gi|258541170|ref|YP_003186603.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-01] gi|256632248|dbj|BAH98223.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-01] gi|256635305|dbj|BAI01274.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-03] gi|256638360|dbj|BAI04322.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-07] gi|256641414|dbj|BAI07369.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-22] gi|256644469|dbj|BAI10417.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-26] gi|256647524|dbj|BAI13465.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-32] gi|256650577|dbj|BAI16511.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653568|dbj|BAI19495.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-12] Length = 323 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/310 (62%), Positives = 242/310 (78%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +MRER L N I ++ ++ + D L+ELA E D ++ E L+ + E + ++ Sbjct: 1 MMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDLAEEAKRRET 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 ESLLSGEADSND YLEV+AGAGGTE+QDW MLLRMYTRWAE +K +E +GE+AG Sbjct: 61 ESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLMESSEGEQAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+L+ GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEIEI+ Sbjct: 121 LKSATILVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ++D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A A MLRA+L Sbjct: 181 DADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRATAMQMLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE ELQKRE A E++KT+IGWG QIRSYVL PYQMVKDLRT +E +P VLDGDLD Sbjct: 241 YEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNPDAVLDGDLD 300 Query: 345 DFMKATLAIK 354 FM A LA++ Sbjct: 301 AFMAAALAMR 310 >gi|296114415|ref|ZP_06833069.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC 23769] gi|295979176|gb|EFG85900.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC 23769] Length = 322 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/309 (62%), Positives = 247/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L N I +++++ + D + L+ELA E D ++ E L+ + E + ++ E Sbjct: 1 MRERTLLANQIEGVQKLEGDVRDTIELVELAEMEGDGDVVAEGVLALRALAEEAKRRETE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K +E +GE+AG+ Sbjct: 61 SLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTLMESSEGEQAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEI+I+E Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A A ML+A++Y Sbjct: 181 ADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMAMLKARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ+RE A E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+P VLDGDLDD Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTNMEKTNPGAVLDGDLDD 300 Query: 346 FMKATLAIK 354 FM A+LA + Sbjct: 301 FMAASLAAQ 309 >gi|260433401|ref|ZP_05787372.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis ITI-1157] gi|260417229|gb|EEX10488.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis ITI-1157] Length = 375 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 198/352 (56%), Positives = 253/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L D++ A RL N + EDP+LW N A+ LMRERQ L +AI + Sbjct: 11 EIQKSLELLAQRMDYETAAHRLEEFNARVEDPNLWDNPENAQKLMRERQVLVDAIETYES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D ++++ + L++++ + K+ E+LL GEAD+ND +LE+ Sbjct: 71 IKTDLKDNVELIELGEMEGDEEVVKDAEEALKKLRDKAAEKELEALLDGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETPGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ +D R+DTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRVDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHIPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAEINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT E + VLDGDL FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTKGVLDGDLGGFMAATLAM 361 >gi|300022372|ref|YP_003754983.1| hypothetical protein Hden_0845 [Hyphomicrobium denitrificans ATCC 51888] gi|299524193|gb|ADJ22662.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC 51888] Length = 377 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/339 (56%), Positives = 253/339 (74%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 DW+ A RL+ LN K EDP+LW + A+ +MR+RQ L+ ++ K +Q D L L+ Sbjct: 23 LDWETAEDRLASLNAKAEDPNLWSDAKNAQKVMRQRQTLERSVEDFKRLQRDYDDALTLI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL E D + + E L+R+ LE + E++LSGEAD Y+EVHAGAGGTESQDW Sbjct: 83 ELGEAESDEASVSEGEAALKRVDLEAHRRSVEAMLSGEADGMSTYVEVHAGAGGTESQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+ML RMY RW E+R +K + ++ GEEAGIKSAT I G NA+GWLK E GVHRLVRI Sbjct: 143 ASMLARMYARWGERRGYKVKLIDESPGEEAGIKSATFEIDGDNAFGWLKTEAGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RRHTSF+S+ VYPV+DD+IE++I+ +D I R+SGAGGQHVN T+SAVR+ Sbjct: 203 SPFDSNARRHTSFASVTVYPVIDDTIEVDINPADVDISFARSSGAGGQHVNRTESAVRLV 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H P+G+V+ Q++RSQH+NK A+ L+A+LYE+EL+KRE AN +++KT+IGWG QIR Sbjct: 263 HKPSGIVIFAQEQRSQHQNKDIAFRRLKARLYEMELKKREAKANAEQAAKTDIGWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVLQPYQ+VKDLRT + T+PS+VLDGD+D F++A L+ Sbjct: 323 SYVLQPYQLVKDLRTGAQSTNPSEVLDGDIDPFIEAALS 361 >gi|83955487|ref|ZP_00964118.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1] gi|83840131|gb|EAP79306.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1] Length = 374 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+S+ L L D + A RL N + EDP+LW + A+ LMR+RQ L ++I+ + Sbjct: 11 KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D ++ E L+++ K+ E+LL+GEAD ND +LE+ Sbjct: 71 IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWAN+L RMY RWAEK+ +K E GEEAGIKSAT I GPNAYGWL Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M A LA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361 >gi|83942252|ref|ZP_00954713.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36] gi|83846345|gb|EAP84221.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36] Length = 374 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+S+ L L D + A RL N + EDP+LW + A+ LMR+RQ L ++I+ + Sbjct: 11 KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D ++ E L+++ K+ E+LL+GEAD ND +LE+ Sbjct: 71 IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWAN+L RMY RWAEK+ +K E GEEAGIKSAT I GPNAYGWL Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M A LA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGAALAL 361 >gi|221639399|ref|YP_002525661.1| peptide chain release factor 2 [Rhodobacter sphaeroides KD131] gi|221160180|gb|ACM01160.1| Bacterial peptide chain release factor 2 [Rhodobacter sphaeroides KD131] Length = 375 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 204/350 (58%), Positives = 244/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S K I Sbjct: 12 IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYKLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E ++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDEEIVTEAEAAIRALVETARAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLA 360 >gi|39935519|ref|NP_947795.1| peptide chain release factor 2 [Rhodopseudomonas palustris CGA009] gi|39649371|emb|CAE27894.1| translation peptide releasing factor RF-2 [Rhodopseudomonas palustris CGA009] Length = 322 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 201/307 (65%), Positives = 250/307 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L DN+ ++EL E D I++E D L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMY RWAEK FK E LE +GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMAATLA 307 >gi|91976917|ref|YP_569576.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB5] gi|91683373|gb|ABE39675.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas palustris BisB5] Length = 322 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 201/307 (65%), Positives = 250/307 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L++A++ I +++ L DN+ ++EL E D ++ E L+ +K EV ++ E Sbjct: 1 MQERTSLEDALTGIGKVERELTDNVEMIELGEAEGDDGVVSEAEAALKALKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK FK E LE +GEEAGI Sbjct: 61 ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEESEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMAATLA 307 >gi|77463535|ref|YP_353039.1| peptide chain release factor 2 [Rhodobacter sphaeroides 2.4.1] gi|332558415|ref|ZP_08412737.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N] gi|77387953|gb|ABA79138.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter sphaeroides 2.4.1] gi|332276127|gb|EGJ21442.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N] Length = 375 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 203/350 (58%), Positives = 245/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S + I Sbjct: 12 IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E +++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETARAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLA 360 >gi|114326944|ref|YP_744101.1| peptide chain release factor 2 [Granulibacter bethesdensis CGDNIH1] gi|114315118|gb|ABI61178.1| bacterial peptide chain release factor 2 (RF-2) [Granulibacter bethesdensis CGDNIH1] Length = 323 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 187/303 (61%), Positives = 238/303 (78%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +MRER L + + + ++ + D L E+A + D ++ + L+ I E + + Sbjct: 1 MMRERTRLASQVEGVLRMESEVSDATELAEMAEADGDEAMATDARRMLETIAAEAKRLEI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 ESLLSGEAD NDAYLE+++GAGGTE+QDWA MLLRMYTRWAE +K +E DGE+AG Sbjct: 61 ESLLSGEADGNDAYLEINSGAGGTEAQDWAEMLLRMYTRWAEAHGYKVTLIEQSDGEQAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSATL + GP+AYGWLK E GVHRLVRISP+DS +RR TSF+SIWVYPVVDD+IEIEI+ Sbjct: 121 IKSATLQVAGPSAYGWLKTEAGVHRLVRISPFDSAARRQTSFASIWVYPVVDDNIEIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E+D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A NML+A+L Sbjct: 181 EADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQTDRSQHRNRATAMNMLKARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE ELQKRE A E++K+EIGWG QIRSYVL PYQ+VKDLRTN+EK +P VLDGDLD Sbjct: 241 YEAELQKREAAAQEQENAKSEIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPGAVLDGDLD 300 Query: 345 DFM 347 +FM Sbjct: 301 EFM 303 >gi|209885116|ref|YP_002288973.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5] gi|209873312|gb|ACI93108.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5] Length = 322 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 203/309 (65%), Positives = 246/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+N + I + L D + L+EL E+D +++ E L +K +V ++ E Sbjct: 1 MQERTSLENQLGGIGRTERELEDQIGLIELGEAENDAAVVAEAEAALAALKKDVARQELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMYTRWAE++ FK E LE GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEFLEETQGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSI ++PVVD+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIKIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + S VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA K Sbjct: 301 FMAATLAQK 309 >gi|126462391|ref|YP_001043505.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17029] gi|126104055|gb|ABN76733.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter sphaeroides ATCC 17029] Length = 375 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 203/350 (58%), Positives = 245/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S + I Sbjct: 12 IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E +++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETAGAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLA 360 >gi|114771120|ref|ZP_01448560.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255] gi|114548402|gb|EAU51288.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255] Length = 375 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 200/353 (56%), Positives = 262/353 (74%), Gaps = 1/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +++ + L L DWD A R+ + +E+P LW N +A+ LMRERQ L ++IS K Sbjct: 10 VEIHKSLELLKQRMDWDTAEHRMEEFDAMSENPDLWNNPEKAQKLMRERQMLSDSISNFK 69 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+ L DN+ L+EL E+D I++E +N+ I+ E ++ E+LL+GE DSND +L+ Sbjct: 70 ELSSNLQDNIELIELGEIEEDEVIIKEAENNILIIQQESAKQELEALLNGEVDSNDTFLQ 129 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGGTES DWANML RMY RWAE++ ++ + +E G+EAGIKS T IKG NAYGW Sbjct: 130 INAGAGGTESCDWANMLARMYVRWAEQKGYQVDRMEESVGDEAGIKSVTYQIKGHNAYGW 189 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 +K E GVHRLVRISP+DSN++RHTSFSS+WVYPVVDD+I+IEI+ S+ R+DTYR+SGAGG Sbjct: 190 MKSESGVHRLVRISPFDSNAKRHTSFSSVWVYPVVDDNIDIEINPSEIRVDTYRSSGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITHIPT +VVQ E+SQH+N+A L+++LYELE++KR E Sbjct: 250 QHVNTTDSAVRITHIPTNIVVQS-SEKSQHQNRANCMAALKSRLYELEMRKRTEGIQEAH 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVL PYQMVKDLRTN+E + VL+GDLD FM ATLA+ Sbjct: 309 DNKGDAGWGNQIRSYVLHPYQMVKDLRTNVETSDSQGVLNGDLDMFMAATLAL 361 >gi|90424348|ref|YP_532718.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB18] gi|90106362|gb|ABD88399.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas palustris BisB18] Length = 322 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 200/307 (65%), Positives = 249/307 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L++++ I +++ L DN+ ++EL E+D ++ E L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLGGIGKVERELTDNVDMIELGEAENDEGVVAEAEAALKALKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK FK E LE GEEAGI Sbjct: 61 ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVD++I+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVVDNTIKIDIAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKNKAQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMGATLA 307 >gi|86136665|ref|ZP_01055244.1| peptide chain release factor 2 [Roseobacter sp. MED193] gi|85827539|gb|EAQ47735.1| peptide chain release factor 2 [Roseobacter sp. MED193] Length = 374 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/352 (55%), Positives = 253/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L +W+ A RL N + EDP+LW + A+ LMRERQ+L +AI K Sbjct: 11 EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDAEAAQKLMRERQNLVDAIDTYKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++ + + L+ +K+ K+ E+LL GEADSND +LE+ Sbjct: 71 IKQDLADNIELIELGEMEEDQEVITDAEEALKALKVSAAEKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEI+++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIDVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 310 NKGDAGWGSQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|56697430|ref|YP_167798.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3] gi|56679167|gb|AAV95833.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3] Length = 375 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 200/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N + EDP+LW N A+ LMRERQ L +A+ K I Sbjct: 12 IQKSLRLLAQRMDQETAQHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL EDD ++++ L+ ++ K+ E+LL GEAD ND +LE++ Sbjct: 72 ETDLADNIELIELGEMEDDQDVIKDAEAALKALRERAAEKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E G+EAGIKSA I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYD+ ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY+ EL +R N + Sbjct: 252 VNTTDSAVRITHIPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVLQPYQMVKDLRT E + VLDG LD FM ATLA+K Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGHETSDTKGVLDGALDGFMAATLAMK 362 >gi|115524982|ref|YP_781893.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisA53] gi|115518929|gb|ABJ06913.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas palustris BisA53] Length = 322 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 201/307 (65%), Positives = 251/307 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L++++ I +++ L DN+ ++EL E D S++ E L+++K +V ++ E Sbjct: 1 MQERTSLEDSLDGIGKVERELDDNVGMIELGEAEGDDSVVAEAEAALKKLKKDVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK FK E LE +GEEAGI Sbjct: 61 ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+ ++PVVD+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSVQIFPVVDNSIKIDIAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ RSQHKNKAQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMAATLA 307 >gi|146277893|ref|YP_001168052.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17025] gi|145556134|gb|ABP70747.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter sphaeroides ATCC 17025] Length = 375 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 201/350 (57%), Positives = 244/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S + I Sbjct: 12 IKRSLELLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E ++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDTEIVTEAEAAIRTLVETARAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI ++ RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANEIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY++EL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQMELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLA 360 >gi|86750123|ref|YP_486619.1| peptide chain release factor 2 [Rhodopseudomonas palustris HaA2] gi|86573151|gb|ABD07708.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas palustris HaA2] Length = 322 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 199/307 (64%), Positives = 250/307 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L DN+ ++EL E D +++E L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELSDNIEMIELGEAEGDEGVVREAEAALKALKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMYTRWAEK FK E LE +GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKVEYLEESEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMAATLA 307 >gi|163747048|ref|ZP_02154404.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45] gi|161379609|gb|EDQ04022.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45] Length = 374 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++S+ L L D D A RL N + EDP+LW N A+ LMRERQ L +AI + Sbjct: 11 QISKSLELLAQRLDVDTAPYRLEEFNARVEDPNLWDNPDAAQKLMRERQSLVDAIDTYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D +++E L+ + K+ E+LL+GEADSND +LE+ Sbjct: 71 IKQELADNVELIELGEMEGDEEVIKEAEVALKSLAATAAQKELEALLNGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ +K + GEEAGIKSAT I+G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVDLQAESAGEEAGIKSATYKIEGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M ATLA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGATLAL 361 >gi|209964906|ref|YP_002297821.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW] gi|209958372|gb|ACI99008.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW] Length = 319 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 194/307 (63%), Positives = 244/307 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRE+ L+NA++ +E++ L D+L L+ELA E D ++ + + +K + E Sbjct: 1 MREKTQLENALTGTRELERDLRDSLELIELAEAEGDAEMVADAEKTIAALKERAAKMELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND +LEV++GAGGTESQDWA MLLRMYTRWAE+ +K + L+ GEEAGI Sbjct: 61 SLLSGEADANDCFLEVNSGAGGTESQDWALMLLRMYTRWAEQHGYKVDELDETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ IKG N YGWLK E GVHRLVRISP+DS +RRHTSF+S+ V PV+DD I +EI+E Sbjct: 121 KSATIQIKGHNGYGWLKTESGVHRLVRISPFDSQARRHTSFASVSVTPVIDDRIVVEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D ++DTYR+SGAGGQHVN TDSAVR+TH+PTG+VV CQQERSQHKN+A+AW+MLRA++Y Sbjct: 181 KDVKVDTYRSSGAGGQHVNKTDSAVRLTHLPTGIVVACQQERSQHKNRAKAWDMLRARIY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A E++KTEIGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD Sbjct: 241 EMELRKREEAAAALEATKTEIGWGHQIRSYVLQPYQMVKDLRTGVETSDSGGVLDGDLDR 300 Query: 346 FMKATLA 352 F++A LA Sbjct: 301 FLQAALA 307 >gi|119384552|ref|YP_915608.1| peptide chain release factor 2 [Paracoccus denitrificans PD1222] gi|119374319|gb|ABL69912.1| bacterial peptide chain release factor 2 (bRF-2) [Paracoccus denitrificans PD1222] Length = 402 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 199/351 (56%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L LG DW+ A RL LN E +W + A+ LMR+RQ L +A+ + I Sbjct: 39 IRKSLKLLGQRMDWETAPHRLEELNAMIEAGDIWSDQARAQKLMRDRQMLSDAVETYRRI 98 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN L+EL E D I+ + L+ + K+ E+LL+GEAD ND +LE++ Sbjct: 99 ESELKDNAELIELGEAEGDDEIVADAEAALKSLAELAAQKELEALLNGEADGNDTFLEIN 158 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ + E L GEEAGI+SA I GPNAYGWLK Sbjct: 159 AGAGGTESADWASMLARMYVRWAEKKGYSVELLSETPGEEAGIRSAAYKISGPNAYGWLK 218 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI I +++ RIDTYR+SGAGGQH Sbjct: 219 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEITIPDNEIRIDTYRSSGAGGQH 278 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV E+SQH+N+A A L+A+LY+LEL KR N + Sbjct: 279 VNTTDSAVRITHLPTGIVV-TSSEKSQHQNRANAMAALKARLYQLELDKRNAAINAQHEA 337 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVL PYQMVKDLRT E + VLDG LD FM ATLA+ Sbjct: 338 KGDAGWGNQIRSYVLHPYQMVKDLRTGHETSDTQGVLDGALDAFMAATLAL 388 >gi|288957379|ref|YP_003447720.1| peptide chain release factor RF-2 [Azospirillum sp. B510] gi|288909687|dbj|BAI71176.1| peptide chain release factor RF-2 [Azospirillum sp. B510] Length = 322 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 191/307 (62%), Positives = 241/307 (78%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER LD +++ + ++ L D+L L+E+ E+D +++ + L ++ Q E Sbjct: 1 MRERTQLDTSVAGYRALERDLSDSLELIEMGEMEEDATVVADAEAQLYGLRDRANKLQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND ++EV+AGAGGTE+QDWA ML+RMYTRWAE+ +KTE L+ GEEAGI Sbjct: 61 SLLSGEADANDCFVEVNAGAGGTEAQDWALMLMRMYTRWAEQHGYKTEWLDETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ IKG NAYGWLK E GVHRLVRISP+DS +RR TSF+++ + PV+DD I+IEI+E Sbjct: 121 KSATVQIKGHNAYGWLKTEAGVHRLVRISPFDSQARRQTSFAAVSISPVIDDKIDIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 DCRIDTYRASGAGGQH+N TDSAVRITHIPT +VV CQQERSQHKN+A+AW+MLRA+LY Sbjct: 181 KDCRIDTYRASGAGGQHINKTDSAVRITHIPTNIVVSCQQERSQHKNRAKAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+ RE+ A E++KT+IGWG QIRSYVL PYQMVKDLRT +E + VLDG LD Sbjct: 241 ERELKIREDAAAALEATKTDIGWGHQIRSYVLHPYQMVKDLRTEVETSQSQAVLDGALDP 300 Query: 346 FMKATLA 352 F++A LA Sbjct: 301 FLEAALA 307 >gi|149202750|ref|ZP_01879722.1| peptide chain release factor 2 [Roseovarius sp. TM1035] gi|149144032|gb|EDM32066.1| peptide chain release factor 2 [Roseovarius sp. TM1035] Length = 375 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 199/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L W+ A RL N + EDP LW + A+ LMRERQ L +A+ Sbjct: 11 EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQTLMRERQALVDALETHDG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I++ L DNL L+EL E D ++ E ++ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKNELEDNLGLIELGEAESDAEVVGEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEKR + E G+EAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGDEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV Q +SQH+N+ A L+++LY+LEL +R N Sbjct: 251 HVNTTDSAVRITHMPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHD 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD+FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361 >gi|85702878|ref|ZP_01033982.1| peptide chain release factor 2 [Roseovarius sp. 217] gi|85671806|gb|EAQ26663.1| peptide chain release factor 2 [Roseovarius sp. 217] Length = 375 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 199/352 (56%), Positives = 247/352 (70%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L W+ A RL N + EDP LW + A+ LMRERQ L +A+ Sbjct: 11 EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQSLMRERQALVDALDTHDS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L DNL L+EL E+D ++ E ++ + K+ E+LL GEADSND +LE+ Sbjct: 71 LKQELEDNLGLIELGEMENDTEVVSEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEKR + E GEEAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV Q +SQH+N+ A L+++LY+ EL +R N Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQQELDRRNAAINEAHD 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD+FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361 >gi|126726324|ref|ZP_01742165.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150] gi|126704187|gb|EBA03279.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150] Length = 375 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 198/351 (56%), Positives = 250/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ L L D++ RL N TEDP+LW + +A+ LMR+RQ L +A + ++ Sbjct: 12 INKSLALLRQRMDFETVPHRLEEFNALTEDPNLWNDPEKAQKLMRDRQLLLDAYNNYNKL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD ++ E L+ + K+ E+LL+GEADSND +LE++ Sbjct: 72 AQDLADNVELIELGEMEDDEDVVAEAEAGLRSVVEIAAKKELEALLNGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWANML RMY RWAE R +K E GEEAGIKSA I G NAYGWLK Sbjct: 132 SGAGGTESCDWANMLARMYVRWAEARGYKVELQSETAGEEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSFSSIWVYPVVDD+I+IE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFSSIWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N + Sbjct: 252 VNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAL 361 >gi|148260683|ref|YP_001234810.1| peptide chain release factor 2 [Acidiphilium cryptum JF-5] gi|326403877|ref|YP_004283959.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301] gi|146402364|gb|ABQ30891.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium cryptum JF-5] gi|325050739|dbj|BAJ81077.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301] Length = 323 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/308 (62%), Positives = 239/308 (77%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 ++RER L + I+ D L L ELA E D S+L E L+RI E + ++ Sbjct: 1 MLRERNRLATQTEAVHTIERETEDALTLAELAEAEGDQSVLAEAEAALRRISEEAKRREI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 ESLL+GEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K LE +GE+AG Sbjct: 61 ESLLAGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMLEESEGEQAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ + G NAYGWLK E GVHRLVRISP+D+N+RR TSF+S+WVYPVVDDSIE+EI+ Sbjct: 121 IKSATIQVSGMNAYGWLKTEAGVHRLVRISPFDANARRQTSFASVWVYPVVDDSIEVEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A ML+++L Sbjct: 181 PADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQNDRSQHRNRATAMEMLKSRL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE+ELQKREE A ES+K +IGWG QIRSYVL PYQ+VKDLRTN E +P VL+GDLD Sbjct: 241 YEMELQKREEAAAASESAKRDIGWGHQIRSYVLAPYQLVKDLRTNFESGNPDAVLNGDLD 300 Query: 345 DFMKATLA 352 FM A+LA Sbjct: 301 AFMAASLA 308 >gi|84515548|ref|ZP_01002910.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53] gi|84510831|gb|EAQ07286.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53] Length = 374 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 193/351 (54%), Positives = 248/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LN L D++ A RL + + EDP LW + A+ LMR+RQ L + ++ I Sbjct: 12 IQKSLNLLAQRMDYETARYRLEEFDARVEDPTLWDDPDAAQKLMRDRQVLVDTLTMHDTI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+E+ E D I+ E + L+ ++ + K+ E+LL GEAD+ND +LEV+ Sbjct: 72 KQELADNIELIEMGEMEGDADIITEAEEALKSLREKAAQKELEALLDGEADANDTFLEVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWANML RMY RWAEK+ +K E + G+EAGIKS T I G NAYGWLK Sbjct: 132 AGAGGTESCDWANMLSRMYVRWAEKKGYKVELQSMQSGDEAGIKSVTYKIMGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRLDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N + Sbjct: 252 VNTTDSAVRITHFPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD M ATLA+ Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTGFETSDTKGVLDGDLDGLMGATLAL 361 >gi|27379419|ref|NP_770948.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110] gi|27352570|dbj|BAC49573.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110] Length = 322 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 199/307 (64%), Positives = 247/307 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L++++S I +++ L D++ ++EL E D ++ E L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDDGVVAEAEAALKALKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D+YLEVHAGAGGTESQDWA MLLRMYTRWAE FK E LE +GEEAGI Sbjct: 61 ALLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEYLEESEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ V+PV+DDSI+I+I E Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVIDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + S VL+G+LDD Sbjct: 241 EMELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGELDD 300 Query: 346 FMKATLA 352 FM ATLA Sbjct: 301 FMAATLA 307 >gi|162147177|ref|YP_001601638.1| peptide chain release factor 2 [Gluconacetobacter diazotrophicus PAl 5] gi|161785754|emb|CAP55325.1| Peptide chain release factor 2 [Gluconacetobacter diazotrophicus PAl 5] Length = 322 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/302 (61%), Positives = 242/302 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L + ++ ++ + D L L+ELA E D ++L++ L+ + E + ++ E Sbjct: 1 MRERTLLAGQVEGVQRLEADVRDTLDLVELAEMEGDDAVLKDAVQMLRALAEEAKRRETE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEADSND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K +E +GE+AG+ Sbjct: 61 SLLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVALMESSEGEQAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEIEI+E Sbjct: 121 KSATIQVTGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D ++DT+RASGAGGQHVN T+SA+RITHIPTG++V CQ +RSQH+N+A A ML+A++Y Sbjct: 181 ADLKVDTFRASGAGGQHVNKTESAIRITHIPTGIIVACQTDRSQHRNRATAMTMLKARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ+RE A E++KT+IGWG QIRSYVL PYQ+VKDLRT++E+ +P VLDGDLDD Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTSVERGNPDAVLDGDLDD 300 Query: 346 FM 347 FM Sbjct: 301 FM 302 >gi|254454841|ref|ZP_05068278.1| peptide chain release factor 2 [Octadecabacter antarcticus 238] gi|198269247|gb|EDY93517.1| peptide chain release factor 2 [Octadecabacter antarcticus 238] Length = 375 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 192/352 (54%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L+ L +WD A RL N + EDP LW + A+ LMR+RQ L +AI+ + Sbjct: 11 EIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPDAAQKLMRDRQSLVDAIASYEA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D++ L+E+ EDD ++ E D L+ + + K+ E+LL+GEAD+ND +LE+ Sbjct: 71 IRQELSDHVELIEMGEMEDDAGVVTEAEDGLKVLAAKAAEKELEALLNGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTE+ DWA ML RMY RWAE++ +K E GEE GIKSA+ I G NAYGWL Sbjct: 131 NSGAGGTEACDWAAMLARMYVRWAERKGYKVELQSESAGEEVGIKSASYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++E+ KR + N Sbjct: 251 HVNTTDSAVRITHAPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQIEMDKRSALVNEVHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAM 361 >gi|159043721|ref|YP_001532515.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12] gi|157911481|gb|ABV92914.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12] Length = 375 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 192/350 (54%), Positives = 245/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L+ L D++ A RL + EDP+LW + A+ LMR+RQ L +A+ + I Sbjct: 12 IRKSLDLLAQRLDYETAPHRLEEFDAMIEDPNLWNDQARAQKLMRDRQMLVDAMKTYEGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL E D ++ + + L+ + K+ E+LL GEAD ND +LE++ Sbjct: 72 KQELEDNIELIELGEMEADAEVVTDAEEALKSLAETAAKKEIEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA+ML RMY RWAE + + E GEEAGIKSA I GPNAYGWLK Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAKGYTVELQSQSPGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+V E+SQH+N+ A L+++LY++EL +R N + Sbjct: 252 VNTTDSAVRITHVPTGIVT-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K + GWG QIRSYVLQPYQMVKDLRT E + + VLDGDLD M ATLA Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTAGVLDGDLDGLMSATLA 360 >gi|149914781|ref|ZP_01903311.1| LexA repressor [Roseobacter sp. AzwK-3b] gi|149811574|gb|EDM71409.1| LexA repressor [Roseobacter sp. AzwK-3b] Length = 375 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 193/347 (55%), Positives = 246/347 (70%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L W+ A RL N + EDP LW + +A+ LMR+RQ L +AI+ IQ + Sbjct: 16 LELLRQRMGWETARHRLEEFNARVEDPQLWDDPAKAQKLMRDRQGLVDAITTHDTIQQEM 75 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 DN+ L+EL E D ++ E ++ + + K+ E+LL+GEAD+NDA+LE+HAGAG Sbjct: 76 QDNVELIELGEMEGDPDVVAEAEAAIKALARKAAQKELEALLNGEADANDAFLEIHAGAG 135 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA+ML RMY RWAE+ + E GEEAGIKS T + G NAYGWLK E G Sbjct: 136 GTESCDWASMLARMYVRWAEQHGYTVELQSETAGEEAGIKSVTYKVTGHNAYGWLKSESG 195 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ +D RIDT+R+SGAGGQHVN T Sbjct: 196 VHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTFRSSGAGGQHVNKT 255 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R E +K + Sbjct: 256 DSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNEAIAEAHDAKGDA 314 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVLQPYQMVKDLRT++E + VLDGDLD FM ATLA+ Sbjct: 315 GWGNQIRSYVLQPYQMVKDLRTSVETSDTKGVLDGDLDQFMAATLAM 361 >gi|84684982|ref|ZP_01012882.1| peptide chain release factor 2 [Maritimibacter alkaliphilus HTCC2654] gi|84667317|gb|EAQ13787.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2654] Length = 375 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 198/351 (56%), Positives = 246/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L W+ A RL LN TEDP LW + A+ LMRERQ L + K + Sbjct: 12 IEKSLALLRQRIGWETAEHRLEELNAMTEDPELWNDPDRAQKLMRERQSLVAQMDGYKAM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D++ L+EL EDD ++++ L+ +K + E+LL+GEAD ND +LEVH Sbjct: 72 EQEKNDSVELIELGEMEDDDEVVKDAEAALKALKERAAAAEIEALLNGEADPNDTFLEVH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA+ML RMY RWAE +K E GEEAGIKSAT I G NAYGWLK Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAHGYKVELQSTTPGEEAGIKSATYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IE+E++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEVEVAPNDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY++EL +R + N + Sbjct: 252 VNTTDSAVRITHIPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNQAINEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD M ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTQGVLDGDLDGLMAATLAM 361 >gi|255264706|ref|ZP_05344048.1| peptide chain release factor 2 [Thalassiobium sp. R2A62] gi|255107041|gb|EET49715.1| peptide chain release factor 2 [Thalassiobium sp. R2A62] Length = 375 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 195/350 (55%), Positives = 244/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D++ A RL N + EDP LW + A+ LMR+RQ L +AI + I Sbjct: 12 IEKSLVLLAQRLDYETAPYRLEEFNARVEDPTLWDDPEAAQKLMRDRQALVDAIKTYETI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD ++ E L +K K+ E+LL GEAD+ND +LE++ Sbjct: 72 SQELADNVELIELGEMEDDADVVTEAETALATLKDAAAQKELEALLDGEADANDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK +K E G+EAGIKSA+ I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKAGYKVELQSESAGDEAGIKSASYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N + Sbjct: 252 VNTTDSAVRITHAPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD M ATLA Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTKGVLDGDLDGLMAATLA 360 >gi|154248590|ref|YP_001419548.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2] gi|154162675|gb|ABS69891.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2] Length = 322 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 189/307 (61%), Positives = 239/307 (77%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L++ + I + L DN+ L+EL E D ++ E S +L +K E+ ++ E Sbjct: 1 MQERTTLEDGLGAIDRVLRDLDDNIELIELGEAEGDEGVITEASASLDGLKAELARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEADSND+YLEVHAGAGGT+SQDWA MLLRMY RW E+ FK E ++ GE+AG+ Sbjct: 61 ALLSGEADSNDSYLEVHAGAGGTDSQDWAEMLLRMYRRWCERHGFKVELMDESQGEQAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ +KG NAYGWLK E GVHRLVRISP+DSN+RR TSF+S+ VYPVVDD I ++I E Sbjct: 121 KSATIQVKGHNAYGWLKTEAGVHRLVRISPFDSNARRQTSFASVDVYPVVDDRIVVDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R+DT R+ GAGGQHVN T+SAVR+THIPTG+ V + +RSQHKN+A AWNMLRAKLY Sbjct: 181 ADVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVSEGDRSQHKNRATAWNMLRAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +LEL+KRE A +++KT+IGWG QIRSYVLQPYQ+VKDLRT + +P +VLDGDLD Sbjct: 241 DLELKKREAEAAAEQAAKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDP 300 Query: 346 FMKATLA 352 FM+A LA Sbjct: 301 FMQAALA 307 >gi|294677084|ref|YP_003577699.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003] gi|294475904|gb|ADE85292.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003] Length = 375 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 199/351 (56%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N E LW + A+ LMRERQ L + + + I Sbjct: 12 VRKTLRLLAQRMDLETAPHRLEEFNAMIEHGDLWSDPARAQKLMRERQMLMDKLETYRRI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD I+ E +L+ +K K+ E+LL GEAD ND +LE++ Sbjct: 72 DRDLTDNIELIELGEMEDDPEIVAEAEKSLRALKELAAAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMYTRWAEK+ + E G+EAGI+S I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYTRWAEKKGYTVELQSETAGDEAGIRSVAYKISGQNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR VRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I SD RIDTYR+SGAGGQH Sbjct: 192 SESGVHRQVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPASDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N LRA+LY++EL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALRARLYQMELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K E GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGHETSDTQGVLDGDLDAFMAATLAM 361 >gi|254487153|ref|ZP_05100358.1| peptide chain release factor 2 [Roseobacter sp. GAI101] gi|214044022|gb|EEB84660.1| peptide chain release factor 2 [Roseobacter sp. GAI101] Length = 374 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 196/352 (55%), Positives = 250/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++S+ L L + + A RL N + EDP+LW + A+ LMRERQ L ++I+ + Sbjct: 11 QISKSLELLAQRLNVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRERQALVDSIATYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D++ L+E+ E+D ++ E L+ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKQELADHVELIEMGEMENDAEVVAEAEAALKALAETAAQKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWAN+L RMY RWAEK+ +K E GEEAGIKSAT I G NAYGWL Sbjct: 131 NAGAGGTESCDWANILARMYVRWAEKKGYKVELQSESAGEEAGIKSATYKISGLNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M A LA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361 >gi|256821963|ref|YP_003145926.1| peptide chain release factor 2 [Kangiella koreensis DSM 16069] gi|256795502|gb|ACV26158.1| bacterial peptide chain release factor 2 (bRF- 2) [Kangiella koreensis DSM 16069] Length = 365 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/349 (53%), Positives = 259/349 (74%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S ++ L G D+D+ +RL + + E P +W + A+ L +ER L+ ++ IK++ Sbjct: 14 MSERVTTLRGYLDFDSKQERLVEVERELEQPDVWNDQERAQSLGQERAKLETVVNTIKDL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + DN LLEL++EEDD + E + ++++ +E +F + SGE D N+AYL++ Sbjct: 74 EAGIDDNQELLELSVEEDDAESVAEIENEVKQLNTSLEKLEFRRMFSGEMDENNAYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA++LLRMY RW E R FK E E DG+ AGIKSAT+ ++G AYGWL+ Sbjct: 134 AGSGGTEAQDWASILLRMYLRWCESRGFKAEVTEESDGDVAGIKSATIRVEGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++VYP VDDSI+IE++ +D R+DTYRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIDIEVNPADLRVDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+R+THIPTG+VVQCQ +RSQHKN+AQA +M++AKLYELE+QK+ E E + Sbjct: 254 VNKTDSAIRLTHIPTGIVVQCQNDRSQHKNRAQAMSMMKAKLYELEMQKQREEQQALEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT E ++ + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDQSR-IKDLRTGHESSNTTAVLDGDLDSFIEASL 361 >gi|126739118|ref|ZP_01754812.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6] gi|126719735|gb|EBA16443.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6] Length = 374 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 196/352 (55%), Positives = 252/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L +W+ A RL N + EDP+LW + A+ LMRERQ L +A+ K Sbjct: 11 EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQTLVDAMDTYKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++ + + L+ ++ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKQDLADNIELIELGEMEEDEEVVADAEEALKALQQKAAEKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 251 HVNTTDSAVRITHNPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 310 SAGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|157803496|ref|YP_001492045.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel] gi|157784759|gb|ABV73260.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel] Length = 350 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 187/342 (54%), Positives = 247/342 (72%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 GLFD A +RL L T +P LW + + A+ L+RE+ L+ ++ + +++ L D L Sbjct: 3 GLFDIKTATKRLKELAELTTNPDLWNDQVNAQTLLREKSTLEEKLNTLNKLKSNLKDTLE 62 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L LA E+D L + +L+ + + + E L SGEAD N+ +LE++AGAGGTES Sbjct: 63 LEALAETENDLETLAQVKQDLKNLSIIAAKFETEYLFSGEADCNNCFLEINAGAGGTESH 122 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHRLV Sbjct: 123 DWASIMMRMYLRFAERLDFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLV 182 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVR Sbjct: 183 RISPFNAAGKRMTSFASSWVYPEIDDNISITIDDKDLRIDTFRASGAGGQHVNTTDSAVR 242 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG Q Sbjct: 243 ITHIPTGTVTQCQSDRSQHKNKAQAMRMLKAKLYELEMQKRTDNINEQNAAKTDNSWGHQ 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSY+LQPYQMVKDLRT+ E + VLDG+L++F+ A+LA+ Sbjct: 303 IRSYILQPYQMVKDLRTDYETSDTRGVLDGNLEEFVSASLAM 344 >gi|255020528|ref|ZP_05292592.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC 51756] gi|254970048|gb|EET27546.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC 51756] Length = 349 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 184/343 (53%), Positives = 250/343 (72%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD RL + ++EDP LW++ A+ L RER L+ + ++E+ +L D Sbjct: 4 VLGGIFDLPGKAARLEEVQLESEDPKLWEDPERAQALERERTQLEAVVRPLQELDQKLRD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + ++ELA+ E D ++L+ + +L+ + VE +F+ + SG D DA++++ AGAGGT Sbjct: 64 SAEMVELAVAEQDEALLEAVAGDLEAARATVEKLEFQRMFSGPQDGADAFVDIQAGAGGT 123 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWANMLLRMY W E R F TE +E+ +GE AGIKSA+L ++G +A+GWL+ E GVH Sbjct: 124 EAQDWANMLLRMYLHWCEARGFSTELVEVSEGEVAGIKSASLHVRGDHAFGWLRTETGVH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS +RRHTSF+S++VYP +DDS EIEI+ +D ++DTYRASGAGGQHVN TDS Sbjct: 184 RLVRKSPFDSGNRRHTSFASVFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDS 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+THIPTG+VV CQ +RSQHKN+A+A MLR+KLYELE+QKR E +K++IGW Sbjct: 244 AVRLTHIPTGIVVACQTDRSQHKNRAEAMRMLRSKLYELEMQKRNAEKQALEDTKSDIGW 303 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL + +KDLRT +E VLDGDLD F++A L Sbjct: 304 GHQIRSYVLDQSR-IKDLRTGVEVGDTQRVLDGDLDGFVEAAL 345 >gi|114764683|ref|ZP_01443868.1| peptide chain release factor 2 [Pelagibaca bermudensis HTCC2601] gi|114542883|gb|EAU45904.1| peptide chain release factor 2 [Roseovarius sp. HTCC2601] Length = 373 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 192/353 (54%), Positives = 245/353 (69%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ LG DW+ A RL N + EDP+LW + A+ LMR+RQ L +A+ Sbjct: 11 KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQFLVDAMETYTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++ E L+ + + K+ E+LL GEAD ND +LE+ Sbjct: 71 IKQELSDNVELIELGEMEEDDEVVSEAEGALKALAEKAGQKELEALLDGEADGNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTE+ DWA ML RMY RWAEKR ++ E G EAGIKS I G NAYGWL Sbjct: 131 NAGAGGTEACDWAAMLQRMYVRWAEKRGYEVELQSEEAGAEAGIKSVAYKISGTNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+ + R TSF+S+WVYPVVDD+IEI+++ SD R+DTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFGKGT-RETSFASVWVYPVVDDNIEIDVNPSDIRVDTYRSSGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 250 HVNTTDSAVRITHMPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNAEINAQHE 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA K Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQK 361 >gi|99080709|ref|YP_612863.1| peptide chain release factor 2 [Ruegeria sp. TM1040] gi|122984362|sp|Q1GIB5|RF2_SILST RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|99036989|gb|ABF63601.1| bacterial peptide chain release factor 2 (bRF-2) [Ruegeria sp. TM1040] Length = 374 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 245/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L+ L +W+ A RL N + EDP+LW + A+ LMR+RQ L +A+ K I Sbjct: 12 IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAMDTYKSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D++ L+EL E+D ++++ D L+ +K + K+ E+LL GE D NDA+LE+ Sbjct: 72 RQDLQDSVELIELGEMEEDAEVVKDAEDTLKALKEKAAQKELEALLDGETDPNDAFLEIK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+ML RMY RWAE R F E E G EAGIKSAT IKG NAYGWLK Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVELQEEQAGAEAGIKSATYQIKGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+ + R TSF+++ YPV+DD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGTHRLVRISPFGKGT-RETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 251 VNTTDSAVRITHEPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYV+QPYQMVKDLRTN E VLDGDLD FM ATLA+K Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361 >gi|220934633|ref|YP_002513532.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7] gi|219995943|gb|ACL72545.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7] Length = 364 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/349 (53%), Positives = 249/349 (71%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L G D+D +RL ++ + EDP++W N +A+ L RER L+ + I + Sbjct: 13 LQGRVDALRGYLDYDAKRERLEEVSRELEDPNVWNNPEKAQELGRERSRLEEVVLLISRM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL++A EEDD + +L + +V +F + SGE D N+AY+++ Sbjct: 73 DKALGDTRDLLDMAAEEDDAETVSAVEADLANYENDVAQLEFRRMFSGEMDENNAYMDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWANMLLRMY RW E+R FKTE +E+ +GE AGIKSAT+ +GP AYGWL+ Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWGERRGFKTELMEVSEGEVAGIKSATIKFEGPYAYGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF++++V P VDDSIEIEI+ +D R+DTYRASGAGGQH Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFAAVFVSPEVDDSIEIEINPADLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH+P+GVVV CQ +RSQHKN+ A L+AKLYELELQK+ E + Sbjct: 253 VNRTESAIRITHMPSGVVVACQADRSQHKNRDTAMKQLKAKLYELELQKQNAAKQALEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 KSDIGWGSQIRSYVLDQSR-IKDLRTGVEVGNTQAVLDGDLDQFIEASL 360 >gi|317051343|ref|YP_004112459.1| peptide chain release factor 2 [Desulfurispirillum indicum S5] gi|316946427|gb|ADU65903.1| Peptide chain release factor 2 [Desulfurispirillum indicum S5] Length = 367 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 195/331 (58%), Positives = 246/331 (74%), Gaps = 2/331 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +RL+ L EDP LW + +A+ ++RE + L +A++ EI RL +++ +L +ED Sbjct: 30 ERLAELVPMIEDPTLWNDPQQAQGILREDKMLKDALADFNEIH-RLLEDVKVLHEFCQED 88 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + ++ E + NL +++ V + LLS E D ++AYL ++AGAGGTESQDW +ML+RM Sbjct: 89 ESNV-DELTQNLAKLEKLVADYELTVLLSDEHDPSNAYLTINAGAGGTESQDWGSMLMRM 147 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTRWAEKRKFK +E +GEEAGIKS TL I+G AYG LK E GVHRLVRISP+DSN+ Sbjct: 148 YTRWAEKRKFKVTIMEYQEGEEAGIKSVTLFIEGLYAYGNLKSETGVHRLVRISPFDSNA 207 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S++V P +DDSIE++I ESD RIDTYR+SGAGGQHVNTTDSAVRITH PTGVV Sbjct: 208 RRHTSFTSVFVSPEIDDSIEVDIRESDLRIDTYRSSGAGGQHVNTTDSAVRITHTPTGVV 267 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 QCQ ERSQH+NK QA MLRAKLYELEL+K+ + E SK +I WG QIRSYVL PY Sbjct: 268 TQCQSERSQHQNKEQAMKMLRAKLYELELEKKRQGLREVEDSKMDIAWGSQIRSYVLHPY 327 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +MVKDLRT E + VLDG LD+F+KA L Sbjct: 328 KMVKDLRTRHETGNAEAVLDGALDEFIKAYL 358 >gi|310815685|ref|YP_003963649.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25] gi|308754420|gb|ADO42349.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25] Length = 375 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 193/351 (54%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + + D + A RL N + EDP LW N A+ LMR+RQ L + IS + + Sbjct: 12 IEKSITLVAQRMDRETASYRLEEFNARVEDPTLWDNPEAAQKLMRDRQVLLDKISNVDAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+E+ E D ++ E L+ ++ K+ E+LL GEAD ND +LE++ Sbjct: 72 ERDLRDNIELIEMGEAEGDDDVVAEAEAALRALRDVAGKKEIEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA++L RMY RWAEK+ + E GEEAGIKS + I G NAYGWLK Sbjct: 132 SGAGGTESCDWASILARMYVRWAEKKGYTVEMQSESPGEEAGIKSVSYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE+ + D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVQDKDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV Q +SQH+N+ A L+++LY++EL +R N S Sbjct: 252 VNTTDSAVRITHLPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQIELDRRNAAINEAHES 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 311 KGSAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDGFMAATLAM 361 >gi|254461473|ref|ZP_05074889.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2083] gi|206678062|gb|EDZ42549.1| peptide chain release factor 2 [Rhodobacteraceae bacterium HTCC2083] Length = 375 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/352 (55%), Positives = 246/352 (69%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L DWD A RL N + EDP LW + A+ LM+ERQ L +A+ Sbjct: 11 EIEKSLELLRQRLDWDTAEFRLEEFNARVEDPDLWNDPDAAQKLMQERQALVDAMGTYTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D + ++EL E+D ++ E + L + K+ E+LL GEADSND +LE+ Sbjct: 71 IKQELSDQVEMIELGEMEEDEDVVTEAEEALNALAKLAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEKR +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKRGYKVELQSESAGEEAGIKSAAYKISGQNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 251 HVNTTDSAVRITHAPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMGATLAM 361 >gi|308198348|ref|YP_003933612.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1] gi|307752087|gb|ADN93061.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1] Length = 364 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 187/349 (53%), Positives = 251/349 (71%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + G D+D RL +N + EDP++W N A+ L RER L + + ++ Sbjct: 13 LSERTQTIRGYLDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D+ LL++A+EEDD + + ++ ++R++ +E +F + SGE D N+AYL++ Sbjct: 73 TSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWANMLLRMY RWA+K F +E+ +GE AGIK AT+ IKG A+GWL+ Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQH Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E S Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDS 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT IE++ VLDGDLD++++A+L Sbjct: 313 KSDIGWGHQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLDEYLEASL 360 >gi|126735602|ref|ZP_01751347.1| peptide chain release factor 2 [Roseobacter sp. CCS2] gi|126714789|gb|EBA11655.1| peptide chain release factor 2 [Roseobacter sp. CCS2] Length = 374 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 194/351 (55%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N + EDP LW + A+ LMRERQ L +A+ I Sbjct: 12 IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPEAAQKLMRERQLLVDAMGNYDSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E+D ++ E L ++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 NQELSDNIELIELGEMEEDAEVVAEAEAALVKLADKAAKKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWANML RMY RWAEK+ +K E G+EAGIKSA+ I G NAYGWLK Sbjct: 132 AGAGGTESCDWANMLARMYVRWAEKKGYKVELQAEQSGDEAGIKSASYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRLDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N + Sbjct: 252 VNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAIKALKSRLYQMELDKRSTLVNEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M ATLA+ Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMAATLAM 361 >gi|329889563|ref|ZP_08267906.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568] gi|328844864|gb|EGF94428.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568] Length = 300 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 182/289 (62%), Positives = 220/289 (76%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D ++L ++A EE D + L++ + L+ IK + E+LLSGEAD NDAYLE+++GA Sbjct: 5 LEDGIMLADMADEEGDEATLEDAREQLKAIKERAARAELEALLSGEADGNDAYLEINSGA 64 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTES DWA ML+RMY+RWA ++ GE+AGIKSATL I GPNAYGWLK E Sbjct: 65 GGTESNDWAGMLMRMYSRWARAHGYEVTIEAEEQGEQAGIKSATLQIAGPNAYGWLKSES 124 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISPYD+ ++RHTSF+SI V PVVDD+IEI+I+ +D R DTYRASGAGGQH+N Sbjct: 125 GVHRLVRISPYDAAAKRHTSFASIGVSPVVDDTIEIDINPADVRTDTYRASGAGGQHINK 184 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+TH+PT VV CQ RSQH+N+ QAW MLRA+LYELELQKRE A +KT+ Sbjct: 185 TDSAVRLTHVPTNTVVACQAGRSQHQNREQAWKMLRARLYELELQKREAAAQALADAKTD 244 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM A LA + Sbjct: 245 IGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDPFMGAALAAR 293 >gi|325578209|ref|ZP_08148344.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC 33392] gi|325159945|gb|EGC72074.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC 33392] Length = 364 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 183/345 (53%), Positives = 249/345 (72%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L C GG+FD+D V+RL +N + E P +W + +A+ L +ER L+ + IK ++ L Sbjct: 17 LLCFGGIFDFDAKVERLEEVNAELEQPDVWNDPEKAQALGKERVSLEQVVDTIKNLEQGL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E +D E L ++ ++ +F + SGE D+ D Y+++ AG+G Sbjct: 77 EDVEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G Sbjct: 137 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSF++++VYP +DD+I+IEI+ +D RID YRASGAGGQHVN T Sbjct: 197 IHRLVRKSPFDSNNRRHTSFAAVFVYPEIDDNIDIEINPADLRIDVYRASGAGGQHVNKT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++I Sbjct: 257 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 316 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 317 GWGSQIRSYVLDDAR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 360 >gi|259419215|ref|ZP_05743132.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B] gi|259345437|gb|EEW57291.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B] Length = 374 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 190/352 (53%), Positives = 245/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L+ L +W+ A RL N + EDP+LW + A+ LMR+RQ L +AI K I Sbjct: 12 IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAIDTYKGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D++ L+EL E+D ++++ + L+ +K + K+ E+LL GE D NDA+LE+ Sbjct: 72 RQDLDDSVELIELGEMEEDDEVVKDAEETLKALKEKAAQKELEALLDGETDPNDAFLEIK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+ML RMY RWAE R F + E G EAGIKSAT IKG NAYGWLK Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVDLQEEQAGAEAGIKSATYQIKGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+ + R TSF+++ YPV+DD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGTHRLVRISPFGKGT-RETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 251 VNTTDSAVRITHEPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYV+QPYQMVKDLRTN E VLDGDLD FM ATLA+K Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361 >gi|254491393|ref|ZP_05104572.1| peptide chain release factor 2 [Methylophaga thiooxidans DMS010] gi|224462871|gb|EEF79141.1| peptide chain release factor 2 [Methylophaga thiooxydans DMS010] Length = 348 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/345 (53%), Positives = 250/345 (72%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D+ ++L + + E P +W + A+ L +ER L+ ++ + +D L Sbjct: 1 MTISGGIFDYDDKAEQLVEVTRELESPSVWDDPDRAQKLGQERASLEKIVTTLSSHRDTL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EE+D + +L ++ +E +F+ + SG+ D N AY+++ +G+G Sbjct: 61 EDAKDLLELAVEENDQETFDAITADLDELEKGLEKLEFQRMFSGKLDKNSAYIDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWAN+LLRMY RW E + +K E +E+ GE AGIKSAT+ ++G A+G L+ E G Sbjct: 121 GTEAQDWANILLRMYLRWGESQDYKVELMEVSAGEVAGIKSATIRMEGEYAFGMLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+SI+VYP VDD+IEI+I+ +D R+DTYRASGAGGQHVNTT Sbjct: 181 VHRLVRKSPFDSGARRHTSFASIFVYPEVDDTIEIDINPADLRVDTYRASGAGGQHVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSA+RITH PT +VVQCQ ERSQHKNK QA N LRAKLYELELQK+ E+ E SK++I Sbjct: 241 DSAIRITHEPTNIVVQCQNERSQHKNKDQAMNQLRAKLYELELQKQNEVKQAAEESKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 GWGSQIRSYVLDQSR-IKDLRTGVETGNTQAVLDGDLDQFIEASL 344 >gi|332288942|ref|YP_004419794.1| peptide chain release factor 2 [Gallibacterium anatis UMN179] gi|330431838|gb|AEC16897.1| peptide chain release factor 2 [Gallibacterium anatis UMN179] Length = 351 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 184/342 (53%), Positives = 248/342 (72%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+DN V+RL ++ + E P +W + +A+ L +ER L+ ++ IK +Q L D Sbjct: 7 LGGIFDFDNKVERLEEVSAELEQPDVWNDPEKAQALGKERSSLEAVVNTIKSLQQGLDDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E DD + E L +++ + +F + SG D+ D Y+++ AG+GGTE Sbjct: 67 DGLLELAIEADDQATFDEAVAELDQLEQSLAKLEFRRMFSGANDAADCYVDLQAGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW MLLRMY RWAE + FK E +E+ DG+ AGIKSAT+ + G A+GWL+ E G+HR Sbjct: 127 AQDWTEMLLRMYLRWAESKGFKAELMEVSDGDVAGIKSATIRVSGEYAFGWLRTETGIHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+RRHTSFS+++VYP ++D I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 187 LVRKSPFDSNNRRHTSFSAVFVYPEINDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQHKNK QA L+AKLYELEL+K+ E SK++IGWG Sbjct: 247 VRITHMPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELKKKNAEKQALEESKSDIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 307 SQIRSYVLDDAR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 347 >gi|91205413|ref|YP_537768.1| peptide chain release factor 2 [Rickettsia bellii RML369-C] gi|122425715|sp|Q1RIY5|RF2_RICBR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|91068957|gb|ABE04679.1| Peptide chain release factor RF-2 [Rickettsia bellii RML369-C] Length = 368 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 192/352 (54%), Positives = 250/352 (71%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D + + RL+ L P LW + A+ L+RE+ +L+ + + Sbjct: 11 KIEQSLELLRRSLDVETSAARLAELEELAASPDLWNDQANAQKLLREKSNLEEQLGAYNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D L L E+A E+D I+Q+ +LQ + + E L SGEADSN+ +LE+ Sbjct: 71 IRSNLKDALELEEMAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGWL Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPYQMVKDLRT+ E + VLDGDL++F+ A+LA+ Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 362 >gi|93005664|ref|YP_580101.1| peptide chain release factor 2 [Psychrobacter cryohalolentis K5] gi|92393342|gb|ABE74617.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter cryohalolentis K5] Length = 349 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 186/341 (54%), Positives = 242/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E+P LW + A + +E+ LD I + ++ L D Sbjct: 6 GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LELA+E +D S+L + L + V +F + SGE D N+ YL++ +G+GGTE+ Sbjct: 66 AMLELAVEAEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE FK E +E+ G AGIKSAT+ IKG A+GWL+ E GVHRL Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVEVIEVSSGSVAGIKSATIEIKGNYAFGWLRTEIGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAV Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+GVVV CQ ERSQH NKA A MLRAKLYELE+QKR E E K+++GWG Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 QIRSYVLDDSR-IKDLRTGVETFNTGAVLDGDLDQFIEASL 345 >gi|84502908|ref|ZP_01001021.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597] gi|84388891|gb|EAQ01761.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597] Length = 374 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 190/351 (54%), Positives = 242/351 (68%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L +W+ A RL N + EDP+LW + +A+ LM++RQ L ++I+ I Sbjct: 12 IEKSLELLRQRMNWETAQHRLEEFNARVEDPNLWDDPEKAQALMKDRQALVDSIAVHDSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN L+EL EDD ++ E L+ +K K+ E+LL+GEADSND +LE++ Sbjct: 72 RQELSDNAELIELGEMEDDQEVVAEAETALRALKERAAEKELEALLNGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY RWAEKR +K E G EAGIKS I G NAYGWLK Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEPGAEAGIKSCAYKITGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+ + R TSF+S+WVYPVVDD+I+I+++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFGKGT-RETSFASVWVYPVVDDNIDIDVNPADIRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 251 VNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHEN 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K GWG QIRSYVLQPYQMVKDLRT E + VLDG+LD FM ATLA+ Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTEHETSDTQGVLDGNLDGFMAATLAM 360 >gi|152985089|ref|YP_001346821.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7] gi|150960247|gb|ABR82272.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7] Length = 382 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/342 (53%), Positives = 247/342 (72%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL +N + EDP++W N A+ L RER L + + ++ L D+ Sbjct: 38 FGGIFDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADS 97 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL++A+EE D + + + ++R++ +E +F + SGE D N+AYL++ AG+GGTE Sbjct: 98 RDLLDMAVEEGDEGAVGDVAGEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTE 157 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY RWA+K F +E+ +GE AGIK AT+ +KG A+GWL+ E GVHR Sbjct: 158 AQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHVKGEYAFGWLRTEIGVHR 217 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSA Sbjct: 218 LVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSA 277 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VV CQ ERSQH NK A MLRAKLYE E+QKR + E +K++IGWG Sbjct: 278 VRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYEQEMQKRTAASQALEDTKSDIGWG 337 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT IE++ VLDGDLD++++A+L Sbjct: 338 HQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLDEYLEASL 378 >gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1] gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1] Length = 373 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/353 (51%), Positives = 244/353 (69%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + G FD D +RLS + + P W + +A+ L ER HL+ + K Sbjct: 14 KLKEKYAEIRGYFDLDKMKRRLSEIEEEMASPDFWNDPKKAQSLSVERNHLEQELEAFKS 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D+ +L+E+A EE D S+L E L + ++ + + +LSGE D N+A + + Sbjct: 74 VEQKIEDSEVLIEMAEEEQDGSLLDEAEQMLSDLDKTLDRLEVKKVLSGEFDKNNAIVTI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA ML+RMY RWAE++ F+ E L++ + EEAGIKSATLLIKGP AYG+L Sbjct: 134 HAGAGGTESCDWAQMLMRMYIRWAERKGFEVEILDLQENEEAGIKSATLLIKGPYAYGFL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E G HRLVRISP+D+N+RRHTSF + V P +D+ IE+EI E D RIDTYRASGAGGQ Sbjct: 194 RAEHGTHRLVRISPFDANARRHTSFCGVIVVPEIDEDIEVEIKEEDLRIDTYRASGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITHIPTG+VV CQ ERSQ +N+ +A +L+A+LYELE QKREE Sbjct: 254 HVNKTDSAVRITHIPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAQARG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSY+ QPY++VKD RT +E ++ V+DGD+D F++A L K Sbjct: 314 EHKSIAWGNQIRSYIFQPYRLVKDHRTGVETSNIDAVMDGDIDLFIEAYLKQK 366 >gi|254437327|ref|ZP_05050821.1| peptide chain release factor 2 [Octadecabacter antarcticus 307] gi|198252773|gb|EDY77087.1| peptide chain release factor 2 [Octadecabacter antarcticus 307] Length = 375 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 192/353 (54%), Positives = 252/353 (71%), Gaps = 1/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +++ + L+ L +WD A RL N + EDP LW + A+ LMR+RQ L +AI+ + Sbjct: 10 VEIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPEAAQKLMRDRQSLVDAIASYE 69 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 I+ L D++ L+E+ EDD I+ E + L+ + + K+ E+LL+GEAD+ND +LE Sbjct: 70 VIKQELSDHIELIEMGEMEDDSDIVTEAEEALKVLAAKAAKKELEALLNGEADANDTFLE 129 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +++GAGGTE+ DWA ML RMY RWAE++ +K + GEE GIKSA+ I G NAYGW Sbjct: 130 INSGAGGTEACDWAAMLARMYIRWAERKGYKVDLQSESAGEEVGIKSASYKISGHNAYGW 189 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGG Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 250 QHVNTTDSAVRITHAPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVH 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 309 ENAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAM 361 >gi|71065379|ref|YP_264106.1| peptide chain release factor 2 [Psychrobacter arcticus 273-4] gi|71038364|gb|AAZ18672.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter arcticus 273-4] Length = 349 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 185/341 (54%), Positives = 243/341 (71%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E+P LW + A + +E+ LD I + ++ L D Sbjct: 6 GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LELA+EE+D S+L + L + V +F + SGE D N+ YL++ +G+GGTE+ Sbjct: 66 AMLELAVEEEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE FK + +E+ G AGIKSAT+ IKG A+GWL+ E GVHRL Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVDVIEVSAGGVAGIKSATIEIKGDYAFGWLRTEIGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+ RHTSF++++V P +DD+IEI+++ +D RIDTYR+SGAGGQHVNTTDSAV Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDVNPADLRIDTYRSSGAGGQHVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+GVVV CQ ERSQH NKA A MLRAKLYELE+QKR E E K+++GWG Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 QIRSYVLDDSR-IKDLRTGVETFNTGAVLDGDLDQFIEASL 345 >gi|170733471|ref|YP_001765418.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3] gi|169816713|gb|ACA91296.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3] Length = 391 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 180/342 (52%), Positives = 251/342 (73%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L D Sbjct: 47 FGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 106 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L L ELA EE D L + D+ +++ V +F + S AD N+ ++++ AGAGGTE Sbjct: 107 LDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 166 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+HR Sbjct: 167 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHR 226 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 227 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 286 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + ESSKT++GWG Sbjct: 287 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG 346 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 347 HQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387 >gi|107028703|ref|YP_625798.1| peptide chain release factor 2 [Burkholderia cenocepacia AU 1054] gi|116690138|ref|YP_835761.1| peptide chain release factor 2 [Burkholderia cenocepacia HI2424] gi|105897867|gb|ABF80825.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia cenocepacia AU 1054] gi|116648227|gb|ABK08868.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia cenocepacia HI2424] Length = 391 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 180/342 (52%), Positives = 251/342 (73%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L D Sbjct: 47 FGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 106 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L L ELA EE D L + D+ +++ V +F + S AD N+ ++++ AGAGGTE Sbjct: 107 LDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 166 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+HR Sbjct: 167 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHR 226 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 227 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 286 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + ESSKT++GWG Sbjct: 287 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG 346 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 347 HQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387 >gi|326575346|gb|EGE25274.1| peptide chain release factor 2 [Moraxella catarrhalis CO72] Length = 349 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 185/342 (54%), Positives = 245/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD ++ +RL +N + E+P +W N A + +E+ LD + I + +L D Sbjct: 5 FGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLDDA 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +LELA+E+DD S+L + L VE +F + SGE D+N+ YL++ +G+GGTE Sbjct: 65 AAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMY RW E FK E LE+ +G AGIKSAT+++KG A+GWL+ E GVHR Sbjct: 125 AQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+ RHTSF++++V P +DD+I I+I+ +D RIDTYR+SGAGGQHVNTTDSA Sbjct: 185 LVRKSPFDSNNGRHTSFAAVFVSPEIDDNIGIDINPADLRIDTYRSSGAGGQHVNTTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH PTGVVV CQ ERSQH NK A MLRAKLYELE+QKR E E SK++IGWG Sbjct: 245 VRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E ++ + VL+GDLD F++A+L Sbjct: 305 SQIRSYVLDDSR-IKDLRTGVETSNTTAVLNGDLDKFIEASL 345 >gi|327481446|gb|AEA84756.1| peptide chain release factor 2 [Pseudomonas stutzeri DSM 4166] Length = 370 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 185/342 (54%), Positives = 244/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL +N + EDP++W A+ L RER L + I ++ L D+ Sbjct: 26 FGGIFDYDQKHDRLVEVNRELEDPNVWNKPEYAQSLGRERATLAQIVETIDDLTGSLADS 85 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLE+A EE+D + + ++R++ +E +F + S E D N+ YL++ AG+GGTE Sbjct: 86 RDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGGTE 145 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWAN+LLRMY RWA+KR F E +E+ +GE AGIK AT+ IKG A+GWL+ E GVHR Sbjct: 146 AQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHR 205 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSA Sbjct: 206 LVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSA 265 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E SK++IGWG Sbjct: 266 VRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWG 325 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E++ VLDGDLD +++A+L Sbjct: 326 HQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDGYLEASL 366 >gi|114569849|ref|YP_756529.1| peptide chain release factor 2 [Maricaulis maris MCS10] gi|114340311|gb|ABI65591.1| bacterial peptide chain release factor 2 (bRF-2) [Maricaulis maris MCS10] Length = 321 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 190/313 (60%), Positives = 238/313 (76%), Gaps = 4/313 (1%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L+ AI+ + E + D+L ++ELA EDD +++E L + + Q E Sbjct: 1 MRERNRLEAAITTVVEAEQEYSDSLEIIELAEMEDDAEMVEEAVAGLNALAERMRRAQLE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD NDA++E+H+GAGGTESQDWA ML RMY+RWA +K E +E GEEAG+ Sbjct: 61 TLLSGEADGNDAFVEIHSGAGGTESQDWAAMLARMYSRWANAHGYKVETMEEQAGEEAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T+L+KG NAYGWLK E GVHRLVRISP+DS++RRHTSFSS+ VYP +DD+I+++I Sbjct: 121 KSTTILVKGENAYGWLKTEAGVHRLVRISPFDSSARRHTSFSSVGVYPQIDDAIDVDIDV 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG----VVVQCQQERSQHKNKAQAWNMLR 281 S R DTYRASGAGGQH+N TDSAVR+T+ G VVVQCQ +RSQHKN++QAW+MLR Sbjct: 181 SKVRTDTYRASGAGGQHINKTDSAVRLTYDMPGEEKPVVVQCQNDRSQHKNRSQAWDMLR 240 Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 A++YE+ELQ+RE A SK+EIGWG QIRSYVLQPYQMVKDLRTN+E ++ VLDG Sbjct: 241 ARVYEIELQRREAAAQAEADSKSEIGWGHQIRSYVLQPYQMVKDLRTNVETSNTGGVLDG 300 Query: 342 DLDDFMKATLAIK 354 DLDDFM A LA + Sbjct: 301 DLDDFMAAALAAR 313 >gi|89068846|ref|ZP_01156229.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516] gi|89045616|gb|EAR51679.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516] Length = 374 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 193/351 (54%), Positives = 237/351 (67%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N + EDP LW + A+ LMRERQ L ++I I Sbjct: 12 IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPAAAQKLMRERQALVDSIETYDGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD ++ E L +K K+ E+LL GEAD ND +LE++ Sbjct: 72 ARELADNVELIELGEMEDDSEVVAEAEAALAALKERAAQKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY RWAEKR +K E G EAGIKS + I GPNAYGWLK Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEAGTEAGIKSVSYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+ + R TSF+S+WVYPVVDD+IEIEI+ S+ R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFGKGT-RETSFASVWVYPVVDDNIEIEINPSEIRLDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV E+SQH+N+ A L+++LY++EL +R N + Sbjct: 251 VNTTDSAVRITHLPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHEA 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K GWG QIRSYVLQPYQMVKDLRT E + VLDG LD FM ATLA+ Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTGHETSDTGGVLDGALDGFMAATLAM 360 >gi|115352205|ref|YP_774044.1| peptide chain release factor 2 [Burkholderia ambifaria AMMD] gi|115282193|gb|ABI87710.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia ambifaria AMMD] Length = 406 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 179/342 (52%), Positives = 251/342 (73%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L D Sbjct: 62 FGGIFDYDAKSARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 121 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L L ELA EE D L + D+ ++++ V +F + S AD N+ ++++ AGAGGTE Sbjct: 122 LDLFELAREEGDEDTLVASEDDAKKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 181 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+HR Sbjct: 182 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHR 241 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ +D RIDTYRASGAGGQH+N TDSA Sbjct: 242 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASGAGGQHINKTDSA 301 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + ESSKT++GWG Sbjct: 302 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWG 361 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 362 HQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 402 >gi|67459393|ref|YP_247017.1| peptide chain release factor 2 [Rickettsia felis URRWXCal2] gi|75536187|sp|Q4UKS1|RF2_RICFE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|67004926|gb|AAY61852.1| Peptide chain release factor RF-2 [Rickettsia felis URRWXCal2] Length = 368 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 188/352 (53%), Positives = 250/352 (71%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D +++ +RL+ L T DP LW + A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLELLWRSLDVESSTERLNELEELTSDPSLWNDQANAQTLLREKSNLEEKLNAFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L L E+A E+D L + +L+ + + + E L SGEAD N+ +LE+ Sbjct: 71 LKSNLKDTLELEEMAEAENDLETLSQIEQDLKNLSVIAAKFETECLFSGEADGNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DW ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWVSIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPT V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPYQMVKDLRT+ E + VLDGDL+DF+ A+LA+ Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEDFVSASLAM 362 >gi|229586524|ref|YP_002845025.1| peptide chain release factor 2 [Rickettsia africae ESF-5] gi|259585246|sp|C3PMX2|RF2_RICAE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|228021574|gb|ACP53282.1| Peptide chain release factor RF-2 [Rickettsia africae ESF-5] Length = 368 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 188/352 (53%), Positives = 249/352 (70%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D + + +RL+ L T DP LW + A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L L E+A E+D L + +L+ + + + E L SGEAD N+ +LE+ Sbjct: 71 LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPY MVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 311 TKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 362 >gi|226328243|ref|ZP_03803761.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198] gi|225202976|gb|EEG85330.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198] Length = 347 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 186/341 (54%), Positives = 241/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ L D Sbjct: 4 GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLDQGLEDVS 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E DD E L + ++E +F + SGE DS D YL++ AG+GGTE+ Sbjct: 64 GLLELAVEADDEETFNEAIAELDVLNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML+RMY RWAE R FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRL Sbjct: 124 QDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS ++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 184 VRKSPFDSGGRRHTSFSSAFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E +K++IGWG Sbjct: 244 RITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 QIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 343 >gi|71733798|ref|YP_276012.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554351|gb|AAZ33562.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. phaseolicola 1448A] Length = 368 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 249/349 (71%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + G D+D+ RL+ +N + EDP++W N A+ L RER L + + E+ Sbjct: 17 LSERSETIRGYLDYDHKHDRLTEVNRELEDPNVWNNPTYAQELGRERSLLAQIVETLDEM 76 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ Sbjct: 77 SSGLADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQ 136 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ Sbjct: 137 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 196 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQH Sbjct: 197 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQH 256 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E + Sbjct: 257 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDT 316 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 317 KSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 364 >gi|78066892|ref|YP_369661.1| peptide chain release factor 2 [Burkholderia sp. 383] gi|77967637|gb|ABB09017.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia sp. 383] Length = 391 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 179/342 (52%), Positives = 250/342 (73%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L D Sbjct: 47 FGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 106 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L L ELA EE D L + ++ ++ V +F + S AD N+ ++++ AGAGGTE Sbjct: 107 LDLFELAREEGDEDTLVASEEDAAKLASRVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 166 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+HR Sbjct: 167 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVSGEYAYGFLRTETGIHR 226 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 227 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 286 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + ESSKT++GWG Sbjct: 287 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG 346 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 347 HQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387 >gi|83718832|ref|YP_442414.1| peptide chain release factor 2 [Burkholderia thailandensis E264] gi|83652657|gb|ABC36720.1| peptide chain release factor 2, programmed [Burkholderia thailandensis E264] Length = 459 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/349 (51%), Positives = 252/349 (72%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G D+D +RL+ +N + EDP++W + A+ L RE++ L+ ++ + E+ Sbjct: 108 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLEGVVTTLTEL 167 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA EE+D L T + +++ V +F + S AD N+ ++++ Sbjct: 168 DNDLRDAQDLFDLAREENDEDTLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 227 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 228 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGDYAYGYLR 287 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 288 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 347 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 348 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 407 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 408 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASL 455 >gi|312959346|ref|ZP_07773863.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6] gi|311286063|gb|EFQ64627.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6] Length = 430 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/342 (53%), Positives = 243/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL+ +N + EDP +W A+ L RER L + + E+ L D Sbjct: 86 FGGIFDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDELNTGLADC 145 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL++A+EEDD + + L R++ + +F + S E D N+AYL++ AG+GGTE Sbjct: 146 RDLLDMAVEEDDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGGTE 205 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ E GVHR Sbjct: 206 AQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHR 265 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSA Sbjct: 266 LVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSA 325 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VV CQ ERSQH NK A MLRAKLYE E+QKR + E +K++IGWG Sbjct: 326 VRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWG 385 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTNIE++ VLDGD+D++++A+L Sbjct: 386 HQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLEASL 426 >gi|146308390|ref|YP_001188855.1| peptide chain release factor 2 [Pseudomonas mendocina ymp] gi|145576591|gb|ABP86123.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas mendocina ymp] Length = 378 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/342 (53%), Positives = 243/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D+ RL +N + ED +W A+ L RER L + I ++ L D+ Sbjct: 34 FGGIFDYDHKHDRLVEVNRELEDASVWNKPEYAQALGRERAMLAQIVETIDDLTGSLADS 93 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLE+A EE+D + + ++R++ +E +F + SGE D N+ YL++ AG+GGTE Sbjct: 94 RDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGEMDPNNCYLDIQAGSGGTE 153 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ IKG A+GWL+ E GVHR Sbjct: 154 AQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHR 213 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSA Sbjct: 214 LVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSA 273 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E SK++IGWG Sbjct: 274 VRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWG 333 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E++ VLDGDLD +++A+L Sbjct: 334 HQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDGYLEASL 374 >gi|15892291|ref|NP_360005.1| peptide chain release factor 2 [Rickettsia conorii str. Malish 7] gi|24638155|sp|Q92IQ2|RF2_RICCN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|15619432|gb|AAL02906.1| peptide chain release factor RF-2 [Rickettsia conorii str. Malish 7] Length = 368 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 188/352 (53%), Positives = 249/352 (70%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D + + +RL+ L T DP LW + A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L L E+A E+D L + +L+ + + + E L SGEAD N+ +LE+ Sbjct: 71 LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPY MVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 311 AKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSAHLAM 362 >gi|254456112|ref|ZP_05069541.1| peptide chain release factor 2 [Candidatus Pelagibacter sp. HTCC7211] gi|207083114|gb|EDZ60540.1| peptide chain release factor 2 [Candidatus Pelagibacter sp. HTCC7211] Length = 326 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 175/320 (54%), Positives = 243/320 (75%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 + + WQ+ +K +++E++ ++ ++ K ++L D + ELA EE++ ++ +E N Sbjct: 3 EANFWQDKNNSKNIIKEKKLYEDLLNIHKASIEKLIDLNDISELAAEEENQAVQKEILQN 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ ++ V+ + + LS E DS D Y+E+HAGAGGTESQDWA ML RMY +WA+++ FK Sbjct: 63 IKDLRDLVKTNEIKCFLSNETDSLDCYIEIHAGAGGTESQDWAEMLRRMYLKWADQKNFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + + H G+EAGIKS+T+ I+G +GWLK E G+HRLVRISP+DS +RRHTSF+SIWV Sbjct: 123 SNLISEHKGDEAGIKSSTIKIEGDYVFGWLKKESGIHRLVRISPFDSGARRHTSFASIWV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YPVVD++I IEI E D RIDTYR+SGAGGQHVNTTDSAVRITHIP+ +VVQCQ ERSQHK Sbjct: 183 YPVVDENINIEIIEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPSKIVVQCQNERSQHK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK NML+A+LY+ E++K+E+ E+SK+EIGWG QIRSYVLQPY++VKD RTN E Sbjct: 243 NKETCINMLKARLYDYEIKKKEQKNQNTENSKSEIGWGHQIRSYVLQPYRLVKDNRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 T+P +LDG++D F++ +L Sbjct: 303 STNPDKILDGEIDGFLEQSL 322 >gi|255320321|ref|ZP_05361506.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82] gi|255302760|gb|EET81992.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82] Length = 351 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/341 (52%), Positives = 243/341 (71%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL + + EDP +W + A+ + +E+ L+N I+ ++ + +L D Sbjct: 8 GGIFDYDLKKERLEEVLRELEDPSIWNDQSRAQAMAKEKGELENVINVLEGLSTQLEDAQ 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+LA+E DD S+L + L + + +F + S D N Y+E+ AG+GGTE+ Sbjct: 68 AMLDLAVEADDESLLADVQAELSSAEEALAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+MLLRMY RW E+ FK E +E DG+ AGIKSAT+ ++G AYGWL+ E GVHRL Sbjct: 128 QDWASMLLRMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSFS+++V P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAV Sbjct: 188 VRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PTG+VV CQ +RSQH N+ AW LRAKLYELE+ KR E A E SK++IGWG Sbjct: 248 RLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGS 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 308 QIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLDKFIEASL 347 >gi|254191408|ref|ZP_04897912.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur 52237] gi|157939080|gb|EDO94750.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur 52237] Length = 367 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/349 (51%), Positives = 252/349 (72%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G D+D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 363 >gi|313672869|ref|YP_004050980.1| bacterial peptide chain release factor 2 (brf-2) [Calditerrivibrio nitroreducens DSM 19672] gi|312939625|gb|ADR18817.1| bacterial peptide chain release factor 2 (bRF-2) [Calditerrivibrio nitroreducens DSM 19672] Length = 371 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/334 (55%), Positives = 246/334 (73%), Gaps = 3/334 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++LS + +T DP W + E+K L++E+ + + + R D +LLEL +E+ Sbjct: 31 EKLSNIEKQTHDPDFWSSK-ESKHLLKEQSSIKKFLDDWYYLVRRFEDMDVLLEL--QEE 87 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 ++ E +N +K V + + +L+GE D N+A L +H+GAGGTE+ DWANMLLRM Sbjct: 88 GENVAAEIEENFTELKQIVNDFELKLILNGENDINNAILTIHSGAGGTEANDWANMLLRM 147 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE RKFK E L+ G+EAGIKSATL I GP AYG+LKGE GVHRLVR+SP+D+N+ Sbjct: 148 YIRWAENRKFKYEMLDYQAGDEAGIKSATLNIIGPYAYGYLKGETGVHRLVRLSPFDANN 207 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S++V P ++D ++I I+ESD +IDT+RA GAGGQHVNTTDSAVRITH+PTG+V Sbjct: 208 KRHTSFASVFVLPEIEDDVDIVINESDLKIDTFRAGGAGGQHVNTTDSAVRITHLPTGIV 267 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V CQ ERSQHKNKA A +L++KLYELE++K+ + N ESSKTEI +G QIRSYVL PY Sbjct: 268 VSCQNERSQHKNKAHALKILKSKLYELEMEKKNKEKNELESSKTEINFGSQIRSYVLHPY 327 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +MVKDLRT E +P VLDG+LDDF+++ L K Sbjct: 328 KMVKDLRTRHETGNPDAVLDGELDDFIRSYLFYK 361 >gi|197285860|ref|YP_002151732.1| peptide chain release factor 2 [Proteus mirabilis HI4320] gi|238693208|sp|B4F0M7|RF2_PROMH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|194683347|emb|CAR44054.1| peptide chain release factor 2 [Proteus mirabilis HI4320] Length = 365 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 185/350 (52%), Positives = 246/350 (70%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++ + L G D+D +RL +N + E P +W +A+ L +ER L+ + I + Sbjct: 13 EVAERTQVLRGYLDYDAKKERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAIVETIDQ 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LL+LA+E DD E L+ + ++E +F + SGE DS D YL++ Sbjct: 73 LEQGLEDVSGLLDLAVEADDEETFNEAVAELEGLNKKLEQLEFRRMFSGEYDSADCYLDL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E DG+ AG+KSAT+ I G AYGWL Sbjct: 133 QAGSGGTEAQDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E Sbjct: 253 HVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 NKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|116051698|ref|YP_789463.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa UCBPP-PA14] gi|115586919|gb|ABJ12934.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa UCBPP-PA14] Length = 332 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/326 (55%), Positives = 241/326 (73%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N + EDP++W N A+ L RER L + + ++ L D+ LL++A+EEDD + Sbjct: 4 VNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMAVEEDDEGAV 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + ++ ++R++ +E +F + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RWA Sbjct: 64 DDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 +K F +E+ +GE AGIK AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTS Sbjct: 124 DKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ Sbjct: 184 FTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQN 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH NK A MLRAKLYELE+QKR + E SK++IGWG QIRSYVL + +KD Sbjct: 244 ERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDSKSDIGWGHQIRSYVLDQSR-IKD 302 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT IE++ VLDGDLD++++A+L Sbjct: 303 LRTGIERSDCDKVLDGDLDEYLEASL 328 >gi|71083436|ref|YP_266155.1| peptide chain release factor 2 [Candidatus Pelagibacter ubique HTCC1062] gi|71062549|gb|AAZ21552.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus Pelagibacter ubique HTCC1062] Length = 284 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 172/278 (61%), Positives = 224/278 (80%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELALEE + S++ E ++++ +K + + + LS E DS D Y+E+HAGAGGTESQDW Sbjct: 3 ELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLDCYIEIHAGAGGTESQDW 62 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY +W++ + FK+E + H GEEAGIKS+T+ I+G +GWLK E G+HRLVRI Sbjct: 63 AEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLVRI 122 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS +RRHTSF+SIW+YPVVD++IEIEI+E D RIDTYR+SGAGGQHVNTTDSAVRIT Sbjct: 123 SPFDSGARRHTSFASIWIYPVVDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAVRIT 182 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+P+ +VVQCQ ERSQHKNK NML+A+LY+ EL+K+E+ + ESSK+EIGWG QIR Sbjct: 183 HLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGHQIR 242 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL PY+MVKD RTN E ++P VLDG++DDF++++L Sbjct: 243 SYVLHPYRMVKDNRTNFESSNPDKVLDGEIDDFLESSL 280 >gi|262373739|ref|ZP_06067017.1| peptide chain release factor 2 [Acinetobacter junii SH205] gi|262311492|gb|EEY92578.1| peptide chain release factor 2 [Acinetobacter junii SH205] Length = 351 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 177/341 (51%), Positives = 241/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL + + EDP +W + A+ + +E+ L+N + + ++L D Sbjct: 8 GGIFDYDLKAERLEEVLRELEDPAIWNDQSRAQAIAKEKGSLENTLGVFDRLAEQLDDAK 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+LA+E DD S+L++ L + + +F + S D N +LE+ +G+GGTE+ Sbjct: 68 AMLDLAVEADDESLLEDVQAELDSAEQALGNLEFRRMFSNPMDPNPCFLEIQSGSGGTEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIKSAT+ + G AYGWL+ E GVHRL Sbjct: 128 QDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAYGWLRTESGVHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+ RHTSFS+++V P +DD+IEI+I+ SD R DTYRASGAGGQH+N TDSAV Sbjct: 188 VRKSPFDSNNNRHTSFSAVFVSPEIDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+VV CQ +RSQH N+ AW LRAKLYELE+ KR E A E SK++IGWG Sbjct: 248 RLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGS 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 308 QIRSYVLDDSR-IKDLRTGVENSNTKAVLDGDLDKFIEASL 347 >gi|53719890|ref|YP_108876.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243] gi|53723794|ref|YP_103319.1| peptide chain release factor 2 [Burkholderia mallei ATCC 23344] gi|226830773|ref|YP_001066897.2| peptide chain release factor 2, programmed [Burkholderia pseudomallei 1106a] gi|254200276|ref|ZP_04906642.1| peptide chain release factor 2 [Burkholderia mallei FMH] gi|254209352|ref|ZP_04915698.1| peptide chain release factor 2 [Burkholderia mallei JHU] gi|81604734|sp|Q62J00|RF2_BURMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|81607820|sp|Q63SP0|RF2_BURPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229576668|sp|A3NX26|RF2_BURP0 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|52210304|emb|CAH36283.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243] gi|52427217|gb|AAU47810.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei ATCC 23344] gi|147749872|gb|EDK56946.1| peptide chain release factor 2 [Burkholderia mallei FMH] gi|147750125|gb|EDK57196.1| peptide chain release factor 2 [Burkholderia mallei JHU] gi|213385360|gb|ABN92528.3| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1106a] Length = 367 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/349 (51%), Positives = 252/349 (72%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G D+D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 363 >gi|85712973|ref|ZP_01044012.1| Protein chain release factor B [Idiomarina baltica OS145] gi|85693211|gb|EAQ31170.1| Protein chain release factor B [Idiomarina baltica OS145] Length = 348 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/345 (53%), Positives = 245/345 (71%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + LGG+FD+ + +RL + + E P +W + +A+ L +ER L+ I + ++ L Sbjct: 1 MRHLGGIFDYAHKKERLEEVTRELEQPEVWDDPPKAQSLGKERAALEQVIETLDNLEQGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L++LA+E +D + E L+ + ++E +F + S + DS+D Y+++ +G+G Sbjct: 61 EDIEGLVDLAVEAEDETTFDEAEQELKELLTQLEALEFRRMFSRDNDSSDCYVDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWANMLLRMY RWAE +FKTE E+ +GE AGIKSAT+ I G AYGWL+ E G Sbjct: 121 GTEAQDWANMLLRMYLRWAEAHEFKTEITELSEGEVAGIKSATVRIAGEYAYGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+S+++YP VDD IEIEI+ SD RIDTYRASGAGGQHVN T Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFIYPEVDDDIEIEINPSDLRIDTYRASGAGGQHVNRT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH PTG+VVQCQ +RSQHKNK A L+AKLYELE+QK+ E E SK +I Sbjct: 241 DSAVRITHEPTGIVVQCQSDRSQHKNKDSAMKQLKAKLYELEIQKQNEDKQALEDSKADI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT IE + VLDG LD F++A+L Sbjct: 301 GWGSQIRSYVLDDAR-IKDLRTGIENRNTQAVLDGALDPFIEASL 344 >gi|312947424|gb|ADR28251.1| peptide chain release factor 2 [Escherichia coli O83:H1 str. NRG 857C] Length = 357 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/342 (54%), Positives = 238/342 (69%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL +N + E P +W A+ L +ER L+ + + +++ L D Sbjct: 13 LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDV 72 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE Sbjct: 73 SGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 132 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHR Sbjct: 133 AQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHR 192 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 193 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 252 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 253 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG 312 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 313 SQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 353 >gi|126667155|ref|ZP_01738129.1| peptide chain release factor 2 [Marinobacter sp. ELB17] gi|126628311|gb|EAZ98934.1| peptide chain release factor 2 [Marinobacter sp. ELB17] Length = 351 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/343 (53%), Positives = 245/343 (71%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL+ + + E P +W++ A+ L +ER L+ +S I + L D Sbjct: 8 GGIFDYDQRSERLTEVERELEMPSVWEDPERAQSLGKERSDLELIVSTIDRLTSGLTDAE 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLE+A+EEDD + + + ++L + +E +F + SGE D N+AYL++ AG+GGTE+ Sbjct: 68 GLLEMAVEEDDEATVADIGNDLAEMDANLEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW NMLLRMY RWAE+R FK E +E+ +GE AGIKSATL I+G A+GWL+ E GVHRL Sbjct: 128 QDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAGIKSATLHIQGDYAFGWLRTETGVHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSFSS++V P VDDS IEI+ +D R+D YRASGAGGQHVN T+SAV Sbjct: 188 VRKSPFDSGNRRHTSFSSVFVAPEVDDSFVIEINPADLRVDVYRASGAGGQHVNRTESAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+VV CQ RSQH+NK QA L+AKL+E E+Q R E SK++IGWG Sbjct: 248 RLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEHEMQARNAEKQKLEDSKSDIGWGS 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL + +KDLRT +E ++ VLDGD+D F++A+L + Sbjct: 308 QIRSYVLDDSR-IKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349 >gi|187924547|ref|YP_001896189.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN] gi|187715741|gb|ACD16965.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN] Length = 417 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/341 (52%), Positives = 249/341 (73%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D+ RL +N + EDP +W + A+ L RE++ LD+ + + + + L D Sbjct: 74 GGIFDYDDKALRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLRDAQ 133 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ++A EEDD L + Q I+ V +F + + AD N+A+L++ AGAGGTE+ Sbjct: 134 DLFDMAREEDDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEA 193 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GVHRL Sbjct: 194 CDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRL 253 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 254 VRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAV 313 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIP+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+E + E+ KT++GWG Sbjct: 314 RITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWGH 373 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 374 QIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASL 413 >gi|297580789|ref|ZP_06942715.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae RC385] gi|297535205|gb|EFH74040.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae RC385] Length = 344 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 184/342 (53%), Positives = 246/342 (71%), Gaps = 3/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ DR D++ Sbjct: 1 GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQL-DRGVDDV 59 Query: 71 -ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E +D E L +++++E +F + SG+ DS+D YL++ AG+GGTE Sbjct: 60 EGLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTE 119 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVHR Sbjct: 120 AQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHR 179 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SA Sbjct: 180 LVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESA 239 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG Sbjct: 240 VRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG 299 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 300 SQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 340 >gi|117924338|ref|YP_864955.1| peptide chain release factor 2 [Magnetococcus sp. MC-1] gi|117608094|gb|ABK43549.1| bacterial peptide chain release factor 2 (bRF-2) [Magnetococcus sp. MC-1] Length = 379 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/350 (52%), Positives = 248/350 (70%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +L L G +++ +RLS L + +DP+LW + A+ +M E+ L+ I + Sbjct: 20 IGEKLTLLRGHLNYEQGKERLSELESLAQDPNLWGDSERARTVMTEKNRLEKTIGEWDAL 79 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D LLE+A EE D ++ E + + I +E + +LSGEAD+N+ ++E+H Sbjct: 80 NSESTDARDLLEMAQEEGDSGMIAEVTAQVAAILKRLEGLELARMLSGEADANNCFIEIH 139 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++LLRMY R+ EK FKTE ++ G+EAGIKS T+ ++G AYG+LK Sbjct: 140 PGAGGTESQDWASILLRMYLRYCEKSGFKTEEVDYLAGDEAGIKSVTIKVEGDYAYGYLK 199 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS++RRHTSF+S+ VYP +DDSIEIEI + D R+DT+RASGAGGQH Sbjct: 200 VESGVHRLVRISPFDSSARRHTSFTSVNVYPEIDDSIEIEILDKDLRVDTFRASGAGGQH 259 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH PTG+VVQCQ RSQH+N+ +A MLRA+L++LE+ KR E A + Sbjct: 260 VNKTDSAIRITHQPTGIVVQCQSGRSQHRNRDEAMKMLRARLFQLEMDKRAEAAQAVADA 319 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++I WG QIRSYVL PY++VKDLRT+ E + VLDG+LD F+KA L+ Sbjct: 320 KSDIAWGHQIRSYVLAPYRLVKDLRTSYETGNTDAVLDGELDGFIKAALS 369 >gi|224824516|ref|ZP_03697623.1| peptide chain release factor 2 [Lutiella nitroferrum 2002] gi|224603009|gb|EEG09185.1| peptide chain release factor 2 [Lutiella nitroferrum 2002] Length = 349 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/342 (52%), Positives = 240/342 (70%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL + TEDP +W + A+ L RER+ L++ + I I + D+ Sbjct: 5 FGGIFDYDGKCDRLEEVVRLTEDPDVWNDPKRAQDLGRERKQLEDVVLVIDRISGAVNDS 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L ++A EE+D + D+L + ++ +F + D N+ +L++ AGAGGTE Sbjct: 65 RDLFDMAREENDADTILAVQDDLAEAEAKLAQLEFRRMFHDPMDPNNCFLDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMYTR+AE++ F+ E LE +GE AGI SATL I G AYG L+ E GVHR Sbjct: 125 AQDWAGMLLRMYTRYAERKGFRVEILEESEGEVAGITSATLKISGEYAYGLLRTEVGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR+SP+DSN+RRHTSFSS++VYP VDDS IEI+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 185 LVRVSPFDSNARRHTSFSSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH PTG+VVQCQ +RSQH+N+ +A MLRAKLYELEL+KR E E +KT++GWG Sbjct: 245 VRITHNPTGIVVQCQNDRSQHRNRDEAMQMLRAKLYELELKKRNEAKQALEDTKTDVGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV + +KDLRT+ E + V+DGDLD F++ +L Sbjct: 305 HQIRSYVFDQSR-IKDLRTSYEVGNIKSVMDGDLDGFIEESL 345 >gi|242240700|ref|YP_002988881.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703] gi|242132757|gb|ACS87059.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703] Length = 365 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 188/349 (53%), Positives = 242/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I+++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEMIVDTIEQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL+LA+EEDD ET L +++ ++ +F + SGE DS D Y+++ Sbjct: 74 NQGLEDVTGLLDLAVEEDDEETFNETIIELDQLENKLGQLEFRRMFSGEYDSADCYIDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ + G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESEGEVAGIKSATIKVVGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE ELQK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYEFELQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 361 >gi|311693658|gb|ADP96531.1| peptide chain release factor 2 [marine bacterium HP15] Length = 351 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/343 (53%), Positives = 244/343 (71%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL + + E P +W + A+ L +ER L+ + I + L D Sbjct: 8 GGIFDYDQRSERLIEVERELEQPSVWDDPERAQALGKERADLELIVKTIDNLTSGLEDAE 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL++A EE+D + E +L+ + E+E +F + SGE D+N+AYL++ AG+GGTE+ Sbjct: 68 GLLDIAAEEEDEGTVAEIESDLEGLDKELEKLEFRRMFSGEMDANNAYLDIQAGSGGTEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWANMLLRMY RWAE+R FK E +E+ +GE AGIKSAT+ I+G AYGWL+ E GVHRL Sbjct: 128 QDWANMLLRMYLRWAERRGFKAEIVELMEGEVAGIKSATIHIQGDYAYGWLRTETGVHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN T+SAV Sbjct: 188 VRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRTESAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+VV CQ RSQH+NK QA L+AKL+E E+Q+R E +K +IGWG Sbjct: 248 RLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADIGWGS 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL + +KDLRT +E ++ VLDGD+D F++A+L + Sbjct: 308 QIRSYVLDDSR-IKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349 >gi|221198422|ref|ZP_03571468.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2M] gi|221208901|ref|ZP_03581898.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2] gi|221214768|ref|ZP_03587737.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD1] gi|221165307|gb|EED97784.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD1] gi|221171184|gb|EEE03634.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2] gi|221182354|gb|EEE14755.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2M] Length = 367 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/342 (52%), Positives = 249/342 (72%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L G +D RL+ +N + EDP++W + A+ L RE++ L+ ++ + E+ + L D Sbjct: 23 LRGYLCYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTELDNDLRDA 82 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L L ELA EE D L + ++ +++ V +F + S AD N+ ++++ AGAGGTE Sbjct: 83 LDLFELAREEGDEDTLIASEEDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTE 142 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+HR Sbjct: 143 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLRTETGIHR 202 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 262 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ + ESSKT++GWG Sbjct: 263 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAELRKRQAEQDKLESSKTDVGWG 322 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 323 HQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 363 >gi|206560551|ref|YP_002231316.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315] gi|238693117|sp|B4EDB1|RF2_BURCJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|198036593|emb|CAR52490.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315] Length = 367 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/342 (52%), Positives = 249/342 (72%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L G D+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L D Sbjct: 23 LRGYLDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 82 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L L ELA EE D L + ++ +++ V +F + S AD N+ ++++ AGAGGTE Sbjct: 83 LDLFELAREEGDEDTLLASEEDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 142 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+HR Sbjct: 143 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHR 202 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 262 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + ESSKT++GWG Sbjct: 263 VRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWG 322 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 323 HQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 363 >gi|298500779|ref|ZP_07010582.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae MAK 757] gi|297540560|gb|EFH76618.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae MAK 757] Length = 344 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 184/342 (53%), Positives = 245/342 (71%), Gaps = 3/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ DR D++ Sbjct: 1 GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQL-DRGVDDV 59 Query: 71 -ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E +D E L ++ ++E +F + SG+ DS+D YL++ AG+GGTE Sbjct: 60 EGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTE 119 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVHR Sbjct: 120 AQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHR 179 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SA Sbjct: 180 LVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESA 239 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG Sbjct: 240 VRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWG 299 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 300 SQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 340 >gi|39997376|ref|NP_953327.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA] gi|39984267|gb|AAR35654.1| peptide chain release factor 2, programmed frameshift [Geobacter sulfurreducens PCA] gi|307634992|gb|ADI85036.2| peptide chain release factor 2 [Geobacter sulfurreducens KN400] Length = 372 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/345 (53%), Positives = 243/345 (70%), Gaps = 6/345 (1%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L G D D+ + + L + P W N EA+ ++RER ++ I + + D Sbjct: 19 LRGSLDIDSKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNRQADDI 78 Query: 70 LILLELALEEDDCSILQET---SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +L+EL E D + L E +D+L+R EVE +F+ +LSG D N ++ ++AGAG Sbjct: 79 RVLIELGEEAQDEATLDEVRALNDSLER---EVEGAEFQRMLSGPHDKNSCFVSINAGAG 135 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA MLLRMY R+ E++ +KTE + G+EAG+KSAT + G AYG+LK E G Sbjct: 136 GTEAQDWAEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAEAG 195 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+DSN+RRHTSF+S++V+P ++D IEI+I+ESD R+DTYR+SGAGGQHVNTT Sbjct: 196 IHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVNTT 255 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ ERSQH NKA A MLRAKLYE ELQ+RE A+ K +I Sbjct: 256 DSAVRLTHLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKKDI 315 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL PY+MVKDLRT +E +P VLDG L+DF+ A L Sbjct: 316 GWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEDFVVAFL 360 >gi|257453984|ref|ZP_05619260.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60] gi|257448649|gb|EEV23616.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60] Length = 349 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/342 (52%), Positives = 242/342 (70%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD + +RL +N + E+P LW + A + +E+ LDN I I + D+L D Sbjct: 5 FGGIFDIEAKQERLEEVNLELENPELWNDPERATKISKEKSQLDNVIGVITALDDKLEDA 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +++LA+E DD ++L + L + +V +F+ + SGE D N+ Y+++ +G+GGTE Sbjct: 65 KAMIDLAVEADDATLLADVQAELDEAEAKVADLEFKRMFSGEMDGNNCYVDIQSGSGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMY RW E FK E +E+ G AGIKSA++ +KG A+GWL+ E GVHR Sbjct: 125 AQDWAEMLLRMYLRWCESHGFKAEIMELSAGGVAGIKSASIHVKGDYAFGWLRTEIGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSA Sbjct: 185 LVRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH PTG+VV CQ ERSQH NK A MLRAKLYE E+ +R E E +K++IGWG Sbjct: 245 VRITHQPTGIVVACQNERSQHANKDTAMKMLRAKLYEREMMQRMEKQQALEETKSDIGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 305 SQIRSYVLDDSR-IKDLRTGVETSNTQAVLDGDLDKFIEASL 345 >gi|269103439|ref|ZP_06156136.1| peptide chain release factor 2 [Photobacterium damselae subsp. damselae CIP 102761] gi|268163337|gb|EEZ41833.1| peptide chain release factor 2 [Photobacterium damselae subsp. damselae CIP 102761] Length = 347 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 181/343 (52%), Positives = 241/343 (70%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ + D Sbjct: 2 SLGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+E +D E L ++ ++ +F + SG+ D +D YL++ AG+GGT Sbjct: 62 VEGLLELAVEAEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDGSDCYLDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVH Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRISGEYAYGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+S +VYP VDD+I+I+I+ SD RID YRASGAGGQHVNTT+S Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEVDDNIDIDINPSDLRIDVYRASGAGGQHVNTTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPT VVQCQ +RSQHKNK QA L+AKL+ELE+QK+ E SK++IGW Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLKAKLFELEMQKQNAEKQANEDSKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 343 >gi|157964348|ref|YP_001499172.1| peptide chain release factor 2 [Rickettsia massiliae MTU5] gi|157844124|gb|ABV84625.1| Peptide chain release factor RF-2 [Rickettsia massiliae MTU5] Length = 337 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 181/324 (55%), Positives = 237/324 (73%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 T +P LW + A+ L+RE+ +L+ ++ +++ L D L L E+A E+D L + Sbjct: 8 TANPSLWNDQANAQKLLREKSNLEEKLNAFNKLKSNLKDALELEEMAEAENDLETLSQIE 67 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+ + + + E L SGEAD N+ +LE++AGAGGTES DWA++++RMY R+AE+ Sbjct: 68 QDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYLRFAERLG 127 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE + + +GEEAGIKS T+ I G AYGW K E GVHRLVRISP+++ +R TSF+S Sbjct: 128 FKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKRMTSFASS 187 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPTG V QCQ +RSQ Sbjct: 188 WVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQSDRSQ 247 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRSYVLQPYQMVKDLRT+ Sbjct: 248 HKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRSYVLQPYQMVKDLRTD 307 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDGDL++F+ A LA+ Sbjct: 308 YETSDTKGVLDGDLEEFVSANLAM 331 >gi|251790993|ref|YP_003005714.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591] gi|247539614|gb|ACT08235.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591] Length = 365 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 188/349 (53%), Positives = 241/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD +T L +++ ++ +F + SGE DS D YL++ Sbjct: 74 VQGLDDVAGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 361 >gi|91762141|ref|ZP_01264106.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus Pelagibacter ubique HTCC1002] gi|91717943|gb|EAS84593.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus Pelagibacter ubique HTCC1002] Length = 284 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 169/278 (60%), Positives = 224/278 (80%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELALEE + S++ E ++++ +K + + + LS E DS + Y+E+HAGAGGTESQDW Sbjct: 3 ELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLNCYIEIHAGAGGTESQDW 62 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY +W++ + FK+E + H GEEAGIKS+T+ I+G +GWLK E G+HRLVRI Sbjct: 63 AEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLVRI 122 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS +RRHTSF+SIW+YPV+D++IEIEI+E D RIDTYR+SGAGGQHVNTTDSAVRIT Sbjct: 123 SPFDSGARRHTSFASIWIYPVIDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAVRIT 182 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+P+ +VVQCQ ERSQHKNK NML+A+LY+ EL+K+E+ + ESSK+EIGWG QIR Sbjct: 183 HLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGHQIR 242 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL PY+MVKD RTN E ++P +LDG++DDF++++L Sbjct: 243 SYVLHPYRMVKDNRTNFESSNPDKILDGEIDDFLESSL 280 >gi|307129433|ref|YP_003881449.1| putative peptide chain release factor 2 [Dickeya dadantii 3937] gi|306526962|gb|ADM96892.1| putative peptide chain release factor 2 [Dickeya dadantii 3937] Length = 365 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 188/349 (53%), Positives = 241/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSERTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD +T L +++ ++ +F + SGE DS D YL++ Sbjct: 74 VQGLDDVSGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 361 >gi|15604144|ref|NP_220659.1| peptide chain release factor 2 [Rickettsia prowazekii str. Madrid E] gi|6225944|sp|Q9ZDQ2|RF2_RICPR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|3860836|emb|CAA14736.1| PEPTIDE CHAIN RELEASE FACTOR 2 (prfB) [Rickettsia prowazekii] Length = 369 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/352 (50%), Positives = 246/352 (69%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ + D + RL+ L T DP+LW N A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLDLIWRSLDIEALTVRLTELEELTADPNLWNNNANAQTLLREKNNLEEKLNVFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L + L L +A E+D L + + +++ + + E L SGE D N+ +LE+ Sbjct: 71 LKSNLKEILELEAMAEVENDLETLNQIEQDFKKLSIITAKFETECLFSGETDCNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKT+ + + +GEE GIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTKIINMINGEEVGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S W+YP +DD I I I + D RIDT+R+SGAGGQ Sbjct: 191 KTESGVHRLVRISPFNAAGKRMTSFASSWIYPEIDDDIAITIEDKDLRIDTFRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPT V QCQ +RSQHKNKAQA ML+AKLY+LE+QKR E + + Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRNENVDKQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPYQ+VKDLRTN E + VLDG+L+DF+ A+L++ Sbjct: 311 NKTDNSWGHQIRSYVLQPYQIVKDLRTNYETSDTKGVLDGNLEDFVSASLSM 362 >gi|50119718|ref|YP_048885.1| peptide chain release factor 2 [Pectobacterium atrosepticum SCRI1043] gi|81646129|sp|Q6D946|RF2_ERWCT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|49610244|emb|CAG73687.1| putative peptide chain release factor 2 [Pectobacterium atrosepticum SCRI1043] Length = 365 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/349 (53%), Positives = 241/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LAERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD ETS L ++ ++ +F + SGE DS D YL++ Sbjct: 74 AQGLEDVTGLLELAVEEDDEDTFNETSAELDVLENKLGQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E + Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQVMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|70728519|ref|YP_258268.1| peptide chain release factor 2, programmed frameshift [Pseudomonas fluorescens Pf-5] gi|68342818|gb|AAY90424.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens Pf-5] Length = 364 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 183/349 (52%), Positives = 244/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + G D+D +RL+ +N + EDP +W A+ L RER L + + E+ Sbjct: 13 LSERSETIRGYLDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVETLDEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL++A+EE+D + + L R++ + +F + S E D N+AYL++ Sbjct: 73 NGGLADCRDLLDMAVEEEDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQH Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYE E+QKR + E + Sbjct: 253 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRTNIE++ VLDGD+D++++A+L Sbjct: 313 KSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLEASL 360 >gi|15642771|ref|NP_230312.1| peptide chain release factor 2 [Vibrio cholerae O1 biovar El Tor str. N16961] Length = 365 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/350 (52%), Positives = 247/350 (70%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S + N L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 VSERTNILRGYLDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQL 73 Query: 63 QDRLCDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 DR D++ LLELA+E +D E L ++ ++E +F + SG+ DS+D YL++ Sbjct: 74 -DRGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL Sbjct: 133 QAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E Sbjct: 253 HVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 361 >gi|289208167|ref|YP_003460233.1| hypothetical protein TK90_0982 [Thioalkalivibrio sp. K90mix] gi|288943798|gb|ADC71497.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix] Length = 364 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/343 (52%), Positives = 243/343 (70%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD+ +RL + + E+P +W + A+ L +ER L+N + I+EI +L D Sbjct: 19 ALGGIFDYPVKEERLEEVQRELENPDIWNDPDRAQALGKERAQLENIVVNIREIGTQLDD 78 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LLE+A +DD +++ + VE +F + SG+ D +AYL++ AG+GGT Sbjct: 79 SRDLLEMAEADDDAETASAVEADVEALTARVEALEFRRMFSGDMDEANAYLDIQAGSGGT 138 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWAN+LLRMY RWAE FKTE +E+ +GE AGIKSAT+ I+G A+GWL+ E GVH Sbjct: 139 EAQDWANILLRMYLRWAEAHGFKTEIIELSEGEVAGIKSATVRIEGEYAFGWLRTETGVH 198 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS +RRHTSF+S++ P VDDS EIEI+ +D R+DTYRASGAGGQHVN T+S Sbjct: 199 RLVRKSPFDSGNRRHTSFASVFASPEVDDSFEIEINPADLRVDTYRASGAGGQHVNRTES 258 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH P+G+VV CQ +RSQHKN+ A L+AKLYE+E+QKR E +K++IGW Sbjct: 259 AIRITHEPSGIVVACQNDRSQHKNRDTAMKQLKAKLYEMEIQKRNAEKQAAEDAKSDIGW 318 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 319 GSQIRSYVLDQSR-IKDLRTGVEVGNTQAVLDGDLDQFIEASL 360 >gi|254261824|ref|ZP_04952878.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1710a] gi|254220513|gb|EET09897.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1710a] Length = 367 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/349 (51%), Positives = 251/349 (71%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G +D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 363 >gi|113867189|ref|YP_725678.1| protein chain release factor B [Ralstonia eutropha H16] gi|113525965|emb|CAJ92310.1| protein chain release factor B (RF-2) [Ralstonia eutropha H16] Length = 357 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 177/347 (51%), Positives = 251/347 (72%), Gaps = 1/347 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 R+ GG+FD+D V RL +N EDP +W N A+ L +E++ ++ +S + ++ D Sbjct: 8 RERKIYGGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKAIEGVVSVLSKLTD 67 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L L ELA EE D L+ +++ + V +F + SGE D +A++++ AG Sbjct: 68 DLSGAEELFELAREEGDDDTLEAIEADVKGFEEIVAGMEFRRMFSGEMDQANAFIDIQAG 127 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ I+G A+G+L+ E Sbjct: 128 AGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTE 187 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR SP+DS+ RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N Sbjct: 188 TGVHRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHIN 247 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT Sbjct: 248 KTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKT 307 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 308 DVGWGHQIRSYVLDQSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASL 353 >gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40] gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus degradans 2-40] Length = 347 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/343 (52%), Positives = 242/343 (70%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 CLGG+F++ +RL+ + + +P +W + A+ L ER L+ + I+ +++ + D Sbjct: 2 CLGGIFEYAEKKERLAEVELELAEPDVWDDPARAQALGSERSSLELVVETIETLENGVAD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLE+A+EE D E R++ + +F + SGE D N+AYL++ AG+GGT Sbjct: 62 CRELLEMAIEESDEDSFLEICSEADRLEAHLATLEFRRMFSGEMDPNNAYLDIQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA MLLRMY RW E + FKT E G+ AGIKSAT+ +G A+GWL+ E GVH Sbjct: 122 EAQDWAEMLLRMYLRWGEDKGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS +RRHTSFSS++V P +DD+I+IEI+++D R DTYRASGAGGQHVN TDS Sbjct: 182 RLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIEINKADVREDTYRASGAGGQHVNKTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH PTG+VVQCQ ERSQH N+ +AW MLRA++YE E+QKR E SK++IGW Sbjct: 242 AVRLTHAPTGIVVQCQSERSQHSNRDKAWKMLRARVYEQEMQKRNAEKQALEDSKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL Q +KDLRTN++ ++ + VLDG LDDF+ A+L Sbjct: 302 GSQIRSYVLDD-QRIKDLRTNVQTSNCNAVLDGKLDDFIVASL 343 >gi|260427583|ref|ZP_05781562.1| peptide chain release factor 2 [Citreicella sp. SE45] gi|260422075|gb|EEX15326.1| peptide chain release factor 2 [Citreicella sp. SE45] Length = 397 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 191/351 (54%), Positives = 241/351 (68%), Gaps = 2/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ LG DW+ A RL N + EDP+LW + A+ LMR+RQ L +A+ Sbjct: 35 KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQMLVDAMETYSS 94 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+E+ E+D ++ E L+ + + K+ E+LL GEAD ND +LE+ Sbjct: 95 IKQELSDNVELIEMGEMEEDDEVVSEAEAALRALAEKAGQKELEALLDGEADGNDTFLEI 154 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTE+ DWA ML RMY RWAEKR + E G EAG KS I G NAYGWL Sbjct: 155 NAGAGGTEACDWAAMLQRMYVRWAEKRGYDVELQFEEAGAEAGTKSCGYKISGTNAYGWL 214 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+ + R TSF+S+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ Sbjct: 215 KSESGVHRLVRISPFGKGT-RETSFASVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 273 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPT +VV E+SQH+N+ A L+++LY++EL KR N Sbjct: 274 HVNTTDSAVRITHIPTNIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDKRNAEINAQHE 332 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA Sbjct: 333 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLA 383 >gi|322831509|ref|YP_004211536.1| Peptide chain release factor 2 [Rahnella sp. Y9602] gi|321166710|gb|ADW72409.1| Peptide chain release factor 2 [Rahnella sp. Y9602] Length = 365 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 188/349 (53%), Positives = 237/349 (67%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I E+ Sbjct: 14 LSERTVVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDEL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D LLELA+E DD ET L + ++E +F + SGE DS YL++ Sbjct: 74 LQGAEDVTGLLELAVEADDEDTFNETVAELDVLTAKLEQLEFRRMFSGEYDSASCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGEVAGLKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD IEIEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIEIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +V QCQ +RSQHKNK QA +RAKLYE E+QK+ E + Sbjct: 254 VNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQMRAKLYEYEMQKKNADKQQLEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|217420389|ref|ZP_03451894.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 576] gi|226195477|ref|ZP_03791065.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei Pakistan 9] gi|237813009|ref|YP_002897460.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei MSHR346] gi|238561621|ref|ZP_00441741.2| peptide chain release factor 2, programmed frameshift [Burkholderia mallei GB8 horse 4] gi|242317384|ref|ZP_04816400.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1106b] gi|251767233|ref|ZP_04820018.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei PRL-20] gi|284159918|ref|YP_001059616.2| peptide chain release factor 2, programmed [Burkholderia pseudomallei 668] gi|217395801|gb|EEC35818.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 576] gi|225932437|gb|EEH28436.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei Pakistan 9] gi|237504244|gb|ACQ96562.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei MSHR346] gi|238524226|gb|EEP87660.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei GB8 horse 4] gi|242140623|gb|EES27025.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1106b] gi|243063468|gb|EES45654.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei PRL-20] gi|261825971|gb|ABN00993.2| peptide chain release factor 2, programmed frameshift [Burkholderia mallei NCTC 10229] gi|261835054|gb|ABO05438.2| peptide chain release factor 2, programmed frameshift [Burkholderia mallei NCTC 10247] gi|283775112|gb|ABN84239.2| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 668] Length = 367 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/349 (51%), Positives = 251/349 (71%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G +D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 363 >gi|260599230|ref|YP_003211801.1| peptide chain release factor 2 [Cronobacter turicensis z3032] gi|260218407|emb|CBA33491.1| Peptide chain release factor 2 [Cronobacter turicensis z3032] Length = 342 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 183/339 (53%), Positives = 237/339 (69%), Gaps = 1/339 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD+D +RL +N + E P +W A+ L +ER L+ + + ++ L D L Sbjct: 1 MFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETLDQMSQGLDDVAGL 60 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LELA+E DD E L +++ ++ +F + SGE DS D YL++ AG+GGTE+QD Sbjct: 61 LELAVEADDEETFNEAVVELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQD 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA+MLLRMY RWAE R FKTE +E +GE AG+KSAT+ I G A+GWL+ E GVHRLVR Sbjct: 121 WASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRTETGVHRLVR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHVN T+SAVRI Sbjct: 181 KSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRI 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG QI Sbjct: 241 THIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 RSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 338 >gi|194289273|ref|YP_002005180.1| peptide chain release factor rf-2 [Cupriavidus taiwanensis LMG 19424] gi|193223108|emb|CAQ69113.1| peptide chain release factor RF-2 [Cupriavidus taiwanensis LMG 19424] Length = 357 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 177/341 (51%), Positives = 248/341 (72%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D V RL +N EDP +W N A+ L +E++ L+ + + ++ D L Sbjct: 14 GGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKMLEGVVGVLGKLTDDLVGAE 73 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ELA EE D L+ +++ + V +F + SGE D +A++++ AGAGGTE+ Sbjct: 74 ELFELAKEEGDDDTLESIEADVKGFEAVVADMEFRRMFSGEMDQANAFIDIQAGAGGTEA 133 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ I+G A+G+L+ E GVHRL Sbjct: 134 CDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRL 193 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSFSS++VYP VDDS E+EI+ +D R+DTYRASGAGGQH+N TDSAV Sbjct: 194 VRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEINPADLRVDTYRASGAGGQHINKTDSAV 253 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++GWG Sbjct: 254 RITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVGWGH 313 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 314 QIRSYVLDQSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASL 353 >gi|260581088|ref|ZP_05848909.1| peptide chain release factor 2 [Haemophilus influenzae RdAW] gi|260092217|gb|EEW76159.1| peptide chain release factor 2 [Haemophilus influenzae RdAW] Length = 351 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 185/345 (53%), Positives = 249/345 (72%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L C GG+FD+D V+RL +N + E P +W + +A+ L +ER L+ ++ IK ++ L Sbjct: 4 LQCFGGIFDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGL 63 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E +D E L ++ ++E +F + SGE D+ D Y+++ AG+G Sbjct: 64 EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G Sbjct: 124 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++I Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 GWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 347 >gi|311278189|ref|YP_003940420.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1] gi|308747384|gb|ADO47136.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1] Length = 365 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 185/349 (53%), Positives = 240/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLNQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 AQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AG+KSAT+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGLKSATIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIP+G+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPSGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|51597475|ref|YP_071666.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP 32953] gi|81638630|sp|Q666T2|RF2_YERPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|51590757|emb|CAH22402.1| Peptide chain release factor 2 [Yersinia pseudotuberculosis IP 32953] Length = 366 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 185/341 (54%), Positives = 239/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD+D +RL +N + E P +W A+ L +ER L+ ++ I +++ L D Sbjct: 23 GYLFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQLEQGLEDVS 82 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E DD ET L+ + ++ +F + SGE D + YL++ AG+GGTE+ Sbjct: 83 GLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQAGSGGTEA 142 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+MLLRMY RWAE R FKTE +E DG+ AG+KSAT+ I G A+GWL+ E GVHRL Sbjct: 143 QDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLRTETGVHRL 202 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 203 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Sbjct: 263 RITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGS 322 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 323 QIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 362 >gi|293610588|ref|ZP_06692888.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826932|gb|EFF85297.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 337 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 175/331 (52%), Positives = 239/331 (72%), Gaps = 1/331 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +RL + + EDP +W + A+ + +E+ L+N I+ + + +L D +L+LA+E D Sbjct: 4 ERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEAD 63 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+L++ L + E+ +F + S D N Y+E+ +G+GGTE+QDWA+MLLRM Sbjct: 64 DESLLEDVQSELGAAEDELAKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRM 123 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RW E+ FK E +E+ DG+ AGIKSAT+ ++G AYGWL+ E GVHRLVR SP+DS + Sbjct: 124 YMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGN 183 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR+THIPTG+V Sbjct: 184 RRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 243 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V CQ +RSQH N+ AW LRA+LYELE+QKR E A E SK++IGWG QIRSYVL Sbjct: 244 VACQNQRSQHANRDHAWKQLRARLYELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS 303 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 304 R-IKDLRTGVENSNTGAVLDGDLDRFIEASL 333 >gi|326794289|ref|YP_004312109.1| peptide chain release factor 2 [Marinomonas mediterranea MMB-1] gi|326545053|gb|ADZ90273.1| Peptide chain release factor 2 [Marinomonas mediterranea MMB-1] Length = 364 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 178/349 (51%), Positives = 245/349 (70%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL ++ + EDP +W + A+ L +ER L+ + + + Sbjct: 13 LSERSQILRGYLDYDAKKERLEEVSRELEDPEIWNDPEYAQKLGKERSTLEAVVETLDNL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D+ LL++A+EEDD ++ L + ++ +F + SGE D+N A+L++ Sbjct: 73 ESGVEDSKDLLDMAVEEDDADSVEAVELELNDLDEQLAKLEFRRMFSGEMDANSAFLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWANMLLRMY RW E + FK E +E+ +GE AGIKSAT+ +G A+GWL+ Sbjct: 133 SGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSEGEVAGIKSATVRFEGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S+++ P +DD++EI+I+ +D RIDTYR+SGAGGQH Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFASVFLSPEIDDNVEIDINPADLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VVQCQ +RSQH NK A LRAKLYELE+ KR E A E + Sbjct: 253 VNTTDSAVRITHVPTNTVVQCQNQRSQHANKDFAMKQLRAKLYELEMLKRTEAAQALEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E T+ VLDG LD F+ A+L Sbjct: 313 KSDIGWGSQIRSYVLDSSR-IKDLRTGVESTNTGSVLDGSLDQFIVASL 360 >gi|292900474|ref|YP_003539843.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946] gi|291200322|emb|CBJ47450.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946] Length = 365 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 183/349 (52%), Positives = 241/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSTVLRGYLDYDAKKERLQEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E +D E L + ++ +F + SGE DS D Y+++ Sbjct: 74 TQGLEDVSGLLELAVEAEDEDTFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ E + Sbjct: 254 VNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 361 >gi|104780459|ref|YP_606957.1| peptide chain release factor 2 [Pseudomonas entomophila L48] gi|95109446|emb|CAK14147.1| peptide chain release factor 2 [Pseudomonas entomophila L48] Length = 364 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 182/349 (52%), Positives = 244/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + G D+D+ RL +N + ED +W A+ L RER L + + ++ Sbjct: 13 LTERSQSIRGYLDYDHKHDRLVEVNRELEDAAVWNKPEYAQALGRERAMLAQVVETLDKL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL++A+EE+D + + L+ ++ ++ +F + SGE D N+AYL++ Sbjct: 73 SGGLADCQDLLDMAVEENDEGAVGDVVTELEGLEEKLAQLEFRRMFSGEMDMNNAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ IKG A+GWL+ Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQH Sbjct: 193 TEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E S Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDS 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E++ VLDGDLD +++A+L Sbjct: 313 KSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDQYLEASL 360 >gi|15833017|ref|NP_311790.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. Sakai] gi|26249306|ref|NP_755346.1| peptide chain release factor 2 [Escherichia coli CFT073] gi|30064203|ref|NP_838374.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T] gi|170018863|ref|YP_001723817.1| peptide chain release factor 2 [Escherichia coli ATCC 8739] gi|170682178|ref|YP_001745044.1| peptide chain release factor 2 [Escherichia coli SMS-3-5] gi|215488191|ref|YP_002330622.1| peptide chain release factor 2 [Escherichia coli O127:H6 str. E2348/69] gi|218550138|ref|YP_002383929.1| peptide chain release factor 2 [Escherichia fergusonii ATCC 35469] gi|218559884|ref|YP_002392797.1| peptide chain release factor 2 [Escherichia coli S88] gi|218691016|ref|YP_002399228.1| peptide chain release factor 2 [Escherichia coli ED1a] gi|218696486|ref|YP_002404153.1| peptide chain release factor 2 [Escherichia coli 55989] gi|218701600|ref|YP_002409229.1| peptide chain release factor 2 [Escherichia coli IAI39] gi|218706397|ref|YP_002413916.1| peptide chain release factor 2 [Escherichia coli UMN026] gi|253772268|ref|YP_003035099.1| peptide chain release factor 2 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162803|ref|YP_003045911.1| peptide chain release factor 2 [Escherichia coli B str. REL606] gi|260845559|ref|YP_003223337.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str. 12009] gi|260857014|ref|YP_003230905.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str. 11368] gi|260869568|ref|YP_003235970.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str. 11128] gi|54039052|sp|P66024|RF2_ECO57 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54039053|sp|P66025|RF2_SHIFL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54041596|sp|P66023|RF2_ECOL6 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|189040000|sp|B1ITB1|RF2_ECOLC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739125|sp|B7MM78|RF2_ECO45 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739126|sp|B7NW32|RF2_ECO7I RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739128|sp|B7N7D5|RF2_ECOLU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739129|sp|B1LR73|RF2_ECOSM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739130|sp|B7LPA4|RF2_ESCF3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790914|sp|B7UHU0|RF2_ECO27 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790915|sp|B7LF76|RF2_ECO55 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790916|sp|B7MZI9|RF2_ECO81 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|26109714|gb|AAN81919.1|AE016766_7 Peptide chain release factor 2 [Escherichia coli CFT073] gi|13363235|dbj|BAB37186.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str. Sakai] gi|30042460|gb|AAP18184.1| peptide chain release factor RF-2 [Shigella flexneri 2a str. 2457T] gi|169753791|gb|ACA76490.1| hypothetical protein EcolC_0818 [Escherichia coli ATCC 8739] gi|170519896|gb|ACB18074.1| peptide chain release factor 2 [Escherichia coli SMS-3-5] gi|215266263|emb|CAS10692.1| peptide chain release factor RF-2 [Escherichia coli O127:H6 str. E2348/69] gi|218353218|emb|CAU99134.1| peptide chain release factor RF-2 [Escherichia coli 55989] gi|218357679|emb|CAQ90320.2| peptide chain release factor RF-2 [Escherichia fergusonii ATCC 35469] gi|218366653|emb|CAR04407.2| peptide chain release factor RF-2 [Escherichia coli S88] gi|218371586|emb|CAR19425.2| peptide chain release factor RF-2 [Escherichia coli IAI39] gi|218428580|emb|CAR09507.2| peptide chain release factor RF-2 [Escherichia coli ED1a] gi|218433494|emb|CAR14397.2| peptide chain release factor RF-2 [Escherichia coli UMN026] gi|253323312|gb|ACT27914.1| hypothetical protein ECBD_0846 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974704|gb|ACT40375.1| peptide chain release factor 2 [Escherichia coli B str. REL606] gi|253978870|gb|ACT44540.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)] gi|257755663|dbj|BAI27165.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str. 11368] gi|257760706|dbj|BAI32203.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str. 12009] gi|257765924|dbj|BAI37419.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str. 11128] gi|309703251|emb|CBJ02586.1| peptide chain release factor 2 (RF-2) [Escherichia coli ETEC H10407] gi|313848742|emb|CAQ33203.2| peptide chain release factor RF2 [Escherichia coli BL21(DE3)] gi|323377221|gb|ADX49489.1| Peptide chain release factor 2 [Escherichia coli KO11] Length = 365 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 185/349 (53%), Positives = 239/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|238787318|ref|ZP_04631117.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641] gi|238724580|gb|EEQ16221.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641] Length = 347 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 183/341 (53%), Positives = 238/341 (69%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ ++ I ++ + D Sbjct: 4 GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSALEEIVTTIDQLDQGMEDVS 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+GGTE+ Sbjct: 64 GLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E GVHRL Sbjct: 124 QDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 184 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Sbjct: 244 RITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 QIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 343 >gi|114776305|ref|ZP_01451350.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1] gi|114553135|gb|EAU55533.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1] Length = 372 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 182/341 (53%), Positives = 234/341 (68%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG FD D + L LN + EDP LW EA+ LM+E+ ++ + + L D L Sbjct: 23 GGHFDVDAREEELRELNARIEDPTLWDRPEEAQKLMQEKTRIERTLQTFHNSTEALDDAL 82 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+ EE D E + L ++ E+E + +L GE D+ A+L+++AG+GGTE+ Sbjct: 83 TLFEMGAEESDPDTQMEAVETLDSVQAELEALELARMLGGETDAESAFLDINAGSGGTEA 142 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RWAE++ FKTE +E GEEAGIKSAT+ IKG AYG+LK E GVHRL Sbjct: 143 QDWAEMLLRMYLRWAERKGFKTELMECTAGEEAGIKSATVSIKGEYAYGFLKAEVGVHRL 202 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SPYDS +RRHTSF+S++ YP ++ IEI+I SD R DTYRASGAGGQH+N TDSAV Sbjct: 203 VRKSPYDSGNRRHTSFASVFAYPDIEKDIEIDIDPSDVRTDTYRASGAGGQHINKTDSAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PT +VVQCQ +RSQHKN+A AW+ML+A+LYE EL R E KT+IGWG Sbjct: 263 RLTHVPTNIVVQCQNDRSQHKNRAAAWSMLKARLYEHELNLRNAEKQEIEDGKTDIGWGH 322 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + LDGD+D F++A L Sbjct: 323 QIRSYVLDQSR-IKDLRTGMETGNTQAFLDGDIDAFIQAEL 362 >gi|218555439|ref|YP_002388352.1| peptide chain release factor 2 [Escherichia coli IAI1] gi|226739127|sp|B7LYF5|RF2_ECO8A RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|218362207|emb|CAQ99825.2| peptide chain release factor RF-2 [Escherichia coli IAI1] Length = 365 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 185/349 (53%), Positives = 239/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|150260100|ref|ZP_01916828.1| peptide chain release factor 2 [Yersinia pestis CA88-4125] gi|153948098|ref|YP_001399866.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP 31758] gi|218928062|ref|YP_002345937.1| peptide chain release factor 2 [Yersinia pestis CO92] gi|229837575|ref|ZP_04457737.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A] gi|229840798|ref|ZP_04460957.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842643|ref|ZP_04462798.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. India 195] gi|229903704|ref|ZP_04518817.1| Peptide chain release factor 2 [Yersinia pestis Nepal516] gi|257168082|ref|NP_670572.2| peptide chain release factor 2 [Yersinia pestis KIM 10] gi|166977375|sp|A7FF38|RF2_YERP3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|149289508|gb|EDM39585.1| peptide chain release factor 2 [Yersinia pestis CA88-4125] gi|152959593|gb|ABS47054.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP 31758] gi|229679474|gb|EEO75577.1| Peptide chain release factor 2 [Yersinia pestis Nepal516] gi|229690953|gb|EEO83007.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. India 195] gi|229697164|gb|EEO87211.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704263|gb|EEO91274.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A] gi|320014035|gb|ADV97606.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 365 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 186/349 (53%), Positives = 241/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ ++ I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD ET L+ + ++ +F + SGE D + YL++ Sbjct: 74 EQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E + Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|149374726|ref|ZP_01892500.1| peptide chain release factor 2 [Marinobacter algicola DG893] gi|149361429|gb|EDM49879.1| peptide chain release factor 2 [Marinobacter algicola DG893] Length = 351 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 180/343 (52%), Positives = 243/343 (70%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL+ + + E P +W++ A+ L +ER L+ + I + L D Sbjct: 8 GGIFDYDQRSERLTEVERELEVPSVWEDPERAQALGKERSDLELIVRTIDNLTSGLEDAE 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLE+A EE+D E +L + E+E +F + SGE D+N+AYL++ AG+GGTE+ Sbjct: 68 GLLEIADEEEDEGTAAEIEADLAGLDKELEKLEFRRMFSGEMDANNAYLDIQAGSGGTEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW NMLLRMY RWAE+R FK E +E+ +G+ AGIKSAT+ I+G A+GWL+ E GVHRL Sbjct: 128 QDWGNMLLRMYLRWAERRGFKAEIVELQEGDVAGIKSATIHIQGDYAFGWLRTETGVHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN T+SAV Sbjct: 188 VRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRTESAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+VV CQ RSQH+NK QA L+AKL+E E+Q+R E +K +IGWG Sbjct: 248 RLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADIGWGS 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL + +KDLRT +E ++ VLDGD+D F++A+L + Sbjct: 308 QIRSYVLDDSR-IKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349 >gi|261820184|ref|YP_003258290.1| peptide chain release factor 2 [Pectobacterium wasabiae WPP163] gi|261604197|gb|ACX86683.1| hypothetical protein Pecwa_0864 [Pectobacterium wasabiae WPP163] Length = 365 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 186/349 (53%), Positives = 240/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEVIVDTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD ETS L ++ ++ +F + SG+ DS D YL++ Sbjct: 74 AQGLEDVAGLLELAVEEDDEDTFNETSLELDVLENKLGQLEFRRMFSGQYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|308048394|ref|YP_003911960.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas balearica DSM 9799] gi|307630584|gb|ADN74886.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas balearica DSM 9799] Length = 365 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 187/350 (53%), Positives = 246/350 (70%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G D+D +RL +N + E P +W A+ L RER +L+ + I + Sbjct: 13 ELSERTELLRGYLDYDAKQERLEEVNAELEQPDVWNEPERAQELGRERSNLEAVVKTIND 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LL+LA+EE D +E L+ ++ ++E +F + SG D+NDAYL++ Sbjct: 73 LDQGLEDVRELLDLAVEEQDEESFEEAKAELEGLEAQLEKLEFRRMFSGAQDANDAYLDL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDW N+LLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G A+GWL Sbjct: 133 QAGSGGTEAQDWCNILLRMYLRWAEAKGFKAEIIEVSEGEVAGLKSATVKISGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRITH+PT VVQCQ ERSQHKNK QA L+AKL+ELE+QK+ E Sbjct: 253 HVNTTESAVRITHMPTNTVVQCQNERSQHKNKDQAMKQLKAKLFELEMQKQNAEKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 361 >gi|78223569|ref|YP_385316.1| peptide chain release factor 2 [Geobacter metallireducens GS-15] gi|78194824|gb|ABB32591.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter metallireducens GS-15] Length = 364 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 190/357 (53%), Positives = 246/357 (68%), Gaps = 11/357 (3%) Query: 1 MKLSRQLN-CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 MK+ R + GGLFD D+ + + + P W + +A+ L+RER ++ I Sbjct: 1 MKIFRSASPSSGGLFDIDSKREDIQEMEAHIAAPGFWDDNEKAQQLLRERTRIEK----I 56 Query: 60 KEIQDRLC----DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 E+ DRL D +L+EL E D L E +++ +VE +F+ +LSG D N Sbjct: 57 LELWDRLTRQADDIRVLIELGEEAGDEGTLDEVRALNDQLEKDVEGAEFQRMLSGTHDKN 116 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 Y ++AGAGGTE+QDWA MLLRMY R+ E++ +KTE + G+EAG+KSAT + G Sbjct: 117 ACYFSINAGAGGTEAQDWAEMLLRMYLRYCERKGWKTEITDYQGGDEAGVKSATFTVDGE 176 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG+LK E G+HRLVRISP+DSN+RRHTSF+S++ +P ++D IE+ I+E+D RIDTYR+ Sbjct: 177 YAYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFAFPEIEDDIEVTINEADLRIDTYRS 236 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-E 294 SGAGGQHVNTTDSAVRITHIPTG+V Q ERSQH NKA A MLRAKLYE ELQ+RE + Sbjct: 237 SGAGGQHVNTTDSAVRITHIPTGLVAASQCERSQHMNKATAMKMLRAKLYEKELQEREAK 296 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 A IG K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDGDL++F+ A L Sbjct: 297 AAEIG-GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVETGNPDAVLDGDLEEFIVAFL 352 >gi|54307774|ref|YP_128794.1| putative peptide chain release factor 2 [Photobacterium profundum SS9] gi|46912197|emb|CAG18992.1| putative peptide chain release factor 2 [Photobacterium profundum SS9] Length = 353 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 179/345 (51%), Positives = 240/345 (69%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L LGG FD+D ++L +N + E P +W A+ L + R L+ + I ++ + Sbjct: 6 LTSLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EEDD E L ++ ++ +F + SGE DS+D Y+++ AG+G Sbjct: 66 EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW +M+LRMY RWA+ + FKTE +E+ G+ AG+KSAT+ + G AYGWL+ E G Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E SK++I Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKKNAEKQANEDSKSDI 305 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 GWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 349 >gi|330839015|ref|YP_004413595.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] gi|329746779|gb|AEC00136.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] Length = 368 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 180/354 (50%), Positives = 240/354 (67%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + + +L +G D ++++ L K +P W N EA+ + +E + ++ K Sbjct: 10 LAMQAKLKEMGDSLDVARKEEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKGSVDKYK 69 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 EI + D LLE+ALEE+D S+ E + IK V + E LLSG D+N+A L Sbjct: 70 EIVSKTDDAQALLEMALEENDTSLEPEVQTEFETIKTAVRELELEVLLSGPYDANNAILT 129 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +HAGAGGTE+QDW MLLRMY RWAE+ F ++ G+EAG+KSATL I G NAYG+ Sbjct: 130 LHAGAGGTEAQDWTQMLLRMYGRWAERHGFSVVTADLLPGDEAGVKSATLFINGHNAYGY 189 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E+GVHRLVRISP+DSN+RRHTSFS+ + P +DD++E+ I+ +D R+DTYRASGAGG Sbjct: 190 LKSEKGVHRLVRISPFDSNARRHTSFSACDIMPEIDDAVEVAINMADVRVDTYRASGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q MLRAKL+ELE +K+E E Sbjct: 250 QHINKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLE 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RT +E + V+DGDLD F++A LA K Sbjct: 310 GDQQKIEWGSQIRSYVFQPYTMVKDMRTGMETGNVQAVMDGDLDAFIEAFLAAK 363 >gi|330814308|ref|YP_004358547.1| peptide chain release factor 2 [Candidatus Pelagibacter sp. IMCC9063] gi|327487403|gb|AEA81808.1| peptide chain release factor 2 [Candidatus Pelagibacter sp. IMCC9063] Length = 312 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 173/308 (56%), Positives = 234/308 (75%) Query: 44 MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103 M+++E+ HL+ ++ K ++ L + L+EL +++D ++ +E +L++++L++ + Sbjct: 1 MVIKEKNHLERILNDYKSYKEELTNIKELVELNTKDNDENLTKELEMSLKKLELKIREIE 60 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LS + D D Y+E+HAGAGGTESQDWA ML MY +WAEK+ F + GEE Sbjct: 61 LFCFLSKKNDELDVYVEIHAGAGGTESQDWAEMLRTMYIKWAEKKSFSFSLISETKGEEV 120 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G KS+T+ I+G AYG+L+ E GVHRLVRISP+DS+ RRHTSF+S+WVYPVV++S+ ++I Sbjct: 121 GFKSSTIKIEGKYAYGFLRHESGVHRLVRISPFDSDKRRHTSFASVWVYPVVNESVVVDI 180 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 ++ D RIDTYR+SGAGGQHVNTTDSAVRITH PT +VVQCQ ERSQHKNK A NML+A+ Sbjct: 181 NDKDLRIDTYRSSGAGGQHVNTTDSAVRITHQPTNIVVQCQNERSQHKNKDTAMNMLKAR 240 Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 LYELELQK++E + ESSKT+IGWG QIRSYVLQPYQMVKD RT +E+T P VLDG L Sbjct: 241 LYELELQKKKEESKSVESSKTDIGWGHQIRSYVLQPYQMVKDSRTGLERTDPDKVLDGHL 300 Query: 344 DDFMKATL 351 + F++ +L Sbjct: 301 NPFLEESL 308 >gi|209519985|ref|ZP_03268764.1| peptide chain release factor 2 [Burkholderia sp. H160] gi|209499582|gb|EDZ99658.1| peptide chain release factor 2 [Burkholderia sp. H160] Length = 384 Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 177/341 (51%), Positives = 248/341 (72%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D+ RL +N + EDP +W + A+ L +E++ LD+ + + I + + D Sbjct: 41 GGIFDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSITNDVNDAQ 100 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+A EE D L + Q I+ V +F + + AD N+A+L++ AGAGGTE+ Sbjct: 101 DLFEMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQAGAGGTEA 160 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y R+ E++ FKTE LE +G+ AGIK+AT+ I+G AYG+L+ E GVHRL Sbjct: 161 CDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLRTETGVHRL 220 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 221 VRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAV 280 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ KT++GWG Sbjct: 281 RITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGH 340 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 341 QIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 380 >gi|330447415|ref|ZP_08311064.1| peptide chain release factor 2 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491606|dbj|GAA05561.1| peptide chain release factor 2 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 347 Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 177/343 (51%), Positives = 240/343 (69%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG FD+D +RL +N + E P +W A+ L +ER L+ + I ++ + D Sbjct: 2 SLGGTFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVED 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+EE+D E L ++ ++ +F + +G+ D +D Y+++ AG+GGT Sbjct: 62 VEGLLELAVEEEDQETFDEIEPELAELEEKLAKLEFRRMFAGDHDPSDCYVDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ + G AYGWL+ E GVH Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRVSGEYAYGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+S Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEIDDNIAIDINPSDLRIDVYRASGAGGQHVNTTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E ELQK+ E SK++IGW Sbjct: 242 AVRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFELQKQNAEKQANEDSKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 343 >gi|262274920|ref|ZP_06052731.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886] gi|262221483|gb|EEY72797.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886] Length = 347 Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 179/343 (52%), Positives = 243/343 (70%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD+D +RL +N + E P +W + A+ L RER L+ + I ++ Sbjct: 2 SLGGIFDYDAKKERLEEVNAELEQPDVWNDPERAQALGRERASLEAVVETIDQLAQGGEY 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+EE+D E L ++ ++ +F + SG+ D++D Y+++ AG+GGT Sbjct: 62 ITELLELAVEENDQETFDEIEPELNDLEDKLAKLEFRRMFSGDHDASDCYIDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVH Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRISGEYAYGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+S ++YP VD++I+I+I+ +D RID YRASGAGGQHVNTT+S Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIDINPADLRIDVYRASGAGGQHVNTTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E++K++IGW Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEAAKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 343 >gi|73540774|ref|YP_295294.1| peptide chain release factor 2 [Ralstonia eutropha JMP134] gi|72118187|gb|AAZ60450.1| bacterial peptide chain release factor 2 (bRF-2) [Ralstonia eutropha JMP134] Length = 357 Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 176/341 (51%), Positives = 249/341 (73%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D V RL +N EDP +W N A+ L +E++ L+ +S + ++ D L Sbjct: 14 GGIFDYDVKVGRLEEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVSVLGKLTDDLNGAD 73 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ELA EE D L+ +++ + V +F + +GE D +A++++ AGAGGTE+ Sbjct: 74 ELFELAKEEGDDETLESIETDVKGFEEIVAGMEFRRMFAGEMDQANAFIDIQAGAGGTEA 133 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ I+G A+G+L+ E GVHRL Sbjct: 134 CDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRL 193 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TDSAV Sbjct: 194 VRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAV 253 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++GWG Sbjct: 254 RITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVGWGH 313 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 314 QIRSYVLDQSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASL 353 >gi|91775149|ref|YP_544905.1| peptide chain release factor 2 [Methylobacillus flagellatus KT] gi|91709136|gb|ABE49064.1| bacterial peptide chain release factor 2 (bRF-2) [Methylobacillus flagellatus KT] Length = 354 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 179/341 (52%), Positives = 245/341 (71%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D QRL ++ EDP++W + ++ L +ER+ L+ ++ + E+++ + D+ Sbjct: 11 GGIFDFDTKQQRLEEVSQLLEDPNIWNDNERSQKLGKERRELEFVVNSLTEVENGVRDSR 70 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+A EE+D L+ + Q ++ V +F + S D N+ +L++ AG+GGTE+ Sbjct: 71 ELFEMAREENDDDTLRSIDADTQALEKIVAEMEFRRMFSHPMDQNNCFLDIQAGSGGTEA 130 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+MLLRMY R+ E + FK E LE +G+ AGIKSA+L I G AYG+L+ E GVHRL Sbjct: 131 QDWASMLLRMYLRYCENKGFKVEVLEESEGDVAGIKSASLKISGDYAYGFLRTESGVHRL 190 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSF+S++VYP VDDSI +EI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 191 VRKSPFDSGNRRHTSFASVFVYPEVDDSIVVEINPADLRIDTYRASGAGGQHINKTDSAV 250 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQH+NK +A NML+A+LY LEL+KR E E +KT+IGWG Sbjct: 251 RITHLPTNTVVQCQNDRSQHRNKDEAMNMLKAQLYALELRKRNEEKQAMEDAKTDIGWGH 310 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E + VLDGDLD F+ +L Sbjct: 311 QIRSYVLDQSR-IKDLRTNVEVGNTQGVLDGDLDPFISESL 350 >gi|28373662|pdb|1MI6|A Chain A, Docking Of The Modified Rf2 X-Ray Structure Into The Low Resolution Cryo-Em Map Of Rf2 E.Coli 70s Ribosome Length = 365 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 239/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYE+E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|283788451|ref|YP_003368316.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium ICC168] gi|282951905|emb|CBG91623.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium ICC168] Length = 365 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 185/349 (53%), Positives = 238/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 AQGLEDVSGLLELAVEADDEETFNEAVAELDMLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|89055024|ref|YP_510475.1| peptide chain release factor 2 [Jannaschia sp. CCS1] gi|88864573|gb|ABD55450.1| bacterial peptide chain release factor 2 (bRF-2) [Jannaschia sp. CCS1] Length = 375 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 191/352 (54%), Positives = 243/352 (69%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ L LG D + A RL N + EDP+LW + +A+ LMR+RQ L + + + Sbjct: 11 KIRNSLTLLGQRMDIETAPHRLEEFNARVEDPNLWNDPEKAQKLMRDRQVLVDKMKQYET 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + DN L+EL EDD ++ E L + E K+ E+LL GEADSND +LE+ Sbjct: 71 IRQGVDDNAELIELGEMEDDAEVVAEAEAALTALVDEAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMYTRWAEK+ + + GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYTRWAEKQGYDVDLQSFSAGEEAGIKSAVYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR N Sbjct: 251 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQMELDKRSAKVNEVHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + GWG QIRSYVLQPYQMVKDLRT E + VLDG++D M + LA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTAFETSDTQGVLDGNIDGLMASVLAM 361 >gi|317049377|ref|YP_004117025.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b] gi|316950994|gb|ADU70469.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b] Length = 365 Score = 365 bits (938), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 182/349 (52%), Positives = 241/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEIIVGTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD ET L ++ ++ +F + SGE DS D Y+++ Sbjct: 74 YQGLEDVQGLLELAVEADDEETFNETIAELDGLETKLGELEFRRMFSGEYDSADCYIDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E +GE AG+KSAT+ + G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIRVSGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAAEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 361 >gi|253687049|ref|YP_003016239.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259585229|sp|C6D8Z5|RF2_PECCP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|251753627|gb|ACT11703.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 365 Score = 365 bits (938), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 241/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD +T+ L ++ ++ +F + SG+ DS D YL++ Sbjct: 74 TQGLEDVAGLLELAVEEDDEDTFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PTG+V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHMPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|90413184|ref|ZP_01221180.1| putative peptide chain release factor 2 [Photobacterium profundum 3TCK] gi|90325875|gb|EAS42327.1| putative peptide chain release factor 2 [Photobacterium profundum 3TCK] Length = 353 Score = 365 bits (937), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 179/345 (51%), Positives = 240/345 (69%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L LGG FD+D ++L +N + E P +W A+ L + R L+ + I ++ + Sbjct: 6 LTFLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EEDD E L ++ ++ +F + SGE DS+D Y+++ AG+G Sbjct: 66 EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW +M+LRMY RWA+ + FKTE +E+ G+ AG+KSAT+ + G AYGWL+ E G Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E SK++I Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKQNAEKQANEDSKSDI 305 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 GWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 349 >gi|260582141|ref|ZP_05849935.1| peptide chain release factor 2 [Haemophilus influenzae NT127] gi|260094773|gb|EEW78667.1| peptide chain release factor 2 [Haemophilus influenzae NT127] Length = 351 Score = 365 bits (937), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 184/345 (53%), Positives = 247/345 (71%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L C GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ IK ++ L Sbjct: 4 LRCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQTLGKERVSLEQVVNTIKNLEQGL 63 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E +D E L ++ ++E +F + SGE D+ D Y+++ AG+G Sbjct: 64 EDVDGLLELAIEAEDEDTFHEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RW E + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G Sbjct: 124 GTEAQDWTEMLLRMYLRWTESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++I Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 GWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 347 >gi|313201599|ref|YP_004040257.1| peptide chain release factor 1 [Methylovorus sp. MP688] gi|312440915|gb|ADQ85021.1| peptide chain release factor 1 [Methylovorus sp. MP688] Length = 347 Score = 365 bits (937), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 176/342 (51%), Positives = 246/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD++ QRL ++ EDP +W + ++ L +ER+ L+ + + E+ + L D+ Sbjct: 3 FGGIFDFETKQQRLEEVSQLLEDPSIWNDNERSQKLGKERRELEFVVKSLTEVDNSLRDS 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A EE+D + L + + ++ +VE +F + + D N+ ++++ +G+GGTE Sbjct: 63 AELFEMAREENDDATLLGIDADSKALEKQVEEMEFRRMFANPMDGNNCFIDIQSGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+MLLRMY R+ E+R FK E LE +G+ AG+KSA+L I G AYG+L+ E GVHR Sbjct: 123 AQDWASMLLRMYLRYCERRGFKVEVLEESEGDVAGLKSASLKISGDYAYGYLRTESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S+ V+P VDDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 183 LVRKSPFDSGNRRHTSFASVSVFPEVDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQH+NKA+A NML+A+LY+LEL KR + E +KT+IGWG Sbjct: 243 VRITHLPTNTVVQCQNDRSQHRNKAEAMNMLKAQLYQLELNKRNQEKQALEDAKTDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E + VLDGDLD F+ +L Sbjct: 303 HQIRSYVLDQSR-IKDLRTNVEIGNTQGVLDGDLDPFISESL 343 >gi|307729220|ref|YP_003906444.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003] gi|307583755|gb|ADN57153.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003] Length = 367 Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 177/342 (51%), Positives = 248/342 (72%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L G D+D+ +RL +N + EDP +W + A+ L RE++ LD+ + + + + L D Sbjct: 23 LRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLRDT 82 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A EE D L + Q ++ V +F + + AD N+A+L++ AGAGGTE Sbjct: 83 QDLFEMAREEGDDETLLACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTE 142 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GVHR Sbjct: 143 ACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHR 202 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSA 262 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+E + E+ KT++GWG Sbjct: 263 VRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWG 322 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 323 HQIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 363 >gi|16130793|ref|NP_417367.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. MG1655] gi|89109670|ref|AP_003450.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. W3110] gi|170082452|ref|YP_001731772.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. DH10B] gi|238902016|ref|YP_002927812.1| peptide chain release factor RF-2 [Escherichia coli BW2952] gi|2507293|sp|P07012|RF2_ECOLI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229576667|sp|B1XEH8|RF2_ECODH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|259585244|sp|C5A0G3|RF2_ECOBW RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|28373696|pdb|1ML5|Z Chain Z, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|2367172|gb|AAC75929.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. MG1655] gi|85675703|dbj|BAE76956.1| peptide chain release factor RF-2 [Escherichia coli str. K12 substr. W3110] gi|169890287|gb|ACB03994.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. DH10B] gi|238861985|gb|ACR63983.1| peptide chain release factor RF-2 [Escherichia coli BW2952] gi|260448063|gb|ACX38485.1| hypothetical protein EcDH1_0801 [Escherichia coli DH1] gi|315137490|dbj|BAJ44649.1| peptide chain release factor RF-2 [Escherichia coli DH1] gi|228558|prf||1806195A peptide chain-releasing factor:ISOTYPE=2 Length = 365 Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 238/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|271499213|ref|YP_003332238.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586] gi|270342768|gb|ACZ75533.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586] Length = 365 Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 187/349 (53%), Positives = 238/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 VQGLDDVAGLLELAVEADDEETFNEAIAELDLLEDKLGQLEFRRMFSGEYDSADCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 361 >gi|94309981|ref|YP_583191.1| peptide chain release factor 2 [Cupriavidus metallidurans CH34] gi|93353833|gb|ABF07922.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34] Length = 357 Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 247/341 (72%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D V RL +N EDP +W N A+ L +E++ L+ + + ++ D L Sbjct: 14 GGIFDYDVKVNRLDEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVQVLGKLTDDLNGTD 73 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ELA EE D L+ ++ + V +F + SGE D +A++++ AGAGGTE+ Sbjct: 74 ELFELAREEGDDETLESIEADVSGFEALVADMEFRRMFSGEMDQANAFIDIQAGAGGTEA 133 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ ++G A+G+L+ E GVHRL Sbjct: 134 CDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKVEGEYAFGYLRTETGVHRL 193 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TDSAV Sbjct: 194 VRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAV 253 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++GWG Sbjct: 254 RITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVGWGH 313 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 314 QIRSYVLDQSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASL 353 >gi|206578228|ref|YP_002236652.1| peptide chain release factor 2 [Klebsiella pneumoniae 342] gi|288933629|ref|YP_003437688.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22] gi|238054482|sp|B5XUF3|RF2_KLEP3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|206567286|gb|ACI09062.1| peptide chain release factor 2 [Klebsiella pneumoniae 342] gi|288888358|gb|ADC56676.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22] Length = 365 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 239/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E +D E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 SQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|126729874|ref|ZP_01745687.1| peptide chain release factor 2 [Sagittula stellata E-37] gi|126709993|gb|EBA09046.1| peptide chain release factor 2 [Sagittula stellata E-37] Length = 374 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 186/353 (52%), Positives = 240/353 (67%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ L W+ A RL N + EDP+LW N A+ LMR+RQ L +A+ Sbjct: 11 KIEKSLDLLKQRLGWETAQHRLEEFNARVEDPNLWDNPEAAQKLMRDRQSLVDALESYTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D + L+EL E+D ++ + L+ + K+ E+LL GE D NDA+LE+ Sbjct: 71 LKQELEDQVELIELGEMEEDAEVVADAEAALKALVETSAKKELEALLDGETDGNDAFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTE+ DWANML RMY RWAEKR F+ + E G EAGIKSAT IKG NAYGWL Sbjct: 131 KAGAGGTEACDWANMLARMYVRWAEKRGFEVDLQEEQAGAEAGIKSATYQIKGKNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G HRLVRISP+ + R TSF+++ YPV+DD+IE+ ++ +D RIDT+R+SGAGGQ Sbjct: 191 KSESGTHRLVRISPFGKGT-RETSFAAVGAYPVIDDNIEVTVNPADIRIDTFRSSGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N Sbjct: 250 HVNTTDSAVRITHHPTGIVV-TSSEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHE 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRT E VLDGDLD FM+ATLA++ Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETADTQGVLDGDLDPFMEATLALQ 361 >gi|147569|gb|AAA24520.1| peptide chain release factor 2 [Escherichia coli] Length = 365 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 183/349 (52%), Positives = 238/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH Sbjct: 194 TETGVHRVVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|33151768|ref|NP_873121.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP] gi|33147989|gb|AAP95510.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP] Length = 351 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 175/344 (50%), Positives = 240/344 (69%), Gaps = 1/344 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ I + + Sbjct: 5 SSFGGIFDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINALIQGIE 64 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L+ELA+E +D L E + ++ +F+ + SG D+ D YL++ AG+GG Sbjct: 65 DVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQAGSGG 124 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+ Sbjct: 125 TEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLRTETGI 184 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQHVN T+ Sbjct: 185 HRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQHVNKTE 244 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+G+VVQCQ RSQH+NK Q LRAKLYE+E+ K+ E +K++IG Sbjct: 245 SAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEENKSDIG 304 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 305 WGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 347 >gi|300718200|ref|YP_003743003.1| peptide chain release factor 2 [Erwinia billingiae Eb661] gi|299064036|emb|CAX61156.1| Peptide chain release factor 2 [Erwinia billingiae Eb661] Length = 348 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 183/341 (53%), Positives = 237/341 (69%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ + + +++ L D Sbjct: 5 GGIFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAIVDTLDQMEQGLEDVR 64 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E DD ET L ++ ++ +F + SGE DS D Y+++ AG+GGTE+ Sbjct: 65 GLLELAVEADDEETFNETIAELDVLEKKLGELEFRRMFSGEYDSADCYIDIQAGSGGTEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML+RMY RWAE + FKTE +E +GE AG KSATL I G A+GWL+ E GVHRL Sbjct: 125 QDWAGMLVRMYLRWAEAKGFKTEIIEESEGEVAGTKSATLRIIGDYAFGWLRTETGVHRL 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 185 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 245 RITHLPTNTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQSLEDNKSDIGWGS 304 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 305 QIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 344 >gi|317405230|gb|EFV85568.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54] Length = 386 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 176/349 (50%), Positives = 251/349 (71%), Gaps = 2/349 (0%) Query: 4 SRQLNCL-GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +R N L GG+FD+D +RL +N + EDP +W + A+ L RE++ L++ + + + Sbjct: 35 TRSANRLYGGIFDYDAKAERLQVVNAELEDPAVWNDPKHAQDLGREKKALEDVVETLTGL 94 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D+ L ELA ++D + L+ + + ++E +F + S AD + +L++ Sbjct: 95 GTGLADSNELFELAAADNDDATLESIELDANGFQEKLESLEFRRMFSNPADPLNCFLDIQ 154 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA+MLLR Y ++AE++ FK E LE +GE AGIKSAT+ ++G A+G+L+ Sbjct: 155 AGAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGEYAFGYLR 214 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP VDDS E+E++ +D R+DTYRASGAGGQH Sbjct: 215 TETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQH 274 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E S Sbjct: 275 INKTDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDS 334 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 335 KTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 382 >gi|238897260|ref|YP_002922937.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465015|gb|ACQ66789.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 348 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 181/351 (51%), Positives = 245/351 (69%), Gaps = 7/351 (1%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 MKLS GG+FD+D +RL +N + E P +W+ A+ L +ER L + + Sbjct: 1 MKLS------GGIFDYDEKKERLEEINAELEQPDIWKQPEWAQKLGKERAILQEIVETLS 54 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +++ L D LL+LA+E D E L+ I ++ +F + SG+ D D YL+ Sbjct: 55 QLEKELKDVSTLLDLAIEAQDRETFNEAVFELEAIDKKLNRLEFRRMFSGKNDFADCYLD 114 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +G+GGTE+QDWANMLLRMY RWA+ + FKTE +EI DGE AGIKSATL I G +A+GW Sbjct: 115 LQSGSGGTEAQDWANMLLRMYLRWADSKGFKTEIIEISDGEVAGIKSATLKITGDHAFGW 174 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHRLVR SP+DS +RRHTSF+S +VYP ++D+I+I+I+ +D RID YRASGAGG Sbjct: 175 LRTETGVHRLVRKSPFDSGARRHTSFASAFVYPELEDNIDIDINPADLRIDVYRASGAGG 234 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T+SAVRITH+PT +V QCQ +RSQHKNK QA+ L+AKLYE E+QK+ I E Sbjct: 235 QHINKTESAVRITHLPTNIVTQCQSDRSQHKNKEQAFKQLKAKLYEFEMQKKNADKKIME 294 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSY+L + +KDLRT +E + VLDG LD F++A+L Sbjct: 295 DNKSDIGWGSQIRSYILDDSR-IKDLRTGLETRNTQAVLDGYLDKFIEASL 344 >gi|172087665|ref|YP_203835.2| peptide chain release factor RF-2 [Vibrio fischeri ES114] gi|229576704|sp|Q5E7P9|RF2_VIBF1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|171902260|gb|AAW84947.2| peptide chain release factor RF-2 [Vibrio fischeri ES114] Length = 365 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 178/349 (51%), Positives = 242/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S + N L G D+D +RL +N + E P +W A+ L +ER L+ + I + Sbjct: 14 VSERTNILRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDLL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LLELA+EE+D E L ++ ++ +F + SG+ D++D Y+++ Sbjct: 74 DQGVEDVDGLLELAVEEEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDASDCYIDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K AT+ I G AYGWL+ Sbjct: 134 SGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLKGATVRIAGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ SD RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPSDLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA LRAKL+E ELQK+ E + Sbjct: 254 VNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFEYELQKQNAEKQANEDA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 361 >gi|123443573|ref|YP_001007546.1| peptide chain release factor 2 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166225120|sp|A1JPL5|RF2_YERE8 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|122090534|emb|CAL13403.1| peptide chain release factor 2 [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 365 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 239/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ ++ I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEEIVTTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LLELA+E DD E L + ++ +F + SGE DS + YL++ Sbjct: 74 DQGMDDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E + Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|120555185|ref|YP_959536.1| peptide chain release factor 2 [Marinobacter aquaeolei VT8] gi|120325034|gb|ABM19349.1| bacterial peptide chain release factor 2 (bRF-2) [Marinobacter aquaeolei VT8] Length = 310 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 175/309 (56%), Positives = 230/309 (74%), Gaps = 1/309 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ + I + + L D LL++A+EEDD +QE +L+ + E+E +F Sbjct: 1 MGKERSDLELIVKTIDNLTNGLADAESLLDMAVEEDDEGTVQEIEADLENLDKELEKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE D+N+AYL++ AG+GGTE+QDW NMLLRMY RWAE+R FK E +E+ +GE AG Sbjct: 61 RRMFSGEMDANNAYLDIQAGSGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ I+G AYGWL+ E GVHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ Sbjct: 121 IKSATIHIQGDYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D R+D YRASGAGGQHVN T+SAVR+TH PTG+VV CQ RSQH+NK QA L+AKL Sbjct: 181 PADLRVDVYRASGAGGQHVNRTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +ELE+QKR E E SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGD+D Sbjct: 241 FELEMQKRNEEKQKAEDSKSDIGWGSQIRSYVLDDSR-IKDLRTKVETSNTQSVLDGDID 299 Query: 345 DFMKATLAI 353 F++A+L + Sbjct: 300 KFIEASLKM 308 >gi|302878965|ref|YP_003847529.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2] gi|302581754|gb|ADL55765.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2] Length = 367 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 180/349 (51%), Positives = 248/349 (71%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + N L D+D +RL+ + EDP +WQ+ A+ L RER+ L++ + + +I Sbjct: 16 LSLRSNELRRYLDYDTKQERLTEVCELAEDPAIWQDAKRAQELGRERKMLESVVFGLGKI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q L D L E++ EE+D + L T+ ++ I+ V +F + + D N ++++ Sbjct: 76 QQDLTDAAELFEMSQEENDEASLMSTAADIDDIERRVAEMEFRRMFNHPMDPNSCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY R+AE++ ++ E LEI DG+ AGIK A++ + G A+G L+ Sbjct: 136 AGSGGTEAQDWASMLMRMYVRYAERKGYQVEVLEISDGDVAGIKGASIKLIGEYAFGHLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D R+DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRVDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPT +VVQCQ +RSQH+N+A+A ML++++YE EL+KR E E Sbjct: 256 INKTDSAVRITHIPTNIVVQCQSDRSQHRNRAEAMAMLKSRMYEEELRKRNEEKQEMEDG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT+IGWG QIRSYVL + +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 316 KTDIGWGHQIRSYVLDQSR-IKDLRTNHEVGNTQGVLDGDLDDFISASL 363 >gi|15803427|ref|NP_289460.1| peptide chain release factor 2 [Escherichia coli O157:H7 EDL933] gi|12517417|gb|AAG58019.1|AE005519_5 peptide chain release factor RF-2 [Escherichia coli O157:H7 str. EDL933] Length = 365 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 238/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTS SS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSXSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|24638154|sp|Q8ZHK4|RF2_YERPE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|115346673|emb|CAL19556.1| peptide chain release factor 2 [Yersinia pestis CO92] Length = 366 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 184/341 (53%), Positives = 238/341 (69%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G L D+D +RL +N + E P +W A+ L +ER L+ ++ I +++ L D Sbjct: 23 GYLCDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQLEQGLEDVS 82 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E DD ET L+ + ++ +F + SGE D + YL++ AG+GGTE+ Sbjct: 83 GLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQAGSGGTEA 142 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+MLLRMY RWAE R FKTE +E DG+ AG+KSAT+ I G A+GWL+ E GVHRL Sbjct: 143 QDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLRTETGVHRL 202 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 203 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Sbjct: 263 RITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGS 322 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 323 QIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 362 >gi|323526607|ref|YP_004228760.1| peptide chain release factor 2 [Burkholderia sp. CCGE1001] gi|323383609|gb|ADX55700.1| Peptide chain release factor 2 [Burkholderia sp. CCGE1001] Length = 367 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 176/342 (51%), Positives = 247/342 (72%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L G D+D+ +RL +N + EDP +W + A+ L RE++ LD+ + + + + L D Sbjct: 23 LRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLHNDLRDA 82 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A EE D L + Q ++ V +F + + AD N+A+L++ AGAGGTE Sbjct: 83 QDLFEMAREEGDDETLVACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTE 142 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GVHR Sbjct: 143 ACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHR 202 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSA 262 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ KT++GWG Sbjct: 263 VRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWG 322 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 323 HQIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 363 >gi|186476207|ref|YP_001857677.1| peptide chain release factor 2 [Burkholderia phymatum STM815] gi|184192666|gb|ACC70631.1| peptide chain release factor 2 [Burkholderia phymatum STM815] Length = 359 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 171/341 (50%), Positives = 249/341 (73%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D RL +N + EDP++W + A+ L +E++ L+ + + + + L D Sbjct: 16 GGIFDYDAKSVRLIEVNKELEDPNVWNDSQHAQALGKEKKLLEGVVDVLSSLDNDLRDTK 75 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ++A EE+D L +++ ++ VE +F + S AD N+A++++ AGAGGTE+ Sbjct: 76 DLFDMAREENDEDTLVACEEDVAKLTTRVEDMEFRRMFSNPADPNNAFIDIQAGAGGTEA 135 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y R+ E++ FKTE LE +G+ AGIKSAT+ ++G AYG+L+ E G+HRL Sbjct: 136 CDWASMLLRQYLRYCERKGFKTEVLEESEGDVAGIKSATIKVEGEYAYGFLRTETGIHRL 195 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSFSS++VYP +D+S EIE++ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 196 VRKSPFDSSGGRHTSFSSVFVYPEIDESFEIEVNPADLRIDTYRASGAGGQHINKTDSAV 255 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIP+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ K+++GWG Sbjct: 256 RITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQSEQDKLEAGKSDVGWGH 315 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 316 QIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDAFISASL 355 >gi|304414309|ref|ZP_07395677.1| peptide chain release factor 2 [Candidatus Regiella insecticola LSR1] gi|304283523|gb|EFL91919.1| peptide chain release factor 2 [Candidatus Regiella insecticola LSR1] Length = 344 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 178/340 (52%), Positives = 242/340 (71%), Gaps = 1/340 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 G+FD+D +RL ++ + E P +W A+ L +ER L+ + I++++ +L D Sbjct: 2 GIFDYDVKQERLEEVSAELEQPDVWNKPEYAQQLGKERSTLEAIVLTIQQLERQLADVNG 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LL+LA+EE+D + E L+ ++ + +F + SGE DS + YL++ AG+GGTE+Q Sbjct: 62 LLDLAVEENDEATFNEVLAELKAVENNLIQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWANMLLRMY RWA+ + F+TE ++ DG+ AG+KSAT+ I G A+GWL+ E GVHRLV Sbjct: 122 DWANMLLRMYLRWADAKGFQTEIIDSSDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP +DD + IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 182 RKSPFDSGGRRHTSFSSAFVYPEIDDKVNIEINPADLRIDVYRASGAGGQHVNKTESAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Q Sbjct: 242 ITHIPTNIVTQCQNDRSQHKNKDQAMQQLKAKLYEFEMQKKNADKQLQEDNKSDIGWGSQ 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRTN+E + VLDGDLD F++A+L Sbjct: 302 IRSYVLDDAR-IKDLRTNVETRNTQAVLDGDLDKFIEASL 340 >gi|66044558|ref|YP_234399.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae B728a] gi|63255265|gb|AAY36361.1| Peptide chain release factor 2 [Pseudomonas syringae pv. syringae B728a] Length = 329 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 175/326 (53%), Positives = 237/326 (72%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N + EDP++W N A+ L RER L + + E+ L D LL ++ EE+D + + Sbjct: 1 MNRELEDPNVWNNPAYAQELGRERSLLAQIVETLDEMSSGLADAKDLLLMSAEEEDQAAV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + + ++R++ +E +F + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA Sbjct: 61 DDVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 +KR F +E+ GE AGIK AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTS Sbjct: 121 DKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FS+++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ Sbjct: 181 FSAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQN 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH NK A MLRA+LYE E+QKR + E +K++IGWG QIRSYVL + +KD Sbjct: 241 ERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRSYVLDASR-IKD 299 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRTNIE++ VLDGD+D+++ A+L Sbjct: 300 LRTNIERSDCDKVLDGDIDEYLIASL 325 >gi|89072535|ref|ZP_01159107.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34] gi|89051639|gb|EAR57092.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34] Length = 353 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 178/342 (52%), Positives = 239/342 (69%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG FD+D +RL +N + E P +W A+ L +ER L+ + I + + D Sbjct: 9 LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAVVETIDLLDQGVEDV 68 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D E L ++ ++ +F + +G+ D++D YL++ AG+GGTE Sbjct: 69 EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G AYGWL+ E GVHR Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E +K++IGWG Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 309 SQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 349 >gi|90580579|ref|ZP_01236384.1| putative peptide chain release factor 2 [Vibrio angustum S14] gi|90438237|gb|EAS63423.1| putative peptide chain release factor 2 [Photobacterium angustum S14] Length = 353 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 178/342 (52%), Positives = 239/342 (69%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG FD+D +RL +N + E P +W A+ L +ER L+ + I + + D Sbjct: 9 LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERASLEAVVETIDLLDQGVEDV 68 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D E L ++ ++ +F + +G+ D++D YL++ AG+GGTE Sbjct: 69 EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G AYGWL+ E GVHR Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E +K++IGWG Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 309 SQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 349 >gi|296112892|ref|YP_003626830.1| peptide chain release factor 2 [Moraxella catarrhalis RH4] gi|295920586|gb|ADG60937.1| peptide chain release factor 2 [Moraxella catarrhalis RH4] gi|326564445|gb|EGE14672.1| peptide chain release factor 2 [Moraxella catarrhalis 103P14B1] gi|326566640|gb|EGE16781.1| peptide chain release factor 2 [Moraxella catarrhalis 12P80B1] gi|326567583|gb|EGE17698.1| peptide chain release factor 2 [Moraxella catarrhalis BC1] gi|326569431|gb|EGE19491.1| peptide chain release factor 2 [Moraxella catarrhalis BC8] gi|326571371|gb|EGE21386.1| peptide chain release factor 2 [Moraxella catarrhalis BC7] gi|326576569|gb|EGE26476.1| peptide chain release factor 2 [Moraxella catarrhalis 101P30B1] gi|326577414|gb|EGE27298.1| peptide chain release factor 2 [Moraxella catarrhalis O35E] Length = 349 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 185/342 (54%), Positives = 246/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD ++ +RL +N + E+P +W N A + +E+ LD + I + +L D Sbjct: 5 FGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLDDA 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +LELA+E+DD S+L + L VE +F + SGE D+N+ YL++ +G+GGTE Sbjct: 65 AAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMY RW E FK E LE+ +G AGIKSAT+++KG A+GWL+ E GVHR Sbjct: 125 AQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RIDTYR+SGAGGQHVNTTDSA Sbjct: 185 LVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRIDTYRSSGAGGQHVNTTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH PTGVVV CQ ERSQH NK A MLRAKLYELE+QKR E E SK++IGWG Sbjct: 245 VRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E ++ + VL+GDLD F++A+L Sbjct: 305 SQIRSYVLDDSR-IKDLRTGVETSNTTAVLNGDLDKFIEASL 345 >gi|51473471|ref|YP_067228.1| peptide chain release factor 2 [Rickettsia typhi str. Wilmington] gi|51459783|gb|AAU03746.1| peptide chain release factor 2 (RF-2) [Rickettsia typhi str. Wilmington] Length = 340 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 173/332 (52%), Positives = 236/332 (71%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL+ L T DP LW N A++L+RE+ +++ ++ ++ D L L +A E+D Sbjct: 2 RLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNLKSNFEDILELEAMAEVEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 L + + +++ + + E L S E+D N+ +LE++AGAGGTES DWA++++RMY Sbjct: 62 FETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEINAGAGGTESHDWASIMMRMY 121 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+AE+ FKT+ + + +GEE GIKS T+ I G AYGW K E GVHRLVRISP+++ + Sbjct: 122 LRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGK 181 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPT V Sbjct: 182 RMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTNTVT 241 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ +RSQHKNKAQA ML+AKLY+LE+QKR + + ++KT+ WG QIRSYVLQPYQ Sbjct: 242 QCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNANKTDNSWGHQIRSYVLQPYQ 301 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +VKDLRT+ E + VLDG+L++F+ A+LA+ Sbjct: 302 IVKDLRTDYETSDTKGVLDGNLENFVSASLAM 333 >gi|157162351|ref|YP_001459669.1| peptide chain release factor 2 [Escherichia coli HS] gi|166977373|sp|A8A432|RF2_ECOHS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157068031|gb|ABV07286.1| peptide chain release factor 2 [Escherichia coli HS] Length = 365 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 238/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G +D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLCYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|301156116|emb|CBW15587.1| peptide chain release factor RF-2 [Haemophilus parainfluenzae T3T1] Length = 347 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 182/343 (53%), Positives = 245/343 (71%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 C GG+FD+D V+RL +N + E P +W +A+ L +ER L+ + IK ++ L D Sbjct: 2 CFGGIFDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVSLEQVVDTIKNLEQGLED 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+E +D E L ++ ++ +F + SGE D+ D Y+++ AG+GGT Sbjct: 62 VEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+H Sbjct: 122 EAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+S Sbjct: 182 RLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++IGW Sbjct: 242 AVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDDAR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 343 >gi|262277365|ref|ZP_06055158.1| peptide chain release factor 2 [alpha proteobacterium HIMB114] gi|262224468|gb|EEY74927.1| peptide chain release factor 2 [alpha proteobacterium HIMB114] Length = 248 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 167/244 (68%), Positives = 202/244 (82%) Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 +SG+AD D YLEVHAGAGGTESQDWA+M+ +MY +W+EK E + GEEAGIKS Sbjct: 1 MSGDADKFDCYLEVHAGAGGTESQDWADMIRKMYLKWSEKTDRSCELISESKGEEAGIKS 60 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 +T+ I G N++G+LK E GVHRLVRISP+DSN RRHTSF+S+WVYPV+DD IEIEI E D Sbjct: 61 STIKIGGLNSFGYLKNESGVHRLVRISPFDSNQRRHTSFASVWVYPVIDDKIEIEIKEKD 120 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R+DTYR+SGAGGQHVNTTDSAVRITH+PT +VVQCQ ERSQHKNK A ML+++LYEL Sbjct: 121 LRVDTYRSSGAGGQHVNTTDSAVRITHLPTKIVVQCQNERSQHKNKDTAMKMLKSRLYEL 180 Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 EL+KREE A E SKT+IGWG QIRSYVLQPYQ+VKD RTN+E TSP DVL+G++ +F+ Sbjct: 181 ELKKREESAQSAEDSKTDIGWGHQIRSYVLQPYQLVKDNRTNVESTSPDDVLNGEIGEFL 240 Query: 348 KATL 351 ++ L Sbjct: 241 ESAL 244 >gi|50086456|ref|YP_047966.1| peptide chain release factor 2 [Acinetobacter sp. ADP1] gi|49532432|emb|CAG70144.1| peptide chain release factor 2 [Acinetobacter sp. ADP1] Length = 337 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 174/331 (52%), Positives = 236/331 (71%), Gaps = 1/331 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +RL + + EDP +W + A+ + +E+ L+N ++ + + ++L D +L+LA+E D Sbjct: 4 ERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVLNVLDNLAEQLEDAKAMLDLAVEAD 63 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+L + L + E+ +F + S D N Y+E+ AG+GGTE+QDWA+MLLRM Sbjct: 64 DESLLVDVESELATAEDELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRM 123 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RW E+ FK E +E DG+ AGIKSAT+ ++G AYGWL+ E GVHRLVR SP+DS + Sbjct: 124 YMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGN 183 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSFS+++V P +DD+IEIEI+ +D R DTYRASGAGGQH+N TDSAVR+TH PTG+V Sbjct: 184 RRHTSFSAVFVSPEIDDNIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIV 243 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V CQ +RSQH N+ AW LRAKLYELE+ KR E A E SK++IGWG QIRSYVL Sbjct: 244 VACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDS 303 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 304 R-IKDLRTGVENSNTGAVLDGDLDKFIEASL 333 >gi|295676932|ref|YP_003605456.1| hypothetical protein BC1002_1882 [Burkholderia sp. CCGE1002] gi|295436775|gb|ADG15945.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 367 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 176/349 (50%), Positives = 250/349 (71%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + L G D+D+ RL +N + EDP +W + A+ L +E++ LD+ + + I Sbjct: 16 LRKRADDLRGYLDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L ++A EE D L + Q I+ V +F + + AD N+A+L++ Sbjct: 76 TNDVNDAQDLFDMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE +G+ AGIK+AT+ I+G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 316 KTDVGWGHQIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 363 >gi|147732321|sp|Q68X96|RF2_RICTY RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 369 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 174/340 (51%), Positives = 239/340 (70%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D ++ RL+ L T DP LW N A++L+RE+ +++ ++ ++ D L L Sbjct: 23 LDIESLTIRLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNLKSNFEDILELE 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +A E+D L + + +++ + + E L S E+D N+ +LE++AGAGGTES DW Sbjct: 83 AMAEVENDFETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEINAGAGGTESHDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A++++RMY R+AE+ FKT+ + + +GEE GIKS T+ I G AYGW K E GVHRLVRI Sbjct: 143 ASIMMRMYLRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+++ +R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQHVNTTDSAVRIT Sbjct: 203 SPFNAAGKRMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPT V QCQ +RSQHKNKAQA ML+AKLY+LE+QKR + + ++KT+ WG QIR Sbjct: 263 HIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNANKTDNSWGHQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SYVLQPYQ+VKDLRT+ E + VLDG+L++F+ A+LA+ Sbjct: 323 SYVLQPYQIVKDLRTDYETSDTKGVLDGNLENFVSASLAM 362 >gi|30249212|ref|NP_841282.1| peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718] gi|30180531|emb|CAD85140.1| Peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718] Length = 347 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 177/341 (51%), Positives = 244/341 (71%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D RL+ L ++EDP +W + A+ + RE++ L+N + ++ + +L D Sbjct: 4 GGIFDFDAKQIRLTELERQSEDPAIWNDPDRAQEMGREKKSLENIVHTLQSVDRQLRDTH 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL++A EE+D LQ +D++ + + +F + S D N+ ++++ +G+GGTE+ Sbjct: 64 ELLQIAQEENDKETLQSIADDVTELDQTLAGMEFRRMFSDPMDPNNCFVDIQSGSGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML RMY R+ E+R E LE G+ AGIKSATL I G AYG+L+ E GVHRL Sbjct: 124 QDWASMLERMYLRYCERRGLGVELLEESPGDVAGIKSATLKISGEYAYGYLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DT+RASGAGGQH+N TDSAV Sbjct: 184 VRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTFRASGAGGQHINKTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+VVQCQ RSQH+N+A A +L+++LYE EL+KR E E SKT+I WG Sbjct: 244 RITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDIAWGH 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTNIE + VLDGDLD F++A+L Sbjct: 304 QIRSYVLDQSR-IKDLRTNIEIGNTQAVLDGDLDTFIEASL 343 >gi|39546356|ref|NP_461957.2| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|267995195|gb|ACY90080.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|323131397|gb|ADX18827.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 358 Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 187/342 (54%), Positives = 239/342 (69%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL +N + E P +W A+ L +ER L+ + + ++ L D Sbjct: 14 LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMTQGLDDV 73 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE Sbjct: 74 SGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 133 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ E GVHR Sbjct: 134 AQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHR 193 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 194 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 253 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 254 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG 313 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 SQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 354 >gi|292492472|ref|YP_003527911.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4] gi|291581067|gb|ADE15524.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4] Length = 365 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 180/349 (51%), Positives = 239/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L G D+ +RL + + P +W A+ L +ER L + + + Sbjct: 14 LKGRLEALRGYLDFAAKQERLVEVERELAIPSVWNEPERAQRLGQERAQLQAVVGPLAAL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + L ELA+EE D +E S L+ ++ +E +F+ + +GE D N+AYL++ Sbjct: 74 GEEIGQIKELFELAVEEGDEDTAREVSAELETMEQRLEKLEFQRMFAGEMDPNNAYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWANMLLRMY RW EK FKTE E+ GE AGIKSAT+ +G A+GWL+ Sbjct: 134 AGSGGTEAQDWANMLLRMYLRWGEKHGFKTELTEVSAGEVAGIKSATIRFEGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++VYP VD+ I+IEI+ +D RIDTYRA+GAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDERIDIEINPADLRIDTYRAAGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH+P+ +VVQCQ ERSQH+NKA LRAKLYELE++KR+ E + Sbjct: 254 VNRTDSAVRITHLPSNIVVQCQSERSQHQNKAHGMAQLRAKLYELEMRKRQAEKQAAEEA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KADIGWGSQIRSYVLDQSR-IKDLRTGVEMGNTQAVLDGDLDLFIEASL 361 >gi|331007552|ref|ZP_08330709.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium IMCC1989] gi|330418642|gb|EGG93151.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium IMCC1989] Length = 347 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 173/343 (50%), Positives = 243/343 (70%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 CLGG+FD+D ++L+ + + +P +W + A+ L +ER L+ + I+ + + D Sbjct: 2 CLGGIFDYDAKQEQLAEVELELAEPEVWNDPARAQALGQERASLEAIVGTIQTLDTGVVD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LL++A+EE D SIL + D + + ++ +F + SGE D+N+AYL++ +G+GGT Sbjct: 62 ARELLDMAVEEGDESILIDVQDEIDVLSAQLGKLEFRRMFSGETDANNAYLDIQSGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA M+LRMY RW E R FKT E G+ AGIKSAT+ +G A+GWL+ E GVH Sbjct: 122 EAQDWAEMVLRMYLRWGEARGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS+SRRHTSF S++V P +DD+ E+++ +S+ R DTYRASGAGGQHVN TDS Sbjct: 182 RLVRKSPFDSSSRRHTSFCSVFVSPEIDDNFEVDVDKSEVREDTYRASGAGGQHVNKTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH +G+VVQCQ +RSQH+N+ AW MLRA+LYE ELQ+R E +K++IGW Sbjct: 242 AVRLTHEASGIVVQCQSQRSQHQNRDTAWKMLRARLYEQELQRRNADKQAQEDNKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL Q +KDLRTN++ ++ VLDG LD F++A+L Sbjct: 302 GSQIRSYVLDD-QRIKDLRTNVQTSNCQAVLDGSLDQFIEASL 343 >gi|114331309|ref|YP_747531.1| peptide chain release factor 2 [Nitrosomonas eutropha C91] gi|114308323|gb|ABI59566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosomonas eutropha C91] Length = 348 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 178/345 (51%), Positives = 243/345 (70%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D RL+ L ++EDP +W + A+ L RE++ L+N + ++ I +L Sbjct: 1 MKFYGGIFDFDAKQVRLTELERQSEDPAIWNDPARAQELGREKKSLENIVFTLRSIDRQL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LL++A EE D L S+++ + VE +F + S D N+ ++++ +G+G Sbjct: 61 QDAQELLQIAQEESDDETLHSISEDVAGLAKTVEEMEFHRMFSDPMDPNNCFIDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+ML RMY + E+R E LE G+ AGIKSAT+ + G AYG+L+ E G Sbjct: 121 GTEAQDWASMLERMYLHYCERRGLAVELLEESPGDVAGIKSATIKVSGEYAYGYLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N T Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTYRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+VVQCQ RSQH+N+A A +L+++LYE EL+KR E E SKT+I Sbjct: 241 DSAVRITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYVL + +KDLRTNIE + VLDGDLD F++A+L Sbjct: 301 AWGHQIRSYVLDQSR-IKDLRTNIEVGNTQAVLDGDLDVFIEASL 344 >gi|260887225|ref|ZP_05898488.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] gi|260863287|gb|EEX77787.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] Length = 330 Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 175/323 (54%), Positives = 227/323 (70%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N EA+ + +E + ++ KEI + D LLE+ALEE+D S+ E Sbjct: 3 EPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMALEENDTSLEPEVQTE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + IK V + E LLSG D+N+A L +HAGAGGTE+QDW MLLRMY RWAE+ F Sbjct: 63 FETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFS 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 ++ G+EAG+KSATL I G NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+ + Sbjct: 123 VVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSACDI 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD++E+ I+ +D R+DTYRASGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ + Sbjct: 183 MPEIDDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQLQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ Q MLRAKL+ELE +K+E E + +I WG QIRSYV QPY MVKD+RT +E Sbjct: 243 NREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYTMVKDMRTGME 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGDLD F++A LA K Sbjct: 303 TGNVQAVMDGDLDAFIEAFLAAK 325 >gi|887841|gb|AAA83072.1| peptide chain release factor 2 (RF-2) [Escherichia coli] Length = 365 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 182/349 (52%), Positives = 236/349 (67%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH Sbjct: 194 TETGVHRXVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK Q ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQXMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|297539161|ref|YP_003674930.1| peptide chain release factor 2 [Methylotenera sp. 301] gi|297258508|gb|ADI30353.1| peptide chain release factor 2 [Methylotenera sp. 301] Length = 351 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 174/343 (50%), Positives = 242/343 (70%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD++ QRL +N EDP +W + +++ L +E++ L+ + ++ ++ L D Sbjct: 6 TLGGIFDFETKSQRLEEVNGLLEDPKVWDDNKKSQALGKEKRALELVVHSLQAVESSLND 65 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + L E+A EE+D L + Q ++ +V +F + SGE DSN+ ++E +G+GGT Sbjct: 66 SRELFEMAREENDDDTLLSVDVDSQAVEKQVAEMEFRRMFSGELDSNNCFIEFQSGSGGT 125 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA MLLRMY R+ E++ FK E LE DG+ AGIK A++ + G AYG L+ E GVH Sbjct: 126 EAQDWAAMLLRMYLRYCERKGFKVEVLEESDGDVAGIKGASIKVTGDYAYGTLRTENGVH 185 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DSN++RHTSF+S+ ++P VDDSI+I+I+ +D RIDTYRASGAGGQH+N TDS Sbjct: 186 RLVRKSPFDSNAKRHTSFASVQIFPEVDDSIQIDINPADLRIDTYRASGAGGQHINKTDS 245 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT VVQCQ +RSQH+N+ +A NML+ LY LEL KR E +KT+IGW Sbjct: 246 AVRITHLPTNTVVQCQNDRSQHRNRDEAMNMLKGALYNLELNKRNADKQALEDAKTDIGW 305 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL + +KDLRTN+E + VLDGDLD F++ +L Sbjct: 306 GHQIRSYVLDQGR-IKDLRTNVEIGNTQGVLDGDLDPFIQVSL 347 >gi|253701853|ref|YP_003023042.1| hypothetical protein GM21_3258 [Geobacter sp. M21] gi|251776703|gb|ACT19284.1| conserved hypothetical protein [Geobacter sp. M21] Length = 371 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 176/347 (50%), Positives = 242/347 (69%), Gaps = 1/347 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +++ L G + D+ +R+ L T P W + A+ ++R R ++ ++ + Sbjct: 11 ELAERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTIWES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL EE D + L E + +++ V +F +LSG D++ A++ + Sbjct: 71 LDKQARDIQELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTESQDWA MLLRMY R+ EK+ +KTE + +G+ AG+K T + G AYG+L Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGG 240 K E G+HRLVRISP+DS++RRHTSF+S +V+PV++ D IEI+I+ESD RIDTYR+SGAGG Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEDDIEIKIAESDLRIDTYRSSGAGG 250 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A +LR+KLYE+EL++RE A+ Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K EIGWG QIRSYVL PY+MVKDLRT +E P VLDG LDDF+ Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGKPDAVLDGALDDFV 357 >gi|300312096|ref|YP_003776188.1| peptide chain release factor 2 [Herbaspirillum seropedicae SmR1] gi|300074881|gb|ADJ64280.1| peptide chain release factor 2 (RF-2) protein [Herbaspirillum seropedicae SmR1] Length = 337 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 174/331 (52%), Positives = 241/331 (72%), Gaps = 1/331 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++L +N + EDP++W + A+ L +E++ L+ + + +I L D L E+A EE Sbjct: 4 EKLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELTDARDLFEMAREEK 63 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + + +K VE +F + SG D+N+ ++++ AGAGGTE+QDWA+MLLR Sbjct: 64 DEDTIIAIEGDAENLKKMVEEMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQ 123 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R+ E++ FK E LE DGE AGIK+AT+ ++G AYG+L+ E GVHRLVR SP+DS++ Sbjct: 124 YLRYCERKGFKAEILEQSDGEVAGIKTATIKVEGEYAYGFLRTETGVHRLVRKSPFDSSN 183 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RHTSFSS++VYP VD+S EIEI+ +D R+DTYRASGAGGQH+N TDSAVR+TH P+G+V Sbjct: 184 GRHTSFSSLFVYPEVDESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSGIV 243 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ +RSQH+N+A+AW+MLRAKL+ELEL+KR E SKT++GWG QIRSYVL Sbjct: 244 VQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVLDQS 303 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +KDLRTN E + VLDGD+DDF+ A+L Sbjct: 304 R-IKDLRTNFETGNTKAVLDGDIDDFIAASL 333 >gi|237751447|ref|ZP_04581927.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879] gi|229372813|gb|EEO23204.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879] Length = 367 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 177/352 (50%), Positives = 242/352 (68%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + D+ +RL +N W + +A + +E++ + +S E+ Sbjct: 13 LQNKAQNIAKILNPDSLQKRLDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L E+A E D S L+ +N++ ++ ++ + E +LSGE DS +A + + Sbjct: 73 KAELDDARELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSTNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RW+E+R FK E L+ DGEEAGIK A +IKG NAYG+ K Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDYQDGEEAGIKGAAFIIKGENAYGYAK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGES 301 VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A ML++KLYELE L++ E +AN + Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSEGVAN---A 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+EIGWG QIRSYVL PYQ VKDLR+N + VLDGD+DD +++ L + Sbjct: 310 EKSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTDGVLDGDIDDLIESVLVL 361 >gi|257092654|ref|YP_003166295.1| peptide chain release factor 2 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045178|gb|ACV34366.1| peptide chain release factor 2 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 347 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 173/345 (50%), Positives = 243/345 (70%), Gaps = 2/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++C GG+FD+D +L + + EDP +W N A+ L RER+ L+N + + + D L Sbjct: 1 MSC-GGIFDYDQKADQLKTVARELEDPAVWDNAERAQELGRERRSLENVVLTLNRVADSL 59 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L +A EEDD L + ++ I+ EV +F + + AD + ++++ AGAG Sbjct: 60 RDTGELFAMAREEDDDETLNAVAADIDGIEKEVSGLEFRRMFNNPADPLNCFVDIQAGAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA MLLRMY R+AE++ + E LE +GE AGIK+A++ I G AYG L+ E G Sbjct: 120 GTEAQDWAAMLLRMYLRYAERKGYAVEVLEESEGEVAGIKTASIKISGEYAYGMLRSETG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSF S+ YP +DDS E+EI+ ++ RIDTYRASGAGGQH+N T Sbjct: 180 IHRLVRKSPFDSNARRHTSFCSVSAYPEIDDSFEVEINPAELRIDTYRASGAGGQHINKT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PT +VVQCQ +RSQH+N+A+A ML++++YE E++KR+ E +K++I Sbjct: 240 DSAVRITHLPTNIVVQCQNDRSQHRNRAEAMAMLKSRIYEAEMRKRQTEQQKLEDAKSDI 299 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRTN+E + VLDGDLD F++A+L Sbjct: 300 GWGHQIRSYVLDQSR-IKDLRTNVEVGNTQGVLDGDLDQFIEASL 343 >gi|56478734|ref|YP_160323.1| peptide chain release factor 2 [Aromatoleum aromaticum EbN1] gi|81598559|sp|Q5NZU2|RF2_AZOSE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|56314777|emb|CAI09422.1| peptide chain release factor 2 (RF-2),gene containing programmed frameshift site [Aromatoleum aromaticum EbN1] Length = 367 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 177/338 (52%), Positives = 238/338 (70%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +L + EDP +W N +A+ L +E++ L++ + +++I+ D L Sbjct: 27 LDYDEKSSKLEEVTRALEDPAVWNNAEKAQELGKEKRQLEDVVHNLRDIESLSSDLKDLF 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +LA EDD L ++ ++ +V +F + S D N ++E+ AGAGGTE+QDW Sbjct: 87 DLAEAEDDEDTLAAVEADIGELQAKVHALEFRRMFSNPMDPNPCFIEIQAGAGGTEAQDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY R+ E++ F E +E +GE AGIK AT+ + G AYG+L+ E G+HRLVR Sbjct: 147 AGMLERMYLRYCERKGFNVELMEESEGEVAGIKGATIKVSGDYAYGFLRTETGIHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RRHTSFSS++VYP VDDSI+I+I+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSNARRHTSFSSVFVYPEVDDSIQIDINPADLRIDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTGVVVQCQ +RSQHKNKA+A +ML+A+LYELEL+KR+ E SK++IGWG QIR Sbjct: 267 HEPTGVVVQCQNDRSQHKNKAEAMSMLKARLYELELRKRQSEQQKLEDSKSDIGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 327 SYVLDQSR-IKDLRTNFEVGNTQAVLDGDLDDFIAASL 363 >gi|148652647|ref|YP_001279740.1| peptide chain release factor 2 [Psychrobacter sp. PRwf-1] gi|148571731|gb|ABQ93790.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter sp. PRwf-1] Length = 325 Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 172/319 (53%), Positives = 227/319 (71%), Gaps = 1/319 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P LW + A + +E+ LD I+ I + L D +LELA+E DD +L+E + L Sbjct: 4 PELWNDPERATKISKEKSQLDAVITTITGLDTTLEDAAAMLELAVEADDEGLLEEVQNEL 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + VE +F+ + GE D+N+ ++++ +G+GGTE+QDWA MLLRMYTRW E FK Sbjct: 64 NAAQALVEDLEFKRMFDGEMDANNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHGFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E +E+ G AG+KSA+ + G A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V Sbjct: 124 EIIEVSAGSVAGVKSASFKVSGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAVFVS 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD EI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PTG VVQCQ ERSQH N Sbjct: 184 PEIDDDFEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTGTVVQCQNERSQHGN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 KA A MLRAKLYELE+QKR E E +K+++GWG QIRSYVL + +KDLRT +E Sbjct: 244 KATAMKMLRAKLYELEMQKRMEQQQAVEDNKSDVGWGSQIRSYVLDDSR-IKDLRTGVET 302 Query: 333 TSPSDVLDGDLDDFMKATL 351 + VLDGDLD F++A+L Sbjct: 303 FNTGAVLDGDLDQFIEASL 321 >gi|261855042|ref|YP_003262325.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2] gi|261835511|gb|ACX95278.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2] Length = 365 Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 175/349 (50%), Positives = 246/349 (70%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL ++ + E P +W + A+ L +ER L+ + + + Sbjct: 14 LSARAAALRGYLDFDVKKERLEEVDRELEVPDVWNDPARAQALGKERASLERVVHTLANM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN LLE+A EEDD + + ++ + ++ +F + SGE D ++AYL++ Sbjct: 74 AQGLNDNADLLEMAAEEDDEATVASIEKDVVEFEKQIADLEFRRMFSGEMDESNAYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA++L+RMY RW ++R FKTE +E+ DGE AGIKSAT+ +G A+GWL+ Sbjct: 134 SGAGGTESQDWASILMRMYLRWGDRRGFKTEVMEMSDGEVAGIKSATIRFEGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEIE++ +D R+D +RASGAGGQH Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFASVFVSPEVDDNIEIEVNPADLRVDVFRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVR TH+PTGVVV CQ ERSQ +N+ +A ML+AKLYELE+QKR ++ E + Sbjct: 254 VNRTESAVRFTHLPTGVVVACQAERSQIQNRERAMKMLKAKLYELEVQKRNAVSQALEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+++ WG QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 314 KSDVSWGNQIRSYVLDQSR-IKDLRTGHETGNTQAVLDGDLDPFIEASL 361 >gi|157827015|ref|YP_001496079.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389] gi|157802319|gb|ABV79042.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389] Length = 285 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 171/279 (61%), Positives = 215/279 (77%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A E+D I+Q+ +LQ + + E L SGEADSN+ +LE++AGAGGTES DWA Sbjct: 1 MAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEINAGAGGTESHDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGWLK E GVHRLVRIS Sbjct: 61 SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWLKTEAGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRS Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVLQPYQMVKDLRT+ E + VLDGDL++F+ A+LA+ Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 279 >gi|78047471|ref|YP_363646.1| peptide chain release factor 2 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123585257|sp|Q3BUB7|RF2_XANC5 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|78035901|emb|CAJ23592.1| peptide chain release factor 2 [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 374 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 182/349 (52%), Positives = 245/349 (70%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G+FD+D +RL ++ + E P +W + A+ L RER L+ + I ++ Sbjct: 14 LNDRVLSLRGIFDYDAKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA E D +L + VE +F+ + SG+ DS +A++++ Sbjct: 74 LSGLADAGDLLELAESEQDEDTALAVIADLDNYQAHVEKLEFQRMFSGQMDSANAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+ GE AGIKSAT+ I+G AYGWLK Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVRIEGEYAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT VV CQ RSQH+N+ A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNAEKDALEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIR+YVL + +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 361 >gi|217970376|ref|YP_002355610.1| peptide chain release factor 2 [Thauera sp. MZ1T] gi|217507703|gb|ACK54714.1| conserved hypothetical protein [Thauera sp. MZ1T] Length = 367 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 178/338 (52%), Positives = 237/338 (70%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +L +N EDP +W N A+ L +E++ L++ + +++I + D L Sbjct: 27 LDYDVKASKLEEVNRALEDPAVWNNAERAQELGKEKRQLEDVVLTLQKIDAQSRDLKDLF 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA EDD + +L ++ +E +F + S D N+ ++E+ AGAGGTE+QDW Sbjct: 87 ELAEAEDDDDTFEAVEADLVELQGAIEKLEFRRMFSNPMDPNNCFIEIQAGAGGTEAQDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY R+ EK+ F E +E +GE AGIK+ T+ G AYG+L+ E G+HRLVR Sbjct: 147 AGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFSGEYAYGYLRTETGIHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQHKNKA+A +ML+A+LYE EL+KR+ E SK++IGWG QIR Sbjct: 267 HEPTGIVVQCQNDRSQHKNKAEAMSMLKARLYEAELRKRQSEQQKLEDSKSDIGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 327 SYVLDQSR-IKDLRTNYEVGNTQAVLDGDLDDFIGASL 363 >gi|187478021|ref|YP_786045.1| peptide chain release factor 2 [Bordetella avium 197N] gi|123515203|sp|Q2L224|RF2_BORA1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|115422607|emb|CAJ49132.1| peptide chain release factor 2 [Bordetella avium 197N] Length = 367 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 170/338 (50%), Positives = 245/338 (72%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +RL +N + EDP +W + A+ L RE++ L++ + + E+ + D L L Sbjct: 27 LDYDAKTERLHVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVQTLTELGQGVADALELF 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA ++D + L+ ++ + +E +F + S AD + +L++ AGAGGTE+QDW Sbjct: 87 ELAAADEDDATLESIENDANTFQERLEGLEFRRMFSNPADPLNCFLDIQAGAGGTEAQDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLR Y ++AE++ FK E LE +GE AGIKSAT+ ++G A+G+L+ E GVHRLVR Sbjct: 147 ASMLLRQYLKYAERKGFKAEVLEESEGEIAGIKSATIKLEGEYAFGYLRTETGVHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS+ RHTSF+S++VYP VD+S E+E++ +D R+DTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++KR E SKT++GWG QIR Sbjct: 267 HMPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRKRMAEQQKLEDSKTDVGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 327 SYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363 >gi|319943696|ref|ZP_08017977.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599] gi|319742929|gb|EFV95335.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599] Length = 359 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 178/341 (52%), Positives = 240/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D RL+ +N+ E P +W + A L +E++ LDN + I+++ L D Sbjct: 16 GGIFDFDEKKNRLTEVNSALEAPDIWNDAAAALELGKEKRALDNVVGTIEQLTGSLSDTR 75 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+A+ E+D + L+E I+ VE +F + S AD +LE+ AGAGGTE+ Sbjct: 76 DLYEMAVAENDDATLEELERESLGIEKGVEGLEFRRMFSNPADPGPCFLEIQAGAGGTEA 135 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA MLLR Y R+ E+R F T LE +G+ AGIK ATL ++G AYG+L+ E G+HRL Sbjct: 136 CDWAAMLLRQYLRYCERRGFTTTLLEESEGDVAGIKGATLKVEGEYAYGYLRTETGIHRL 195 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP VDDSIE++I+ +D RID YRASGAGGQHVN T+SAV Sbjct: 196 VRKSPFDSSGGRHTSFASVYVYPEVDDSIEVDINPADLRIDVYRASGAGGQHVNKTESAV 255 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQH+N+ +A MLRA+L+ELEL+KR+ + E+SKT+IGWG Sbjct: 256 RITHLPTNTVVQCQNDRSQHRNRDEAMKMLRARLFELELRKRQAEQDKVEASKTDIGWGH 315 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN E ++ VLDGDLDDF+ +L Sbjct: 316 QIRSYVLDQSR-IKDLRTNFETSNTKAVLDGDLDDFIAESL 355 >gi|309973325|gb|ADO96526.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae R2846] Length = 365 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 184/351 (52%), Positives = 250/351 (71%), Gaps = 1/351 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + LS + + L G D+D V+RL +N + E P +W + +A+ L +ER L+ ++ IK Sbjct: 12 IDLSDRTSVLRGYLDFDAKVERLEEVNAELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L D LLELA+E +D E L ++ ++E +F + SGE D+ D Y++ Sbjct: 72 NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GW Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 312 DNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 361 >gi|291613970|ref|YP_003524127.1| hypothetical protein Slit_1503 [Sideroxydans lithotrophicus ES-1] gi|291584082|gb|ADE11740.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1] Length = 367 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 177/349 (50%), Positives = 250/349 (71%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + N L D+D+ +RL+ +N EDP +W + A+ L RER+ L++ + + I Sbjct: 16 LRNRSNELRRFLDFDSKQERLAEVNQLAEDPAIWNDAKRAQELGRERKSLEDVVLGLIRI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D L E+A E+D L + ++Q I+ V +F + S AD N+ ++++ Sbjct: 76 SQNLDDAAELFEMAQAENDDDSLNSIAADVQDIETRVAALEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE DG+ AGI+SA+L ++G AYG L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKVEVLEQTDGDVAGIRSASLKVEGEYAYGHLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++V P VDDSIE++I+ +D RIDT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVSPEVDDSIEVDINPADLRIDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSA+RITH PTG+VVQCQ +RSQH+NKA+A +ML+++LYELEL+KR+ A+ E+S Sbjct: 256 INKTDSAIRITHQPTGIVVQCQNDRSQHRNKAEAMSMLKSRLYELELRKRQSEADKLEAS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIEASL 363 >gi|303257507|ref|ZP_07343519.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47] gi|302859477|gb|EFL82556.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47] Length = 348 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 173/345 (50%), Positives = 244/345 (70%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D +RL +N EDP +W + A+ L +E++ L++ + IK + L Sbjct: 1 MKSCGGIFDYDQKERRLEEVNQALEDPSIWSDQERAQQLSKEKKRLEDVVLTIKHLTTGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L L E+A EEDD + L+ ++ +K EVE+ +F+ + + E D + +LE+ AGAG Sbjct: 61 SDALELFEMAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+ML RMY ++AE++ FK E +E +G+ AGIK T+ I G AYGWL+ E G Sbjct: 121 GTEAQDWASMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+ T Sbjct: 181 IHRLVRKSPFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+V Q RSQH+NK +A +L+++LYE EL+KR+ E +K++I Sbjct: 241 DSAVRITHIPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYVL + VKDLRTN+E + + VLDG L+ F++A+L Sbjct: 301 SWGHQIRSYVLDQSR-VKDLRTNVETGNTTAVLDGALESFIEASL 344 >gi|322420980|ref|YP_004200203.1| peptide chain release factor 2 [Geobacter sp. M18] gi|320127367|gb|ADW14927.1| Peptide chain release factor 2 [Geobacter sp. M18] Length = 371 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 174/346 (50%), Positives = 245/346 (70%), Gaps = 1/346 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L GLFD D+ +R+ L+ T P W + A+ +++ R ++ ++ + + Sbjct: 12 LVERIDKLRGLFDVDDKKERMQELDELTNRPDFWNDAENAQKVLKARTAMEKDVTAWENL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+EL EE+D + L E + ++ V +F +LSG D++ A++ ++ Sbjct: 72 DRQARDIRELIELGSEEEDEATLAEVAAMNAELENGVSQAEFRRMLSGPHDASGAFVSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA MLLRMY R+ EK+ ++TE + +G+ AGIK T G AYG+LK Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCEKKGWRTEITDYQEGDGAGIKGVTFAATGEFAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241 + G+HRLVRISP+DS++RRHTSF+S++V+PV+++ IE++I+ESD RIDTYR+SGAGGQ Sbjct: 192 ADAGIHRLVRISPFDSSARRHTSFASVFVFPVIEEEDIEVKIAESDLRIDTYRSSGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSA+RITH+PTG+VV CQ ERSQH NKA A +LR+KLYE+EL++RE A+ Sbjct: 252 HVNTTDSAIRITHLPTGIVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG LDDF+ Sbjct: 312 EKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALDDFV 357 >gi|16761822|ref|NP_457439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143309|ref|NP_806651.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414987|ref|YP_152062.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363916|ref|YP_002143553.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|61230204|sp|P0A289|RF2_SALTY RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|61230205|sp|P0A290|RF2_SALTI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|76363351|sp|Q5PJG1|RF2_SALPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|238690721|sp|B5BFK6|RF2_SALPK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|25299688|pir||AG0871 peptide chain release factor 2 (RF-2) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|154276|gb|AAA72914.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16504124|emb|CAD02871.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Typhi] gi|29138943|gb|AAO70511.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129244|gb|AAV78750.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095393|emb|CAR60952.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 365 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 187/349 (53%), Positives = 240/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + N L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|224438340|ref|ZP_03659267.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818] gi|313144782|ref|ZP_07806975.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818] gi|313129813|gb|EFR47430.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818] Length = 365 Score = 359 bits (922), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 176/352 (50%), Positives = 243/352 (69%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + D+ +R+ +N W + +A + +E++ + +S E+ Sbjct: 13 LQNKAQNIAKILNPDSLQKRMDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L E+A E D S L+ +N++ ++ ++ + E +LSGE DS++A + + Sbjct: 73 KAELDDAKELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSSNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RW+E+R FK E L+ DGEEAGIK A +IKG NAYG+ K Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDHQDGEEAGIKGAAFIIKGENAYGYAK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGES 301 VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A ML++KLYELE L++ E +AN + Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSEGVAN---A 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+EIGWG QIRSYVL PYQ VKDLR+N + VLDGD+DD +++ L + Sbjct: 310 EKSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTEGVLDGDIDDLIESVLVL 361 >gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941] gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter xylanophilus DSM 9941] Length = 366 Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 182/349 (52%), Positives = 240/349 (68%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++L+ L FD +R + L+ + P W + AK + E ++ + ++E+ Sbjct: 11 LSQRLDELEAFFDVGRLRERAARLSEEMSRPGFWDDPDRAKGVAAEFSRTEDRLKLMEEL 70 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D+ LLELA E D +L+E L+ I+ +E ++ L +GE D DA L ++ Sbjct: 71 RGRLEDSSELLELA--EGDRELLEEVERELEGIERRIEEQEVARLFTGEYDEGDAILTIN 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG +SQDWA ML RMY RWAE+R F E +E +GEEAGIKSAT + GP A+G L Sbjct: 129 SGAGGVDSQDWAEMLARMYRRWAERRGFGLEVIEYTEGEEAGIKSATFSVSGPYAFGLLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D++SRRHTSF+S+ V P +DD++E+EI E D ++DTYRASGAGGQH Sbjct: 189 AERGVHRLVRISPFDASSRRHTSFASVAVAPAIDDAVEVEIDEKDLKVDTYRASGAGGQH 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH+PTG+VVQCQ ERSQH+N+ A +L+A+L+ELE +KRE+ Sbjct: 249 VNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLKARLFELEREKREQEIAAQSGE 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K EIGWG QIRSYVL PY+MVKDLRT E VLDGDLD F+ A L Sbjct: 309 KAEIGWGSQIRSYVLHPYRMVKDLRTGEETGDVDRVLDGDLDRFIYAYL 357 >gi|1172913|sp|P43918|RF2_HAEIN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|309751145|gb|ADO81129.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae R2866] Length = 365 Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 184/351 (52%), Positives = 250/351 (71%), Gaps = 1/351 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + LS + + L G D+D V+RL +N + E P +W + +A+ L +ER L+ ++ IK Sbjct: 12 IDLSDRTSVLRGYLDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L D LLELA+E +D E L ++ ++E +F + SGE D+ D Y++ Sbjct: 72 NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GW Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 312 DNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 361 >gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila simulans] gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi] gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila simulans] gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi] Length = 336 Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 169/332 (50%), Positives = 238/332 (71%), Gaps = 1/332 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L+++ + +LWQ+ +A+ +++ER + N + +++ D + L++ A++E+D Sbjct: 2 RLEELDSQASNDNLWQDNQKAQEILKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E + L +++ ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY Sbjct: 62 EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 RWAE FK E +E +GE GIKSA + I G AYGW K E G+HRLVRISP+D+N Sbjct: 122 VRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ RSQH+NK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ PY Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QMVKDLRT E + + V DG++D F+ + L Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLT 333 >gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus AHT2] gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2] Length = 368 Score = 359 bits (921), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 177/349 (50%), Positives = 240/349 (68%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D DN + R+ L ++ P+ W N A + +E+ L + I +++ Sbjct: 16 LQGRLQTLRSHLDLDNKLLRIQELEHRSAAPNFWDNPEAAAGVQKEQSDLQDTIDNWQQV 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D D +LLELA+ E+D QE S L ++ + + E + +GE D+++A L +H Sbjct: 76 IDSFEDAEVLLELAIAENDHETEQEVSRALNSVEQRLAAMELECMFNGEHDASNAMLTIH 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW ++LLRMY RWAEK+ F TE L+ G+EAG KS T+L+KG AYG+L+ Sbjct: 136 AGAGGTEAQDWTDILLRMYLRWAEKKGFSTEILDHLPGDEAGTKSVTVLVKGRWAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+D+ RRHTSF+S++++P +DD+IE+EI++ D RIDTYRASGAGGQH Sbjct: 196 SEMGIHRLVRISPFDTGGRRHTSFASVFIFPELDDNIEVEINDKDLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SA+RITH+P+G+VVQCQ ERSQH+NK A ML+A+LYE E R+E Sbjct: 256 VNKTSSAIRITHLPSGIVVQCQNERSQHRNKDTAMKMLKAQLYERERANRKEEQQHLHGD 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K EI WG QIRSYVLQPY++VKD RTN E + +VLDGDLD F+ + L Sbjct: 316 KKEIAWGSQIRSYVLQPYRLVKDHRTNHETGNVDNVLDGDLDPFIISYL 364 >gi|254458681|ref|ZP_05072105.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1] gi|207084447|gb|EDZ61735.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1] Length = 369 Score = 359 bits (921), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 183/353 (51%), Positives = 241/353 (68%), Gaps = 10/353 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++N + G+ + D RL + D W + A + +E+ L + Sbjct: 13 LNLKMNNITGVVEPDKLTSRLEEIEELENDQDFWNDADNAAKIQKEKTQLQRKLDKYSIA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 +D + D L L E+A EE+D ++ + +L+++ L +E E LLSGE DSN+A L Sbjct: 73 KDAITDALELYEMAKEENDEDSIELCFSDASDLEQLILNME---VEVLLSGETDSNNAIL 129 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 +H GAGGTESQDWA MLLRMY RWAE+ F E L+ G+EAGIK A++LIKG NAYG Sbjct: 130 SIHPGAGGTESQDWAEMLLRMYKRWAERHGFGVEVLDYQVGDEAGIKDASILIKGENAYG 189 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E G+HRLVRISP+DSN++RHTSFSS+ V P +DD I I + + D RIDTYRASGAG Sbjct: 190 YLKVENGIHRLVRISPFDSNAKRHTSFSSVMVSPEIDDDINIVVEDKDIRIDTYRASGAG 249 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANI 298 GQHVN T+SA+RITHI T V+VQCQ +RSQHKNKA A MLR++LYELEL ++ EIA I Sbjct: 250 GQHVNKTESAIRITHIATNVIVQCQNDRSQHKNKATAMKMLRSRLYELELAAQKAEIAGI 309 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K+EIGWG QIRSYV+QPYQ VKD R+N ++ S +LDGD+D ++ L Sbjct: 310 ---AKSEIGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDKMIEGVL 359 >gi|152980486|ref|YP_001352951.1| peptide chain release factor 2 [Janthinobacterium sp. Marseille] gi|166223628|sp|A6SXF4|RF2_JANMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151280563|gb|ABR88973.1| RF-2 peptide chain release factor [Janthinobacterium sp. Marseille] Length = 367 Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 177/338 (52%), Positives = 241/338 (71%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D ++L +N + EDP +W + A+ L +E++ L+ + + +I L D L Sbjct: 27 LDFDVKSEKLDQVNGELEDPDVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELNDARDLF 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+A EE D + ++ Q + VE +F + S D+N+ ++++ AGAGGTE+QDW Sbjct: 87 EMAREEKDEDTIVAIENDAQELLKLVEGMEFRRMFSNPMDANNCFIDIQAGAGGTEAQDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLR Y R+ E++ FK E LE DGE AGIK+ATL ++G AYG+L+ E GVHRLVR Sbjct: 147 ASMLLRQYLRYCERKGFKVEILEQSDGEVAGIKTATLKVEGDYAYGFLRTETGVHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS + RHTSFSS++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVR+T Sbjct: 207 SPFDSANGRHTSFSSLFVYPEVDDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVRLT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H P+G+VVQCQ +RSQH+NKA+AW+ML+AKL+ELE++ R E SKT++GWG QIR Sbjct: 267 HGPSGIVVQCQNDRSQHRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 327 SYVLDQSR-IKDLRTNFETGNTKAVLDGDLDDFIAASL 363 >gi|71153099|sp|Q7VNG1|RF2_HAEDU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 365 Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 174/349 (49%), Positives = 240/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + G D+D V+RL +N + E P +W +A+ L +ER L+ ++ I + Sbjct: 14 LTERTQLIRGYLDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINAL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+ELA+E +D L E + ++ +F+ + SG D+ D YL++ Sbjct: 74 IQGIEDVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+P+G+VVQCQ RSQH+NK Q LRAKLYE+E+ K+ E + Sbjct: 254 VNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEEN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 361 >gi|118594576|ref|ZP_01551923.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181] gi|118440354|gb|EAV46981.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181] Length = 355 Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 173/348 (49%), Positives = 243/348 (69%), Gaps = 1/348 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ L GG FD + + + L+ + EDP W + ++ + +E++ L++ + + Sbjct: 5 TKNLIPCGGFFDLEEKKRTIKLLSIQQEDPKTWSDRALSQKIGKEKKVLEDIVHQADSLI 64 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L DN L ++A+EE+D + L + ++++ V+ +F+ + S D N+ +++ + Sbjct: 65 SDLADNQELFDMAVEENDLNTLTTIKSDTEKLEKSVDDIEFKRMFSHPMDPNNCFVDFQS 124 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWANML RMYTR+AE++ FK E LE +GE AGIK ATL I G A+G+L+ Sbjct: 125 GSGGTEAQDWANMLFRMYTRYAERKNFKIEVLEYTEGEVAGIKGATLKIIGDYAFGFLRT 184 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRLVR SP+DS SRRHTSF+ + VYP +D+SI+I+I+ SD RIDTYRASGAGGQH+ Sbjct: 185 ESGIHRLVRKSPFDSGSRRHTSFAGVNVYPEIDESIDIDINPSDLRIDTYRASGAGGQHI 244 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVRITH+PT VVQCQ +RSQH+NKAQA NML+A+LY +EL KR E E +K Sbjct: 245 NKTDSAVRITHVPTNTVVQCQNDRSQHRNKAQAMNMLKAQLYAIELSKRNEEKQAMEDAK 304 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 T+IGWG QIRSYVL + +KDLRTN+E + VLDGDLD F+ +L Sbjct: 305 TDIGWGHQIRSYVLDQSR-IKDLRTNLEVGNTQGVLDGDLDMFISESL 351 >gi|330719765|gb|EGG98281.1| Peptide chain release factor [gamma proteobacterium IMCC2047] Length = 365 Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 179/350 (51%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + L G D+ RL + + ED +W A+ L +ER L+N ++ I Sbjct: 13 ELQERTDVLRGYLDYAEKKDRLEEVERELEDSAVWDEPERAQALGKERSQLENIVATIDR 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D LL +A+EEDD + E S ++ + ++ +F + SGE D N A+L++ Sbjct: 73 LDSGISDGHELLAMAIEEDDEDTVNEVSAEIETLDAQLAKLEFRRMFSGEMDENSAFLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA MLLRMY RW E++ FK E +E+ G+ AGIK AT+ +G A+GWL Sbjct: 133 QAGSGGTEAQDWAEMLLRMYLRWGEQKGFKVELMEVSAGDVAGIKGATIKFEGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS SRRHTSFS+++V P +DD++EI+I+ +D RIDTYRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGSRRHTSFSAVFVSPEIDDNVEIDINPADLRIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH PT VVVQCQ +RSQH+NK A LRAKLYELE+QKR + A E Sbjct: 253 HVNKTDSAVRITHEPTNVVVQCQSQRSQHQNKDFAMKQLRAKLYELEMQKRNDAAQAQED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K +IGWG QIRSYVL + +KDLRTN+E ++ VLDG LD F++A+L Sbjct: 313 NKADIGWGSQIRSYVLDSSR-IKDLRTNVETSNTQAVLDGGLDMFIEASL 361 >gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus DSM 2032] gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus DSM 2032] Length = 369 Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 175/338 (51%), Positives = 233/338 (68%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D +++ L +T P+ W N EAK + R+ L + I ++ L D +LL Sbjct: 28 LDLDGKREQVELLERQTVSPNFWDNQSEAKRVQRQLGQLQDLIGVWEKNFGDLEDAEMLL 87 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++A EE+D QE L ++ VE + E + SGE D+N+A L +HAGAGGTE+QDW Sbjct: 88 DMAREENDQDTYQEVVSGLDDLRRRVELVELECMFSGEHDANNAILTIHAGAGGTEAQDW 147 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 +LLRMY RWAE + FK + L++ G+EAG KS T+++KG AYG+L+ E G+HRLVRI Sbjct: 148 VGILLRMYLRWAESKGFKADILDLLPGDEAGTKSVTIMVKGKYAYGYLRSEVGIHRLVRI 207 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D++ RRHTSF+S+ V P +DD +EIEI++ D RIDTYRASG+GGQHVN TDSA+RIT Sbjct: 208 SPFDASGRRHTSFASVMVMPELDDDVEIEINDKDIRIDTYRASGSGGQHVNKTDSAIRIT 267 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ ERSQH NKA A ML A+LYE E ++++ + K EI WG QIR Sbjct: 268 HFPTGIVVQCQNERSQHSNKATAMKMLMARLYEREKEEQQRTQENIQGDKKEIAWGSQIR 327 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVLQPY+++KD RTN E+ + VLDG LD F+KA L Sbjct: 328 SYVLQPYRLIKDHRTNTEEGNVDAVLDGRLDPFIKAYL 365 >gi|319787302|ref|YP_004146777.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1] gi|317465814|gb|ADV27546.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1] Length = 375 Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 177/349 (50%), Positives = 245/349 (70%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G D+D +RL +N + E P++W + A+ L RER L+ + I + Sbjct: 14 LTGRVVSLRGYLDYDAKKERLEEVNRELELPNVWDDPERAQALGRERALLEKTVGGIASV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L + LLELA E D + ++ R + +E +F+ + SG+ D +A++++ Sbjct: 74 LEGLEGSTELLELAESEQDEETAEAVVADVDRFEKHIEALEFQRMFSGQMDGANAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA MLLRMY RW E R +KTE LE+ G+ AGIKSAT ++G AYGWLK Sbjct: 134 AGAGGTEAQDWAEMLLRMYLRWCESRGWKTELLEVSGGDVAGIKSATFRVEGDFAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD I+IEI+ +D + D YR+SGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDKIDIEINPADLKTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+P+G+VV CQ ERSQH N+ +A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYELEIQKRNAEKDAVEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIR+YVL + +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 361 >gi|218666919|ref|YP_002424975.1| peptide chain release factor 2, programmed frameshift [Acidithiobacillus ferrooxidans ATCC 23270] gi|226739123|sp|B7J4M2|RF2_ACIF2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|218519132|gb|ACK79718.1| peptide chain release factor 2, programmed frameshift [Acidithiobacillus ferrooxidans ATCC 23270] Length = 365 Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 174/349 (49%), Positives = 240/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D + RL + + EDP +W N +A+ L RER L+ I+ + ++ Sbjct: 14 LQVRVAGLRGYLDLEEKRGRLEEVQRELEDPTIWNNAEKAQELGRERSALEAVITPMDKL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +LELAL E D +L +L VE +F+ + SG D+ + ++++ Sbjct: 74 TASLADGGEMLELALSEQDAELLAAVDADLDTALSLVEKLEFQRMFSGAQDAANCFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA M+LRMY WAE F E +E+ +GE AGIKSA++ ++G +A+GWL+ Sbjct: 134 AGAGGTEAQDWAEMILRMYLHWAESHGFAAELVEVSEGEVAGIKSASIHVRGDHAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++VYP +DDS E++I+ +D ++DTYRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEIDDSFEVDINPADLKVDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH+P+G+VV CQ +RSQHKN+A+A MLR+KLYE+E+QKR E S Sbjct: 254 VNKTDSAIRITHVPSGIVVACQTDRSQHKNRAEAMRMLRSKLYEMEMQKRAVEKQALEDS 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E VLDG LD F++A L Sbjct: 314 KSDIGWGHQIRSYVLDQSR-IKDLRTGVEVGDTQKVLDGALDMFIEAAL 361 >gi|40063231|gb|AAR38058.1| peptide chain release factor 2 [uncultured marine bacterium 577] Length = 359 Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 171/342 (50%), Positives = 246/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +R ++ EDP +W++ A+ L RE++ LD + ++ I+ +L D+ Sbjct: 15 FGGIFDFDAKKERSDEISFLEEDPEIWKDSKRAQELGREKKILDKIVLTLETIKLQLQDS 74 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + L ++A EE+D +L+ + +++ V +F ++ S D N+ +LE+ +G+GGTE Sbjct: 75 IDLFQMAKEENDIVVLESIRADAAKLETNVANMEFCNMFSNPMDPNNCFLEIQSGSGGTE 134 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA ML RMY R+ E+R +K E LE GE AGIKSA+L I G AYG+L+ E G+HR Sbjct: 135 AQDWAAMLERMYLRYCERRDYKVEVLEESSGEVAGIKSASLKISGDYAYGYLRTESGIHR 194 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS SRRHTSF+S+++YP VDD+IEIEI+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 195 LVRKSPFDSGSRRHTSFASVFIYPEVDDTIEIEINPADLRVDTYRASGAGGQHINKTDSA 254 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH P+G+VV CQ +RSQH+N+A+A ML+++LYE+EL+K+ + E SKT+IGWG Sbjct: 255 IRITHNPSGIVVSCQNDRSQHRNRAEAMAMLKSRLYEVELRKQSDEKQAMEDSKTDIGWG 314 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDG LD+F+K +L Sbjct: 315 HQIRSYVLDQSR-IKDLRTGLEIGNTQGVLDGGLDEFIKTSL 355 >gi|169794367|ref|YP_001712160.1| peptide chain release factor 2 [Acinetobacter baumannii AYE] gi|184159830|ref|YP_001848169.1| protein chain release factor B [Acinetobacter baumannii ACICU] gi|213159055|ref|YP_002321053.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057] gi|215481924|ref|YP_002324106.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294] gi|239503845|ref|ZP_04663155.1| peptide chain release factor 2 [Acinetobacter baumannii AB900] gi|260557921|ref|ZP_05830134.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606] gi|332854818|ref|ZP_08435581.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150] gi|332868948|ref|ZP_08438507.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113] gi|332872826|ref|ZP_08440791.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059] gi|169147294|emb|CAM85155.1| peptide chain release factor 2 [Acinetobacter baumannii AYE] gi|183211424|gb|ACC58822.1| Protein chain release factor B [Acinetobacter baumannii ACICU] gi|213058215|gb|ACJ43117.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057] gi|213988530|gb|ACJ58829.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294] gi|260408712|gb|EEX02017.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606] gi|322509742|gb|ADX05196.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2] gi|323519757|gb|ADX94138.1| protein chain release factor B [Acinetobacter baumannii TCDC-AB0715] gi|332727820|gb|EGJ59224.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150] gi|332732991|gb|EGJ64193.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113] gi|332738987|gb|EGJ69849.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059] Length = 310 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 170/307 (55%), Positives = 226/307 (73%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 RFIEASL 306 >gi|33596662|ref|NP_884305.1| peptide chain release factor 2 [Bordetella parapertussis 12822] gi|81579293|sp|Q7W8T4|RF2_BORPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|33573363|emb|CAE37347.1| peptide chain release factor 2 [Bordetella parapertussis] Length = 367 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 169/338 (50%), Positives = 246/338 (72%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +RL +N + EDP +W + A+ L RE++ L++ + + E+ L D+ L+ Sbjct: 27 LDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELV 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELAL + D + L+ ++ R + ++E +F + + AD + ++++ AGAGGTE+QDW Sbjct: 87 ELALADSDDATLEAIEHDVDRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLR Y ++AE++ FK E LE +G+ AG+KSAT+ I+G A+G+L+ E GVHRLVR Sbjct: 147 ASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS+ RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SKT++GWG QIR Sbjct: 267 HAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 327 SYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363 >gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 336 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 169/332 (50%), Positives = 237/332 (71%), Gaps = 1/332 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L+++ + LWQ+ +A+ +++ER + N + +++ D + L++ A++E+D Sbjct: 2 RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E + L +++ ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY Sbjct: 62 EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 RWAE FK E +E +GE GIKSA + I G AYGW K E G+HRLVRISP+D+N Sbjct: 122 IRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ RSQH+NK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ PY Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QMVKDLRT E + + V DG++D F+ + L Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLT 333 >gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus ATCC 23263] Length = 369 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 238/349 (68%), Gaps = 3/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +L LG D RLS L T++EDP W + A+ +++E+ L S E+ Sbjct: 14 MDAELTALGKSMDLPAIDARLSALMTQSEDPAFWNDQKSAQKVLKEQTILKRKRSRYDEV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L D ++ ELA E + L++ Q + E + E LLSGE DSN+A + +H Sbjct: 74 KEELDDVSVMYELAEEGEGMDELEQMLGAFQE---KFEDFKLEMLLSGEYDSNNAIISLH 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+MLLRMYTRWAE R +K + L+ G+ AGIKSATLLI+G NAYG+LK Sbjct: 131 PGAGGTESHDWASMLLRMYTRWAEARGYKIKQLDYQPGDIAGIKSATLLIEGINAYGYLK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+ D R+DTYR+SGAGGQH Sbjct: 191 TERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINPDDIRVDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SA+RITH+PTGVVVQCQ ERSQH+N+ A NML++KL E+ Q+++E Sbjct: 251 VNKTSSAIRITHLPTGVVVQCQNERSQHQNREVAMNMLKSKLVEIMAQEQKEKLEDVVGD 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++I WG QIRSYV PY MVKD RT +E + V+DGDLD FM A L Sbjct: 311 YSQIAWGSQIRSYVFHPYTMVKDHRTGVEVGNIQTVMDGDLDRFMNAEL 359 >gi|296136248|ref|YP_003643490.1| hypothetical protein Tint_1790 [Thiomonas intermedia K12] gi|295796370|gb|ADG31160.1| conserved hypothetical protein [Thiomonas intermedia K12] Length = 367 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 171/349 (48%), Positives = 247/349 (70%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L G D+D RL + EDP +W + A+ L RER+ L+ + ++ + Sbjct: 16 LQQRVQALRGYLDFDAKASRLMEVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D+ L E++ EE D + + ++++ EVE +F + S D ++ ++++ Sbjct: 76 TTALADHSELFEMSREEGDDATCEAIEADVEKSAAEVEALEFRRMFSNPLDPSNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FKTE +E +G+ AGI+SAT+ ++G AYG L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP VDDSIEI+I+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDDSIEIDINPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+TH+PTG+VVQCQ +RSQHKN+A+AW MLR++LYE E++KR ES+ Sbjct: 256 INKTDSAVRLTHMPTGIVVQCQNDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLEST 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD+F+ A+L Sbjct: 316 KSDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDEFITASL 363 >gi|194365600|ref|YP_002028210.1| peptide chain release factor 2 [Stenotrophomonas maltophilia R551-3] gi|238693429|sp|B4SHV0|RF2_STRM5 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|194348404|gb|ACF51527.1| conserved hypothetical protein [Stenotrophomonas maltophilia R551-3] Length = 374 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 179/349 (51%), Positives = 241/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G D+D +RL + + E P +W N A+ L RER L+ + I + Sbjct: 14 LTDRVLSLRGYLDYDAKKERLEEVTRELESPDVWNNAEYAQNLGRERSSLEKTVGGIASV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D L D LLELA E D +L + + VE +F+ + SGE D+ A++++ Sbjct: 74 LDGLADATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA +LLRMY RW E R +KTE +E+ G+ AGIKSATL ++G AYGWLK Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +VV CQ RSQH+N+ A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDAVEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIR+YVL + +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 361 >gi|212710038|ref|ZP_03318166.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM 30120] gi|212687245|gb|EEB46773.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM 30120] Length = 329 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 177/326 (54%), Positives = 229/326 (70%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N + E P +W A+ L +ER L+ + I ++ + D LLELA+E DD Sbjct: 1 MNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLTQGIEDVEGLLELAVEADDEETF 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L ++ ++E +F + SGE DS D Y+++ AG+GGTE+QDWA+ML+RMY RWA Sbjct: 61 NEAGAELDALQGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMYLRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTS Sbjct: 121 ESKGFKTEIIEESDGDVAGLKSATIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ Sbjct: 181 FSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQN 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQHKNK QA L+AKLYELE+QK+ E +K++IGWG QIRSYVL + +KD Sbjct: 241 DRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDDAR-IKD 299 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT +E + VLDGDLD F++A+L Sbjct: 300 LRTGVETRNTQAVLDGDLDKFIEASL 325 >gi|33592241|ref|NP_879885.1| peptide chain release factor 2 [Bordetella pertussis Tohama I] gi|33601278|ref|NP_888838.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50] gi|81578745|sp|Q7VZ35|RF2_BORPE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|81580061|sp|Q7WK44|RF2_BORBR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|33571886|emb|CAE41402.1| peptide chain release factor 2 [Bordetella pertussis Tohama I] gi|33575713|emb|CAE32791.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50] Length = 367 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 169/338 (50%), Positives = 245/338 (72%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +RL +N + EDP +W + A+ L RE++ L++ + + E+ L D+ L+ Sbjct: 27 LDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELV 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELAL + D + L+ + R + ++E +F + + AD + ++++ AGAGGTE+QDW Sbjct: 87 ELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLR Y ++AE++ FK E LE +G+ AG+KSAT+ I+G A+G+L+ E GVHRLVR Sbjct: 147 ASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS+ RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SKT++GWG QIR Sbjct: 267 HAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 327 SYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363 >gi|227356361|ref|ZP_03840749.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906] gi|227163471|gb|EEI48392.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906] Length = 320 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 176/317 (55%), Positives = 229/317 (72%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W +A+ L +ER L+ + I +++ L D LL+LA+E DD E L+ Sbjct: 1 MWNEPEKAQALGKERSSLEAIVETIDQLEQGLEDVSGLLDLAVEADDEETFNEAVAELEG 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + ++E +F + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE Sbjct: 61 LNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESRGFKTEI 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP Sbjct: 121 IEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK Sbjct: 181 VDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHVPTGLVTQCQNDRSQHKNKD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA ++AKLYELE+QK+ + E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 241 QAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 300 TQAVLDGDLDKFIEASL 316 >gi|292487146|ref|YP_003530016.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430] gi|291552563|emb|CBA19608.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430] gi|312171251|emb|CBX79510.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC BAA-2158] Length = 332 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 176/326 (53%), Positives = 230/326 (70%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N + E P +W A+ L +ER L+ + + ++ L D LLELA+E +D Sbjct: 4 VNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDEDTF 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + ++ +F + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWA Sbjct: 64 NEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + FKTE +E DGE AG KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTS Sbjct: 124 EAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ Sbjct: 184 FSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQN 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQHKNK QA+ LRAKLYE E+QK+ E +K++IGWG QIRSYVL + +KD Sbjct: 244 DRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDDSR-IKD 302 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT++E + VLDGDLD F++A+L Sbjct: 303 LRTSVETRNTQAVLDGDLDRFIEASL 328 >gi|74316939|ref|YP_314679.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC 25259] gi|74056434|gb|AAZ96874.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC 25259] Length = 349 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 173/341 (50%), Positives = 243/341 (71%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG FD+ RL + +E P W + A+ L RER+ L++ + + + L D Sbjct: 6 GGFFDYPVKKDRLEEVVRLSEAPDFWNDAARAQELGRERKSLEDVVLVLDRVTSGLKDAG 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+A EE+D L ++ ++ +V +F + S AD ++ +L++ AGAGGTE+ Sbjct: 66 ELFEMAREENDDDTLAAVQADIDGLEKDVATLEFRRMFSNPADPSNCFLDIQAGAGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++AE++ FK E LE +G+ AGIKSA++ I+G AYG+L+ E GVHRL Sbjct: 126 CDWASMLLRQYLKYAERKGFKAELLEESEGDVAGIKSASIKIEGDYAYGYLRTETGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP VDDSIE+EI+ +D R+DTYRASGAGGQH+N TDSAV Sbjct: 186 VRKSPFDSSGGRHTSFASVFVYPEVDDSIEVEINPADLRVDTYRASGAGGQHINKTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIP+G+VVQCQ +RSQHKN+A+A +ML++KLYE EL+KR+ + E+ K ++GWG Sbjct: 246 RITHIPSGIVVQCQNDRSQHKNRAEAMSMLKSKLYEAELRKRQAEQDKLEAGKADVGWGH 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 306 QIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 345 >gi|190571741|ref|YP_001976099.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190358013|emb|CAQ55482.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 335 Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 170/334 (50%), Positives = 237/334 (70%), Gaps = 1/334 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L+++ + +LWQ+ +A+ +++ER + + I +++ D++ L+ A++E+D Sbjct: 2 RLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E L +++ ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW ML+RMY Sbjct: 62 EEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 TRWAE FK E +E DG+ GIKS T+ I G AYGW K E GVHRLVRISP+D+N Sbjct: 122 TRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFDANG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV Sbjct: 182 KRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 QCQ RSQHKNK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ PY Sbjct: 242 AQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QMVKDLRT E + + V DG++D F+ + L +K Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 335 >gi|213019226|ref|ZP_03335033.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995335|gb|EEB55976.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 337 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 170/334 (50%), Positives = 237/334 (70%), Gaps = 1/334 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L+++ + +LWQ+ +A+ +++ER + + I +++ D++ L+ A++E+D Sbjct: 4 RLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAIDEND 63 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E L +++ ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW ML+RMY Sbjct: 64 EEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLMRMY 123 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 TRWAE FK E +E DG+ GIKS T+ I G AYGW K E GVHRLVRISP+D+N Sbjct: 124 TRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFDANG 183 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV Sbjct: 184 KRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 243 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 QCQ RSQHKNK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ PY Sbjct: 244 AQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVMHPY 303 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QMVKDLRT E + + V DG++D F+ + L +K Sbjct: 304 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 337 >gi|226941341|ref|YP_002796415.1| PrfB [Laribacter hongkongensis HLHK9] gi|226716268|gb|ACO75406.1| PrfB [Laribacter hongkongensis HLHK9] Length = 368 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 172/338 (50%), Positives = 240/338 (71%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D RL ++ EDP +W++ A+ L RE++ L++ + I I L D+ L Sbjct: 28 LDYDGKKDRLEEVSRLVEDPTIWEDPKRAQELGREKKALEDVVLVIDSILSTLADSRELF 87 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++ E+D + D+L ++ +E +F + S D N ++++ +GAGGTE+QDW Sbjct: 88 DMGRAEEDDDTVLAVRDDLAGVETRLEMLEFRRMFSNPMDPNSCFVDIQSGAGGTEAQDW 147 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+ML RMY R+ E++ FK E +E +GE AGIKSATL ++G AYG+L+ E GVHRLVR Sbjct: 148 ASMLERMYLRYCERKNFKVEVIEESEGEVAGIKSATLKVEGEYAYGFLRTETGVHRLVRN 207 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RR TSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 208 SPFDSNNRRQTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQHINKTDSAVRIT 267 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+PT +VVQCQ +RSQHKN+A+A +ML+A+L+ELEL+KR E E +KT++GWG QIR Sbjct: 268 HLPTNIVVQCQNDRSQHKNRAEAMSMLKARLFELELRKRNEEKQALEDTKTDVGWGHQIR 327 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV + VKDLRT +E + V+DGDLD F++A+L Sbjct: 328 SYVFDQSR-VKDLRTLVEVGNVKGVMDGDLDGFIEASL 364 >gi|163857078|ref|YP_001631376.1| peptide chain release factor 2 [Bordetella petrii DSM 12804] gi|163260806|emb|CAP43108.1| peptide chain release factor 2 [Bordetella petrii] Length = 337 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 168/332 (50%), Positives = 242/332 (72%), Gaps = 1/332 (0%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 +RL +N + EDP +W + A+ L RE++ L++ ++ + ++ + D L L ELA + Sbjct: 3 AERLQVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVTTLTALRSGVADALELFELASAD 62 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 DD + L+ + + ++E +F + S AD + +L++ AGAGGTE+QDWA+MLLR Sbjct: 63 DDDATLESIESDADGFQQQLEGLEFRRMFSNPADPLNCFLDIQAGAGGTEAQDWASMLLR 122 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 Y ++AE++ FK E LE +GE AGIKSAT+ ++G A+G+L+ E GVHRLVR SP+DS+ Sbjct: 123 QYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGDYAFGYLRTETGVHRLVRKSPFDSS 182 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 RHTSF+S++VYP VDDS EI+++ +D R+DTYRASGAGGQH+N TDSAVR+TH+PTG+ Sbjct: 183 GGRHTSFASVFVYPEVDDSFEIDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHLPTGI 242 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SKT++GWG QIRSYVL Sbjct: 243 VVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGWGHQIRSYVLDQ 302 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 303 SR-IKDLRTNVEISNTQKVLDGDLDTFIQASL 333 >gi|88812905|ref|ZP_01128149.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231] gi|88789827|gb|EAR20950.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231] Length = 325 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 175/321 (54%), Positives = 229/321 (71%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P +W + A L RER L +S ++ + L D LLELA E+D + L E Sbjct: 2 EQPDVWNDPERAHELNRERVRLQTLVSSLERLTRGLADTAELLELARTENDEATLAELDA 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 ++ + E+E +F + SGE D +A+L++ AG+GGTE+QDWANMLLRMY RW E+++F Sbjct: 62 DVTGYQSEIEALEFRRMFSGEMDERNAFLDIQAGSGGTEAQDWANMLLRMYLRWVEQKRF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E +E +GE AGIKSATL I+G A+GWL+ E GVHRLVR SP+DS +RRHTSF++++ Sbjct: 122 TAEIIEFSEGEVAGIKSATLRIEGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +DD++E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQH Sbjct: 182 VSPELDDAVEVEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTGIVTQCQNDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNKA A LRAKLYELE+ KR E A+ E SK +IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNKATAMKQLRAKLYELEMHKRREQADQVEESKADIGWGSQIRSYVLDQSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E VL+G LD F++A+L Sbjct: 301 EIGHTQAVLNGALDPFIEASL 321 >gi|20663625|pdb|1GQE|A Chain A, Polypeptide Chain Release Factor 2 (Rf2) From Escherichia Coli Length = 365 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 182/349 (52%), Positives = 233/349 (66%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + + Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQX 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRXFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ L R Y RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA +AKLYE+E QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAXKQXKAKLYEVEXQKKNAEKQAXEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 361 >gi|293449213|ref|ZP_06663634.1| peptide chain release factor 2 [Escherichia coli B088] gi|332280425|ref|ZP_08392838.1| peptide chain release factor RF-2 [Shigella sp. D9] gi|291322303|gb|EFE61732.1| peptide chain release factor 2 [Escherichia coli B088] gi|332102777|gb|EGJ06123.1| peptide chain release factor RF-2 [Shigella sp. D9] Length = 332 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 178/326 (54%), Positives = 227/326 (69%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N + E P +W A+ L +ER L+ + + +++ L D LLELA+E DD Sbjct: 4 VNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETF 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L ++ ++ +F + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWA Sbjct: 64 NEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLVR SP+DS RRHTS Sbjct: 124 ESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ Sbjct: 184 FSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQN 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG QIRSYVL + +KD Sbjct: 244 DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKD 302 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT +E + VLDG LD F++A+L Sbjct: 303 LRTGVETRNTQAVLDGSLDQFIEASL 328 >gi|288941013|ref|YP_003443253.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180] gi|288896385|gb|ADC62221.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180] Length = 349 Score = 355 bits (911), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 184/341 (53%), Positives = 241/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ RL+ + + EDP +W + A+ L RER L+ + I E+ L D Sbjct: 6 GGIFDYAERKDRLTEVLRELEDPTIWNDPGRAQALGRERATLEAVVLTIDELTGALADAD 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL LA EE D + L+ +L+ + V +F + SGE D+ +A++++ AG+GGTE+ Sbjct: 66 DLLALAAEESDEATLESLVADLKSHEARVSELEFRRMFSGEMDACNAFVDIQAGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RW E+R FKTE +E+ GE AGIKSAT+ +G A+GWL+ E GVHRL Sbjct: 126 QDWAEMLLRMYLRWGERRGFKTELMEVSAGEVAGIKSATVKFEGDYAFGWLRTEIGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSFSS++V P VDDS+EIEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 186 VRKSPFDSGNRRHTSFSSVFVSPEVDDSVEIEINPADLRIDVYRASGAGGQHVNRTESAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQHKNK QA L++KLYELE+QKR E +K++IGWG Sbjct: 246 RITHNPTGIVVQCQNDRSQHKNKDQAMKQLKSKLYELEMQKRRASQQALEETKSDIGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDG+LD F++A+L Sbjct: 306 QIRSYVLDQSR-IKDLRTGVEIANTQGVLDGNLDPFIQASL 345 >gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008] gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella parvula DSM 2008] Length = 368 Score = 355 bits (911), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 171/349 (48%), Positives = 243/349 (69%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ +G F+ R+ L+ + DP W N +A+ + +E L NA+ K++ Sbjct: 12 LEERIYGMGIHFNIAQKEDRIFTLDVQMSDPTFWDNPDKAREISQEATQLKNAVESYKQL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D ++LE+A++EDD S+ E + +++I+ +E ++ LLSGE D+N+A L H Sbjct: 72 VSDIEDANVMLEMAIDEDDLSMESEIKEYVKQIEETLEKQEVLLLLSGEYDANNAILTFH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW +ML+RMY RWAEK F E ++ G+EAGIKSAT L+KG NA+G+LK Sbjct: 132 AGAGGTEAQDWCSMLIRMYLRWAEKSGFSIELMDEQPGDEAGIKSATFLVKGENAFGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D+ +RRHTSF+++ V P +DD++EI I D ++DTYRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDAAARRHTSFAAVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+TH PTG+VVQCQ +RSQ +N+ QA +LRAKL+ELEL+K+ E+ + Sbjct: 252 INKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGGT 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIRSYV PY +VKD RT++E + V+DG+LD F++ L Sbjct: 312 YQAIEWGSQIRSYVFHPYNLVKDHRTSVETGNVQAVMDGNLDPFIEGFL 360 >gi|237745578|ref|ZP_04576058.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS] gi|229376929|gb|EEO27020.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS] Length = 349 Score = 355 bits (910), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 173/341 (50%), Positives = 240/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ +L +N + EDP +W + +A+ L RE++ L+N + + I+ L D Sbjct: 6 GGIFDFAAKSDKLEQVNAELEDPAVWNDPKKAQELGREKKSLENVVLSLSHIKSALTDAG 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+A EE D L+ ++ ++ +E +F + S D + ++++ AGAGGTE+ Sbjct: 66 ELFEMAKEEQDDETLKAVEADVSELQDRIEKLEFRRMFSNPMDPCNCFVDIQAGAGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+M+LR Y R+ E++ F LE DGE AGIK+AT+ ++G AYG+L+ E GVHRL Sbjct: 126 QDWASMILRQYLRYCERKGFNATILEQSDGEIAGIKTATIKVEGDYAYGYLRTETGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS + RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSAV Sbjct: 186 VRKSPFDSANGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VVQCQ +RSQH+N+A AW ML+++LYELEL+KR E SKT++GWG Sbjct: 246 RLTHIPTGIVVQCQNDRSQHRNRADAWEMLKSRLYELELRKRMAEQQKLEDSKTDVGWGH 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT+ E + VLDGDLDDF+ +L Sbjct: 306 QIRSYVLDSSR-IKDLRTSHETGNTKAVLDGDLDDFIIESL 345 >gi|90409172|ref|ZP_01217287.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3] gi|90309717|gb|EAS37887.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3] Length = 349 Score = 355 bits (910), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 174/344 (50%), Positives = 243/344 (70%), Gaps = 1/344 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 N GG+FD+D V+RL + + E P +W + A+ L +ER L+ + IK ++ Sbjct: 3 NYSGGIFDYDVKVERLEEVTRELESPEVWNDPERAQALGKERSALELIVETIKALEIGCD 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + L+L+ELA++E D E ++ ++ ++E +F + SG+ DS YL++ +G+GG Sbjct: 63 EILMLVELAVDEQDQDTFDEAANETLELEKKLEVLEFRRMFSGKNDSCSCYLDIQSGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWANMLLRMY RW E +KTE +E+ G+ AGIK AT+ G AYGWL+ E GV Sbjct: 123 TEAQDWANMLLRMYLRWGEANGYKTELMEVSAGDVAGIKGATIRFSGEYAYGWLRTETGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ +RHTSF+S +VYP V+D+I+I I+ ++ RID YRASGAGGQHVNTT+ Sbjct: 183 HRLVRKSPFDSSGKRHTSFASAFVYPEVEDNIDIVINPAELRIDVYRASGAGGQHVNTTE 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT +VVQCQ +RSQHKNK QA L+AKLYE E+Q + I E +K++IG Sbjct: 243 SAVRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLYEHEVQIQNVEKQISEDNKSDIG 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYVL + +KDLRT +E +P VLDG+L++F++A+L Sbjct: 303 WGSQIRSYVLDDAR-IKDLRTGVESRNPQRVLDGELNEFIEASL 345 >gi|284008432|emb|CBA74885.1| peptide chain release factor 2 [Arsenophonus nasoniae] Length = 332 Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 176/326 (53%), Positives = 230/326 (70%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N + E P +W A+ L +ER L+ + I + L D LL+LA+E DD Sbjct: 4 VNAELEQPDVWNEPERAQALGKERSSLEAIVETIDALIQGLDDVSGLLDLAIEADDEDTF 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L +++ ++ +F + SG+ DS + YL++ AG+GGTE+QDWA+ML+RMY RWA Sbjct: 64 HEAVAELAQLEGKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTS Sbjct: 124 ESKGFKTEIIEASDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ Sbjct: 184 FSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTGIVTQCQN 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQHKNK QA+ L+AKLYELE+QK+ E +K++IGWG QIRSYVL + +KD Sbjct: 244 DRSQHKNKDQAFKQLKAKLYELEMQKKNADKQALEENKSDIGWGSQIRSYVLDDSR-IKD 302 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT +E + VLDGDLD F++A+L Sbjct: 303 LRTGVENRNTQAVLDGDLDKFIEASL 328 >gi|169634751|ref|YP_001708487.1| peptide chain release factor 2 [Acinetobacter baumannii SDF] gi|169153543|emb|CAP02711.1| peptide chain release factor 2 [Acinetobacter baumannii] Length = 310 Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 169/307 (55%), Positives = 225/307 (73%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E K++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDLKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 RFIEASL 306 >gi|77359475|ref|YP_339050.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis TAC125] gi|123589557|sp|Q3ILD8|RF2_PSEHT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|76874386|emb|CAI85607.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas haloplanktis TAC125] Length = 365 Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 180/342 (52%), Positives = 232/342 (67%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L G D+ +RL +N + ED +W A+ L RE+ L+ + I + D Sbjct: 21 LRGYLDYALKQERLEEVNAELEDSAVWNEPERAQALGREKSALEAVVETIDTLVTGTDDV 80 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E +D E L + ++E +F + SG DSNDAYL++ +G+GGTE Sbjct: 81 EGLLELAVEAEDQETFDEAQSELADLNEQLEALEFRRMFSGPHDSNDAYLDLQSGSGGTE 140 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW N+LLRMY RW E + FK E +E G+ AGIK AT+ G AYGWL+ E GVHR Sbjct: 141 AQDWCNILLRMYLRWGEAKGFKVELVEATGGDVAGIKGATVRFVGEYAYGWLRTETGVHR 200 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF+S +VYP VDD+IEI+++ SD RID YRASGAGGQHVNTT+SA Sbjct: 201 LVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDMNPSDLRIDVYRASGAGGQHVNTTESA 260 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ ERSQHKNKAQA L+AKL+ELELQ++ E SK++IGWG Sbjct: 261 VRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQEDSKSDIGWG 320 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDG+LD F++A+L Sbjct: 321 SQIRSYVLDDAR-IKDLRTGVESRNTQSVLDGNLDKFIEASL 361 >gi|325123846|gb|ADY83369.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2] Length = 310 Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 168/307 (54%), Positives = 226/307 (73%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRA+L Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 RFIEASL 306 >gi|77164311|ref|YP_342836.1| peptide chain release factor 2 [Nitrosococcus oceani ATCC 19707] gi|254433270|ref|ZP_05046778.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27] gi|76882625|gb|ABA57306.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosococcus oceani ATCC 19707] gi|207089603|gb|EDZ66874.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27] Length = 331 Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 173/319 (54%), Positives = 226/319 (70%), Gaps = 1/319 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P +W A+ L +ER L + ++ + E+ + L ELA+EE D QE L Sbjct: 10 PSVWDEPERAQQLGQERAQLQSVVAPLAELGGEIIQVRELFELAMEEGDEDTAQEIIAEL 69 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++ + +F+ + +GE D N+AYL++ AG+GGTE+QDWANMLLRMY RW EK FKT Sbjct: 70 DVVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWGEKHSFKT 129 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E E+ +GE AGIKSA + +G A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++VY Sbjct: 130 ELTEVSEGEVAGIKSAAIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVY 189 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+P+ +VVQCQ ERSQH+N Sbjct: 190 PEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLPSSLVVQCQSERSQHQN 249 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 KA A LRAKLYELE++ R+ E +K +IGWG QIR+YVL + +KDLRT IE Sbjct: 250 KAHAMAQLRAKLYELEMRNRQAEKQAAEEAKADIGWGSQIRNYVLDQSR-IKDLRTGIEV 308 Query: 333 TSPSDVLDGDLDDFMKATL 351 + VLDGDLD F++A+L Sbjct: 309 GNTQGVLDGDLDSFIEASL 327 >gi|171463253|ref|YP_001797366.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192791|gb|ACB43752.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 349 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 169/342 (49%), Positives = 245/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL+ +N+ EDP +W + +A+ L +E++ LD ++ + ++ + Sbjct: 5 FGGIFDFDVKSRRLTEINSILEDPTIWDDQKKAQALGKEKKLLDGIVATLTDLNTNITSA 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L L ++A EE D + +++ + +F + E DS + ++++ AGAGGTE Sbjct: 65 LELFDMAKEESDFETIAAIEQDVEGYSKIIGDLEFRRMFHNEMDSCNCFIDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+ML R Y ++ E++ +KTE LE DG+ AGIKSAT+ + G AYG L+ E GVHR Sbjct: 125 ACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS++ RHTSF+SI+VYP +DDSIEIE++ +D R DTYRASGAGGQH+N TDSA Sbjct: 185 LVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIEVNPADIRTDTYRASGAGGQHINKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+THIPTG+VVQCQ +RSQH+N+A+A ML+++LYE E+QKR + E+SKT++GWG Sbjct: 245 VRLTHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 305 HQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 345 >gi|89094633|ref|ZP_01167570.1| peptide chain release factor 2, programmed frameshift [Oceanospirillum sp. MED92] gi|89081103|gb|EAR60338.1| peptide chain release factor 2, programmed frameshift [Oceanospirillum sp. MED92] Length = 364 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 173/343 (50%), Positives = 239/343 (69%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 L G D++ +RL ++ + EDP +W + A+ L +ER L+ + I ++ + D Sbjct: 19 ALRGFLDYETKQERLEEVSRELEDPAVWDDPENAQKLGKERSTLEAVVGTIDDLTAGVAD 78 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LL++A+EEDD + E ++ + ++ +F + +GEAD N+A+L++ AG+GGT Sbjct: 79 TRDLLDMAVEEDDEDTVAEVESDVTAMLDRLQQLEFRRMFAGEADPNNAFLDIQAGSGGT 138 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA M+LRMY RW E + FKTE LE G+ AGIKSAT+ +G A+GWL+ E GVH Sbjct: 139 EAQDWAEMMLRMYLRWGEDKGFKTELLECSAGDVAGIKSATISFQGEYAFGWLRTETGVH 198 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSFSS++V P +DD+I+IEI+ +D R+D YRASGAGGQHVN T+S Sbjct: 199 RLVRKSPFDSGGRRHTSFSSVFVSPEIDDNIDIEINPADLRVDVYRASGAGGQHVNRTES 258 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH P+G+VVQ Q +RSQH+NK LRAKLYE+E+ KR E A E +K +IGW Sbjct: 259 AVRITHEPSGIVVQSQAQRSQHQNKDTCMKQLRAKLYEVEMLKRTEAAQEQEDNKADIGW 318 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL Q +KDLRT ++ ++ VLDGDLD F++A+L Sbjct: 319 GSQIRSYVLDD-QRIKDLRTGVQSSNCDKVLDGDLDMFIEASL 360 >gi|260550208|ref|ZP_05824421.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624] gi|260406736|gb|EEX00216.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624] Length = 310 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 169/307 (55%), Positives = 225/307 (73%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L + L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLVDVQSELGTAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+THIP+G+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPSGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 RFIEASL 306 >gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32] gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32] Length = 370 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 169/349 (48%), Positives = 243/349 (69%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++N L G D D+ + + L ++ P W + A+ +++ER ++ ++ + Sbjct: 12 MAERINNLRGSLDIDSLREDIQELESRIAAPGFWDDNEAAQKVLKERTVMEKTLASWDRL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D +L+EL E +D + L E D +++ + +F+ +LSG D++ + ++ Sbjct: 72 NRQVEDIRVLIELGSEAEDEATLAEVHDLNDQLEKGLVDAEFQKMLSGPHDASSCFFSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA MLLRMY R+ E++ +KTE + G+EAG+K T + G AYG+LK Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQSGDEAGVKGVTFSVSGEYAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D I+++I E+D R+DT+R+SGAGGQH Sbjct: 192 AEVGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIDVKIVETDLRVDTFRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSA+RITHIPTG+VV CQ ERSQH N+A A +LRAKLYE ELQ+RE A Sbjct: 252 VNTTDSAIRITHIPTGIVVACQTERSQHMNRATAMRVLRAKLYERELQERESQAAEIAGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG+L+ F+ A L Sbjct: 312 KKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGELEQFIIAFL 360 >gi|167767702|ref|ZP_02439755.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1] gi|167710441|gb|EDS21020.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1] gi|291558928|emb|CBL37728.1| bacterial peptide chain release factor 2 (bRF-2) [butyrate-producing bacterium SSC/2] Length = 373 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 178/347 (51%), Positives = 239/347 (68%), Gaps = 2/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L G + +R+ L E+P W NV E++ +M+E + L + +++ + Sbjct: 18 LEDLSGSLALEAKKERIDQLELNMEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L+++A E++D +++E + + + E + +LL+GE D +DA L +HAGAG Sbjct: 78 EDIETLIDMAEEDEDADLIEEATALMDEFEKTYEELRISTLLTGEYDKDDAILTLHAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA ML RM+TRWA K+ + TE L+ DG+EAGIKS T+ I G NAYG+L+ E+G Sbjct: 138 GTESCDWAGMLYRMFTRWAGKKGYGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+++ +R TSF+S V P + D IE+EI++ D RIDTYRASGAGGQH+N T Sbjct: 198 VHRLVRISPFNAAGKRQTSFASCDVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHINKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTE 305 DSA+RITH+PTG+VVQCQ ERSQHKNK QA ML+ KLY L+ Q+ E++++I + Sbjct: 258 DSAIRITHLPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKQQQHLEKLSDI-RGDVGD 316 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVLQPY MVKD RTN E +PS VLDGDLD FM A LA Sbjct: 317 NGWGNQIRSYVLQPYTMVKDHRTNFESGNPSAVLDGDLDGFMNAYLA 363 >gi|262280476|ref|ZP_06058260.1| peptide chain release factor 2 [Acinetobacter calcoaceticus RUH2202] gi|262258254|gb|EEY76988.1| peptide chain release factor 2 [Acinetobacter calcoaceticus RUH2202] Length = 310 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 168/307 (54%), Positives = 225/307 (73%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 RFIEASL 306 >gi|322435983|ref|YP_004218195.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9] gi|321163710|gb|ADW69415.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9] Length = 375 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 181/336 (53%), Positives = 229/336 (68%), Gaps = 8/336 (2%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L+ + K DP +W + ++ LMR+R+ L+ ++ E+ R D ELA E +D Sbjct: 32 LAIVEEKIADPTVWADAARSQPLMRDRKRLETLLADDAELARRSDDIEAYFELAKEGEDT 91 Query: 83 SILQETSDNLQRIKLEVEYK-QFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 D ++ I VEY Q ES +LSGE D +A + VH GAGGTESQDWA ML+R Sbjct: 92 E-----PDLVREIPALVEYADQLESKTMLSGETDLLNAIVTVHPGAGGTESQDWAEMLMR 146 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY RW E+++FK E EI DG+EAGIKSAT I G A+G L GE GVHRLVRISP+DS Sbjct: 147 MYIRWGERQRFKVEINEIQDGDEAGIKSATFTISGEFAFGLLSGETGVHRLVRISPFDSA 206 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 RRHTSF+S++V P +DD+I I+I D RIDTYR+ G GGQHVNTTDSAVRITH+PTG+ Sbjct: 207 KRRHTSFASVFVSPEIDDTIVIDIKVEDLRIDTYRSGGKGGQHVNTTDSAVRITHLPTGL 266 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 V CQ ERSQHKNK +A M+R+KLYE EL K++ E SK EIG+G QIRSYVLQP Sbjct: 267 VTGCQNERSQHKNKERAMKMMRSKLYEYELDKKKAATRKIEDSKLEIGFGSQIRSYVLQP 326 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 Y+M KDLRT +E VLDGDL+ F++ L +++ Sbjct: 327 YRMAKDLRTRVEVGDVDKVLDGDLEPFIRGFLRMRR 362 >gi|320106646|ref|YP_004182236.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4] gi|319925167|gb|ADV82242.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4] Length = 375 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 177/333 (53%), Positives = 229/333 (68%), Gaps = 2/333 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L+ + ++ DP +W + ++ LMRER+ L+ +S +++ R D EL E ++ Sbjct: 32 LARIEEQSSDPAIWADPARSQPLMRERKRLEGLLSDDADLERRSGDIDAYFELGREGENV 91 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 E + + I+ +E + ++LS E D +A + VH GAGGTESQDWA ML+RMY Sbjct: 92 E--PELAREIASIEQAIEKLESRTMLSEETDPLNAIVTVHPGAGGTESQDWAEMLMRMYL 149 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RW E++ FKTE EI DG+EAGIKSAT I G AYG L GE GVHRLVRISP+DS RR Sbjct: 150 RWGERQGFKTEINEIQDGDEAGIKSATFTITGDFAYGLLSGETGVHRLVRISPFDSAKRR 209 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSFSS++V P +DDSI I+I D RIDTYR+ G GGQHVNTTDSAVRITH+PTG+V Sbjct: 210 HTSFSSVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHVNTTDSAVRITHLPTGIVAG 269 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQHKNK +A MLR++LYE EL K++ I+ E SK EI +G QIRSYVLQPY+M Sbjct: 270 CQNERSQHKNKDKAMKMLRSRLYEFELDKKKAISRKLEDSKLEINFGSQIRSYVLQPYRM 329 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 KDLRT +E VLDGDL+ F++ L +++ Sbjct: 330 AKDLRTRVEVGDVDRVLDGDLEPFIRGFLRMRR 362 >gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2] gi|166225114|sp|A6Q582|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2] Length = 368 Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 174/351 (49%), Positives = 234/351 (66%), Gaps = 4/351 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL +++ + + D +RL + P W + +A + +E+ L + +E Sbjct: 12 KLEQKIENIKNIIKPDLITKRLKEIEQLENSPDFWNDAKKAGEIQKEKNRLSRILEKFEE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L E+A EE+D L + ++ +V + E++LSGE D +A + + Sbjct: 72 ARSSVEDAKDLFEMATEEEDTETLNMLFEEAPTLEEKVNKIEIETMLSGENDDKNAIVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA++L RMY RWAE+ FK E L+ +GEEAGIK + +IKG NAYG+L Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERHGFKVEVLDYQEGEEAGIKDVSFIIKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DSN+RRHTSF+S+ V P VDD I I I + D R+DTYRASGAGGQ Sbjct: 192 KAENGIHRLVRISPFDSNARRHTSFASVMVSPEVDDDINIVIEDKDIRVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300 HVN TDSA+RITHIPTG+VVQCQ +RSQHKN+A A ML+++LYELEL+ KR E I Sbjct: 252 HVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELEKKRAEQEGI-- 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L Sbjct: 310 -EKSDIGWGHQIRSYVLAPYQQVKDTRSNKAYSNVEAILDGDIDKIIEDVL 359 >gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str. F0412] gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str. F0412] Length = 330 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 169/320 (52%), Positives = 229/320 (71%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W N +A+ + +E L NA+ K++ + D ++LE+A+EEDD S+ E + Sbjct: 3 DPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDSSMESEIKEY 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ I+ VE ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK F Sbjct: 63 VKAIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSGFS 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAG KS+T LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ V Sbjct: 123 IELMDEQPGDEAGTKSSTFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ + Sbjct: 183 MPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +LRAKL+ELEL+K+ EI + I WG QIRSYV PY +VKD RTN+E Sbjct: 243 NREQALRLLRAKLFELELEKQAEIKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTNVE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG+LD F++ L Sbjct: 303 TGNVQAVMDGNLDQFIEGFL 322 >gi|269469023|gb|EEZ80587.1| protein chain release factor B [uncultured SUP05 cluster bacterium] Length = 364 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 176/349 (50%), Positives = 239/349 (68%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ + L D + RL + + E+P +W N EA+ L +E+ L+ Sbjct: 13 LTQRSSALSAHLDLEEKQGRLEEVLLEMENPDIWSNPDEAQALGQEKSKLELICQTFARA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLE+A E+D + +L ++L +E +FE + SGE D+N AYL++ Sbjct: 73 NSILEDAKELLEMAQSENDKDTVNSVIGDLNTVELSIEKLEFERMFSGELDANSAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWA M+LRMY RW EK KFK + +E+ GE AGIKSAT+ G A+GWL+ Sbjct: 133 SGSGGTEAQDWAEMILRMYLRWGEKHKFKVKLMEVSAGEVAGIKSATIHFNGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+++N +RHTSFSS++V P +DD+IEI I+ SD RIDTYRASGAGGQH Sbjct: 193 SEIGIHRLVRKSPFNANGKRHTSFSSVFVSPEIDDNIEININPSDLRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT VVQCQ RSQH NK QA L++KLYELE+Q+R + E + Sbjct: 253 VNKTESAVRITHLPTNTVVQCQDGRSQHANKDQAMKQLKSKLYELEMQERNKEKQDLEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E T+ DVLDG+LD F++A+L Sbjct: 313 KSDIGWGHQIRSYVLDQSR-IKDLRTGVESTNTQDVLDGNLDKFIEASL 360 >gi|262377202|ref|ZP_06070427.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145] gi|262307940|gb|EEY89078.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145] Length = 310 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 170/307 (55%), Positives = 223/307 (72%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N ++ + + +L D LL+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVLNVLDRLSTQLEDAQALLDLAVEADDESLLEDVQAELSTAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + + D N YLE+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E DG+ AG Sbjct: 61 RRMFNNPMDPNPCYLEIQAGSGGTEAQDWASMLLRMYLRWIERHGFKAEVMEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEIEI+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+ KR E A E SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 KFIEASL 306 >gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748] gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748] Length = 330 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 170/320 (53%), Positives = 229/320 (71%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ + +E L NA+ K++ + D ++LE+A+EEDD S+ E D Sbjct: 3 DPTFWDDPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDRSLEGEIKDY 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +Q+I+ VE ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK F Sbjct: 63 VQQIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKAGFS 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAG KSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ V Sbjct: 123 IELMDEQPGDEAGTKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ + Sbjct: 183 MPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGIVVQCQTQRSQMQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY +VKD RT +E Sbjct: 243 NREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTGVE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG+LD FM+ L Sbjct: 303 TGNVQSVMDGNLDQFMEGFL 322 >gi|225016122|ref|ZP_03705355.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum DSM 5476] gi|224951119|gb|EEG32328.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum DSM 5476] Length = 375 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 175/354 (49%), Positives = 238/354 (67%), Gaps = 4/354 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L D D VQ ++ L P W ++ ++ ++++ L N I+ ++I Sbjct: 19 LKPKIQQLRAALDVDALVQEVAQLEETAAQPGFWDDLDNSQKVLQKTTRLKNTIAEFEKI 78 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+E A EEDD S E NL+ I+ +V+ ++ +LLSGE D+N+A L H Sbjct: 79 ESLYEDTQTLVEFAFEEDDESCSDEVKANLKSIQDQVDAQRLATLLSGEYDANNAILTFH 138 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DW ML RMY+ WAE+ F+T+ L+ +GEEAGIKS ++LI G NAYG+LK Sbjct: 139 AGAGGTEAMDWVEMLFRMYSHWAERHGFQTKTLDFVEGEEAGIKSISILIVGTNAYGFLK 198 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SP+DS+ RRHTSF+S+ V P VDDSIE+EI D R+DTYR+SGAGGQH Sbjct: 199 SETGVHRLVRVSPFDSSGRRHTSFASLEVIPEVDDSIEVEIRPEDLRVDTYRSSGAGGQH 258 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-- 300 VN T+SA+RITH+PTG+V CQ ERSQ +N+A A ML++KL +E+++RE + I + Sbjct: 259 VNKTESAIRITHLPTGIVTACQNERSQMQNRAVAMKMLKSKL--IEIKEREHLDKISDIK 316 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIRSYV PY +VKD RT E + S V+DGDLD F+ A L K Sbjct: 317 GEQKEIAWGSQIRSYVFMPYTLVKDHRTGFENGNISAVMDGDLDGFINAYLVAK 370 >gi|145589652|ref|YP_001156249.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048058|gb|ABP34685.1| bacterial peptide chain release factor 2 (bRF-2) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 167/342 (48%), Positives = 245/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL+ +N+ EDP +W + +A+ L +E++ LD ++ + ++ + Sbjct: 5 FGGIFDFDVKSRRLTEVNSILEDPTIWDDQKKAQALGKEKKLLDGVVATLTDLNTNITGA 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + L ++A EE D + ++Q + +F + E DS + ++++ AGAGGTE Sbjct: 65 IELFDMAKEESDFETIAAIEQDVQSYSKLIGDLEFRRMFHNEMDSCNCFIDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+ML R Y ++ E++ +KTE LE DG+ AGIKSAT+ + G AYG L+ E GVHR Sbjct: 125 ACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS++ RHTSF+SI+VYP +DDSIEI+++ +D R DTYRASGAGGQH+N TDSA Sbjct: 185 LVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIDVNPADIRTDTYRASGAGGQHINKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE E+QKR + E+SKT++GWG Sbjct: 245 VRLTHLPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 305 HQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 345 >gi|56459931|ref|YP_155212.1| protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR] gi|56178941|gb|AAV81663.1| Protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR] Length = 351 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 182/342 (53%), Positives = 241/342 (70%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D ++RL + + E P++W + +A+ L +ER L+ + + ++Q L D Sbjct: 7 LGGIFDYDAKLERLEEVTREMEQPNVWDDPPKAQALGKERAALEQVVQTLDKLQQGLDDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L++LA+E +D E + L + ++E +F + S + DS D YL++ +G+GGTE Sbjct: 67 EGLVDLAVEAEDEDTFNEAHEELSGLVKQLEALEFRRMFSKDNDSADCYLDIQSGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY RWAE FK E E+ +G+ AGIKSAT+ + G AYGWL+ E GVHR Sbjct: 127 AQDWANMLLRMYLRWAEAHDFKAEITELSEGDVAGIKSATVRVVGEYAYGWLRTETGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++VYP VDD I+IEI SD R+DTYRASGAGGQHVN TDSA Sbjct: 187 LVRKSPFDSGNRRHTSFASVFVYPEVDDDIDIEIDPSDLRVDTYRASGAGGQHVNRTDSA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH PTG+VVQCQ +RSQHKN+ A L+AKLYE ELQK+ E E SK +IGWG Sbjct: 247 VRLTHEPTGIVVQCQSDRSQHKNRDSAMKQLKAKLYEFELQKQNEEKQALEDSKADIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT IE + VLDG LD F++A+L Sbjct: 307 SQIRSYVLDDAR-IKDLRTGIENRNTQAVLDGALDPFIEASL 347 >gi|299768411|ref|YP_003730437.1| peptide chain release factor 2 [Acinetobacter sp. DR1] gi|298698499|gb|ADI89064.1| peptide chain release factor 2 [Acinetobacter sp. DR1] Length = 310 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 167/307 (54%), Positives = 225/307 (73%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSAAEDELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRA+L Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 RFIEASL 306 >gi|237747768|ref|ZP_04578248.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13] gi|229379130|gb|EEO29221.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13] Length = 349 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 172/341 (50%), Positives = 240/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ +L +N + EDP +W + +A+ L +E++ L+N + + I+ L D Sbjct: 6 GGIFDFAAKSDKLEQVNAELEDPDVWNDPKKAQDLGKEKKSLENVVLSLTRIKSGLDDAA 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+A EE D L+ D+ + ++E +F + S D + ++++ AGAGGTE+ Sbjct: 66 ELFEMAKEEQDDDTLKAVDDDTLELLDQIEKLEFRRMFSNPMDPCNCFIDIQAGAGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+M+LR Y R+ E++ F LE DGE AGIK+AT+ ++G AYG+L+ E GVHRL Sbjct: 126 QDWASMILRQYLRYCERKGFNATILEQSDGEVAGIKTATIKVEGDYAYGYLRTETGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS++ RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSAV Sbjct: 186 VRKSPFDSSNGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+VVQCQ +RSQH+N+A AW ML+++L+ELEL+KR E SKT++GWG Sbjct: 246 RLTHAPTGIVVQCQNDRSQHRNRADAWEMLKSRLFELELRKRMSEQQKLEDSKTDVGWGH 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN E + VLDGDLDDF+ +L Sbjct: 306 QIRSYVLDNSR-IKDLRTNHETGNTKAVLDGDLDDFILESL 345 >gi|32266159|ref|NP_860191.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449] gi|81666133|sp|Q7VIE6|RF2_HELHP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|32262209|gb|AAP77257.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449] Length = 366 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 169/321 (52%), Positives = 224/321 (69%), Gaps = 3/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 +D H W + A + ++++ + + + + D L L E+A+ E+D L+ + Sbjct: 41 QDEHFWNDSKRAAEVAKQKRKCERMLQTYTNTKQEIDDALELYEIAMSEEDSRTLELLFE 100 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + ++ + E +LSGE D ++A + + GAGGTESQDWA++L RMY RW+E+R F Sbjct: 101 QAPSLLSHIQKVEIEVMLSGENDGSNAIITIQPGAGGTESQDWASILYRMYLRWSERRGF 160 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E L+ DGEEAGIK +IKG NAYG+ K E GVHRLVRISP+D+N++RHTSF+S+ Sbjct: 161 KVELLDYQDGEEAGIKGVAFIIKGENAYGYAKSENGVHRLVRISPFDANAKRHTSFASVQ 220 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +DD I IEI + D RIDTYRASGAGGQHVN T+SA+RITH PTG+VVQCQ +RSQH Sbjct: 221 VSPELDDDINIEIEDKDIRIDTYRASGAGGQHVNKTESAIRITHFPTGIVVQCQNDRSQH 280 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNKA A ML++KLYELELQK +E A+ K+EIGWG QIRSYVL PYQ VKDLRT Sbjct: 281 KNKATAMKMLKSKLYELELQKNQEGAS---QEKSEIGWGHQIRSYVLAPYQQVKDLRTQF 337 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 + S VLDGD+D+ +++ L Sbjct: 338 ATSDTSGVLDGDIDEIIESVL 358 >gi|310829208|ref|YP_003961565.1| peptide chain release factor 2 [Eubacterium limosum KIST612] gi|308740942|gb|ADO38602.1| peptide chain release factor 2 [Eubacterium limosum KIST612] Length = 310 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 173/291 (59%), Positives = 218/291 (74%), Gaps = 3/291 (1%) Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +++D L D L++ EL D+ + E D ++ E+E + E+LLSGE DSN+A + Sbjct: 16 KLKDNLDDILVMFELI---DEGEEMDELPDTIEAFGKELEKFKLETLLSGEYDSNNAIIS 72 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTESQDWA MLLRMYTRWAE++ FK ++L++ G+ AGIKSATLLI+G NAYG+ Sbjct: 73 LHPGAGGTESQDWAEMLLRMYTRWAERKGFKVKSLDLQPGDVAGIKSATLLIEGINAYGY 132 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+ D R+DTYRASGAGG Sbjct: 133 LKTERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINPDDIRVDTYRASGAGG 192 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T SA+RITHIPTGVVVQCQ ERSQH+NK A NML+ KL E+ Q+++E + Sbjct: 193 QHVNKTSSAIRITHIPTGVVVQCQNERSQHQNKEVAMNMLKGKLVEIMEQEQKEKLDDVV 252 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++I WG QIRSYV PY MVKD RTN+E + V+DGDLD FM A L Sbjct: 253 GDYSQIAWGSQIRSYVFHPYNMVKDHRTNVEVGNIQSVMDGDLDQFMNAYL 303 >gi|312884019|ref|ZP_07743736.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368477|gb|EFP96012.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC BAA-2122] Length = 332 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 173/326 (53%), Positives = 233/326 (71%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N + E P +W A+ L +ER L+ + I ++ + D LLELA+EE+D Sbjct: 4 VNAELEQPDVWNEPERAQALGKERSSLEAVVETIDQLNQGVEDVEGLLELAVEEEDQETF 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L ++ ++E +F + SG+ DS+D Y+++ +G+GGTE+QDW +MLLRMY RWA Sbjct: 64 DEIEPELIELEFKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMLLRMYLRWA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + FKTE +E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTS Sbjct: 124 EAKGFKTEVIEVSEGEVAGLKGATIKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S ++YP +DD+I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ Sbjct: 184 FASAFIYPEIDDNIQIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQN 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQHKNK QA LRAKL+ELE+QK+ E +K++IGWG QIRSYVL + +KD Sbjct: 244 DRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKD 302 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT IE + VLDGDLD F++A+L Sbjct: 303 LRTGIENRNTQAVLDGDLDKFIEASL 328 >gi|225077011|ref|ZP_03720210.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens NRL30031/H210] gi|261379582|ref|ZP_05984155.1| peptide chain release factor 2 [Neisseria subflava NJ9703] gi|224951568|gb|EEG32777.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens NRL30031/H210] gi|284798056|gb|EFC53403.1| peptide chain release factor 2 [Neisseria subflava NJ9703] Length = 367 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 176/341 (51%), Positives = 242/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNIATGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+A+EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMAVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|218890021|ref|YP_002438885.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa LESB58] gi|218770244|emb|CAW26009.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa LESB58] Length = 303 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 168/296 (56%), Positives = 224/296 (75%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ L D+ LL++A+EEDD + + ++ ++R++ +E +F + SGE D N Sbjct: 5 VETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPN 64 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +AYL++ AG+GGTE+QDWANMLLRMY RWA+K F +E+ +GE AGIK AT+ IKG Sbjct: 65 NAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGE 124 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+ Sbjct: 125 YAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRS 184 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR Sbjct: 185 SGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAA 244 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E SK++IGWG QIRSYVL + +KDLRT IE++ VLDGDLD++++A+L Sbjct: 245 SQALEDSKSDIGWGHQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLDEYLEASL 299 >gi|241760713|ref|ZP_04758805.1| peptide chain release factor 2 [Neisseria flavescens SK114] gi|241318894|gb|EER55420.1| peptide chain release factor 2 [Neisseria flavescens SK114] Length = 367 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 176/341 (51%), Positives = 242/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNIATGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+A+EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMAVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|119897788|ref|YP_933001.1| peptide chain release factor 2 [Azoarcus sp. BH72] gi|119670201|emb|CAL94114.1| peptide chain release factor [Azoarcus sp. BH72] Length = 373 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 237/341 (69%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +L +N EDP +W + A+ L +E++ L+ + +++I+ + D Sbjct: 30 GGIFDYDEKSSKLEEVNRALEDPAVWNDAARAQELGKEKRQLEGVVLTLQQIEQQSADLK 89 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L +LA E D + +L ++ V +F + S D N ++E+ AGAGGTE+ Sbjct: 90 DLFDLADMEGDDDTFEAVEGDLVGLEALVGQLEFRRMFSNPMDPNACFIEIQAGAGGTEA 149 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML RMY R+ EK+ F E +E +GE AGIK+ T+ G AYG+L+ E G+HRL Sbjct: 150 QDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFTGDYAYGFLRTETGIHRL 209 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 210 VRKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 269 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH+NK +A +ML+A+LYELEL+KR+ E +K++IGWG Sbjct: 270 RITHQPTGIVVQCQNDRSQHRNKDEAMSMLKARLYELELRKRQAEQQKLEDAKSDIGWGH 329 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDL+DF+ A+L Sbjct: 330 QIRSYVLDQSR-IKDLRTGYEVGNTQAVLDGDLEDFIAASL 369 >gi|71281667|ref|YP_270738.1| peptide chain release factor 2, programmed frameshift [Colwellia psychrerythraea 34H] gi|123631202|sp|Q47WT4|RF2_COLP3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|71147407|gb|AAZ27880.1| peptide chain release factor 2, programmed frameshift [Colwellia psychrerythraea 34H] Length = 365 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 172/350 (49%), Positives = 239/350 (68%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + N L G D+D +RL ++ + E P +W A+ L +ER L+ ++ I E Sbjct: 13 EIRERANLLRGYLDYDVKAERLVEVSRELELPDVWNEPERAQALGKERSSLEEVVNTIVE 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D L+ELA+EE D + + +E +F + SGE D+N++YL++ Sbjct: 73 LETGCEDIEGLVELAVEESDQETFDDAEVEADALDKVLEKLEFRRMFSGEQDANNSYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWA ML+RMY RW E +KTE +E+ DG+ AGIK T+ G AYGWL Sbjct: 133 QSGSGGTEAQDWAEMLMRMYLRWGEAHGYKTEVIEVTDGDVAGIKGCTIKYTGEYAYGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+IEI+I+ +D RIDT+RASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIEIDINPADLRIDTFRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSA+RITH PTG VV CQ +RSQHKN+A A +L+AKLYE+E+QK+ + E Sbjct: 253 HVNKTDSAIRITHEPTGAVVACQADRSQHKNRATAMKLLKAKLYEMEMQKQNSDKQVLED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 GKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFLEASL 361 >gi|157828246|ref|YP_001494488.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932947|ref|YP_001649736.1| peptide chain release factor 2 [Rickettsia rickettsii str. Iowa] gi|157800727|gb|ABV75980.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908034|gb|ABY72330.1| bacterial peptide chain release factor 2 (RF-2) [Rickettsia rickettsii str. Iowa] Length = 285 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 166/279 (59%), Positives = 211/279 (75%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A E+D L + +L+ + + + E L SGEAD N+ +LE++AGAGGTES DWA Sbjct: 1 MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHRLVRIS Sbjct: 61 SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S W+YP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH Sbjct: 121 PFNAAGKRMTSFASSWIYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRS Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVLQPYQMVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279 >gi|238650499|ref|YP_002916351.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic] gi|238624597|gb|ACR47303.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic] Length = 285 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 167/279 (59%), Positives = 212/279 (75%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A E+D L + +L+ + + + E L SGEAD N+ +LE++AGAGGTES DWA Sbjct: 1 MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHRLVRIS Sbjct: 61 SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAIIIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG+V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRS Sbjct: 181 IPTGMVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVLQPYQMVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279 >gi|134095412|ref|YP_001100487.1| peptide chain release factor 2 [Herminiimonas arsenicoxydans] gi|133739315|emb|CAL62364.1| Peptide chain release factor 2 (RF-2) [Herminiimonas arsenicoxydans] Length = 325 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 173/321 (53%), Positives = 232/321 (72%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 EDP +W + A+ L +E++ L+ + + ++ L D L E+A EE+D + Sbjct: 2 EDPKVWDDPKRAQDLGKEKKSLEAIVHTLIKVDAELKDAHDLFEMAREENDEDTIVAIEA 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + VE +F + SG D+N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ F Sbjct: 62 DTQELLKTVEGMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQYLRYCERKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E LE DGE AGIK+ATL ++G AYG L+ E GVHRLVR SP+DS + RHTSFSS++ Sbjct: 122 KVEILEQSDGEVAGIKTATLKVEGEYAYGLLRTETGVHRLVRKSPFDSANGRHTSFSSLF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVR+TH P+G+VVQCQ +RSQH Sbjct: 182 VYPEVDDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQCQNDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NKA+AW+ML+AKL+ELE++ R E SKT++GWG QIRSYVL + +KDLRTN Sbjct: 242 RNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWGHQIRSYVLDQSR-IKDLRTNF 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDGDLDDF+ A+L Sbjct: 301 ETGNTKAVLDGDLDDFIAASL 321 >gi|107103215|ref|ZP_01367133.1| hypothetical protein PaerPA_01004284 [Pseudomonas aeruginosa PACS2] gi|254236611|ref|ZP_04929934.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719] gi|313109107|ref|ZP_07795079.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa 39016] gi|126168542|gb|EAZ54053.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719] gi|310881581|gb|EFQ40175.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa 39016] Length = 300 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 168/296 (56%), Positives = 224/296 (75%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ L D+ LL++A+EEDD + + ++ ++R++ +E +F + SGE D N Sbjct: 2 VETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPN 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +AYL++ AG+GGTE+QDWANMLLRMY RWA+K F +E+ +GE AGIK AT+ IKG Sbjct: 62 NAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+ Sbjct: 122 YAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRS 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR Sbjct: 182 SGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAA 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E SK++IGWG QIRSYVL + +KDLRT IE++ VLDGDLD++++A+L Sbjct: 242 SQALEDSKSDIGWGHQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLDEYLEASL 296 >gi|268679078|ref|YP_003303509.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM 6946] gi|268617109|gb|ACZ11474.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM 6946] Length = 364 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL+ +++ + + + +RL + +DP W + A + +E+ L++ ++ + Sbjct: 12 KLTTKVDNIAQIIKPEEIAKRLGEIEAIEQDPEFWNDAKRAAEMQKEKTALNSLLNRYTK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D + L E+A E+D + ++E ++ QR++ + + +LSGE D+ +A + + Sbjct: 72 AKNVVSDAVDLYEMANAENDETTIEELFNDAQRVEDHITNLEIAMMLSGENDTKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA++L RMY RWAE+ FK E L+ +GEEAGIK + +I G NAYG+L Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERSGFKVEVLDYQEGEEAGIKDVSFIISGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+D+N++RHTSFSS+ V P VDD I+I + + D ++DTYRASGAGGQ Sbjct: 192 KVENGIHRLVRISPFDANAKRHTSFSSVMVSPEVDDDIDIVLEDRDLKVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSA+RITH+PTG+VVQCQ +RSQHKN+A A ML+++LYELEL+K++ A Sbjct: 252 HVNKTDSAIRITHMPTGIVVQCQNDRSQHKNRASAMKMLKSRLYELELEKQQ--AEKDGI 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+NI + + +LDGD+ ++ L +K Sbjct: 310 EKSEIGWGHQIRSYVLAPYQQVKDNRSNIAYSQVNAILDGDISKVIEDVLIAQK 363 >gi|7688054|emb|CAB89696.1| putative peptide release factor 2 [Xanthomonas campestris pv. campestris] Length = 374 Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 179/349 (51%), Positives = 243/349 (69%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G D+D +RL ++ + E P +W + A+ L RER L+ + I ++ Sbjct: 14 LNDRVLSLRGYLDYDVKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL+LA E D +L + + VE +F+ + SG+ D +A++++ Sbjct: 74 LAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQMDGANAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+ GE AGIKSAT+ I+G AYGWLK Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIRIEGEYAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT VV CQ RSQH+N+ A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNVERDALEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIR+YVL + +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 361 >gi|319638812|ref|ZP_07993570.1| peptide chain release factor 2 [Neisseria mucosa C102] gi|317399716|gb|EFV80379.1| peptide chain release factor 2 [Neisseria mucosa C102] Length = 367 Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 176/341 (51%), Positives = 242/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+A+EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMAVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEDGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|78485070|ref|YP_390995.1| peptide chain release factor 2 [Thiomicrospira crunogena XCL-2] gi|78363356|gb|ABB41321.1| bacterial peptide chain release factor 2 (bRF-2) [Thiomicrospira crunogena XCL-2] Length = 332 Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 170/321 (52%), Positives = 230/321 (71%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 EDP +W + A+ L +E+ LDN ++ I++++ L +LE+A + D ++ E Sbjct: 9 EDPTVWNDPERAQALGKEKSQLDNVVTTIQDLESSLESAHEILEMAEMDADQEMVDEVVS 68 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L R++ ++E +F+ + SGE D+N+ YLE+ AG+GGTE+QDWANM+LRMY RWAE F Sbjct: 69 ELARLEEKLEQLEFQRMFSGELDANNCYLEIQAGSGGTEAQDWANMILRMYLRWAESHGF 128 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E LEI G+ AGIK AT+ ++G A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++ Sbjct: 129 KAEILEISAGDVAGIKGATVHVQGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVF 188 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P +DDS E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT V QCQ RSQH Sbjct: 189 ISPEIDDSFEVEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNTVTQCQNGRSQH 248 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NKA+A LRAKLYELE+ R E +K++IGWG QIRSYVL + +KDLRTN+ Sbjct: 249 QNKAEAMKQLRAKLYELEMLSRNAEKQEMEENKSDIGWGSQIRSYVLDSGR-IKDLRTNV 307 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + + VLDGDLD F+ +L Sbjct: 308 ETGNTNGVLDGDLDQFIIPSL 328 >gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii] gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira defluvii] Length = 377 Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 176/341 (51%), Positives = 233/341 (68%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD L+ + KT P W++ A + R + LD +S ++ + R D Sbjct: 17 GGIFDLARMTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDRELSRWRDTERRQNDIE 76 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELALE D + QE L+ + V + E LLSGE DS++A +H GAGGTES Sbjct: 77 ALLELALESGDAGLEQELLAELEPFEKAVAQFRIELLLSGELDSSNAIFAIHPGAGGTES 136 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RWAE++ FK E L++ G+EAGIKSATL + GP AYG+LK E GVHRL Sbjct: 137 QDWAQMLLRMYVRWAEQKGFKVETLDLLAGDEAGIKSATLSVSGPYAYGYLKAEAGVHRL 196 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N RRHTSF+S++VYP ++D +++ I + D R+DT+RA GAGGQ+VN ++A+ Sbjct: 197 VRISPFDANKRRHTSFASVFVYPELEDDVQVVIDDKDLRVDTFRAGGAGGQNVNKVETAI 256 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+VVQCQ ERSQ +N+ A +L+A+L+E+E +K+E N K +I WG Sbjct: 257 RITHIPTGIVVQCQNERSQLQNRNGAMKILKARLFEVEQRKKEAEFNAIVGEKKDIAWGS 316 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV QPYQMVKD RT E S V+DG+LD F++A L Sbjct: 317 QIRSYVFQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAYL 357 >gi|114320956|ref|YP_742639.1| peptide chain release factor 2 [Alkalilimnicola ehrlichii MLHE-1] gi|114227350|gb|ABI57149.1| bacterial peptide chain release factor 2 (bRF-2) [Alkalilimnicola ehrlichii MLHE-1] Length = 354 Score = 352 bits (902), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 176/342 (51%), Positives = 245/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E P +W + A+ L RER L+ + + + L D Sbjct: 10 LGGIFDYDLKRERLEEVTRELEQPEVWNDPERAQSLGRERAQLEGLVETFERLDSVLGDA 69 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLE+A +E D + +L + E++ +F + SGE D +A++++ AGAGGTE Sbjct: 70 DELLEMAADEGDEETVAALQSDLGDCERELQKLEFRRMFSGEMDPANAFMDIQAGAGGTE 129 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY RW E+ FKTE +E+ +G+EAGIKSAT+ +G A+GWL+ E G+HR Sbjct: 130 AQDWANMLLRMYLRWGERHGFKTEIIELSEGDEAGIKSATVKFEGEYAFGWLRTEIGIHR 189 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++V P VDD ++I+I+ +D R+D YRASGAGGQHVN T+SA Sbjct: 190 LVRKSPFDSGNRRHTSFASVFVSPEVDDDVDIDINPADLRVDVYRASGAGGQHVNRTESA 249 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+P+G+VVQCQQ+RSQHKN+A A L++KL+ELE+QKR + A E +K++IGWG Sbjct: 250 VRITHMPSGIVVQCQQDRSQHKNRATAMKQLKSKLFELEMQKRRDEAEAVEGTKSDIGWG 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 310 NQIRSYVLDQSR-IKDLRTGVEVGNTQAVLDGDLDQFIEASL 350 >gi|119505213|ref|ZP_01627288.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium HTCC2080] gi|119458904|gb|EAW40004.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium HTCC2080] Length = 347 Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 175/343 (51%), Positives = 230/343 (67%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 C GG+FD+ RL+ + + +P +W A+ L +ER L+ + I ++ D Sbjct: 2 CSGGIFDYAEKKDRLAEVELELAEPSVWDEPERAQALGKERASLELVVKTIDDLDRGSTD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LLE+A+ EDD + + + ++E +F + SGE D N+AYL+V +G+GGT Sbjct: 62 SHDLLEMAVAEDDIDTADMVASDTSDLIAQLEKLEFRRMFSGEMDPNNAYLDVQSGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW MLLRMY RW E + FK +E GE AG+KSAT+ +G A+GWL+ E GVH Sbjct: 122 EAQDWTEMLLRMYLRWGESKGFKARVVEASAGEVAGLKSATVQFEGEYAFGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+SI+V P +DD+IEI+I+ +D R+DTYR+SGAGGQHVNTTDS Sbjct: 182 RLVRKSPFDSGGRRHTSFASIFVSPEIDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH PT VV CQ ERSQH+NK A LRAKLYELE+ KR E SK +IGW Sbjct: 242 AVRITHEPTNTVVSCQTERSQHQNKDNAMKQLRAKLYELEVLKRSADKQALEDSKADIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDDAR-IKDLRTQVETRNTQAVLDGDLDKFIEASL 343 >gi|300114892|ref|YP_003761467.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113] gi|299540829|gb|ADJ29146.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113] Length = 331 Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 172/319 (53%), Positives = 227/319 (71%), Gaps = 1/319 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P +W A+ L +ER L + +S + E+ + + L ELA+EEDD QE L Sbjct: 10 PSVWDEPERAQQLGQERAQLQSVVSPLAELGEEIMQAKELFELAVEEDDEGTAQEMIAEL 69 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++ + +F+ + +GE D N+AYL++ AG+GGTE+QDWA+MLLRMY RW EK FKT Sbjct: 70 DAVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWASMLLRMYLRWGEKHDFKT 129 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E+ +GE AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++VY Sbjct: 130 GLTEVSEGEVAGIKSATIHFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVY 189 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+ + +VVQCQ ERSQH+N Sbjct: 190 PEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLSSNLVVQCQSERSQHQN 249 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 KA A LRAKLYELE++ R+ E +K +IGWG QIR+YVL + +KDLRT +E Sbjct: 250 KAHAMAQLRAKLYELEMRSRQAEKQAAEEAKADIGWGSQIRNYVLDQSR-IKDLRTGVEI 308 Query: 333 TSPSDVLDGDLDDFMKATL 351 + VLDGDLD F++A+L Sbjct: 309 GNTQGVLDGDLDPFIEASL 327 >gi|157825493|ref|YP_001493213.1| peptide chain release factor 2 [Rickettsia akari str. Hartford] gi|157799451|gb|ABV74705.1| peptide chain release factor 2 [Rickettsia akari str. Hartford] Length = 285 Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 164/279 (58%), Positives = 209/279 (74%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A E+D L + +L+ + + + E L SGEAD N+ +LE++AGAGGTES DWA Sbjct: 1 MAASENDLETLSQIEQDLKNLSILAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++++RMY R+AE+ FKTE + + +GEE GIKS T+ I G AYGW K E GVHRLVRIS Sbjct: 61 SIMMRMYLRFAERLGFKTEIINMLNGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH Sbjct: 121 PFNAAGKRMTSFASSWVYPAIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRS Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDSSWGYQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 Y+L PYQMVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 241 YILHPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279 >gi|168051671|ref|XP_001778277.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670374|gb|EDQ56944.1| predicted protein [Physcomitrella patens subsp. patens] Length = 387 Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 165/351 (47%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++R ++ + +W + R+ L+ + P+LW+N +A RER L + + + Sbjct: 32 VARSIDLIKARLEWKKLLARVQELDVELAKPNLWENAAKAGQFSRERGALSGQVKSVISM 91 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +D L +++ L ELA EE+D ++ + + L ++ ++ +LLSGE DS ++EV Sbjct: 92 EDELLEHVGLAELAHEENDTQVVTDVTQGLAELRKTASERELVALLSGEHDSRSCFIEVQ 151 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++RMY WA+ R ++ ++ GEEAGIK AT+ + G AYG+ K Sbjct: 152 AGAGGTESMDWAAMVMRMYRMWAQTRDYEVTVVDEMPGEEAGIKRATIRVDGLYAYGYAK 211 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+D+ RRHTSF+++ V P +D+S + IEI ESD RI+ +RA GAGGQ Sbjct: 212 TEAGVHRLVRISPFDAGKRRHTSFAAVAVIPALDESEVSIEIGESDLRIERFRAGGAGGQ 271 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRI HIPTG+V QCQ +RSQH+NKA A +ML+++L+++E+ +R + Sbjct: 272 HVNKTESAVRIIHIPTGIVTQCQADRSQHRNKATALSMLQSRLHQMEVTRRAKANAQHTQ 331 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S +++ WG QIRSYVLQPYQMVKDLRTN E + PS +LDG++D F+ A LA Sbjct: 332 SLSDVSWGNQIRSYVLQPYQMVKDLRTNYEVSDPSSILDGEIDGFIMAYLA 382 >gi|319795017|ref|YP_004156657.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS] gi|315597480|gb|ADU38546.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS] Length = 367 Score = 351 bits (901), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 169/338 (50%), Positives = 242/338 (71%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +RL +N EDP++W + +A+ L RE++ LD+ + + + + L DN L Sbjct: 27 LDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRLTNGLSDNSELF 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E++ EE D LQ SD+ ++ +++ +F + + AD +A++++ AGAGGTE+ DW Sbjct: 87 EMSKEEGDMDGLQSISDDAATLEADIKQLEFRRMFNNPADPLNAFVDIQAGAGGTEACDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLR Y ++AE++ FKT+ + G+ AGIK AT+ ++G A+G L+ E GVHRLVR Sbjct: 147 ASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLRTETGVHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS+ RHTSF+SI+VYP +DDSIEI+I+ SD R DT+RASGAGGQH+N TDSAVR+T Sbjct: 207 SPFDSSGGRHTSFASIFVYPEIDDSIEIDINPSDVRTDTFRASGAGGQHINKTDSAVRLT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E E SKT++GWG QIR Sbjct: 267 HIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDSKTDVGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 327 SYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363 >gi|253997054|ref|YP_003049118.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8] gi|253983733|gb|ACT48591.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8] Length = 367 Score = 351 bits (901), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 176/350 (50%), Positives = 245/350 (70%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + L G D+++ QRL +N EDP +W + +++ L +E++ L+ ++ + + Sbjct: 16 LSERNHALRGYLDFESKSQRLEEVNGLLEDPKIWDDNAKSQALGKEKRTLELVVNTLIHV 75 Query: 63 QDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 Q L D L E+A EE DD ++L D+L ++ E+ +F + SGE DS + ++E Sbjct: 76 QGGLKDAQELFEMAREENDDDTLLSVEHDSLA-LEKEIAEMEFRRMFSGELDSANCFIEF 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANMLLRMY R+ E++ FK E LE +G+ AGIK A++ + G AYG L Sbjct: 135 QSGSGGTEAQDWANMLLRMYLRYCERKGFKVEVLEESEGDVAGIKGASIKVSGDYAYGTL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DSN++RHTSF+S+ ++P VDDSIEI+I+ +D R+DTYRASGAGGQ Sbjct: 195 RTENGVHRLVRKSPFDSNAKRHTSFASVQIFPEVDDSIEIDINPADLRVDTYRASGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSAVRITHIPT VVQCQ +RSQH+N+ +A NML+ LY LEL KR + E Sbjct: 255 HINKTDSAVRITHIPTNTVVQCQNDRSQHRNREEAMNMLKGALYNLELNKRNQEKQALED 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +KT+IGWG QIRSYVL + +KDLRT +E + VLDGDLD F+ +L Sbjct: 315 AKTDIGWGHQIRSYVLDQSR-IKDLRTGVEIGNTQGVLDGDLDPFITESL 363 >gi|34580696|ref|ZP_00142176.1| peptide chain release factor RF-2 [Rickettsia sibirica 246] gi|28262081|gb|EAA25585.1| peptide chain release factor RF-2 [Rickettsia sibirica 246] Length = 285 Score = 351 bits (901), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 166/279 (59%), Positives = 210/279 (75%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A E+D L + +L+ + + + E L SGEAD N+ +LE++AGAGGTES DWA Sbjct: 1 MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHRLVRIS Sbjct: 61 SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTETGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRS Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVLQPY MVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 241 YVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279 >gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.] Length = 344 Score = 351 bits (901), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 167/343 (48%), Positives = 239/343 (69%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD DN +RL+ + + W+N +A L++ER + + K + L + IL Sbjct: 1 MFDLDNKEKRLNEIEFLISKDNFWENHDKATPLLKERTFISGKVESFKSLLKDLEECEIL 60 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LA+EE D ++E S +Q++K ++ +L GE D N+A + ++AGAGGTE+QD Sbjct: 61 YSLAIEESDSKTIEEVSVQIQKLKEKINKLSLLLMLDGEDDINNAIVSINAGAGGTEAQD 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W+ +L RMY+RW EK+ FK+ ++ G+EAGIKS T+ ++G AYG+LK E GVHRLVR Sbjct: 121 WSEILFRMYSRWIEKKGFKSTIIDFQPGDEAGIKSVTITVEGDYAYGYLKTEIGVHRLVR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +RHTSF+S++VYP +D+SIEI+I E D RID +R+SGAGGQHVN T SA+RI Sbjct: 181 ISPFNANGKRHTSFASVFVYPELDNSIEIDIDEKDLRIDIFRSSGAGGQHVNKTSSAIRI 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VVQCQQERSQHKNK A ++L+++LY+LE QK+++ K EI WG QI Sbjct: 241 THLPTGIVVQCQQERSQHKNKDMAMSVLKSRLYQLEKQKQDDKMQEIHDGKDEIAWGNQI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RSYVL PYQ++KD R N+E + + VLDG +D F++ L +K Sbjct: 301 RSYVLHPYQLIKDHRINLETGNAAAVLDGAIDPFIEGVLLSRK 343 >gi|242309101|ref|ZP_04808256.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489] gi|239524525|gb|EEQ64391.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489] Length = 364 Score = 351 bits (901), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 172/330 (52%), Positives = 227/330 (68%), Gaps = 4/330 (1%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R+ + T + W++ +A +E++ + + +E L D L E++ DD Sbjct: 32 RIKEIETLEQQKEFWEDSKKAGEYQKEKKRCERQLEKFQEANLALNDAKELFEIS--SDD 89 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 L E ++ +++ + E +LS E DSN+A + GAGGTESQDWA+ML RMY Sbjct: 90 EQTLNELFSEANSLEEQIKKAEIEVMLSDELDSNNAIFTITPGAGGTESQDWASMLYRMY 149 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RWAE+R FK E L+ +G+EAGIK A+ +IKG NAYG+ K E G+HRLVRISP+DSN++ Sbjct: 150 LRWAERRGFKVELLDYQEGDEAGIKDASFIIKGENAYGYAKVENGIHRLVRISPFDSNAK 209 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF+S+ V P +DD+IEIEI E D RIDTYRASGAGGQH+N T+SA+RITHIPTG+VV Sbjct: 210 RHTSFASVQVTPEIDDNIEIEIEEKDLRIDTYRASGAGGQHINKTESAIRITHIPTGIVV 269 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ +RSQHKNKA A ML++KLYELE QKR E K+EIGWG QIRSYVL PYQ Sbjct: 270 QCQNDRSQHKNKATALKMLKSKLYELEAQKRNE--QTSNDDKSEIGWGHQIRSYVLAPYQ 327 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +KDLR+NI ++ +LDGD+D ++ L Sbjct: 328 QIKDLRSNIAYSNVEAILDGDIDAILEGVL 357 >gi|56964831|ref|YP_176562.1| peptide chain release factor 2 [Bacillus clausii KSM-K16] gi|56911074|dbj|BAD65601.1| peptide chain release factor 2 [Bacillus clausii KSM-K16] Length = 328 Score = 351 bits (901), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 175/321 (54%), Positives = 224/321 (69%), Gaps = 2/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ E L + K++ + D + EL EEDD + E Sbjct: 3 DPDFWNDQEQAQAIINETNGLKEQVHTFKDMAESYDDLEVSYELVREEDDTELASELESG 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L +K ++ + + LLS D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEKR F Sbjct: 63 LAALKQKMNQFELQLLLSAPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKRGFA 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+++IE++ D +IDTYRASGAGGQHVNTTDSAVRITH+PT VV CQ ERSQ K Sbjct: 183 MPELDDAVDIELNSEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ QA M++AKLY+L ++++E E+A I + EIGWG QIRSYV PY MVKD RT Sbjct: 243 NREQAMKMMKAKLYQLRIEEQERELAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTGF 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + + V+DG++D F+ A L Sbjct: 302 EIGNTNSVMDGEIDGFIDAYL 322 >gi|330504612|ref|YP_004381481.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01] gi|328918898|gb|AEB59729.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01] Length = 304 Score = 351 bits (901), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 169/300 (56%), Positives = 222/300 (74%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + I ++ L D+ LLE+A EE+D + + ++R++ +E +F + SGE Sbjct: 2 LAQIVETIDDLTGSLADSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D+N+ YL++ AG+GGTE+QDWAN+LLRMY RWA+KR F E +E+ +GE AGIK AT+ Sbjct: 62 MDANNCYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E SK++IGWG QIRSYVL + +KDLRT +E++ VLDGDLD +++A+L Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDGYLEASL 300 >gi|317493835|ref|ZP_07952252.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918162|gb|EFV39504.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 320 Score = 351 bits (901), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 175/317 (55%), Positives = 224/317 (70%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W A+ L +ER L+ ++ I ++ L D LLELA+E DD E L + Sbjct: 1 MWNEPERAQALGKERSSLEEIVNTINQMTQGLDDVSGLLELAIEADDEETFNEAVVELDQ 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + ++ +F + SGE DS D Y+++ AG+GGTE+QDWA+MLLRM+ RWAE + FKTE Sbjct: 61 LDAKLAQLEFRRMFSGEYDSADCYIDIQAGSGGTEAQDWASMLLRMFLRWAEAKGFKTEI 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E DGE AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP Sbjct: 121 IEESDGEVAGLKSATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK Sbjct: 181 VDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA L+AKLYE E+QK+ + E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 241 QAMRQLKAKLYEYEMQKKNAEKQVMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 300 TQAVLDGDLDRFIEASL 316 >gi|328956713|ref|YP_004374099.1| peptide chain release factor 2 [Carnobacterium sp. 17-4] gi|328673037|gb|AEB29083.1| peptide chain release factor 2 [Carnobacterium sp. 17-4] Length = 351 Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 181/346 (52%), Positives = 242/346 (69%), Gaps = 2/346 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +GGLFD + + ++ N + +P W + +A+ ++ E L + K++ + Sbjct: 1 MGGLFDLETLERDIAEYNDRMTEPTFWDDAQKAQAIINEANELKEKYNQYKDLLTEKEEL 60 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +LLE+ EE+D +++E + +++ + E LLS D N+A +E+H GAGGTE Sbjct: 61 DLLLEMVKEENDEELVKELDSKINPFLDKLDQYELELLLSDPYDKNNAIIELHPGAGGTE 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDW N+LLRMYTRWAEKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHR Sbjct: 121 SQDWGNLLLRMYTRWAEKRGFKIETLDYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHR 180 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DS RRHTSF SI V P +DDS++I+I+ D ++DTYRASGAGGQH+NTTDSA Sbjct: 181 LVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKVDTYRASGAGGQHINTTDSA 240 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308 VRITH+PTGVVV Q +RSQ KN+ QA +ML+AKL++LE+++ E E+A I + EIGW Sbjct: 241 VRITHMPTGVVVASQAQRSQLKNREQAMSMLKAKLHQLEVEEHEKEMAAI-RGEQLEIGW 299 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYV PY MVKD RTN E + S V+DG +D F++A L K Sbjct: 300 GSQIRSYVFHPYSMVKDHRTNYETGNISQVMDGGIDPFIQAYLRSK 345 >gi|53802400|ref|YP_112836.1| peptide chain release factor 2, programmed frameshift [Methylococcus capsulatus str. Bath] gi|53756161|gb|AAU90452.1| peptide chain release factor 2, programmed frameshift [Methylococcus capsulatus str. Bath] Length = 365 Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 185/348 (53%), Positives = 245/348 (70%), Gaps = 2/348 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 SRQ + L G D+D +RL+ + + EDP +W N A+ L +ER L+ ++ + EI Sbjct: 16 SRQ-DALRGYLDFDTKQERLTEVLRELEDPRIWDNPERAQALGKERTQLEGVVNRLNEIA 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D LL+LA+EEDD ++ + +L + V +F + SGE D N+A+L++ A Sbjct: 75 AGIDDAAELLQLAVEEDDEDSVESVAADLAHYESVVAEMEFRRMFSGEMDPNNAFLDIQA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA ML RMY RW E++ FKTE +E GE AGIKSAT+ +G AYGWL+ Sbjct: 135 GSGGTEAQDWAQMLERMYLRWGERKGFKTELVEESPGEVAGIKSATIRFEGEYAYGWLRT 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I+I+I+ +D R D YRASGAGGQHV Sbjct: 195 ETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIDINPADLRTDVYRASGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITH+PTG+VVQCQ +RSQH N+ LRAKLYELE+QKR E SK Sbjct: 255 NRTESAVRITHLPTGIVVQCQNQRSQHANRDWCMKQLRAKLYELEMQKRNTEKQKLEDSK 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++IGWG QIRSYVL + +KDLRTN+E +P VLDGDLD F++A+L Sbjct: 315 SDIGWGSQIRSYVLDQSR-IKDLRTNVETGNPQAVLDGDLDMFIEASL 361 >gi|294668116|ref|ZP_06733223.1| peptide chain release factor 2 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309824|gb|EFE51067.1| peptide chain release factor 2 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 367 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 175/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|317497043|ref|ZP_07955371.1| peptide chain release factor 2 [Lachnospiraceae bacterium 5_1_63FAA] gi|316895703|gb|EFV17857.1| peptide chain release factor 2 [Lachnospiraceae bacterium 5_1_63FAA] Length = 333 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 173/323 (53%), Positives = 231/323 (71%), Gaps = 2/323 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W NV E++ +M+E + L + +++ + D L+++A E++D +++E + Sbjct: 2 EEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKYEDIETLIDMAEEDEDADLIEEATA 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + + E + +LL+GE D +DA L +HAGAGGTES DWA ML RM+TRWA K+ + Sbjct: 62 LMDEFEKTYEELRISTLLTGEYDKDDAILTLHAGAGGTESCDWAGMLYRMFTRWAGKKGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 TE L+ DG+EAGIKS T+ I G NAYG+L+ E+GVHRLVRISP+++ +R TSF+S Sbjct: 122 GTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + D IE+EI++ D RIDTYRASGAGGQH+N TDSA+RITH+PTG+VVQCQ ERSQH Sbjct: 182 VMPDIKDDIEVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHLPTGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KNK QA ML+ KLY L+ Q+ E++++I + GWG QIRSYVLQPY MVKD RTN Sbjct: 242 KNKDQAMKMLKTKLYLLKQQQHLEKLSDI-RGDVGDNGWGNQIRSYVLQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E +PS VLDGDLD FM A LA Sbjct: 301 FESGNPSAVLDGDLDGFMNAYLA 323 >gi|262380518|ref|ZP_06073672.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164] gi|262297964|gb|EEY85879.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164] Length = 310 Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 168/307 (54%), Positives = 223/307 (72%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ ++ + +L D +L+LA+E DD S+L + L + + +F Sbjct: 1 MAKEKGELENVINVLEGLSTQLEDAQAMLDLAVEADDESLLADVQAELSSAEEALAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH+PTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+ KR E A E SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 KFIEASL 306 >gi|261365043|ref|ZP_05977926.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996] gi|296313763|ref|ZP_06863704.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768] gi|288566638|gb|EFC88198.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996] gi|296839690|gb|EFH23628.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768] Length = 367 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 175/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|304396712|ref|ZP_07378592.1| peptide chain release factor 2 [Pantoea sp. aB] gi|304355508|gb|EFM19875.1| peptide chain release factor 2 [Pantoea sp. aB] Length = 351 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 179/342 (52%), Positives = 238/342 (69%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P++W A+ L +ER L+ + + ++ L D Sbjct: 7 FGGIFDYDAKKERLEEVNAELEQPYVWNEPERAQALGKERSSLEAIVQTLDQMSQGLEDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E +D E L ++ ++ +F + SGE DS D Y+++ AG+GGTE Sbjct: 67 QGLLELAVEAEDEETFDEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ E GVHR Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 307 SQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 347 >gi|302342486|ref|YP_003807015.1| LigA [Desulfarculus baarsii DSM 2075] gi|301639099|gb|ADK84421.1| LigA [Desulfarculus baarsii DSM 2075] Length = 371 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 174/350 (49%), Positives = 234/350 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L + D ++ +RL+ L+ W++ AK +MRER L ++ + Sbjct: 7 ELRQRLGVIQEYLDPESKTKRLAELDKIVGANDFWEDQNAAKAVMRERTDLAQSLEELDA 66 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D +LLELA+EEDD S+ E ++ ++ + LL G D A L + Sbjct: 67 LNRSMEDAEVLLELAVEEDDASLTAEIDQAHDALERQIGRLEAARLLGGPDDHRGAILAI 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGG ++QDWA ML R+Y R+AE++ F+ L+ G+EAG+KS T+ I GP AYG L Sbjct: 127 NAGAGGADAQDWAQMLTRLYGRYAERQGFQVVELDFQAGDEAGVKSVTMEINGPRAYGLL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D++ RRHT+F+S++V P VDD IEIE+ ++D RIDTYRASGAGGQ Sbjct: 187 KGESGVHRLVRISPFDASHRRHTAFASVYVSPQVDDDIEIEVKDADIRIDTYRASGAGGQ 246 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVRITH PTGVVVQCQ E+SQH+NK A +LRA+LYELE+ KRE + Sbjct: 247 HVNKTSSAVRITHFPTGVVVQCQNEKSQHRNKDMAMKVLRARLYELEIHKREAEKREVHA 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 S EI WG QIRSYVL PY++VKD RT +E + VLDG LDDF++ L Sbjct: 307 SHQEIAWGSQIRSYVLAPYRLVKDHRTGVEVGNVDSVLDGQLDDFIQGYL 356 >gi|222150753|ref|YP_002559906.1| peptide chain release factor RF-2 [Macrococcus caseolyticus JCSC5402] gi|222119875|dbj|BAH17210.1| peptide chain release factor RF-2 [Macrococcus caseolyticus JCSC5402] Length = 350 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 181/347 (52%), Positives = 237/347 (68%), Gaps = 3/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + LGGLFD + + DP W + +A+ ++ + L + + +++ L Sbjct: 1 MTVLGGLFDLEEKETNIKEYEEMMADPDFWNDGDKAQDIINKNNALKSVVQEFSTLEEGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 ++ +L E+ EE D QE + L ++ + + LLSGE D+N+A LE+H GAG Sbjct: 61 ENSEVLFEMYKEESDEDTHQELIEQLNTLQQIANDFELKMLLSGEFDANNAILELHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDW MLLRMY R+A+K+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+G Sbjct: 121 GTESQDWGEMLLRMYQRFADKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNT 245 VHRLVRISP+DS+ RRHTSF S V P D D+IEIEI+ D +IDTYRASGAGGQHVNT Sbjct: 181 VHRLVRISPFDSSGRRHTSFVSCEVTPEFDNDNIEIEINSEDIKIDTYRASGAGGQHVNT 240 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKT 304 TDSAVRITH PTG+VV CQ ERSQ KN+ QA ML+AKLY+ +++++E E+A I + Sbjct: 241 TDSAVRITHQPTGIVVTCQNERSQIKNREQAMKMLKAKLYQKKIEEQEAELAAI-RGEQK 299 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EIGWG QIRSYV PY MVKD RTN+E + + V+DGD+D F+ A L Sbjct: 300 EIGWGSQIRSYVFHPYSMVKDHRTNVETGNTNAVMDGDIDLFIDAYL 346 >gi|224419024|ref|ZP_03657030.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|253827969|ref|ZP_04870854.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|313142536|ref|ZP_07804729.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|253511375|gb|EES90034.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|313131567|gb|EFR49184.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] Length = 363 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 176/331 (53%), Positives = 230/331 (69%), Gaps = 6/331 (1%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R+ + + + W++ +A +E++ + KE L D L EL+ DD Sbjct: 32 RIEEIESLEQQKEFWEDSKKAGEYQKEKKRCLRQLEKYKEASLALSDAKELFELS--SDD 89 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 L E + ++ +++ + E +LSGE DSN+A + GAGGTESQDWA+ML RMY Sbjct: 90 EETLNELFNEAPMLEEQIKKAEIEVMLSGELDSNNAIFTITPGAGGTESQDWASMLYRMY 149 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RWAE+ FK E L+ +G+EAGIK A+ +IKG NAYG+ K E G+HRLVRISP+DSN++ Sbjct: 150 LRWAERCGFKVELLDYQEGDEAGIKDASFIIKGENAYGYTKVENGIHRLVRISPFDSNAK 209 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF+S+ V P +DD+I IEI E D RIDTYRASGAGGQH+N T+SA+RITHIPTG+VV Sbjct: 210 RHTSFASVQVTPEIDDNISIEIEEKDLRIDTYRASGAGGQHINKTESAIRITHIPTGIVV 269 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPY 320 QCQ +RSQHKNKA A ML++KLYELE QKR E+IAN K+EIGWG QIRSYVL PY Sbjct: 270 QCQNDRSQHKNKATALKMLKSKLYELEQQKRNEQIAN---DDKSEIGWGHQIRSYVLAPY 326 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Q VKDLR+NI ++ +LDGD+D ++ L Sbjct: 327 QQVKDLRSNIAYSNVEAILDGDIDSILEGVL 357 >gi|320540119|ref|ZP_08039774.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson] gi|320029785|gb|EFW11809.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson] Length = 325 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 174/321 (54%), Positives = 229/321 (71%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P +W A+ L +ER L+ ++ I ++ D LLELA+E +D E Sbjct: 2 EQPDVWNEPERAQALGKERAALEAIVATIDQLAQGGEDVNGLLELAVEAEDEETFNEAVI 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L ++ +++E +F + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + F Sbjct: 62 ELDQLMVKLERLEFCRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 KTE +E DG+ A +KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS++ Sbjct: 122 KTEVIEESDGDVARLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 +YP VDD I++EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQH Sbjct: 182 IYPEVDDDIDMEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNK QA+ LRAKLY+ E+QK+ E +K++IGWG QIRSYVL + +KDLRTN+ Sbjct: 242 KNKDQAFKQLRAKLYDFEMQKKNADKQTMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTNV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDGDLD F++A+L Sbjct: 301 ETRNTQAVLDGDLDKFIEASL 321 >gi|255659162|ref|ZP_05404571.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544] gi|260848613|gb|EEX68620.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544] Length = 368 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 172/354 (48%), Positives = 244/354 (68%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L+ +G + ++++ L K +P W + +A+ + +E + ++ K Sbjct: 11 ELKTKLDQMGESLEVPAKEEKIAELEYKMGEPTFWDDAEKAQKINQELNDVKISVDKYKN 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L E+ +EE D S+ ++ L + +E Q E LLSG D+N+A L + Sbjct: 71 LVAKFEDAQTLWEMGMEEQDESMEEDVKSELAAVAEGLESLQLEVLLSGPYDANNAILTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSATL IKG NAYG+L Sbjct: 131 HAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLLPGDEAGVKSATLFIKGHNAYGFL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G+HRLVRISP+D+ +RRHTSF++ + P +DD++E+ I+ SD R+DTYRASGAGGQ Sbjct: 191 RSEKGIHRLVRISPFDAQARRHTSFAACDIMPEIDDNVEVNINMSDVRVDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGE 300 H+N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q MLRAKL+ELE++K+E E+A + E Sbjct: 251 HINKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCLKMLRAKLFELEMEKKEAELAKL-E 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD RTN+E + V+DGD+D F++A LA K Sbjct: 310 GDQQKIEWGSQIRSYVFQPYTMVKDHRTNVETGNVQAVMDGDIDMFIRAFLAAK 363 >gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense Az-Fu1] Length = 370 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 173/344 (50%), Positives = 237/344 (68%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 N L + + + + L+++ DP+ W + +A+ + +R +L + I +I ++ Sbjct: 18 NNLKDILKPEKLQEEIKVLDSQMADPNFWNDPKKAQEISSKRNYLGEKLEEILKIDKKVK 77 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D ++L E D S+ E + ++ E+E + SLLS E DS +A L + AG+GG Sbjct: 78 DLQDYIQLLEMEKDESLYTEVEKEINHLEKELERLEISSLLSDEMDSKNAILTLQAGSGG 137 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ DW ML+RMY RWAE + F+ E ++ + AGIKSAT++IKGP AYG+LKGEQGV Sbjct: 138 VEACDWTQMLMRMYLRWAEGKGFQVEIVDYQPDDVAGIKSATIIIKGPFAYGYLKGEQGV 197 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D+N RRHTSF+++ V P +D+ I++EI+E D RIDT+RASGAGGQHVN TD Sbjct: 198 HRLVRISPFDANKRRHTSFAAVSVIPEIDEEIKVEINEEDLRIDTFRASGAGGQHVNKTD 257 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LELQK++E E K +I Sbjct: 258 SAVRITHIPTGIVVACQSERSQLQNKLKALNMLKAKLYQLELQKQKEKQKELEGEKKDIT 317 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV QPYQMVKDLRT E + V+DGD+D F+++ L Sbjct: 318 WGNQIRSYVFQPYQMVKDLRTGYEVGNVEAVMDGDIDGFIESYL 361 >gi|71276052|ref|ZP_00652333.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon] gi|71899474|ref|ZP_00681632.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1] gi|170729664|ref|YP_001775097.1| peptide chain release factor 2 [Xylella fastidiosa M12] gi|71163135|gb|EAO12856.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon] gi|71730787|gb|EAO32860.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1] gi|167964457|gb|ACA11467.1| peptide chain release factor RF-2 [Xylella fastidiosa M12] Length = 338 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 170/326 (52%), Positives = 235/326 (72%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + + E P +W A+ L RER LD ++ I + + + + L+LA E D +L Sbjct: 1 MTRELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEML 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 Q +++ +L+VE +F+ + SG+ D +A++++ AGAGGTE+QDWA MLLRMY RWA Sbjct: 61 QAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E R +K E LE+ GE AGIKSAT ++G AYGWLK E GVHRLVR SP+DS++RRHTS Sbjct: 121 EGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ Sbjct: 181 FTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQT 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH N+ +A ML AKLYE E+QKR ++ E+SK++IGWG QIR+YVL + +KD Sbjct: 241 ERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVLDQSR-IKD 299 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT +E++ VLDGDLD+F++A+L Sbjct: 300 LRTGVERSDTQKVLDGDLDEFIEASL 325 >gi|15837713|ref|NP_298401.1| peptide chain release factor 2 [Xylella fastidiosa 9a5c] gi|9106068|gb|AAF83921.1|AE003947_1 peptide chain release factor 2 [Xylella fastidiosa 9a5c] Length = 338 Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 170/326 (52%), Positives = 235/326 (72%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + + E P +W A+ L RER LD ++ I + + + + L+LA E D +L Sbjct: 1 MTRELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEML 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 Q +++ +L+VE +F+ + SG+ D +A++++ AGAGGTE+QDWA MLLRMY RWA Sbjct: 61 QAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E R +K E LE+ GE AGIKSAT ++G AYGWLK E GVHRLVR SP+DS++RRHTS Sbjct: 121 EGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ Sbjct: 181 FTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQT 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH N+ +A ML AKLYE E+QKR ++ E+SK++IGWG QIR+YVL + +KD Sbjct: 241 ERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVLDQSR-IKD 299 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT +E++ VLDGDLD+F++A+L Sbjct: 300 LRTGVERSDTQKVLDGDLDEFIEASL 325 >gi|255066677|ref|ZP_05318532.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256] gi|255049005|gb|EET44469.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256] Length = 367 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 170/338 (50%), Positives = 238/338 (70%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 87 EMTVEENDEEGFAAVQEDVAELEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG QIR Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|163789840|ref|ZP_02184276.1| peptide chain release factor 2, programmed frameshift [Carnobacterium sp. AT7] gi|159874780|gb|EDP68848.1| peptide chain release factor 2, programmed frameshift [Carnobacterium sp. AT7] Length = 353 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 181/347 (52%), Positives = 243/347 (70%), Gaps = 2/347 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD +N + ++ N + +P W++ +A+ ++ E L + ++ D Sbjct: 2 VLGGLFDLENLERDIAEYNDRMTEPTFWEDAQKAQTVINEANELKEKYNQYNDLVTEKED 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +LLE+ EE+D + +E + + +++ + + LLS D N+A +E+H GAGGT Sbjct: 62 LELLLEMVKEENDEELAKELNSKISPFLDKLDQYELDLLLSDPYDKNNAIIELHPGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDW ++LLRMYTRWAEKR FK E L G+EAGIKS TLLIKG NAYG+LK E+GVH Sbjct: 122 ESQDWGSLLLRMYTRWAEKRGFKIETLNYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS RRHTSF SI V P +DDS++I+I+ D +IDTYRA+GAGGQH+NTTDS Sbjct: 182 RLVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKIDTYRATGAGGQHINTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIG 307 AVRITHIP+GVVV Q +RSQ KN+ QA +ML+AKLY+LE++++E E+A I + EIG Sbjct: 242 AVRITHIPSGVVVASQAQRSQLKNRDQAMSMLKAKLYQLEVEEQEKEMAAI-RGEQLEIG 300 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RTN E + + V+DG +D F++A L K Sbjct: 301 WGSQIRSYVFHPYSMVKDHRTNYETGNIAQVMDGGIDPFIQAYLRSK 347 >gi|121603978|ref|YP_981307.1| peptide chain release factor 2 [Polaromonas naphthalenivorans CJ2] gi|120592947|gb|ABM36386.1| bacterial peptide chain release factor 2 (bRF-2) [Polaromonas naphthalenivorans CJ2] Length = 347 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 166/341 (48%), Positives = 241/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ ++L+ +N EDP +W N A+ L RE++ L++ + + ++ L DN Sbjct: 4 GGIFDYPAKARKLNEVNAALEDPKVWDNPKRAQELGREKKSLEDVVLILDRLEQELSDNT 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E++ +++D + ++ ++ EVE +F + + AD + +L++ AGAGGTE+ Sbjct: 64 ELFEMSKDDNDEAGMRAIEGEAAKVAAEVEKMEFRRMFNNPADPLNCFLDIQAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++AE++ FKT + G+ AGIK AT+ I+G A+G L+ E GVHRL Sbjct: 124 CDWASMLLRQYLKYAERKGFKTTIEDESAGDTAGIKGATIKIEGEYAFGLLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP +DDSIEI+I+ +D R DTYRASGAGGQH+N TDSAV Sbjct: 184 VRKSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VVQCQ+ RSQH N+ AW LR++LY+ EL+K++E E +KT++GWG Sbjct: 244 RLTHIPTGIVVQCQEGRSQHGNRDVAWKRLRSRLYDFELRKQQEAQQKLEDTKTDVGWGH 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN E ++ VLDGDLD F++A+L Sbjct: 304 QIRSYVLDNSR-IKDLRTNYETSATQKVLDGDLDPFIEASL 343 >gi|308187994|ref|YP_003932125.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1] gi|308058504|gb|ADO10676.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1] Length = 351 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 179/342 (52%), Positives = 238/342 (69%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P +W A+ L +ER L+ + ++++ L D Sbjct: 7 FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVQTLEQMSQGLEDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E +D E L ++ ++ +F + SGE DS D Y+++ AG+GGTE Sbjct: 67 QGLLELAVEAEDEETFNEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ E GVHR Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 307 SQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 347 >gi|77918851|ref|YP_356666.1| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380] gi|77544934|gb|ABA88496.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter carbinolicus DSM 2380] Length = 326 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 174/319 (54%), Positives = 232/319 (72%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W++ +A+ +++ER L+ ++ +E Q L D +L +L E D + L+E S L Sbjct: 4 PGFWESGDQAQDILKERTGLEKLVTSFRESQQELEDLQLLADLGAESGDEATLEEISALL 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++ V+ +F +LSGE DS DA ++AGAGGTE+QDWA+MLLRMY R+ EK+ FK Sbjct: 64 PDLQRRVDKMEFARMLSGEHDSCDAIFSINAGAGGTEAQDWADMLLRMYMRYFEKKGFKA 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E + G+EAGIK ATL + G AYGWL+ E G+HRLVRISP+DSN+RRHTSF S++V+ Sbjct: 124 ELTDHQPGDEAGIKGATLTVSGDYAYGWLRAEIGIHRLVRISPFDSNARRHTSFCSVFVF 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P + D +E++I+E D ++DTYR+SGAGGQHVN TDSA+RITH+P+G+VV CQ ERSQHKN Sbjct: 184 PELPDDVEVDINEKDLKVDTYRSSGAGGQHVNKTDSAIRITHVPSGIVVACQNERSQHKN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 +A A L+A+LYELEL+K+EE A+ K EIGWG QIRSYVL PY+MVKD RTN E Sbjct: 244 RATAMKQLKARLYELELRKKEEEASAIAGEKMEIGWGSQIRSYVLHPYRMVKDHRTNFES 303 Query: 333 TSPSDVLDGDLDDFMKATL 351 + VLDGDLD F++A L Sbjct: 304 GNADAVLDGDLDGFIEAYL 322 >gi|254804065|ref|YP_003082286.1| peptide chain release factor 2 [Neisseria meningitidis alpha14] gi|254667607|emb|CBA03375.1| peptide chain release factor 2 [Neisseria meningitidis alpha14] gi|254673936|emb|CBA09720.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha275] gi|309379815|emb|CBX21591.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|325143543|gb|EGC65864.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013] gi|325207035|gb|ADZ02488.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196] Length = 367 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27] gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44] gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44] gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27] Length = 330 Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 166/320 (51%), Positives = 231/320 (72%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W N +A+ + +E L NA+ K++ + D ++LE+A++EDD S+ E + Sbjct: 3 DPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIKEY 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +++I+ +E ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK F Sbjct: 63 VKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSGFS 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ V Sbjct: 123 IELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ + Sbjct: 183 MPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY +VKD RT++E Sbjct: 243 NREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTSVE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG+LD F++ L Sbjct: 303 TGNVQAVMDGNLDPFIEGFL 322 >gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745] gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745] Length = 330 Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 166/320 (51%), Positives = 231/320 (72%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W N +A+ + +E L NA+ K++ + D ++LE+A++EDD S+ E + Sbjct: 3 DPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIKEY 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +++I+ +E ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK F Sbjct: 63 VKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSGFS 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ V Sbjct: 123 IELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ + Sbjct: 183 MPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY +VKD RT++E Sbjct: 243 NREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTSVE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG+LD F++ L Sbjct: 303 TGNVQAVMDGNLDPFVEGFL 322 >gi|121635783|ref|YP_976028.1| peptide chain release factor 2 [Neisseria meningitidis FAM18] gi|261378556|ref|ZP_05983129.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685] gi|304388773|ref|ZP_07370830.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC 13091] gi|166225113|sp|A1KWK6|RF2_NEIMF RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|120867489|emb|CAM11266.1| peptide chain release factor 2 [Neisseria meningitidis FAM18] gi|254671300|emb|CBA08663.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha153] gi|261393453|emb|CAX51098.1| peptide chain release factor II (RF-2) [Neisseria meningitidis 8013] gi|269145108|gb|EEZ71526.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685] gi|304337265|gb|EFM03442.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC 13091] gi|308390220|gb|ADO32540.1| peptide chain release factor 2 [Neisseria meningitidis alpha710] gi|325131224|gb|EGC53936.1| peptide chain release factor 2 [Neisseria meningitidis M6190] Length = 367 Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|119476451|ref|ZP_01616802.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2143] gi|119450315|gb|EAW31550.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2143] Length = 364 Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 176/344 (51%), Positives = 245/344 (71%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D ++L+ + + +P +W + A+ L ++R LD +S I ++ + D Sbjct: 20 FGGIFDYDIRKEQLTEVELELGEPAVWDDPGRAQELGKQRAALDIVVSTIDKLTVGVSDV 79 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLE+A+EEDD + E + LQ + + +F + SGE D+N+A+LE+ +G+GGTE Sbjct: 80 AELLEMAVEEDDADTVMEIENELQLLNQHLATLEFRRMFSGEMDANNAFLEIQSGSGGTE 139 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA M+ RMY RW E + F TE +E DG+ AGIKSAT+ G A+GWL+ E GVHR Sbjct: 140 AQDWAEMICRMYLRWGESKGFSTELMEASDGDVAGIKSATIRFSGEYAFGWLRTETGVHR 199 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS SRRHTSF+S++V P +D+ I+IEI+ SD R DTYRASGAGGQHVN TDSA Sbjct: 200 LVRKSPFDSGSRRHTSFASVFVSPEIDEDIDIEINPSDLRTDTYRASGAGGQHVNKTDSA 259 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH P+G+VVQCQ +RSQH+N+ A L+AKLYE+E+ KR E A E +K +IGWG Sbjct: 260 VRITHEPSGIVVQCQSQRSQHQNRDFAMKQLKAKLYEMEMLKRNEAAQAQEDNKADIGWG 319 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL Q +KDLRT+++ ++ ++VLDGDLD F++A+L + Sbjct: 320 SQIRSYVLDD-QRIKDLRTHVQTSNCNNVLDGDLDLFIEASLKM 362 >gi|161871001|ref|YP_001600181.1| peptide chain release factor 2 [Neisseria meningitidis 053442] gi|161596554|gb|ABX74214.1| peptide chain release factor 2 [Neisseria meningitidis 053442] Length = 352 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 12 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 71 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 72 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 129 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 189 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 249 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 308 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 309 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 348 >gi|313669297|ref|YP_004049581.1| peptide chain release factor 2 [Neisseria lactamica ST-640] gi|313006759|emb|CBN88229.1| peptide chain release factor 2 [Neisseria lactamica 020-06] Length = 367 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVVGLSEDPELWNDQKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|325135363|gb|EGC57984.1| peptide chain release factor 2 [Neisseria meningitidis M0579] gi|325208983|gb|ADZ04435.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33] Length = 367 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|262370876|ref|ZP_06064200.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046] gi|262314238|gb|EEY95281.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046] Length = 310 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 168/307 (54%), Positives = 222/307 (72%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N ++ + + +L D +L+LA+E DD S+L + L + E+ +F Sbjct: 1 MAKEKGELENVLNVLDGLATQLEDAQAMLDLAVEADDESLLADVQAELTSAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+ KR E A E SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 KFIEASL 306 >gi|20807024|ref|NP_622195.1| protein chain release factor B [Thermoanaerobacter tengcongensis MB4] gi|20515510|gb|AAM23799.1| Protein chain release factor B [Thermoanaerobacter tengcongensis MB4] Length = 347 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 175/342 (51%), Positives = 235/342 (68%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + + + + + DP W ++ +++ L ++++ L + + + R D L Sbjct: 3 LFDVEGIKKEIEDIEKQMSDPSFWSDLKKSQELSKKQKALKELLEEYESLLSRCEDLYTL 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +EL LEE D SI +E + +K EVE + +LLSG D N+A L +HAG+GGTE+QD Sbjct: 63 IELGLEEGDESIAEEVEREYKELKKEVENLKIRTLLSGPYDKNNAILSIHAGSGGTEAQD 122 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRWA + F+ E L+ +GEEAGIKSATLLIKGP AYG+LKGE GVHRLVR Sbjct: 123 WAEMLLRMYTRWANDKGFEVEILDYLEGEEAGIKSATLLIKGPFAYGYLKGEAGVHRLVR 182 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ RRHTSF+ + V P ++D IEIEI D +IDT+RASGAGGQHVN T+SAVRI Sbjct: 183 ISPFDAAGRRHTSFALVEVIPELEDDIEIEIRPEDLKIDTFRASGAGGQHVNKTESAVRI 242 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++R+E + E WG QI Sbjct: 243 THLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKERKEKIEDLKGEHREAAWGNQI 302 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RSYV QPY +VKD RTN E+ + + V+DG++D F+ A L K Sbjct: 303 RSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGFINAYLKQK 344 >gi|218767251|ref|YP_002341763.1| peptide chain release factor 2 [Neisseria meningitidis Z2491] gi|24638158|sp|Q9JWV4|RF2_NEIMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|121051259|emb|CAM07534.1| peptide chain release factor 2 [Neisseria meningitidis Z2491] gi|319411456|emb|CBY91871.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE 2594] Length = 367 Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|325129251|gb|EGC52090.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304] gi|325133309|gb|EGC55975.1| peptide chain release factor 2 [Neisseria meningitidis M13399] gi|325205086|gb|ADZ00540.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355] Length = 341 Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 1 MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 61 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 117 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 118 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 177 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 178 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 237 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 238 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 297 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 298 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 337 >gi|291618681|ref|YP_003521423.1| PrfB [Pantoea ananatis LMG 20103] gi|291153711|gb|ADD78295.1| PrfB [Pantoea ananatis LMG 20103] Length = 430 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 178/342 (52%), Positives = 237/342 (69%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P +W A+ L +ER L+ + ++ L D Sbjct: 86 FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTFDQMSQGLEDV 145 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL+LA+E DD E L ++ ++ +F + SGE DS D Y+++ AG+GGTE Sbjct: 146 QGLLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 205 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ E GVHR Sbjct: 206 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 265 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 266 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 325 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E +K++IGWG Sbjct: 326 VRITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNKSDIGWG 385 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 386 SQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 426 >gi|119776010|ref|YP_928750.1| peptide chain release factor 2 [Shewanella amazonensis SB2B] gi|119768510|gb|ABM01081.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella amazonensis SB2B] Length = 364 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 181/345 (52%), Positives = 236/345 (68%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L LGG+FD+D +RL + + E +W N A+ L +ER L+N + I + L Sbjct: 17 LCSLGGIFDYDAKKERLEEVTRELESSDVWNNPERAQALGKERASLENVVKTIDTLDSGL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EE+D ++ L ++ +E +F + SG D +D YL++ +G+G Sbjct: 77 EDVEGLLELAVEEEDEGTFEDAKAELDELEKSLEDLEFRRMFSGPQDPSDCYLDIQSGSG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA M+LRMY RW E FK E +E+ DG+ AGIKSAT+ G AYGWL+ E G Sbjct: 137 GTEAQDWAEMVLRMYLRWGEAHDFKPELIEVSDGDVAGIKSATIKFTGEYAYGWLRTETG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ +D RID YRASGAGGQHVN T Sbjct: 197 VHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPADLRIDVYRASGAGGQHVNRT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT VVQCQ +RSQHKNK A L+AKLYELELQK+ E +K++I Sbjct: 257 ESAVRITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLYELELQKQNAEKQAAEDAKSDI 316 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 317 GWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 360 >gi|297171663|gb|ADI22657.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF0500_22O06] Length = 356 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 181/344 (52%), Positives = 236/344 (68%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG FD ++ +RL L+ + P W + +AK + E L + + R+ Sbjct: 4 KSLGGTFDLESRQERLRVLDQEMVQPGFWDSPDQAKATIDESNRLKGWVDPWSSLDARVS 63 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + L+EL EE+D + E + L ++ ++E + ++L G D DA + +H GAGG Sbjct: 64 ELTALVELLEEEEDADLEAEFTRGLASVEKDLEVLEVRTMLQGGDDHRDALVTIHPGAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ESQDWA ML+RMYTRW+E+R F E L++ EE GIKSATL IKG AYG+LK E GV Sbjct: 124 LESQDWAGMLMRMYTRWSERRGFGVEVLDLQSAEEGGIKSATLEIKGECAYGYLKAEGGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D SRRHTSF+S+++YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TD Sbjct: 184 HRLVRISPFDQQSRRHTSFASVFIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTD 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH PTG+V CQQERSQHKN++ A MLRA LY+ LQ++E + E++KTEIG Sbjct: 244 SAVRITHEPTGIVTTCQQERSQHKNRSTAMKMLRAALYQHALQEQERERAVLEATKTEIG 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G QIRSYV QPY MV D RT ++ T+ V+DGDLD F++A L Sbjct: 304 FGNQIRSYVFQPYTMVNDHRTELKITNVQGVMDGDLDPFIEAYL 347 >gi|325127235|gb|EGC50173.1| peptide chain release factor 2 [Neisseria meningitidis N1568] gi|325137398|gb|EGC59986.1| peptide chain release factor 2 [Neisseria meningitidis ES14902] gi|325141306|gb|EGC63796.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945] gi|325199214|gb|ADY94670.1| peptide chain release factor 2 [Neisseria meningitidis G2136] gi|325203114|gb|ADY98568.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149] Length = 341 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 174/341 (51%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 1 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 61 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 117 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 118 EDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 177 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 178 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 237 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 238 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 297 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 298 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 337 >gi|261401531|ref|ZP_05987656.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970] gi|269208367|gb|EEZ74822.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970] Length = 367 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 170/338 (50%), Positives = 238/338 (70%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 87 EMTVEENDEEGFAAVKEDVVGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG QIR Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|239816762|ref|YP_002945672.1| hypothetical protein Vapar_3791 [Variovorax paradoxus S110] gi|259585247|sp|C5CUX0|RF2_VARPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|239803339|gb|ACS20406.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 367 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 170/349 (48%), Positives = 245/349 (70%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L D+D +RL +N EDP++W + +A+ L RE++ LD+ + + + Sbjct: 16 LSARTADLRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN L E++ E+ D LQ +D+ ++ +++ +F + + AD +A++++ Sbjct: 76 TSGLSDNTELYEMSKEDGDMDGLQSIADDAAALETDIKQLEFRRMFNNPADPLNAFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++AE++ FKT+ + G+ AGIK AT+ ++G A+G L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+SI+VYP +DDSIEIEI+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIEINPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E E S Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363 >gi|124267958|ref|YP_001021962.1| peptide chain release factor 2 [Methylibium petroleiphilum PM1] gi|124260733|gb|ABM95727.1| bacterial peptide chain release factor 2 (bRF-2) [Methylibium petroleiphilum PM1] Length = 355 Score = 349 bits (895), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 170/341 (49%), Positives = 239/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RLS +N EDP +W + A+ L RE++ L+ + I ++ L DN Sbjct: 12 GGIFDYDEKSRRLSEVNAALEDPTVWNDPKNAQALGREKKSLETVVDTIASLERNLADNA 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E++ EE D L+ + +VE +F + S AD ++ ++++ AGAGGTE+ Sbjct: 72 ELYEMSKEEGDEDGLRAIEAETLGLAAQVEQLEFRRMFSNPADPSNCFIDIQAGAGGTEA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++ E++ FK + +G+ AGIKSAT+ ++G A+G L+ E GVHRL Sbjct: 132 CDWASMLLRQYLKYCERKGFKATIEDETEGDTAGIKSATIKVEGDYAFGHLRTETGVHRL 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP VDDSIEIEI+ +D R DT+RASGAGGQH+N TDSAV Sbjct: 192 VRKSPFDSSGGRHTSFASLFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAV 251 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E E +KT++GWG Sbjct: 252 RLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDTKTDVGWGH 311 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 312 QIRSYVLDNSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 351 >gi|323143525|ref|ZP_08078205.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066] gi|322416719|gb|EFY07373.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066] Length = 347 Score = 348 bits (894), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 171/342 (50%), Positives = 236/342 (69%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD++ +RL +N EDP +W + +A+ L +ERQ L + +S ++ D Sbjct: 3 LGGIFDFETKKERLEEVNGLLEDPQVWNDPEKAQQLGKERQVLSSVVSRFDKLYSGFDDV 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+L EL EE D ++E +++ + +FE + S D++D Y+++ +G+GGTE Sbjct: 63 LMLFELGSEEGDEDSIKEAYSEADKLEEVLNALEFERMFSKPNDNSDCYMDIQSGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA M++RMY ++ EK F +E +GE AGIKSATL GP A+GWL+ E G+HR Sbjct: 123 AQDWAEMVMRMYLKFGEKHGFDCTVIECSEGEVAGIKSATLKFAGPYAFGWLRTETGIHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+RRHTSF S +VYP +D+ I++EI+ +D +ID +R+SGAGGQHVN T+SA Sbjct: 183 LVRKSPFDSNNRRHTSFCSAFVYPEIDNDIKVEINPADLKIDVFRSSGAGGQHVNKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTGVVV CQ ERSQ +N+ QA LRAKLYELEL+K++ E SK +IGWG Sbjct: 243 VRITHIPTGVVVSCQNERSQFQNRDQAMKQLRAKLYELELRKQQSEQQAIEDSKADIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + VKDLRT +E VL+GDLD F++A+L Sbjct: 303 SQIRSYVLDDAR-VKDLRTQVECRDTQRVLNGDLDQFIEASL 343 >gi|319957316|ref|YP_004168579.1| bacterial peptide chain release factor 2 (brf-2) [Nitratifractor salsuginis DSM 16511] gi|319419720|gb|ADV46830.1| bacterial peptide chain release factor 2 (bRF-2) [Nitratifractor salsuginis DSM 16511] Length = 372 Score = 348 bits (894), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 171/349 (48%), Positives = 233/349 (66%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS ++ + + + +RL + ++P W + A + +E+ L+ ++ E Sbjct: 13 LSTKMENITNIVKPEEIRKRLDEIEEMQQNPEFWTDSDRAAKISQEKTRLERTLAKYDEA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D ELA E D L+ D + +K ++ + +LSGE DS +A + +H Sbjct: 73 KAALEDAQEYFELAKSEGDEETLEMLYDEAENLKEHIQQLEVAIMLSGEHDSANAIVTIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RWAE+ FK E L+ GEEAGIK + +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+D+N++RHTSF+S+ V P ++D I+IEI + D RIDTYRASGAGGQH Sbjct: 193 VENGIHRLVRISPFDANAKRHTSFTSVMVSPEINDDIDIEIEDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A ML+++LYE E+ K++ A I Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKAAAMKMLKSRLYEYEMAKKQ--AEIDGIE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVLQPYQ VKD R+ T+ +LDGD+D ++ L Sbjct: 311 KSDIGWGHQIRSYVLQPYQQVKDTRSGQAFTNVEAILDGDIDKLLEGVL 359 >gi|15677951|ref|NP_275123.1| peptide chain release factor 2 [Neisseria meningitidis MC58] gi|24638159|sp|Q9JXB3|RF2_NEIMB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|7227395|gb|AAF42446.1| peptide chain release factor 2 [Neisseria meningitidis MC58] gi|316984027|gb|EFV63006.1| peptide chain release factor 2 [Neisseria meningitidis H44/76] gi|325139451|gb|EGC61991.1| peptide chain release factor 2 [Neisseria meningitidis CU385] Length = 367 Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 173/341 (50%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ F+ E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|59802262|ref|YP_208974.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090] gi|194099790|ref|YP_002002925.1| peptide chain release factor 2 [Neisseria gonorrhoeae NCCP11945] gi|239999963|ref|ZP_04719887.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02] gi|240013088|ref|ZP_04720001.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI18] gi|240017657|ref|ZP_04724197.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA6140] gi|240081863|ref|ZP_04726406.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19] gi|240114140|ref|ZP_04728630.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11] gi|240116780|ref|ZP_04730842.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18] gi|240119007|ref|ZP_04733069.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1] gi|240122278|ref|ZP_04735240.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID24-1] gi|240122455|ref|ZP_04735411.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332] gi|240126695|ref|ZP_04739581.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679] gi|240127168|ref|ZP_04739829.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035] gi|254493466|ref|ZP_05106637.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291] gi|260441572|ref|ZP_05795388.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2] gi|268595771|ref|ZP_06129938.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02] gi|268597961|ref|ZP_06132128.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19] gi|268600216|ref|ZP_06134383.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11] gi|268602456|ref|ZP_06136623.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18] gi|268604723|ref|ZP_06138890.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1] gi|268681042|ref|ZP_06147904.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332] gi|268685277|ref|ZP_06152139.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679] gi|268685523|ref|ZP_06152385.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035] gi|291044943|ref|ZP_06570652.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2] gi|293398016|ref|ZP_06642222.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62] gi|75432344|sp|Q5F5H5|RF2_NEIG1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|238693228|sp|B4RQU4|RF2_NEIG2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|59719157|gb|AAW90562.1| putative peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090] gi|193935080|gb|ACF30904.1| PrfB [Neisseria gonorrhoeae NCCP11945] gi|226512506|gb|EEH61851.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291] gi|268549160|gb|EEZ44578.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02] gi|268551749|gb|EEZ46768.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19] gi|268584347|gb|EEZ49023.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11] gi|268586587|gb|EEZ51263.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18] gi|268588854|gb|EEZ53530.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1] gi|268621326|gb|EEZ53726.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332] gi|268625561|gb|EEZ57961.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679] gi|268625807|gb|EEZ58207.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035] gi|291011837|gb|EFE03833.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2] gi|291611962|gb|EFF41031.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62] gi|317165260|gb|ADV08801.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107] Length = 367 Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 170/338 (50%), Positives = 238/338 (70%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +E + L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKESKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+A+EE+D +++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 87 EMAVEENDEEGFAAVKEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 147 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG QIR Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|190149600|ref|YP_001968125.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307245141|ref|ZP_07527233.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249543|ref|ZP_07531530.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255961|ref|ZP_07537758.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258552|ref|ZP_07540288.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260795|ref|ZP_07542482.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262921|ref|ZP_07544544.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914731|gb|ACE60983.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306853921|gb|EFM86134.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306858398|gb|EFM90467.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861075|gb|EFM93072.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867346|gb|EFM99198.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869521|gb|EFN01311.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871739|gb|EFN03460.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 347 Score = 348 bits (893), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 174/342 (50%), Positives = 241/342 (70%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ I+ + + D Sbjct: 3 FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+E +D E ++ ++ +F+ + SG+ D+ D Y+++ AG+GGTE Sbjct: 63 EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+HR Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+G+VVQCQ RSQH+NK Q L+AKLYE+E+ K+ E SK++IGWG Sbjct: 243 VRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 303 SQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 343 >gi|302385044|ref|YP_003820866.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1] gi|302195672|gb|ADL03243.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1] Length = 377 Score = 348 bits (893), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 171/338 (50%), Positives = 236/338 (69%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D DN ++R+ L+ E+P W++ ++ +++ ++L + + +E++ + D +++ Sbjct: 25 LDLDNKLKRIDELDKSMEEPGFWEDPEKSAKIVQLAKNLKDTVQSYQELERQYEDIGVMI 84 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ EE+D S++ E + L+ K +E + +LLSGE DS++A L ++AGAGGTES DW Sbjct: 85 EMGNEENDPSLVPEVEEMLREFKESLESMRINTLLSGEYDSDNAILRLNAGAGGTESCDW 144 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ML RM+ RWAEK+ F E L+ DGEEAGIKS T+ I GPNAYG+LK E+GVHRLVRI Sbjct: 145 CGMLYRMFCRWAEKKGFSLEVLDYLDGEEAGIKSVTVQINGPNAYGYLKSEKGVHRLVRI 204 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+++ +R TSF S V P +++ +++EI+E D RIDTYR+SGAGGQH+N T SA+RIT Sbjct: 205 SPFNAAGKRQTSFVSCDVMPDIEEDLDVEINEEDLRIDTYRSSGAGGQHINKTSSAIRIT 264 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+PTG+VVQCQ ERSQ +NK +A ML+AKLY L+ Q+ E + TEIGWG QIR Sbjct: 265 HLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYMLKQQENAEKLSGIRGDVTEIGWGNQIR 324 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVLQPY MVKD RTN E + VLDG LD FM A L Sbjct: 325 SYVLQPYTMVKDHRTNAETGNVGSVLDGSLDQFMYAYL 362 >gi|83644616|ref|YP_433051.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396] gi|83632659|gb|ABC28626.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396] Length = 301 Score = 348 bits (893), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 168/296 (56%), Positives = 222/296 (75%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ L D LL++A+EE D + E L+ I+ +VE +F + +GE D N Sbjct: 3 VKTVDDVTGGLTDCSDLLDMAVEEQDADAVTEVETELESIRAQVETLEFRRMFAGEMDPN 62 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +AYL++ AG+GGTE+QDWA++LLRMY RW E+R FKT+ +E GE AGIKSAT+ +G Sbjct: 63 NAYLDIQAGSGGTEAQDWASILLRMYLRWGERRGFKTDLIEESPGEVAGIKSATIHFQGE 122 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYGWL+ E GVHRLVR SP+DS +RRHTSF+S++V P VDD IEI+I+ +D RID YRA Sbjct: 123 YAYGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEVDDDIEIDINPADLRIDVYRA 182 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITH+P+G+V QCQ +RSQHKNK QA L+AKLYELE+QKR Sbjct: 183 SGAGGQHVNRTESAVRITHMPSGIVTQCQNDRSQHKNKDQAMKQLKAKLYELEIQKRNAE 242 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 A E SK++IGWG QIRSYVL + +KDLRT+IE ++ VLDGD+D+F++A+L Sbjct: 243 AQQLEDSKSDIGWGSQIRSYVLDQSR-IKDLRTSIENSNCQAVLDGDIDEFIEASL 297 >gi|285018127|ref|YP_003375838.1| peptide chain release factor 2 protein [Xanthomonas albilineans GPE PC73] gi|283473345|emb|CBA15850.1| probable peptide chain release factor 2 protein [Xanthomonas albilineans] Length = 373 Score = 348 bits (893), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 179/341 (52%), Positives = 247/341 (72%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG FD+D +RL + + E P +W + A+ L RER +L+ + I + + L ++L Sbjct: 21 GGFFDYDAKKERLEEVARELESPDVWNDPERAQGLGRERANLEKTVGGIASVLEGLNESL 80 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA E+D Q ++ R + +VE +F+ + SG+ DS +A++++ AGAGGTE+ Sbjct: 81 ELLELAESENDEDTAQGVIADVDRFQTQVEKLEFQRMFSGQMDSCNAFVDIQAGAGGTEA 140 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA +LLRMY RW E R +KTE +E+ GE AGIKSATL ++G AYGWLK E GVHRL Sbjct: 141 QDWAEILLRMYLRWCESRGWKTELMEVSGGEVAGIKSATLRVEGDFAYGWLKTETGVHRL 200 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS++RRHTSF+S++V P VDD+I+I+I+ +D + D YR+SGAGGQHVN T+SAV Sbjct: 201 VRKSPFDSDNRRHTSFTSVFVSPEVDDNIDIDINPADLKTDVYRSSGAGGQHVNKTESAV 260 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTG+VV CQ RSQH+N+ A ML AKLYELE+QKR + E++K++IGWG Sbjct: 261 RITHVPTGIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAERDAVEATKSDIGWGS 320 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YVL + +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 321 QIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 360 >gi|325201177|gb|ADY96632.1| peptide chain release factor 2 [Neisseria meningitidis H44/76] Length = 341 Score = 348 bits (893), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 173/341 (50%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 1 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 61 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 117 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ F+ E LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 118 EDWAGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRL 177 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 178 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 237 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 238 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 297 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 298 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 337 >gi|312796706|ref|YP_004029628.1| peptide Chain Release Factor 2 (RF-2) [Burkholderia rhizoxinica HKI 454] gi|312168481|emb|CBW75484.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Burkholderia rhizoxinica HKI 454] Length = 320 Score = 348 bits (892), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 166/317 (52%), Positives = 233/317 (73%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W + +A+ L RE++ LD + + + L D L ELA EE D L ++Q Sbjct: 1 MWSDSKQAQALGREKKLLDAVVQMLSALNGDLTDTQELFELASEEQDDDTLLACERDVQA 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ V +F + + AD N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ FK E Sbjct: 61 LERRVADIEFRRMFNNPADPNNCFVDIQAGAGGTEAQDWASMLLRQYLRYCERKGFKAEV 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE DGE AGIK+AT+ ++G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP Sbjct: 121 LEQSDGEVAGIKNATIKVEGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VD+SI+I+++ +D RIDT+RASGAGGQH+N TDSAVRITH+P+G+VVQCQ +RSQH+N+A Sbjct: 181 VDESIDIDVNPADLRIDTFRASGAGGQHINKTDSAVRITHLPSGIVVQCQNDRSQHRNRA 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 +A ML+++LYE E++KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ Sbjct: 241 EAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEISN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLDDF+ A+L Sbjct: 300 TRAVLDGDLDDFISASL 316 >gi|37527422|ref|NP_930766.1| peptide chain release factor 2 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786857|emb|CAE15922.1| Peptide chain release factor 2 (RF-2) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 310 Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 173/307 (56%), Positives = 222/307 (72%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ + I +++ L D LLELA+E DD E L++++ ++ +F Sbjct: 1 MGKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFNEAVVELEQLEEKLGQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DGE AG Sbjct: 61 RRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ Sbjct: 121 LKSATIKIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD Sbjct: 241 YELEMQKKNANKQEMEENKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 KFIEASL 306 >gi|241662572|ref|YP_002980932.1| hypothetical protein Rpic12D_0960 [Ralstonia pickettii 12D] gi|240864599|gb|ACS62260.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 367 Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 171/338 (50%), Positives = 245/338 (72%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +RL ++ + E+P +W + A+ L RE++ L+ + + ++ + L L Sbjct: 27 LDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKLDEDLTGAAELF 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA EE D ++ + ++ VE +F + SG D+ + ++++ AGAGGTE+ DW Sbjct: 87 ELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEACDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLR Y ++ E++ FKTE LE +G+ AGIKSA++ ++G A+G+L+ E GVHRLVR Sbjct: 147 ASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS RHTSFSSI+VYP VDDSIEIEI+ +D R+DTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSAGGRHTSFSSIFVYPEVDDSIEIEINPADLRVDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E++KT++GWG QIR Sbjct: 267 HIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAAKTDVGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 327 SYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363 >gi|225872704|ref|YP_002754161.1| peptide chain release factor 2, programmed frameshift [Acidobacterium capsulatum ATCC 51196] gi|225792505|gb|ACO32595.1| peptide chain release factor 2, programmed frameshift [Acidobacterium capsulatum ATCC 51196] Length = 384 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 176/338 (52%), Positives = 230/338 (68%), Gaps = 5/338 (1%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---- 78 L+ + TK DP LW N ++ LMR+R+ ++ +++ E+ R D ELA E Sbjct: 32 LAAIETKLADPALWSNPQLSQPLMRDRKRIEEQLAYDTELARRSGDIDAYFELARESEAA 91 Query: 79 -EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 E D ++ + S + + VE + ++LSGE D+ +A + VH GAGGTESQDWA ML Sbjct: 92 GEADANLEADLSREISALGEYVEKLESRTMLSGETDALNAIVTVHPGAGGTESQDWAEML 151 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +RMY RWAE++ FKTE + DGEEAGIKSAT I G A+G L GE GVHRLVRISP+D Sbjct: 152 MRMYLRWAEQQGFKTEMNDYQDGEEAGIKSATFTIIGDYAFGQLSGETGVHRLVRISPFD 211 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 RRHTSF+S++V P +DDSI+I+I + R DTYR+ G GGQHVNTTDSAVRITHIPT Sbjct: 212 QAKRRHTSFASVFVSPEIDDSIQIDIKPDELRTDTYRSGGKGGQHVNTTDSAVRITHIPT 271 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ ERSQHKN+ +A MLR++LYE EL K++ E SK +I +G QIRSYVL Sbjct: 272 GIVVQCQNERSQHKNREKAMKMLRSRLYEYELAKKQAETKKLEDSKLDINFGSQIRSYVL 331 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QPY++ KD RT +E VLDG LD F++ L +++ Sbjct: 332 QPYRIAKDHRTKVEVGDVDRVLDGYLDPFIRGYLTMRR 369 >gi|299137096|ref|ZP_07030279.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8] gi|298601611|gb|EFI57766.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8] Length = 375 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 173/351 (49%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 R+ G +FD + L+ + K DP +W + +++ LMRER+ L++ ++ E+ Sbjct: 12 RKYATCGSIFDSPRLKKELAVIEEKIADPAVWADAAKSQPLMRERKRLESQLADDAELAR 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 R D +L + E + S+ + + + E + ++LS E D+ +A + VH G Sbjct: 72 RGEDIDAYFDL-MREGEASVEPDLKREIDSLVAFSEALESRTMLSEENDTLNAIVTVHPG 130 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTESQDWA ML+RMY RWAE++ FKTE E+ DG+EAGIKSAT I G A+G + GE Sbjct: 131 AGGTESQDWAEMLMRMYLRWAERQGFKTEINELQDGDEAGIKSATFTITGDFAFGLIAGE 190 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVRISP+D RRHTSF+S++V P +DDSI I+I D RIDTYR+ G GGQHVN Sbjct: 191 TGVHRLVRISPFDQAKRRHTSFASVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHVN 250 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+V CQ ERSQHKNK +A MLR++LYE EL K++ ++ E SK Sbjct: 251 TTDSAVRITHLPTGIVAGCQNERSQHKNKEKAMKMLRSRLYEYELDKKKAVSRKLEDSKL 310 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 EI +G QIRSYVLQPY++ KDLRT +E VLDG+L+ F++ L +++ Sbjct: 311 EINFGSQIRSYVLQPYRIAKDLRTRVEVGDVDRVLDGELEPFIRGYLKMRR 361 >gi|298370446|ref|ZP_06981762.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str. F0314] gi|298281906|gb|EFI23395.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str. F0314] Length = 367 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 173/341 (50%), Positives = 241/341 (70%), Gaps = 7/341 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 86 Query: 74 ELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +EE+D + +QE L++ ++E+K+ + + AD N+ ++++ AGAGGTE+ Sbjct: 87 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKR---MFNQPADPNNCFIDITAGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +DWA ML RMY+R+AE++ FK + LE DGE AGI AT+ ++G AYG L+ E GVHRL Sbjct: 144 EDWAGMLFRMYSRYAERKGFKIDILEEDDGEIAGINRATIRLEGEYAYGLLRTETGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 204 VRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 263 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG Sbjct: 264 RITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGS 323 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 324 QIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|160898706|ref|YP_001564288.1| peptide chain release factor 2 [Delftia acidovorans SPH-1] gi|160364290|gb|ABX35903.1| peptide chain release factor 2 [Delftia acidovorans SPH-1] Length = 386 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 172/341 (50%), Positives = 237/341 (69%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N EDP +W + +A+ L +E++ LD + ++++ L DN Sbjct: 43 GGIFDYDAKYERLRTVNASLEDPSVWNDPKKAQELGKEKKLLDGVVLTLQKLTTELADNA 102 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E++ EE D + L +++ +E +F + EAD + ++++ AGAGGTE+ Sbjct: 103 ELFEMSKEEGDETGLLTIEGETAKLQPLIEELEFRRMFGKEADPLNCFVDIQAGAGGTEA 162 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA MLLR Y ++AE++ FK E G+ AGIKSAT+ I+G AYG L+ E GVHRL Sbjct: 163 CDWAGMLLRQYLKYAERKGFKATVEEETPGDIAGIKSATIHIEGEYAYGLLRTETGVHRL 222 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP +DDSI+IEI+ SD R DTYRASGAGGQH+N TDSAV Sbjct: 223 VRKSPFDSSGGRHTSFASLFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTDSAV 282 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PTG+VVQCQ RSQH N+ AW LR+KLYE E+QKR E +KT++GWG Sbjct: 283 RLTHMPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGH 342 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 343 QIRSYVLDNSR-IKDLRTNVEISATQKVLDGDLDAFIEASL 382 >gi|78776561|ref|YP_392876.1| peptide chain release factor 2 [Sulfurimonas denitrificans DSM 1251] gi|123550812|sp|Q30TP0|RF2_SULDN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|78497101|gb|ABB43641.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas denitrificans DSM 1251] Length = 365 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 172/350 (49%), Positives = 243/350 (69%), Gaps = 4/350 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++++ + G+ + D +R++ ++ W + A ++ +++ + + Sbjct: 13 LSKKMSNITGVVEPDKLYKRVAQIDELENSQDFWNDSSNAALVQKDKTQCERKLKKYNLA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + D L E+A EE+D ++ E + Q I+ + + E LLS E D N+A L +H Sbjct: 73 KNAIDDAKELYEMAKEENDEDLIAECFNGAQHIEDLIRTMEIEVLLSEETDGNNAILSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++LLRMY R+AE+R + E L+ G+EAGIK +LLI G NAYG+LK Sbjct: 133 PGAGGTESQDWASILLRMYKRFAERRGWSVEVLDYQAGDEAGIKDVSLLISGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN++RHTSFSS+ V P VDD I I I + D R+DTYR+SGAGGQH Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFSSVMVSPEVDDDINIVIEDRDIRVDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGES 301 VN T+SA+RITHI TGVVVQCQ +RSQHKN+A A ML+++LYELEL+ ++ EIA I Sbjct: 253 VNKTESAIRITHIATGVVVQCQNDRSQHKNRATAMKMLKSRLYELELENQKAEIAGI--- 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K+EIGWG QIRSYV+QPYQ +KD R+NI ++ S +LDGD+D ++ L Sbjct: 310 AKSEIGWGHQIRSYVMQPYQQIKDTRSNIAYSNVSAILDGDIDKMIEDVL 359 >gi|254468217|ref|ZP_05081623.1| peptide chain release factor 2 [beta proteobacterium KB13] gi|207087027|gb|EDZ64310.1| peptide chain release factor 2 [beta proteobacterium KB13] Length = 351 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 168/341 (49%), Positives = 240/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G +FD DN ++L L + EDP +W++ ++ + +E++ L++ I +++ + +N Sbjct: 8 GAIFDLDNKKEQLKELTRQQEDPKIWEDHSLSQKIGKEKRILEDTIQEFEQLNSGIENNK 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L +LA EE D S L + + + ++ +F+ + S D N+ +++ +G+GGTE+ Sbjct: 68 ELFDLAFEESDDSTLNDLFQDTINLDKKLGQLEFKRMFSNPLDPNNCFIDFQSGSGGTEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWANMLLRMY R+ E++ FK E +EI +GE AGIK AT+ I G AYG+ + E G+HRL Sbjct: 128 QDWANMLLRMYLRYCEEKGFKVEVMEITEGEVAGIKGATIKIIGDYAYGYFRTETGIHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS SRRHTSF+ + VYP +D+S+EI+I+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 188 VRKSPFDSGSRRHTSFAGVNVYPEIDESVEIDINPADLRIDTYRASGAGGQHINKTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+GVVVQCQ +RSQH+NKAQA +ML+A+LY +EL KR E E +K++IGWG Sbjct: 248 RITHEPSGVVVQCQNDRSQHRNKAQAMDMLKAQLYRIELDKRNEEKQAMEDAKSDIGWGH 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDG+LD F+ +L Sbjct: 308 QIRSYVLDQSR-IKDLRTGVEVGNTQGVLDGNLDPFITESL 347 >gi|187927990|ref|YP_001898477.1| hypothetical protein Rpic_0895 [Ralstonia pickettii 12J] gi|238691788|sp|B2U8V1|RF2_RALPJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|187724880|gb|ACD26045.1| conserved hypothetical protein [Ralstonia pickettii 12J] Length = 367 Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 170/338 (50%), Positives = 245/338 (72%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +RL ++ + E+P +W + A+ L RE++ L+ + + ++ + L L Sbjct: 27 LDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKLDEDLTGAAELF 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA EE D ++ + ++ VE +F + SG D+ + ++++ AGAGGTE+ DW Sbjct: 87 ELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEACDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLR Y ++ E++ FKTE LE +G+ AGIKSA++ ++G A+G+L+ E GVHRLVR Sbjct: 147 ASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E++KT++GWG QIR Sbjct: 267 HIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAAKTDVGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 327 SYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363 >gi|261420549|ref|YP_003254231.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61] gi|297531361|ref|YP_003672636.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3] gi|319768218|ref|YP_004133719.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52] gi|261377006|gb|ACX79749.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61] gi|297254613|gb|ADI28059.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3] gi|317113084|gb|ADU95576.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52] Length = 367 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 180/355 (50%), Positives = 244/355 (68%), Gaps = 4/355 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L + G D + R+ L + P+ W + A+ ++ E L + + Sbjct: 13 KMAKRLAEIRGSLDLEAKQARIRELEEQMAAPNFWDDQKAAQAVISEVNALKDLVEEFSS 72 Query: 62 IQDRLCDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +++R DNL + EL EE D + E + +++ + + + LL+ D N+A LE Sbjct: 73 LEERF-DNLEVTYELLKEEPDDELQAELVEEAKKLMKDFSEFELQLLLNEPYDQNNAILE 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+ GEEAGIKS TLLIKG NAYG+ Sbjct: 132 LHPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGY 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E+GVHRLVRISP+D++ RRHTSF S V P +DD+IEIEI + +IDTYR+SGAGG Sbjct: 192 LKAEKGVHRLVRISPFDASGRRHTSFVSCEVVPELDDNIEIEIRPEELKIDTYRSSGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIG 299 QHVNTTDSAVRITH+PTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ E+A + Sbjct: 252 QHVNTTDSAVRITHLPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEL- 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L K Sbjct: 311 RGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 365 >gi|313888002|ref|ZP_07821680.1| peptide chain release factor 2 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845957|gb|EFR33340.1| peptide chain release factor 2 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 371 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 182/350 (52%), Positives = 241/350 (68%), Gaps = 8/350 (2%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LG + D+ +++ LN K +P W + A+ ++RE I ++ D + D Sbjct: 21 SLGESLEIDSLKEKVVELNKKQMEPGFWDDNESAQKVIRETNSYQRKIDQYDKLIDLITD 80 Query: 69 --NLILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 +LI L + +EED S QE D +++ E + +LL+GE DS+DA L +HAG Sbjct: 81 AEDLIAL-MEIEEDYSSYSDFQELVDEIEKDTAEF---KLNTLLNGEYDSHDAILSIHAG 136 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDWA+MLLRMYTR+AE + FK E L++ +EAGIKS TL I G NAYG+LKGE Sbjct: 137 AGGTEAQDWASMLLRMYTRYAENKGFKVETLDLLKEDEAGIKSVTLKISGDNAYGYLKGE 196 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +GVHRLVRISP+DSN RRHTSFSS+ V+P +DD E+EI + + +IDTYR+SGAGGQHVN Sbjct: 197 KGVHRLVRISPFDSNKRRHTSFSSVDVFPEIDDDTEVEIKDEELKIDTYRSSGAGGQHVN 256 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITHIPTG+VVQCQ ERSQ +N+ +A NML+AKL L ++++E + + + Sbjct: 257 TTDSAVRITHIPTGIVVQCQNERSQIQNREKAMNMLKAKLVALAEEEKKEKIEDLQGNYS 316 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +I WG QIRSYV QPY MVKD RTN++ V+DGDLD F+ A L K Sbjct: 317 QIAWGSQIRSYVFQPYTMVKDHRTNVDVGDVEKVMDGDLDIFINAYLQDK 366 >gi|332284056|ref|YP_004415967.1| peptide chain release factor 2 [Pusillimonas sp. T7-7] gi|330428009|gb|AEC19343.1| peptide chain release factor 2 [Pusillimonas sp. T7-7] Length = 359 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 174/342 (50%), Positives = 245/342 (71%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P +W + A+ L RE++ L+ + + +I + L D Sbjct: 15 FGGIFDYDAKAERLHVVNAELESPDVWNDPKHAQDLGREKKSLETVVHTLADIANGLTDA 74 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L +LA E+DD + L + I +E +F + S AD + ++++ AGAGGTE Sbjct: 75 QELFDLAAEDDDDATLAAVEADTNAIGARLEELEFRRMFSNPADPLNCFMDIQAGAGGTE 134 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA++LLR Y R+ E + FKTE LE DG+ AGIKSAT+ I+G A+G L+ E GVHR Sbjct: 135 AQDWASILLRQYLRYCEHKDFKTEVLEESDGDVAGIKSATIKIEGEYAFGLLRTETGVHR 194 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS + RHTSF+S++VYP VD+S+EI+I+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 195 LVRKSPFDSANGRHTSFASVFVYPEVDESVEIDINPADLRVDTYRASGAGGQHINKTDSA 254 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYELE++ R E SKT++GWG Sbjct: 255 VRITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYELEMRNRMAEQQKMEDSKTDVGWG 314 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 315 HQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 355 >gi|296134253|ref|YP_003641500.1| hypothetical protein TherJR_2767 [Thermincola sp. JR] gi|296032831|gb|ADG83599.1| hypothetical protein TherJR_2767 [Thermincola potens JR] Length = 371 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 172/352 (48%), Positives = 241/352 (68%), Gaps = 1/352 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L+ +L L D V+ ++ L KT + W N +EA+ +MRE L + I Sbjct: 10 IELAERLEELRVSLDIAGKVRAVNALEEKTAEQGFWDNPVEAQKVMREINDLKDTIGLYN 69 Query: 61 EIQDRLCDNLILLELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 ++ + D L EL +E+DD I +E + +++ ++ VE + LL + D +A + Sbjct: 70 TLKRQYDDVYTLWELGMEDDDPDEIEKEVARDIRHLRHNVEQAELTLLLGDKYDKGNAII 129 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 +HAGAGGTE+QDW MLLRMYTRWAE++ +K + L++ G+EAGIKSA++ I+GP AYG Sbjct: 130 SLHAGAGGTEAQDWVQMLLRMYTRWAEEKGYKIDTLDLLPGDEAGIKSASISIEGPYAYG 189 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E+GVHRLVRISP+D++ RRHTSF+S+ V P VDD EI I +D RIDT+R+ GAG Sbjct: 190 YLKSEKGVHRLVRISPFDASGRRHTSFASVDVLPEVDDETEIVIDPADLRIDTFRSGGAG 249 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN TDSAVRITHIPTG+VVQCQ ERSQH N+ +A +L+A+L +LE++K+EE N Sbjct: 250 GQHVNKTDSAVRITHIPTGIVVQCQNERSQHSNRLKAMKLLQARLLDLEIKKKEEELNKL 309 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EI WG QIRSYV PY +VKD RT +E + V+DG++D+F+ A L Sbjct: 310 RGEQQEIAWGSQIRSYVFHPYSLVKDHRTGVETGNVQAVMDGEIDEFIAAYL 361 >gi|299144433|ref|ZP_07037513.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518918|gb|EFI42657.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 348 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 179/342 (52%), Positives = 238/342 (69%), Gaps = 2/342 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD ++ LN K D W N A+ ++RE+ H + I ++ + + L Sbjct: 4 LFDLSEMRNKVKELNDKQMDVGFWDNAENAQKVIREQNHYQSKIDKYDKLIKSINEAEDL 63 Query: 73 LELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++L EDD S + +L+ I KL ++K E+LL+GE DSN+ + +HAGAGGTE+Q Sbjct: 64 IDLMEMEDDYSFYGDLKLDLENIEKLSNDFK-LETLLNGEYDSNNCIISIHAGAGGTEAQ 122 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY R+AEKR F+ E L++ EEAGIKS TLLI G NAYG+LKGE+GVHRLV Sbjct: 123 DWASMLNRMYVRYAEKRGFRVETLDMLKEEEAGIKSVTLLITGDNAYGYLKGEKGVHRLV 182 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+D+N RRHTSF+S+ VYP +DD E+EI D +IDTYR+SGAGGQHVNTTDSAVR Sbjct: 183 RISPFDANKRRHTSFASLDVYPQLDDDNEVEIKAEDLKIDTYRSSGAGGQHVNTTDSAVR 242 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+VVQCQ ERSQ +N+ +A NML+AKL L ++++E + + ++I WG Q Sbjct: 243 ITHIPTGIVVQCQNERSQIQNRDKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQ 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYV QPY +VKD RTN E + V+DG LD+F+ + L + Sbjct: 303 IRSYVFQPYTLVKDHRTNTEIGDVNKVMDGYLDEFINSYLQL 344 >gi|170723283|ref|YP_001750971.1| peptide chain release factor 2 [Pseudomonas putida W619] gi|169761286|gb|ACA74602.1| peptide chain release factor 2 [Pseudomonas putida W619] Length = 304 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 167/300 (55%), Positives = 222/300 (74%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + ++ L D LL++A+EE+D S + + LQ ++ ++ +F + SGE Sbjct: 2 LAQVVETLDKMSGGLADCQDLLDMAVEENDESAVSDVVTELQGLEEKLAQLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ Sbjct: 62 MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EI+I+ SD RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPSDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E SK++IGWG QIRSYVL + +KDLRT +E++ + VLDGD+D +++A+L Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCNKVLDGDIDQYLEASL 300 >gi|302131691|ref|ZP_07257681.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 304 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 165/296 (55%), Positives = 220/296 (74%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + E+ L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N Sbjct: 6 VETLDEMSSGLVDAKDLLLMSAEEEDQAAIDDVAAEVERLRASLEKLEFRRMFSGEMDPN 65 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG Sbjct: 66 NAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGE 125 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+ Sbjct: 126 YAFGWLRTEIGVHRLVRKSPFDSGTRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRS 185 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR Sbjct: 186 SGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAA 245 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E +K++IGWG QIRSYVL + +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 246 SQALEDTKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 300 >gi|294340483|emb|CAZ88864.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As] Length = 331 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 165/321 (51%), Positives = 235/321 (73%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 EDP +W + A+ L RER+ L+ + ++ + L D+ L E++ EE D + + Sbjct: 8 EDPQVWNDPKRAQELGRERKSLETVVLGLESLTTALADHSELFEMSREEGDDATCEAIEA 67 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 ++++ EVE +F + S D ++ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ F Sbjct: 68 DVEKSADEVEALEFRRMFSNPLDPSNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGF 127 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 KTE +E +G+ AGI+SAT+ ++G AYG L+ E GVHRLVR SP+DS+ RHTSF+S++ Sbjct: 128 KTEVMEETEGDVAGIRSATIKVEGDYAYGQLRTETGVHRLVRKSPFDSSGGRHTSFASVF 187 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 VYP VDDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH Sbjct: 188 VYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQH 247 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+A+AW MLR++LYE E++KR ES+K+++GWG QIRSYVL + +KDLRTN+ Sbjct: 248 KNRAEAWQMLRSRLYEHEMRKRMAEQQTLESTKSDVGWGHQIRSYVLDQSR-IKDLRTNV 306 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E ++ VLDGDLD+F+ A+L Sbjct: 307 EISNTQKVLDGDLDEFITASL 327 >gi|281357586|ref|ZP_06244073.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548] gi|281315843|gb|EFA99869.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548] Length = 364 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 181/326 (55%), Positives = 233/326 (71%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K P W N A+ + + N + +++Q + D +ELA E+++ L Sbjct: 37 LEQKMSAPDFWDNKESAQNTVAQLSACRNLLEPFRKLQSEVEDYSASVELAAEDEE--FL 94 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 QET + +R+ ++ + S LSG+ D ++ Y VHAGAGGTES DWANMLLRMY R+ Sbjct: 95 QETEISYRRLLKSLDRMEIMSFLSGKFDRSNLYFSVHAGAGGTESCDWANMLLRMYRRYF 154 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+R +K E +++ GEEAG+KSATL + G AYG++KGE+GVHRLVRISP+DSN+RRHTS Sbjct: 155 ERRGWKDEVIDLQPGEEAGVKSATLHVTGEFAYGYMKGEKGVHRLVRISPFDSNARRHTS 214 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F S+ V+P +DD IEIEI ES RIDTYR+SGAGGQHVNTTDSA+RITH+PTG+VV CQ Sbjct: 215 FVSVDVFPELDDDIEIEIDESQLRIDTYRSSGAGGQHVNTTDSAIRITHLPTGIVVCCQN 274 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A A ML+AKLYE E +KR A+ K E GWG QIRSYVLQPYQMVKD Sbjct: 275 ERSQHKNRATAMKMLKAKLYEFEEEKRRNEADAIRGEKAENGWGSQIRSYVLQPYQMVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT +E + + VLDGD+D+F++A L Sbjct: 335 LRTEVETSDTAGVLDGDIDEFIEAYL 360 >gi|253988706|ref|YP_003040062.1| peptide chain release factor 2 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211637969|emb|CAR66597.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780156|emb|CAQ83317.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica] Length = 310 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 172/307 (56%), Positives = 222/307 (72%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ + I +++ L D LLELA+E DD E L++++ ++ +F Sbjct: 1 MGKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFHEAVAELEQLEGKLGQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DGE AG Sbjct: 61 RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ Sbjct: 121 LKSATIRIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD Sbjct: 241 YELEMQKKNANRQEMEENKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 KFIEASL 306 >gi|94500761|ref|ZP_01307290.1| peptide chain release factor 2 [Oceanobacter sp. RED65] gi|94427083|gb|EAT12064.1| peptide chain release factor 2 [Oceanobacter sp. RED65] Length = 310 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 167/307 (54%), Positives = 219/307 (71%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + RER L+ + I ++ L D LL++++ EDD + E L ++ ++E +F Sbjct: 1 MGRERSALEAVVQTIDDMDTGLSDCDELLQMSVAEDDADSVDEVVSELNELQAKLEKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGEAD N AYL++ AG+GGTE+QDWA M+LRMY RW E + FK E +E G+ AG Sbjct: 61 RRMFSGEADENSAYLDIQAGSGGTEAQDWAEMILRMYLRWGEAKGFKVELMEASAGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ +G A+GWL+ E GVHRLVR SP+DS+ RRHTSF+S++V P +DD+IEI+I+ Sbjct: 121 IKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFASVFVSPEIDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVNTT+SAVRITH+PT V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVTQCQNQRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +ELE+QKR E SK++IGWG QIRSYVL + +KDLRT +E + VLDG LD Sbjct: 241 FELEMQKRNADTQALEESKSDIGWGSQIRSYVLDDAR-IKDLRTGVENRNTQQVLDGALD 299 Query: 345 DFMKATL 351 FM+A+L Sbjct: 300 PFMEASL 306 >gi|323340175|ref|ZP_08080439.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644] gi|323092366|gb|EFZ34974.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644] Length = 358 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 167/343 (48%), Positives = 233/343 (67%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD D + ++ +K DP W N EA+ ++ E L N ++++ + D Sbjct: 6 TLGGLFDLDGLQEAIADNESKMADPDFWNNQEEAQKVINENNELKNKYDNFNQLEEAIED 65 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +LLE+ E+DD ++ E S+ + + +++ Q LL+G+ D ++A LE+H GAGGT Sbjct: 66 LEVLLEMVQEDDDDELVSELSEKFELAQKKMQEYQLSLLLNGKYDKDNAILELHPGAGGT 125 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDW +MLLRMYTRWAE+ F E + G+EAGIKS TL I G NAYG+L+ E+GVH Sbjct: 126 ESQDWGSMLLRMYTRWAEQHGFSVETDDYQAGDEAGIKSVTLTISGHNAYGYLRSEKGVH 185 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS RRHTSF S+ V P +DD +E+++ D +++ +R+SGAGGQH+N T S Sbjct: 186 RLVRISPFDSAGRRHTSFCSVNVMPELDDDVEVDLRPEDIKMEVFRSSGAGGQHINKTSS 245 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+ HIPTG+VV Q +RSQ +N+A A MLR+KLY++EL+++E+ + + +IGW Sbjct: 246 AVRLIHIPTGIVVSSQAQRSQFQNRATAEKMLRSKLYQMELEEQEKKRAAIQGEQLDIGW 305 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYV PY MVKD RTN E + S V+DGDLD F+ A L Sbjct: 306 GSQIRSYVFHPYSMVKDHRTNYETGNISSVMDGDLDGFINAYL 348 >gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1] gi|229576671|sp|B2V5M0|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1] Length = 369 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 179/326 (54%), Positives = 231/326 (70%), Gaps = 6/326 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLILLELALEEDDCSILQET 88 DP+ W + +A+ + R +L + I + + L D + LLE+ E+D + E Sbjct: 42 DPNFWNDTKKAQEISSRRNYLGEKLEEILTVDKKVNNLLDYITLLEM---EEDQELYNEV 98 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 L+ I+ E+ + SLLS E DS +A L V AG+GG E+ DW MLLRMYTRWAEKR Sbjct: 99 EKELKEIEKEISRLELGSLLSDEMDSKNAILTVQAGSGGVEACDWTEMLLRMYTRWAEKR 158 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 ++ E ++ + AG+KSATL+IKGP AYG+LKGEQGVHRLVRISP+D+N RRHTSFS+ Sbjct: 159 GYQVELVDFQPDDVAGVKSATLIIKGPYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSA 218 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +D+ I++EI+E D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ ERS Sbjct: 219 VSVIPEIDEDIKVEINEEDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGIVVACQSERS 278 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +NK +A NML+AKLY+LEL+KR+E E K +I WG QIRSYV QPYQMVKDLRT Sbjct: 279 QLQNKLKATNMLKAKLYQLELEKRKEKQKELEGEKKDITWGSQIRSYVFQPYQMVKDLRT 338 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++DDF+++ L K Sbjct: 339 GFETGNIEAVMDGEIDDFIESYLKWK 364 >gi|118580454|ref|YP_901704.1| peptide chain release factor 2 [Pelobacter propionicus DSM 2379] gi|118503164|gb|ABK99646.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter propionicus DSM 2379] Length = 361 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 173/342 (50%), Positives = 237/342 (69%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GGLFD D + + + +K P W N ++ +++ER L+ + + + D Sbjct: 9 GGLFDVDGKRESIQEIESKIAAPGFWDNADSSQGILKERTSLEKIVQLWDSLVRQQEDVR 68 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +++EL EE D L+E + R++ VE +F+ +LSGE D N ++ ++ GAGGTES Sbjct: 69 VMIELGEEEADEETLKEVGEMNNRLQQGVEAAEFQRMLSGEHDRNSCFISINPGAGGTES 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY R+ EK+ +KT + G+EAGIKSAT + G AYG+LK E G+HRL Sbjct: 129 QDWAEMLLRMYLRYCEKKGWKTSITDYQSGDEAGIKSATFSVSGEYAYGYLKAEAGIHRL 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VRISP+DSN+RRHTSF+S++ +P +++ I+I+I++SD R+DT+R+ GAGGQHVNTTDSA Sbjct: 189 VRISPFDSNARRHTSFASVYAFPEIEEEDIDIKIADSDLRVDTFRSGGAGGQHVNTTDSA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +VV CQ ERSQ N+A A +LRAKLYE E+Q+R A+ S K EIGWG Sbjct: 249 VRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEVQERTARASEIASEKKEIGWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL PY+MVKDLRT +E +P VLDG L++F+ A L Sbjct: 309 SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEEFVVAYL 350 >gi|291279507|ref|YP_003496342.1| peptide chain release factor RF-2 [Deferribacter desulfuricans SSM1] gi|290754209|dbj|BAI80586.1| peptide chain release factor RF-2 [Deferribacter desulfuricans SSM1] Length = 375 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 179/321 (55%), Positives = 236/321 (73%), Gaps = 2/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 EDP W N E+K L++E+ L +S +E+ D +L+EL +E + ++ Sbjct: 44 EDPDFW-NKKESKQLLKEQASLKKFLSEWEELLTIREDIDVLIEL-FKEGSEEVKEDIIS 101 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 NL +K V + + +L+GE D N+A + +HAGAGGTE+ DW +ML RMYTRW E++K+ Sbjct: 102 NLNELKKRVSDFELKLILNGEHDINNAIVTIHAGAGGTEACDWVSMLFRMYTRWVERKKY 161 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E L++ G+EAGIKS T + G +YG+LKGE GVHRLVRISP+DSN+RRHTSF+S++ Sbjct: 162 KYEILDMLPGDEAGIKSITFNVIGEYSYGYLKGESGVHRLVRISPFDSNNRRHTSFASVF 221 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +DD I+IEI+ESD +I+T+RASGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQH Sbjct: 222 VLPEIDDEIDIEINESDLKIETFRASGAGGQHVNTTDSAVRITHLPTGIVVSCQNERSQH 281 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNKA A +L+A+LYE E++KR + ESSKTEIGWG QIRSYV+ PY+MVKDLRT Sbjct: 282 KNKAHAMKILKARLYEYEMEKRNKEKEKLESSKTEIGWGNQIRSYVMHPYKMVKDLRTRY 341 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DGD+DDF+K L Sbjct: 342 ETGNVDAVMDGDIDDFIKTYL 362 >gi|192358804|ref|YP_001982940.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107] gi|190684969|gb|ACE82647.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107] Length = 329 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 168/317 (52%), Positives = 226/317 (71%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W N A+ L RER L+ + I+ + + D LL++A+EE+D S++ + + R Sbjct: 10 VWDNPERAQALGRERSSLEIVVKTIESLDSGVADCGELLDMAVEENDESMVADVQAEIDR 69 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ E+ +F + SGE D N+AYL++ +G+GGTE+QDWA M+LRMY RW E + FK Sbjct: 70 LEKELGVLEFRRMFSGETDPNNAYLDIQSGSGGTEAQDWAEMVLRMYLRWGEAKGFKVTL 129 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 E GE AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHTSF S++V P Sbjct: 130 EECSAGEVAGIKSATIYFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFCSVFVSPE 189 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD+IEIEI+ +D RIDTYRASGAGGQHVN TDSA+RITHIP+G+VVQCQ ERSQH N+ Sbjct: 190 IDDNIEIEINPADLRIDTYRASGAGGQHVNKTDSAIRITHIPSGIVVQCQNERSQHANRD 249 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 +A+ MLRA++YE E+ KR E SK++IGWG QIRSYVL + VKDLRT ++ ++ Sbjct: 250 KAYKMLRARMYEQEMLKRNAEKQAMEDSKSDIGWGSQIRSYVLDDSR-VKDLRTGVQTSN 308 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F+ +L Sbjct: 309 TQAVLDGDLDQFIVESL 325 >gi|124515298|gb|EAY56808.1| Peptide chain release factor 2 [Leptospirillum rubarum] Length = 370 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 174/353 (49%), Positives = 239/353 (67%), Gaps = 5/353 (1%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M+ +R GG+FD D L ++ +++ P W++ A+ ++RE+ L+ +S I+ Sbjct: 1 MEKNRGFPRSGGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQ 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 I+ D L ELA D L E S + V+ + E +LS N A+LE Sbjct: 61 GIEKEDADIRALFELA---SDPDFLAELSRRVPEFSESVKAFELEEILSDAKSDNPAFLE 117 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTESQDWA MLLRMY RWAE+ E ++I GEEAGIKSAT+L++G +A+G+ Sbjct: 118 IHPGAGGTESQDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGY 177 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G+HRLVRISP+D+N RRHTSF+S++VYP ++D I +EI + D RIDT+RAS AGG Sbjct: 178 LMSESGIHRLVRISPFDANKRRHTSFTSVFVYPELEDDIPVEIRDEDIRIDTFRASSAGG 237 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-- 298 QHVN T SA+R+TH+PTG+V+ Q ERSQ +N+ A+ +LRAKLYELE ++++E + Sbjct: 238 QHVNKTSSAIRLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKIS 297 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +K EIGWG QIRSYVLQPYQ++KD RT +E S+VLDGDLD F++ L Sbjct: 298 GAQNKKEIGWGHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYL 350 >gi|283479628|emb|CAY75544.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM 12163] Length = 310 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 170/307 (55%), Positives = 222/307 (72%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ + + ++ L D LLELA+E +D E + L + ++ +F Sbjct: 1 MGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGELEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG Sbjct: 61 RRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS+++YP VDD+I+IEI+ Sbjct: 121 TKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE E+QK+ E +K++IGWG QIRSYVL + +KDLRT++E + VLDGDLD Sbjct: 241 YEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 RFIEASL 306 >gi|260771153|ref|ZP_05880080.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972] gi|260613750|gb|EEX38942.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972] gi|315179241|gb|ADT86155.1| peptide chain release factor 2 [Vibrio furnissii NCTC 11218] Length = 320 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 169/317 (53%), Positives = 226/317 (71%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W A+ L +ER L+ + I ++ + D LLELA+E +D E L+ Sbjct: 1 MWNEPERAQALGKERSSLEAVVETIDQLDQGVDDVEGLLELAVEAEDQETFDEIGPELEE 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ +F + SG+ DS+D YL++ AG+GGTE+QDW +M+LRMY RWA+ + FKTE Sbjct: 61 LESKLAKLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMMLRMYLRWADAKGFKTEV 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S +VYP Sbjct: 121 IEVSEGDVAGLKSATVRIVGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD+I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Sbjct: 181 IDDNIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNDRSQHKNKD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA LRAKL+ELELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 241 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 300 TQAVLDGDLDKFIEASL 316 >gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica ACS-134-V-Col7a] gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6] gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6] gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica ACS-134-V-Col7a] Length = 330 Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 165/320 (51%), Positives = 226/320 (70%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W N +A+ + +E L N++ K++ + D ++L++A+EE+D S+ E Sbjct: 3 DPTFWDNPDKAREISQEATQLKNSVEGYKQLVSDIEDASVMLDMAIEEEDTSMEGEIKQF 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + I+ VE ++ LL GE D N+A L HAGAGGTE+QDW +ML+RMY RWAEK F Sbjct: 63 VNGIQEAVEKQEVLLLLGGEYDQNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKTGFS 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ V Sbjct: 123 VELMDEQPGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ + Sbjct: 183 MPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQRSQMQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY MVKD RT++E Sbjct: 243 NREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNMVKDHRTSVE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG++D F++ L Sbjct: 303 TGNVQAVMDGNIDQFIEGYL 322 >gi|301165910|emb|CBW25483.1| peptide chain release factor 2 [Bacteriovorax marinus SJ] Length = 358 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 175/345 (50%), Positives = 228/345 (66%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG F+ + RLS ++ W + A + +E+ L + + +++ Sbjct: 1 MKTYGGHFEVERKSARLSEISDMEAMEGFWDDSDNAAKVQKEKSVLSDVVETYTTLKELF 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + +L+E A E+D E D + + + + LLSGE D N+A + ++AGAG Sbjct: 61 DEFEVLVEFANGEEDEDSALEAIDCYDKFLKQFNAAELKVLLSGEVDPNNAIVSINAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA+ML RM RWAE + FK + L++ DG+ AGIKSAT+ I G AYG+LK E G Sbjct: 121 GTESCDWASMLFRMINRWAESKAFKVQVLDVQDGDSAGIKSATMTISGNYAYGYLKSEIG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DSN+RRHTSFSSI+V P +DD+IEIEI + D +ID YR+ GAGGQ VNTT Sbjct: 181 VHRLVRISPFDSNARRHTSFSSIFVSPEIDDNIEIEILDKDLKIDVYRSGGAGGQSVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPT VV CQ ERSQ +NK QA +LR++LYELE++KR E+SK EI Sbjct: 241 DSAVRITHIPTNTVVTCQNERSQLQNKLQAMKVLRSRLYELEMEKRRAQEAETEASKQEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL PY++VKD RT+ E + VLDGDLD FM A L Sbjct: 301 GWGAQIRSYVLHPYKLVKDTRTSFESGNAEKVLDGDLDGFMDAFL 345 >gi|300722130|ref|YP_003711413.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC 19061] gi|297628630|emb|CBJ89208.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC 19061] Length = 310 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 171/307 (55%), Positives = 222/307 (72%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L++ + I ++ L D LLELA+E DD E L +++ ++ +F Sbjct: 1 MGKERSSLESIVETIDQLDQGLEDVNGLLELAVEADDEETFNEAVAELDQLEEKLGLLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG Sbjct: 61 RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ Sbjct: 121 LKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHMPTGIVTQCQTDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD Sbjct: 241 YELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 KFIEASL 306 >gi|88658024|ref|YP_507510.1| peptide chain release factor 2, programmed frameshift [Ehrlichia chaffeensis str. Arkansas] gi|88599481|gb|ABD44950.1| peptide chain release factor 2, programmed frameshift [Ehrlichia chaffeensis str. Arkansas] Length = 366 Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 172/355 (48%), Positives = 239/355 (67%), Gaps = 2/355 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L + L + G D DN L+ L+ + LW + A+ ++ ER + ++ Sbjct: 12 VSLGKALQLIRGHLDIDNLTSLLADLSLQCSSTSLWDDNSLAQRILCERARISKTLNSFT 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+++ LL + + D +L E L ++K +V+ K+ E L S EAD ND ++E Sbjct: 72 ELEEEYNYYTELLSV-INNDTDELLNELEAGLAKLKEKVQKKEVECLFSNEADHNDCFIE 130 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGGTES DW++ML RMY RWAE FKTE + DGEE G+KSAT+ + G NAYG Sbjct: 131 IQSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYG 190 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 W K E G+HRLVRISP++SN++RHT+FSSI V PV+++ IEI + D RIDTYRASGAG Sbjct: 191 WAKTESGIHRLVRISPFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAG 250 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T+SAVRITHIP+G+VVQCQ RSQH+N A+A N+L+++LY+L+LQ++E+ Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEE 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + IGWG QIRSYV+ PYQMVKD+RT E + + VLDG+LD F+ + L K Sbjct: 311 HNKRCNIGWGNQIRSYVMHPYQMVKDIRTGHEVGNVNSVLDGNLDSFIISALTTK 365 >gi|329896805|ref|ZP_08271721.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088] gi|328921560|gb|EGG28940.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088] Length = 321 Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 168/317 (52%), Positives = 226/317 (71%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W + A+ L +ER L+ + I+ + + D LL+L + E+D L++ +Q+ Sbjct: 1 MWDDPERAQALGKERAALEAIVVSIETLTEGANDTADLLDLVVAENDVDSLEDIKSEIQK 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + ++ +F + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RW E + FKTE Sbjct: 61 LLAILDELEFRRMFSGEVDENNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEAKGFKTEL 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P Sbjct: 121 IECSAGEVAGIKSATIKFDGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH+PTGVVVQCQ ERSQH+N+ Sbjct: 181 IDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGVVVQCQTERSQHQNRD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A +LR KLYELE+ KR E E SK +IGWG QIRSYVL + +KDLRT +E ++ Sbjct: 241 NAMKLLRGKLYELEMLKRSEKQQALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGVETSN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDG +D F++A+L Sbjct: 300 TQAVLDGAIDMFIQASL 316 >gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484] gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484] Length = 372 Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 174/337 (51%), Positives = 237/337 (70%), Gaps = 5/337 (1%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ + L L+ H+W +AK +++ R+ L+ I ++ + L D LL + Sbjct: 26 DSMKEELKELDNLMASSHIWNQQEKAKKILQRRKWLEENIQQLEATEKVLSDIRELLHIT 85 Query: 77 LEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 EED ++L+E + +++ ++E + F LSGE D+ +AYL + AGAGG E+ DWA Sbjct: 86 EEEDLETQTLLKEELEKAEQMIKDMEIRAF---LSGEMDAKNAYLTIQAGAGGVEACDWA 142 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RWAEK ++ E ++I + AGIKSATLLIKGP AYG+LKGE GVHRLVRIS Sbjct: 143 QMLLRMYRRWAEKHGYEVEVVDITPDDVAGIKSATLLIKGPYAYGYLKGESGVHRLVRIS 202 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D+N+RRHTSF+S+ V P +D+SI IEI E D ++T+RASGAGGQ+VN TD+AVRI H Sbjct: 203 PFDANARRHTSFASVTVVPQIDESINIEIREEDIEMETFRASGAGGQYVNKTDTAVRIRH 262 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 PTG+VV CQQERSQ++N+ +A +L+AKLY+L+LQ+ EE E KTEIGWG QIRS Sbjct: 263 KPTGIVVTCQQERSQYQNRMKALELLKAKLYQLKLQELEEKKRALEGEKTEIGWGHQIRS 322 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YV QPYQ+VKDLRT +E V+DG++D F++A L Sbjct: 323 YVFQPYQLVKDLRTGVEIGDVESVMDGEIDPFIEAYL 359 >gi|222530070|ref|YP_002573952.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM 6725] gi|222456917|gb|ACM61179.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM 6725] Length = 372 Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 173/350 (49%), Positives = 237/350 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K L +G LFD D L L T+T P WQ++ ++ ++++ + + + I ++ Sbjct: 13 KAEEDLKEMGFLFDIDGLESELKSLETETSKPEFWQDIENSQRILQKIKRIKDKIERFQK 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D +L EL++EE + + +E L ++ +++ + E LL+G D N+A L + Sbjct: 73 LYSQWEDLKVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+L Sbjct: 133 HAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDTYR+SGAGGQ Sbjct: 193 KAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + Sbjct: 253 HVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 313 EQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 362 >gi|189183642|ref|YP_001937427.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str. Ikeda] gi|189180413|dbj|BAG40193.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str. Ikeda] Length = 287 Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 159/277 (57%), Positives = 211/277 (76%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A++E+D + ++++ E + Q E L + + D ND +L+++AGAGGTES DWA Sbjct: 4 IAIKENDIEFIHNIEQEWKKLQEEAKKLQVECLFTSDVDVNDCFLDINAGAGGTESNDWA 63 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +M+LRMY R+AE FKTE + + DGEEAG+KSA++ I G NAYGW K E GVHRLVR S Sbjct: 64 SMMLRMYLRFAESMNFKTEVVYLLDGEEAGVKSASVKICGHNAYGWFKTESGVHRLVRNS 123 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S WVYPV++D+I++ I + D RIDTYRASGAGGQHVNTTDSA+RITH Sbjct: 124 PFNALGKRMTSFASAWVYPVINDNIQVVIEDKDIRIDTYRASGAGGQHVNTTDSAIRITH 183 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 PT +VVQCQ +RSQHKNKA+A ML+AK+YELE +K+ EI N ++KT+ WG IRS Sbjct: 184 FPTKIVVQCQNDRSQHKNKAEAMRMLKAKIYELEQKKQNEIINNHNAAKTDNSWGYHIRS 243 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVLQPYQ+VKDLRTN+E + VLDGDL+ F+ A+L Sbjct: 244 YVLQPYQLVKDLRTNVETSDTKRVLDGDLEKFIYASL 280 >gi|301384023|ref|ZP_07232441.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. tomato Max13] gi|302058729|ref|ZP_07250270.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. tomato K40] gi|331016328|gb|EGH96384.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 304 Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 165/296 (55%), Positives = 220/296 (74%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + E+ L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N Sbjct: 6 VETLDEMSSGLVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPN 65 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG Sbjct: 66 NAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGE 125 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+ Sbjct: 126 YAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRS 185 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR Sbjct: 186 SGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAA 245 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E +K++IGWG QIRSYVL + +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 246 SQALEDTKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 300 >gi|73914009|sp|Q9CP66|RF2_PASMU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 365 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 179/349 (51%), Positives = 245/349 (70%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G D+D V+RL +N + E P +W +A+ L +ER L+ ++ I + Sbjct: 14 LTERTQVLRGYLDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVALEGVVNTIHTL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E +D + E L+ ++ ++ +F + SG+ D+ D Y+++ Sbjct: 74 DQGLEDVEGLLELAIEAEDEATFHEAVAELEELEQQLAKLEFRRMFSGQHDAADCYVDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AGIKSAT+ + G A+GWL+ Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIKSATIKVSGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+I+I+ +D RID YRASGAGGQH Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q L+AKLYE+ELQK+ E + Sbjct: 254 VNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 361 >gi|319942340|ref|ZP_08016655.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B] gi|319804213|gb|EFW01113.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B] Length = 354 Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 171/342 (50%), Positives = 237/342 (69%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD D +RL +N + E+P LW + A+ + +E++ LD+ + + + D Sbjct: 3 FGGIFDVDRKARRLEEVNREIENPDLWNDPKHAQEVSKEKKMLDDIVGSFNRLTQGIADA 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L EL+L E+D L+ +++ RI+ EV +F+ + + DS + YLE+ +GAGGTE Sbjct: 63 GELFELSLAEEDFDSLEVIGEDVDRIEHEVAQLEFKRMFNQPMDSANCYLEIQSGAGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML RMY R+AE++ FK E GE AGIKS TL I+G AYG L+ E G+HR Sbjct: 123 AQDWASMLERMYMRYAERKGFKVTLEEETPGEVAGIKSCTLFIEGEWAYGTLRTETGIHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+D+N+RRHTSF+S++VYP VDDSI+IEI+ +D ID +RASGAGGQH+ T+SA Sbjct: 183 LVRKSPFDANARRHTSFTSVYVYPEVDDSIDIEINPADLSIDVFRASGAGGQHIQKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H PTG++ CQ +RSQH+N+ +A L+AKLYELE++KR E E SK++IGWG Sbjct: 243 VRIHHKPTGIITICQDDRSQHRNREKAMQQLKAKLYELEMRKRMEAQTKLEESKSDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + VKDLRT +E + VLDGDLD F++A+L Sbjct: 303 HQIRSYVLDQSR-VKDLRTGVETGNTGGVLDGDLDQFIEASL 343 >gi|294788774|ref|ZP_06754015.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453] gi|294483256|gb|EFG30942.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453] Length = 367 Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 239/338 (70%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ +RL + +EDP LW + A+ + +ER+ L+ + + +++ + DN L+ Sbjct: 27 MDYQGKKERLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTMDNLENGIADNRELI 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++ +EE+D ++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 87 DMVVEENDTDGFAAIIADVADLETQMAALEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ FK + LE DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 147 AGMLFRMYSRYAERKGFKLDILEEDDGEIAGINRATIRVEGKYAYGLLRTETGVHRLVRY 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+N++RHTSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDANNKRHTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQH NKA A MLR+KL+ELE++KR E E K+++GWG QIR Sbjct: 267 HEPTGIVVQCQNDRSQHANKAAAMEMLRSKLFELEMRKRNEEKQALEEGKSDVGWGSQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|152971837|ref|YP_001336946.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896431|ref|YP_002921169.1| peptide chain release factor 2 [Klebsiella pneumoniae NTUH-K2044] gi|262042532|ref|ZP_06015689.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330010996|ref|ZP_08306940.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3] gi|150956686|gb|ABR78716.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548751|dbj|BAH65102.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040092|gb|EEW41206.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534333|gb|EGF60944.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3] Length = 320 Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 173/317 (54%), Positives = 222/317 (70%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W A+ L +ER L+ + + ++ L D LL+LA+E DD E L Sbjct: 1 MWNEPERAQALGKERSSLEAIVDTLDQMSQGLEDVAGLLDLAVEADDEETFNEAVAELDT 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ +F + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE Sbjct: 61 LEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEI 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E +GE AGIKS T+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP Sbjct: 121 IEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 V+D I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK Sbjct: 181 VEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA ++AKLYELE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 241 QAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDG LD F++A+L Sbjct: 300 TQAVLDGSLDQFIEASL 316 >gi|148263843|ref|YP_001230549.1| peptide chain release factor 2 [Geobacter uraniireducens Rf4] gi|146397343|gb|ABQ25976.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter uraniireducens Rf4] Length = 317 Score = 345 bits (885), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 163/308 (52%), Positives = 226/308 (73%), Gaps = 2/308 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +++ER ++ +S ++ D +L+EL E +D + L E ++ V + +F Sbjct: 1 MLKERTVMEKTLSAWDRFNRQVDDIRVLIELGSEAEDEATLAEVHGLNDELEKGVSHAEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + +LSG D++ ++ +++GAGGTESQDWA MLLRMY R+ E++ +KTE + G+EAG Sbjct: 61 QKMLSGPHDASSCFVSINSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQAGDEAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +K T + G YG+LK E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D IE++++ Sbjct: 121 VKGVTFSVSGEYGYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEVKVN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E+D R+DT+R+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQH NKA A +LRAKL Sbjct: 181 EADLRVDTFRSSGAGGQHVNTTDSAIRITHIPSGIVVACQTERSQHMNKATAMRVLRAKL 240 Query: 285 YELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 YE ELQ+RE + A IG K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDGDL Sbjct: 241 YERELQERESQAAEIG-GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGDL 299 Query: 344 DDFMKATL 351 ++F+ A L Sbjct: 300 EEFIVAFL 307 >gi|313500280|gb|ADR61646.1| PrfB [Pseudomonas putida BIRD-1] Length = 304 Score = 345 bits (885), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 167/300 (55%), Positives = 220/300 (73%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + ++ + L D LL++A+EE+D + + L+ ++ + +F + SGE Sbjct: 2 LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTELESLEENLAQLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ Sbjct: 62 MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E SK++IGWG QIRSYVL + +KDLRT +E++ VLDGDLD +++A+L Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDQYLEASL 300 >gi|227510661|ref|ZP_03940710.1| peptide chain release factor 2 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190313|gb|EEI70380.1| peptide chain release factor 2 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 354 Score = 345 bits (885), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 176/344 (51%), Positives = 228/344 (66%), Gaps = 2/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD+D + +S K +P W + A+ L+ E L + + L D Sbjct: 2 ALGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKLIDETNQLKTKRDRFDTLTNELDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LEL E+ D + E ++K +++ Q LL+G+ D N+A LE+H GAGGT Sbjct: 62 LKVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +MLLRMYTRWAE FK + L+ GE AGI S ++LI G NAYG+L+ E+GVH Sbjct: 122 EAQDWGSMLLRMYTRWAETHDFKVDVLDYQVGEVAGINSVSILINGENAYGYLRSEKGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS RRHTSF+S+ V P +DD + I+IS + ++D YRASGAGGQHVN T S Sbjct: 182 RLVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307 AVRITHIPTG+VV Q +RSQ +N+ A NML++KLYELE QK+ EE A I E + +IG Sbjct: 242 AVRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKI-EGEQLDIG 300 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV PY MVKD RTN E + + V+DGDLD F+ A L Sbjct: 301 WGSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYL 344 >gi|121535512|ref|ZP_01667321.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1] gi|121305931|gb|EAX46864.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1] Length = 332 Score = 345 bits (885), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 169/326 (51%), Positives = 230/326 (70%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K P W + EA+ + +E L ++IS ++++ R D L +L ++E D S+ Sbjct: 1 MEHKMSAPDFWDDPAEAQKIAQEVTALKDSISQYQQLRSRHSDVAALWQLGMDEGDDSVY 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L+ + ++E + LL+GE D+N+A L +HAGAGGTE+QDWA MLLRMY RWA Sbjct: 61 DEVAAELRALAKDLEQLELTVLLTGEYDANNAILTLHAGAGGTEAQDWAQMLLRMYMRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EKR +K E L+ GEEAGIKSAT+ + G NAYG+LK E+GVHRLVRISP+D++ RRHTS Sbjct: 121 EKRGYKVELLDALAGEEAGIKSATITVAGRNAYGYLKAEKGVHRLVRISPFDASGRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P +DD+ EI I+ +D +IDT+R+ GAGGQHVN T+SAVRITH+PTG+VVQCQ Sbjct: 181 FAAVDVMPEIDDNTEIVINPADLKIDTFRSGGAGGQHVNKTESAVRITHLPTGIVVQCQS 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ +N+ QA +LRAKL+ELE QKRE+ + I WG QIRSYV PY +VKD Sbjct: 241 ERSQIQNREQAMRLLRAKLFELERQKREQKKSELAGDYQAIEWGSQIRSYVFHPYNLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RTN E + V+DG++D F++A L Sbjct: 301 HRTNAETGNVQAVMDGEIDLFIEAYL 326 >gi|56416847|ref|YP_153921.1| peptide chain release factor 2 [Anaplasma marginale str. St. Maries] gi|56388079|gb|AAV86666.1| peptide chain release factor 2 [Anaplasma marginale str. St. Maries] Length = 338 Score = 345 bits (885), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 172/330 (52%), Positives = 227/330 (68%), Gaps = 2/330 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+++ LW + AK L+ ER ++ ++ + ++ + + LL+LA +E D L Sbjct: 4 LDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDLA-DESDSEFL 62 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 L +++ V K+ E + SGEAD + +L + GAGGTES DWA MLLRMY RWA Sbjct: 63 DGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVRWA 122 Query: 146 EK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 F TE ++ DGE AG+KS T+ I G AYGW K E GVHRLVRISP+DS+SRRHT Sbjct: 123 GTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHT 182 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ Sbjct: 183 SFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQ 242 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 RSQH+N+A+A+++LR++LYE+ELQ++E+ S+ +IGWG QIRSYV+ PY+MVK Sbjct: 243 TSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVK 302 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 DLRT E VLDGDLD F+ A L K Sbjct: 303 DLRTGHETGDVDAVLDGDLDKFIAAALTYK 332 >gi|303252568|ref|ZP_07338731.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247319|ref|ZP_07529367.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648536|gb|EFL78729.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856163|gb|EFM88318.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 347 Score = 345 bits (885), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 173/342 (50%), Positives = 240/342 (70%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ I+ + + D Sbjct: 3 FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+E +D E ++ ++ +F+ + SG+ D+ D Y+++ AG+GGTE Sbjct: 63 EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+HR Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+ +VVQCQ RSQH+NK Q L+AKLYE+E+ K+ E SK++IGWG Sbjct: 243 VRITHIPSDIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 303 SQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 343 >gi|325981471|ref|YP_004293873.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212] gi|325530990|gb|ADZ25711.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212] Length = 368 Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 171/339 (50%), Positives = 238/339 (70%), Gaps = 1/339 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 D+D+ RL+ L ED +W + + + RE++ L++ + + ++ +L D L Sbjct: 26 FLDFDSKQTRLNELTRLLEDSTVWSDSKRTQEIGREKKSLEDTVVTLVSMEKQLGDAKEL 85 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++A +E D + L S + + I+ + +F + SG DSN+ ++++ +G+GGTE+QD Sbjct: 86 FQIAKDEADEAALVSISLDAENIEKAIANLEFRRMFSGPMDSNNCFVDIQSGSGGTEAQD 145 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML RMY R+ E++ F E LE G+ AGIKSATL I G AYG+L+ E GVHRLVR Sbjct: 146 WAAMLERMYLRYCERQGFDVEILEESPGDIAGIKSATLKISGEYAYGFLRTETGVHRLVR 205 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D RIDT+RASGAGGQH+N TDSA+RI Sbjct: 206 KSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRIDTFRASGAGGQHINKTDSAIRI 265 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH PTG+VVQCQ RSQH+NKA A ML+++L+E EL+KR E E +KT+IGWG QI Sbjct: 266 THNPTGIVVQCQSGRSQHRNKADALTMLKSRLFEAELRKRNEEKQAIEENKTDIGWGHQI 325 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYVL + +KDLRTN+E + +VLDGDL+ F++A+L Sbjct: 326 RSYVLDQSR-IKDLRTNVEVGNTQNVLDGDLNSFIEASL 363 >gi|258517064|ref|YP_003193286.1| peptide chain release factor 2 [Desulfotomaculum acetoxidans DSM 771] gi|257780769|gb|ACV64663.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfotomaculum acetoxidans DSM 771] Length = 366 Score = 345 bits (884), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 169/320 (52%), Positives = 228/320 (71%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ + R++ L +++S E++ L D +L ELA EEDD L+ET+ +L Sbjct: 42 PGFWDDQAQAQKISRQQAVLKDSVSLYGELRQSLEDLEVLAELAQEEDDDIALRETAKDL 101 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++++L V + + LLSGE D +A + +HAGAGGTE+QDW MLLRM+TRWAE +++ Sbjct: 102 KQLELRVSELELDVLLSGEYDRGNAIISLHAGAGGTEAQDWVEMLLRMFTRWAEDHRYRV 161 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 L++ G+EAGIKS T+ I GPNA+G+LK E+GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 162 IVLDMLSGDEAGIKSVTVEIVGPNAFGYLKSEKGVHRLVRISPFDTAGRRHTSFASVEVL 221 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P VD+ ++IEI D +IDT+RA GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ N Sbjct: 222 PEVDEDVDIEIKTEDLKIDTFRAGGAGGQHVNKTDSAVRITHLPTGIVVSCQNERSQLSN 281 Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 + A +L+AKL ELELQK+E E+A++ EI WG QIRSYV PY +VKD RT E Sbjct: 282 RNSAMKLLKAKLAELELQKKEAEMASL-RGDHQEIAWGSQIRSYVFHPYSLVKDHRTGAE 340 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V++G+LD FM A L Sbjct: 341 TGNIEAVMNGELDKFMAAFL 360 >gi|291276501|ref|YP_003516273.1| peptide chain release factor 2 [Helicobacter mustelae 12198] gi|290963695|emb|CBG39527.1| peptide chain release factor 2 [Helicobacter mustelae 12198] Length = 365 Score = 344 bits (883), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 168/353 (47%), Positives = 239/353 (67%), Gaps = 6/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ + + D +RL + +DP+ W + A + +E+ ++ ++ + Sbjct: 13 LKTKVDSIHKIIKPDTLKERLCEIEKLQQDPNFWNDAKRAGEIGKEKSKIERMLATYQNA 72 Query: 63 QDRLCDNLILLELALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L E++ + D +L S NL++ E++ + E +LSGE D +A + + Sbjct: 73 KNSIDDARELFEISANDTDTLELLFAESQNLEQ---EIKKVEIEVMLSGEHDGANAIVTI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTESQDW ++L RMY RW E+R FK E L+ DGEEAGIK L+KG NAYG++ Sbjct: 130 QPGAGGTESQDWGSILYRMYLRWCERRGFKAEILDYQDGEEAGIKGVAFLVKGENAYGYM 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR SP+D+N++RHTSF+S+ V P +DD+IEI+I E D RIDTYRASGAGGQ Sbjct: 190 KTESGVHRLVRNSPFDANTKRHTSFASVQVSPELDDNIEIDIEEKDLRIDTYRASGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T+SA+RITH+PTG+VVQCQ +RSQHKNKA A ML++KLYELE +K+ +++ Sbjct: 250 HINKTESAIRITHLPTGIVVQCQNDRSQHKNKASALKMLQSKLYELEREKQN--SSVATQ 307 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 308 EKSEIGWGHQIRSYVLSPYQQVKDNRSNIAYSNVEAILDGDIDSIIEGVLISK 360 >gi|45443320|ref|NP_994859.1| peptide chain release factor 2 [Yersinia pestis biovar Microtus str. 91001] gi|108806377|ref|YP_650293.1| peptide chain release factor 2 [Yersinia pestis Antiqua] gi|108813248|ref|YP_649015.1| peptide chain release factor 2 [Yersinia pestis Nepal516] gi|145597933|ref|YP_001162009.1| peptide chain release factor 2 [Yersinia pestis Pestoides F] gi|170023172|ref|YP_001719677.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII] gi|186896595|ref|YP_001873707.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+] gi|270487483|ref|ZP_06204557.1| peptide chain release factor 2 [Yersinia pestis KIM D27] gi|294502944|ref|YP_003567006.1| peptide chain release factor RF-2 [Yersinia pestis Z176003] gi|21960210|gb|AAM86823.1|AE013928_8 peptide chain release factor RF-2 [Yersinia pestis KIM 10] gi|45438189|gb|AAS63736.1| peptide chain release factor RF-2 [Yersinia pestis biovar Microtus str. 91001] gi|108776896|gb|ABG19415.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis Nepal516] gi|108778290|gb|ABG12348.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis Antiqua] gi|145209629|gb|ABP39036.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis Pestoides F] gi|169749706|gb|ACA67224.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII] gi|186699621|gb|ACC90250.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+] gi|262360979|gb|ACY57700.1| peptide chain release factor RF-2 [Yersinia pestis D106004] gi|262364919|gb|ACY61476.1| peptide chain release factor RF-2 [Yersinia pestis D182038] gi|270335987|gb|EFA46764.1| peptide chain release factor 2 [Yersinia pestis KIM D27] gi|294353403|gb|ADE63744.1| peptide chain release factor RF-2 [Yersinia pestis Z176003] Length = 310 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 172/307 (56%), Positives = 221/307 (71%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ ++ I +++ L D LLELA+E DD ET L+ + ++ +F Sbjct: 1 MGKERSTLEEIVTTIDQLEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE D + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG Sbjct: 61 RRMFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 121 LKSATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE E+QK+ + E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 KFIEASL 306 >gi|161506411|ref|YP_001573523.1| hypothetical protein SARI_04609 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867758|gb|ABX24381.1| hypothetical protein SARI_04609 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 293 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 169/280 (60%), Positives = 207/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1] gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1] Length = 375 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 170/321 (52%), Positives = 237/321 (73%), Gaps = 3/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-NLILLELALEEDDCSILQETSD 90 +P W + +AK + ++R+ L + ++ ++ R+ D + ++ EL E+ D ++L S+ Sbjct: 40 EPDFWSDQEKAKSISQKRKALQDKLNTYTSLKSRIKDLDEMVSELKEEDLDTTLL--ISE 97 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L+ ++ +++ + E+ LS E D N+AYL + AGAGGTE+ DWA+MLLRMYTRWAEK + Sbjct: 98 ELEAVEKDLKKFELETYLSDEMDINNAYLTIQAGAGGTEACDWASMLLRMYTRWAEKHGY 157 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + + +I+ + AGIKSATL IKGP AYG+LK E GVHRLVRISP+D+N+RRHTSF+S+ Sbjct: 158 EVQLTDINPDDVAGIKSATLYIKGPYAYGYLKSENGVHRLVRISPFDANARRHTSFASVL 217 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P V++ + IEI E D RIDTYRASGAGGQ+VN TD+AVRITHIPTG+VV CQQERSQ Sbjct: 218 VVPEVNEDVNIEIKEEDLRIDTYRASGAGGQYVNKTDTAVRITHIPTGIVVACQQERSQI 277 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ +A ML+A+LY+LELQK EE E KT+IGWG +IRSY+ QP Q+VKDLRT Sbjct: 278 QNRRKAMEMLKARLYQLELQKIEEKKKSLEGPKTDIGWGYKIRSYIFQPSQLVKDLRTGE 337 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DG++D+F++A L Sbjct: 338 ESGNIEAVMDGEIDNFIEAYL 358 >gi|291326803|ref|ZP_06125920.2| peptide chain release factor 2 [Providencia rettgeri DSM 1131] gi|291312658|gb|EFE53111.1| peptide chain release factor 2 [Providencia rettgeri DSM 1131] Length = 320 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 176/317 (55%), Positives = 226/317 (71%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W A+ L +ER L+ + I ++ L D LLELA+E DD E L++ Sbjct: 1 MWNEPERAQALGKERSSLEAIVETIDQMTQGLEDVEGLLELAVEADDEDTFNEAEAELEQ 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++E +F + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE Sbjct: 61 LEGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEI 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP Sbjct: 121 IEESDGDVAGLKSATVKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK Sbjct: 181 VDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA L+AKLYELE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 241 QAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 300 TQAVLDGDLDKFIEASL 316 >gi|157363562|ref|YP_001470329.1| peptide chain release factor 2 [Thermotoga lettingae TMO] gi|166977374|sp|A8F531|RF2_THELT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157314166|gb|ABV33265.1| peptide chain release factor 2 [Thermotoga lettingae TMO] Length = 367 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 173/339 (51%), Positives = 232/339 (68%), Gaps = 2/339 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L D D L + ++ DP +W++ +A + ++ + + +S I EI+ D + Sbjct: 23 LIDPDKLNMELKKMESEMSDPEIWKDQRKAGEISKKVRRIKELLSDISEIERNFEDIDVG 82 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +EL+ E+D I Q+ +Q ++ + Q E +L+ D N+AYL +H GAGGTES D Sbjct: 83 IELS--EEDPGIAQDIEKIVQEVEKNIRRFQLELILNDPLDQNNAYLSIHPGAGGTESHD 140 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMY RWAE++ F E L+ GEEAG+KSAT+L+KG AYG+LK E+GVHRLVR Sbjct: 141 WAQMLLRMYMRWAERKGFIVELLDFQPGEEAGLKSATILVKGEYAYGYLKHERGVHRLVR 200 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ RRHTSF+S+ V P + D I++EI D RIDT+RASG GGQ+VN TDSAVRI Sbjct: 201 ISPFDAAKRRHTSFASVNVVPEISDDIDVEIKPEDIRIDTFRASGHGGQYVNRTDSAVRI 260 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VV CQ ERSQH+NKA A +L+AKLY+LEL KR E + + EI WG QI Sbjct: 261 THLPTGIVVSCQSERSQHQNKALAMKVLKAKLYQLELAKRREQLDEIQGELKEISWGNQI 320 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSY+LQPY +VKD RT+IE + VLDG+LD F++A L Sbjct: 321 RSYILQPYTLVKDHRTDIETGNFDAVLDGELDQFIEAEL 359 >gi|121595079|ref|YP_986975.1| peptide chain release factor 2 [Acidovorax sp. JS42] gi|222111422|ref|YP_002553686.1| hypothetical protein Dtpsy_2248 [Acidovorax ebreus TPSY] gi|229576664|sp|A1W9H4|RF2_ACISJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790913|sp|B9MBK7|RF2_DIAST RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|120607159|gb|ABM42899.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax sp. JS42] gi|221730866|gb|ACM33686.1| conserved hypothetical protein [Acidovorax ebreus TPSY] Length = 367 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 169/338 (50%), Positives = 236/338 (69%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +RL +N EDP +W + +A+ L +E++ LD + ++++ L DN L Sbjct: 27 LDYDAKFERLRTVNASLEDPAVWNDPKKAQELGKEKKSLDAVVLTLQKLTTELADNAELY 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E++ EE D + L ++++ +E +F + S EAD + ++++ AGAGGTE+ DW Sbjct: 87 EMSKEEGDEAGLTTIEAEAEKLRPLIEELEFRRMFSNEADPLNCFVDIQAGAGGTEACDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLR Y ++AE++ FK E G+ AGIKSAT+ I+G AYG L+ E GVHRLVR Sbjct: 147 ASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKIEGEYAYGLLRTETGVHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS+ RHTSF+S++VYP +DDSIEI I+ SD R DTYRASGAGGQH+N TDSAVR+T Sbjct: 207 SPFDSSGGRHTSFASLFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVRLT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E E +KT++GWG QIR Sbjct: 267 HIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDTKTDVGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 327 SYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363 >gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense SS-5] Length = 369 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 177/326 (54%), Positives = 231/326 (70%), Gaps = 6/326 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLILLELALEEDDCSILQET 88 DP+ W + +A+ + R +L + I + ++ L D + LLE+ E+D + E Sbjct: 42 DPNFWNDTKKAQEISSRRNYLGEKLEEILTVDEKINNLLDYITLLEM---EEDQELYNEV 98 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 L+ I+ E+ + SLLS E DS +A L V AG+GG E+ DW MLLRMYTRWAEKR Sbjct: 99 EKELKEIEKEISRLELGSLLSDEMDSKNAILTVQAGSGGVEACDWTEMLLRMYTRWAEKR 158 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 ++ E ++ + AG+KSAT++IKGP AYG+LKGEQGVHRLVRISP+D+N RRHTSFS+ Sbjct: 159 GYQVELVDFQPDDVAGVKSATVIIKGPYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSA 218 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +D+ I++EI+E D RIDTYRA GAGGQHVN TDSAVRITHIPTG+VV CQ ERS Sbjct: 219 VSVIPEIDEDIKVEINEEDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVVACQSERS 278 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +NK +A NML+AKLY+LEL+KR+E E K +I WG QIRSYV QPYQMVKDLRT Sbjct: 279 QLQNKLKAMNMLKAKLYQLELEKRKEKQKELEGEKKDITWGSQIRSYVFQPYQMVKDLRT 338 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++DDF+++ L K Sbjct: 339 GFETGNIEAVMDGEIDDFIESYLKWK 364 >gi|238020780|ref|ZP_04601206.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147] gi|237867760|gb|EEP68766.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147] Length = 367 Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 168/338 (49%), Positives = 237/338 (70%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ +RL + +EDP LW + A+ + +ER+ L+ + + I++ + DN L+ Sbjct: 27 MDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIENGIADNRELI 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++ +EE+D ++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 87 DMVVEENDADGFAAIVADVAALEQQMADLEFKRMFNQPADPNNCFVDITAGAGGTEAEDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTR+AE++ FK E +E DGE AGI +ATL I+G AYG L+ E GVHRLVR Sbjct: 147 AGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLRTETGVHRLVRY 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH+N TDSAVRIT Sbjct: 207 SPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQHINKTDSAVRIT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+PTG+VVQ Q RSQH+N+ MLRAKL+ELE++KR E E K+++GWG QIR Sbjct: 267 HLPTGIVVQSQSSRSQHENRRIVMEMLRAKLFELEMRKRNEEKQALEEGKSDVGWGSQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|227513676|ref|ZP_03943725.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577] gi|227524821|ref|ZP_03954870.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290] gi|227083087|gb|EEI18399.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577] gi|227088036|gb|EEI23348.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290] Length = 354 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 175/344 (50%), Positives = 227/344 (65%), Gaps = 2/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD+D + +S K +P W + A+ ++ E L + L D Sbjct: 2 ALGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKMIDETNQLKTKRDRFNTLTKELDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LEL E+ D + E ++K +++ Q LL+G+ D N+A LE+H GAGGT Sbjct: 62 LKVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +MLLRMYTRWAE FK + L+ GE AGI S ++LI G NAYG+L+ E+GVH Sbjct: 122 EAQDWGSMLLRMYTRWAESHNFKVDVLDYQVGEVAGINSVSILISGENAYGYLRSEKGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS RRHTSF+S+ V P +DD + I+IS + ++D YRASGAGGQHVN T S Sbjct: 182 RLVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307 AVRITHIPTG+VV Q +RSQ +N+ A NML++KLYELE QK+ EE A I E + +IG Sbjct: 242 AVRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKI-EGEQLDIG 300 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV PY MVKD RTN E + + V+DGDLD F+ A L Sbjct: 301 WGSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYL 344 >gi|57239093|ref|YP_180229.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Welgevonden] gi|57161172|emb|CAH58086.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Welgevonden] Length = 367 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 178/355 (50%), Positives = 245/355 (69%), Gaps = 2/355 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L++ L + G D DN L LNTK D LW + + A ++ ER + + Sbjct: 12 VNLNKALQLIRGYLDIDNLTSLLVDLNTKCADTSLWNDNLTAHHVLSERARISKIVGLFT 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+++ LL + + D S+L + S L+ +K +V+ K+ E L S EAD ND ++E Sbjct: 72 ELEEEYQYYNELLSV-ISNDSDSLLDDLSKGLEALKEKVKKKEVECLFSDEADQNDCFIE 130 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGGTES DW+NMLLRMY RWAE FKT+ + DGEE G+KSA + + G NAYG Sbjct: 131 IQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGVKSAIIKVIGYNAYG 190 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 W K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I + D RIDTYRASGAG Sbjct: 191 WSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHDKDLRIDTYRASGAG 250 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T+SAVRITHIP+G+VVQCQ RSQH+N +A+N+LR++LY+L+LQ++E+ Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLYQLKLQEKEKKMAQE 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S + +IGWG QIRSYV+ PYQMVKD+RT E + + VLDGDLD F+ ATL K Sbjct: 311 HSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDAFIIATLTKK 365 >gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782] gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782] Length = 373 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 171/331 (51%), Positives = 233/331 (70%), Gaps = 2/331 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K +P W ++ ++ ++++ + L I I + D L EL LEE D S++ Sbjct: 37 LEHKASEPEFWNDMENSQKILQKTKILKTKIDRFNNITSQWEDLFTLSELGLEEQDESVI 96 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + LQ +K +E + E+LL+G D N+A L +HAGAGGTE+QDW MLLRM+TRW Sbjct: 97 PEVGEGLQLLKHNLEALRLETLLTGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFTRWG 156 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + ++ + L+ DG+EAGIKS T+ + G NAYG+LK E+GVHRLVRISP+DS+ RRHTS Sbjct: 157 EAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLKSEKGVHRLVRISPFDSSGRRHTS 216 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S V P +DD+IEI I+ D R+DTYRASGAGGQH+N TDSA+RITHIPTGVVV CQ Sbjct: 217 FASADVMPELDDTIEININPDDLRVDTYRASGAGGQHINKTDSAIRITHIPTGVVVSCQT 276 Query: 266 ERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ +NK A ML+AKL+EL E +++E+I ++ + + EI WG QIRSYV PY +VK Sbjct: 277 ERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDL-KGVQMEIAWGSQIRSYVFCPYTLVK 335 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 D RTN E+ + V+DG+LD F+ A L+++K Sbjct: 336 DHRTNYEEGNVDAVMDGELDGFINAYLSMEK 366 >gi|148549433|ref|YP_001269535.1| peptide chain release factor 2 [Pseudomonas putida F1] gi|148513491|gb|ABQ80351.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas putida F1] Length = 304 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 166/300 (55%), Positives = 220/300 (73%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + ++ L D LL++A+EE+D + + + L+ ++ + +F + SGE Sbjct: 2 LAQVVETLDKLSGGLADCKDLLDMAVEENDENAVSDVVTELEGLEENLAQLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ Sbjct: 62 MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EI+I+ SD RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPSDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E SK++IGWG QIRSYVL + +KDLRT +E++ VLDGDLD +++A+L Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDQYLEASL 300 >gi|167748494|ref|ZP_02420621.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662] gi|317471975|ref|ZP_07931307.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA] gi|167652486|gb|EDR96615.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662] gi|316900379|gb|EFV22361.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA] Length = 367 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 181/347 (52%), Positives = 239/347 (68%), Gaps = 2/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L G + +R+ L E P W+++ E++ ++RE + L + + + ++ + Sbjct: 18 LEKLSGSLGLEEKKERIEQLELDMEAPGFWEDLEESQKVVREVKGLKDQVEGYEGLKGQF 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L+E+A EE+D + ET + + E + +LLSGE D N+A L +HAGAG Sbjct: 78 EDIETLIEMASEEEDEELAAETQEAFAEFETAYENLRISTLLSGEYDKNNAILSLHAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA ML RMYTRWA K+ F+T+ ++ DG+EAGIKS T+ IKG NAYG+L+ E+G Sbjct: 138 GTESCDWAGMLYRMYTRWAGKKGFETKVIDYLDGDEAGIKSVTVEIKGENAYGYLRSERG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+++ +R TSF+S V P +D+ + +EI++ D RIDTYRASGAGGQH+N T Sbjct: 198 VHRLVRISPFNAAGKRQTSFASCDVMPEIDEDLNVEIADEDIRIDTYRASGAGGQHINKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTE 305 DSA+RITHIPTG+VVQCQ ERSQHKNK QA ML+ KLY L E Q E++++I + Sbjct: 258 DSAIRITHIPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKEQQHLEKLSDI-RGDVGD 316 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVLQPY MVKD RTN E +PS VLDGDLD FM A LA Sbjct: 317 NGWGSQIRSYVLQPYTMVKDHRTNKESGNPSAVLDGDLDGFMNAYLA 363 >gi|329296879|ref|ZP_08254215.1| peptide chain release factor 1 [Plautia stali symbiont] Length = 293 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 170/290 (58%), Positives = 214/290 (73%), Gaps = 1/290 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q L D LLELA+E DD E L + +++ +F + SGE DS D Y+++ Sbjct: 1 MQQGLEDVQGLLELAVEADDEETFNEAVVELDALDVKLGELEFRRMFSGEYDSADCYMDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AG KSAT+ I G AYGWL Sbjct: 61 QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGTKSATIKIIGDYAYGWL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS+++YP VDDSI+IEI+ +D RID YRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDSIDIEINPADLRIDVYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ E Sbjct: 181 HVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQAAEE 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 241 NKSDIGWGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 289 >gi|269958738|ref|YP_003328525.1| peptide chain release factor 2 [Anaplasma centrale str. Israel] gi|269848567|gb|ACZ49211.1| peptide chain release factor 2 [Anaplasma centrale str. Israel] Length = 338 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 171/330 (51%), Positives = 227/330 (68%), Gaps = 2/330 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+++ LW + AK L+ ER ++ ++ + ++ + + LL++A +E D L Sbjct: 4 LDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVA-DESDSEFL 62 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 L +++ V K+ E + SGEAD + +L + GAGGTES DWA MLLRMY RWA Sbjct: 63 DGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVRWA 122 Query: 146 EK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 F TE ++ DGE AG+KS T+ I G AYGW K E GVHRLVRISP+DS+SRRHT Sbjct: 123 GTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHT 182 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ Sbjct: 183 SFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQ 242 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 RSQH+N+A+A+++LR++LYE+ELQ++E+ S+ +IGWG QIRSYV+ PY+MVK Sbjct: 243 TSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVK 302 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 DLRT E VLDGDLD F+ A L K Sbjct: 303 DLRTGHETGDVDAVLDGDLDKFIAAALTYK 332 >gi|167626878|ref|YP_001677378.1| peptide chain release factor 2 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596879|gb|ABZ86877.1| peptide chain release factor 2 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 346 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 178/345 (51%), Positives = 243/345 (70%), Gaps = 3/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 +N G +FD+D +RL+ + + ED +W N A+ L R++ L+N + + I + L Sbjct: 1 MNLYGTIFDYDVKKERLTEVLMELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 LLELA E+ S++QE + + Q + E+E +F + SG+ D N+A+L++ +G+G Sbjct: 61 ETLTELLELAEED--ESLMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSG 118 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML+RMY RWA+ FK ++ DG+ AGIK TL ++G AYGWL+ E G Sbjct: 119 GTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN T Sbjct: 179 IHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPT +VVQ Q +RSQHKN+ A L++KLYE+ELQKR N E SK +I Sbjct: 239 DSAVRITHIPTNIVVQSQSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADI 298 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT +E T+ VLDGDLD F++A+L Sbjct: 299 GWGSQIRSYVLDQSR-IKDLRTGVENTNTQAVLDGDLDKFIEASL 342 >gi|307546434|ref|YP_003898913.1| peptide chain release factor 2 [Halomonas elongata DSM 2581] gi|307218458|emb|CBV43728.1| peptide chain release factor 2 [Halomonas elongata DSM 2581] Length = 301 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 168/296 (56%), Positives = 215/296 (72%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I ++ L DN LLELA E+D + E S L+ ++ ++E +F + +GE D N Sbjct: 3 VDTIDTLERGLNDNRDLLELAEMEEDADTVDEVSRELESLRADLEKLEFRRMFAGEMDPN 62 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +AYL++ AG+GGTE+QDWANMLLRMY RWAE FK + +E+ GE AGIKSAT+ I+G Sbjct: 63 NAYLDIQAGSGGTEAQDWANMLLRMYLRWAEHHGFKADLIELSAGEVAGIKSATVHIQGE 122 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS RRHTSF+S+++ P VDDS E+EI+ SD R+DTYR+ Sbjct: 123 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFEVEINPSDLRVDTYRS 182 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTTDSAVRITH PTG+VV CQ +RSQH N+ A LRAKL+E E+ KR Sbjct: 183 SGAGGQHVNTTDSAVRITHEPTGIVVACQSQRSQHANRDFAMKQLRAKLWEHEMDKRNAA 242 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E SK +IGWG QIRSYVL Q +KDLRT ++ +S VLDGDLD F++A+L Sbjct: 243 KQAAEDSKADIGWGSQIRSYVLDD-QRIKDLRTGVQSSSCEKVLDGDLDQFIEASL 297 >gi|328952688|ref|YP_004370022.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM 11109] gi|328453012|gb|AEB08841.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM 11109] Length = 369 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 170/349 (48%), Positives = 243/349 (69%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++ + L G D + RL+ + P WQN ++ +++ER L + ++ +E Sbjct: 15 LSQRYSQLRGRLDLEKKKARLAEIEVLAAKPDFWQNSSQSSQILKERGALTHLLTVWQEQ 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D +LLELA EE D + +L+ + ++ + E LL GE D DA + +H Sbjct: 75 GKKIEDLEVLLELAQEETDEQAFVDVLTDLKVQERALQQLELEMLLGGEDDDKDAIITIH 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA MLLRMY R+AE++ F+TE ++ G+EAG+KS+T + GP+AYG+LK Sbjct: 135 AGAGGTEAQDWAEMLLRMYLRFAERQGFRTEIYDLLPGDEAGVKSSTFAVSGPHAYGYLK 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+D++ RRHTSF++++VYP D+ I+I++ E D RIDT+RASGAGGQH Sbjct: 195 SESGIHRLVRISPFDASGRRHTSFAAVFVYPEADEDIQIDLQEKDLRIDTFRASGAGGQH 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVR+THIPTG+VV Q ERSQH+N+ A +L+++LYELE KR+E A + + Sbjct: 255 VNKTSSAVRLTHIPTGIVVSMQNERSQHRNRELAMRVLKSRLYELEKSKRQEKAQVVLDA 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +I WG QIRSYVLQPY+++KD RT E+ + VLDGDLD F++A L Sbjct: 315 QKDIAWGSQIRSYVLQPYRLIKDHRTKHEEGNVEAVLDGDLDAFIEAYL 363 >gi|300781808|ref|YP_003778203.1| hypothetical protein PSPTO_1500 [Pseudomonas syringae pv. tomato str. DC3000] gi|290758052|gb|ADD53002.1| protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 293 Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 164/286 (57%), Positives = 216/286 (75%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ AG+ Sbjct: 5 LVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQAGS 64 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ E Sbjct: 65 GGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEI 124 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNT Sbjct: 125 GVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNT 184 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E +K++ Sbjct: 185 TDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSD 244 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IGWG QIRSYVL + +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 245 IGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 289 >gi|238754561|ref|ZP_04615915.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473] gi|238707192|gb|EEP99555.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473] Length = 310 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 172/307 (56%), Positives = 220/307 (71%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ ++ I E+ L D LLELA+E DD E L+ + ++ +F Sbjct: 1 MGKERSSLEEIVTTIDELAQGLEDVSGLLELAIEADDEETFDEAVAELEILDGKLGQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG Sbjct: 61 RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 121 LKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE E+QK+ + E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD Sbjct: 241 YEFEMQKKNADKQMLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 KFIEASL 306 >gi|229916623|ref|YP_002885269.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b] gi|259585245|sp|C4L5K9|RF2_EXISA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229468052|gb|ACQ69824.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b] Length = 366 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 174/330 (52%), Positives = 228/330 (69%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R++ L + P W N +A+ ++ E L + +++ ++ D + LEL EE D Sbjct: 32 RIAELENEMTYPDFWDNQEKAQKVIDESNGLKAMVDKYQDLANQHEDGEVTLELIKEEPD 91 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + +E +++Q +K E + + E LL+G D+N+A LE+H GAGGTESQDWA+MLLRMY Sbjct: 92 AEMQEELGESIQALKKEFDDFELEILLNGPYDANNAILELHPGAGGTESQDWASMLLRMY 151 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+A+K+ +K E ++ GEEAG+KS TL I G NAYG+LK E+G+HRLVRISP+DS+ R Sbjct: 152 QRFADKQGWKVETVDYLPGEEAGVKSVTLRIVGHNAYGYLKAEKGIHRLVRISPFDSSGR 211 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S V P DD IEIE+ D RIDTYRASGAGGQH+NTTDSAVRITH+PTGVVV Sbjct: 212 RHTSFVSCDVMPEFDDDIEIEVRTEDLRIDTYRASGAGGQHINTTDSAVRITHVPTGVVV 271 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ A ML+AKLY+ EL +++ + KT+IGWG QIRSYV PY Sbjct: 272 SCQTERSQIKNRESAMKMLKAKLYQRELDEQQRKLDEIRGEKTDIGWGSQIRSYVFHPYS 331 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E + S V+DGD+ F+ A L Sbjct: 332 MVKDHRTNYEVGNTSGVMDGDVMPFIDAYL 361 >gi|308535208|ref|YP_002137819.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem] gi|308052553|gb|ACH38023.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem] Length = 371 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 170/347 (48%), Positives = 236/347 (68%), Gaps = 1/347 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +++ L G + D+ +R+ L T P W + A+ ++R R ++ ++ + Sbjct: 11 ELTERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTTWES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL EE D + L E + +++ V +F +LSG D++ A++ + Sbjct: 71 LDKQARDIKELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTESQDWA MLLRMY R+ EK+ +KTE + +G+ AG+K T + G AYG+L Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-SDCRIDTYRASGAGG 240 K E G+HRLVRISP+DS++RRHTSF+S +V+PV+++ SD RIDTYR+SGAGG Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEEDIEIKIAESDLRIDTYRSSGAGG 250 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A +LR+KLYE+EL++RE A+ Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG LDDF+ Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGSLDDFV 357 >gi|183599838|ref|ZP_02961331.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827] gi|188022110|gb|EDU60150.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827] Length = 293 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 210/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E + L +++ ++E +F + SGE DS D Y+++ AG+GGTE+Q Sbjct: 11 LLELAIEADDEDTFNEAGEELTQLQAKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE + FKTE +E DG+ AG+KSAT+ + G AYGWL+ E GVHRLV Sbjct: 71 DWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKVIGDYAYGWLRTESGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPT +V QCQ +RSQHKNK QA L+AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 251 IRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 289 >gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1 BON] gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1 BON] Length = 353 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 175/347 (50%), Positives = 237/347 (68%), Gaps = 8/347 (2%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD + + L + DP W ++ ++ + + + L + + ++ ++ + D Sbjct: 4 GLLFDPAGMEEEIKNLEKQMADPSFWSDMERSQKVNQRIKALKDKLQNLRAVEQKWEDLR 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L +L EEDD SI+ E + L ++ EVE + E+LLSG D N+A + +HAGAGGTE+ Sbjct: 64 TLADLGREEDDASIVGEVAAELASLRKEVERLRIETLLSGPYDRNNAIVTLHAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ML RMYTRWAE + +K E L++ +G+EAGIKS T L++G NAYG+LK E+GVHRL Sbjct: 124 QDWVQMLYRMYTRWAEDKGYKVEVLDLLEGDEAGIKSVTFLVEGENAYGYLKAEKGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+ RRHTSF+S+ V P +DD +EI+ D +IDTYR+SGAGGQHVN T+SA+ Sbjct: 184 VRISPFDAAGRRHTSFASVDVMPELDDDEGVEINPEDLKIDTYRSSGAGGQHVNKTESAI 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI----GESSKTEI 306 RITHIPTG+VVQCQ ERSQH NK A ML+AKL LEL+++EE A I GE + E Sbjct: 244 RITHIPTGIVVQCQNERSQHSNKETAMKMLKAKL--LELKEQEEQAKISDIKGELKRIE- 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSY+ QPY MVKD RTN E + + V+DGD+D F+ L + Sbjct: 301 -WGSQIRSYIFQPYTMVKDHRTNAEIGNVNAVMDGDIDLFISEYLKM 346 >gi|238752991|ref|ZP_04614450.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380] gi|238708779|gb|EEQ01038.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380] Length = 310 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 172/307 (56%), Positives = 219/307 (71%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ ++ I ++ + D LLELA+E DD E L + ++ +F Sbjct: 1 MGKERSALEEIVTTIDQLDQGMEDVSGLLELAIEADDEETFNEAIAELDILDGKLGQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG Sbjct: 61 RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 121 IKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE E+QK+ + E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 KFIEASL 306 >gi|222475212|ref|YP_002563628.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Florida] gi|255003190|ref|ZP_05278154.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Puerto Rico] gi|222419349|gb|ACM49372.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Florida] Length = 338 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 171/330 (51%), Positives = 227/330 (68%), Gaps = 2/330 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+++ LW + AK L+ ER ++ ++ + ++ + + LL++A +E D L Sbjct: 4 LDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVA-DESDSEFL 62 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 L +++ V K+ E + SGEAD + +L + GAGGTES DWA MLLRMY RWA Sbjct: 63 DGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIRWA 122 Query: 146 EK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 F TE ++ DGE AG+KS T+ I G AYGW K E GVHRLVRISP+DS+SRRHT Sbjct: 123 GTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHT 182 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ Sbjct: 183 SFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQ 242 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 RSQH+N+A+A+++LR++LYE+ELQ++E+ S+ +IGWG QIRSYV+ PY+MVK Sbjct: 243 TSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVK 302 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 DLRT E VLDGDLD F+ A L K Sbjct: 303 DLRTGHETGDVDAVLDGDLDKFIAAALTYK 332 >gi|304386240|ref|ZP_07368573.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM 20284] gi|304327597|gb|EFL94824.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM 20284] Length = 362 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 175/342 (51%), Positives = 229/342 (66%), Gaps = 2/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GGLFD D + +S K +P W + +A+ ++ E L K + D + + Sbjct: 12 GGLFDLDALNESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLE 71 Query: 71 ILLELALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + LEL E D + E D L Q KL +Y+ LL+G+ D+N+A LE+H GAGGTE Sbjct: 72 VTLELLEMEADPDVQAEFEDELSQTAKLLRDYR-LGLLLNGKYDANNAILEIHPGAGGTE 130 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDW +MLLRMYTRWAE+ +FK + + GE AGI S T+ + G NAYG+L+ E+GVHR Sbjct: 131 SQDWGSMLLRMYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYGYLRSEKGVHR 190 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR+SP+DS RRHTSF+S+ V P +DDS+E+ I+ D R+D YR+SGAGGQH+N T SA Sbjct: 191 LVRLSPFDSAGRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSA 250 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV Q ERSQ +N+ A NML+AKL+ELE QK+ E E ++ EIGWG Sbjct: 251 VRITHLPTGIVVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWG 310 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV PY MVKD RTN+E + V+DGDLDDF+ A L Sbjct: 311 SQIRSYVFHPYSMVKDHRTNLETANVQGVMDGDLDDFINAYL 352 >gi|109897685|ref|YP_660940.1| peptide chain release factor 2 [Pseudoalteromonas atlantica T6c] gi|109699966|gb|ABG39886.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudoalteromonas atlantica T6c] Length = 348 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 184/345 (53%), Positives = 240/345 (69%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ GG FD+D +RL +N + E P +W A+ L +E+ L+ + I ++ Sbjct: 1 MHRFGGTFDYDQKNERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLEQGC 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + LLELA+EE D L E +L + +E +F + SG D+ND Y+++ +G+G Sbjct: 61 VEVEELLELAVEESDQETLDEAEKDLAELVSRLETLEFRRMFSGPNDANDGYIDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+MLLRMY RW E FKTE +E+ DG+ AGIKSAT+ +G A+GWL+ E G Sbjct: 121 GTEAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS SRRHTSF+S++ YP +DD IEI+I SD RIDTYRASGAGGQHVN T Sbjct: 181 VHRLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHVNRT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH PT +VVQCQ +RSQHKNKAQA L+AKLYE E+QK+ E E SK++I Sbjct: 241 DSAVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQTMEDSKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 GWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIQASL 344 >gi|289626068|ref|ZP_06459022.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646233|ref|ZP_06477576.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. aesculi str. 2250] Length = 293 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 164/286 (57%), Positives = 216/286 (75%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ AG+ Sbjct: 5 LADAKDLLLMSAEEEDQAAVDDVATEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQAGS 64 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ E Sbjct: 65 GGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEI 124 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNT Sbjct: 125 GVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNT 184 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E +K++ Sbjct: 185 TDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSD 244 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IGWG QIRSYVL + +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 245 IGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 289 >gi|238759279|ref|ZP_04620445.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236] gi|238702440|gb|EEP94991.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236] Length = 310 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 171/307 (55%), Positives = 219/307 (71%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ +S I ++ + D LLELA+E DD E L + ++ +F Sbjct: 1 MGKERSALEEIVSTIDQLDQGMEDVSGLLELAIEADDEETFNEAVAELDTLDGKLGQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG Sbjct: 61 RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 121 LKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE E+QK+ + E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 KFIEASL 306 >gi|298488301|ref|ZP_07006333.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157123|gb|EFH98211.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 293 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 164/286 (57%), Positives = 216/286 (75%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ AG+ Sbjct: 5 LADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQAGS 64 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ E Sbjct: 65 GGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEI 124 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNT Sbjct: 125 GVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNT 184 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E +K++ Sbjct: 185 TDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSD 244 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IGWG QIRSYVL + +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 245 IGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 289 >gi|260223373|emb|CBA33874.1| Peptide chain release factor 2 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 342 Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 167/339 (49%), Positives = 234/339 (69%), Gaps = 1/339 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD+D +RL +N EDP +W + +A+ L +E++ LD + + ++ L DN L Sbjct: 1 MFDYDAKAERLRTVNASLEDPSVWNDPKKAQELGKEKKMLDGVVVTLNDLTSNLSDNTEL 60 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E++ EE D L ++ VE +F + + AD +L++ AGAGGTE+ D Sbjct: 61 YEMSKEEGDEESLLTIETETAKLTEIVEGLEFRRMFNNPADPLPCFLDIQAGAGGTEACD 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA+MLLR Y ++AE++ F ++ DG+ AGIKSAT+ I G A+G L+ E GVHRLVR Sbjct: 121 WASMLLRQYLKYAERKGFTANVEDLTDGDTAGIKSATIKIDGEYAFGHLRTETGVHRLVR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS+ RHTSF+S++VYP +DDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+ Sbjct: 181 KSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRL 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+VVQCQ RSQH N+ AW LR++LY+ EL+KR+E E +KT++GWG QI Sbjct: 241 THIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFELRKRQEEQQKLEDTKTDVGWGHQI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 301 RSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIQASL 338 >gi|325925182|ref|ZP_08186595.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas perforans 91-118] gi|325544436|gb|EGD15806.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas perforans 91-118] Length = 329 Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 172/317 (54%), Positives = 226/317 (71%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W + A+ L RER L+ + I ++ L D LLELA E D +L Sbjct: 1 MWNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTALAVIADLDN 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + VE +F+ + SG+ DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE Sbjct: 61 YQAHVEKLEFQRMFSGQMDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P Sbjct: 121 MEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 181 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL + +KDLRT IE++ Sbjct: 241 NAMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSD 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD+F++A+L Sbjct: 300 TQKVLDGDLDEFVEASL 316 >gi|311031920|ref|ZP_07710010.1| peptide chain release factor 2 [Bacillus sp. m3-13] Length = 326 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 172/323 (53%), Positives = 219/323 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A++++ E L + E+ + + + EL EE D + E Sbjct: 3 NPEFWNNQSSAQVVINEANALKEPVGQFHELSENYENLQLTYELVKEEPDAELQAELGSE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ + + + + LLSGE D N+A LE+H GAGGTESQDW ++LLRMYTRWAE++ FK Sbjct: 63 VKTVAEDFNKFELQLLLSGEHDKNNAILELHPGAGGTESQDWGSLLLRMYTRWAERKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P DD+IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ K Sbjct: 183 MPEFDDNIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+ +L +++ + + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NRERAMKMLQAKLYQKKLDEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGDLD F+ A L K Sbjct: 303 VGNTQAVMDGDLDPFIDAYLRSK 325 >gi|260892371|ref|YP_003238468.1| PE-PGRS family protein [Ammonifex degensii KC4] gi|260864512|gb|ACX51618.1| PE-PGRS family protein [Ammonifex degensii KC4] Length = 377 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 168/353 (47%), Positives = 240/353 (67%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L L D +RL+ L + E P W+++ A+ + +E L + + Sbjct: 12 LAERLKYLEDSLDLAQKEKRLALLEKEMEAPDFWRDLARAQAVTQEVASLRQCLGRFYRL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + +LLELA EE D +L E + +++++ E+E + E LLSG D+++A + +H Sbjct: 72 REGHEELSVLLELAAEEGDAQVLAELAQDVKKLAGEIEDLEVELLLSGPYDASNAIVSLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGT++QDW MLLRMY RWAE ++ L++ GEEAGIKS T + GP AYG+LK Sbjct: 132 AGAGGTDAQDWVAMLLRMYARWAEAHGYRIRTLDLLTGEEAGIKSVTFEVIGPRAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRL+RISP+D++ RRHTSF+S+ V P V D EI+I+ + RIDT+RASGAGGQH Sbjct: 192 AERGVHRLIRISPFDASGRRHTSFASVDVLPAVKDDTEIKIAPEELRIDTFRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGES 301 VN T++AVRITH+PTG+ V CQ ERSQ NKA A +LRA+L +L++++RE E+A + Sbjct: 252 VNKTETAVRITHLPTGITVTCQSERSQSANKAAAMEILRARLLDLKIKEREKELAALRGE 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIR+YVL PY +VKD RT +E+ VLDGD+DDF++A L ++ Sbjct: 312 VK-EIAWGNQIRTYVLHPYTLVKDHRTGVERRDIQAVLDGDIDDFIRAYLKVE 363 >gi|220929619|ref|YP_002506528.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10] gi|219999947|gb|ACL76548.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10] Length = 373 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 170/331 (51%), Positives = 233/331 (70%), Gaps = 2/331 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K +P W ++ ++ ++++ + L I I + D L EL LEE D S++ Sbjct: 37 LEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNITSQWEDLFTLAELGLEEQDESVI 96 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L ++K +E + E+LL+G D N+A L +HAGAGGTE+QDW MLLRM+TRW Sbjct: 97 PEVGEGLVQLKNNLESLRLETLLTGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFTRWG 156 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + ++ + L+ DG+EAGIKS T+ + G NAYG+LK E+GVHRLVRISP+DS+ RRHTS Sbjct: 157 EAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLKSEKGVHRLVRISPFDSSGRRHTS 216 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IEI I+ D RIDTYRASGAGGQH+N TDSA+RITHIPTGVVV CQ Sbjct: 217 FASLDVMPELDDTIEININPDDLRIDTYRASGAGGQHINKTDSAIRITHIPTGVVVSCQT 276 Query: 266 ERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ +NK A ML+AKL+EL E +++E+I ++ + + +I WG QIRSYV PY +VK Sbjct: 277 ERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDL-KGVQMDIAWGSQIRSYVFCPYTLVK 335 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 D RTN E+ + V+DG+LD F+ A L++ K Sbjct: 336 DHRTNYEEGNVDAVMDGELDGFINAYLSVGK 366 >gi|239618275|ref|YP_002941597.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1] gi|259585228|sp|C5CGS4|RF2_KOSOT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|239507106|gb|ACR80593.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1] Length = 370 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 178/339 (52%), Positives = 236/339 (69%), Gaps = 6/339 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D D ++LS + + DP +W + A L ++ Q L + + + ++Q+ L +N I + Sbjct: 25 DVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALRSQLDLLNKVQE-LFEN-IDIA 82 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + L E+D S L+ ++ L+ + V+ + LLS D+ +AYL VH GAGGTESQDWA Sbjct: 83 VELSEEDESYLENLNELLKEAEDMVKEFELNILLSSPYDAYNAYLSVHPGAGGTESQDWA 142 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +MLLRMY RWAE+ +K +E GEEAGIKSAT+ I GP AYG LK E GVHRLVRIS Sbjct: 143 SMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATINIAGPYAYGKLKYEAGVHRLVRIS 202 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D+N RRHTSF+S+ V+P +DD +EI+I D +IDTYRA GAGGQHVN T+SAVRITH Sbjct: 203 PFDANHRRHTSFASVSVFPEMDDDVEIDIRPEDLKIDTYRAGGAGGQHVNRTESAVRITH 262 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQI 312 IPTG+VV CQ ERSQH+NKA A +L+AKL+ELEL+K+ E++ +GE + +I WG QI Sbjct: 263 IPTGIVVTCQNERSQHQNKATAMKILKAKLFELELEKKRQEKMKLMGE--QKDIAWGNQI 320 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYV QPY MVKD RTN E V+DG +DDF++ L Sbjct: 321 RSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIEKEL 359 >gi|319779400|ref|YP_004130313.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9] gi|317109424|gb|ADU92170.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9] Length = 327 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 167/321 (52%), Positives = 239/321 (74%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 EDP++W + +A+ L +E++ L++ + + E++ + D+ L LALE++D S L + Sbjct: 4 EDPNIWNDPEKAQSLSKEKKSLEDVVIVLSELEQSIRDSKDLYTLALEDNDDSTLIAIEE 63 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + ++ ++E +F + S AD + ++++ GAGGTE+QDWA+MLLR Y R+ E++ F Sbjct: 64 DSKKYLEKIEGLEFRRMFSQPADPLNCFIDIQFGAGGTEAQDWASMLLRQYLRYCERKGF 123 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 KTE LE G+ AGIKSAT+ ++G A+G L+ E GVHRLVR SP+DS + RHTSF+S++ Sbjct: 124 KTEVLEESAGDVAGIKSATIKVEGDYAFGLLRTESGVHRLVRKSPFDSANGRHTSFASLY 183 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VVQCQ +RSQH Sbjct: 184 VYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQH 243 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NKA+A +ML++KLYELEL+KR E SK+++GWG QIRSYVL + +KDLRTN+ Sbjct: 244 RNKAEAMSMLKSKLYELELRKRMAEQQKLEESKSDVGWGHQIRSYVLDQSR-IKDLRTNV 302 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E ++ VLDGDLD F++A+L Sbjct: 303 EVSNTQKVLDGDLDMFIEASL 323 >gi|58584553|ref|YP_198126.1| protein chain release factor B [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418869|gb|AAW70884.1| Protein chain release factor B [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 336 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 164/334 (49%), Positives = 232/334 (69%), Gaps = 1/334 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L ++T D +LWQ+ +A+ +++E + N + +++ D + L++ A++E+D Sbjct: 2 RLEKLESQTADGNLWQDNQKAQEVLKEYSKIKNDVESFSKLESDYNDAISLMKSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E + L +++ ++ K+ + L + EAD+ND +LE+H+GAGGTES DWA ML+RMY Sbjct: 62 EEFFSEVENELVKLEKLIKRKETDFLFTDEADNNDCFLEIHSGAGGTESNDWAEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 RWAE FK E +E +G+ GIKSA + I G AYGW K E G+HRLVRISP+D+NS Sbjct: 122 IRWAEIYHNFKVEVVEKLEGDSIGIKSAIIKIIGEKAYGWAKSESGIHRLVRISPFDANS 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF SI V PV++DSI+I + E +IDTYRASGAGGQHVN T+SAVR+THIPTGV+ Sbjct: 182 KRHTSFVSIGVTPVIEDSIDIAVDEGTLKIDTYRASGAGGQHVNKTESAVRVTHIPTGVI 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ RSQH+NK +A +L+ +LY+++L+K+E+ K IGWG QIRSYV+ PY Sbjct: 242 VQCQNNRSQHQNKNEALKLLKGRLYQIKLEKKEQKMAEEYGKKCGIGWGNQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QMVKDLRT E + + + DG++D F+ L K Sbjct: 302 QMVKDLRTGYEVGNINSIFDGNIDCFIVNVLTNK 335 >gi|261345593|ref|ZP_05973237.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541] gi|282566073|gb|EFB71608.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541] Length = 299 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 166/280 (59%), Positives = 211/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD ET L++++ ++E +F + SGE DS + Y+++ AG+GGTE+Q Sbjct: 17 LLELAIEADDEETFNETDAELEQLQGKLEQLEFRRMFSGEYDSANCYIDLQAGSGGTEAQ 76 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE + FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLV Sbjct: 77 DWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGDYAYGWLRTETGVHRLV 136 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 137 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 196 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPT +V QCQ +RSQHKNK QA L+AKLYELE+QK+ E +K++IGWG Q Sbjct: 197 ITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEIQKKNADKQAMEENKSDIGWGSQ 256 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 257 IRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 295 >gi|168333703|ref|ZP_02691956.1| peptide chain release factor 2 [Epulopiscium sp. 'N.t. morphotype B'] Length = 349 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 177/344 (51%), Positives = 232/344 (67%), Gaps = 4/344 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD + ++++ L T + P WQN A+ +++E + IS K++ + D L Sbjct: 4 GDLFDVTHVQEQITELETISATPDFWQNSKYAQSVLQEXKDYKEIISKYKKLCNMYEDVL 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+++ +EE D + E + + + +LL GE D NDA + +HAGAGGTE+ Sbjct: 64 VLIDMGIEEHDADMCAEAISDANSFIEFYDNLRTSTLLDGEYDKNDAIISLHAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW NMLLRMYTRWAEK FK++ L+I DGEEAG+KSATL I G NAYG+LK E+G+HRL Sbjct: 124 CDWNNMLLRMYTRWAEKHGFKSKLLDILDGEEAGVKSATLEISGQNAYGYLKSEKGIHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS RRHTSF+S+ V P +DD+ EI I+ D +IDTYR+SGAGGQHVNTTDSAV Sbjct: 184 VRISPFDSGGRRHTSFASLDVMPKIDDTAEITINPEDLQIDTYRSSGAGGQHVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSKTEIGW 308 RITH P+G+VVQCQ ERSQ +N+ ML +KL L Q +E++ I E K +I W Sbjct: 244 RITHKPSGIVVQCQNERSQIQNRETCMKMLASKL--LYKQHQEQLLKIDEIRGEKKDIAW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYV PY MVKD RTN E + V+DGD+D F+ A LA Sbjct: 302 GSQIRSYVFHPYNMVKDHRTNQETGNTGAVMDGDIDAFVNAYLA 345 >gi|94969367|ref|YP_591415.1| peptide chain release factor 2 [Candidatus Koribacter versatilis Ellin345] gi|94551417|gb|ABF41341.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Koribacter versatilis Ellin345] Length = 343 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 171/325 (52%), Positives = 226/325 (69%), Gaps = 4/325 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSD 90 DP+LW N ++ +MRER+ L++A++ K++ R D +LA E ED + L+ D Sbjct: 10 DPNLWGNPENSQRVMRERKRLEDALATDKDLSRRTDDITAYFDLAKEGEDITADLRREMD 69 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L+ I VE + E+LLSG++D A + +H GAGGTESQDWA MLLRMY RWAE++ F Sbjct: 70 QLRDI---VEKLETETLLSGDSDRLSAIVTIHPGAGGTESQDWAEMLLRMYLRWAERQGF 126 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 +T + GEEAG+KS T+ + G +AYG L E GVHRLVRISP+D RRHTSF+S++ Sbjct: 127 ETTVNDYQPGEEAGLKSVTITVAGQDAYGLLTSEIGVHRLVRISPFDQAKRRHTSFASVF 186 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +D+SIE+ + D R DTYR+ G GGQHVNTTDSAVRITH PTG+VV CQ ERSQH Sbjct: 187 VSPEIDESIEVIVKPDDIRTDTYRSGGKGGQHVNTTDSAVRITHFPTGIVVSCQNERSQH 246 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ +A +LR+K+YE EL+K+ + E SK +I +G QIRSYVL PY+MVKD RT Sbjct: 247 KNRERAMKILRSKIYEYELEKKRAASQKVEDSKLDIDFGSQIRSYVLHPYRMVKDHRTKF 306 Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355 E P VLDGDL F++A L +++ Sbjct: 307 EVGDPDRVLDGDLKGFIRAYLLMRR 331 >gi|170725301|ref|YP_001759327.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908] gi|238688657|sp|B1KFR6|RF2_SHEWM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|169810648|gb|ACA85232.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908] Length = 365 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 172/342 (50%), Positives = 235/342 (68%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L G+FD+D +RL ++ + E +W N A+ L +ER L+ + I ++ L D Sbjct: 21 LRGIFDYDAKKERLEEVSAELESSEVWNNPENAQALGKERSALELVVKTIDDMDSGLEDV 80 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+EE+D + S L ++ +E +F + SG D +D YL++ +G+GGTE Sbjct: 81 EGLVELAVEEEDEETFADASSELDALEKRLEELEFRRMFSGPHDISDCYLDIQSGSGGTE 140 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRM+ RW E +K E +E+ DG+ AGIK AT+ G A+G L+ E GVHR Sbjct: 141 AQDWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHR 200 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA Sbjct: 201 LVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESA 260 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E +K++IGWG Sbjct: 261 IRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQQAEDAKSDIGWG 320 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 321 SQIRSYVLDDAR-IKDLRTGVESRNTQSVLDGDLDKFIEASL 361 >gi|118475480|ref|YP_892510.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus 82-40] gi|166223624|sp|A0RQM7|RF2_CAMFF RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|118414706|gb|ABK83126.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus 82-40] Length = 369 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 164/323 (50%), Positives = 219/323 (67%), Gaps = 2/323 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W ++ +A + +E+ + N + K ++ + D L ELA EDD + ++ Sbjct: 43 PEFWNDIKKASEIGKEKTKISNMLCKFKNVKSAISDAYELYELANAEDDEQTINSLFEDA 102 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 Q ++ ++ + +LSGE DS +A + +H GAGGTES DWA+ML RMY R+ E+ FK Sbjct: 103 QNLENKITNLEISMMLSGEDDSKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGFKV 162 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ +G+EAG+K + ++KG NAYG+LK E G+HRLVR SP+DS RRHTSFSS+ V Sbjct: 163 ETLDFQEGDEAGLKDVSFIVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVS 222 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P VDD I IEI E D R+D YRASGAGGQHVN T+SAVRITHIPTG+VVQCQ +RSQHKN Sbjct: 223 PEVDDDIAIEIEEKDLRLDYYRASGAGGQHVNKTESAVRITHIPTGIVVQCQNDRSQHKN 282 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 KA A ML+++LYE EL K++E N E K+EIGWG QIRSYVL PYQ VKD R+ Sbjct: 283 KATAMKMLKSRLYEFELMKQQEANNAIE--KSEIGWGHQIRSYVLFPYQQVKDTRSGEAY 340 Query: 333 TSPSDVLDGDLDDFMKATLAIKK 355 + +LDGD+ +++ L +K Sbjct: 341 SQTDAILDGDIKKIIESVLISQK 363 >gi|34556562|ref|NP_906377.1| peptide chain release factor 2 [Wolinella succinogenes DSM 1740] gi|81833248|sp|Q7MAP4|RF2_WOLSU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|34482276|emb|CAE09277.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Wolinella succinogenes] Length = 368 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 178/353 (50%), Positives = 244/353 (69%), Gaps = 8/353 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + + + + D+ RL + W + +A + +E++ L+ + +E Sbjct: 12 ELSTKRDNIAKIIKPDSIENRLGEIEALEHSEGFWNDATKAGEVQKEKRKLERILKKYEE 71 Query: 62 IQDRLCDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + D L E+A +++D +L E S +L++ E++ + E +LSGE D ++A Sbjct: 72 ANQAINDAKELFEIATQDNDEETLGLLFEESGHLEK---EIKSVEIEVMLSGEHDGSNAI 128 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + +H GAGGTESQDWA++L RMY RWAE+R FK E L+ +GEEAGIK A+ +IKG NAY Sbjct: 129 ITIHPGAGGTESQDWASILYRMYLRWAERRGFKVEVLDYQEGEEAGIKDASFIIKGENAY 188 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+LK E G+HRLVRISP+D+N++RHTSF+S+ V P VDD I+IEI E D R+DTYRASGA Sbjct: 189 GYLKVENGIHRLVRISPFDANAKRHTSFTSVMVSPEVDDDIDIEIEEKDLRLDTYRASGA 248 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL KR A Sbjct: 249 GGQHVNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELAKRS--AEY 306 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGDLD+ ++ L Sbjct: 307 DSMEKSEIGWGHQIRSYVLAPYQQVKDTRSNIAYSNIEAILDGDLDELLEGVL 359 >gi|58582496|ref|YP_201512.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624384|ref|YP_451756.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166711947|ref|ZP_02243154.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575993|ref|YP_001912922.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae PXO99A] gi|58427090|gb|AAW76127.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368324|dbj|BAE69482.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188520445|gb|ACD58390.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 329 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 172/317 (54%), Positives = 226/317 (71%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W + A+ L RER L+ + I ++ L D LLELA E D +L + Sbjct: 1 MWNDAERAQALGRERSMLEKTVIGIADVLSGLVDAGDLLELAESEQDEDTALAVIADLDK 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + VE +FE + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE Sbjct: 61 YQTHVEKLEFERMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P Sbjct: 121 MEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 181 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL + +KDLRT IE++ Sbjct: 241 NAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSD 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD+F++A+L Sbjct: 300 TQKVLDGDLDEFVEASL 316 >gi|257082363|ref|ZP_05576724.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol] gi|256990393|gb|EEU77695.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol] Length = 327 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 170/320 (53%), Positives = 218/320 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N+ A+ L+ E L ++ + L + ++ EL EE D I +E + Sbjct: 3 EPGFWDNIETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE F+ Sbjct: 63 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322 >gi|317130277|ref|YP_004096559.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM 2522] gi|315475225|gb|ADU31828.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM 2522] Length = 366 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 172/352 (48%), Positives = 232/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++LN G D + R++ L DP W N A+ ++ E L + +E+ Sbjct: 13 MAKRLNDFRGSLDLEEKETRIAELEELMSDPSFWDNQDNAQKIISENNALKEMVDTYREL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D + EL EE D + + ++ + + + + LLS D N+A LE+H Sbjct: 73 EAEQEDLDVSYELVKEEGDEELAADLHAGIKELGKKFNDFELQLLLSEPYDKNNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMY RWA+ + FK E L+ G+EAG+KS TL+I G NAYG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYQRWADDKGFKVETLDYLPGDEAGVKSVTLMISGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +DD++EIEIS +IDTYRASGAGGQH Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIEISPDQLKIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+PT VV CQ ERSQ KN+ QA ML+AKL++LE++++++ + Sbjct: 253 INTTDSAVRITHLPTNTVVTCQSERSQIKNREQAMKMLKAKLFQLEIERQQQELDEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +++IGWG QIRSYV PY MVKD RTN E + V+DG+LD F+ A L K Sbjct: 313 QSDIGWGSQIRSYVFHPYNMVKDHRTNYETGNTQSVMDGELDPFIDAYLRSK 364 >gi|261212226|ref|ZP_05926512.1| peptide chain release factor 2 [Vibrio sp. RC341] gi|260838834|gb|EEX65485.1| peptide chain release factor 2 [Vibrio sp. RC341] Length = 300 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 167/289 (57%), Positives = 217/289 (75%), Gaps = 2/289 (0%) Query: 64 DRLCDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 DR D++ LLELA+E +D E L +++++E +F + SG+ DS+D YL++ Sbjct: 9 DRGVDDVEGLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSSDCYLDLQ 68 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ Sbjct: 69 AGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLR 128 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQH Sbjct: 129 TETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQH 188 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E + Sbjct: 189 VNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDA 248 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 249 KSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 296 >gi|255029564|ref|ZP_05301515.1| peptide chain release factor 2 [Listeria monocytogenes LO28] Length = 366 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 176/350 (50%), Positives = 230/350 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K ++Q+ GLFD D+ R++ L + DP+ W + A+ ++ E Sbjct: 12 KTAQQIKDFRGLFDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHA 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ I LEL EE D + +E +++ + + + +LS D N+A LE+ Sbjct: 72 LEEEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E Sbjct: 252 HINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L Sbjct: 312 EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYL 361 >gi|206601601|gb|EDZ38084.1| Peptide chain release factor 2 [Leptospirillum sp. Group II '5-way CG'] Length = 370 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 172/353 (48%), Positives = 237/353 (67%), Gaps = 5/353 (1%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M +R GG+FD D L ++ +++ P W++ A+ ++RE+ L+ +S I+ Sbjct: 1 MGKNRGFPRSGGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQ 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 I D L ELA D L E S + V+ + E +LS N A+LE Sbjct: 61 GIDREDADIRALFELA---SDPDFLAELSRRVPEFSESVKAFELEEILSEAKSDNPAFLE 117 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTESQDWA MLLRMY RWAE+ E ++I GEEAGIKSAT+L++G +A+G+ Sbjct: 118 IHPGAGGTESQDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGY 177 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G+HRLVRISP+D+N RRHTSF+S++VYP ++D + +EI + D RIDT+RAS AGG Sbjct: 178 LMSESGIHRLVRISPFDANKRRHTSFTSVFVYPELEDDVPVEIRDEDIRIDTFRASSAGG 237 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-- 298 QHVN T SA+R+TH+PTG+V+ Q ERSQ +N+ A+ +LRAKLYELE ++++E + Sbjct: 238 QHVNKTSSAIRLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKIS 297 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +K +IGWG QIRSYVLQPYQ++KD RT +E S+VLDGDLD F++ L Sbjct: 298 GAQNKKDIGWGHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYL 350 >gi|156932658|ref|YP_001436574.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894] gi|156530912|gb|ABU75738.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894] Length = 293 Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 169/286 (59%), Positives = 210/286 (73%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D LLELA+E DD E L +++ ++ +F + SGE DS D YL++ AG+ Sbjct: 5 LDDVAGLLELAVEADDEETFNEAVAELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQAGS 64 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AG+KSAT+ I G A+GWL+ E Sbjct: 65 GGTEAQDWASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRTET 124 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHVN Sbjct: 125 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHVNR 184 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++ Sbjct: 185 TESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSD 244 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 245 IGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 289 >gi|71908457|ref|YP_286044.1| peptide chain release factor 2 [Dechloromonas aromatica RCB] gi|71848078|gb|AAZ47574.1| bacterial peptide chain release factor 2 (bRF-2) [Dechloromonas aromatica RCB] Length = 325 Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 165/322 (51%), Positives = 234/322 (72%), Gaps = 3/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETS 89 EDP +W + A+ L RE++ L+N + ++E+Q L D L ++ E+ D+ ++L + Sbjct: 2 EDPKIWDDAKRAQELGREKKSLENIVLVLEEVQSGLNDGRELFDMGKEDGDEDTLLSVEA 61 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 DN + ++ +V +F + + +D +LE+ AGAGGTE+QDWA+MLLRMY ++ EK+ Sbjct: 62 DNAE-LEKKVAALEFRRMFNNPSDPMPCFLEIQAGAGGTEAQDWASMLLRMYLKYGEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E +E +G+ AG+KSAT+ G AYG L+ E G+HRLVR SP+DSN+RRHTSF+S+ Sbjct: 121 FTVEVMEESEGDVAGLKSATVKFTGDYAYGTLRTETGIHRLVRKSPFDSNARRHTSFTSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V+P VDDSIEI I+ +D R DTYRASGAGGQH+N TDSAVR+TH+PTG+VVQCQ +RSQ Sbjct: 181 FVFPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHVPTGIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+N+ +AW MLRA++YE EL+K++ E +K++IGWG QIRSYVL + +KDLRTN Sbjct: 241 HRNRDEAWQMLRARIYEFELRKQQAEQQKLEDAKSDIGWGHQIRSYVLDQSR-IKDLRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + VLDGDLD F++A+L Sbjct: 300 HETGNTQAVLDGDLDPFIEASL 321 >gi|126173117|ref|YP_001049266.1| peptide chain release factor 2 [Shewanella baltica OS155] gi|153002001|ref|YP_001367682.1| peptide chain release factor 2 [Shewanella baltica OS185] gi|304410531|ref|ZP_07392149.1| peptide chain release factor 2 [Shewanella baltica OS183] gi|307304624|ref|ZP_07584374.1| peptide chain release factor 2 [Shewanella baltica BA175] gi|125996322|gb|ABN60397.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella baltica OS155] gi|151366619|gb|ABS09619.1| peptide chain release factor 2 [Shewanella baltica OS185] gi|304351015|gb|EFM15415.1| peptide chain release factor 2 [Shewanella baltica OS183] gi|306912026|gb|EFN42450.1| peptide chain release factor 2 [Shewanella baltica BA175] Length = 352 Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 175/342 (51%), Positives = 234/342 (68%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E +W + A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E S VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDDAR-IKDLRTGVENRSTQAVLDGDLDKFIEASL 348 >gi|332974657|gb|EGK11574.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330] Length = 367 Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 173/357 (48%), Positives = 243/357 (68%), Gaps = 8/357 (2%) Query: 2 KLSRQLNCLGG-------LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 +L+ QLN L D+ RL + +EDP LW + A+ + +ER+ L+ Sbjct: 8 QLNNQLNDLAKRNDDIRVYMDYQGKKDRLEEVVGLSEDPDLWNDPKRAQDIGKERKLLEG 67 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + + +I + + DN L+++ +EE D ++ ++ ++ +F+ + + AD Sbjct: 68 VVLTLDKITNGIDDNRELIDMVVEEGDADGFAAIIADVAELEKQMADLEFKRMFNQPADP 127 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N+ ++++ AGAGGTE++DWA MLLRMYTR+AE++ FK E +E DGE AGI +ATL I+G Sbjct: 128 NNCFIDITAGAGGTEAEDWAGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEG 187 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 AYG L+ E GVHRLVR SP+DSN++RHTSFSS++VYP VDDS E+EI+ +D R DTYR Sbjct: 188 EYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEVDDSFEVEINPADLRTDTYR 247 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQH+N TDSAVRITHIPTG+VVQ Q RSQH+N+ MLR+KL+ELE++KR E Sbjct: 248 ASGAGGQHINKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNE 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E K+++GWG QIRSYVL + +KDLRT+ E + VLDGDLD F++A+L Sbjct: 308 EKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTSYEVGNTKAVLDGDLDGFIEASL 363 >gi|237807749|ref|YP_002892189.1| peptide chain release factor 2 [Tolumonas auensis DSM 9187] gi|259585231|sp|C4LCN9|RF2_TOLAT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|237500010|gb|ACQ92603.1| hypothetical protein Tola_0975 [Tolumonas auensis DSM 9187] Length = 365 Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 171/353 (48%), Positives = 239/353 (67%), Gaps = 7/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G D+D +RL ++ + E P +W A+ L +ER L++ ++ I Sbjct: 13 ELSERTELLRGYLDYDAKKERLEEVSAELEQPEVWNEPERAQALGKERSALESVVATIDV 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQET---SDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + D +L+ LA+E +D E +D L++ +++E+++ + SG+ D++D Y Sbjct: 73 LTQGAEDVEMLVSLAVEGEDEETFHEAETEADALEKKLVDLEFRR---MFSGQHDASDCY 129 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ +G+GGTE+QDWA+M+LRMY RW E +K E +E DG+ AGIKSAT+ G A+ Sbjct: 130 MDIQSGSGGTEAQDWADMVLRMYLRWGEAHGYKPELIECSDGDVAGIKSATIKFTGEYAF 189 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 GWL+ E GVHRLVR SP+DS RRHTSF S +VYP +D+ +EIEI+ +D RID YRASGA Sbjct: 190 GWLRTETGVHRLVRKSPFDSGGRRHTSFCSAFVYPEIDEDVEIEINPADLRIDVYRASGA 249 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SAVRITHIPT V QCQ +RSQHKNK QA L+AKLYELE+ K+ Sbjct: 250 GGQHVNRTESAVRITHIPTNTVTQCQNDRSQHKNKDQAMKQLKAKLYELEMMKQNAEKQA 309 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 310 LEETKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 361 >gi|91794477|ref|YP_564128.1| peptide chain release factor 2 [Shewanella denitrificans OS217] gi|91716479|gb|ABE56405.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella denitrificans OS217] Length = 352 Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 177/342 (51%), Positives = 233/342 (68%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+ N +RL ++ + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYANKKERLEEVSLELESSAVWNEPERAQALGKERSALEAVVKTIDDLDSGLEDI 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+EEDD E S L ++ +E +F + SG DS D YL++ +G+GGTE Sbjct: 68 EGLVELAIEEDDEDTFNEASAELDELERRLEDLEFRRMFSGPNDSADCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ S+ RIDTYRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPSELRIDTYRASGAGGQHVNKTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ RSQHKNK A L+AKLYELE+ K+ E +K++IGWG Sbjct: 248 IRITHLPTNTVVQCQSGRSQHKNKDSAMKQLKAKLYELEMMKQNVDKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDDAR-IKDLRTGVENRNTQTVLDGDLDKFIEASL 348 >gi|208434124|ref|YP_002265790.1| peptide chain release factor RF-2 [Helicobacter pylori G27] gi|238054481|sp|B5Z9U4|RF2_HELPG RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|208432053|gb|ACI26924.1| peptide chain release factor RF-2 [Helicobacter pylori G27] Length = 363 Score = 342 bits (876), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 175/334 (52%), Positives = 239/334 (71%), Gaps = 2/334 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + L + ++ V+ + E +LSGE D+++A + + GAGGTESQDWA++L RM Sbjct: 91 DETTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQDWASILYRM 150 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D+N+ Sbjct: 151 YLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFDANA 210 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PTG+V Sbjct: 211 KRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIV 270 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL PY Sbjct: 271 VQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVLAPY 328 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 Q VKD R+NI ++ +LDGD+D ++ L K Sbjct: 329 QQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|152979178|ref|YP_001344807.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z] gi|150840901|gb|ABR74872.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z] Length = 335 Score = 342 bits (876), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 174/332 (52%), Positives = 236/332 (71%), Gaps = 1/332 (0%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 ++RL +N + E P +W +A+ L +ER L+ + IK++ L D LLELA+E Sbjct: 1 MERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAVVDTIKKLDQGLEDVDGLLELAVEG 60 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 +D E L ++ ++ +F + SGE D+ D Y+++ AG+GGTE+QDW MLLR Sbjct: 61 EDQETFDEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLR 120 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLVR SP+DSN Sbjct: 121 MYLRWAESKGFKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSN 180 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 +RRHTSF++ +VYP +DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+ Sbjct: 181 NRRHTSFAAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGI 240 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VVQCQ +RSQHKNK Q L+AKLYE+ELQK+ E SK++IGWG QIRSYVL Sbjct: 241 VVQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDD 300 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 SR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 331 >gi|254778885|ref|YP_003056990.1| peptide chain release factor 2 [Helicobacter pylori B38] gi|254000796|emb|CAX28720.1| Peptide chain release factor 2 (RF-2) [Helicobacter pylori B38] Length = 363 Score = 342 bits (876), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 180/337 (53%), Positives = 241/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ +D L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|15617035|ref|NP_240248.1| peptide chain release factor 2 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681787|ref|YP_002468173.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471489|ref|ZP_05635488.1| peptide chain release factor 2 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|25299669|pir||F84980 peptide chain release factor 2 [imported] - Buchnera sp. (strain APS) gi|10039100|dbj|BAB13134.1| peptide chain release factor 2 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624630|gb|ACL30785.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311087327|gb|ADP67407.1| peptide chain release factor 2 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 349 Score = 341 bits (875), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 161/345 (46%), Positives = 239/345 (69%), Gaps = 1/345 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 L G+FD++ R+ ++ + P W I K L +E+ L++ I I EI++ + + Sbjct: 4 ILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKE 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +I LELA+E D + +E+ +Q+I+ E++ +F + S + D D Y+++ +G+GGT Sbjct: 64 VVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQSGSGGT 123 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ++QDW+ MLLRMY RWA+K+ F TE ++ GE GIKS+T+ + G A+GW + E G+H Sbjct: 124 DAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RL+R SP+DS RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+S Sbjct: 184 RLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTES 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT +V QCQ RSQHKNK QA +++KLYE++++K++E E +K++I W Sbjct: 244 AVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITW 303 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSY+L + +KDLRT +EK VLDGDLDDF++ +L + Sbjct: 304 GNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347 >gi|121587849|ref|ZP_01677606.1| peptide chain release factor 2 [Vibrio cholerae 2740-80] gi|121728386|ref|ZP_01681414.1| peptide chain release factor 2 [Vibrio cholerae V52] gi|147673826|ref|YP_001216157.1| peptide chain release factor 2 [Vibrio cholerae O395] gi|153216950|ref|ZP_01950714.1| peptide chain release factor 2 [Vibrio cholerae 1587] gi|153801991|ref|ZP_01956577.1| peptide chain release factor 2 [Vibrio cholerae MZO-3] gi|153818695|ref|ZP_01971362.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457] gi|153822281|ref|ZP_01974948.1| peptide chain release factor 2 [Vibrio cholerae B33] gi|153826509|ref|ZP_01979176.1| peptide chain release factor 2 [Vibrio cholerae MZO-2] gi|153829166|ref|ZP_01981833.1| peptide chain release factor 2 [Vibrio cholerae 623-39] gi|227080844|ref|YP_002809395.1| peptide chain release factor 2 [Vibrio cholerae M66-2] gi|229505715|ref|ZP_04395225.1| peptide chain release factor 2 [Vibrio cholerae BX 330286] gi|229508711|ref|ZP_04398204.1| protein chain release factor B [Vibrio cholerae B33] gi|229512924|ref|ZP_04402391.1| peptide chain release factor 2 [Vibrio cholerae TMA 21] gi|229519540|ref|ZP_04408983.1| peptide chain release factor 2 [Vibrio cholerae RC9] gi|229520954|ref|ZP_04410376.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80] gi|229530470|ref|ZP_04419858.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)] gi|229608734|ref|YP_002879382.1| protein chain release factor B [Vibrio cholerae MJ-1236] gi|254226529|ref|ZP_04920112.1| peptide chain release factor 2 [Vibrio cholerae V51] gi|255743877|ref|ZP_05417833.1| peptide chain release factor 2 [Vibrio cholera CIRS 101] gi|262156096|ref|ZP_06029215.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1] gi|262169962|ref|ZP_06037652.1| peptide chain release factor 2 [Vibrio cholerae RC27] gi|262191216|ref|ZP_06049415.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93] gi|121547885|gb|EAX57969.1| peptide chain release factor 2 [Vibrio cholerae 2740-80] gi|121629320|gb|EAX61752.1| peptide chain release factor 2 [Vibrio cholerae V52] gi|124114015|gb|EAY32835.1| peptide chain release factor 2 [Vibrio cholerae 1587] gi|124122450|gb|EAY41193.1| peptide chain release factor 2 [Vibrio cholerae MZO-3] gi|125620933|gb|EAZ49284.1| peptide chain release factor 2 [Vibrio cholerae V51] gi|126510775|gb|EAZ73369.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457] gi|126520177|gb|EAZ77400.1| peptide chain release factor 2 [Vibrio cholerae B33] gi|146315709|gb|ABQ20248.1| peptide chain release factor 2 [Vibrio cholerae O395] gi|148875355|gb|EDL73490.1| peptide chain release factor 2 [Vibrio cholerae 623-39] gi|149739689|gb|EDM53896.1| peptide chain release factor 2 [Vibrio cholerae MZO-2] gi|227008732|gb|ACP04944.1| peptide chain release factor 2 [Vibrio cholerae M66-2] gi|227012488|gb|ACP08698.1| peptide chain release factor 2 [Vibrio cholerae O395] gi|229332243|gb|EEN97731.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)] gi|229342187|gb|EEO07183.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80] gi|229344229|gb|EEO09204.1| peptide chain release factor 2 [Vibrio cholerae RC9] gi|229350173|gb|EEO15126.1| peptide chain release factor 2 [Vibrio cholerae TMA 21] gi|229354235|gb|EEO19165.1| protein chain release factor B [Vibrio cholerae B33] gi|229357938|gb|EEO22855.1| peptide chain release factor 2 [Vibrio cholerae BX 330286] gi|229371389|gb|ACQ61812.1| protein chain release factor B [Vibrio cholerae MJ-1236] gi|255738508|gb|EET93897.1| peptide chain release factor 2 [Vibrio cholera CIRS 101] gi|262021696|gb|EEY40407.1| peptide chain release factor 2 [Vibrio cholerae RC27] gi|262030132|gb|EEY48777.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1] gi|262032918|gb|EEY51457.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93] gi|327483462|gb|AEA77869.1| Peptide chain release factor 2 [Vibrio cholerae LMA3894-4] Length = 299 Score = 341 bits (875), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 167/289 (57%), Positives = 216/289 (74%), Gaps = 2/289 (0%) Query: 64 DRLCDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 DR D++ LLELA+E +D E L ++ ++E +F + SG+ DS+D YL++ Sbjct: 8 DRGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQ 67 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ Sbjct: 68 AGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLR 127 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQH Sbjct: 128 TETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQH 187 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E + Sbjct: 188 VNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDA 247 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 248 KSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 295 >gi|259909551|ref|YP_002649907.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96] gi|224965173|emb|CAX56705.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96] Length = 293 Score = 341 bits (875), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 210/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E +D E + L + ++ +F + SGE DS D Y+++ AG+GGTE+Q Sbjct: 11 LLELAVEAEDEETFNEAVNELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE + FKTE +E DGE AG KSAT+ I G A+GWL+ E GVHRLV Sbjct: 71 DWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ E +K++IGWG Q Sbjct: 191 ITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 289 >gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3] gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3] Length = 377 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 164/347 (47%), Positives = 240/347 (69%), Gaps = 2/347 (0%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +++ LG D A + L K W ++ ++ ++++ + L + I+ + ++ + Sbjct: 20 EIDDLGRALGLDAARAEVRELEEKAAQQDFWNDIENSQSVLQKTRQLKDKIASYEALRRK 79 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 D L L+ELA EE+D S+L E ++ + ++ +++ + +LL+GE D+ +A L HAGA Sbjct: 80 TDDTLALIELADEEEDLSVLAEAAEAVDSVRAQIDTMRLATLLTGEYDAKNAILTFHAGA 139 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA ML RMYTRWAE+ F + L+ DGEEAG+KSA++LI+G NAYG+LK E Sbjct: 140 GGTEAQDWAEMLYRMYTRWAERHGFNVQVLDYLDGEEAGLKSASVLIEGLNAYGYLKSEI 199 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR+SP+DS+ RRHTSF+S+ V P +DDSIE++I D ++D +R+SGAGGQH+N Sbjct: 200 GVHRLVRVSPFDSSGRRHTSFASVEVMPEIDDSIEVDIRPEDIKMDVFRSSGAGGQHINK 259 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKT 304 T SAVR+TH+PTG+VV CQ ERSQH+N+ A ML++KL E+ E + ++I +I + + Sbjct: 260 TSSAVRLTHLPTGIVVSCQNERSQHQNREMAMRMLKSKLVEIKEREHYDKIEDI-KGVQK 318 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EI WG QIRSYV PY +VKD RT+ E + V+DGDLD F+ A L Sbjct: 319 EIAWGSQIRSYVFMPYTLVKDHRTSFESGNIGAVMDGDLDGFINAYL 365 >gi|311087834|gb|ADP67913.1| peptide chain release factor 2 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 349 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 161/345 (46%), Positives = 239/345 (69%), Gaps = 1/345 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 L G+FD++ R+ ++ + P W I K L +E+ L++ I I EI++ + + Sbjct: 4 ILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKE 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +I LELA+E D + +E+ +Q+I+ E++ +F + S + D D Y+++ +G+GGT Sbjct: 64 VVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDYYDCYIDIQSGSGGT 123 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ++QDW+ MLLRMY RWA+K+ F TE ++ GE GIKS+T+ + G A+GW + E G+H Sbjct: 124 DAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RL+R SP+DS RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+S Sbjct: 184 RLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTES 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT +V QCQ RSQHKNK QA +++KLYE++++K++E E +K++I W Sbjct: 244 AVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITW 303 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSY+L + +KDLRT +EK VLDGDLDDF++ +L + Sbjct: 304 GNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347 >gi|88607366|ref|YP_505078.1| peptide chain release factor 2, programmed frameshift [Anaplasma phagocytophilum HZ] gi|88598429|gb|ABD43899.1| peptide chain release factor 2 [Anaplasma phagocytophilum HZ] Length = 376 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 166/330 (50%), Positives = 227/330 (68%), Gaps = 1/330 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L L+ + P LW + +AK L+ ER + ++ + ++ D L E+ + DD Sbjct: 34 LESLDLECSSPSLWDDAEKAKSLLSERSRVSAVLTSFRVLEKEHKDLAELAEMISDSDDR 93 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 L + LQ +KL + K+ E + S EAD+N +L + +GAGGTES DW MLLRMYT Sbjct: 94 DFLATINAELQSLKLRISQKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRMYT 153 Query: 143 RWAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 +WAE +F E ++ DGEE G+K+ T+ I G AYGW + E G+HRLVRISP+D ++ Sbjct: 154 KWAESFHEFTVETVDSVDGEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAK 213 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF+S+ V PVVD I+I+I E D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VV Sbjct: 214 RHTSFASVEVSPVVDHEIDIKILEKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGMVV 273 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ RSQH+N+A+A+++L+++LYE+ELQ++E+ +K EIGWG QIRSYV+ PY+ Sbjct: 274 QCQTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQDHQNKCEIGWGHQIRSYVMHPYR 333 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKDLRT E + V++GDLD F+ A L Sbjct: 334 MVKDLRTGHETGNVDAVMNGDLDAFITAAL 363 >gi|229545626|ref|ZP_04434351.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322] gi|229549816|ref|ZP_04438541.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200] gi|255972544|ref|ZP_05423130.1| peptide chain release factor 2 [Enterococcus faecalis T1] gi|255975657|ref|ZP_05426243.1| peptide chain release factor 2 [Enterococcus faecalis T2] gi|256619256|ref|ZP_05476102.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200] gi|256853316|ref|ZP_05558686.1| peptide chain release factor 2 [Enterococcus faecalis T8] gi|256959169|ref|ZP_05563340.1| peptide chain release factor 2 [Enterococcus faecalis DS5] gi|256964932|ref|ZP_05569103.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704] gi|257084989|ref|ZP_05579350.1| peptide chain release factor 2 [Enterococcus faecalis Fly1] gi|257087047|ref|ZP_05581408.1| peptide chain release factor 2 [Enterococcus faecalis D6] gi|257419489|ref|ZP_05596483.1| peptide chain release factor [Enterococcus faecalis T11] gi|257422371|ref|ZP_05599361.1| peptide chain release factor [Enterococcus faecalis X98] gi|307273028|ref|ZP_07554274.1| peptide chain release factor 2 [Enterococcus faecalis TX0855] gi|307275776|ref|ZP_07556915.1| peptide chain release factor 2 [Enterococcus faecalis TX2134] gi|307277873|ref|ZP_07558957.1| peptide chain release factor 2 [Enterococcus faecalis TX0860] gi|307291799|ref|ZP_07571670.1| peptide chain release factor 2 [Enterococcus faecalis TX0411] gi|312951693|ref|ZP_07770588.1| peptide chain release factor 2 [Enterococcus faecalis TX0102] gi|229305085|gb|EEN71081.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200] gi|229309284|gb|EEN75271.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322] gi|255963562|gb|EET96038.1| peptide chain release factor 2 [Enterococcus faecalis T1] gi|255968529|gb|EET99151.1| peptide chain release factor 2 [Enterococcus faecalis T2] gi|256598783|gb|EEU17959.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200] gi|256711775|gb|EEU26813.1| peptide chain release factor 2 [Enterococcus faecalis T8] gi|256949665|gb|EEU66297.1| peptide chain release factor 2 [Enterococcus faecalis DS5] gi|256955428|gb|EEU72060.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704] gi|256993019|gb|EEU80321.1| peptide chain release factor 2 [Enterococcus faecalis Fly1] gi|256995077|gb|EEU82379.1| peptide chain release factor 2 [Enterococcus faecalis D6] gi|257161317|gb|EEU91277.1| peptide chain release factor [Enterococcus faecalis T11] gi|257164195|gb|EEU94155.1| peptide chain release factor [Enterococcus faecalis X98] gi|306497065|gb|EFM66611.1| peptide chain release factor 2 [Enterococcus faecalis TX0411] gi|306505270|gb|EFM74456.1| peptide chain release factor 2 [Enterococcus faecalis TX0860] gi|306507468|gb|EFM76599.1| peptide chain release factor 2 [Enterococcus faecalis TX2134] gi|306510013|gb|EFM79037.1| peptide chain release factor 2 [Enterococcus faecalis TX0855] gi|310630410|gb|EFQ13693.1| peptide chain release factor 2 [Enterococcus faecalis TX0102] gi|315027919|gb|EFT39851.1| peptide chain release factor 2 [Enterococcus faecalis TX2137] gi|315029504|gb|EFT41436.1| peptide chain release factor 2 [Enterococcus faecalis TX4000] gi|315031977|gb|EFT43909.1| peptide chain release factor 2 [Enterococcus faecalis TX0017] gi|315037173|gb|EFT49105.1| peptide chain release factor 2 [Enterococcus faecalis TX0027] gi|315145002|gb|EFT89018.1| peptide chain release factor 2 [Enterococcus faecalis TX2141] gi|315152286|gb|EFT96302.1| peptide chain release factor 2 [Enterococcus faecalis TX0031] gi|315156087|gb|EFU00104.1| peptide chain release factor 2 [Enterococcus faecalis TX0043] gi|315158272|gb|EFU02289.1| peptide chain release factor 2 [Enterococcus faecalis TX0312] gi|315167276|gb|EFU11293.1| peptide chain release factor 2 [Enterococcus faecalis TX1341] gi|315169439|gb|EFU13456.1| peptide chain release factor 2 [Enterococcus faecalis TX1342] gi|315174820|gb|EFU18837.1| peptide chain release factor 2 [Enterococcus faecalis TX1346] gi|323480920|gb|ADX80359.1| peptide chain release factor 2 [Enterococcus faecalis 62] gi|327535327|gb|AEA94161.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF] Length = 327 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 170/320 (53%), Positives = 217/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E + Sbjct: 3 EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE F+ Sbjct: 63 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322 >gi|304311879|ref|YP_003811477.1| Peptide chain release factor 2 [gamma proteobacterium HdN1] gi|301797612|emb|CBL45833.1| Peptide chain release factor 2 [gamma proteobacterium HdN1] Length = 300 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 164/296 (55%), Positives = 219/296 (73%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I + RL LL++ +EE+D S+L + + I+ +V +F + SGE D+N Sbjct: 2 VGTIDSVSTRLRGARELLDMVVEENDESMLGDVQKEIDGIEADVAKMEFRRMFSGETDAN 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 YL++ AG+GGTE+QDWA+MLLRMY RW E FKTE +E+ GE AGIKSAT+ ++G Sbjct: 62 SCYLDIQAGSGGTEAQDWADMLLRMYLRWGEDHGFKTELVEVSAGEVAGIKSATIHLEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I IEI+ +D ++DTYRA Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIHIEINPADLKVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SA+RITH+P+G+VVQCQ +RSQHKN+ QA LR+KLYE+E+QKR Sbjct: 182 SGAGGQHVNRTESAIRITHVPSGIVVQCQSDRSQHKNRDQAMKQLRSKLYEMEMQKRYVE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E SK +IGWG QIRSYVL + VKDLRTN+E ++ VLDG++D F+KA+L Sbjct: 242 KMRQEDSKMDIGWGSQIRSYVLDQSR-VKDLRTNVETSNTEAVLDGEIDLFIKASL 296 >gi|304439754|ref|ZP_07399652.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371741|gb|EFM25349.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 368 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 175/348 (50%), Positives = 233/348 (66%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 +N L D D +L LN K + W + A+ ++E H + I +K + D + Sbjct: 19 VNSLIESMDIDGMKAKLRDLNDKQMEEGFWDDTESAQKTIKEFNHYNRKIENLKSLTDEI 78 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 LLE+ E D S ++ D+L +++ E + +LL+ + D ND L++HAGAG Sbjct: 79 SSLKDLLEIMEMEGDYSSYKDFKDDLIKLEKHAEDFKIATLLNDKYDDNDVILQIHAGAG 138 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+MLLRMYTR+ E++ F E L++ +EAGIKSATLLIKG + YG+LKGE+G Sbjct: 139 GTEAQDWASMLLRMYTRYCEQKGFSAEILDLQKEDEAGIKSATLLIKGDSCYGYLKGEKG 198 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DSN RRHTSFSS+ VYP ++D +++I D +IDTYR+SGAGGQHVNTT Sbjct: 199 VHRLVRISPFDSNKRRHTSFSSVDVYPELEDVEDVDIKPEDLKIDTYRSSGAGGQHVNTT 258 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTGVVVQCQ ERSQ +N+ A +L+AKL L ++++E + ++I Sbjct: 259 DSAVRITHIPTGVVVQCQNERSQIQNRETAMKLLKAKLISLAQEEQKEAIEDLSGNYSQI 318 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY MVKD RTN E V+DG+LD F+ A L K Sbjct: 319 AWGSQIRSYVFQPYTMVKDHRTNEEIGDVESVMDGNLDPFINAYLQSK 366 >gi|300860397|ref|ZP_07106484.1| peptide chain release factor 2, programmed frameshift [Enterococcus faecalis TUSoD Ef11] gi|300849436|gb|EFK77186.1| peptide chain release factor 2, programmed frameshift [Enterococcus faecalis TUSoD Ef11] Length = 366 Score = 341 bits (875), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 170/320 (53%), Positives = 217/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E + Sbjct: 42 EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 101 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE F+ Sbjct: 102 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 161 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 162 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 221 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 222 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 281 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN E Sbjct: 282 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 341 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 342 TGNVQAVMDGDLDGFIDAYL 361 >gi|21242619|ref|NP_642201.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri str. 306] gi|21108083|gb|AAM36737.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri str. 306] Length = 329 Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 171/317 (53%), Positives = 225/317 (70%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W + A+ L RER L+ + I ++ L D LLELA E D +L Sbjct: 1 MWNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDN 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + VE +F+ + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE Sbjct: 61 YQAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P Sbjct: 121 MEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 181 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL + +KDLRT IE++ Sbjct: 241 NAMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSD 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD+F++A+L Sbjct: 300 TQKVLDGDLDEFVEASL 316 >gi|219682342|ref|YP_002468726.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219622075|gb|ACL30231.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Length = 349 Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 161/345 (46%), Positives = 239/345 (69%), Gaps = 1/345 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 L G+FD++ R+ ++ + P W I K L +E+ L++ I I EI++ + + Sbjct: 4 ILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKE 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +I LELA+E D + +E+ +Q+I+ E++ +F + S + D D Y+++ +G+GGT Sbjct: 64 VVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKDDHYDCYIDIQSGSGGT 123 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ++QDW+ MLLRMY RWA+K+ F TE ++ GE GIKS+T+ + G A+GW + E G+H Sbjct: 124 DAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RL+R SP+DS RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+S Sbjct: 184 RLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTES 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT +V QCQ RSQHKNK QA +++KLYE++++K++E E +K++I W Sbjct: 244 AVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITW 303 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSY+L + +KDLRT +EK VLDGDLDDF++ +L + Sbjct: 304 GNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347 >gi|315634626|ref|ZP_07889910.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC 33393] gi|315476574|gb|EFU67322.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC 33393] Length = 325 Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 173/321 (53%), Positives = 231/321 (71%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P +W + +A+ L +ER L+ ++ IK ++ L D LLELA+E D E Sbjct: 2 EQPDVWNDADKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAVA 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L ++ ++ +F + SGE D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + F Sbjct: 62 ELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 KTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ + Sbjct: 122 KTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQH Sbjct: 182 VYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNK QA L+AKLYELELQK+ E +K++IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDGDLD F++A+L Sbjct: 301 ENRNTQAVLDGDLDRFIEASL 321 >gi|257090077|ref|ZP_05584438.1| peptide chain release factor [Enterococcus faecalis CH188] gi|312903512|ref|ZP_07762692.1| peptide chain release factor 2 [Enterococcus faecalis TX0635] gi|256998889|gb|EEU85409.1| peptide chain release factor [Enterococcus faecalis CH188] gi|310633388|gb|EFQ16671.1| peptide chain release factor 2 [Enterococcus faecalis TX0635] gi|315162421|gb|EFU06438.1| peptide chain release factor 2 [Enterococcus faecalis TX0645] gi|315577792|gb|EFU89983.1| peptide chain release factor 2 [Enterococcus faecalis TX0630] Length = 327 Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 170/320 (53%), Positives = 217/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E + Sbjct: 3 EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE F+ Sbjct: 63 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322 >gi|108562592|ref|YP_626908.1| peptide chain release factor 2 [Helicobacter pylori HPAG1] gi|122386784|sp|Q1CUY8|RF2_HELPH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|107836365|gb|ABF84234.1| peptide chain release factor RF-2 [Helicobacter pylori HPAG1] Length = 363 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 179/337 (53%), Positives = 241/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPTLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|256762748|ref|ZP_05503328.1| peptide chain release factor 2 [Enterococcus faecalis T3] gi|257079206|ref|ZP_05573567.1| peptide chain release factor 2 [Enterococcus faecalis JH1] gi|294779419|ref|ZP_06744820.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1] gi|307269575|ref|ZP_07550914.1| peptide chain release factor 2 [Enterococcus faecalis TX4248] gi|307289302|ref|ZP_07569258.1| peptide chain release factor 2 [Enterococcus faecalis TX0109] gi|256683999|gb|EEU23694.1| peptide chain release factor 2 [Enterococcus faecalis T3] gi|256987236|gb|EEU74538.1| peptide chain release factor 2 [Enterococcus faecalis JH1] gi|294453548|gb|EFG21949.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1] gi|306500011|gb|EFM69372.1| peptide chain release factor 2 [Enterococcus faecalis TX0109] gi|306514195|gb|EFM82771.1| peptide chain release factor 2 [Enterococcus faecalis TX4248] gi|315147459|gb|EFT91475.1| peptide chain release factor 2 [Enterococcus faecalis TX4244] gi|315163916|gb|EFU07933.1| peptide chain release factor 2 [Enterococcus faecalis TX1302] Length = 327 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 170/320 (53%), Positives = 217/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E + Sbjct: 3 EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELEER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE F+ Sbjct: 63 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322 >gi|317010450|gb|ADU84197.1| peptide chain release factor 2 [Helicobacter pylori SouthAfrica7] Length = 363 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 176/334 (52%), Positives = 238/334 (71%), Gaps = 2/334 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ +D L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVELFELAQNDN 90 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D L + ++ V+ + E +LSGE D+++A + + GAGGTESQDWA++L RM Sbjct: 91 DEVTLSLLYEEALVLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQDWASILYRM 150 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D+N+ Sbjct: 151 YLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVRISPFDANA 210 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PTG+V Sbjct: 211 KRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPTGIV 270 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL PY Sbjct: 271 VQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVLAPY 328 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 Q VKD R+NI ++ +LDGD+D ++ L K Sbjct: 329 QQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|210134369|ref|YP_002300808.1| peptide chain release factor 2 [Helicobacter pylori P12] gi|238054483|sp|B6JPR7|RF2_HELP2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|210132337|gb|ACJ07328.1| peptide chain release factor RF-2 [Helicobacter pylori P12] Length = 363 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 240/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ +D L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKDSLDESVELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPTLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ + K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQN--STKNEEKSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|332307386|ref|YP_004435237.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174715|gb|AEE23969.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 365 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 183/343 (53%), Positives = 237/343 (69%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 L G D+D +RL +N + E P +W A+ L +E+ L+ + I ++ D Sbjct: 20 SLRGYLDYDQKSERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLEQGCVD 79 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+EE D E +L + ++E +F + SG D+ND Y+++ +G+GGT Sbjct: 80 VEELLELAVEESDQDTFDEAEKDLAELVAKLETLEFRRMFSGPNDANDGYIDIQSGSGGT 139 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA+MLLRMY RW E FKTE +E+ DG+ AGIKSAT+ +G A+GWL+ E GVH Sbjct: 140 EAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRTETGVH 199 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS SRRHTSF+S++ YP +DD IEI+I SD RIDTYRASGAGGQHVN TDS Sbjct: 200 RLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHVNRTDS 259 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH PT +VVQCQ +RSQHKNKAQA L+AKLYE E+QK+ E E SK++IGW Sbjct: 260 AVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQNMEDSKSDIGW 319 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 320 GSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIQASL 361 >gi|210620542|ref|ZP_03292090.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275] gi|210155256|gb|EEA86262.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275] Length = 349 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 170/345 (49%), Positives = 245/345 (71%), Gaps = 3/345 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + +++ E W++ A +++E + L + +++Q L D +L Sbjct: 3 LFDIERLKEKIIENEQDMERQDFWEDNENAHKVLQENKKLCETVEKFEQLQKNLEDIEVL 62 Query: 73 LELALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +EL LEEDD I +E SD++ ++K ++ ++LLSGE D N+A + ++AG GG ++Q Sbjct: 63 IELGLEEDDSEDIEKEVSDSINQLKDVIDEMTIQTLLSGEYDKNNAIVSINAGTGGLDAQ 122 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RWAE R +K + L++ EAGIK+A +LI+G NAYG+LKGE+GVHR+V Sbjct: 123 DWAQMLLRMYIRWAEGRDYKVKLLDLISDPEAGIKTAVMLIQGDNAYGYLKGEKGVHRIV 182 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+D + +RHTSF+S+ V P +D++IE+EI++SD +IDTYRASGAGGQHVNTTDSAVR Sbjct: 183 RISPFDPSGKRHTSFASVDVIPELDENIEVEINQSDLKIDTYRASGAGGQHVNTTDSAVR 242 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310 ITH+PTG+ VQCQ ERSQH N+ A ML AKL ++ E++++E+I ++ + T+I WG Sbjct: 243 ITHLPTGITVQCQNERSQHLNREVAMRMLMAKLIDIKEMEQKEKIEDL-QGKYTQITWGS 301 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYV QPY+MVKD RTN E + V++G++D F+ + L KK Sbjct: 302 QIRSYVFQPYKMVKDHRTNTETGNVDAVMNGNIDIFINSYLTRKK 346 >gi|225025532|ref|ZP_03714724.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC 23834] gi|224941678|gb|EEG22887.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC 23834] Length = 367 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 166/338 (49%), Positives = 235/338 (69%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 27 LDYDGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKVLEGIVLTLDNIAGGIDDNRLLI 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++ALEE D +++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 87 DMALEEGDEDSFAAIEEDVAELEKQMAELEFKRMFNQPADVNNCFIDITAGAGGTEAEDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY R+ E++ FK E +E DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 147 AGMLLRMYVRYGERKGFKVEIMEQDDGEIAGINRATIRLEGEYAYGLLRTETGVHRLVRH 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DT+RASGAGGQH+N TDSAVR+T Sbjct: 207 SPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTFRASGAGGQHINKTDSAVRMT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VVQ Q RSQH N+ MLRAKL+ELE++KR E E K+++GWG QIR Sbjct: 267 HIPTGIVVQSQNSRSQHDNRRVCEEMLRAKLFELEMRKRNEEKQALEEGKSDVGWGSQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRT+ E + VLDGDLDDF++A+L Sbjct: 327 SYVLDSSR-IKDLRTSHETGNTKAVLDGDLDDFIEASL 363 >gi|119470492|ref|ZP_01613195.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium TW-7] gi|119446193|gb|EAW27470.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium TW-7] Length = 283 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 163/280 (58%), Positives = 209/280 (74%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +LELA+E +D E + L+ + ++E +F + SG D+NDAYL++ +G+GGTE+Q Sbjct: 1 MLELAIEAEDKDTFDEANAELEGLNEQLESLEFRRMFSGTHDANDAYLDLQSGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW NMLLRMY RW E + FK E +E DG+ AGIK AT+ G AYGWL+ E GVHRLV Sbjct: 61 DWCNMLLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFVGEYAYGWLRTETGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS+ RRHTSF+S +VYP +DD+IEI+I+ SD RID YRASGAGGQHVNTT+SAVR Sbjct: 121 RKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPSDLRIDVYRASGAGGQHVNTTESAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ ERSQHKNKAQA L+AKL+ELELQ++ E +K++IGWG Q Sbjct: 181 ITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQEDAKSDIGWGSQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG+LD F++A+L Sbjct: 241 IRSYVLDDSR-IKDLRTGVENRNTQSVLDGNLDKFIEASL 279 >gi|56421641|ref|YP_148959.1| peptide chain release factor 2 in translation [Geobacillus kaustophilus HTA426] gi|56381483|dbj|BAD77391.1| peptide chain release factor 2 in translation [Geobacillus kaustophilus HTA426] Length = 327 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 174/324 (53%), Positives = 230/324 (70%), Gaps = 4/324 (1%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSDN 91 P+ W + A+ ++ E L + + +++R DNL + EL EE D + E + Sbjct: 4 PNFWDDQKSAQAVISEANALKDLVEEFSSLEERF-DNLEVTYELLKEEPDDELQAELVEE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +++ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ FK Sbjct: 63 AKKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S V Sbjct: 123 VETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEIEI + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ K Sbjct: 183 VPELDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ +A NML+AKLY+ +L++++ E+A + + EIGWG QIRSYV PY +VKD RTN+ Sbjct: 243 NREKAMNMLKAKLYQKKLEEQQAELAEL-RGEQKEIGWGNQIRSYVFHPYSLVKDHRTNV 301 Query: 331 EKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 302 EVGNVQAVMDGEIDVFIDAYLRAK 325 >gi|188534903|ref|YP_001908700.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis Et1/99] gi|188029945|emb|CAO97829.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis Et1/99] Length = 300 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 209/280 (74%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E +D E L + ++ +F + SGE DS D Y+++ AG+GGTE+Q Sbjct: 18 LLELAVEAEDEETFNEAVAELDGLDKKLAELEFRRMFSGEYDSADCYMDIQAGSGGTEAQ 77 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE + FKTE +E DGE AG KSAT+ I G A+GWL+ E GVHRLV Sbjct: 78 DWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLV 137 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 138 RKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 197 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ E +K++IGWG Q Sbjct: 198 ITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQ 257 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 258 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 296 >gi|312901832|ref|ZP_07761097.1| peptide chain release factor 2 [Enterococcus faecalis TX0470] gi|311291025|gb|EFQ69581.1| peptide chain release factor 2 [Enterococcus faecalis TX0470] Length = 327 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 170/320 (53%), Positives = 217/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E + Sbjct: 3 EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE F+ Sbjct: 63 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQVQRSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322 >gi|15611227|ref|NP_222878.1| peptide chain release factor 2 [Helicobacter pylori J99] gi|7388058|sp|Q9ZMR1|RF2_HELPJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|4154673|gb|AAD05740.1| PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2) [Helicobacter pylori J99] Length = 363 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 241/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + +++++ L +++ L ELA + Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKMKNSLDESVELFELAQNDS 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPTLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE++ FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERKSFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|317181479|dbj|BAJ59263.1| peptide chain release factor 2 [Helicobacter pylori F57] Length = 381 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 179/337 (53%), Positives = 240/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ HL+ + ++ ++ L ++ L ELA ++ Sbjct: 49 QELERIEKEQEDPNFWQDVLKARDTNKEKVHLNRLLETYQKTKNSLDESTELFELAQNDN 108 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 109 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 165 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 166 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 225 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 226 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 285 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 286 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNTAKNEE--KSEIGWGHQIRSYVL 343 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 344 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380 >gi|315127590|ref|YP_004069593.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913] gi|315016104|gb|ADT69442.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913] Length = 300 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 168/292 (57%), Positives = 211/292 (72%), Gaps = 9/292 (3%) Query: 68 DNLI--------LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 DNL+ L+ELA+E +D E L + ++E +F + SG DSNDAYL Sbjct: 6 DNLVAGTDDVEGLVELAVEAEDQDTFDEAQSELADLNQQLEGLEFRRMFSGSHDSNDAYL 65 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 ++ +G+GGTE+QDW N+LLRMY RW E + FK E +E DG+ AGIK AT+ G AYG Sbjct: 66 DLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFSGEYAYG 125 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 WL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP VDD+IEI+I+ SD RID YRASGAG Sbjct: 126 WLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDINPSDLRIDVYRASGAG 185 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVNTT+SAVRITH+PT VVQCQ ERSQHKNKAQA L+AKL+ELELQ++ Sbjct: 186 GQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQSQ 245 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 246 EDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 296 >gi|257416283|ref|ZP_05593277.1| peptide chain release factor 2 [Enterococcus faecalis AR01/DG] gi|257158111|gb|EEU88071.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG] Length = 327 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 170/320 (53%), Positives = 217/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E + Sbjct: 3 EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE F+ Sbjct: 63 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 183 MPELDDTIEIAINLDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322 >gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 375 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 174/330 (52%), Positives = 223/330 (67%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L K DP LW + +AK + ++R L + ++ L D L+EL EE Sbjct: 34 RLLSLIEKANDPKLWDSPDQAKNVTQKRNELQMKLDPWLGLKKELLDFPDLIELTSEEMG 93 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 S L+ +D+ R+ E Q LSG+ D A++ +H GAGGTESQDWA+MLLRMY Sbjct: 94 ESGLKSLNDDFDRMFESFENLQMLDALSGKDDGKAAFINIHPGAGGTESQDWADMLLRMY 153 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TR+AE++ ++ E ++ GE AGIK+ATL I+G + +G+LK E GVHRLVRISP+DSN R Sbjct: 154 TRFAEQKGYRAELVDYQPGETAGIKNATLYIQGDHPFGYLKCESGVHRLVRISPFDSNKR 213 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF+S++V P VDD I++ I E D R+D YR+SGAGGQHVNTTDSAVRITHIPTGVVV Sbjct: 214 RHTSFASVYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHIPTGVVV 273 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ A ML+A+LYE+E QK EE K +I WG QIRSYV PY Sbjct: 274 SCQMERSQIKNRDTAMKMLKARLYEMEKQKAEEENAKKAGEKRDIAWGSQIRSYVFHPYN 333 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +VKD RT+ E + V+DGDL+DF+ A L Sbjct: 334 LVKDHRTDFETGNVHAVMDGDLEDFIIAYL 363 >gi|157373979|ref|YP_001472579.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3] gi|157316353|gb|ABV35451.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3] Length = 352 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 173/341 (50%), Positives = 233/341 (68%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL + + E +W N A+ L +ER L+ + I ++ L D Sbjct: 9 GGIFDYDAKKERLEEVCAELESAEVWSNPENAQALGKERSSLEVIVKTIDDMDSGLEDVQ 68 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+ELA+EEDD + S L ++ +E +F + SG D D YL++ +G+GGTE+ Sbjct: 69 DLVELAVEEDDEETFDDASTELDGLEKRLEELEFRRMFSGPHDVADCYLDIQSGSGGTEA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWANM+LRM+ RW + +K E +E+ DG+ AGIK AT+ G A+G L+ E GVHRL Sbjct: 129 QDWANMVLRMFLRWGDAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRL 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+ Sbjct: 189 VRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E SK++IGWG Sbjct: 249 RITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDSKSDIGWGS 308 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 309 QIRSYVLDDAR-IKDLRTGVESRNTQSVLDGDLDKFIEASL 348 >gi|167032113|ref|YP_001667344.1| peptide chain release factor 2 [Pseudomonas putida GB-1] gi|166858601|gb|ABY97008.1| peptide chain release factor 2 [Pseudomonas putida GB-1] Length = 304 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 167/300 (55%), Positives = 221/300 (73%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + ++ + L D LL++A+EE+D + + + L+ ++ + +F + SGE Sbjct: 2 LAQVVETLDKLSNGLGDCQDLLDMAVEENDENAVGDVVAELEELEENLAKLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ Sbjct: 62 MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E SK++IGWG QIRSYVL + +KDLRT +E++ VLDGDLD +++A+L Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDQYLEASL 300 >gi|160876721|ref|YP_001556037.1| peptide chain release factor 2 [Shewanella baltica OS195] gi|160862243|gb|ABX50777.1| peptide chain release factor 2 [Shewanella baltica OS195] Length = 352 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 174/342 (50%), Positives = 234/342 (68%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E +W + A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 348 >gi|213969083|ref|ZP_03397222.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas syringae pv. tomato T1] gi|213926081|gb|EEB59637.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas syringae pv. tomato T1] Length = 280 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 160/277 (57%), Positives = 212/277 (76%), Gaps = 1/277 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ AG+GGTE+QDWA Sbjct: 1 MSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 N+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ E GVHRLVR S Sbjct: 61 NILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 121 PFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E +K++IGWG QIRS Sbjct: 181 VPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL + +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 241 YVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASL 276 >gi|310766541|gb|ADP11491.1| peptide chain release factor 2 [Erwinia sp. Ejp617] Length = 300 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 209/280 (74%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E +D E L + ++ +F + SGE DS D Y+++ AG+GGTE+Q Sbjct: 18 LLELAVEAEDEETFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQ 77 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE + FKTE +E DGE AG KSAT+ I G A+GWL+ E GVHRLV Sbjct: 78 DWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLV 137 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 138 RKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 197 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ E +K++IGWG Q Sbjct: 198 ITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQ 257 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 258 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 296 >gi|229525316|ref|ZP_04414721.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426] gi|229338897|gb|EEO03914.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426] Length = 299 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 167/289 (57%), Positives = 214/289 (74%), Gaps = 2/289 (0%) Query: 64 DRLCDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 DR D++ LLELA+E +D E L + +E +F + SG+ DS+D YL++ Sbjct: 8 DRGVDDVEGLLELAIEAEDQETFDEIGPELDELGARLEQLEFRRMFSGDHDSSDCYLDLQ 67 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ Sbjct: 68 AGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLR 127 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQH Sbjct: 128 TETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQH 187 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E + Sbjct: 188 VNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDA 247 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 248 KSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 295 >gi|226945982|ref|YP_002801055.1| peptide chain release factor 2 [Azotobacter vinelandii DJ] gi|226720909|gb|ACO80080.1| peptide chain release factor 2 [Azotobacter vinelandii DJ] Length = 280 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 162/277 (58%), Positives = 214/277 (77%), Gaps = 1/277 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A+EE+D + + ++R++ +E +F + SGE D+ +AYL+V AG+GGTE+QDWA Sbjct: 1 MAVEENDEGAANDVAAEVERLRGILEKLEFRRMFSGEMDARNAYLDVQAGSGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 NMLLRMY RWA+K F TE +E+ +GE AGIKSAT+ ++G A+GWL+ E GVHRLVR S Sbjct: 61 NMLLRMYLRWADKHGFDTEIVELSEGEVAGIKSATVHVRGEYAFGWLRTEIGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS +RRHTSFS+++ P VDD+IEI+I+ +D R+DTYR+SGAGGQHVNTTDSAVRITH Sbjct: 121 PFDSGNRRHTSFSAVFASPEVDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PT VV CQ ERSQH N+ +A MLRAKLYELE+ KR A E +K++IGWG QIRS Sbjct: 181 LPTNTVVSCQNERSQHANRDRAMKMLRAKLYELEVMKRNVAAQALEDTKSDIGWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL + +KDLRT IE ++ VLDGDLD+F++A+L Sbjct: 241 YVLDQSR-IKDLRTGIENSNCDAVLDGDLDEFIEASL 276 >gi|87120696|ref|ZP_01076589.1| peptide chain release factor 2, programmed frameshift [Marinomonas sp. MED121] gi|86163924|gb|EAQ65196.1| peptide chain release factor 2, programmed frameshift [Marinomonas sp. MED121] Length = 293 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 160/286 (55%), Positives = 214/286 (74%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D LL++A+EEDD ++ + L+ ++ ++ +F + S E D +A+L++ AG+ Sbjct: 5 LVDAKELLDMAVEEDDEDSVEAVTMELEELEAQLSKLEFRRMFSQEMDPTNAFLDIQAGS 64 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWANMLLRMY RW E + FK E +E+ G+ AGIKSAT+ +G A+GWL+ E Sbjct: 65 GGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSAGDVAGIKSATIRFEGEYAFGWLRTET 124 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS SRRHTSF+S+++ P +DD++EI+I+ +D R DTYR+SGAGGQHVNT Sbjct: 125 GVHRLVRKSPFDSGSRRHTSFASVFLSPEIDDNVEIDINPADLRTDTYRSSGAGGQHVNT 184 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITHIPTG+VVQCQ +RSQH N+ A LRAKLYE E+QKR E A E +K++ Sbjct: 185 TDSAVRITHIPTGIVVQCQNQRSQHANRDFAMKQLRAKLYEFEMQKRTEAAQAVEDTKSD 244 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IGWG QIRSYVL + +KDLRT +E ++ VLDG+LD F+ A+L Sbjct: 245 IGWGSQIRSYVLDSSR-IKDLRTGVESSNTGAVLDGNLDQFIVASL 289 >gi|254479978|ref|ZP_05093226.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2148] gi|214039540|gb|EEB80199.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2148] Length = 310 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 163/305 (53%), Positives = 217/305 (71%), Gaps = 1/305 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 RER L+ + I++++ D LLE+A EDD L E + + ++E +F Sbjct: 3 RERSSLETIVLTIEKLEGGATDAADLLEMAAAEDDQDTLTEVISEIDALVAQLERLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + GE D+N+A+L++ +G+GGTE+QDWA M+LRMY RW E + FKT+ +E G+ AGIK Sbjct: 63 MFDGEMDANNAFLDIQSGSGGTEAQDWAEMMLRMYLRWGEAKGFKTQLMEASAGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHTSFSS++V P +DD+IEIEI+ + Sbjct: 123 SATIKFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIEIEINPA 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+DTYRASGAGGQHVN TDSAVR+TH PTG+ VQCQ ERSQH+N+ A +LRAKLYE Sbjct: 183 DLRVDTYRASGAGGQHVNKTDSAVRLTHNPTGIAVQCQTERSQHQNRDNAMKLLRAKLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E+ KR E E K +IGWG QIRSYVL + +KDLRT +E + VLDG LD F Sbjct: 243 MEMLKRNEEKQAMEDGKADIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGSLDQF 301 Query: 347 MKATL 351 ++A+L Sbjct: 302 IEASL 306 >gi|325922147|ref|ZP_08183937.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas gardneri ATCC 19865] gi|325547382|gb|EGD18446.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas gardneri ATCC 19865] Length = 329 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 170/317 (53%), Positives = 226/317 (71%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W + A+ L RER L+ + I ++ L D LLELA E D +L + Sbjct: 1 MWNDSERAQALGRERSMLEKTVIGIADVLAGLADAADLLELAESEQDEDTAVAVLADLDK 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ VE +F+ + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE Sbjct: 61 YQVHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ GE AGIKSAT+ I+G YGWLK E GVHRLVR SP+DS++RRHTSF+S++V P Sbjct: 121 MEVSGGEVAGIKSATIRIEGEFVYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 181 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL + +KDLRT IE++ Sbjct: 241 NAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSD 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD+F++A+L Sbjct: 300 TQKVLDGDLDEFVEASL 316 >gi|256006007|ref|ZP_05430946.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360] gi|281417086|ref|ZP_06248106.1| peptide chain release factor 2 [Clostridium thermocellum JW20] gi|255990030|gb|EEU00173.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360] gi|281408488|gb|EFB38746.1| peptide chain release factor 2 [Clostridium thermocellum JW20] Length = 357 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 169/343 (49%), Positives = 235/343 (68%), Gaps = 2/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD + ++ L K +P W + ++ ++++ + L + + ++ + D + Sbjct: 4 GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L EL +EE D S++ E + + K E E + E+LL+G+ D N+A L +HAGAGGTE+ Sbjct: 64 TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ML RMYTRWAEK+ F + L+ DGEEAGIKS T + G NAYG+LK E+GVHRL Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D++ RRHTSF+S+ V P ++D IE+ I+ D RIDTYR+SGAGGQH+N T+SAV Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309 RITHIPTG+VV CQ ERSQ +NK A ML+AKL EL E + +E+I ++ + + EI WG Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDL-KGIQLEIAWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV PY +VKD RTN E+ + V+DG+LD F+ + L+ Sbjct: 303 SQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345 >gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC] gi|330825983|ref|YP_004389286.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans K601] gi|317116757|gb|ADU99245.1| Peptide chain release factor 2 [Alicycliphilus denitrificans BC] gi|329311355|gb|AEB85770.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans K601] Length = 367 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 172/338 (50%), Positives = 233/338 (68%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +RL +N EDP++W + +A+ L +E++ LD + ++++ L DN L Sbjct: 27 LDYDAKYERLRTVNASLEDPNVWNDPKKAQELGKEKKLLDGVVLTLQKLTAELADNAELY 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E++ EE D + L ++ +E +F + S EAD + Y+++ AGAGGTE+ DW Sbjct: 87 EMSREEGDEAGLLAIEGEAAKLLPLIEELEFRRMFSKEADPLNCYIDIQAGAGGTEACDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLR Y ++AE++ FK E G+ AGIKSAT+ I+G AYG L+ E GVHRLVR Sbjct: 147 AGMLLRQYLKYAERKGFKATVDEETPGDVAGIKSATIHIEGEYAYGLLRTETGVHRLVRK 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS+ RHTSF+S++VYP VDDSIEI I+ +D R DTYRASGAGGQH+N TDSAVR+T Sbjct: 207 SPFDSSGGRHTSFASLFVYPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VVQCQ RSQH N+ AW LR+KLYE E+QKR E +KT++GWG QIR Sbjct: 267 HIPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGHQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 327 SYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363 >gi|86147405|ref|ZP_01065718.1| peptide chain release factor 2 [Vibrio sp. MED222] gi|218708550|ref|YP_002416171.1| peptide chain release factor 2 [Vibrio splendidus LGP32] gi|85834833|gb|EAQ52978.1| peptide chain release factor 2 [Vibrio sp. MED222] gi|218321569|emb|CAV17521.1| Peptide chain release factor 2 [Vibrio splendidus LGP32] Length = 303 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 160/280 (57%), Positives = 211/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+EE+D E L ++ ++E +F + SG+ D++D Y+++ +G+GGTE+Q Sbjct: 21 LLELAVEEEDQETFDEIEPELAELEAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQ 80 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW +M+LRMY RWA+ + FKTE +E+ DG+ AG+K AT+ I G AYGWL+ E GVHRLV Sbjct: 81 DWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKGATVRISGEYAYGWLRTETGVHRLV 140 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS+ RRHTSF+S ++YP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SAVR Sbjct: 141 RKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSDLRIDVYRASGAGGQHVNTTESAVR 200 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ +RSQHKNK QA LRAKL+ELE+QK+ E +K++IGWG Q Sbjct: 201 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQASEETKSDIGWGSQ 260 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 261 IRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 299 >gi|227518951|ref|ZP_03949000.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104] gi|227553571|ref|ZP_03983620.1| peptide chain release factor RF2 [Enterococcus faecalis HH22] gi|256961736|ref|ZP_05565907.1| peptide chain release factor 2 [Enterococcus faecalis Merz96] gi|293383442|ref|ZP_06629355.1| peptide chain release factor 2 [Enterococcus faecalis R712] gi|293388904|ref|ZP_06633389.1| peptide chain release factor 2 [Enterococcus faecalis S613] gi|312907729|ref|ZP_07766720.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512] gi|312910347|ref|ZP_07769194.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516] gi|227073640|gb|EEI11603.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104] gi|227177301|gb|EEI58273.1| peptide chain release factor RF2 [Enterococcus faecalis HH22] gi|256952232|gb|EEU68864.1| peptide chain release factor 2 [Enterococcus faecalis Merz96] gi|291079233|gb|EFE16597.1| peptide chain release factor 2 [Enterococcus faecalis R712] gi|291081685|gb|EFE18648.1| peptide chain release factor 2 [Enterococcus faecalis S613] gi|310626757|gb|EFQ10040.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512] gi|311289620|gb|EFQ68176.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516] gi|315576028|gb|EFU88219.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B] gi|315580603|gb|EFU92794.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A] Length = 327 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 169/320 (52%), Positives = 217/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A+ L+ E L ++ + + + ++ EL EE D I +E + Sbjct: 3 EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQEEYDAEIQEELEER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE F+ Sbjct: 63 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322 >gi|125972886|ref|YP_001036796.1| peptide chain release factor 2 [Clostridium thermocellum ATCC 27405] gi|125713111|gb|ABN51603.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium thermocellum ATCC 27405] Length = 357 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 169/343 (49%), Positives = 235/343 (68%), Gaps = 2/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD + ++ L K +P W + ++ ++++ + L + + ++ + D + Sbjct: 4 GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L EL +EE D S++ E + + K E E + E+LL+G+ D N+A L +HAGAGGTE+ Sbjct: 64 TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNALLTLHAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ML RMYTRWAEK+ F + L+ DGEEAGIKS T + G NAYG+LK E+GVHRL Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D++ RRHTSF+S+ V P ++D IE+ I+ D RIDTYR+SGAGGQH+N T+SAV Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309 RITHIPTG+VV CQ ERSQ +NK A ML+AKL EL E + +E+I ++ + + EI WG Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDL-KGIQLEIAWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV PY +VKD RTN E+ + V+DG+LD F+ + L+ Sbjct: 303 SQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345 >gi|329120730|ref|ZP_08249392.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC BAA-1200] gi|327460527|gb|EGF06863.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC BAA-1200] Length = 417 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 167/338 (49%), Positives = 234/338 (69%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ +RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 77 MDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKLLEGVVLTLDNIGGGIEDNRMLI 136 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+A+EE+D ++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 137 EMAVEENDEDGFAAIESDVAELESQMAGLEFKRMFNQPADHNNCFVDITAGAGGTEAEDW 196 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ FK E +E DGE AGI ATL ++G AYG L+ E GVHRLVR Sbjct: 197 AGMLFRMYSRYAERKGFKLEIIEEDDGEIAGINRATLRVEGEYAYGLLRTETGVHRLVRY 256 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH+N TDSAVRIT Sbjct: 257 SPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQHINKTDSAVRIT 316 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VVQ Q RSQH+N+ MLR+KL+ELE++KR E E K ++GWG QIR Sbjct: 317 HIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEGKADVGWGSQIR 376 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 377 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 413 >gi|308182345|ref|YP_003926472.1| peptide chain release factor 2 [Helicobacter pylori PeCan4] gi|308064530|gb|ADO06422.1| peptide chain release factor 2 [Helicobacter pylori PeCan4] Length = 363 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 179/337 (53%), Positives = 241/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESIELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|109946962|ref|YP_664190.1| peptide chain release factor 2 [Helicobacter acinonychis str. Sheeba] gi|123066315|sp|Q17YT5|RF2_HELAH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|109714183|emb|CAJ99191.1| peptide chain release factor RF-2 [Helicobacter acinonychis str. Sheeba] Length = 363 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 242/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q+L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L +++ L E+A ++ Sbjct: 31 QKLERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNALDESVELFEIAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPILEHGVQKVE---IEIMLSGEHDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|34496516|ref|NP_900731.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC 12472] gi|34102370|gb|AAQ58736.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC 12472] Length = 299 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 161/274 (58%), Positives = 211/274 (77%), Gaps = 2/274 (0%) Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EEDD +IL +D L+ ++ +V +F + D + ++++ AGAGGTE+QDWA ML Sbjct: 24 EEDDDTILAVQAD-LEEVEAKVAQLEFRRMFHDPMDPTNCFIDIQAGAGGTEAQDWAGML 82 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 LRMYTR+AE++ FK + LE+ +GE AG+ SATL I+G AYG L+ E GVHRLVR+SP+D Sbjct: 83 LRMYTRYAERKGFKVDVLELSEGEVAGVTSATLKIEGEYAYGLLRTEVGVHRLVRVSPFD 142 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 SN+RRHTSFSS++VYP VDDS EI+I+ +D R DTYRASGAGGQH+N TDSAVR+THIPT Sbjct: 143 SNARRHTSFSSVFVYPEVDDSFEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPT 202 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQH+N+ +AW MLRAKLYELEL+KR E E +KT++GWG QIRSYV Sbjct: 203 GIVVQCQNDRSQHRNRDEAWQMLRAKLYELELKKRNEAKQALEDTKTDVGWGHQIRSYVF 262 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +KDLRT+ E + V+DGDLD F++A+L Sbjct: 263 DQSR-IKDLRTSYEVGNIKGVMDGDLDGFIEASL 295 >gi|307636860|gb|ADN79310.1| hypothetical protein hp908_0179 [Helicobacter pylori 908] gi|325995449|gb|ADZ50854.1| Peptide chain release factor 2 [Helicobacter pylori 2018] gi|325997047|gb|ADZ49255.1| Peptide chain release factor 2 [Helicobacter pylori 2017] Length = 363 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 179/337 (53%), Positives = 241/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|117921735|ref|YP_870927.1| peptide chain release factor 2 [Shewanella sp. ANA-3] gi|117614067|gb|ABK49521.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. ANA-3] Length = 352 Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 173/342 (50%), Positives = 235/342 (68%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL ++ + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDAGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ET+ L ++ + +F + SG+ D++D YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGQHDASDCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDKFIEASL 348 >gi|119947032|ref|YP_944712.1| peptide chain release factor 2 [Psychromonas ingrahamii 37] gi|119865636|gb|ABM05113.1| bacterial peptide chain release factor 2 (bRF-2) [Psychromonas ingrahamii 37] Length = 329 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 166/321 (51%), Positives = 222/321 (69%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P +W A+ L +ER L+ + I + D L+L+E+A EE+D E Sbjct: 6 ESPEVWSEPERAQALGKERSALELVVDTIDALSAGTEDILMLVEMATEENDQDSFDEAQK 65 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + ++ ++E +F + SG D+ YL++ +G+GGTE+QDWAN+LLRMY RW E + Sbjct: 66 EVNELEKKLEVLEFRRMFSGNHDACSCYLDIQSGSGGTEAQDWANILLRMYLRWGEAHGY 125 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 KTE +E+ G+ AGIK AT+ G A+GWL+ E GVHRLVR SP+DS+ RRHTSF+S + Sbjct: 126 KTELMEVSAGDVAGIKGATIRFTGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFASAF 185 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 +YP ++D I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQH Sbjct: 186 IYPEIEDDIDIQINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQH 245 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNK QA L+AKLYE ELQK+ I E SK++IGWG QIRSYVL + +KDLRT I Sbjct: 246 KNKDQAMKQLKAKLYEHELQKQNAEKQISEDSKSDIGWGSQIRSYVLDDAR-IKDLRTGI 304 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDG LD F++A+L Sbjct: 305 ESRNTQAVLDGGLDKFIEASL 325 >gi|226953405|ref|ZP_03823869.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244] gi|294651888|ref|ZP_06729178.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC 19194] gi|226835836|gb|EEH68219.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244] gi|292822211|gb|EFF81124.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC 19194] Length = 297 Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 163/292 (55%), Positives = 212/292 (72%), Gaps = 5/292 (1%) Query: 64 DRLCDNL----ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 DRL + L +L+LA+E DD S+L + L + + +F + S D N +L Sbjct: 3 DRLAEQLDDAKAMLDLAVEADDESLLLDVQAELDSAEQALGNLEFRRMFSNPMDPNPCFL 62 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIKSAT+ + G AYG Sbjct: 63 EIQSGSGGTEAQDWASMLLRMYLRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAYG 122 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 WL+ E GVHRLVR SP+DSN+ RHTSFS++++ P +DD+IEI+I+ SD R DTYRASGAG Sbjct: 123 WLRTESGVHRLVRKSPFDSNNNRHTSFSAVFISPEIDDNIEIDINPSDVRTDTYRASGAG 182 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKLYELE+ KR E A Sbjct: 183 GQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQAL 242 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 243 EDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTKAVLDGDLDKFIEASL 293 >gi|294142345|ref|YP_003558323.1| peptide chain release factor 2 [Shewanella violacea DSS12] gi|293328814|dbj|BAJ03545.1| peptide chain release factor 2 [Shewanella violacea DSS12] Length = 352 Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 168/345 (48%), Positives = 234/345 (67%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GG FD+D +RL ++ + E+ +W + A+ L +ER L+ + I ++ L Sbjct: 5 LLAFGGFFDYDAKKERLEEVSRELENSDVWNDPDNAQALGKERAALELIVKTIDDMDTGL 64 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LL+LA+EE D + S L ++ +E +F + SG D ++YL++ +G+G Sbjct: 65 EDVEGLLDLAIEEGDEDTFNDASAELDDLEKRLEDLEFRRMFSGPHDIANSYLDIQSGSG 124 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWANM+LRMY RW E +K E +E+ G+ AGIK AT+ G A+G L+ E G Sbjct: 125 GTEAQDWANMVLRMYLRWGEAHDYKPELIEVTAGDVAGIKGATIKFNGEYAFGSLRTETG 184 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQH+N T Sbjct: 185 VHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHINKT 244 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SA+RITH+PT VVQCQ +RSQHKN+ A L+AKL+ELE+ K+ + E +K++I Sbjct: 245 ESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLFELEMLKQNQEKQAAEDAKSDI 304 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 305 GWGSQIRSYVLDDAR-IKDLRTGVESRNTQTVLDGGLDMFIQASL 348 >gi|325916711|ref|ZP_08178968.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas vesicatoria ATCC 35937] gi|325537060|gb|EGD08799.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas vesicatoria ATCC 35937] Length = 329 Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 170/317 (53%), Positives = 226/317 (71%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W + A+ L RER L+ + I ++ L D LL+LA E D +L + Sbjct: 1 MWNDAERAQALGRERSMLEKTVIGIADVLAGLTDAGELLDLADSEQDEDTAVAVIADLDK 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + VE +F+ + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE Sbjct: 61 YQAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P Sbjct: 121 MEVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 181 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL + +KDLRT IE++ Sbjct: 241 NAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSD 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD+F++A+L Sbjct: 300 TQKVLDGDLDEFVEASL 316 >gi|85859385|ref|YP_461587.1| peptide chain release factor 2 [Syntrophus aciditrophicus SB] gi|85722476|gb|ABC77419.1| bacterial peptide Chain Release Factor 2 (RF-2) [Syntrophus aciditrophicus SB] Length = 279 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 159/277 (57%), Positives = 209/277 (75%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EE+D L+ S++++ ++ V + + +L E D +A + +HAGAGGTE+QDW Sbjct: 1 MAKEENDEEALEAISNDIESLRKSVRESELKMMLGSEQDPMNAIVSIHAGAGGTEAQDWV 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RWAEKR FKT ++ G+EAG+KS + I+G AYG+ K E G+HRLVRIS Sbjct: 61 EMLLRMYLRWAEKRGFKTTIIDYLPGDEAGVKSVSFTIEGEYAYGYAKAEIGIHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D++SRRHTSF+S++VYP V+D I +EI E D RIDTYR++GAGGQHVN TDSAVRITH Sbjct: 121 PFDASSRRHTSFASVFVYPEVNDEIVVEIDEKDLRIDTYRSTGAGGQHVNKTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PTG+VVQCQ ERSQHKNKA A LR++LYEL++Q++ E + +K +I WG QIRS Sbjct: 181 MPTGIVVQCQNERSQHKNKAMAMKYLRSRLYELKIQEQNEKLSEINKTKKDIAWGSQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVLQPY+MVKD RTNIE + VLDGD+DD ++A L Sbjct: 241 YVLQPYKMVKDHRTNIEIGNVGRVLDGDIDDLIEAYL 277 >gi|333000723|gb|EGK20298.1| peptide chain release factor 2 [Shigella flexneri K-272] gi|333015221|gb|EGK34563.1| peptide chain release factor 2 [Shigella flexneri K-227] Length = 293 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 167/280 (59%), Positives = 205/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELNALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|291531340|emb|CBK96925.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium siraeum 70/3] Length = 370 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 170/348 (48%), Positives = 233/348 (66%), Gaps = 4/348 (1%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +L L G D DN ++ L ++ P W +V ++ + ++ N + +++++ Sbjct: 17 ELKELAGALDLDNLKTEIAKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRES 76 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 D + +LELA EEDD S+L E + + + E+E ++ +LLSGE D N+A L HAGA Sbjct: 77 YDDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGA 136 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDW ML RMY WAE+ K L+ DGEEAGIKSA++L++G NAYG+LK E Sbjct: 137 GGTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSEN 196 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN Sbjct: 197 GVHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNK 256 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSK 303 T SAVRITHIPTG+V CQ ERSQH+N+ A ML++KL LE+++RE + I + + Sbjct: 257 TSSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKL--LEIKEREHLDKISDIKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV PY MVKD RT E + V+DGDLD F+ A L Sbjct: 315 LQIAWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYL 362 >gi|160902329|ref|YP_001567910.1| peptide chain release factor 2 [Petrotoga mobilis SJ95] gi|189040002|sp|A9BHH8|RF2_PETMO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|160359973|gb|ABX31587.1| peptide chain release factor 2 [Petrotoga mobilis SJ95] Length = 366 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 175/352 (49%), Positives = 240/352 (68%), Gaps = 6/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +F+ D + + L+ + +P+ W + AK + + Q+L + I K+ Sbjct: 12 ELKENFEDLKDVFNIDKVEEEVKKLDKEMMEPNFWNDQNRAKKISKMAQNLKDEIDEFKK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ + I +EL+ EDD S+ + L+ I+ ++ + LLS E D +A+L + Sbjct: 72 LENDFEELEIAVELS--EDDPSMTAQVEAILKVIEKKIGSFRLRMLLSEEYDDANAFLSL 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWA+K + E ++ +G+EAGIKSAT+ I GP AYG L Sbjct: 130 HPGAGGTESQDWASMLLRMYTRWADKNNYDIETIDFQEGDEAGIKSATIKISGPYAYGKL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+N RRHTSF+SI V P D+++EIEI+ D +IDTYR+ GAGGQ Sbjct: 190 KYESGVHRLVRISPFDANGRRHTSFASISVMPEFDENVEIEINPDDLKIDTYRSGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIG 299 HVN TDSAVRITH+PTG+VV Q ERSQH+NKA A +L+AKLYELE QK+ E++ G Sbjct: 250 HVNKTDSAVRITHLPTGIVVAVQNERSQHQNKATALKILKAKLYELEHQKKLEEKLRLRG 309 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E +I WG QIRSYVL PY +VKDLRT E ++ VLDG++D+F++ L Sbjct: 310 EVK--DISWGNQIRSYVLYPYTLVKDLRTEYETSNAQAVLDGEIDEFIEEEL 359 >gi|84393962|ref|ZP_00992702.1| peptide chain release factor 2 [Vibrio splendidus 12B01] gi|84375406|gb|EAP92313.1| peptide chain release factor 2 [Vibrio splendidus 12B01] Length = 303 Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 211/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+EE+D E L ++ ++E +F + +G+ D++D Y+++ +G+GGTE+Q Sbjct: 21 LLELAVEEEDQETFDEIEPELAELEAKLEKLEFRRMFAGDHDASDCYIDLQSGSGGTEAQ 80 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW +M+LRMY RWA+ + FKTE +E+ DG+ AG+K AT+ I G AYGWL+ E GVHRLV Sbjct: 81 DWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKGATVRISGEYAYGWLRTETGVHRLV 140 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS+ RRHTSF+S ++YP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SAVR Sbjct: 141 RKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSDLRIDVYRASGAGGQHVNTTESAVR 200 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ +RSQHKNK QA LRAKL+ELE+QK+ E +K++IGWG Q Sbjct: 201 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQASEETKSDIGWGSQ 260 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 261 IRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 299 >gi|330807738|ref|YP_004352200.1| peptide chain release factor 2 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375846|gb|AEA67196.1| Putative Peptide chain release factor 2 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 293 Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 164/286 (57%), Positives = 213/286 (74%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D LL++A+EE+D + + L R+ + +F + SGE D N+AYL++ AG+ Sbjct: 5 LADCRDLLDMAVEENDEGAVGDVVAELTRLDENLAKLEFRRMFSGEMDMNNAYLDIQAGS 64 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ E Sbjct: 65 GGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEI 124 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNT Sbjct: 125 GVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNT 184 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E +K++ Sbjct: 185 TDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSD 244 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IGWG QIRSYVL + +KDLRT+IE++ VLDGD+D+++ A+L Sbjct: 245 IGWGHQIRSYVLDASR-IKDLRTSIERSDCDKVLDGDIDEYLIASL 289 >gi|82545486|ref|YP_409433.1| peptide chain release factor RF-2 [Shigella boydii Sb227] gi|82778343|ref|YP_404692.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197] gi|110643039|ref|YP_670769.1| peptide chain release factor 2 [Escherichia coli 536] gi|117625122|ref|YP_854110.1| peptide chain release factor 2 [Escherichia coli APEC O1] gi|195936508|ref|ZP_03081890.1| hypothetical protein EscherichcoliO157_08602 [Escherichia coli O157:H7 str. EC4024] gi|209920345|ref|YP_002294429.1| peptide chain release factor 2 [Escherichia coli SE11] gi|217327359|ref|ZP_03443442.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. TW14588] gi|227888439|ref|ZP_04006244.1| peptide chain release factor 2 [Escherichia coli 83972] gi|237706466|ref|ZP_04536947.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA] gi|254037934|ref|ZP_04871992.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43] gi|256019311|ref|ZP_05433176.1| peptide chain release factor 2 [Shigella sp. D9] gi|256024599|ref|ZP_05438464.1| peptide chain release factor 2 [Escherichia sp. 4_1_40B] gi|261226204|ref|ZP_05940485.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. FRIK2000] gi|261256541|ref|ZP_05949074.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str. FRIK966] gi|293406389|ref|ZP_06650315.1| peptide chain release factor 2 [Escherichia coli FVEC1412] gi|293412249|ref|ZP_06654972.1| peptide chain release factor 2 [Escherichia coli B354] gi|293416144|ref|ZP_06658784.1| peptide chain release factor 2 [Escherichia coli B185] gi|298382125|ref|ZP_06991722.1| peptide chain release factor 2 [Escherichia coli FVEC1302] gi|300815658|ref|ZP_07095882.1| peptide chain release factor 2 [Escherichia coli MS 107-1] gi|300820694|ref|ZP_07100845.1| peptide chain release factor 2 [Escherichia coli MS 119-7] gi|300896214|ref|ZP_07114763.1| peptide chain release factor 2 [Escherichia coli MS 198-1] gi|300906560|ref|ZP_07124251.1| peptide chain release factor 2 [Escherichia coli MS 84-1] gi|300921222|ref|ZP_07137595.1| peptide chain release factor 2 [Escherichia coli MS 115-1] gi|300925129|ref|ZP_07141043.1| peptide chain release factor 2 [Escherichia coli MS 182-1] gi|300928174|ref|ZP_07143716.1| peptide chain release factor 2 [Escherichia coli MS 187-1] gi|300936044|ref|ZP_07150992.1| peptide chain release factor 2 [Escherichia coli MS 21-1] gi|300947611|ref|ZP_07161783.1| peptide chain release factor 2 [Escherichia coli MS 116-1] gi|300954270|ref|ZP_07166733.1| peptide chain release factor 2 [Escherichia coli MS 175-1] gi|300980316|ref|ZP_07174970.1| peptide chain release factor 2 [Escherichia coli MS 45-1] gi|300995678|ref|ZP_07181206.1| peptide chain release factor 2 [Escherichia coli MS 200-1] gi|301027417|ref|ZP_07190754.1| peptide chain release factor 2 [Escherichia coli MS 69-1] gi|301027812|ref|ZP_07191117.1| peptide chain release factor 2 [Escherichia coli MS 196-1] gi|301049326|ref|ZP_07196296.1| peptide chain release factor 2 [Escherichia coli MS 185-1] gi|301303048|ref|ZP_07209175.1| peptide chain release factor 2 [Escherichia coli MS 124-1] gi|301327291|ref|ZP_07220547.1| peptide chain release factor 2 [Escherichia coli MS 78-1] gi|301643760|ref|ZP_07243798.1| peptide chain release factor 2 [Escherichia coli MS 146-1] gi|306812207|ref|ZP_07446405.1| peptide chain release factor 2 [Escherichia coli NC101] gi|307139578|ref|ZP_07498934.1| peptide chain release factor 2 [Escherichia coli H736] gi|307310490|ref|ZP_07590138.1| peptide chain release factor 2 [Escherichia coli W] gi|309785302|ref|ZP_07679933.1| peptide chain release factor 2 [Shigella dysenteriae 1617] gi|309793962|ref|ZP_07688387.1| peptide chain release factor 2 [Escherichia coli MS 145-7] gi|312964850|ref|ZP_07779090.1| peptide chain release factor 2 [Escherichia coli 2362-75] gi|312972868|ref|ZP_07787041.1| peptide chain release factor 2 [Escherichia coli 1827-70] gi|331643580|ref|ZP_08344711.1| peptide chain release factor 2 [Escherichia coli H736] gi|331648636|ref|ZP_08349724.1| peptide chain release factor 2 [Escherichia coli M605] gi|331654388|ref|ZP_08355388.1| peptide chain release factor 2 [Escherichia coli M718] gi|331659020|ref|ZP_08359962.1| peptide chain release factor 2 [Escherichia coli TA206] gi|331664463|ref|ZP_08365369.1| peptide chain release factor 2 [Escherichia coli TA143] gi|331669625|ref|ZP_08370471.1| peptide chain release factor 2 [Escherichia coli TA271] gi|331678877|ref|ZP_08379551.1| peptide chain release factor 2 [Escherichia coli H591] gi|331684516|ref|ZP_08385108.1| peptide chain release factor 2 [Escherichia coli H299] gi|81242491|gb|ABB63201.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197] gi|81246897|gb|ABB67605.1| peptide chain release factor RF-2 [Shigella boydii Sb227] gi|110344631|gb|ABG70868.1| peptide chain release factor 2 [Escherichia coli 536] gi|115514246|gb|ABJ02321.1| peptide chain release factor 2 [Escherichia coli APEC O1] gi|209913604|dbj|BAG78678.1| peptide chain release factor 2 [Escherichia coli SE11] gi|217319726|gb|EEC28151.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. TW14588] gi|226839558|gb|EEH71579.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43] gi|226899506|gb|EEH85765.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA] gi|227834708|gb|EEJ45174.1| peptide chain release factor 2 [Escherichia coli 83972] gi|281179896|dbj|BAI56226.1| peptide chain release factor 2 [Escherichia coli SE15] gi|281602223|gb|ADA75207.1| Peptide chain release factor 2 [Shigella flexneri 2002017] gi|284922839|emb|CBG35928.1| peptide chain release factor 2 (RF-2) [Escherichia coli 042] gi|291426395|gb|EFE99427.1| peptide chain release factor 2 [Escherichia coli FVEC1412] gi|291432333|gb|EFF05315.1| peptide chain release factor 2 [Escherichia coli B185] gi|291469020|gb|EFF11511.1| peptide chain release factor 2 [Escherichia coli B354] gi|298277265|gb|EFI18781.1| peptide chain release factor 2 [Escherichia coli FVEC1302] gi|299879074|gb|EFI87285.1| peptide chain release factor 2 [Escherichia coli MS 196-1] gi|300298925|gb|EFJ55310.1| peptide chain release factor 2 [Escherichia coli MS 185-1] gi|300304786|gb|EFJ59306.1| peptide chain release factor 2 [Escherichia coli MS 200-1] gi|300318731|gb|EFJ68515.1| peptide chain release factor 2 [Escherichia coli MS 175-1] gi|300359948|gb|EFJ75818.1| peptide chain release factor 2 [Escherichia coli MS 198-1] gi|300394925|gb|EFJ78463.1| peptide chain release factor 2 [Escherichia coli MS 69-1] gi|300401599|gb|EFJ85137.1| peptide chain release factor 2 [Escherichia coli MS 84-1] gi|300409324|gb|EFJ92862.1| peptide chain release factor 2 [Escherichia coli MS 45-1] gi|300411828|gb|EFJ95138.1| peptide chain release factor 2 [Escherichia coli MS 115-1] gi|300418731|gb|EFK02042.1| peptide chain release factor 2 [Escherichia coli MS 182-1] gi|300452808|gb|EFK16428.1| peptide chain release factor 2 [Escherichia coli MS 116-1] gi|300458836|gb|EFK22329.1| peptide chain release factor 2 [Escherichia coli MS 21-1] gi|300463814|gb|EFK27307.1| peptide chain release factor 2 [Escherichia coli MS 187-1] gi|300526958|gb|EFK48027.1| peptide chain release factor 2 [Escherichia coli MS 119-7] gi|300531587|gb|EFK52649.1| peptide chain release factor 2 [Escherichia coli MS 107-1] gi|300841712|gb|EFK69472.1| peptide chain release factor 2 [Escherichia coli MS 124-1] gi|300846154|gb|EFK73914.1| peptide chain release factor 2 [Escherichia coli MS 78-1] gi|301077859|gb|EFK92665.1| peptide chain release factor 2 [Escherichia coli MS 146-1] gi|305854245|gb|EFM54683.1| peptide chain release factor 2 [Escherichia coli NC101] gi|306909385|gb|EFN39880.1| peptide chain release factor 2 [Escherichia coli W] gi|307554867|gb|ADN47642.1| peptide chain release factor RF-2 [Escherichia coli ABU 83972] gi|307625536|gb|ADN69840.1| peptide chain release factor 2 [Escherichia coli UM146] gi|308122369|gb|EFO59631.1| peptide chain release factor 2 [Escherichia coli MS 145-7] gi|308926422|gb|EFP71898.1| peptide chain release factor 2 [Shigella dysenteriae 1617] gi|310332810|gb|EFQ00024.1| peptide chain release factor 2 [Escherichia coli 1827-70] gi|312290406|gb|EFR18286.1| peptide chain release factor 2 [Escherichia coli 2362-75] gi|313647930|gb|EFS12376.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T] gi|315062195|gb|ADT76522.1| peptide chain release factor RF-2 [Escherichia coli W] gi|315256773|gb|EFU36741.1| peptide chain release factor 2 [Escherichia coli MS 85-1] gi|315289447|gb|EFU48842.1| peptide chain release factor 2 [Escherichia coli MS 110-3] gi|315293877|gb|EFU53229.1| peptide chain release factor 2 [Escherichia coli MS 153-1] gi|315295678|gb|EFU54998.1| peptide chain release factor 2 [Escherichia coli MS 16-3] gi|315614954|gb|EFU95592.1| peptide chain release factor 2 [Escherichia coli 3431] gi|320175922|gb|EFW51000.1| peptide chain release factor 2 [Shigella dysenteriae CDC 74-1112] gi|320182207|gb|EFW57110.1| peptide chain release factor 2 [Shigella boydii ATCC 9905] gi|320184566|gb|EFW59367.1| peptide chain release factor 2 [Shigella flexneri CDC 796-83] gi|320189234|gb|EFW63893.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. EC1212] gi|320195009|gb|EFW69638.1| peptide chain release factor 2 [Escherichia coli WV_060327] gi|320202550|gb|EFW77120.1| peptide chain release factor 2 [Escherichia coli EC4100B] gi|320640534|gb|EFX10073.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. G5101] gi|320645781|gb|EFX14766.1| peptide chain release factor 2 [Escherichia coli O157:H- str. 493-89] gi|320651081|gb|EFX19521.1| peptide chain release factor 2 [Escherichia coli O157:H- str. H 2687] gi|320656577|gb|EFX24473.1| peptide chain release factor 2 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662097|gb|EFX29498.1| peptide chain release factor 2 [Escherichia coli O55:H7 str. USDA 5905] gi|320667172|gb|EFX34135.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. LSU-61] gi|323154771|gb|EFZ40969.1| peptide chain release factor 2 [Escherichia coli EPECa14] gi|323162519|gb|EFZ48369.1| peptide chain release factor 2 [Escherichia coli E128010] gi|323167904|gb|EFZ53594.1| peptide chain release factor 2 [Shigella sonnei 53G] gi|323173888|gb|EFZ59517.1| peptide chain release factor 2 [Escherichia coli LT-68] gi|323180334|gb|EFZ65886.1| peptide chain release factor 2 [Escherichia coli 1180] gi|323183444|gb|EFZ68841.1| peptide chain release factor 2 [Escherichia coli 1357] gi|323188711|gb|EFZ73996.1| peptide chain release factor 2 [Escherichia coli RN587/1] gi|323935878|gb|EGB32177.1| peptide chain release 2 [Escherichia coli E1520] gi|323941589|gb|EGB37769.1| peptide chain release [Escherichia coli E482] gi|323946624|gb|EGB42647.1| peptide chain release 2 [Escherichia coli H120] gi|323951671|gb|EGB47546.1| peptide chain release [Escherichia coli H252] gi|323957389|gb|EGB53111.1| peptide chain release [Escherichia coli H263] gi|323960813|gb|EGB56434.1| peptide chain release [Escherichia coli H489] gi|323966691|gb|EGB62123.1| peptide chain release [Escherichia coli M863] gi|323971672|gb|EGB66901.1| peptide chain release [Escherichia coli TA007] gi|323978818|gb|EGB73899.1| peptide chain release [Escherichia coli TW10509] gi|324005542|gb|EGB74761.1| peptide chain release factor 2 [Escherichia coli MS 57-2] gi|324011760|gb|EGB80979.1| peptide chain release factor 2 [Escherichia coli MS 60-1] gi|324017287|gb|EGB86506.1| peptide chain release factor 2 [Escherichia coli MS 117-3] gi|324115093|gb|EGC09058.1| peptide chain release [Escherichia fergusonii B253] gi|324119931|gb|EGC13810.1| peptide chain release [Escherichia coli E1167] gi|325498452|gb|EGC96311.1| peptide chain release factor 2 [Escherichia fergusonii ECD227] gi|326339026|gb|EGD62841.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1044] gi|326343092|gb|EGD66860.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1125] gi|327251653|gb|EGE63339.1| peptide chain release factor 2 [Escherichia coli STEC_7v] gi|331037051|gb|EGI09275.1| peptide chain release factor 2 [Escherichia coli H736] gi|331042383|gb|EGI14525.1| peptide chain release factor 2 [Escherichia coli M605] gi|331047770|gb|EGI19847.1| peptide chain release factor 2 [Escherichia coli M718] gi|331053602|gb|EGI25631.1| peptide chain release factor 2 [Escherichia coli TA206] gi|331058394|gb|EGI30375.1| peptide chain release factor 2 [Escherichia coli TA143] gi|331063293|gb|EGI35206.1| peptide chain release factor 2 [Escherichia coli TA271] gi|331073707|gb|EGI45028.1| peptide chain release factor 2 [Escherichia coli H591] gi|331078131|gb|EGI49337.1| peptide chain release factor 2 [Escherichia coli H299] gi|332086815|gb|EGI91951.1| peptide chain release factor 2 [Shigella boydii 5216-82] gi|332087643|gb|EGI92770.1| peptide chain release factor 2 [Shigella dysenteriae 155-74] gi|332090885|gb|EGI95976.1| peptide chain release factor 2 [Shigella boydii 3594-74] gi|332344786|gb|AEE58120.1| peptide chain release factor protein PrfB [Escherichia coli UMNK88] gi|332752927|gb|EGJ83311.1| peptide chain release factor 2 [Shigella flexneri 4343-70] gi|332753726|gb|EGJ84105.1| peptide chain release factor 2 [Shigella flexneri K-671] gi|332754583|gb|EGJ84949.1| peptide chain release factor 2 [Shigella flexneri 2747-71] gi|332765821|gb|EGJ96034.1| peptide chain release factor 2 [Shigella flexneri 2930-71] gi|332999677|gb|EGK19262.1| peptide chain release factor 2 [Shigella flexneri VA-6] gi|333000272|gb|EGK19855.1| peptide chain release factor 2 [Shigella flexneri K-218] gi|333015042|gb|EGK34385.1| peptide chain release factor 2 [Shigella flexneri K-304] Length = 293 Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 167/280 (59%), Positives = 205/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|157148427|ref|YP_001455746.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895] gi|157085632|gb|ABV15310.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895] Length = 293 Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 167/280 (59%), Positives = 205/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELDTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|315149827|gb|EFT93843.1| peptide chain release factor 2 [Enterococcus faecalis TX0012] Length = 327 Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 169/320 (52%), Positives = 216/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E + Sbjct: 3 EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELEER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE F+ Sbjct: 63 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +ML+AKLY+LE++K+ + A + EI WG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEISWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322 >gi|261409628|ref|YP_003245869.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10] gi|261286091|gb|ACX68062.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10] Length = 331 Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 174/321 (54%), Positives = 226/321 (70%), Gaps = 4/321 (1%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ L+ E + +++ +++Q D ++++ELA EE D S+ E + + Sbjct: 4 PDFWDDNEKAQALIAEMNAVKSSVDQYQKLQADYDDAVVMIELADEEGDDSLAGEIGETI 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + VE + + LL+ D +A LE+H GAGGTESQDW ML RMYTRWAEKR FK Sbjct: 64 KDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKRGFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 124 ETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVV 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P + D +EI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV CQ ERSQ KN Sbjct: 184 PEITDDVEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERSQIKN 243 Query: 273 KAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 + +A MLR+KLYE ++++++ E+A I GE S +I WG QIRSYV PY MVKD RT + Sbjct: 244 RERAMTMLRSKLYERKIEEQQKELAEIRGEQS--DIAWGSQIRSYVFHPYSMVKDHRTQV 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DGDLD F+ L Sbjct: 302 ETGNVGAVMDGDLDGFIDGYL 322 >gi|317013590|gb|ADU81026.1| peptide chain release factor 2 [Helicobacter pylori Gambia94/24] Length = 363 Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 177/337 (52%), Positives = 241/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ ++ K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQ--SSTKNEEKSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|331674375|ref|ZP_08375135.1| peptide chain release factor 2 [Escherichia coli TA280] gi|331068469|gb|EGI39864.1| peptide chain release factor 2 [Escherichia coli TA280] Length = 291 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 167/280 (59%), Positives = 205/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 9 LLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 68 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLV Sbjct: 69 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 128 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 129 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 188 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 189 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 248 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 249 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 287 >gi|315649817|ref|ZP_07902900.1| peptide chain release factor 2 [Paenibacillus vortex V453] gi|315274791|gb|EFU38172.1| peptide chain release factor 2 [Paenibacillus vortex V453] Length = 339 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 175/325 (53%), Positives = 226/325 (69%), Gaps = 4/325 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K P W + +A+ L+ E + +++ +++Q D +++ ELA EE D S+ E Sbjct: 8 KMAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQQDYDDAVVMTELADEEGDDSLAGEI 67 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++ + VE + + LL+ D +A LE+H GAGGTESQDW ML RMYTRWAEKR Sbjct: 68 GETIKDLVKRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKR 127 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 128 GFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 187 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P ++D IE++I D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV CQ ERS Sbjct: 188 CDVVPEINDEIELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERS 247 Query: 269 QHKNKAQAWNMLRAKLYELEL-QKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDL 326 Q KN+ +A MLR+KLYE ++ ++++E+A I GE S EI WG QIRSYV PY M KD Sbjct: 248 QIKNRERAMTMLRSKLYERKIEEQKKELAEIRGEQS--EIAWGSQIRSYVFHPYSMAKDH 305 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351 RT +E + V+DGDLD F+ L Sbjct: 306 RTQVETGNIGAVMDGDLDAFIDGYL 330 >gi|217974576|ref|YP_002359327.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223] gi|254790920|sp|B8E5Q1|RF2_SHEB2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|217499711|gb|ACK47904.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223] Length = 365 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 174/350 (49%), Positives = 237/350 (67%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + L G+FD+D +RL + + E +W + A+ L +ER L+ + I + Sbjct: 13 ELAERTQLLRGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ Sbjct: 73 MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|304437837|ref|ZP_07397786.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369194|gb|EFM22870.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 368 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 175/334 (52%), Positives = 226/334 (67%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++++ L K +P W + A+ L +E L + K + + D L E+ +EE Sbjct: 30 EKIAELEYKMGEPSFWDDAAAAQKLNQELAALKGGVDTYKGLMAKYEDAETLYEMGIEEG 89 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+ + L I +E Q E LLSG+ D+NDA L +HAGAGGTE+QDW MLLRM Sbjct: 90 DASMEDDIRAELDLIAEGLETLQLEVLLSGDYDANDAILTLHAGAGGTEAQDWTQMLLRM 149 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE+ F E ++ G+EAG+KSATL IKG NAYG+LK E+GVHRLVRISP+DS + Sbjct: 150 YGRWAERHGFTVETADLQPGDEAGVKSATLFIKGHNAYGFLKSEKGVHRLVRISPFDSQA 209 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSFS+ V P +DD++E+ I+ D R+D YRASGAGGQH+N T SAVR+TH PTG+V Sbjct: 210 RRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIV 269 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E + +I WG QIRSYV QPY Sbjct: 270 VQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPY 329 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 MVKD+RTN E + V+DG+LD F++A L K Sbjct: 330 TMVKDVRTNAETGNVQAVMDGELDPFIRAYLNAK 363 >gi|229541533|ref|ZP_04430593.1| peptide chain release factor 2 [Bacillus coagulans 36D1] gi|229325953|gb|EEN91628.1| peptide chain release factor 2 [Bacillus coagulans 36D1] Length = 327 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 168/321 (52%), Positives = 227/321 (70%), Gaps = 2/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W + EA+ ++ E L ++ +E++ + D + ELA EE+D + +E Sbjct: 3 EPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTHELAKEENDSELKEELEAE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ ++ + + LL+G D+N+A LE+H GAGGTESQDW +MLLRMYTRW EK+ FK Sbjct: 63 LEAFTEKLNEYELQLLLNGPYDANNAILELHPGAGGTESQDWCSMLLRMYTRWGEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAG+KS TLL KG NAYG+LK E+G+HRLVRISP+D+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGVKSVTLLFKGHNAYGYLKAEKGIHRLVRISPFDAAGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+E+ D R+DTYRASGAGGQH+N T SAVRITHIPTG+VV CQ ERSQ + Sbjct: 183 MPEIDDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVVSCQSERSQIQ 242 Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ QA ML+AKLY+ E++++E ++A I + EIGWG QIRSYV PY MVKD RTN+ Sbjct: 243 NREQAMKMLKAKLYQKEVEEKEKQLAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNV 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DG++D F+ A L Sbjct: 302 ETGNVQAVMDGEIDPFIDAYL 322 >gi|290476399|ref|YP_003469304.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004] gi|289175737|emb|CBJ82540.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004] Length = 286 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 164/280 (58%), Positives = 210/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L++++ ++ +F + SG+ DS + YL++ AG+GGTE+Q Sbjct: 4 LLELAVEADDEETFNEAVAELEQLEEKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQ 63 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RM+ RWAE + FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLV Sbjct: 64 DWASMLMRMFLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLV 123 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 124 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 183 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA L+AKLYELE+QK+ E +K++IGWG Q Sbjct: 184 ITHIPTGLVTQCQNDRSQHKNKDQAMKQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQ 243 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 244 IRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 282 >gi|332978282|gb|EGK15010.1| peptide chain release factor RF2 [Psychrobacter sp. 1501(2011)] Length = 325 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 170/321 (52%), Positives = 226/321 (70%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P LW + A + +E+ LD I+ I ++ L D +LELA+E DD +L + Sbjct: 2 ESPELWNDPERATKISKEKSQLDAIINTITGLETTLEDAAAMLELAVEADDEGLLSDVQQ 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + +VE +F+ + +GE D N+ ++++ +G+GGTE+QDWA MLLRMYTRW E F Sbjct: 62 ELNAAQAQVEDLEFKRMFNGEMDPNNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K + E+ G AG+KSA+ + G A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++ Sbjct: 122 KVDVTEVSAGSVAGVKSASFKVTGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +DD I+I+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH PT VVQCQ ERSQH Sbjct: 182 VSPEIDDDIDIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPTNTVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NKA A MLRAKLYELE+QKR E E +K+++GWG QIRSYVL + +KDLRT + Sbjct: 242 GNKATAMKMLRAKLYELEMQKRMEKQQAVEDNKSDVGWGSQIRSYVLDDSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDGDLD F++A+L Sbjct: 301 ETFNTGAVLDGDLDQFIEASL 321 >gi|317008842|gb|ADU79422.1| peptide chain release factor 2 [Helicobacter pylori India7] Length = 363 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 241/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ + +E+ L+ + ++ ++ L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDINKEKVRLNRLLETYQKTKNALDESVELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|297171258|gb|ADI22265.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF0200_36I24] gi|297171357|gb|ADI22361.1| protein chain release factor B [uncultured nuHF2 cluster bacterium HF0500_02A10] Length = 334 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 163/317 (51%), Positives = 222/317 (70%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W N +A ++ E L N + ++ ++ + + +L EDD + E + + Sbjct: 6 FWDNQDKASEVIAESNRLKNWVKPWHDLNTKVSELTEIRDLLEHEDDEDLTHELISEVDK 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 I+ +E + ++L G D A L VH GAGG ESQDWA ML RMY+RWAE + Sbjct: 66 IEGPIEDLELRTMLQGPDDHRGAILTVHPGAGGLESQDWAEMLTRMYSRWAENHGYDLNV 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L++ G+EAGIKSATL + G +AYG+LK E+G+HRLVRISP+D+ SRRHTSF+S+++YP+ Sbjct: 126 LDMQPGDEAGIKSATLEVVGGHAYGYLKAEKGIHRLVRISPFDAQSRRHTSFASVFIYPL 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD IEIEI+ESD R+DT+RASGAGGQHVN TDSA+RITHIPTG+ V CQQERSQH N+A Sbjct: 186 VDDEIEIEIAESDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIAVSCQQERSQHMNRA 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+A LYE L+++E+ E++KT+IGWG QIRSYV QPY MV D RT+++ + Sbjct: 246 TAMKMLQASLYERALEEKEQEKEAIEATKTDIGWGNQIRSYVFQPYTMVNDHRTDLKISD 305 Query: 335 PSDVLDGDLDDFMKATL 351 + V+DG+LD F++A L Sbjct: 306 VNKVMDGNLDPFIEAYL 322 >gi|222034586|emb|CAP77328.1| Peptide chain release factor 2 [Escherichia coli LF82] Length = 293 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 167/280 (59%), Positives = 205/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|138896684|ref|YP_001127137.1| peptide chain release factor 2, RF-2 [Geobacillus thermodenitrificans NG80-2] gi|134268197|gb|ABO68392.1| Bacterial peptide chain release factor 2, RF-2 [Geobacillus thermodenitrificans NG80-2] Length = 327 Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 177/326 (54%), Positives = 230/326 (70%), Gaps = 8/326 (2%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSDN 91 P W + A+ ++ E L + + + +R DNL + EL EE D + E + Sbjct: 4 PGFWDDQKAAQAIISEANALKELVGEFESLAERF-DNLEVTYELLKEEPDDELQAELVEE 62 Query: 92 LQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + KL ++ QFE LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 63 AK--KLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 KN+ +A NML+AKLY+ ++++++ E+A + + EIGWG QIRSYV PY +VKD RT Sbjct: 241 IKNREKAMNMLKAKLYQKKMEEQQAELAEL-RGEQKEIGWGSQIRSYVFHPYSLVKDHRT 299 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N+E + V+DG++D F+ A L K Sbjct: 300 NVEVGNVQAVMDGEIDVFIDAYLRAK 325 >gi|145297980|ref|YP_001140821.1| peptide chain release factor 2 [Aeromonas salmonicida subsp. salmonicida A449] gi|166223622|sp|A4SJK1|RF2_AERS4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|142850752|gb|ABO89073.1| peptide chain release factor 2 [Aeromonas salmonicida subsp. salmonicida A449] Length = 365 Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 176/350 (50%), Positives = 237/350 (67%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G FD+D +RL +N + E P +W A+ L +ER L+N + I Sbjct: 13 ELSERTELLRGYFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVSLENVVGTIDV 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D +L+ LA+E +D E ++ ++ +F + SG+ D +D Y+++ Sbjct: 73 LTQGAEDVEMLVSLAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDGSDCYIDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW + +K E +E+ DG+ AGIKSAT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIELSDGDVAGIKSATVKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q L+AKLYELE+QK+ E Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 TKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|187932243|ref|YP_001892228.1| peptide chain release factor 2 [Francisella tularensis subsp. mediasiatica FSC147] gi|187713152|gb|ACD31449.1| peptide chain release factor 2 [Francisella tularensis subsp. mediasiatica FSC147] Length = 325 Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 171/321 (53%), Positives = 228/321 (71%), Gaps = 3/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L +++ L+N + + I L LLEL E D S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKE--DESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T+ VLDGDLD F++A+L Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321 >gi|329928717|ref|ZP_08282566.1| peptide chain release factor 2 [Paenibacillus sp. HGF5] gi|328937498|gb|EGG33916.1| peptide chain release factor 2 [Paenibacillus sp. HGF5] Length = 339 Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 174/325 (53%), Positives = 228/325 (70%), Gaps = 4/325 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K P W + +A+ L+ E + +++ +++Q D ++++ELA EE D S+ E Sbjct: 8 KMAAPDFWDDNEKAQALIAEMNSVKSSVDQYQKLQADYDDAVVMIELADEEGDDSLAGEI 67 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++ + VE + + LL+ D +A LE+H GAGGTESQDW ML RMYTRWAEKR Sbjct: 68 GETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKR 127 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 128 GFKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 187 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P ++D +E++I D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV CQ ERS Sbjct: 188 CDVVPEINDEVELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERS 247 Query: 269 QHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDL 326 Q KN+ +A MLR+KLYE ++++++ E+A I GE S +I WG QIRSYV PY MVKD Sbjct: 248 QIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQS--DIAWGSQIRSYVFHPYSMVKDH 305 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351 RT +E + V+DGDLD F+ L Sbjct: 306 RTQVETGNIGAVMDGDLDGFIDGYL 330 >gi|13959455|sp|P57511|RF2_BUCAI RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 365 Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 161/351 (45%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+R++ L D++ R+ ++ + P W I K L +E+ L++ I I EI Sbjct: 14 LNRRVQDLKRYLDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEI 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + + +I LELA+E D + +E+ +Q+I+ E++ +F + S + D D Y+++ Sbjct: 74 EENIKEVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++ GE GIKS+T+ + G A+GW + Sbjct: 134 SGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRL+R SP+DS RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQH Sbjct: 194 TETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +V QCQ RSQHKNK QA +++KLYE++++K++E E + Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++I WG QIRSY+L + +KDLRT +EK VLDGDLDDF++ +L + Sbjct: 314 KSDITWGNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 363 >gi|297379396|gb|ADI34283.1| peptide chain release factor 2 [Helicobacter pylori v225d] Length = 363 Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 240/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D +++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILESVLIAK 362 >gi|329571835|gb|EGG53513.1| peptide chain release factor 2 [Enterococcus faecalis TX1467] Length = 327 Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 169/320 (52%), Positives = 216/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E + Sbjct: 3 EPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELEER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE F+ Sbjct: 63 IHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQ 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRI P+DS RRHTSF S+ V Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRILPFDSAKRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 183 MPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 303 TGNVQAVMDGDLDGFIDAYL 322 >gi|227112636|ref|ZP_03826292.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 293 Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 208/280 (74%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+EEDD +T+ L ++ ++ +F + SG+ DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEEDDEETFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ E GVHRLV Sbjct: 71 DWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 289 >gi|251799706|ref|YP_003014437.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2] gi|247547332|gb|ACT04351.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2] Length = 368 Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 181/356 (50%), Positives = 243/356 (68%), Gaps = 12/356 (3%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++++L L G D D ++ ++ K P W + +A+ ++ E NAI + E Sbjct: 12 EVAKRLQELRGSLDLDLKLEHIANFEEKMTAPDFWDDNTKAQGIISEL----NAIKSVVE 67 Query: 62 IQDRL---CDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 +RL C++L L+ELA EE D S+ E + + +V + + LL+ D +A Sbjct: 68 HYERLNADCEDLQTLIELADEESDDSLEAEVIGGIASLNEKVNGFELQLLLNQPYDKLNA 127 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 LE+H GAGGTESQDWA ML RMYTRWAEKR FK E L+ DG+EAGIKS T+ +KG NA Sbjct: 128 ILELHPGAGGTESQDWAQMLYRMYTRWAEKRGFKVEVLDYLDGDEAGIKSVTIAVKGYNA 187 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+LK E+GVHRLVRISP+DS+ RRHTSF S V P + + IE+EI D ++DTYRASG Sbjct: 188 YGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVVPEITEDIEVEIRTEDLKVDTYRASG 247 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IA 296 AGGQHVN T+SA+RITHIPTG+VV CQQERSQ +N+ +A NMLR+KLYE +++++++ +A Sbjct: 248 AGGQHVNKTESAIRITHIPTGIVVACQQERSQIQNRERAMNMLRSKLYERKIEEQQKHLA 307 Query: 297 NI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I GE S +I WG QIRSYV PY MVKD RT++E + V+DGDLD F+ L Sbjct: 308 EIRGEQS--DIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYL 361 >gi|167750196|ref|ZP_02422323.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702] gi|167656758|gb|EDS00888.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702] gi|291556130|emb|CBL33247.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium siraeum V10Sc8a] Length = 370 Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 170/348 (48%), Positives = 232/348 (66%), Gaps = 4/348 (1%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +L L G D DN + L ++ P W +V ++ + ++ N + +++++ Sbjct: 17 ELKELAGALDLDNLKAEIVKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRES 76 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 D + +LELA EEDD S+L E + + + E+E ++ +LLSGE D N+A L HAGA Sbjct: 77 YDDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGA 136 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDW ML RMY WAE+ K L+ DGEEAGIKSA++L++G NAYG+LK E Sbjct: 137 GGTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSEN 196 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN Sbjct: 197 GVHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNK 256 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSK 303 T SAVRITHIPTG+V CQ ERSQH+N+ A ML++KL LE+++RE + I + + Sbjct: 257 TSSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKL--LEIKEREHLDKISDIKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV PY MVKD RT E + V+DGDLD F+ A L Sbjct: 315 LQIAWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYL 362 >gi|239828320|ref|YP_002950944.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70] gi|239808613|gb|ACS25678.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70] Length = 367 Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 178/354 (50%), Positives = 242/354 (68%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L + G D + R+ L + P+ W + A+ ++ E L + + + Sbjct: 13 KMAKRLAEIRGSLDLETKQARIRELEEQMAAPNFWDDQKAAQTVINEANALKDLVGEFQS 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++R + + EL EE D + QE +++ + + + LL+ D N+A LE+ Sbjct: 73 LEERFENLEVTYELIKEEPDEDLQQELVAEAKKLTKDFSEFELQLLLNEPYDKNNAILEL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+ GEEAG+KS TLLIKG NAYG+L Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D++ RRHTSF S V P +DD IEIEI + ++DTYR+SGAGGQ Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVMPEMDDDIEIEIRPEEIKVDTYRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGE 300 HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ E+A I Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEI-R 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L K Sbjct: 312 GEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365 >gi|121608134|ref|YP_995941.1| peptide chain release factor 2 [Verminephrobacter eiseniae EF01-2] gi|121552774|gb|ABM56923.1| bacterial peptide chain release factor 2 (bRF-2) [Verminephrobacter eiseniae EF01-2] Length = 381 Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 163/341 (47%), Positives = 239/341 (70%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL ++ +DP +W + +A+ L +E++ LD+ +S + ++ L DN Sbjct: 38 GGIFDYDAKFERLRTVDAALQDPAVWNDPKKAQALGKEKKSLDDVVSMLDKLGRELADNT 97 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E++ +E D + L R++ +E +F + S EAD+ + ++++ AGAGGTE+ Sbjct: 98 ELFEMSKQEGDDAGLLALQAEAARLRPGIEQLEFRRMFSKEADALNCFVDIQAGAGGTEA 157 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA MLLR Y R+AE++ FK E G+ AG+KSAT+ ++G AYG L+ E GVHRL Sbjct: 158 CDWAGMLLRQYLRYAERKGFKATVEEETPGDVAGLKSATIKVEGEYAYGLLRTETGVHRL 217 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP +DDSI+I+I+ +D R DT+R+SGAGGQH+N TDSAV Sbjct: 218 VRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTFRSSGAGGQHINKTDSAV 277 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PTG+VVQCQ RSQH N+ AW LR++LY+ E + R++ E SKT++GWG Sbjct: 278 RLTHLPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHERRLRQQEQQKLEDSKTDVGWGH 337 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT++E ++ VLDGDLD F++A L Sbjct: 338 QIRSYVLDNSR-IKDLRTHVEISATQKVLDGDLDAFIEAAL 377 >gi|67461212|sp|Q927Y4|RF2_LISIN RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 366 Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 175/350 (50%), Positives = 228/350 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K ++Q+ G D D+ R++ L + DP+ W + A+ ++ E Sbjct: 12 KTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHA 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ I LEL EE D + E +++ + + + +LS D N+A LE+ Sbjct: 72 LEEEQESMEISLELLKEEADEDLQAELEKDIKAYVATISEFELKLMLSDPYDKNNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDEIEIEVRTEDLKIDTYRATGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E Sbjct: 252 HINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L Sbjct: 312 EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYL 361 >gi|188526975|ref|YP_001909662.1| peptide chain release factor 2 [Helicobacter pylori Shi470] gi|238691887|sp|B2US00|RF2_HELPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|188143215|gb|ACD47632.1| peptide chain release factor 2 [Helicobacter pylori Shi470] gi|308061460|gb|ADO03348.1| peptide chain release factor 2 [Helicobacter pylori Cuz20] Length = 363 Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|88706910|ref|ZP_01104609.1| peptide chain release factor 2 [Congregibacter litoralis KT71] gi|88698832|gb|EAQ95952.1| peptide chain release factor 2 [Congregibacter litoralis KT71] Length = 299 Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 161/296 (54%), Positives = 216/296 (72%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 +S I + D L L+E+A EEDD + + E +Q + +E +F + +GE D N Sbjct: 1 MSSIDALDTGASDTLDLIEMAAEEDDEAAVAELEQEIQGLLKVLEKLEFRRMFNGEMDPN 60 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A+L++ +G+GGTE+QDWA +LLRMY RW E + F TE +E G+ AGIKSAT+ G Sbjct: 61 NAFLDIQSGSGGTEAQDWAEILLRMYLRWGEAKGFSTELIEASGGDVAGIKSATIKFTGE 120 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +DD+IEIEI+ +D R+DTYRA Sbjct: 121 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRA 180 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN TDSAVR+TH P+G+VVQCQ ERSQH+N+ A +LR KLYE+E+ KR E Sbjct: 181 SGAGGQHVNKTDSAVRLTHNPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEILKRNEE 240 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I E +K +IGWG QIRSYVL + +KDLRTN+E ++ VLDGD+D F++A+L Sbjct: 241 KQIMEDNKADIGWGSQIRSYVLDASR-IKDLRTNVETSNTQAVLDGDIDQFIEASL 295 >gi|308183967|ref|YP_003928100.1| peptide chain release factor 2 [Helicobacter pylori SJM180] gi|308059887|gb|ADO01783.1| peptide chain release factor 2 [Helicobacter pylori SJM180] Length = 363 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 240/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|217031931|ref|ZP_03437433.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128] gi|298736886|ref|YP_003729416.1| peptide chain release factor RF-2 [Helicobacter pylori B8] gi|216946400|gb|EEC25005.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128] gi|298356080|emb|CBI66952.1| peptide chain release factor RF-2 [Helicobacter pylori B8] Length = 363 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 240/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L +++ L ELA ++ Sbjct: 31 QELGRIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|196249386|ref|ZP_03148084.1| peptide chain release factor 2 [Geobacillus sp. G11MC16] gi|196211143|gb|EDY05904.1| peptide chain release factor 2 [Geobacillus sp. G11MC16] Length = 327 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 177/326 (54%), Positives = 230/326 (70%), Gaps = 8/326 (2%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSDN 91 P W + A+ ++ E L + + + +R DNL + EL EE D + E + Sbjct: 4 PGFWDDQKAAQAIISEANALKELVGEFESLAERF-DNLEVTYELLKEEPDDELQAELVEE 62 Query: 92 LQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + KL ++ QFE LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 63 AK--KLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 KN+ +A NML+AKLY+ ++++++ E+A + + EIGWG QIRSYV PY +VKD RT Sbjct: 241 IKNREKAINMLKAKLYQKKMEEQQAELAEL-RGEQKEIGWGSQIRSYVFHPYSLVKDHRT 299 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N+E + V+DG++D F+ A L K Sbjct: 300 NVEVGNVQAVMDGEIDVFIDAYLRAK 325 >gi|292669366|ref|ZP_06602792.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541] gi|292649001|gb|EFF66973.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541] Length = 368 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 173/334 (51%), Positives = 228/334 (68%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++++ L K +P W + A+ L +E L + +++ + D L E+ +EE+ Sbjct: 30 EKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYRDLVAKYEDAETLYEMGIEEN 89 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+ + L I +E Q E LLSGE D+NDA L +HAGAGGTE+QDW MLLRM Sbjct: 90 DASMEADIRAELTLISEGLETLQLEVLLSGEYDANDAILTLHAGAGGTEAQDWTQMLLRM 149 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE+ F + ++ G+EAG+KSATL IKG NAYG+LK E+GVHRLVRISP+DS + Sbjct: 150 YGRWAERHGFTVDTADLQPGDEAGVKSATLFIKGHNAYGFLKSEKGVHRLVRISPFDSQA 209 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSFS+ V P +DD++E+ I+ D R+D +RASGAGGQH+N T SAVR+TH PTG+V Sbjct: 210 RRHTSFSACDVMPEIDDAVEVPINMDDVRVDYFRASGAGGQHINKTSSAVRMTHEPTGIV 269 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E + +I WG QIRSYV QPY Sbjct: 270 VQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIARLEGVQQKIEWGSQIRSYVFQPY 329 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 MVKD+RTN E + V+DGD+D F++A L K Sbjct: 330 TMVKDVRTNAETGNVQAVMDGDIDPFIRAYLNAK 363 >gi|16080582|ref|NP_391409.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. 168] gi|6174964|sp|P28367|RF2_BACSU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|2331287|gb|AAC97534.1| release factor 2 [Bacillus subtilis] gi|2618874|gb|AAC67303.1| putative peptide chain release factor RF-2 [Bacillus subtilis] gi|2636055|emb|CAB15546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. 168] Length = 366 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 173/352 (49%), Positives = 232/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ +L G D ++ R++ L+ + DP W + +A+ ++ E L + ++ K++ Sbjct: 13 MASRLADFRGSLDLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDYVNSYKKL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + +L EE D + E L+ + E + + LLS D N+A LE+H Sbjct: 73 NESHEELQMTHDLLKEEPDTDLQLELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDW +MLLRMYTRW E+R FK E L+ G+EAGIKS TLLIKG NAYG+LK Sbjct: 133 PGAGGTESQDWGSMLLRMYTRWGERRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +D I+I+I D ++DTYRASGAGGQH Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VVV CQ ERSQ KN+ +A ML+AKLY+ +++++ + Sbjct: 253 VNTTDSAVRITHLPTNVVVTCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY MVKD RTN E + V+DGD+D F+ A L K Sbjct: 313 QKEIGWGSQIRSYVFHPYSMVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSK 364 >gi|113969170|ref|YP_732963.1| peptide chain release factor 2 [Shewanella sp. MR-4] gi|114048688|ref|YP_739238.1| peptide chain release factor 2 [Shewanella sp. MR-7] gi|113883854|gb|ABI37906.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. MR-4] gi|113890130|gb|ABI44181.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. MR-7] Length = 352 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 172/342 (50%), Positives = 234/342 (68%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL ++ + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ET+ L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDKFIEASL 348 >gi|308063032|gb|ADO04919.1| peptide chain release factor 2 [Helicobacter pylori Sat464] gi|317176986|dbj|BAJ54775.1| peptide chain release factor 2 [Helicobacter pylori F16] Length = 363 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|326564766|gb|EGE14978.1| peptide chain release factor 2 [Moraxella catarrhalis 46P47B1] Length = 304 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 172/300 (57%), Positives = 222/300 (74%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 LD + I + +L D +LELA+E+DD S+L + L VE +F + SGE Sbjct: 2 LDGIVGVIDGLSAKLDDAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D+N+ YL++ +G+GGTE+QDWA MLLRMY RW E FK E LE+ +G AGIKSAT++ Sbjct: 62 MDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIM 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KG A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RID Sbjct: 122 VKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH PTGVVV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R E E SK++IGWG QIRSYVL + +KDLRT +E ++ + VL+GDLD F++A+L Sbjct: 242 RMEKQQALEESKSDIGWGSQIRSYVLDDSR-IKDLRTGVETSNTTAVLNGDLDKFIEASL 300 >gi|225572941|ref|ZP_03781696.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM 10507] gi|225039699|gb|EEG49945.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM 10507] Length = 348 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 164/334 (49%), Positives = 232/334 (69%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N +R+ L + E P W + E++ M+E +++ + + + ++ ++ D L+E+ Sbjct: 3 NKEKRIEELEREMEAPDFWDDAEESQKKMKELKYMKDDLQTYENLRTQMEDMETLIEMGY 62 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE+D ++ E + L + + + ++LLSGE DSNDA + +HAGAGGTES DWA+ML Sbjct: 63 EENDPDLIPEIQEMLDEFQKSFDDIRVKTLLSGEYDSNDAIVTLHAGAGGTESCDWASML 122 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMYTRWA+K+ F E L+ DG+EAGIKS T ++G NAYG+LK E+GVHRLVRISP++ Sbjct: 123 YRMYTRWADKKGFSLEVLDYLDGDEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFN 182 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + +R TSF S V P +++ +++EI + D R+DTYR+SGAGGQH+N T SA+RITH+PT Sbjct: 183 AAGKRQTSFVSCDVMPDIEEDVDVEIRDDDIRVDTYRSSGAGGQHINKTSSAIRITHLPT 242 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ ERSQH NK +A ML+AKLY L+ Q+ EE + TEIGWG QIRSYV+ Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQENEEKLSGIRGEVTEIGWGNQIRSYVM 302 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QPY MVKD RT+ E + V+DG++D F+ A L Sbjct: 303 QPYTMVKDHRTSEETGNVDSVMDGNIDLFINAYL 336 >gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] Length = 348 Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 169/334 (50%), Positives = 229/334 (68%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q+L L+ P W + +A+ + ER +L + + + I++++ +EL E Sbjct: 8 QKLKELDEIMSSPDFWNDQKKAQKISAERTYLSDKLEKLNNIEEKINYLEEYIELLELEP 67 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D Q+ + ++ ++ + + ESLLSGE DS +A + V AG+GG E+ DWA MLLRM Sbjct: 68 DEEAKQDLENEIKNLETLINKFEVESLLSGEYDSKNAIVSVQAGSGGVEACDWAEMLLRM 127 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAEK + E ++ + AGIKSAT ++KGP AYG+L+GEQGVHRLVRISP+DSN Sbjct: 128 YLRWAEKNGYNVEIVDYQPDDVAGIKSATFIVKGPYAYGYLQGEQGVHRLVRISPFDSNK 187 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+++ V P + + I++EI+E D RIDT+RASGAGGQHVN TDSAVRITHIPTG+V Sbjct: 188 RRHTSFAAVSVIPEIGEEIKVEINEDDLRIDTFRASGAGGQHVNKTDSAVRITHIPTGIV 247 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V CQ ERSQ +N+A+A ML+AKLY+LE++K++E E K EI WG QIRSYV PY Sbjct: 248 VSCQSERSQIQNRAKAMQMLKAKLYQLEIEKQKEKRKELEGEKKEISWGSQIRSYVFHPY 307 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QMVKDLRT E + V+DG++D FM+ L K Sbjct: 308 QMVKDLRTGYETGNIQAVMDGEIDSFMETYLKYK 341 >gi|238796545|ref|ZP_04640052.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969] gi|238719523|gb|EEQ11332.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969] Length = 303 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 167/300 (55%), Positives = 215/300 (71%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 ++ ++ I ++ + D LLELA+E DD E L + ++ +F + SGE Sbjct: 1 MEEIVTTIDQLDQGMEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGE 60 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ Sbjct: 61 YDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIK 120 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID Sbjct: 121 IIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRID 180 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK Sbjct: 181 VYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQK 240 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 KNADKQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 299 >gi|317179435|dbj|BAJ57223.1| peptide chain release factor 2 [Helicobacter pylori F30] Length = 363 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESAELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|189425791|ref|YP_001952968.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ] gi|189422050|gb|ACD96448.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ] Length = 372 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 169/346 (48%), Positives = 235/346 (67%), Gaps = 1/346 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +++ L D D+ + L L+ + P W + ++ ++++R ++ + + Sbjct: 12 LTSRISSLRRSLDLDSKREELQELDARIAAPGFWDDPSGSQDILKKRTVIEKLLQSWDSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D +++EL E D L E +R+K VE +F+ +LSG D N ++ V+ Sbjct: 72 NRQADDVRVMIELGEESSDEDTLTEVHQMNERLKSGVEEAEFQRMLSGTHDRNGCFVSVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWANMLLRM R+ EK+ +K + DGEEAG+KSAT + G AYG LK Sbjct: 132 SGAGGTESQDWANMLLRMLLRYCEKKGWKAVITDYQDGEEAGLKSATFSVSGEFAYGHLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVR+SP+DSN+RRHTSF+S++V+P +++ I+I I++SD R+DTYR+SG+GGQ Sbjct: 192 AEAGVHRLVRLSPFDSNNRRHTSFASVFVFPEIEEEDIDIRIADSDLRVDTYRSSGSGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PT +VV CQ ERSQ N+A A +LRAKLYE E+++R A+ Sbjct: 252 HVNTTDSAVRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEMEERNAKASEIAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG LDDF+ Sbjct: 312 EKREIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDSVLDGALDDFV 357 >gi|46908681|ref|YP_015070.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b str. F2365] gi|67461157|sp|Q71WR9|RF2_LISMF RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|46881953|gb|AAT05247.1| peptide chain release factor 2, programmed frameshift [Listeria monocytogenes serotype 4b str. F2365] Length = 366 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 174/350 (49%), Positives = 229/350 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K ++Q+ G D D+ R++ L + DP+ W + A+ ++ E Sbjct: 12 KTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHA 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ I LEL EE D + +E +++ + + + +LS D N+A LE+ Sbjct: 72 LEEEQESMEISLELLKEEADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E Sbjct: 252 HINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY MVKD RTN E + V+DGDLD+F+ A L Sbjct: 312 EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYL 361 >gi|325266606|ref|ZP_08133283.1| peptide chain release factor RF2 [Kingella denitrificans ATCC 33394] gi|324982049|gb|EGC17684.1| peptide chain release factor RF2 [Kingella denitrificans ATCC 33394] Length = 367 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 164/338 (48%), Positives = 237/338 (70%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ +RL + +EDP LW + A+ + +ER+ L+ + ++ I++ + DN L+ Sbjct: 27 MDYQGKKERLEEVVGLSEDPELWNDPKRAQDIGKERKLLEGIVLTLENIENGIADNRELI 86 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++ +EE+D ++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 87 DMVVEENDEDGFAAIVADVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 146 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY R+AE++ FK E +E DGE AGI +AT+ ++G AYG L+ E GVHRLVR Sbjct: 147 AGMLLRMYLRYAERKGFKVEVVEQDDGEIAGINNATIRLEGEYAYGLLRTETGVHRLVRY 206 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DTYRASGAGGQH+N TDSAVR+T Sbjct: 207 SPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTYRASGAGGQHINKTDSAVRMT 266 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VVQ Q RSQH+N+ MLRAKL+ELE++KR E E K+++GWG QIR Sbjct: 267 HIPTGIVVQSQNSRSQHENRRVCEEMLRAKLFELEMRKRNEEKQALEEGKSDVGWGSQIR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRT E + VLDGDLD F++A+L Sbjct: 327 SYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363 >gi|163748442|ref|ZP_02155696.1| peptide chain release factor 2 [Shewanella benthica KT99] gi|161332020|gb|EDQ02697.1| peptide chain release factor 2 [Shewanella benthica KT99] Length = 352 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 167/343 (48%), Positives = 231/343 (67%), Gaps = 1/343 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG+FD+D +RL ++ + E +W + A+ L +ER L+ + I ++ L D Sbjct: 7 AFGGIFDYDAKKERLEEVSRELESSDIWNDPDNAQALGKERAALELIVKTIDDMDTGLED 66 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L+ELA+EE D + S L + + +F + SG D ++YL++ +G+GGT Sbjct: 67 VEGLVELAIEEADEETFNDASAELDGLDKRLADLEFRRMFSGPHDIANSYLDIQSGSGGT 126 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWANM+LRMY RW + FK E +E+ G+ AGIK AT+ G A+G L+ E GVH Sbjct: 127 EAQDWANMVLRMYLRWGDAHDFKPELIEVTAGDVAGIKGATIKFTGEYAFGSLRTETGVH 186 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS+ +RHTSF S++VYP +DD+IEI+I+ SD RIDTYRASGAGGQH+N T+S Sbjct: 187 RLVRKSPFDSSGKRHTSFCSVFVYPEIDDTIEIDINPSDLRIDTYRASGAGGQHINKTES 246 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E E +K++IGW Sbjct: 247 AIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNEEKQAAEDAKSDIGW 306 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 307 GSQIRSYVLDDAR-IKDLRTGVESRNTQSVLDGGLDMFIEASL 348 >gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118] gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius UCC118] gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 355 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 166/343 (48%), Positives = 231/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD D ++++ + +P W + +A+ ++ E L E+ + + D Sbjct: 3 LGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDL 62 Query: 70 LILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LEL E DD + + +N Q + ++ Q LLS + D N+A LE+H GAGGT Sbjct: 63 GVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGT 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDW +MLLRMYTRWA + FK E ++ G++AGIKS TL+I+G NAYG+L+ E+GVH Sbjct: 123 ESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS RRHTSF+S+ V P +DDS+E+E+ D +++ +RASGAGGQH+N T S Sbjct: 183 RLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+ HIPTG+VV Q +RSQ +N+A A NMLRAKLY+LE++++E+ + + +IGW Sbjct: 243 AVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGW 302 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L Sbjct: 303 GSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYL 345 >gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius CECT 5713] Length = 355 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 166/343 (48%), Positives = 231/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD D ++++ + +P W + +A+ ++ E L E+ + + D Sbjct: 3 LGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDL 62 Query: 70 LILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LEL E DD + + +N Q + ++ Q LLS + D N+A LE+H GAGGT Sbjct: 63 EVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGT 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDW +MLLRMYTRWA + FK E ++ G++AGIKS TL+I+G NAYG+L+ E+GVH Sbjct: 123 ESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS RRHTSF+S+ V P +DDS+E+E+ D +++ +RASGAGGQH+N T S Sbjct: 183 RLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+ HIPTG+VV Q +RSQ +N+A A NMLRAKLY+LE++++E+ + + +IGW Sbjct: 243 AVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGW 302 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L Sbjct: 303 GSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYL 345 >gi|193078655|gb|ABO13705.2| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978] Length = 305 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 160/287 (55%), Positives = 211/287 (73%), Gaps = 1/287 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 YELE+QKR E A E SK++IGWG QIRSYVL + +KDLRT +E Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVE 286 >gi|121996859|ref|YP_001001646.1| peptide chain release factor 2 [Halorhodospira halophila SL1] gi|121588264|gb|ABM60844.1| bacterial peptide chain release factor 2 (bRF-2) [Halorhodospira halophila SL1] Length = 291 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 159/281 (56%), Positives = 213/281 (75%), Gaps = 2/281 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +A EE D L+ ++QR+ +VE +F + SGE D+++A+L++ AG+GGTE+Q Sbjct: 8 MVAMAREEGDAETLEAVQADIQRVAGQVETLEFRRMFSGEMDTSNAFLDIQAGSGGTEAQ 67 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RWAE R F+TE +E+ G+EAG+KSAT+ + G A+GWL+ E GVHRLV Sbjct: 68 DWAEMLLRMYLRWAEARGFETEVIEVTAGQEAGVKSATIKVSGEYAFGWLRTETGVHRLV 127 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R SP+DS RRHTSFSS++V P +D ++++IEI SD R+D +RASGAGGQHVNTT+SAV Sbjct: 128 RKSPFDSGGRRHTSFSSVFVSPEIDEENVDIEIDPSDLRVDVFRASGAGGQHVNTTESAV 187 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQ Q +RSQHKN+A A + LRAKLYELE+Q+R A E +K++IGWG Sbjct: 188 RITHEPTGIVVQSQNDRSQHKNRATAMSQLRAKLYELEMQRRRAEAEAQEDTKSDIGWGN 247 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 248 QIRSYVLDQSR-IKDLRTGVEIGNTQAVLDGHLDPFIQASL 287 >gi|313884513|ref|ZP_07818274.1| peptide chain release factor 2 [Eremococcus coleocola ACS-139-V-Col8] gi|312620297|gb|EFR31725.1| peptide chain release factor 2 [Eremococcus coleocola ACS-139-V-Col8] Length = 341 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 173/320 (54%), Positives = 222/320 (69%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ ++ + + I+++ ++ D + LEL E D +L E D + Sbjct: 15 PDFWDDNDKAQKVISQLNEAKASYQTIQDLVSQVDDLGMALELYEESQDLDMLSEAEDIM 74 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + + LLSG DS +A LE+H GAGGTESQDW +MLLRMY RWA+K+ F+ Sbjct: 75 TVTSKALNNYELQLLLSGPHDSANAILEIHPGAGGTESQDWGSMLLRMYQRWADKQGFQV 134 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DSN+RRHTSF+SI V Sbjct: 135 EVLDYQAGDEAGIKSVTLEIKGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFASIEVT 194 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DDSIEIEI+ D R+DTYRASGAGGQH+N T SAVRITHIPTG+V Q Q +RSQ +N Sbjct: 195 PEMDDSIEIEINPDDIRVDTYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQRSQFQN 254 Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 + QA ML+AKLY+ E ++R +E+A I + + EIGWG QIRSYV PY MVKD RT E Sbjct: 255 RDQAMAMLKAKLYQREEEERAKEMAAI-KGQQLEIGWGSQIRSYVFHPYSMVKDHRTGYE 313 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD FM A L Sbjct: 314 VGNSQAVIDGDLDGFMDAYL 333 >gi|258512512|ref|YP_003185946.1| hypothetical protein Aaci_2552 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479238|gb|ACV59557.1| conserved hypothetical protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 383 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 171/351 (48%), Positives = 237/351 (67%), Gaps = 3/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ +L G D R++ L P W + A+ ++ E + + + ++ + Sbjct: 15 MATRLADFGRSLDVAGKEHRIATLEALMAAPDFWDDPDRAQKIIAEMNGVKSVVDTMRRL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D + L+LA EEDD + E + +++K E++ + + +LSGE D N+A LE+H Sbjct: 75 ESLLQDAEVALQLAQEEDDHDLFAEANRLAEQLKSEMDEFELQLMLSGEYDKNNAILELH 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRWAE +K E L+ GEEAGIKS TLL+KG NAYG+LK Sbjct: 135 PGAGGTESQDWASMLLRMYTRWAEDHGYKVEVLDYLPGEEAGIKSVTLLVKGHNAYGYLK 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHRLVRISP+D++ RRHTSF+S+ V P + +D IEI + RIDTYR++GAGGQ Sbjct: 195 AEKGVHRLVRISPFDASGRRHTSFASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGE 300 HVNTTDSAVRITHIPTG+VV CQ ERSQ +N+A+A +L+++L ++RE E+A + Sbjct: 255 HVNTTDSAVRITHIPTGIVVTCQSERSQIQNRARAMEILKSRLAAKRREEREQELAQL-R 313 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EI WG QIRSYV PY +VKD RTN E ++ V+DG++D F+ A L Sbjct: 314 GEQKEIAWGSQIRSYVFHPYSLVKDHRTNYETSNTQAVMDGEIDPFIHAYL 364 >gi|307720247|ref|YP_003891387.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas autotrophica DSM 16294] gi|306978340|gb|ADN08375.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas autotrophica DSM 16294] Length = 365 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 174/346 (50%), Positives = 236/346 (68%), Gaps = 2/346 (0%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 ++ + G+ + RL + D W N A + +E+ L + ++ Sbjct: 16 KMKNITGVVEPKKIQTRLQEIQELENDQDFWNNADYAAKIQKEKTQLQRKLDKYNTAKNA 75 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D L ++A EEDD L+ ++ ++ ++ + E LLSGE D+N+A L +H GA Sbjct: 76 VEDAKELYDMAKEEDDSESLEALYEDAPNLEKQIRDMEIEVLLSGETDANNAILSIHPGA 135 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTESQDWA MLLRMY RWAE+R FK E L+ G+EAGIK ++LIKG NAYG+LK E Sbjct: 136 GGTESQDWAEMLLRMYKRWAERRGFKVEVLDYQAGDEAGIKDVSVLIKGENAYGYLKVEN 195 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+I I + D RIDTYR+SGAGGQHVN Sbjct: 196 GIHRLVRISPFDSNAKRHTSFASVMVSPEIDDDIDITIEDKDIRIDTYRSSGAGGQHVNK 255 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SA+R+THI TGVVVQCQ +RSQHKNKA A ML+++LYELEL+ E+ A +K+E Sbjct: 256 TESAIRLTHIETGVVVQCQNDRSQHKNKATAMKMLKSRLYELELE--EQKAKEAGIAKSE 313 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IGWG QIRSYV+QPYQ VKD R+N ++ S +LDGD+D+ ++ L Sbjct: 314 IGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDNMIEGVL 359 >gi|316940875|gb|ADU74909.1| Peptide chain release factor 2 [Clostridium thermocellum DSM 1313] Length = 375 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 168/351 (47%), Positives = 237/351 (67%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + L+ +G D + ++ L K +P W + ++ ++++ + L + + ++ Sbjct: 14 FKQNLDEMGKSLDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D + L EL +EE D S++ E + + K E E + E+LL+G+ D N+A L +H Sbjct: 74 VSQWEDLITLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW ML RMYTRWAEK+ F + L+ DGEEAGIKS T + G NAYG+LK Sbjct: 134 AGAGGTEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D++ RRHTSF+S+ V P ++D IE+ I+ D RIDTYR+SGAGGQH Sbjct: 194 SEKGVHRLVRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGES 301 +N T+SAVRITHIPTG+VV CQ ERSQ +NK A ML+AKL EL E + +E+I ++ + Sbjct: 254 INKTESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDL-KG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + EI WG QIRSYV PY +VKD RTN E+ + V+DG+LD F+ + L+ Sbjct: 313 IQLEIAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 363 >gi|290511305|ref|ZP_06550674.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55] gi|289776298|gb|EFD84297.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55] Length = 299 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 166/280 (59%), Positives = 206/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E +D E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 17 LLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 76 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLV Sbjct: 77 DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLV 136 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 137 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 196 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 197 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 256 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 257 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 295 >gi|317179974|dbj|BAJ57760.1| peptide chain release factor 2 [Helicobacter pylori F32] Length = 381 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 49 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 108 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 109 DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 165 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 166 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 225 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 226 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 285 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 286 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 343 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 344 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380 >gi|261837620|gb|ACX97386.1| peptide chain release factor RF-2 [Helicobacter pylori 51] Length = 363 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|315586172|gb|ADU40553.1| peptide chain release factor RF2 [Helicobacter pylori 35A] Length = 385 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 53 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESAELFELAQNDN 112 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 113 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 169 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 170 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 229 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 230 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 289 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 290 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 347 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 348 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384 >gi|332673011|gb|AEE69828.1| peptide chain release factor RF2 [Helicobacter pylori 83] Length = 385 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 53 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 112 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 113 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 169 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 170 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 229 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 230 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 289 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 290 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 347 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 348 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384 >gi|52425597|ref|YP_088734.1| peptide chain release factor 2 [Mannheimia succiniciproducens MBEL55E] gi|52307649|gb|AAU38149.1| PrfB protein [Mannheimia succiniciproducens MBEL55E] Length = 325 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 171/321 (53%), Positives = 230/321 (71%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P +W +A+ L +ER L+ ++ IK++ L D LLELA+E +D E Sbjct: 2 EQPDVWNEPEKAQALGKERSALETVVNTIKKLDQGLEDVDGLLELAVEGEDEETFNEAVT 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L ++ ++ +F + SGE D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + F Sbjct: 62 ELDELEQQLAKLEFRRMFSGEHDACDCYIDLQAGSGGTEAQDWTEMLLRMYLRWAESKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 KTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ + Sbjct: 122 KTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 +YP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQH Sbjct: 182 IYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIVVQCQNDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNK Q L+AKLYE+ELQK+ E SK++IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDGDLD F++A+L Sbjct: 301 ENRNTQAVLDGDLDRFIEASL 321 >gi|295707157|ref|YP_003600232.1| peptide chain release factor 2 [Bacillus megaterium DSM 319] gi|294804816|gb|ADF41882.1| peptide chain release factor 2 [Bacillus megaterium DSM 319] Length = 326 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 172/321 (53%), Positives = 221/321 (68%), Gaps = 2/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSD 90 DP+ W + A+ ++ E L +A++ + D +NL + EL EE D + +E Sbjct: 3 DPNFWNDQQAAQTVINEANGLKDAVNQFNHL-DETYENLQVSYELVKEEYDEDLAEELVS 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ F Sbjct: 62 ELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 122 KVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P +D I I+I D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 182 IMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQI 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ QA ML++KLY+LE++K++E + +IGWG QIRSYV PY +VKD RTN Sbjct: 242 KNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTNT 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DGDLD F+ A L Sbjct: 302 EVGNTQSVMDGDLDPFIDAYL 322 >gi|261839033|gb|ACX98798.1| peptide chain release factor 2 [Helicobacter pylori 52] Length = 363 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESAELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPILEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|227891182|ref|ZP_04008987.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC 11741] gi|227867056|gb|EEJ74477.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC 11741] Length = 355 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 166/343 (48%), Positives = 231/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD D ++++ + +P W + +A+ ++ E L E+ + + D Sbjct: 3 LGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDL 62 Query: 70 LILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LEL E DD + + +N Q + ++ Q LLS + D N+A LE+H GAGGT Sbjct: 63 GVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGT 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDW +MLLRMYTRWA + FK E ++ G++AGIKS TL+I+G NAYG+L+ E+GVH Sbjct: 123 ESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS RRHTSF+S+ V P +DDS+E+E+ D +++ +RASGAGGQH+N T S Sbjct: 183 RLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+ HIPTG+VV Q +RSQ +N+A A NMLRAKLY+LE++++E+ + + +IGW Sbjct: 243 AVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEVEEKEKQRAAIQGEQLDIGW 302 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L Sbjct: 303 GSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYL 345 >gi|294501808|ref|YP_003565508.1| peptide chain release factor 2 [Bacillus megaterium QM B1551] gi|294351745|gb|ADE72074.1| peptide chain release factor 2 [Bacillus megaterium QM B1551] Length = 326 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 172/321 (53%), Positives = 221/321 (68%), Gaps = 2/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSD 90 DP+ W + A+ ++ E L +A++ + D +NL + EL EE D + +E Sbjct: 3 DPNFWNDQQAAQTVINEANGLKDAVNQFNHL-DETYENLQVSYELVKEEYDEDLAEELVS 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ F Sbjct: 62 ELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 122 KVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P +D I I+I D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 182 IMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQI 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ QA ML++KLY+LE++K++E + +IGWG QIRSYV PY +VKD RTN Sbjct: 242 KNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTNT 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DGDLD F+ A L Sbjct: 302 EVGNTQSVMDGDLDPFIDAYL 322 >gi|67461211|sp|Q8Y4D8|RF2_LISMO RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 366 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 174/350 (49%), Positives = 228/350 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K ++Q+ G D D+ R++ L + DP+ W + A+ ++ E Sbjct: 12 KTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHA 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ I LEL EE D + +E +++ + + + +LS D N+A LE+ Sbjct: 72 LEEEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E Sbjct: 252 HINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L Sbjct: 312 EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYL 361 >gi|15644800|ref|NP_206970.1| peptide chain release factor 2 [Helicobacter pylori 26695] gi|2500142|sp|P55999|RF2_HELPY RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|2313254|gb|AAD07236.1| peptide chain release factor RF-2 (prfB) [Helicobacter pylori 26695] Length = 363 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 177/337 (52%), Positives = 240/337 (71%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L +++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESVELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPILENSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YR+SGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRSSGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|73666975|ref|YP_302991.1| peptide chain release factor 2 [Ehrlichia canis str. Jake] gi|72394116|gb|AAZ68393.1| bacterial peptide chain release factor 2 (bRF-2) [Ehrlichia canis str. Jake] Length = 335 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 165/330 (50%), Positives = 227/330 (68%), Gaps = 2/330 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 LN + LW + A+ ++ ER + I+ E+++ LL++ + D +L Sbjct: 5 LNVQCSSTSLWTDNALAQNILSERARVSKIITSFTELEEEFNYYTELLDVVKNDTD-ELL 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + L ++K ++ K+ E L S EAD ND ++E+ +GAGGTES DW+ MLLRMY RWA Sbjct: 64 NDIEIGLTKLKERIQKKEVECLFSNEADQNDCFIEIQSGAGGTESNDWSCMLLRMYVRWA 123 Query: 146 E-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 E F TE + DGEE GIKSAT+ + G NAYGW K E G+HRLVRISP++SN++RHT Sbjct: 124 EIYHNFTTEIVYKLDGEEVGIKSATIKVTGDNAYGWSKTESGIHRLVRISPFNSNAKRHT 183 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 +FSSI V P+ D++I IE + D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VVQCQ Sbjct: 184 TFSSILVSPITDENINIETLDKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQ 243 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 RSQH+N A+A N+L+++LY+L+LQ++E+ + + IGWG QIRSY++ PYQMVK Sbjct: 244 NNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRSYIMHPYQMVK 303 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 D+RT E + + VLDG+LD F+ + L K Sbjct: 304 DVRTGHEIGNVNSVLDGNLDPFIISALTAK 333 >gi|312109506|ref|YP_003987822.1| peptide chain release factor 2 [Geobacillus sp. Y4.1MC1] gi|311214607|gb|ADP73211.1| Peptide chain release factor 2 [Geobacillus sp. Y4.1MC1] Length = 367 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 182/354 (51%), Positives = 242/354 (68%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L + G D + R+ L + +P W + A+ ++ E L + + + Sbjct: 13 KMAKRLAEIRGSLDLEAKQARIRELEEQMAEPDFWDDQKAAQTVINEANALKDLVGEFQS 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++R + + EL EE D + QE +R+ + + + LL+ D N+A LE+ Sbjct: 73 LEERFENLEVTYELIKEEPDEDLQQELVTEAKRLTKDFSEFELQLLLNEPYDKNNAILEL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+ GEEAGIKS TLLIKG NAYG+L Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D++ RRHTSF S V P +DD IEIEI + RIDTYR+SGAGGQ Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGE 300 HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ E+A I Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKALNMLKAKLYQKKLEEQQAELAEI-R 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L K Sbjct: 312 GEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365 >gi|296104552|ref|YP_003614698.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059011|gb|ADF63749.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 293 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 166/280 (59%), Positives = 206/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VD+ I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDEDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|312621634|ref|YP_004023247.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor kronotskyensis 2002] gi|312202101|gb|ADQ45428.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor kronotskyensis 2002] Length = 372 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 169/339 (49%), Positives = 233/339 (68%), Gaps = 2/339 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D L L +T P WQ++ ++ ++++ + + + I +++ + D +L Sbjct: 25 LDIDGLESELKSLENETSKPEFWQDIENSQKVLQKIKRIKDKIERFQKLYSQWEDLKVLT 84 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL++EE + + +E L ++ +++ + E LL+G D N+A L +HAGAGGTE+QDW Sbjct: 85 ELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHAGAGGTEAQDW 144 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRI Sbjct: 145 AEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKAEKGVHRLVRI 204 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RRHTSF+++ V P V+D +IEI E D IDTYR+SGAGGQHVN T+SAVRI Sbjct: 205 SPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHVNKTESAVRIK 264 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+VV CQ ERSQHKN+ A +L+AKL EL E ++RE+I + + +TEIGWG QI Sbjct: 265 HIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKL-KGEQTEIGWGNQI 323 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 324 RSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 362 >gi|42522998|ref|NP_968378.1| hypothetical protein Bd1489 [Bdellovibrio bacteriovorus HD100] gi|39575203|emb|CAE79371.1| prfB [Bdellovibrio bacteriovorus HD100] Length = 321 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 164/307 (53%), Positives = 218/307 (71%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L +E+ L+ A+ RL D+ +LLE+A E D E + ++ E + Sbjct: 4 LNKEKALLEKAVGEFDAFASRLSDSKVLLEMAEEAQDEGSFSEAKAEVVALEKLGEELEL 63 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + +L+GE DSN +YL +++GAGGTES DWA+MLLRMYTR+A+K FK + +E+ +GE AG Sbjct: 64 KRVLNGELDSNSSYLSINSGAGGTESCDWASMLLRMYTRYADKHGFKVQIIEMTEGEGAG 123 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKS TLLI+GP AYG+LK E GVHRLVRISP+DSN+RRHTSF+S++ + VDD I IE+ Sbjct: 124 IKSCTLLIEGPYAYGYLKAESGVHRLVRISPFDSNARRHTSFASVFAWAEVDDDINIEVR 183 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D ++DT+RASGAGGQHVN TDSAVR+THIP+GV+V CQ ERSQ +N+ +A ML+A+L Sbjct: 184 PDDLKVDTFRASGAGGQHVNRTDSAVRMTHIPSGVIVTCQVERSQIQNREKALKMLKARL 243 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE+E++KR + S K WG QIRSYV+ PYQMVKD RT+ E DV+DGDLD Sbjct: 244 YEMEIEKRNAEKDAMNSQKKANEWGSQIRSYVMHPYQMVKDHRTDFETNQVDDVMDGDLD 303 Query: 345 DFMKATL 351 F+ + L Sbjct: 304 GFIMSYL 310 >gi|152991913|ref|YP_001357634.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1] gi|166225117|sp|A6Q718|RF2_SULNB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151423774|dbj|BAF71277.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1] Length = 364 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 169/349 (48%), Positives = 233/349 (66%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS+++ + + D +RL + +DP+ W + A + +E+ + + Sbjct: 13 LSKKMENISNIVKPDELKKRLDEIEEMQQDPNFWNDTANAGKISQEKTRTERILETYHNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D + D + E+A E D L+ ++ + +K + + +LSGE DSN+A + +H Sbjct: 73 NDAVYDAIEYFEMAKAEKDEETLEMLYEDAETLKERTNALEVQMMLSGEHDSNNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RWAE+ FK E L+ GEEAGIK + +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+IEI + D RIDTYRASGAGGQH Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFTSVMVSPEIDDDIDIEIEDKDLRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH PTG+VVQCQ +RSQHKNK+ A ML+++LYE E+ K++ A I Sbjct: 253 VNKTESAIRITHEPTGIVVQCQNDRSQHKNKSAAMKMLKSRLYEYEMAKKQ--AEIDGVE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYV+QPYQ VKD R+ T+ +LDGD+D ++ L Sbjct: 311 KSDIGWGHQIRSYVMQPYQQVKDTRSGQAFTNVDAILDGDIDKLLEGVL 359 >gi|297172547|gb|ADI23517.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF0770_41L09] Length = 331 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 161/261 (61%), Positives = 198/261 (75%) Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L ++ ++E + ++L GE D DA + +H GAGG ESQDWA ML+RMYTRW+E+R F Sbjct: 62 GLASVEKDLEVLEVRTMLQGEDDHRDAIVTIHPGAGGLESQDWAGMLMRMYTRWSERRGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L++ EE GIKSATL IKG AYG+LK E GVHRLVRISP+D SRRHTSF+S++ Sbjct: 122 GIEVLDLQLAEEGGIKSATLEIKGECAYGYLKAEGGVHRLVRISPFDQQSRRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 +YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TDSAVRITH PTG+V CQQERSQH Sbjct: 182 IYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPTGIVATCQQERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNK+ A MLRA LY+ LQ++E + E++KTEIG+G QIRSYV QPY MV D RT + Sbjct: 242 KNKSTAMKMLRAALYQHALQEQERERAVLEATKTEIGFGNQIRSYVFQPYTMVNDHRTEL 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 + T V+DGDLD F++A L Sbjct: 302 KITDVQGVMDGDLDPFIEAYL 322 >gi|317012016|gb|ADU82624.1| peptide chain release factor 2 [Helicobacter pylori Lithuania75] Length = 363 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 176/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 31 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 90 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE E +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 91 DEVTLSLLYEEAPVLEHSVQKVE---IEIMLSGENDASNAIITIQPGAGGTESQDWASIL 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 148 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 208 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ ++ K+EIGWG QIRSYVL Sbjct: 268 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQ--SSTKNEEKSEIGWGHQIRSYVL 325 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 326 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|120597725|ref|YP_962299.1| peptide chain release factor 2 [Shewanella sp. W3-18-1] gi|146294138|ref|YP_001184562.1| peptide chain release factor 2 [Shewanella putrefaciens CN-32] gi|120557818|gb|ABM23745.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. W3-18-1] gi|145565828|gb|ABP76763.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella putrefaciens CN-32] Length = 352 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 172/342 (50%), Positives = 233/342 (68%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ET+ L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDKFIEASL 348 >gi|117617639|ref|YP_857857.1| peptide chain release factor 2 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166223621|sp|A0KNK6|RF2_AERHH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|117559046|gb|ABK35994.1| peptide chain release factor 2 (programmed frameshift) [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 365 Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 175/350 (50%), Positives = 236/350 (67%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G D+D +RL +N + E P +W A+ L +ER L+N + I Sbjct: 13 ELSERTELLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVALENVVGTIDT 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D +L+ELA+E +D E ++ ++ +F + SG+ D +D Y+++ Sbjct: 73 LTQGADDVAMLVELAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDPSDCYIDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW + +K E +E +G+ AGIKSAT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q L+AKLYELE+QK+ E Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 TKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|54294665|ref|YP_127080.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens] gi|53754497|emb|CAH15981.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens] Length = 335 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 175/321 (54%), Positives = 229/321 (71%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E ++W N +A+ L RER L+ + + ++ + D L ELA EEDD + + + Sbjct: 9 ESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQSELFELAREEDDEQTINDIGE 68 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L+ I+ +V +F + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY RW E F Sbjct: 69 ELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLRWGEHHGF 128 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 TE +E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRHTSF++++ Sbjct: 129 TTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 188 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQCQ +RSQH Sbjct: 189 VSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQCQNDRSQH 248 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + +KDLRT + Sbjct: 249 KNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLDQSR-IKDLRTGV 307 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E ++ VLDG LD F++A+L Sbjct: 308 ETSNTQAVLDGSLDQFIEASL 328 >gi|326316598|ref|YP_004234270.1| peptide chain release factor 2 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373434|gb|ADX45703.1| Peptide chain release factor 2 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 367 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 168/349 (48%), Positives = 237/349 (67%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++ L D+D +RL +N EDP +W + +A+ L +E++ L + + ++ Sbjct: 16 LSQRTQELRRYLDFDAKFERLRTVNASLEDPSVWNDPKKAQELGKEQKSLSAVVVTLDKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN L E++ EE D + L +++ +E +F + S EAD + ++++ Sbjct: 76 TRELADNAELYEMSKEEGDEAGLLTIEAETAKLRPLIEELEFRRMFSNEADPLNCFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA MLLR Y ++AE++ FK + G+ AGIKSAT+ I+G AYG L+ Sbjct: 136 AGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP +DDSIEI I+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E E + Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDT 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363 >gi|217034219|ref|ZP_03439638.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10] gi|216943387|gb|EEC22846.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10] Length = 381 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 178/337 (52%), Positives = 239/337 (70%), Gaps = 8/337 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ ++ L ++ L ELA ++ Sbjct: 49 QELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKTKNSLDESTELFELAQNDN 108 Query: 81 D---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D S+L E + L+ +VE K +LSGE D+++A + + GAGGTESQDWA++L Sbjct: 109 DEVTLSLLYEEAPILEHSVQKVEIK---IMLSGENDASNAIITIQPGAGGTESQDWASIL 165 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVRISP+D Sbjct: 166 YRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFD 225 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN T+SAVRITH PT Sbjct: 226 ANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPT 285 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A E K+EIGWG QIRSYVL Sbjct: 286 GIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEE--KSEIGWGHQIRSYVL 343 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 344 APYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380 >gi|212640382|ref|YP_002316902.1| protein chain release factor B [Anoxybacillus flavithermus WK1] gi|212561862|gb|ACJ34917.1| Protein chain release factor B [Anoxybacillus flavithermus WK1] Length = 329 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 168/323 (52%), Positives = 226/323 (69%), Gaps = 2/323 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A+ ++ E L + + + +++R + + EL EE D + +E Sbjct: 4 PDFWDDQKAAQSVISEANALKDLVGEFRSLEERFENLEVTYELVKEEPDEELQKELVAEA 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +++ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ +K Sbjct: 64 KKLSKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGYKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S V Sbjct: 124 ETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVV 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P DD+IEI++ + ++DTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ KN Sbjct: 184 PEFDDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIKN 243 Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 + +A NML+AKLY+ +L++++ E+A I + EIGWG QIRSYV PY +VKD RTN E Sbjct: 244 REKAMNMLKAKLYQKKLEEQQAELAEI-RGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L K Sbjct: 303 VGNVQAVMDGEIDVFIDAYLRSK 325 >gi|238926688|ref|ZP_04658448.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531] gi|238885445|gb|EEQ49083.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531] Length = 368 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 173/334 (51%), Positives = 226/334 (67%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++++ L K +P W + A+ L +E L + K + + D L E+ +EE Sbjct: 30 EKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYKGLMAKYEDAETLYEMGIEEG 89 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+ + L I +E Q E LLSG+ D+N+A L +HAGAGGTE+QDW MLLRM Sbjct: 90 DASMEDDIRAELDLITEGLETLQLEVLLSGDYDANNAILTLHAGAGGTEAQDWTQMLLRM 149 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE+ F E ++ G+EAG+KSATL IKG NAYG+LK E+GVHRLVRISP+DS + Sbjct: 150 YGRWAERHGFAVETADLQPGDEAGVKSATLFIKGHNAYGFLKSEKGVHRLVRISPFDSQA 209 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSFS+ V P +DD++E+ I+ D R+D YRASGAGGQH+N T SAVR+TH PTG+V Sbjct: 210 RRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIV 269 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E + +I WG QIRSYV QPY Sbjct: 270 VQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPY 329 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 MVKD+RTN E + V+DG++D F++A L K Sbjct: 330 TMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363 >gi|149910167|ref|ZP_01898813.1| putative peptide chain release factor 2 [Moritella sp. PE36] gi|149806753|gb|EDM66717.1| putative peptide chain release factor 2 [Moritella sp. PE36] Length = 301 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 160/286 (55%), Positives = 213/286 (74%), Gaps = 2/286 (0%) Query: 67 CDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 CD++ L+ELA+E +D E + ++ ++ +F + SG+ D+ND YL++ +G+ Sbjct: 13 CDDVEGLVELAVEAEDEETFAEAQHEIIGLEAQLAKLEFRRMFSGKHDANDCYLDIQSGS 72 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWANMLLRM+ RW E KFK E +E+ G+ AGIK AT+ + G AYGWL+ E Sbjct: 73 GGTEAQDWANMLLRMFLRWGEAHKFKVELIEVSSGDVAGIKGATIRLGGEYAYGWLRTET 132 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS+ RRHTSF+SI+VYP +DDSIEI+++ SD RID YRASGAGGQHVNT Sbjct: 133 GVHRLVRKSPFDSSGRRHTSFASIFVYPEIDDSIEIDLNPSDLRIDVYRASGAGGQHVNT 192 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PT +VVQCQ +RSQHKNK A +RAKL++ E+QK+ I E +K++ Sbjct: 193 TESAVRITHLPTNLVVQCQNDRSQHKNKDAAMKQMRAKLFDHEMQKQNAEKQIAEDAKSD 252 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 253 IGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 297 >gi|52842005|ref|YP_095804.1| peptide chain release factor 2 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148359322|ref|YP_001250529.1| peptide chain release factor 2 [Legionella pneumophila str. Corby] gi|296107369|ref|YP_003619069.1| Protein chain release factor B [Legionella pneumophila 2300/99 Alcoy] gi|52629116|gb|AAU27857.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148281095|gb|ABQ55183.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila str. Corby] gi|295649270|gb|ADG25117.1| Protein chain release factor B [Legionella pneumophila 2300/99 Alcoy] gi|307610478|emb|CBX00050.1| hypothetical protein LPW_18051 [Legionella pneumophila 130b] Length = 335 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 175/321 (54%), Positives = 229/321 (71%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E ++W N +A+ L RER L+ + + ++ + D L ELA EEDD + + + Sbjct: 9 ESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQTINDIGE 68 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L+ I+ +V +F + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY RW E F Sbjct: 69 ELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLRWGEHHGF 128 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 TE +E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRHTSF++++ Sbjct: 129 TTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 188 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQCQ +RSQH Sbjct: 189 VSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQCQNDRSQH 248 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + +KDLRT + Sbjct: 249 KNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLDQSR-IKDLRTGV 307 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E ++ VLDG LD F++A+L Sbjct: 308 ETSNTQAVLDGSLDQFIEASL 328 >gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] Length = 367 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 170/352 (48%), Positives = 241/352 (68%), Gaps = 5/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + D D + L ++ W + +AK ++++R+ L+ ++ I+ Sbjct: 10 ELKERFEGIRKVLDIDRLKEELRKMDETMSAQGFWDDQEKAKKVIQKRKWLEETVNSIET 69 Query: 62 IQDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 ++ L D L + EED +IL+E ++L+ E+E K + LSGE DS +AYL Sbjct: 70 LEKSLRDVEELSQTTPEEDTDTWAILEEEMESLEDKLKELELKTY---LSGEMDSKNAYL 126 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + AGAGGTE+ DWA+ML RMY RWAE++ + E ++I + AGIKS TLL+KGP AYG Sbjct: 127 TIQAGAGGTEACDWADMLYRMYRRWAERKGYDVEVVDITPDDVAGIKSVTLLVKGPYAYG 186 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +L+GEQGVHRLVRISP+DSN+RRHTSF+++ V P +D+ I IE+ + D +I+T+RASGAG Sbjct: 187 YLRGEQGVHRLVRISPFDSNARRHTSFAAVSVMPQIDEDINIEVRDEDLKIETFRASGAG 246 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ+VN TD+AVR+THIPTG+VV CQQERSQ +N+ +A +L+AKLY+LE QK E Sbjct: 247 GQYVNKTDTAVRLTHIPTGIVVSCQQERSQFQNRRKALELLKAKLYQLEQQKLMEKRKQY 306 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E KT+IGWG QIRSYV PY++VKDLRT E + V+DGD+D F++ L Sbjct: 307 EGEKTDIGWGHQIRSYVFHPYRLVKDLRTGYETGNVDAVMDGDIDQFIEGFL 358 >gi|238783657|ref|ZP_04627677.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970] gi|238715370|gb|EEQ07362.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970] Length = 289 Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 206/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+GGTE+Q Sbjct: 7 LLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E GVHRLV Sbjct: 67 DWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWLRTETGVHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Q Sbjct: 187 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 247 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 285 >gi|313895325|ref|ZP_07828882.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str. F0430] gi|312976220|gb|EFR41678.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str. F0430] Length = 368 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 172/334 (51%), Positives = 228/334 (68%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++++ L K +P W + A+ + +E L + K + + D L E+ +EE+ Sbjct: 30 EKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKALAAKYEDAETLYEMGIEEN 89 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+ ++ L I +E Q E LLSGE D+N+A L +HAGAGGTE+QDW MLLRM Sbjct: 90 DPSMERDIRAELDLIAEGLETLQLEVLLSGEYDANNAILTLHAGAGGTEAQDWTQMLLRM 149 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE+ F E ++ G+EAG+KSA+L IKG NAYG+LK E+GVHRLVRISP+DS + Sbjct: 150 YGRWAERHGFTVETADLQPGDEAGVKSASLFIKGHNAYGFLKSEKGVHRLVRISPFDSQA 209 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSFS+ V P +DD++E++I D R+D YRASGAGGQH+N T SAVR+TH PTG+V Sbjct: 210 RRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIV 269 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E + +I WG QIRSYV QPY Sbjct: 270 VQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGVQQKIEWGSQIRSYVFQPY 329 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 MVKD+RTN E + V+DG++D F++A L K Sbjct: 330 TMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363 >gi|91226783|ref|ZP_01261436.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01] gi|269964522|ref|ZP_06178762.1| peptide chain release factor 2 [Vibrio alginolyticus 40B] gi|91188914|gb|EAS75198.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01] gi|269830759|gb|EEZ84978.1| peptide chain release factor 2 [Vibrio alginolyticus 40B] Length = 289 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 211/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+EE+D E L ++ ++E +F + SG+ DS+D Y+++ AG+GGTE+Q Sbjct: 7 LLELAVEEEDQETFDEIEPELAELEEKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW NMLLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G AYGWL+ E GVHRLV Sbjct: 67 DWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLKSATVRISGEYAYGWLRTETGVHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSF+S ++YP +D++I+I+I+ SD RID YRASGAGGQHVNTT+SAVR Sbjct: 127 RKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG Q Sbjct: 187 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 247 IRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 285 >gi|77457286|ref|YP_346791.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf0-1] gi|77381289|gb|ABA72802.1| putative Peptide chain release factor 2 (RF-2) protein [Pseudomonas fluorescens Pf0-1] Length = 280 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 160/277 (57%), Positives = 209/277 (75%), Gaps = 1/277 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A+EE+D + + + LQ ++ + +F + S E D N+AYL++ AG+GGTE+QDWA Sbjct: 1 MAVEENDEGAVNDVVEVLQGLEESLSKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 N+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ E GVHRLVR S Sbjct: 61 NILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 121 PFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PT VV CQ ERSQH NK A MLRAKLYE E+QKR + E +K++IGWG QIRS Sbjct: 181 VPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL + +KDLRTNIE++ VLDGD+D++++A+L Sbjct: 241 YVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLEASL 276 >gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5] gi|6225943|sp|O67695|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5] Length = 373 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 169/354 (47%), Positives = 250/354 (70%), Gaps = 5/354 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++L + + + L L+ K +P+ W++ +AK +++ R+ ++ ++ +K + Sbjct: 13 LRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEETLNKLKNL 72 Query: 63 QDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + + D L+E+ EED +++ E ++R E+E K + LSGE D+ +AYL Sbjct: 73 EKSVKDLEELVEITSEEDTETWAMMDEEIKEVERTLRELELKTY---LSGEMDAKNAYLT 129 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGTE+ DWA+ML RMY RWAEK+ ++ E ++I + AGIKS T+L+KGP AYG+ Sbjct: 130 IQAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVKGPYAYGY 189 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGEQGVHRLVRISP+D+N+RRHTSF+++ V P +D+ I+IEI D +I+T+RASGAGG Sbjct: 190 LKGEQGVHRLVRISPFDANARRHTSFAAVSVMPQIDEDIKIEIKPEDLKIETFRASGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN TD+AVRITHIPTG+ V CQQERSQ++NK +A +L+AKLY+LE++K EE E Sbjct: 250 QYVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKLEEKKKQYE 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYV PY+++KDLRT E + V+DG++D+F+++ L K Sbjct: 310 GEKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLKWK 363 >gi|237752014|ref|ZP_04582494.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC BAA-430] gi|229376581|gb|EEO26672.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC BAA-430] Length = 367 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 167/318 (52%), Positives = 221/318 (69%), Gaps = 6/318 (1%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQ 93 W++ +A L +E++ + + + L D + L EL+ ++ + +L S+ L+ Sbjct: 45 FWEDAKKAGELQKEKKRCERQLEKYNNAKSALDDAIELFELSSDDLESLEVLFAESEELE 104 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 I ++ + E +LS DSN+A + GAGGTESQDWA+ML RMY RWAE++ FK E Sbjct: 105 SI---IKNAEIEVMLSDPLDSNNAIFTITPGAGGTESQDWASMLYRMYLRWAERKDFKVE 161 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 L+ +G+EAGIK A+ +IKG NAYG+ K E GVHRLVRISP+D+N++RHTSFSS+ V P Sbjct: 162 LLDYQEGDEAGIKDASFIIKGENAYGYAKAENGVHRLVRISPFDANAKRHTSFSSVQVSP 221 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +DD I IEI E D IDTYRASGAGGQHVN T+SAVRITH P+G+VVQCQ +RSQHKNK Sbjct: 222 EIDDEINIEIDEKDLEIDTYRASGAGGQHVNKTESAVRITHKPSGIVVQCQNDRSQHKNK 281 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A A ML++KLYELE KRE +N + K + GWG QIRSYVL PYQ VKDLR+N+ T Sbjct: 282 ASALKMLKSKLYELERLKREAESN--HTDKGDNGWGHQIRSYVLTPYQQVKDLRSNLAYT 339 Query: 334 SPSDVLDGDLDDFMKATL 351 + +LDGD+D ++ L Sbjct: 340 NVDAILDGDIDTILEGVL 357 >gi|78356848|ref|YP_388297.1| peptide chain release factor 2 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219253|gb|ABB38602.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 358 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 170/351 (48%), Positives = 227/351 (64%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M S L GG FD + RL + + P W + ++RE+ L+N+++ + Sbjct: 1 MPFSSSLKRSGGAFDHAQSKYRLEEIEKQLSSPDAWNAPEKLTPVLREKSQLENSVARLD 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ D LELA EE+ +L++ + ++ +E + LLS E D + A LE Sbjct: 61 ALRQAKDDMQGWLELAEEENTQEVLEQLEEQAGILEALLEETEVGLLLSAEEDKHAAILE 120 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTE+QDWA MLLRMY RWAE +FK E L+ DG+EAGIKS TL I G NAYG Sbjct: 121 IHPGAGGTEAQDWAEMLLRMYVRWAESHEFKAEYLDYLDGDEAGIKSVTLKIDGTNAYGL 180 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE+G+HRL+RISPYD++ RRHTSF+S+ V P + I I+I +SD RID +R+SG GG Sbjct: 181 LKGEKGIHRLIRISPYDASGRRHTSFASVDVIPDAGEEITIDIKDSDLRIDIFRSSGPGG 240 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTT SAVR+THIPTG+ QCQ E+SQH NK A +LRA+LYE E+++R+ Sbjct: 241 QSVNTTSSAVRVTHIPTGITAQCQNEKSQHHNKETAMQILRARLYEAEIRRRDAEKQADY 300 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +SK IGWG QIR+Y LQPY++VKD R+N E VLDG+LD M+ L Sbjct: 301 ASKEAIGWGSQIRTYTLQPYRLVKDHRSNFEVGDVEAVLDGELDALMRNHL 351 >gi|315638344|ref|ZP_07893523.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21] gi|315481555|gb|EFU72180.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21] Length = 370 Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 174/353 (49%), Positives = 234/353 (66%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ + + D +LS + T+ DP+ W N A +L +E+ + N + + Sbjct: 13 LEQKVKNIASIIKPDELRVKLSEIETQENDPNFWNNAKNAAILGKEKTKITNLLKAYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ++A E D L+ ++ +++ + + LLSGE D+ +A + +H Sbjct: 73 FNALNDANELFDMANSESDDETLKALFEDAPKLEDSITSLEISMLLSGENDNKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +VVQCQ +RSQHKNKA A+ MLR++LYELEL K+E AN GE Sbjct: 253 VNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAAANSGE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+E+GWG QIRSYVL PYQ VKD R+N ++ +LDGD+ ++ L K Sbjct: 311 KSEMGWGHQIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363 >gi|23099950|ref|NP_693416.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831] gi|22778181|dbj|BAC14451.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831] Length = 327 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 167/321 (52%), Positives = 226/321 (70%), Gaps = 2/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ +++E + ++ + I++ L + + EL EE+D + + Sbjct: 3 DPSFWDDQNKAQSVIQETNGIKEYVNGFETIEENLENLEVSYELVKEENDQELFADLDAE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 LQ+ +V + + LLS D+N+A LE+H GAGGTESQDWA+MLLRMY RWAE+R FK Sbjct: 63 LQQFITDVNQFELQLLLSEPYDANNAILELHPGAGGTESQDWASMLLRMYQRWAEERNFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGLKSVTLIIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + D ++I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT ++V CQ ERSQ K Sbjct: 183 TPEMSDDVDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNIIVTCQNERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ A ML++KLY+LE++K R+E+ +I + EIGWG QIRSYV PY MVKD RT+ Sbjct: 243 NREAAMKMLKSKLYQLEVEKQRQELDDI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTDK 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DGD++ F+ A L Sbjct: 302 ETGNTQAVMDGDINPFIDAYL 322 >gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 365 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 161/346 (46%), Positives = 239/346 (69%), Gaps = 2/346 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +G D + + ++ ++ K +P W ++ +++ L ++ + L IS + I+ +LC++ Sbjct: 19 MGASLDIEGLKREVAEIDKKMAEPDFWNDLQKSQELSKKLKDLKELISEYESIE-KLCED 77 Query: 70 L-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L L+EL +EE D S+ QE + + + ++ + ++LLSG D N+A L +HAGAGGT Sbjct: 78 LNALIELGIEEGDESLSQEVHEEYKSLSKKINDMKIKTLLSGPYDRNNAILSIHAGAGGT 137 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW MLLRMY RWA + ++ E ++ G++AG+KS T+++KG AYG+LKGE GVH Sbjct: 138 EAQDWTEMLLRMYMRWASSKNYEVETVDYLPGDDAGVKSVTIMVKGAFAYGYLKGEAGVH 197 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+D+ RRHTSF+ + V P +DD I+++I D +IDTYR+SGAGGQHVN T+S Sbjct: 198 RLVRISPFDAAGRRHTSFALVEVLPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTES 257 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITHIPTG++VQCQ ERSQ +N+ A ML+AKL +L +++++E + E GW Sbjct: 258 AIRITHIPTGIIVQCQSERSQMQNRETAMKMLKAKLMDLMIKEQKEKIEDLKGEHKEAGW 317 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYV QPY +VKD RTN E + + V+DGD+D+F+ A L K Sbjct: 318 GNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGDIDEFINAYLKQK 363 >gi|149183327|ref|ZP_01861766.1| peptide chain release factor 2 [Bacillus sp. SG-1] gi|148848954|gb|EDL63165.1| peptide chain release factor 2 [Bacillus sp. SG-1] Length = 327 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 173/321 (53%), Positives = 225/321 (70%), Gaps = 4/321 (1%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSDN 91 P W + +A+ ++ E L ++ K++Q+ + +NL + LEL EE+D + +E + Sbjct: 4 PDFWNDQQQAQGVINEANGLKELVNEYKDMQE-MQENLEVTLELVKEENDAELQEELVEE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMY RWAEK+ FK Sbjct: 63 TKDLNKRLNEYELQLLLSEPHDKNNAILELHPGAGGTESQDWGSMLLRMYQRWAEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P ++ IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH PTGVVV CQ ERSQ K Sbjct: 183 MPEFNEEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHQPTGVVVTCQSERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ QA ML+AKLY+ ++++E E+A I + +IGWG QIRSYV PY MVKD RTN Sbjct: 243 NREQAMKMLKAKLYQKRIEEQEQELAEI-RGEQKDIGWGSQIRSYVFHPYSMVKDHRTNT 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DGD++ F+ A L Sbjct: 302 EMGNVQAVMDGDINGFINAYL 322 >gi|332160509|ref|YP_004297086.1| peptide chain release factor 2 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607022|emb|CBY28520.1| peptide chain release factor 2; programmed frameshift-containing [Yersinia enterocolitica subsp. palearctica Y11] gi|325664739|gb|ADZ41383.1| peptide chain release factor 2 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863446|emb|CBX73565.1| peptide chain release factor 2 [Yersinia enterocolitica W22703] Length = 289 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 206/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+GGTE+Q Sbjct: 7 LLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E GVHRLV Sbjct: 67 DWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Q Sbjct: 187 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 247 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 285 >gi|238763213|ref|ZP_04624178.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638] gi|238698486|gb|EEP91238.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638] Length = 289 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 206/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+GGTE+Q Sbjct: 7 LLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E GVHRLV Sbjct: 67 DWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWLRTETGVHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Q Sbjct: 187 ITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 247 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 285 >gi|330817652|ref|YP_004361357.1| peptide chain release factor 2 [Burkholderia gladioli BSR3] gi|327370045|gb|AEA61401.1| peptide chain release factor 2 [Burkholderia gladioli BSR3] Length = 299 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 213/280 (76%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L ELA EE+D L + ++ V +F + S AD N+ ++++ AGAGGTE+ Sbjct: 17 LFELAREENDEDTLLASEGEAAELEKRVAEIEFRRMFSNPADPNNCFIDIQAGAGGTEAC 76 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ + G AYG+L+ E G+HRLV Sbjct: 77 DWASMLLRQYLRYCERKGFKTEVLEESDGDVAGIKNATIKVTGDYAYGFLRTETGIHRLV 136 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS+ RHTSFSS++VYP +DDSIE+E++ +D RIDTYRASGAGGQH+N TDSAVR Sbjct: 137 RKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASGAGGQHINKTDSAVR 196 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + ESSKT++GWG Q Sbjct: 197 ITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWGHQ 256 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 257 IRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFIGASL 295 >gi|54297691|ref|YP_124060.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris] gi|53751476|emb|CAH12894.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris] Length = 335 Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 175/321 (54%), Positives = 229/321 (71%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E ++W N +A+ L RER L+ + + ++ + D L ELA EEDD + + D Sbjct: 9 ESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQTIIDIGD 68 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L+ I+ +V +F + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY RW E F Sbjct: 69 ELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLRWGEHHGF 128 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 TE +E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRHTSF++++ Sbjct: 129 TTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 188 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQCQ +RSQH Sbjct: 189 VSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQCQNDRSQH 248 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KNK QA LRAKLYELE+QK+ E++K++IGWG QIRSYVL + +KDLRT + Sbjct: 249 KNKDQAMKQLRAKLYELEMQKKNAEQQALEATKSDIGWGSQIRSYVLDQSR-IKDLRTGV 307 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E ++ VLDG LD F++A+L Sbjct: 308 ETSNTQAVLDGSLDQFIEASL 328 >gi|295097429|emb|CBK86519.1| bacterial peptide chain release factor 2 (bRF-2) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 293 Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 206/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VD+ I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDEDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|291287317|ref|YP_003504133.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM 12809] gi|290884477|gb|ADD68177.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM 12809] Length = 371 Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 176/350 (50%), Positives = 245/350 (70%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFL-NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L + +N + D + +S + N DP+ W N E+K+LM+E+ + E Sbjct: 13 LKKDINSFRTAMNEDELKKAISEVDNLSMSDPNFW-NSKESKVLMKEQAINKKKLEEWHE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D +L+EL +E + + + +++ ++ + + + + +LSG+ D N+A + + Sbjct: 72 LTGLLEDTEVLIEL-YKEGEQGVEADIETSIRTLEKTIAHFELKLVLSGQNDGNNAIITI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTE+ DWA ML RMYT +AE+ +K + L+ +GEEAGIK+AT+ IKG YG+L Sbjct: 131 NSGAGGTEANDWAAMLYRMYTHYAERNGYKCDILDYMEGEEAGIKNATINIKGAFTYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISPYDS +RRHTSF++++V P ++D IEI+ISE+D IDTYRASGAGGQ Sbjct: 191 KGETGVHRLVRISPYDSANRRHTSFAAVFVMPEIEDDIEIDISEADLHIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG VV CQ ERSQHKNKA A +L+++LYELE+ K+ E ES Sbjct: 251 HVNTTDSAVRITHVPTGTVVTCQSERSQHKNKAHAMKILKSRLYELEIDKKNEEKQKLES 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +KTEIGWG QIRSYV+ PY+MVKDLRT E + V+DG+LD F++A L Sbjct: 311 TKTEIGWGNQIRSYVMHPYKMVKDLRTRHETGNVDAVMDGNLDAFIRAYL 360 >gi|167462917|ref|ZP_02328006.1| peptide chain release factor 2 in translation [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383023|ref|ZP_08056853.1| peptide chain release factor 2-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153046|gb|EFX45506.1| peptide chain release factor 2-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 332 Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 171/321 (53%), Positives = 226/321 (70%), Gaps = 4/321 (1%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ + E + ++ + + D ++ +LA EEDD S+ E ++++ Sbjct: 4 PDFWDDQEKAQKTIAELNAIKGSVEQFQALSSEFGDIEVMAQLAEEEDDESLAAEVAESI 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + I ++E + + LLS D +A LE+H GAGGTESQDWA MLLRMY RWAEK FK Sbjct: 64 KGIVGKLEGFELQLLLSQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWAEKHDFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S V Sbjct: 124 EVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCDVV 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD +++EI D +IDTYRASGAGGQH+NTTDSAVRITHIPTG+VV CQ ERSQ KN Sbjct: 184 PEIDDDVDVEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQTERSQIKN 243 Query: 273 KAQAWNMLRAKLYELELQKREE-IANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 + +A +LR+KLYE +++++E+ +A I GE S +I WG QIRSYV PY MVKD RT+ Sbjct: 244 RERAMKLLRSKLYEKKIEEQEKHLAEIRGEQS--DIAWGSQIRSYVFHPYSMVKDHRTSA 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DGDLD F+ A L Sbjct: 302 ETGNAGAVMDGDLDMFIDAYL 322 >gi|260775420|ref|ZP_05884317.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC BAA-450] gi|260608601|gb|EEX34766.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC BAA-450] Length = 320 Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 168/317 (52%), Positives = 230/317 (72%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W A+ L +ER L+ + I +++ + D LLELA+EE+D E L Sbjct: 1 MWNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAE 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++E +F + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE Sbjct: 61 LEAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEV 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP Sbjct: 121 IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Sbjct: 181 IDDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA LRAKL+ELE+QK+ E +K++IGWG QIRSYVL + +KDLRT++E + Sbjct: 241 QAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTSVENRN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 300 TQAVLDGDLDKFIEASL 316 >gi|225851497|ref|YP_002731731.1| peptide chain release factor 2 [Persephonella marina EX-H1] gi|225646418|gb|ACO04604.1| peptide chain release factor 2 [Persephonella marina EX-H1] Length = 370 Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 168/350 (48%), Positives = 229/350 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + N + + D ++ L L+ + P W + +A+ + +R + N I I+ Sbjct: 11 QLENKFNNIKEILDPESLRGELFKLDQEMGRPDFWNDTKKAQEISSKRNAIANKIQEIES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D +EL E D E ++ + E+ + SLLS E D +A + + Sbjct: 71 VEKKINDIKEFIELLELEYDKETEDEIKREIEALDKEITKLETASLLSEEYDMKNAIVTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GG E+ DW MLLRMY RWAEK F E ++ + AGIKSAT ++KGP AYG+L Sbjct: 131 QAGSGGVEACDWTEMLLRMYLRWAEKNGFDVEMVDYQPDDVAGIKSATFIVKGPYAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N RRHTSFS++ V P + D +++EI E D RIDT+RASGAGGQ Sbjct: 191 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIGDEVKVEIKEEDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRI HIPTG+ V CQ ERSQ +N+A+A ML+AKLY+ EL+K++E E Sbjct: 251 HVNTTDSAVRIVHIPTGITVSCQSERSQIQNRAKALQMLKAKLYQYELEKQKEKQKELEG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV QPYQMVKDLRT E + V+DGD+D F+++ L Sbjct: 311 EKKDISWGSQIRSYVFQPYQMVKDLRTGYETGNIQAVMDGDIDPFIESYL 360 >gi|118602328|ref|YP_903543.1| peptide chain release factor 2 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567267|gb|ABL02072.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 364 Score = 335 bits (858), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 165/330 (50%), Positives = 227/330 (68%), Gaps = 1/330 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL + + E+P++W N +A++L +E+ L + K++ L D LL +A E+D Sbjct: 32 RLEEVLLEMENPNIWTNPDQAQVLGQEKSKLTSICQTFKQVNSVLEDAQELLNMAQTEND 91 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + D+L I+ +E +FE + SG+ D N AYL++ +G+GGTE+QDWA M+LRMY Sbjct: 92 EDTANDIIDDLDTIQSSIEKLEFERMFSGDLDVNSAYLDIQSGSGGTEAQDWAEMVLRMY 151 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RW EK FK + +E GE GIKSAT+ G A+GWL+ E G+HRLVR SP+++N + Sbjct: 152 LRWGEKHNFKVKLMETSAGEVTGIKSATIHFDGKYAFGWLRTEIGIHRLVRKSPFNANGK 211 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S++V P VD+ I+I+I+ D R+DTYRASGAGGQHVN T+SAVRITH+PT ++V Sbjct: 212 RHTSFCSVFVSPEVDNDIDIDINPLDLRVDTYRASGAGGQHVNKTESAVRITHLPTNIIV 271 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ RSQ NK QA L++KLYELE+QKR E K+ IGWG QIRSYVL + Sbjct: 272 QCQDGRSQRANKDQAMKQLKSKLYELEIQKRNAEKQSLEDKKSNIGWGHQIRSYVLDQSR 331 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +KDLRT +E T+ +DVLDG+LD F++A+L Sbjct: 332 -IKDLRTGVESTNTNDVLDGNLDQFIEASL 360 >gi|88607992|ref|YP_506484.1| peptide chain release factor 2, programmed frameshift [Neorickettsia sennetsu str. Miyayama] gi|123491729|sp|Q2GDG2|RF2_NEOSM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|88600161|gb|ABD45629.1| peptide chain release factor 2, programmed frameshift [Neorickettsia sennetsu str. Miyayama] Length = 365 Score = 335 bits (858), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 172/351 (49%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D + RL + + P LW++ A++L++E+ ++ ++ KE+ Sbjct: 12 LKKSVEVIRRQLDIEKKHSRLEEIQALVDSPTLWEDQSRAQLLLKEKSQIETSLKEFKEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +L D + ++ELA ++ + +++ L +K +++ K+ E L SGEAD ND LE+ Sbjct: 72 SIQLDDLIEMIELASKDHEEETMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQ 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGGTES DWA MLLRMYTRWAE KF+ + ++ +GEE GIKS TL + G NAYGW Sbjct: 132 SGAGGTESNDWAMMLLRMYTRWAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWA 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP+D+N++RHTSF+ I+V P ++ I I I E D +IDTYRASGAGGQ Sbjct: 192 RTETGVHRLVRISPFDANAKRHTSFAKIFVSPCIEGEINISIDEKDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+P+ +VVQ Q RSQH+NKA+A ML+++LYE+EL+K+EE N + Sbjct: 252 HVNKTESAIRITHLPSKIVVQSQSSRSQHQNKAEAMQMLKSRLYEIELRKKEEKLNAARN 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + IGWG QIRSYVL PYQM+KDLRT E + + VLDGDLD F+ AT++ Sbjct: 312 VEDSIGWGYQIRSYVLHPYQMIKDLRTGHEVGNITSVLDGDLDSFIIATIS 362 >gi|225027512|ref|ZP_03716704.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353] gi|224955151|gb|EEG36360.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353] Length = 371 Score = 335 bits (858), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 168/333 (50%), Positives = 235/333 (70%), Gaps = 4/333 (1%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +++ L ++ + W + +A+ + R+ ++L + +S ++ L D ++EL EE+ Sbjct: 32 EQIKELESEMREEGFWNDPDKAQEVTRKVKNLKDTVSAYHALELTLDDVSTMIELGNEEN 91 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S++ + + L ++E + + ++LLSGE D N+A + +HAGAGGTES DWA ML RM Sbjct: 92 DASVIPDIEELLGEFEIEFDNLKIQTLLSGEYDKNNAIVTLHAGAGGTESCDWAGMLYRM 151 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y++WA+ FKTE L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ Sbjct: 152 YSKWADSHGFKTEVLDYLDGDEAGIKSITFEVNGENAYGYLKSERGVHRLVRISPFNAAG 211 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +R TSF+S V P +++ + +EI++ D RIDTYRASGAGGQH+N TDSA+RITHIPTGVV Sbjct: 212 KRQTSFASCDVMPDIEEDLSVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHIPTGVV 271 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVLQ 318 VQCQ ERSQHKNK +A ML+AKLY + E + RE++++I GE S GWG QIRSYV+Q Sbjct: 272 VQCQNERSQHKNKDKAMQMLKAKLYLIKEQENREKLSDIRGEVSDN--GWGNQIRSYVMQ 329 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY MVKD RT E + V+DG+LD FM A L Sbjct: 330 PYTMVKDHRTGEETGNVQSVMDGNLDAFMNAYL 362 >gi|320530290|ref|ZP_08031358.1| peptide chain release factor 2 [Selenomonas artemidis F0399] gi|320137433|gb|EFW29347.1| peptide chain release factor 2 [Selenomonas artemidis F0399] Length = 368 Score = 335 bits (858), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 171/334 (51%), Positives = 227/334 (67%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++++ L K +P W + A+ + +E L + K + + D L E+ +EE+ Sbjct: 30 EKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKALAAKYEDAETLYEMGIEEN 89 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D ++ + L I +E Q E LLSGE D+N+A L +HAGAGGTE+QDW MLLRM Sbjct: 90 DPTMEGDIRAELDAIAEGLETLQLEVLLSGEYDANNAILTLHAGAGGTEAQDWTQMLLRM 149 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE+ F E ++ G+EAG+KSA+L IKG NAYG+LK E+GVHRLVRISP+DS + Sbjct: 150 YGRWAERHGFSVETADLQPGDEAGVKSASLFIKGHNAYGFLKSEKGVHRLVRISPFDSQA 209 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSFS+ V P +DD++E++I D R+D YRASGAGGQH+N T SAVR+TH PTG+V Sbjct: 210 RRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIV 269 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E + +I WG QIRSYV QPY Sbjct: 270 VQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGVQQKIEWGSQIRSYVFQPY 329 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 MVKD+RTN E + V+DG++D F++A L K Sbjct: 330 TMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363 >gi|315268921|gb|ADT95774.1| Peptide chain release factor 2 [Shewanella baltica OS678] Length = 365 Score = 335 bits (858), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 173/350 (49%), Positives = 235/350 (67%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + L G D+D +RL + + E +W + A+ L +ER L+ + I + Sbjct: 13 ELAERTQLLRGYLDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ Sbjct: 73 MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 361 >gi|57241933|ref|ZP_00369873.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195] gi|57017125|gb|EAL53906.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195] Length = 368 Score = 335 bits (858), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 171/334 (51%), Positives = 228/334 (68%), Gaps = 2/334 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 +LS + + DP+ W N A +L +E+ + N + + + L D L ++A E+D Sbjct: 32 KLSEIEMQENDPNFWNNAKNAAVLGKEKTKITNLLKAYENAFNALNDANELFDMANSEND 91 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 L+ ++ +++ + + LLSGE D+ +A + +H GAGGTES DWA+ML RMY Sbjct: 92 DETLKALFEDAPKLEDNITSLEISMLLSGENDNKNAIVSIHPGAGGTESNDWASMLYRMY 151 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+ E+ FK E L+ +G+EAG+K + L+KG NAYG+LK E G+HRLVR SP+DS R Sbjct: 152 LRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGR 211 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQHVN T+SAVRITHIPT +VV Sbjct: 212 RHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQHVNKTESAVRITHIPTNIVV 271 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ +RSQHKNKA A+ MLR++LYELEL K+E +AN GE K+E+GWG QIRSYVL PYQ Sbjct: 272 QCQNDRSQHKNKATAFKMLRSRLYELELMKQEAVANSGE--KSEMGWGHQIRSYVLFPYQ 329 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 VKD R+N ++ +LDGD+ ++ L K Sbjct: 330 QVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363 >gi|254508224|ref|ZP_05120348.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16] gi|219548841|gb|EED25842.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16] Length = 320 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 168/317 (52%), Positives = 229/317 (72%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W A+ L +ER L+ + I +++ + D LLELA+EE+D E L Sbjct: 1 MWNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAE 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++E +F + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE Sbjct: 61 LEAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEV 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP Sbjct: 121 IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Sbjct: 181 IDDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA LRAKL+ELE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 241 QAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 300 TQAVLDGDLDKFIEASL 316 >gi|312135785|ref|YP_004003123.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis OL] gi|311775836|gb|ADQ05323.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis OL] Length = 372 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 170/338 (50%), Positives = 233/338 (68%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D L +L ++T +P WQ++ ++ ++++ + L + I +++ + D +L Sbjct: 25 LDIDRLENELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLYSQWEDLKVLT 84 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL+LEE + + +E L ++ ++E + E LL+G D N+A L +HAGAGGTE+QDW Sbjct: 85 ELSLEEGNHDMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHAGAGGTEAQDW 144 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRI Sbjct: 145 AEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRI 204 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHVN T+SAVRI Sbjct: 205 SPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIK 264 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + +TEIGWG QIR Sbjct: 265 HIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIR 324 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 325 SYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 362 >gi|116748170|ref|YP_844857.1| peptide chain release factor 2 [Syntrophobacter fumaroxidans MPOB] gi|116697234|gb|ABK16422.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobacter fumaroxidans MPOB] Length = 312 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 156/292 (53%), Positives = 215/292 (73%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + + + L DN ++LE+ALEE+D +L++ ++ E+ + + LL E D +A + Sbjct: 7 QRLSEELRDNELMLEMALEEEDREVLKDVHRKALSLQKELRTVELQQLLGEENDDKNAIV 66 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 ++AGAGGTE+QDWA MLLRMY RW EK+ F + +++ +GEEAGIKS T + G +AYG Sbjct: 67 SINAGAGGTEAQDWAEMLLRMYLRWCEKKSFTVQMVDMLEGEEAGIKSGTFTVSGSHAYG 126 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LKGE G+HRLVRISP+D++ RRHTSF+++ V P VD+ IE+EI ++D RIDTYRASGAG Sbjct: 127 LLKGESGIHRLVRISPFDASGRRHTSFAAVLVIPEVDEKIEVEIKQADLRIDTYRASGAG 186 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T SAVRITH+PTG+VVQCQ E+SQH+N+ A +LRA+LYE E + ++E Sbjct: 187 GQHVNKTSSAVRITHLPTGIVVQCQNEKSQHRNRDIALKILRARLYEREKRAQQEKLQEA 246 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 S +I WG QIRSYVLQPY+++KD RT+IEK + VLDG++DDF++ L Sbjct: 247 HDSLDDIAWGNQIRSYVLQPYRLIKDHRTSIEKGNVEGVLDGEIDDFIEGYL 298 >gi|218291021|ref|ZP_03495062.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius LAA1] gi|218239039|gb|EED06244.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 167/321 (52%), Positives = 227/321 (70%), Gaps = 3/321 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A+ ++ E + + + ++ ++ L D + L+LA EEDD + E + Sbjct: 4 PDFWDDPDRAQKIISEMNGVKSVVDTMRRLESLLQDAEVALQLAQEEDDHDLFAEANRLA 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +++K E++ + + +LSGE D N+A LE+H GAGGTESQDWA+MLLRMYTRWAE +K Sbjct: 64 EQLKSEMDEFELQVMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEDHGYKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S+ V Sbjct: 124 EVLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVI 183 Query: 213 P-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + +D IEI + RIDTYR++GAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ + Sbjct: 184 PEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIQ 243 Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+A+A +L+++L ++RE E+A + + EI WG QIRSYV PY +VKD RTN Sbjct: 244 NRARAMEILKSRLAAKRREEREQELAQL-RGEQKEIAWGSQIRSYVFHPYSLVKDHRTNY 302 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E ++ V+DG++D F+ A L Sbjct: 303 ETSNTQAVMDGEIDPFIHAYL 323 >gi|307822369|ref|ZP_07652601.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96] gi|307736935|gb|EFO07780.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96] Length = 347 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 175/342 (51%), Positives = 249/342 (72%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E+P +W N EA+ L +ER L+ ++ I +++ L D Sbjct: 3 LGGIFDFDVKSERLVEVLRELENPKIWDNPEEAQALGKERGQLEVIVNTINDLERGLSDA 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL +A+EEDD ++ D+L+ + V +F + SG+ D+N+A+L++ +G+GGTE Sbjct: 63 EELLLMAVEEDDEETVETVVDDLEHFEKRVADLEFRRMFSGQMDANNAFLDIQSGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+++ RMY RW E++ FKTE +E G+ AGIKSAT+ +G A+GWL+ E GVHR Sbjct: 123 AQDWASIIERMYLRWGEQKGFKTELIEESQGDVAGIKSATIKFEGEYAFGWLRTETGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++V P +DD I+I+I+ +D R+D YRASGAGGQH+N T+SA Sbjct: 183 LVRKSPFDSGNRRHTSFASVFVSPEIDDDIDIDINPADIRVDVYRASGAGGQHINKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH PTG+VVQCQ +RSQHKN+ A L+AKLYELE++KR E A E +K++IGWG Sbjct: 243 VRMTHNPTGIVVQCQSDRSQHKNRDTAMKQLKAKLYELEMRKRSETAQALEDTKSDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E + VLDGDLD F++A+L Sbjct: 303 SQIRSYVLDQSR-IKDLRTNVETGNTQAVLDGDLDQFIEASL 343 >gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753] gi|156869337|gb|EDO62709.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753] Length = 374 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 159/321 (49%), Positives = 226/321 (70%), Gaps = 4/321 (1%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W ++ +++ +++ L N +S + + D L L+E+ EE+D SIL + + Sbjct: 44 PDFWDDMEKSQKIIQRTSMLKNKVSAYETLVSGYEDALTLIEMGDEEEDLSILPDAQQEV 103 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++++ E+E ++ +LL+GE D+N+A L HAGAGGTE+QDWA ML RMY RW E+ FK Sbjct: 104 EKVRKELEEQRLATLLTGEYDANNAILTFHAGAGGTEAQDWAEMLYRMYCRWGERHNFKV 163 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 + L+ DGEEAG+KSA +LI+G NAYG+LK E GVHRLVR+SP+D++ RRHTSF+S+ V Sbjct: 164 KTLDYLDGEEAGLKSAVVLIEGLNAYGYLKSEAGVHRLVRVSPFDASGRRHTSFASLEVM 223 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +++ +E+EI+ D ++D YRASGAGGQ VN T SAVR+THIPTG+VV CQ ERSQH+N Sbjct: 224 PEINEDVEVEIAPEDIKMDVYRASGAGGQKVNKTSSAVRLTHIPTGIVVSCQVERSQHQN 283 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGE--SSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 + A ML +KL +E+++RE + I + + EIGWG QIRSYV PY + KD RTN Sbjct: 284 REVAMKMLASKL--MEIKEREHLDKISDIKGVQKEIGWGSQIRSYVFMPYTLAKDHRTNY 341 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + + V+DGD+D F+ A L Sbjct: 342 EMGNINAVMDGDIDGFINAYL 362 >gi|238792836|ref|ZP_04636467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909] gi|238727944|gb|EEQ19467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909] Length = 289 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 164/280 (58%), Positives = 206/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+GGTE+Q Sbjct: 7 LLELAIEADDEETFNEAIAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E GVHRLV Sbjct: 67 DWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Q Sbjct: 187 ITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 247 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASL 285 >gi|95929408|ref|ZP_01312151.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684] gi|95134524|gb|EAT16180.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684] Length = 312 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 159/307 (51%), Positives = 220/307 (71%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +++ER L + + D +L+EL E +D + E + L ++ +V+ +F Sbjct: 1 MLKERTALQKLVDGWTSAAQTVEDLEVLVELGAESEDEATRDEVRELLPELERQVDKMEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +LSGE DS++A L ++AGAGGTE+QDWA+MLLRMY R+ + + FKT+ + G++AG Sbjct: 61 ARMLSGEHDSSNAILSINAGAGGTEAQDWADMLLRMYLRFCDIKGFKTKITDYQPGDDAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KS T ++G AYGWL+ E G+HRLVRISP+D+ S+RHTSF S++V+P +DDSIE+E+ Sbjct: 121 VKSVTFTVEGDYAYGWLRPEMGIHRLVRISPFDAASKRHTSFCSVFVFPELDDSIEVELL 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + D +IDT+RASGAGGQH+N TDSA+RITHIP+G+VV CQ +RSQH NKA+A L+A+L Sbjct: 181 DKDMKIDTFRASGAGGQHINKTDSAIRITHIPSGIVVACQDQRSQHNNKAEAIRQLKARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE QK+EE AN K EIGWG QIRSYVL PY+MVKD RT E + VLDG ++ Sbjct: 241 YELERQKKEEEANALSGDKKEIGWGSQIRSYVLHPYRMVKDHRTGFEVGNADSVLDGHIE 300 Query: 345 DFMKATL 351 F++A L Sbjct: 301 GFIEAYL 307 >gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus TK-6] gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus TK-6] gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6] Length = 369 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 174/338 (51%), Positives = 235/338 (69%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D + + L ++ + W++ +AK + + R+ L+ I + I+ L LL Sbjct: 23 MDISSMKEELKKIDMSMSSTNFWEDQGKAKEITQRRKWLEETIKEFERIKSTLETLQELL 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E EED + L ++ +Q ++ + + ++ LS E D N+AYL V AGAGGTE+ DW Sbjct: 83 EEVDEEDLET-LSMIAEEIQSVEKPIRDLEIKTFLSEEMDKNNAYLTVQAGAGGTEACDW 141 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLRMY RWAEK ++ E ++I+ + AGIKSATLLIKGP AYG+LKGE GVHRLVRI Sbjct: 142 ASMLLRMYRRWAEKHGYEVEVIDINPDDVAGIKSATLLIKGPYAYGYLKGESGVHRLVRI 201 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+N+RRHTSF+S+ V P +D+ I IEI E D +++T+RASGAGGQ+VN TD+AVRI Sbjct: 202 SPFDANARRHTSFASVSVVPQIDEKINIEIREEDIQMETFRASGAGGQYVNKTDTAVRIR 261 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+ V CQQERSQ +N+ +A +L+AKLY+LELQK EE E KT+IGWG QIR Sbjct: 262 HIPTGITVSCQQERSQFQNRLKALELLKAKLYQLELQKLEEKKKALEGEKTDIGWGYQIR 321 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV QPYQMVKDLRT +E + V+DGD+D F++ L Sbjct: 322 SYVFQPYQMVKDLRTGLEVGNVDAVMDGDIDSFIEEYL 359 >gi|332971716|gb|EGK10664.1| peptide chain release factor RF2 [Desmospora sp. 8437] Length = 331 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 173/321 (53%), Positives = 230/321 (71%), Gaps = 2/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ E HL + +KE+++ + ++ EL EEDD S+L E + Sbjct: 3 DPAFWNDQGKAQKVIDENNHLKGIVQGVKELEEAHEELQVIAELIAEEDDESMLPEAEEG 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ +K +++ + LLS D N A LE+H GAGGTESQDWA +LLRMYTRWAE R +K Sbjct: 63 LKDLKRKLDEFELSLLLSDPYDKNSAILELHPGAGGTESQDWAQILLRMYTRWAEHRGYK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ GEEAG+KS TLLIKG NAYG+L+ E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDFLPGEEAGVKSVTLLIKGHNAYGYLRAEKGVHRLVRISPFDSSGRRHTSFVSANV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P ++D EIEI D +IDTYR+SGAGGQHVNTTDSAVRITH+PT +VV CQ ERSQ K Sbjct: 183 MPEIEDDDEIEIRSEDIKIDTYRSSGAGGQHVNTTDSAVRITHLPTNIVVTCQSERSQIK 242 Query: 272 NKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ +A +L+A+L E ++ +K++EIA + + +TEIGWG QIRSYV PY MVKD RT + Sbjct: 243 NRDRAMKILKARLVERQMEEKQKEIAEL-KGEQTEIGWGNQIRSYVFHPYSMVKDHRTQV 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DG++D F++A L Sbjct: 302 EVGNVQSVVDGEIDTFIEAYL 322 >gi|261342293|ref|ZP_05970151.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC 35316] gi|288315634|gb|EFC54572.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC 35316] Length = 293 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 165/280 (58%), Positives = 205/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY RWAE R FKTE +E +GE AG+KS T+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLTRMYLRWAEARGFKTEIIEESEGEVAGLKSVTIKIIGDYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVNDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|212702489|ref|ZP_03310617.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098] gi|212674150|gb|EEB34633.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098] Length = 366 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 167/339 (49%), Positives = 225/339 (66%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD + QRL+ + T+ P+ W N L+RE++ L++ ++ + ++ Sbjct: 15 TTFGGVFDVAASEQRLAAIETELSRPNAWDNPEALTPLLREKRQLEDEVARLNALKTCHD 74 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D LELA+E + L+ + + ++ + LLSGE D+ DA LE+H GAGG Sbjct: 75 DMHEWLELAVESGEDEALESLAKQQDSLDALLDETELVMLLSGEEDNQDAILEIHPGAGG 134 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDWA MLLRMYTRWA +R F E L+ G+EAGIKS TL I GP+A+G+LK E+G+ Sbjct: 135 TESQDWAEMLLRMYTRWAARRHFTVEELDYLPGDEAGIKSVTLRISGPHAFGFLKSERGI 194 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D++ RRHTSF+S+ V P V D I+++I E+D R DT+R+SG GGQ VNTT Sbjct: 195 HRLIRISPFDASGRRHTSFASVDVMPDVGDDIQLDIKETDLRFDTFRSSGPGGQSVNTTS 254 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+ QCQ E+SQH NK A +L+A+LY LELQKRE + K I Sbjct: 255 SAVRVTHIPTGISAQCQNEKSQHHNKEAALCILKARLYNLELQKREAERAAQYAGKDAIA 314 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +G QIR+Y LQPY++VKD RTN E VLDG +D F Sbjct: 315 FGSQIRTYTLQPYRLVKDHRTNSECGDVEAVLDGQIDQF 353 >gi|82703392|ref|YP_412958.1| peptide chain release factor 2 [Nitrosospira multiformis ATCC 25196] gi|82411457|gb|ABB75566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosospira multiformis ATCC 25196] Length = 310 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 160/307 (52%), Positives = 225/307 (73%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + RE++ L++ + ++ I +L D L E+A EEDD + LQ + ++ ++ V +F Sbjct: 1 MGREKKILESVVINLETISRQLQDARELFEMAEEEDDDATLQSVARDISHLEKAVSDMEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D+N+ ++++ +G+GGTE+QDWA ML RMY R+ E+R ++ E +E GE AG Sbjct: 61 RRMFSNPMDTNNCFVDIQSGSGGTEAQDWAAMLERMYLRYCERRGYQVEVMEESPGEVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSA+L I G AYG+L+ E GVHRLVR SP+DS +RRHTSF+S++VYP VD++IEI+I+ Sbjct: 121 IKSASLKISGEYAYGYLRTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDETIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D R+DT+RASGAGGQH+N TDSAVRITH PTG+VVQCQ RSQH+N+A A ML+++L Sbjct: 181 PADLRVDTFRASGAGGQHINKTDSAVRITHNPTGIVVQCQSGRSQHRNRADAMAMLKSRL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE EL+KR E E +KT+IGWG QIRSYVL + +KDLRT +E + +LDGDLD Sbjct: 241 YEAELRKRNEEKQAIEDTKTDIGWGHQIRSYVLDQAR-IKDLRTGVESGNTQAILDGDLD 299 Query: 345 DFMKATL 351 DF++A+L Sbjct: 300 DFIEASL 306 >gi|295697362|ref|YP_003590600.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912] gi|295412964|gb|ADG07456.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912] Length = 382 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 170/349 (48%), Positives = 234/349 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ +G D ++++ + + W + A+ ++ E L + + ++ + Sbjct: 15 LVERLDEIGRSLDLAGKKKQIAGMEQRMAAADFWDDQEGAQKVIAEVNRLKDVVERVEGL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L EL EE D ++L E + ++ ++ + E +LSG D N+A +E+H Sbjct: 75 RSRVEDLEVLWELGHEEGDETVLGEIEAGITQVHSQLGQFELELMLSGPYDRNNAIVELH 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDW MLLRMYTRWAE R +K E L+ GEEAG+KS TLLIKG NAYG+LK Sbjct: 135 PGAGGTESQDWTAMLLRMYTRWAESRGYKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLK 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D++ RRHTSF+S+ V P +D+S++++I D +IDTYR+SGAGGQH Sbjct: 195 AERGVHRLVRISPFDASGRRHTSFASVDVLPELDESVDVDIRPEDLKIDTYRSSGAGGQH 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ KN+A A +L A+LYE +++EE Sbjct: 255 VNTTDSAVRITHIPTGIVVTCQSERSQIKNRATAMKILAARLYERRRREQEEQIAALRGE 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EI WG QIRSYV PY MVKD RT +E + V+DGD+D F+ A L Sbjct: 315 QKEIAWGSQIRSYVFHPYSMVKDHRTGVETGNVQAVMDGDIDAFIDAWL 363 >gi|260587039|ref|ZP_05852952.1| peptide chain release factor 2 [Blautia hansenii DSM 20583] gi|331082810|ref|ZP_08331932.1| peptide chain release factor 2 [Lachnospiraceae bacterium 6_1_63FAA] gi|260542529|gb|EEX23098.1| peptide chain release factor 2 [Blautia hansenii DSM 20583] gi|330400139|gb|EGG79788.1| peptide chain release factor 2 [Lachnospiraceae bacterium 6_1_63FAA] Length = 372 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 162/338 (47%), Positives = 234/338 (69%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D +N +R+ L + E P W N ++ +M+E L + ++Q++ + +++ Sbjct: 25 LDLENKEKRVEELEREMEAPGFWDNAERSQKMMKELSALKGDMEIYHKLQNQKEEIELMI 84 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ EE+D SI+ + + L + E+ + ++LLSGE D ++A + +HAGAGGTES DW Sbjct: 85 EMGYEENDPSIVPDIQEMLDEFIQDFEHIRIKTLLSGEYDKDNAIVTLHAGAGGTESCDW 144 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+ML RMY RWA+++ F TE L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRI Sbjct: 145 ASMLYRMYLRWADRQGFSTEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRI 204 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+++ +R TSF S V P +++ +++EI+ D RIDTYR+SGAGGQH+N T SA+RIT Sbjct: 205 SPFNAAGKRQTSFVSCDVMPDIEEDVDVEINPDDLRIDTYRSSGAGGQHINKTSSAIRIT 264 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+PTG+VVQCQ ERSQ +NK +A ML+AKLY L+ Q+ E+ + + TEIGWG QIR Sbjct: 265 HLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYLLKQQENEKKLSGIQGELTEIGWGNQIR 324 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV+QPY MVKD RTN E + V++G++D+F+ A L Sbjct: 325 SYVMQPYTMVKDHRTNEETGNVDAVMNGNIDNFINAYL 362 >gi|258591448|emb|CBE67749.1| Peptide chain release factor 2 (RF-2) [NC10 bacterium 'Dutch sediment'] Length = 334 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 164/318 (51%), Positives = 226/318 (71%), Gaps = 2/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ +M+E++ L + + + I L D +LL L EE+D L+E +L+ Sbjct: 7 FWADTSRAREIMKEQRALKDVVDQLVAIGGELDDLAVLLGLLREEEDPQALKELESSLRS 66 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ + + ++ E DS +A L ++ GAGGTESQDWA MLLRMY RWAE +KTE Sbjct: 67 LEGQIGALELTTFMAEEYDSGNAILSINPGAGGTESQDWAQMLLRMYLRWAETGSYKTEI 126 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +++ EEAGIKSAT+ + G AYG LK E GVHRLVRISP+D+N RRHTSF+S++VYP Sbjct: 127 IDLLPAEEAGIKSATVTVSGKYAYGRLKAEIGVHRLVRISPFDANHRRHTSFASVFVYPE 186 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++I++ I + D RIDTYR+SGAGGQHVN TDSAVRITH+PT +VV CQ ERSQHKNKA Sbjct: 187 IDETIDVAIDDKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTNIVVSCQNERSQHKNKA 246 Query: 275 QAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A +LRA+LY+ +++E E+A + E K +I WG QIRSYVL PYQ+VKD RT +E + Sbjct: 247 MAMKVLRARLYDHYRREQEKEMAKL-EGEKKDIAWGSQIRSYVLAPYQLVKDHRTGLETS 305 Query: 334 SPSDVLDGDLDDFMKATL 351 + VLDG+++ F+ A L Sbjct: 306 NVDKVLDGEIEPFIDAFL 323 >gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8] gi|7388057|sp|Q9X1R5|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8] Length = 369 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 168/352 (47%), Positives = 236/352 (67%), Gaps = 4/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + D + L + K DP +W + +A+ ++ + L N +K Sbjct: 14 ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D + +EL+ ++D + Q + +Q ++ V+ + E +L+G+ D N+AYL V Sbjct: 74 VRSLFEDLEVAIELS--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY RWAE++ F E +E GEEAGIK AT+LIKG AYG+L Sbjct: 132 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+S+ V P +DD ++IEI D +I+T+RASG GGQ Sbjct: 192 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300 +VN T+SAVRITH+PTG+VV CQ ERSQH+NK A +L+AKLY+LE++ KR EI I + Sbjct: 252 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEI-Q 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +I WG QIRSY+ PY MVKD RT +E + V+DGD+D F++A L Sbjct: 311 GELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELV 362 >gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2] gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10] gi|238688848|sp|B1LB88|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2] gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10] Length = 367 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 168/352 (47%), Positives = 236/352 (67%), Gaps = 4/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + D + L + K DP +W + +A+ ++ + L N +K Sbjct: 12 ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D + +EL+ ++D + Q + +Q ++ V+ + E +L+G+ D N+AYL V Sbjct: 72 VRSLFEDLEVAIELS--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY RWAE++ F E +E GEEAGIK AT+LIKG AYG+L Sbjct: 130 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+S+ V P +DD ++IEI D +I+T+RASG GGQ Sbjct: 190 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300 +VN T+SAVRITH+PTG+VV CQ ERSQH+NK A +L+AKLY+LE++ KR EI I + Sbjct: 250 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEI-Q 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +I WG QIRSY+ PY MVKD RT +E + V+DGD+D F++A L Sbjct: 309 GELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELV 360 >gi|299066996|emb|CBJ38191.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia solanacearum CMR15] Length = 300 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 215/280 (76%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L ELA EE D ++ + ++ VE +F + SG D+ + ++++ AGAGGTE+ Sbjct: 18 LFELAREEGDDDTIEAVETDTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEAC 77 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLR Y ++ E++ FKTE LE +G+ AGIKSA+L ++G A+G+L+ E GVHRLV Sbjct: 78 DWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGEYAFGFLRTETGVHRLV 137 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVR Sbjct: 138 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 197 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E+SKT++GWG Q Sbjct: 198 ITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAEADKLEASKTDVGWGHQ 257 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 258 IRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 296 >gi|254284237|ref|ZP_04959205.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B] gi|219680440|gb|EED36789.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B] Length = 280 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 158/277 (57%), Positives = 205/277 (74%), Gaps = 1/277 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EDD +Q +D++ + +E +F + SGE D +A+L++ AG+GGTE+QDWA Sbjct: 1 MAASEDDEETVQAVTDDMANLMQALEALEFRRMFSGEMDDANAFLDIQAGSGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RW E R FKT +E+ G+ AGIKSAT+ +G +GW++ E GVHRLVR S Sbjct: 61 EMLLRMYLRWGESRGFKTTLVEVSAGDVAGIKSATIQFEGEYPFGWIRTETGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS +RRHTSF+S++V P VDD+I+IEI+ +D R+DTYR+SGAGGQHVNTTDSAVRITH Sbjct: 121 PFDSGNRRHTSFASVFVSPEVDDNIDIEINPADLRVDTYRSSGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PT VV CQ ERSQH+N+ +A LRAKLYELE+QKR A E SK +IGWG QIRS Sbjct: 181 VPTNVVASCQTERSQHQNRDRAMKQLRAKLYELEIQKRNAEAQAMEDSKADIGWGSQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 YVLDDSR-IKDLRTGVETHNTQAVLDGDLDQFIEASL 276 >gi|28198320|ref|NP_778634.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1] gi|71897686|ref|ZP_00679931.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1] gi|182680959|ref|YP_001829119.1| peptide chain release factor 2 [Xylella fastidiosa M23] gi|28056390|gb|AAO28283.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1] gi|71732589|gb|EAO34642.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1] gi|182631069|gb|ACB91845.1| peptide chain release factor 2 [Xylella fastidiosa M23] gi|307579427|gb|ADN63396.1| peptide chain release factor 2 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 302 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 214/280 (76%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+LA E D +LQ +++ +L+VE +F+ + SG+ D +A++++ AGAGGTE+Q Sbjct: 11 FLDLAEIEQDQEMLQAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RWAE R +K E LE+ GE AGIKSAT ++G AYGWLK E GVHRLV Sbjct: 71 DWAEMLLRMYLRWAEGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS++RRHTSF+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSDNRRHTSFTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VV CQ ERSQH N+ +A ML AKLYE E+QKR ++ E+SK++IGWG Q Sbjct: 191 ITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YVL + +KDLRT +E++ VLDGDLD+F++A+L Sbjct: 251 IRNYVLDQSR-IKDLRTGVERSDTQKVLDGDLDEFIEASL 289 >gi|71892043|ref|YP_277773.1| peptide chain release factor 2 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796149|gb|AAZ40900.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 348 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 171/341 (50%), Positives = 228/341 (66%), Gaps = 6/341 (1%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD+D ++ ++ + + P +W+N AK+L ++ L I+ + ++ L D L Sbjct: 2 IFDYDLKIKHFKIISNELKSPGIWKNPKTAKILRQKSSSLKIFINIVDQLYKNLVDLNDL 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTES 130 LEL EE D +L E D Q I LE Q E + G+ D+++ Y+++ +G+GG E+ Sbjct: 62 LELT-EEYDNILLSEIHD--QSIDLERTLSQLEISRMFIGKYDNSNCYIDIQSGSGGIEA 118 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+MLLRMY RW + + F + +E GE GIKSAT+ + GP AYGWL+ E GVHRL Sbjct: 119 QDWASMLLRMYLRWIDHKGFMADVIEESTGEVTGIKSATIQVIGPYAYGWLRTESGVHRL 178 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RHTSF+S++VYP +DDSI I I D R D YRASGAGGQHVN T+SAV Sbjct: 179 VRKSPFDSAKKRHTSFASVFVYPELDDSINIHIRPEDLRCDVYRASGAGGQHVNRTESAV 238 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPT +V QCQ +RSQHKNK QA LRAKLYELELQK+ + ES+K I WG Sbjct: 239 RITHIPTNIVTQCQSDRSQHKNKNQAMKQLRAKLYELELQKKNYEKKMRESNKVNITWGN 298 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSY+L + VKDLRT EK + VL+GDLDDF++ ++ Sbjct: 299 QIRSYILDNSR-VKDLRTGFEKRNVKAVLNGDLDDFIRISI 338 >gi|27363990|ref|NP_759518.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6] gi|37678852|ref|NP_933461.1| protein chain release factor B [Vibrio vulnificus YJ016] gi|320157369|ref|YP_004189748.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O] gi|27360107|gb|AAO09045.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6] gi|37197593|dbj|BAC93432.1| protein chain release factor B [Vibrio vulnificus YJ016] gi|319932681|gb|ADV87545.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O] Length = 289 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 209/280 (74%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E +D E L+ ++ ++ +F + SG DS+D Y+++ AG+GGTE+Q Sbjct: 7 LLELAIEAEDQETFDEIGPELEALEEKLAGLEFRRMFSGAHDSSDCYIDLQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW +M+LRMY RWAE + FKTE +E+ +G+ AG+KS T+ I G AYGWL+ E GVHRLV Sbjct: 67 DWTSMMLRMYLRWAEAKGFKTEVIEVSEGDVAGLKSVTVRIIGDYAYGWLRTETGVHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSF+S +VYP +D++I+I+I+ +D RID YRASGAGGQHVNTT+SAVR Sbjct: 127 RKSPFDSGGRRHTSFASAFVYPEIDENIDIDINPADLRIDVYRASGAGGQHVNTTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG Q Sbjct: 187 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 247 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 285 >gi|289577756|ref|YP_003476383.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9] gi|289527469|gb|ADD01821.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9] Length = 368 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 172/354 (48%), Positives = 237/354 (66%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ ++ +G D + + + ++ K DP W ++ +++ L + ++ L + Sbjct: 11 KMFEEIKEMGVSLDIEGVKREVEEIDKKMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL LEE D SI +E + +K ++E + ++LL+G D N+A L + Sbjct: 71 LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GGTE+QDWA MLLRMYTRWA + F E L+ GEEAGIKS TL+IKGP AYG+L Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+ + V P ++D IE+EI D RIDTYRASGAGGQ Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGE 300 +VN T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L + +K+E+I ++ Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E WG QIRSYV QPY +VKD RTN E + V+DG++DDF+ A L K Sbjct: 311 EHK-EAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363 >gi|17545749|ref|NP_519151.1| peptide chain release factor 2 protein [Ralstonia solanacearum GMI1000] gi|17428043|emb|CAD14732.1| probable peptide chain release factor 2 (rf-2) protein [Ralstonia solanacearum GMI1000] Length = 300 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 215/280 (76%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L ELA EE D ++ + ++ VE +F + SG D+ + ++++ AGAGGTE+ Sbjct: 18 LFELAREEGDDDTIEAVEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEAC 77 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLR Y ++ E++ FKTE LE +G+ AGIKSA+L ++G A+G+L+ E GVHRLV Sbjct: 78 DWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGEYAFGFLRTETGVHRLV 137 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVR Sbjct: 138 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 197 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E+SKT++GWG Q Sbjct: 198 ITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAEADKLEASKTDVGWGHQ 257 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 258 IRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 296 >gi|299821880|ref|ZP_07053768.1| peptide chain release factor RF2 [Listeria grayi DSM 20601] gi|299817545|gb|EFI84781.1| peptide chain release factor RF2 [Listeria grayi DSM 20601] Length = 338 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 167/333 (50%), Positives = 228/333 (68%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R++ L + DP W + A+ ++ E L + +++++ + + LEL EE D Sbjct: 4 RIAELEDQMLDPSFWNDQQGAQTVINEANGLKDTYQAFHQLEEQQENLEVSLELLREELD 63 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + ++ + LQ E++ + + +LS D N+A LE+H GAGGTESQDW +MLLRMY Sbjct: 64 ADLKEQVEEELQTFVRELKDFELKMILSEPYDKNNAILEIHPGAGGTESQDWGSMLLRMY 123 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+A+K+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+G+HRLVRISP+DS+ R Sbjct: 124 QRFADKKGFKVEMLDYQAGDEAGIKSVTLLIKGLNAYGYLKAEKGIHRLVRISPFDSSGR 183 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S+ V P ++D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+TH+PTG+VV Sbjct: 184 RHTSFVSVDVMPELNDDIEIEVRPEDLKIDTYRATGAGGQHINTTDSAVRMTHLPTGIVV 243 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ QA ML+ KLY+ E +++E+ + EIGWG QIRSYV PY Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKEQELAAIRGEQKEIGWGSQIRSYVFHPYS 303 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 MVKD RT +E + V+DG++DDF+ A L K Sbjct: 304 MVKDHRTEVETGNTQAVMDGEIDDFINAYLRSK 336 >gi|88797976|ref|ZP_01113563.1| peptide chain release factor 2 [Reinekea sp. MED297] gi|88779173|gb|EAR10361.1| peptide chain release factor 2 [Reinekea sp. MED297] Length = 280 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 159/277 (57%), Positives = 211/277 (76%), Gaps = 1/277 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A+EEDD + + S+ L ++ ++E +F + SGE D ++AYL++ AG+GGTE+QDWA Sbjct: 1 MAVEEDDEGSVADVSEELAGLQRQLEELEFRRMFSGEMDPSNAYLDIQAGSGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RW E++ FKTE +E G+ AGIKSAT+ +G A+GWL+ E GVHRLVR S Sbjct: 61 EMLLRMYLRWGEEKGFKTELMEASAGDVAGIKSATVRFEGEYAFGWLRTETGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS +RRHTSFSS++V P +DD++EIEI+ +D RID YRASGAGGQHVN T+SAVRITH Sbjct: 121 PFDSGNRRHTSFSSVFVSPEIDDNVEIEINPADLRIDVYRASGAGGQHVNRTESAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 PTG+V QCQ +RSQHKNK QA L+AKLYE E+ +R+E A + E +K++IGWG QIRS Sbjct: 181 EPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEREMLQRQEAAQLVEDNKSDIGWGSQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 241 YVLDDAR-IKDLRTGVENRNTQAVLDGALDPFIEASL 276 >gi|254555779|ref|YP_003062196.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1] gi|300767562|ref|ZP_07077472.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179754|ref|YP_003923882.1| peptide chain release factor 2 [Lactobacillus plantarum subsp. plantarum ST-III] gi|254044706|gb|ACT61499.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1] gi|300494547|gb|EFK29705.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045245|gb|ADN97788.1| peptide chain release factor 2 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 357 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 169/343 (49%), Positives = 219/343 (63%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG FD D + + + +P W + A+ ++ E L K++ D + D Sbjct: 5 TLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVGD 64 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + EL EE D + E + Q + +++ + LL G D N+A LE+H GAGGT Sbjct: 65 LAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGGT 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDW MLLRMYTRWA FK E ++ G+EAGIKS TLLI G NAYG+L+ E+GVH Sbjct: 125 ESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGVH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+D+ RRHTSF+S+ V P +DD+++++I D +ID YRASGAGGQHVN T S Sbjct: 185 RLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTSS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV Q +RSQ +N+ A NMLRAKLYE E +K+ + + + +IGW Sbjct: 245 AVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGW 304 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYV PY MVKD RTN E V+DGDLD FM A L Sbjct: 305 GSQIRSYVFHPYTMVKDHRTNYESHDGQAVMDGDLDPFMDAYL 347 >gi|262401638|ref|ZP_06078204.1| peptide chain release factor 2 [Vibrio sp. RC586] gi|262352055|gb|EEZ01185.1| peptide chain release factor 2 [Vibrio sp. RC586] Length = 289 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 164/280 (58%), Positives = 212/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E +D E L+ ++ ++E +F + SG+ D++D YL++ AG+GGTE+Q Sbjct: 7 LLELAIEAEDQETFDEIGPELEELEAKLEQLEFRRMFSGDHDASDCYLDLQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRLV Sbjct: 67 DWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAVR Sbjct: 127 RKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E SK++IGWG Q Sbjct: 187 ITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDSKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 247 IRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASL 285 >gi|226314892|ref|YP_002774788.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599] gi|226097842|dbj|BAH46284.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599] Length = 370 Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 163/349 (46%), Positives = 234/349 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++L + G D +R+ L + P W + A+ + E + + + + ++ Sbjct: 16 MAKRLADIRGSLDLPVKQERIGELEERMLAPDFWDDNDAAQKTISELNAIKSLVETMAKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D ++LEL +EE D S++ + D+ Q ++ E + E LLS E D N+A LE+H Sbjct: 76 DSQYEDLQVMLELVIEEGDSSLIPDLYDSTQELRKSFESFELELLLSDEYDKNNAILELH 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRW + + FK E L+ G+EAG+KS TLLIKG NAYG+LK Sbjct: 136 PGAGGTESQDWASMLLRMYTRWGDAKGFKVETLDYLPGDEAGVKSVTLLIKGYNAYGYLK 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D++ RRHTSF S V P ++D ++I D ++DTYR+SGAGGQH Sbjct: 196 SEKGVHRLVRISPFDASGRRHTSFVSCNVLPEIEDDNVVDIRTEDLKVDTYRSSGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+P+G+VV CQ ERSQ KN+ +A ML A+L+E + +++E+ + Sbjct: 256 INTTDSAVRITHLPSGIVVTCQTERSQIKNRERAMKMLTARLFEKKREEQEKTLAAIQGE 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +I WG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L Sbjct: 316 QKDIAWGSQIRSYVFHPYSLVKDHRTNMEVGNVQAVMDGEIDSFIDAYL 364 >gi|28377601|ref|NP_784493.1| peptide chain release factor 2 [Lactobacillus plantarum WCFS1] gi|38258340|sp|Q88YL5|RF2_LACPL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|28270434|emb|CAD63336.1| peptide chain release factor 2, C-terminal fragment [Lactobacillus plantarum WCFS1] Length = 357 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 169/343 (49%), Positives = 219/343 (63%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG FD D + + + +P W + A+ ++ E L K++ D + D Sbjct: 5 TLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVGD 64 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + EL EE D + E + Q + +++ + LL G D N+A LE+H GAGGT Sbjct: 65 LAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGGT 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDW MLLRMYTRWA FK E ++ G+EAGIKS TLLI G NAYG+L+ E+GVH Sbjct: 125 ESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGVH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+D+ RRHTSF+S+ V P +DD+++++I D +ID YRASGAGGQHVN T S Sbjct: 185 RLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTSS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV Q +RSQ +N+ A NMLRAKLYE E +K+ + + + +IGW Sbjct: 245 AVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGW 304 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYV PY MVKD RTN E V+DGDLD FM A L Sbjct: 305 GSQIRSYVFHPYTMVKDHRTNYESHHGQAVMDGDLDPFMDAYL 347 >gi|254973803|ref|ZP_05270275.1| peptide chain release factor 2 [Clostridium difficile QCD-66c26] gi|260681922|ref|YP_003213207.1| peptide chain release factor 2 [Clostridium difficile CD196] gi|260685520|ref|YP_003216653.1| peptide chain release factor 2 [Clostridium difficile R20291] gi|260208085|emb|CBA60326.1| peptide chain release factor 2 [Clostridium difficile CD196] gi|260211536|emb|CBE01711.1| peptide chain release factor 2 [Clostridium difficile R20291] Length = 338 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 164/322 (50%), Positives = 236/322 (73%), Gaps = 2/322 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ +++E + L + + ++ L D +L+E+ LEEDD S+ ++ +++ Sbjct: 16 FWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIEKSIES 75 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + +K + Sbjct: 76 MEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKL 135 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI V P Sbjct: 136 LDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPE 195 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQH NK Sbjct: 196 LDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKD 255 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 +A +L AKL EL EL+++E+I +I + ++I WG QIRSYV QPY++VKD RTN E Sbjct: 256 RAMRLLMAKLIELKELEQKEKIEDI-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFG 314 Query: 334 SPSDVLDGDLDDFMKATLAIKK 355 + V++G++D F+ L + K Sbjct: 315 NVDSVMNGNIDLFINEYLKMNK 336 >gi|255091190|ref|ZP_05320668.1| peptide chain release factor 2 [Clostridium difficile CIP 107932] gi|255099304|ref|ZP_05328281.1| peptide chain release factor 2 [Clostridium difficile QCD-63q42] gi|255305089|ref|ZP_05349261.1| peptide chain release factor 2 [Clostridium difficile ATCC 43255] gi|255312847|ref|ZP_05354430.1| peptide chain release factor 2 [Clostridium difficile QCD-76w55] gi|255515606|ref|ZP_05383282.1| peptide chain release factor 2 [Clostridium difficile QCD-97b34] gi|255648700|ref|ZP_05395602.1| peptide chain release factor 2 [Clostridium difficile QCD-37x79] gi|306518820|ref|ZP_07405167.1| peptide chain release factor 2 [Clostridium difficile QCD-32g58] Length = 339 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 164/322 (50%), Positives = 236/322 (73%), Gaps = 2/322 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ +++E + L + + ++ L D +L+E+ LEEDD S+ ++ +++ Sbjct: 17 FWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIEKSIES 76 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + +K + Sbjct: 77 MEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKL 136 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI V P Sbjct: 137 LDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPE 196 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQH NK Sbjct: 197 LDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKD 256 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 +A +L AKL EL EL+++E+I +I + ++I WG QIRSYV QPY++VKD RTN E Sbjct: 257 RAMRLLMAKLIELKELEQKEKIEDI-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFG 315 Query: 334 SPSDVLDGDLDDFMKATLAIKK 355 + V++G++D F+ L + K Sbjct: 316 NVDSVMNGNIDLFINEYLKMNK 337 >gi|149924687|ref|ZP_01913037.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1] gi|149814444|gb|EDM74035.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1] Length = 354 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 169/350 (48%), Positives = 230/350 (65%), Gaps = 3/350 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++C GG+FD+ +RL T DP W++ A+ ++RE+ L + I ++Q + Sbjct: 1 MSC-GGIFDYAGKRERLEEYEIATGDPSFWEDNERAQKILREQSTLKKLVEQIDDVQQTI 59 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L EL EE D + E +NL + + +F +LSG D + A L ++AGAG Sbjct: 60 DDGRELYELGREESDTESIVEAWENLGQADALLGKLEFRRMLSGTHDEDSALLSINAGAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G +SQDWA MLLRMY RW E++ F + L+I +G++AGI+ A L I+G AYGWL+ E G Sbjct: 120 GVDSQDWAEMLLRMYQRWGERQGFDVKVLDIQEGDQAGIRGADLAIEGDYAYGWLRSEIG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS--IEIEISESDCRIDTYRASGAGGQHVN 244 VHRLVRISP+DS +RR TSF+SI V P + D EIE++ +D R+D YRASGAGGQHVN Sbjct: 180 VHRLVRISPFDSQARRQTSFASIMVLPDLGDGKDFEIEVNPADLRVDKYRASGAGGQHVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVR+TH PTG+VV CQ ERSQHKN A A ML+AKL++LE Q+R + + E K Sbjct: 240 KTESAVRLTHEPTGIVVACQMERSQHKNMATAMRMLKAKLWDLEQQRRSDEISALEGDKK 299 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYV+ PYQ V D RT +++ + VLDGDL +M+A L ++ Sbjct: 300 AIEWGSQIRSYVIHPYQQVNDHRTELKQGNVDAVLDGDLGSYMEAFLLMQ 349 >gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1] gi|166225119|sp|A5IM04|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga petrophila RKU-1] Length = 367 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 168/338 (49%), Positives = 232/338 (68%), Gaps = 5/338 (1%) Query: 17 DNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N V R + + K DP +W + +A+ ++ + L N +K ++ D + +EL Sbjct: 26 ENEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKRVRSLFEDLEVAIEL 85 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 + ++D + Q + +Q ++ V+ + E +L+G+ D N+AYL VH GAGGTESQDWA Sbjct: 86 S--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQ 143 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 MLLRMY RWAE++ F E +E GEEAGIK AT+LIKG AYG+LK E GVHRLVRISP Sbjct: 144 MLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISP 203 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +D+ RRHTSF+S+ V P +DD ++IEI D +I+T+RASG GGQ+VN T+SAVRITH+ Sbjct: 204 FDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHL 263 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRS 314 PTG+VV CQ ERSQH+NK A +L+AKLY+LE++K++ EI I + +I WG QIRS Sbjct: 264 PTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEI-QGELKDISWGNQIRS 322 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 YV PY MVKD RT +E + V+DGD+D F++A L Sbjct: 323 YVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELV 360 >gi|157164977|ref|YP_001467027.1| peptide chain release factor 2 [Campylobacter concisus 13826] gi|166223623|sp|A7ZE19|RF2_CAMC1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|112800036|gb|EAT97380.1| peptide chain release factor 2 [Campylobacter concisus 13826] Length = 366 Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 171/354 (48%), Positives = 232/354 (65%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL ++ +G + D+ RL + +DP WQ++ A L +E+ + N ++ + Sbjct: 12 KLQTKVENIGSIVKPDDIKARLKEIEAIEQDPDFWQDIARAGALNKEKTKISNMLAKFSD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L ELA E+D + ++ + + ++ + LLSGE D +A + + Sbjct: 72 ANQAVSDAKELFELANSENDEETINSLFEDAKNLDEKIVNLEISMLLSGEDDGKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + ++KG NAYG+ Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGENAYGYF 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P VDD IEIEI E D +IDTYRASGAGGQ Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEVDDDIEIEIEEKDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHIPTG+VVQCQ +RSQHKN+A A ML+++LYELEL K++E +N E Sbjct: 252 HVNKTESAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASNSVE- 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 311 -KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKMIEGVLIAQK 363 >gi|270290715|ref|ZP_06196939.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4] gi|270280775|gb|EFA26609.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4] Length = 343 Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 169/332 (50%), Positives = 223/332 (67%), Gaps = 2/332 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + +S K +P W + +A+ ++ E L K + D + + + LEL E Sbjct: 3 ESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLELLEMEA 62 Query: 81 DCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 D + E D L Q KL +Y+ LL+G+ D+N+A LE+H GAGGTESQDW +MLLR Sbjct: 63 DPDVQAEFEDELSQTAKLLRDYR-LGLLLNGKYDANNAILEIHPGAGGTESQDWGSMLLR 121 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MYTRWAE+ +FK + + GE AGI S T+ + G NAYG+L+ E+GVHRLVR+SP+DS Sbjct: 122 MYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYGYLRSEKGVHRLVRLSPFDSA 181 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 RRHTSF+S+ V P +DDS+E+ I+ D R+D YR+SGAGGQH+N T SAVRITH+PTG+ Sbjct: 182 GRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGI 241 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VV Q ERSQ +N+ A NML+AKL+ELE QK+ E E ++ EIGWG QIRSYV P Sbjct: 242 VVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWGSQIRSYVFHP 301 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y MVKD RTN+E + V+DGDLDDF+ A L Sbjct: 302 YSMVKDHRTNLETANVQGVMDGDLDDFINAYL 333 >gi|126697716|ref|YP_001086613.1| peptide chain release factor 2 [Clostridium difficile 630] gi|115249153|emb|CAJ66964.1| Peptide chain release factor 2 (RF-2) [Clostridium difficile] Length = 328 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 164/322 (50%), Positives = 236/322 (73%), Gaps = 2/322 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ +++E + L + + ++ L D +L+E+ LEEDD S+ ++ +++ Sbjct: 6 FWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIEKSIES 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + +K + Sbjct: 66 MEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKL 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI V P Sbjct: 126 LDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQH NK Sbjct: 186 LDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKD 245 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 +A +L AKL EL EL+++E+I +I + ++I WG QIRSYV QPY++VKD RTN E Sbjct: 246 RAMRLLMAKLIELKELEQKEKIEDI-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFG 304 Query: 334 SPSDVLDGDLDDFMKATLAIKK 355 + V++G++D F+ L + K Sbjct: 305 NVDSVMNGNIDLFINEYLKMNK 326 >gi|259046384|ref|ZP_05736785.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175] gi|259036929|gb|EEW38184.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175] Length = 361 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 164/347 (47%), Positives = 231/347 (66%), Gaps = 2/347 (0%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +L+ +GGLFD D + ++ + +P W + +A ++++ L + +++ Sbjct: 3 KLSAIGGLFDLDRLEEDIAAYEQEMSEPSFWDDSEKANQVIQKNNELKSIYDTFHKMELA 62 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + +L E+ EE D + E + +Q ++ +++ + LL+G D N A LE+H GA Sbjct: 63 HEETSLLFEMYKEEPDEEVHAEIVEAIQSLEKDLQRYELSMLLNGPHDKNSAILEIHPGA 122 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTESQDW +MLLRMY RWAEK ++ E ++ DG+EAGIKS TL I+G NAYG+L+ E+ Sbjct: 123 GGTESQDWGSMLLRMYMRWAEKHGYRVETVDYQDGDEAGIKSVTLSIEGLNAYGYLRSEK 182 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+D+ +RHTSF S+ V P +D I+IEI+ D ++D YRASGAGGQH+N Sbjct: 183 GVHRLVRISPFDAAGKRHTSFCSVDVVPQMDGDIDIEINPDDLKVDVYRASGAGGQHINK 242 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKT 304 T SAVRITHIPTG+V Q Q +RSQ KN+ QA ML+AKL++LE +K+ E+A I + Sbjct: 243 TSSAVRITHIPTGIVTQSQAQRSQFKNRDQAMAMLKAKLFQLEEEKKAAELAAI-RGEQK 301 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIR+YV PY MVKDLR+ E + V+DGDLD FM A L Sbjct: 302 DIAWGSQIRNYVFHPYSMVKDLRSGYETGNIGAVMDGDLDSFMDAYL 348 >gi|260771797|ref|ZP_05880715.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14] gi|260613089|gb|EEX38290.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14] Length = 320 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 165/317 (52%), Positives = 223/317 (70%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W A+ L +ER L + I +++ + D LLELA+E D E L+ Sbjct: 1 MWNEPERAQALGKERSSLQAVVETINQLEQGVDDVEGLLELAIEAQDQETFDEVLPELEE 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ +F + SG+ D+ Y+++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE Sbjct: 61 LEAKLAQLEFRRMFSGDHDAAHCYIDLQAGSGGTEAQDWTSMLLRMYLRWADDKGFKTEV 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S +VYP Sbjct: 121 IEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++I ++I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Sbjct: 181 IDENIAVDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA LRAKL+ELELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 241 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 300 TQAVLDGDLDKFIEASL 316 >gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp. 18P13] Length = 375 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 163/347 (46%), Positives = 236/347 (68%), Gaps = 2/347 (0%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 QL LG + A L L + W + +++ +M++ + L+N + + + + Sbjct: 17 QLKELGDVLQVARAQSELDDLRIQVTYDGFWDDAEKSQKVMQKIRKLENTVDKFRHLNQK 76 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D + L++L +EEDD S +E +++ K E+E ++ +LL+GE D ++A L HAGA Sbjct: 77 LEDTIALIDLCMEEDDDSSNEEILQDVESFKEELEAEKLSTLLTGEYDGSNAILTFHAGA 136 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA ML RMY RWAE+ FK L+ DG+EAG+KSA++L++G NAYG+LK E Sbjct: 137 GGTEAQDWAQMLYRMYNRWAERHDFKVSLLDYLDGDEAGLKSASMLVEGQNAYGFLKSEA 196 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR+SP+D++ RRHTSF+++ V P +DDS+E++I D ++D +R+SGAGGQH+N Sbjct: 197 GVHRLVRVSPFDASGRRHTSFAALEVMPEIDDSMEVDIRLEDVKMDVFRSSGAGGQHINK 256 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKT 304 T SAVR+THIPTG+VV CQ +RSQ +N+ A MLR+KL E+ E + E+I++I + + Sbjct: 257 TSSAVRLTHIPTGIVVSCQTQRSQFQNRDFAMKMLRSKLVEIKEREHLEKISDI-KGVQK 315 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EI WG QIRSYV PY + KD RT E + S V+DGDLD F+ A L Sbjct: 316 EIAWGAQIRSYVFMPYTLAKDHRTGFENGNISAVMDGDLDGFINAYL 362 >gi|262037715|ref|ZP_06011157.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264] gi|261748187|gb|EEY35584.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264] Length = 348 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 171/346 (49%), Positives = 235/346 (67%), Gaps = 4/346 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD D+ ++ + KT +P W N ++ ++E L I ++I D Sbjct: 5 GGIFDLDSLNLKIERIEKKTAEPDFW-NRENSQETLKELNILKKLIEEYEKISGMNEDVS 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +++E +E D S +E D + + E++ + + LL + DSN+A L ++AGAGGTE+ Sbjct: 64 VMIEF-IEAGDDSFEKELDDKIDTVTEEIQNFKTKLLLDEKYDSNNAILTINAGAGGTEA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW ML RMY RW+ ++ FK E L+ GEEAGIKS TL IKG AYG+LKGE+GVHRL Sbjct: 123 CDWTEMLYRMYDRWSNRKDFKVEVLDSLSGEEAGIKSITLNIKGSYAYGYLKGEKGVHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN +RHTSF+++ V P +DD +E+ I D ++DTYRASGAGGQHVNTTDSAV Sbjct: 183 VRISPFDSNGKRHTSFTAVNVVPEIDDDVEVNIRPEDLKVDTYRASGAGGQHVNTTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309 RITHIPT VV CQ+ERSQ KNK A +L+++L+E+EL+KRE E+ NI + ++++I WG Sbjct: 243 RITHIPTNTVVTCQKERSQLKNKETAMKILKSRLFEIELEKREKEMENI-KGTESKIEWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYV QPY+MVKD RT E+ + V+DGD+D F+ L K Sbjct: 302 SQIRSYVFQPYKMVKDHRTKAEEGNVDKVMDGDIDSFINEYLKFYK 347 >gi|224499863|ref|ZP_03668212.1| peptide chain release factor 2 [Listeria monocytogenes Finland 1988] gi|284802947|ref|YP_003414812.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578] gi|284996088|ref|YP_003417856.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923] gi|284058509|gb|ADB69450.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578] gi|284061555|gb|ADB72494.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923] Length = 338 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 170/330 (51%), Positives = 220/330 (66%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R++ L + DP+ W + A+ ++ E +++ I LEL EE D Sbjct: 4 RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY Sbjct: 64 EDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV Sbjct: 184 RHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E + V+DGDLDDF+ A L Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYL 333 >gi|270157123|ref|ZP_06185780.1| peptide chain release factor 2 [Legionella longbeachae D-4968] gi|289164472|ref|YP_003454610.1| peptide chain release factor 2 [Legionella longbeachae NSW150] gi|269989148|gb|EEZ95402.1| peptide chain release factor 2 [Legionella longbeachae D-4968] gi|288857645|emb|CBJ11485.1| putative peptide chain release factor 2 [Legionella longbeachae NSW150] Length = 336 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 170/321 (52%), Positives = 229/321 (71%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E +W N A+ L RE+ L+ +S + ++ + D L E+A EE D + E S+ Sbjct: 9 ESSTIWDNPEVAQALGREQTQLEALVSTLTQLGQSITDLNELFEMAREESDEQTINEISE 68 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 LQ ++ +V +F + SG+ D ++AYL++ +G+GGTE+QDWA MLLRMY RW E+ F Sbjct: 69 ELQTVEKKVADLEFRRMFSGKMDDSNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEQHGF 128 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 TE +E G+ AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHTSF++++ Sbjct: 129 TTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 188 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +DD I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQCQ +RSQH Sbjct: 189 VSPEIDDDIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQCQTDRSQH 248 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + +KDLRT + Sbjct: 249 RNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLDQSR-IKDLRTGV 307 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E ++ VLDG LD F++A+L Sbjct: 308 ETSNTQAVLDGALDQFIEASL 328 >gi|154148037|ref|YP_001406088.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381] gi|238686699|sp|A7I0P7|RF2_CAMHC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|153804046|gb|ABS51053.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381] Length = 364 Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 160/330 (48%), Positives = 221/330 (66%), Gaps = 2/330 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL+ + +DP LW + +A + RE+ + N ++ K+ Q+ L D ELA+ E+D Sbjct: 32 RLAEIEKTEQDPALWVDAKKAAQIGREKTKISNILAKFKKAQNELNDAKEFYELAVSEND 91 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + E ++ + + +LSGE D +A + +H GAGGTE +DWA ML RMY Sbjct: 92 GETINELFRESAKLSENIANLELSMMLSGENDDKNAIINIHPGAGGTEGEDWAGMLYRMY 151 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+ E+ +K E L+ +G+EAGIK ++KG NAYG+LK E G+HRLVRISP+DS R Sbjct: 152 VRFCERVGYKIEILDFQEGDEAGIKDVNFIVKGENAYGYLKVESGIHRLVRISPFDSAGR 211 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF+S+ V P +DD I+I I E D RID YR+SGAGGQHVN T+SAVRITHIPT +VV Sbjct: 212 RHTSFASVVVSPELDDDIQINIDEKDLRIDYYRSSGAGGQHVNKTESAVRITHIPTNIVV 271 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ +R QHKNKA A +L+++LYELE K++E +N ++ K++I WG QIR+YVL PYQ Sbjct: 272 QCQNDRDQHKNKASAMKVLKSRLYELEKLKKQEESN--KTPKSDIAWGYQIRNYVLFPYQ 329 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKDLR+NI + +LDGD+ ++ L Sbjct: 330 QVKDLRSNIAYSQAEAILDGDIKKILEDVL 359 >gi|296330264|ref|ZP_06872745.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676131|ref|YP_003867803.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii str. W23] gi|296152532|gb|EFG93400.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414375|gb|ADM39494.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii str. W23] Length = 327 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 168/323 (52%), Positives = 218/323 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ E + + ++ K++ D + + +L EE D + E Sbjct: 3 DPEFWNDQQKAQTVINEANGIKDYVNSYKKLNDSHEELQMTHDLLKEEPDSDLQLELEKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R FK Sbjct: 63 LKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K Sbjct: 183 MPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGD+D F+ A L K Sbjct: 303 MGNVQAVMDGDIDTFIDAYLRSK 325 >gi|297544050|ref|YP_003676352.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841825|gb|ADH60341.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 368 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 171/354 (48%), Positives = 237/354 (66%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ ++ +G D + + + ++ + DP W ++ +++ L + ++ L + Sbjct: 11 KMFEEIKEMGVSLDIEGVKREIEEIDKEMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL LEE D SI +E + +K ++E + ++LL+G D N+A L + Sbjct: 71 LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GGTE+QDWA MLLRMYTRWA + F E L+ GEEAGIKS TL+IKGP AYG+L Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+ + V P ++D IE+EI D RIDTYRASGAGGQ Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGE 300 +VN T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L + +K+E+I ++ Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E WG QIRSYV QPY +VKD RTN E + V+DG++DDF+ A L K Sbjct: 311 EHK-EAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363 >gi|307297404|ref|ZP_07577210.1| peptide chain release factor 2 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916664|gb|EFN47046.1| peptide chain release factor 2 [Thermotogales bacterium mesG1.Ag.4.2] Length = 370 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 165/352 (46%), Positives = 237/352 (67%), Gaps = 6/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + D + ++L + + DP +W + EA L RE Q + I +++ Sbjct: 12 ELKEKFDSIRATLDLERIDEKLKEIEKRMSDPSIWNDQREASNLGREAQSYRSTIELLRD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ I +EL+ E D S ++ + ++ + +V + LLSGE D N+ ++ + Sbjct: 72 VEEEFESIEIAVELSGE--DESYVKHVEELVRSAEKKVREFELTILLSGEYDINNCFISI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+ML+RMY RWAE +FK ++ GEEAGIKS T+ + GP+AYG + Sbjct: 130 HPGAGGTESQDWASMLMRMYMRWAEANRFKITIVDELPGEEAGIKSVTINLAGPHAYGKM 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+N RRHTSF+S+ V+P +D+ EIEI D +IDTYR+ GAGGQ Sbjct: 190 KFEAGVHRLVRISPFDANHRRHTSFASVSVFPEMDEVPEIEIRPEDLKIDTYRSGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIG 299 HVN TDSAVRITH+PTG+VV CQ ERSQH+NKA A ML AKL+E+E++K+ E++ +G Sbjct: 250 HVNKTDSAVRITHLPTGIVVACQTERSQHQNKANAMKMLYAKLFEIEIEKKRSEKLKLMG 309 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + EI WG QIRSYV QPY +VKD RT+ E V++G++D+F++ L Sbjct: 310 D--QKEISWGNQIRSYVFQPYTLVKDHRTDFETGDIQSVMNGEIDEFIEKEL 359 >gi|42784339|ref|NP_981586.1| peptide chain release factor 2 [Bacillus cereus ATCC 10987] gi|42740270|gb|AAS44194.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus ATCC 10987] Length = 380 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 171/350 (48%), Positives = 228/350 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G D ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376 >gi|290892673|ref|ZP_06555665.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071] gi|290557733|gb|EFD91255.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071] gi|307572036|emb|CAR85215.1| peptide chain release factor 2 [Listeria monocytogenes L99] Length = 338 Score = 332 bits (851), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 170/330 (51%), Positives = 220/330 (66%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R++ L + DP+ W + A+ ++ E +++ I LEL EE D Sbjct: 4 RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY Sbjct: 64 EDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV Sbjct: 184 RHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E + V+DGDLDDF+ A L Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYL 333 >gi|146283094|ref|YP_001173247.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501] gi|145571299|gb|ABP80405.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501] Length = 270 Score = 332 bits (850), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 157/260 (60%), Positives = 201/260 (77%), Gaps = 1/260 (0%) Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++R++ +E +F + S E D N+ YL++ AG+GGTE+QDWAN+LLRMY RWA+KR F Sbjct: 8 VERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFS 67 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E +E+ +GE AGIK AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V Sbjct: 68 AEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFV 127 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH Sbjct: 128 SPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHA 187 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK A MLRAKLYELE+QKR + E SK++IGWG QIRSYVL + +KDLRT +E Sbjct: 188 NKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVLDDSR-IKDLRTGVE 246 Query: 332 KTSPSDVLDGDLDDFMKATL 351 ++ VLDGDLD +++A+L Sbjct: 247 RSDCQKVLDGDLDGYLEASL 266 >gi|224552865|gb|ACN55074.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. 'Ames Ancestor'] Length = 365 Score = 332 bits (850), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 171/350 (48%), Positives = 227/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G D ++++ L K W + A+ ++ E L + + ++ Sbjct: 12 KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N A LE+ Sbjct: 72 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 361 >gi|294624919|ref|ZP_06703574.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666711|ref|ZP_06731947.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600798|gb|EFF44880.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603536|gb|EFF46951.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 313 Score = 332 bits (850), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 166/300 (55%), Positives = 217/300 (72%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L+ + I ++ L D LLELA E D +L + VE +F+ + SG+ Sbjct: 2 LEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDNYQAHVEKLEFQRMFSGQ 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+ GE AGIKSAT+ Sbjct: 62 MDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVR 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D Sbjct: 122 IEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTD 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ A ML AKLYELE+QK Sbjct: 182 VYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E++K++IGWG QIR+YVL + +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 242 RNAEKDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 300 >gi|296272007|ref|YP_003654638.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299] gi|296096182|gb|ADG92132.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299] Length = 364 Score = 332 bits (850), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 159/317 (50%), Positives = 219/317 (69%), Gaps = 2/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V A + E+ + + +S K+ + L L E+ALEE D + + Sbjct: 45 FWNDVETATKIGIEKNRILSKLSKFKKANESLSGTNELYEMALEEKDEDTFELLHGEAEE 104 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + + + +LS DS++A + +H GAGGTESQDWA+ML RMY RWAE+ FK E Sbjct: 105 LDNLIRSTEISVMLSNPDDSSNAIISIHPGAGGTESQDWASMLYRMYLRWAERMDFKIEV 164 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+ DGEEAG+K + +IKG NAYG+LK E G+HRLVRISP+DSN++RHTSF+S+ V P Sbjct: 165 LDYQDGEEAGLKDVSFIIKGENAYGYLKAENGIHRLVRISPFDSNAKRHTSFASVMVSPE 224 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD+I+I + + D RIDTYR+SGAGGQHVN T+SA+RITHI T +VVQCQ +RSQHKNKA Sbjct: 225 IDDNIDIVVEDKDIRIDTYRSSGAGGQHVNKTESAIRITHIATNIVVQCQNDRSQHKNKA 284 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+++LYE EL+K++ + + E K+EIGWG QIRSYV+QPYQ +KD R+NI ++ Sbjct: 285 SAMKMLKSRLYEYELEKQQAVKDGVE--KSEIGWGHQIRSYVMQPYQQIKDTRSNIGYSN 342 Query: 335 PSDVLDGDLDDFMKATL 351 +LDGD+ ++ L Sbjct: 343 VEAILDGDITKMIEDVL 359 >gi|302872499|ref|YP_003841135.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis OB47] gi|302575358|gb|ADL43149.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis OB47] Length = 372 Score = 331 bits (849), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 168/338 (49%), Positives = 233/338 (68%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D L +L ++T +P WQ++ ++ ++++ + L + I +++ + D +L Sbjct: 25 LDIDRLQSELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLCSQWEDLKVLT 84 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL++EE + + +E L ++ ++E + E LL+G D N+A L +HAGAGGTE+QDW Sbjct: 85 ELSIEEGNHEMAEELEKELLDLEKKIEDFKIEVLLNGPYDKNNAILSIHAGAGGTEAQDW 144 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRI Sbjct: 145 AEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKAEKGVHRLVRI 204 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHVN T+SAVRI Sbjct: 205 SPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIK 264 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + +T+IGWG QIR Sbjct: 265 HIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTDIGWGNQIR 324 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 325 SYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 362 >gi|167628822|ref|YP_001679321.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1] gi|167591562|gb|ABZ83310.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1] Length = 333 Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 166/321 (51%), Positives = 219/321 (68%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P W + A+ M+E L + + ++++ + D +L EL EE+D IL E Sbjct: 3 QEPGFWDDTERAQKTMQELTGLKDKVKAYRDLRSQWEDLCVLRELGAEENDAEILAEIEA 62 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 +Q I E++ E LL+G D N+A L +HAGAGGTE+ DW MLLRMY RW EKR + Sbjct: 63 GIQTITAELDRWHLELLLNGPYDRNNALLTLHAGAGGTEAMDWNEMLLRMYIRWGEKRGY 122 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E L+ G+EAGIKSATL + G NAYG+LKGE GVHRLVRISP+DS+ RRHTSF+S+ Sbjct: 123 KVELLDSLPGDEAGIKSATLSVVGENAYGYLKGEMGVHRLVRISPFDSSGRRHTSFASLE 182 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P V D EI+I D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VV CQ ERSQ Sbjct: 183 VLPEVSDGAEIQIRPEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVACQSERSQI 242 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+A A ML+AKL+E + Q++E N + + +I +G QIRSYV PY +VKD RTN Sbjct: 243 QNRATAMRMLQAKLFERQRQEQEAEVNRLKGDQQDIAFGSQIRSYVFHPYNLVKDHRTNT 302 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DG+LD+F+ A L Sbjct: 303 EVGNVHAVMDGELDEFISAYL 323 >gi|296452520|ref|ZP_06894217.1| peptide chain release factor RF2 [Clostridium difficile NAP08] gi|296881068|ref|ZP_06905011.1| peptide chain release factor RF2 [Clostridium difficile NAP07] gi|296258625|gb|EFH05523.1| peptide chain release factor RF2 [Clostridium difficile NAP08] gi|296427934|gb|EFH13838.1| peptide chain release factor RF2 [Clostridium difficile NAP07] Length = 338 Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 163/322 (50%), Positives = 236/322 (73%), Gaps = 2/322 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ +++E + L + + ++ L D +L+E+ LEE+D S+ ++ +++ Sbjct: 16 FWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVERDIEKSIES 75 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + +K + Sbjct: 76 MEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKL 135 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI V P Sbjct: 136 LDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPE 195 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQH NK Sbjct: 196 LDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKD 255 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 +A +L AKL EL EL+++E+I +I + ++I WG QIRSYV QPY++VKD RTN E Sbjct: 256 RAMRLLMAKLIELKELEQKEKIEDI-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFG 314 Query: 334 SPSDVLDGDLDDFMKATLAIKK 355 + V++G++D F+ L + K Sbjct: 315 NVDSVMNGNIDLFINEYLKMNK 336 >gi|62259280|gb|AAX77849.1| unknown protein [synthetic construct] Length = 360 Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 171/327 (52%), Positives = 231/327 (70%), Gaps = 3/327 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 L + ED +W N A+ L +++ L+N + + I + L LLEL E+ S+ Sbjct: 24 MLEMELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEED--ESL 81 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 +QE + + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RW Sbjct: 82 MQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRW 141 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A+ FK ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHT Sbjct: 142 ADSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHT 201 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q Sbjct: 202 SFASVFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQ 261 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 +RSQHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + +K Sbjct: 262 SDRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IK 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 DLRT +E T+ VLDGDLD F++A+L Sbjct: 321 DLRTGVENTNTQAVLDGDLDKFIEASL 347 >gi|313683376|ref|YP_004061114.1| bacterial peptide chain release factor 2 (brf-2) [Sulfuricurvum kujiense DSM 16994] gi|313156236|gb|ADR34914.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfuricurvum kujiense DSM 16994] Length = 369 Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 175/349 (50%), Positives = 240/349 (68%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ + G+ RLS + W + A ++ +E+ L+ ++ + Sbjct: 13 LTTKMQNVTGVVRPQEISARLSEIEALENSDGFWNDAAAAGVIQKEKTQLERRLAKYSKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D + L E+A EE D ++ + ++ V+ + E LLSGE DS++A + +H Sbjct: 73 FNTLGDAVDLYEMAKEEGDEETIESLFADAGSLENNVKSMEVEVLLSGEHDSHNAIVTIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRWAE+ F E L+ GEEAGIK A LLIKG N YG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYTRWAERHDFTVEMLDYQAGEEAGIKDAALLIKGVNVYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISPYDS ++RHTSF+S+ V P +DD I+I+I + D RIDTYRASGAGGQH Sbjct: 193 NENGIHRLVRISPYDSAAKRHTSFTSVMVSPELDDDIDIDIEDRDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELE++K++ A + Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELEMEKKQ--AAVDGIE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+E GWG QIRSYVL PYQ VKD R+ I ++ S++LDGD+D+ ++ L Sbjct: 311 KSENGWGHQIRSYVLAPYQQVKDTRSGIPYSNISNILDGDIDEMIEGVL 359 >gi|312126885|ref|YP_003991759.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor hydrothermalis 108] gi|311776904|gb|ADQ06390.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor hydrothermalis 108] Length = 370 Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 170/338 (50%), Positives = 231/338 (68%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D L L ++T P WQ++ ++ ++++ + L + I +++ + D +L Sbjct: 23 LDIDRLESELKSLESETSRPDFWQDLENSQKVLQKIKRLKDKIERFQKLYSQWEDLKVLT 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL+LEE + + +E L ++ ++E + E LL+G D N+A L +HAGAGGTE+QDW Sbjct: 83 ELSLEEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHAGAGGTEAQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRI Sbjct: 143 AEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHVN T+SAVRI Sbjct: 203 SPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIK 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + +TEIGWG QIR Sbjct: 263 HIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 323 SYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 360 >gi|221311479|ref|ZP_03593326.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. 168] gi|221315806|ref|ZP_03597611.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320721|ref|ZP_03602015.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325006|ref|ZP_03606300.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. SMY] gi|321313075|ref|YP_004205362.1| peptide chain release factor 2 [Bacillus subtilis BSn5] gi|320019349|gb|ADV94335.1| peptide chain release factor 2 [Bacillus subtilis BSn5] Length = 327 Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 168/323 (52%), Positives = 218/323 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 3 DPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELEKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R FK Sbjct: 63 LKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K Sbjct: 183 MPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGD+D F+ A L K Sbjct: 303 MGNVQAVMDGDIDTFIDAYLRSK 325 >gi|56707356|ref|YP_169252.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis SCHU S4] gi|110669826|ref|YP_666383.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis FSC198] gi|224456424|ref|ZP_03664897.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370940|ref|ZP_04986945.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis FSC033] gi|254874190|ref|ZP_05246900.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis MA00-2987] gi|54112809|gb|AAV29038.1| NT02FT0149 [synthetic construct] gi|56603848|emb|CAG44824.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320159|emb|CAL08207.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis FSC198] gi|151569183|gb|EDN34837.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis FSC033] gi|254840189|gb|EET18625.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis MA00-2987] Length = 325 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 170/321 (52%), Positives = 229/321 (71%), Gaps = 3/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L +++ L+N + + I + L LLEL E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T+ VLDGDLD F++A+L Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321 >gi|255654235|ref|ZP_05399644.1| peptide chain release factor 2 [Clostridium difficile QCD-23m63] Length = 339 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 163/322 (50%), Positives = 236/322 (73%), Gaps = 2/322 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ +++E + L + + ++ L D +L+E+ LEE+D S+ ++ +++ Sbjct: 17 FWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVERDIEKSIES 76 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + +K + Sbjct: 77 MEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKGYKVKL 136 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI V P Sbjct: 137 LDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASIDVTPE 196 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQH NK Sbjct: 197 LDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQHLNKD 256 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 +A +L AKL EL EL+++E+I +I + ++I WG QIRSYV QPY++VKD RTN E Sbjct: 257 RAMRLLMAKLIELKELEQKEKIEDI-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNAEFG 315 Query: 334 SPSDVLDGDLDDFMKATLAIKK 355 + V++G++D F+ L + K Sbjct: 316 NVDSVMNGNIDLFINEYLKMNK 337 >gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745] gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus pentosaceus ATCC 25745] Length = 343 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 166/332 (50%), Positives = 223/332 (67%), Gaps = 2/332 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + +S K +P+ W N +A++++ E L K + D + + + EL ED Sbjct: 3 ESISVNEAKMAEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEMED 62 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + E L ++ + LL+G+ D+N+A +E+H GAGGTESQDW +MLLRM Sbjct: 63 DPDVQSEFESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQDWGSMLLRM 122 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTRWAE+ +FK + + GE AGI S T+ I G NAYG+L+ E+GVHRLVR+SP+DS Sbjct: 123 YTRWAEQHQFKVQIEDYQAGEVAGISSVTMRIVGHNAYGYLRSEKGVHRLVRLSPFDSAG 182 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ V P +DDS+E+ I++ D R+D YR+SGAGGQH+N T SAVRITH+PTG+V Sbjct: 183 RRHTSFASVDVMPELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIV 242 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319 V Q ERSQ +N+A A +ML+AKL+ELE QK+ EE A I E + EIGWG QIRSYV P Sbjct: 243 VASQAERSQLQNRATAMSMLKAKLFELEEQKKAEEKAKI-EGIQLEIGWGSQIRSYVFHP 301 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y MVKD R+N E + V+DGD DDF+ A L Sbjct: 302 YSMVKDHRSNFETANVQGVMDGDFDDFINAYL 333 >gi|241667458|ref|ZP_04755036.1| peptide chain release factor 2 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876005|ref|ZP_05248715.1| peptide chain release factor [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842026|gb|EET20440.1| peptide chain release factor [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 325 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 171/321 (53%), Positives = 229/321 (71%), Gaps = 3/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L R++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL ++G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T+ VLDGDLD F++A+L Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321 >gi|237729831|ref|ZP_04560312.1| peptide chain release factor 2 [Citrobacter sp. 30_2] gi|226908437|gb|EEH94355.1| peptide chain release factor 2 [Citrobacter sp. 30_2] Length = 310 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 171/307 (55%), Positives = 218/307 (71%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ + + ++ L D LLELA+E DD E L ++ ++ +F Sbjct: 1 MGKERSSLEAIVDTLDQMSQGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E +GE AG Sbjct: 61 RRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKS T+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ Sbjct: 121 IKSVTIRIAGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDG LD Sbjct: 241 YELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLD 299 Query: 345 DFMKATL 351 F++A+L Sbjct: 300 QFIEASL 306 >gi|311107121|ref|YP_003979974.1| peptide chain release factor [Achromobacter xylosoxidans A8] gi|310761810|gb|ADP17259.1| peptide chain release factor 2 [Achromobacter xylosoxidans A8] Length = 300 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 156/286 (54%), Positives = 215/286 (75%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D+ L ELA +DD + L+ + + ++E +F + S AD + +L++ AGA Sbjct: 12 LADSNELFELAASDDDDATLESIEQDADAFQEKLEALEFRRMFSNPADPLNCFLDIQAGA 71 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLR Y ++AE++ FK E LE DG+ AG+KSAT+ I+G A+G+L+ E Sbjct: 72 GGTEAQDWASMLLRQYLKYAERKGFKAEVLEESDGDVAGLKSATIKIEGEYAFGYLRTET 131 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D R+DTYRASGAGGQH+N Sbjct: 132 GVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINK 191 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SKT+ Sbjct: 192 TDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTD 251 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 252 VGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 296 >gi|210615399|ref|ZP_03290526.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787] gi|210150248|gb|EEA81257.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787] Length = 313 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 161/306 (52%), Positives = 218/306 (71%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L + + + ++ D +L+E+A +E+D S+L E L + E + + Sbjct: 1 MKELKSLKDFLEKVSQLTTSYEDIGVLIEMAYDENDESLLPEIESELTAFQQGYEEIRIQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE D ++A + +HAGAGGTES DWANML RMYTRWAE++ F E L+ DG+ AG+ Sbjct: 61 TLLSGEYDKDNAIVTLHAGAGGTESCDWANMLYRMYTRWAERKGFSVEVLDFLDGDVAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T + G NAYG+LK E+GVHRLVRISP+++ +R TSF+S V P ++D I+IE+++ Sbjct: 121 KAVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDDIDIELND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYRASGAGGQHVN T SA+RITHIPTG+VVQCQ ERSQH NK +A ML+AKLY Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHIPTGIVVQCQNERSQHNNKEKAMQMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++ E + EIG+G QIRSYV+QPY +VKD RTN+E + S VLDG++D Sbjct: 241 LLKEQEQAEKVSDIRGEIKEIGFGNQIRSYVMQPYTLVKDHRTNVESGNVSSVLDGNIDL 300 Query: 346 FMKATL 351 FM A L Sbjct: 301 FMNAYL 306 >gi|300704641|ref|YP_003746244.1| peptide chain release factor rf-2; programmed frameshift [Ralstonia solanacearum CFBP2957] gi|299072305|emb|CBJ43638.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia solanacearum CFBP2957] Length = 300 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 157/280 (56%), Positives = 214/280 (76%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L ELA EE D ++ + ++ VE +F + SG D+ + ++++ AGAGGTE+ Sbjct: 18 LFELAREEGDDDTIEAIETDTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEAC 77 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSA++ ++G A+G+L+ E GVHRLV Sbjct: 78 DWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLV 137 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVR Sbjct: 138 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 197 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E+SKT++GWG Q Sbjct: 198 ITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAEADKLEASKTDVGWGHQ 257 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 258 IRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIQASL 296 >gi|227486641|ref|ZP_03916957.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC 51172] gi|227235353|gb|EEI85368.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC 51172] Length = 329 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 167/322 (51%), Positives = 224/322 (69%), Gaps = 2/322 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA--LEEDDCSILQETSD 90 P+ W N +A+ +M + + +I+D + DN L++L +ED+ L+E Sbjct: 3 PNFWDNSDKAQTVMADLSDKKEDLKAYTDIEDAIKDNKDLIDLVELSDEDESKTLEEVDS 62 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 NL++IK + + ++ L+GE D N+AYL ++AGAGG E+ DWA+ML RMYTR+ EKR F Sbjct: 63 NLKQIKKSLASLKLKTQLNGEYDKNNAYLSINAGAGGLEATDWADMLFRMYTRYCEKRGF 122 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E ++++ E GIKS TL +KGP AYG+LKGE+GVHRLVRISP+DS SRRHTSFSS+ Sbjct: 123 KVEVKDLNNEEAGGIKSVTLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHTSFSSVD 182 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +D+ IEI SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV Q ERSQ Sbjct: 183 VFPELDEDTSIEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAERSQM 242 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ A N+L +KL +++ ++++E + S ++I WG QIRSYV QPY MVKD RTN Sbjct: 243 QNRETAMNLLISKLIQIKEEEKKEKIEDIQGSYSQIAWGSQIRSYVFQPYTMVKDHRTNY 302 Query: 331 EKTSPSDVLDGDLDDFMKATLA 352 E + V+DGD+ F+ A LA Sbjct: 303 EMGNVEAVMDGDIQGFIDAYLA 324 >gi|319427481|gb|ADV55555.1| peptide chain release factor 2, PrfB [Shewanella putrefaciens 200] Length = 365 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 171/350 (48%), Positives = 234/350 (66%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + L G D+D +RL + + E +W A+ L +ER L+ + I + Sbjct: 13 ELAERTQLLRGYLDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EE+D ET+ L ++ + +F + SG D+++ YL++ Sbjct: 73 MDSGLEDVEGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E Sbjct: 253 HVNRTESAVRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K++IGWG QIRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDKFIEASL 361 >gi|300692007|ref|YP_003753002.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia solanacearum PSI07] gi|299079067|emb|CBJ51729.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia solanacearum PSI07] Length = 300 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 157/280 (56%), Positives = 215/280 (76%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L ELA EE D ++ + ++ VE +F + SG D+ + ++++ AGAGGTE+ Sbjct: 18 LFELAREEGDDDTVEAVEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEAC 77 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLR Y ++ E++ FKTE LE +G+ AGIKSA++ ++G A+G+L+ E GVHRLV Sbjct: 78 DWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLV 137 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVR Sbjct: 138 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 197 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIP+G+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E+SKT++GWG Q Sbjct: 198 ITHIPSGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAEADKLEASKTDVGWGHQ 257 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 258 IRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDTFIEASL 296 >gi|288554120|ref|YP_003426055.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4] gi|288545280|gb|ADC49163.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4] Length = 328 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 169/320 (52%), Positives = 225/320 (70%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A+ ++ E L ++ E++++ + + EL EE D + +E + Sbjct: 4 PDFWDDQEAAQTVINESNGLKEQVNVFLELEEKYENLEVSYELVKEEADEELEKELEAGV 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + + + + LLS D N+A LE+H GAGGTESQDWA+MLLRMYTRW+E+R FK Sbjct: 64 KELISRLNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWSEQRGFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 124 ETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD++EI+I D ++DTYRASGAGGQH+NTTDSA+RITH+PT VV CQ ERSQ KN Sbjct: 184 PELDDNVEIDIRTEDLKVDTYRASGAGGQHINTTDSAIRITHLPTNTVVTCQSERSQIKN 243 Query: 273 KAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 + QA ML+AKLY+LE++K ++E+A I + EIGWG QIRSYV PY +VKD RTN E Sbjct: 244 RDQAMKMLKAKLYQLEIEKQQQELAEI-RGEQKEIGWGSQIRSYVFHPYSLVKDHRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + + V+DGDLD F+ A L Sbjct: 303 IGNTNAVMDGDLDGFINAYL 322 >gi|328675334|gb|AEB28009.1| Peptide chain release factor 2 [Francisella cf. novicida 3523] Length = 325 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 170/321 (52%), Positives = 229/321 (71%), Gaps = 3/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L +++ L+N + + I + L LLELA E+ +++QE + Sbjct: 4 EDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETLSELLELAEED--ETLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQDVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K + DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T+ VLDGDLD F++A+L Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321 >gi|118496781|ref|YP_897831.1| peptide chain release factor 2 [Francisella tularensis subsp. novicida U112] gi|194324538|ref|ZP_03058310.1| peptide chain release factor 2 [Francisella tularensis subsp. novicida FTE] gi|118422687|gb|ABK89077.1| peptide chain release factor 2 [Francisella novicida U112] gi|194321373|gb|EDX18859.1| peptide chain release factor 2 [Francisella tularensis subsp. novicida FTE] Length = 325 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 172/321 (53%), Positives = 229/321 (71%), Gaps = 3/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L +++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELAEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K + DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + VKDLRT + Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-VKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T+ VLDGDLD F++A+L Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321 >gi|254372144|ref|ZP_04987636.1| peptide chain release factor 2 [Francisella tularensis subsp. novicida GA99-3549] gi|151569874|gb|EDN35528.1| peptide chain release factor 2 [Francisella novicida GA99-3549] Length = 325 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 171/321 (53%), Positives = 228/321 (71%), Gaps = 3/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L +++ L+N + + I + L LLEL E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLNELLELGEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K I DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T+ VLDGDLD F++A+L Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321 >gi|332297634|ref|YP_004439556.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168] gi|332180737|gb|AEE16425.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168] Length = 378 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 166/318 (52%), Positives = 217/318 (68%), Gaps = 1/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W+N +A+ +M + + L N I +++ + D L EL +E D S+ E + Sbjct: 44 FWENPAKAEKVMTDIKQLKNRIEPWRDLIAAVDDAEALYELGMESGDESLEAELKAAYDQ 103 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E + +LLSGE D N A+L +HAGAGGTE+ DWA ML RMY RWAE+R FK E Sbjct: 104 AQAEYDRLSILNLLSGEVDRNGAFLTIHAGAGGTEACDWAQMLCRMYVRWAERRGFKVET 163 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +++ + E GIKS TL I G AYG+LK E G+HRLVRISP+DSN+RRHTSFSS++V+PV Sbjct: 164 VDMLEAE-GGIKSVTLQISGEYAYGYLKSEAGIHRLVRISPFDSNARRHTSFSSVYVFPV 222 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD+IE++I D R+DTYRA GAGGQHVN TDSAVR TH+PTG+VV CQ ERSQ N+A Sbjct: 223 LDDTIEVDIRPEDLRVDTYRAGGAGGQHVNKTDSAVRFTHLPTGIVVACQTERSQTMNRA 282 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A +MLRA+LYE +++E+ S K +I WG QIRSYV QPY MVKD RT E + Sbjct: 283 TAMSMLRARLYEYYREQKEKENAKFASEKKDISWGNQIRSYVFQPYTMVKDHRTKHEIGN 342 Query: 335 PSDVLDGDLDDFMKATLA 352 V+DG +D F++A LA Sbjct: 343 IQSVMDGAIDPFIEAFLA 360 >gi|89100645|ref|ZP_01173503.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911] gi|89084669|gb|EAR63812.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911] Length = 328 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 168/319 (52%), Positives = 218/319 (68%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P+ W + A++++ E L + + ++ + + + EL EE D + E ++ L Sbjct: 4 PNFWDDQKAAQVVISESNALKDQVHEFHDLYETFENLELTYELVKEESDEDLQNELAEEL 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ FK Sbjct: 64 TELTKRLAQFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 124 ETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +D IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ KN Sbjct: 184 PEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQIKN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + +A ML+AKLY+ +++++E+ + EIGWG QIRSYV PY MVKD RT+ E Sbjct: 244 RERAMKMLQAKLYQKKIEEQEQELLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTSTES 303 Query: 333 TSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 304 GNVQGVMDGDLDPFINAYL 322 >gi|254497462|ref|ZP_05110255.1| peptide chain release factor 2 [Legionella drancourtii LLAP12] gi|254353277|gb|EET12019.1| peptide chain release factor 2 [Legionella drancourtii LLAP12] Length = 335 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/321 (53%), Positives = 225/321 (70%), Gaps = 1/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E +W N A+ L RER L+N + + + + D L ELA EE+D + E Sbjct: 9 ESSTVWNNPEVAQALGRERTQLENVVFTLSGLSQSIIDLTELFELAREENDEQAINEIGA 68 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L+ I+ +V +F + SG D +AYL++ +G+GGTE+QDWA MLLRMY RW E+ F Sbjct: 69 ELETIEQKVADLEFRRMFSGRMDGCNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEQHGF 128 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 TE +E G+ AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHTSF++++ Sbjct: 129 TTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVF 188 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQCQ +RSQH Sbjct: 189 ISPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQCQNDRSQH 248 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + +KDLRT + Sbjct: 249 RNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLDQSR-IKDLRTGV 307 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E ++ VLDG LD F++A+L Sbjct: 308 ETSNTQAVLDGALDQFIEASL 328 >gi|208780604|ref|ZP_03247943.1| peptide chain release factor 2 [Francisella novicida FTG] gi|254373627|ref|ZP_04989111.1| peptide chain release factor 2 [Francisella novicida GA99-3548] gi|151571349|gb|EDN37003.1| peptide chain release factor 2 [Francisella novicida GA99-3548] gi|208743579|gb|EDZ89884.1| peptide chain release factor 2 [Francisella novicida FTG] Length = 325 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/321 (53%), Positives = 228/321 (71%), Gaps = 3/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L +++ L+N + + I + L LLEL E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K I DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T+ VLDGDLD F++A+L Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321 >gi|296127692|ref|YP_003634944.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563] gi|296019508|gb|ADG72745.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563] Length = 367 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/352 (48%), Positives = 234/352 (66%), Gaps = 6/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q L G D D+ +R+ ++ + W + I+A+ LM+ER L + I ++ + Sbjct: 13 IKEQSEILRGYLDPDSIYKRVKEIDEISAKDDFWNDNIKAQKLMKERMLLLDKIEPVENL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYL 119 + L+E+A+E +D + +E LQR+ E+E K +L SGE DS +AYL Sbjct: 73 IKNSNNIYELVEMAIESNDIEMEKELEGECIELQRVFDELETK---NLFSGEFDSKNAYL 129 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 ++AGAGGTES DWA+ML RMY R+ E+ F E + G+EAGIK + ++G AYG Sbjct: 130 TLNAGAGGTESCDWASMLSRMYVRFCERHGFTVEITDELPGDEAGIKQISFYVQGLYAYG 189 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+EI+ SD R+DTYRASGAG Sbjct: 190 YLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVEINPSDLRVDTYRASGAG 249 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T SA+RITHIPT +VVQCQ ERSQH NK A ML+AKLY+LE K ++ Sbjct: 250 GQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKDKLDKEKQKI 309 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KT+I WG QIRSYV QPYQMVKDLRT E + + V+DG++D+F+ A L Sbjct: 310 AGEKTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYL 361 >gi|296158326|ref|ZP_06841157.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1] gi|295891270|gb|EFG71057.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1] Length = 280 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 158/277 (57%), Positives = 212/277 (76%), Gaps = 1/277 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EE D + L + Q I+ V +F + S AD N+A+L++ AGAGGTE+ DWA Sbjct: 1 MAREEGDEATLLACESDAQGIEQRVADMEFRRMFSNPADPNNAFLDIQAGAGGTEACDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GVHRLVR S Sbjct: 61 AMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 121 PFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+E + E+ KT++GWG QIRS Sbjct: 181 MPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL + +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 241 YVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 276 >gi|83748475|ref|ZP_00945497.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia solanacearum UW551] gi|207725248|ref|YP_002255644.1| peptide chain release factor 2 (rf-2) protein [Ralstonia solanacearum MolK2] gi|207743623|ref|YP_002260015.1| peptide chain release factor 2 (rf-2) protein [Ralstonia solanacearum IPO1609] gi|83724886|gb|EAP72042.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia solanacearum UW551] gi|206590482|emb|CAQ37444.1| peptide chain release factor 2 (rf-2) protein [Ralstonia solanacearum MolK2] gi|206595022|emb|CAQ61949.1| peptide chain release factor 2 (rf-2) protein [Ralstonia solanacearum IPO1609] Length = 300 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 157/280 (56%), Positives = 214/280 (76%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L ELA EE D ++ + ++ VE +F + SG D+ + ++++ AGAGGTE+ Sbjct: 18 LFELAREEGDDDTIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTEAC 77 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSA++ ++G A+G+L+ E GVHRLV Sbjct: 78 DWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHRLV 137 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH+N TDSAVR Sbjct: 138 RKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVR 197 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E+SKT++GWG Q Sbjct: 198 ITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAEADKLEASKTDVGWGHQ 257 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 258 IRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIQASL 296 >gi|226225057|ref|YP_002759164.1| peptide chain release factor 2 [Listeria monocytogenes Clip81459] gi|258611946|ref|ZP_05243310.2| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503] gi|293596308|ref|ZP_05230370.2| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194] gi|293596920|ref|ZP_05265609.2| peptide chain release factor 2 [Listeria monocytogenes HPB2262] gi|300764992|ref|ZP_07074980.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017] gi|225877519|emb|CAS06233.1| Putative peptide chain release factor 2 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258607352|gb|EEW19960.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503] gi|293583807|gb|EFF95839.1| peptide chain release factor 2 [Listeria monocytogenes HPB2262] gi|293594612|gb|EFG02373.1| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194] gi|300514292|gb|EFK41351.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017] gi|332312939|gb|EGJ26034.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott A] Length = 338 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 169/330 (51%), Positives = 220/330 (66%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R++ L + DP+ W + A+ ++ E +++ I LEL EE D Sbjct: 4 RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY Sbjct: 64 EDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV Sbjct: 184 RHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E + V+DGDLD+F+ A L Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDEFINAYL 333 >gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis] gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis] Length = 341 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 162/331 (48%), Positives = 229/331 (69%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R++ L DP W++ +A+ M+E L + + ++ + D +L EL EE+ Sbjct: 6 ERIAELELMITDPTFWEDQEQAQKTMQELTGLKDKVKSFFDLYQKWEDLGVLRELGAEEE 65 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D ILQE + +Q I+ E++ + LL+G D N+A + +HAGAGGTE+ DW ML+RM Sbjct: 66 DPDILQEIEEGIQTIQSELDRWHLQLLLNGPYDRNNALVTLHAGAGGTEAMDWNEMLMRM 125 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RW EK+ +K + L+ G+EAG+KSATL G NAYG+LKGE GVHRLVRISP+D++ Sbjct: 126 YIRWGEKKGYKVDILDSLAGDEAGMKSATLSFSGENAYGYLKGEMGVHRLVRISPFDASG 185 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ V P V D I+I+I+ D ++DT+RASGAGGQHVN T+SAVRITHIPTG+V Sbjct: 186 RRHTSFASVEVLPEVSDDIDIQINSEDLKVDTFRASGAGGQHVNKTESAVRITHIPTGIV 245 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V CQ ERSQ +N+A A ML+AKL+E + Q++ + N + + +I +G QIRSYV PY Sbjct: 246 VACQSERSQIQNRATAMRMLQAKLFERQRQEQADEVNRLKGDQQDIAFGSQIRSYVFHPY 305 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +VKD RTN E + +V+DG++DDF+ A + Sbjct: 306 NLVKDHRTNCEVGAVYNVMDGEIDDFVSAYM 336 >gi|229829544|ref|ZP_04455613.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM 14600] gi|229791533|gb|EEP27647.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM 14600] Length = 379 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 160/338 (47%), Positives = 232/338 (68%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D ++ Q++ LN + E P W + + M+E + L + + ++++ + + +L+ Sbjct: 26 LDLESKHQKIEELNREMEAPDFWNDADLSARKMKELKSLKDDVEIADKLKNSIEEIGMLM 85 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++A EEDD ++ E + ++K + E + ++LLSGE D+N+A + +HAGAGGTE+ DW Sbjct: 86 DMANEEDDADMVGEIRLMMDQMKEDFERVRIKTLLSGEFDANNAIVTLHAGAGGTEACDW 145 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ML RMYTRWA + F+ E L+ DG+EAGIK+ T + G NAYG+LK E+GVHRLVRI Sbjct: 146 TAMLYRMYTRWAAAQGFEVEELDYLDGDEAGIKAVTFQVNGENAYGYLKSEKGVHRLVRI 205 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+++N +R TSFSS V P ++ +++E+ + D RIDTYR+SGAGGQH+N T SA+RIT Sbjct: 206 SPFNANGKRQTSFSSCDVMPELEQDLDVEVKDEDIRIDTYRSSGAGGQHINKTSSAIRIT 265 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ ERSQH NK +A ML+AKLY L++++++ A T+I WG QIR Sbjct: 266 HFPTGIVVQCQNERSQHMNKDKAMQMLKAKLYMLKMEEQKAKAEGIRGEVTDIAWGNQIR 325 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV QPY MVKDLRT E + S V+DGD++ F+ A L Sbjct: 326 SYVFQPYTMVKDLRTGEETGNVSAVMDGDINLFINAYL 363 >gi|149194096|ref|ZP_01871194.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2] gi|149136049|gb|EDM24527.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2] Length = 364 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 175/349 (50%), Positives = 236/349 (67%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L + + D +RL + DP+ W + + + +E+ + + K+ Sbjct: 13 LENKLKNIESILKPDELQKRLDEITQMENDPNFWNDPKNSAKIQKEKNAILRKLEKYKKA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L DN + ELA E+D L E ++++ ++ + + E +LSGE D +A + +H Sbjct: 73 KNSLQDNKDMYELATMEEDEETLNEVFNDVKELEKIIRDLEIEVMLSGENDDKNAIITIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+AE+R +K + L+ G+EAGIK AT+L+KG NAYG+LK Sbjct: 133 PGAGGTESHDWASMLYRMYLRYAERRGWKVDILDYQAGDEAGIKDATILVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR+SP+DS RRHTSF+S+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRVSPFDSGGRRHTSFASVQVSPEIDDDIEIEIDEKDIRIDVYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+VV CQQ+RSQHKNK A+ ML++KLYELEL+KR+ A Sbjct: 253 VNKTESAVRITHIPTGIVVSCQQDRSQHKNKEMAFKMLKSKLYELELEKRK--AEEEGKP 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K E+GWG QIRSYVL PYQ VKD R+N + D+LDGDLD+ ++ L Sbjct: 311 KDEMGWGHQIRSYVLFPYQQVKDNRSNKAYSKVDDILDGDLDEIIEDVL 359 >gi|319650621|ref|ZP_08004761.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2] gi|317397802|gb|EFV78500.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2] Length = 331 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/323 (52%), Positives = 220/323 (68%), Gaps = 2/323 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A++++ E L + ++ + + + EL EE D + + + L Sbjct: 4 PGFWDDQQAAQVVISESNSLKEQVVEFHDLYETFENLELTYELVKEESDAELQADLEEEL 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + + + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ FK Sbjct: 64 KDLVKRLNDFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 124 ETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +D IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ KN Sbjct: 184 PEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQIKN 243 Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 + +A ML+AKLY+ +++++E E+A I + +IGWG QIRSYV PY MVKD RTN E Sbjct: 244 RERAMKMLQAKLYQKKIEEQEAELAEI-RGEQKDIGWGSQIRSYVFHPYSMVKDHRTNTE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGDLD F+ A L K Sbjct: 303 VGNVQGVMDGDLDMFINAYLRSK 325 >gi|291486081|dbj|BAI87156.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto BEST195] Length = 327 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 167/323 (51%), Positives = 218/323 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 3 DPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELEKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R FK Sbjct: 63 LKSLTKDFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K Sbjct: 183 MPEFNDEIDIDIRAEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGD+D F+ A L K Sbjct: 303 MGNVQAVMDGDIDTFIDAYLRSK 325 >gi|254447294|ref|ZP_05060761.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015] gi|198263433|gb|EDY87711.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015] Length = 300 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 160/293 (54%), Positives = 210/293 (71%), Gaps = 1/293 (0%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + I L D L+E+A EE D L D++ + VE +F + SGE D +AY Sbjct: 5 LDRITSGLGDAGDLIEMAKEEGDEETLAAVEDDIAELTDAVENLEFRRMFSGEMDEKNAY 64 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L++ AG+GGTE+QDWANMLLRMY RW ++ FK E +E+ +G+ AGIKSAT+ I+G A+ Sbjct: 65 LDIQAGSGGTEAQDWANMLLRMYLRWCDQHGFKNEIVELSEGDVAGIKSATIHIQGDYAF 124 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 GWL+ E GVHRLVR SP+DS RRHTSF+S+++ P VDDS +I+I+ +D R+DTYR+SGA Sbjct: 125 GWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFDIDINPADLRVDTYRSSGA 184 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAVRITH P+GVVV CQ +RSQH N+ A L+AKL+ELE+QKR + Sbjct: 185 GGQHVNTTDSAVRITHAPSGVVVSCQNQRSQHANRDFAMKQLKAKLWELEMQKRNAVKQE 244 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E +K +IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 245 AEDNKADIGWGSQIRSYVLDASR-IKDLRTGVETGNTQAVLDGSLDPFIEASL 296 >gi|89257152|ref|YP_514514.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica LVS] gi|115315491|ref|YP_764214.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica OSU18] gi|156503377|ref|YP_001429442.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica FTNF002-00] gi|254368376|ref|ZP_04984394.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica 257] gi|254368387|ref|ZP_04984404.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica FSC022] gi|89144983|emb|CAJ80343.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica LVS] gi|115130390|gb|ABI83577.1| peptide chain release factor B [Francisella tularensis subsp. holarctica OSU18] gi|134254184|gb|EBA53278.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica 257] gi|156253980|gb|ABU62486.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121281|gb|EDO65482.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica FSC022] Length = 325 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 170/321 (52%), Positives = 228/321 (71%), Gaps = 3/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L +++ L+N + + I + L LLEL E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D+N A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQNVASEIEKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T+ VLDGDLD F++A+L Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321 >gi|328676241|gb|AEB27111.1| Peptide chain release factor 2 [Francisella cf. novicida Fx1] Length = 325 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 171/321 (53%), Positives = 229/321 (71%), Gaps = 3/321 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L +++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELAEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K + DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + +KDLRT + Sbjct: 242 KNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGV 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T+ VLDGDLD F++A+L Sbjct: 301 ENTNTQAVLDGDLDKFIEASL 321 >gi|254831068|ref|ZP_05235723.1| peptide chain release factor 2 [Listeria monocytogenes 10403S] Length = 327 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 168/320 (52%), Positives = 215/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP+ W + A+ ++ E +++ I LEL EE D + +E + Sbjct: 3 DPNFWNDQQAAQKVINESNVYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK Sbjct: 63 IKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K Sbjct: 183 MPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLDDF+ A L Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322 >gi|303241850|ref|ZP_07328345.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2] gi|302590625|gb|EFL60378.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2] Length = 340 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 162/329 (49%), Positives = 223/329 (67%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K +P W ++ ++ ++++ + + + + D L EL LEEDD S+ Sbjct: 8 LEQKASEPDFWNDIENSQKVLQKIKTMKEKLERYNRLTQEWEDAKTLCELGLEEDDESVF 67 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E D+ ++ K + E + E+LL G D N+A L +HAGAGGTE+QDW MLLRM+TRW Sbjct: 68 TEVEDSFKKFKKDFEELRLETLLIGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFTRWG 127 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + F L+ DGEEAGIKS T+ + G NAYG+LK E+GVHRLVRISP+D++ RRHTS Sbjct: 128 ESKGFTVRILDYLDGEEAGIKSVTINVIGENAYGYLKSEKGVHRLVRISPFDASGRRHTS 187 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S V P + D +E+ I+ D RIDTYRASGAGGQH+N T+SA+RITHIPTGVVV CQ Sbjct: 188 FASCDVMPELSDDVEVNINPDDLRIDTYRASGAGGQHINKTESAIRITHIPTGVVVACQT 247 Query: 266 ERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ +NK A ML++KL E+ E +++E+I ++ + + +I WG QIRSYV PY +VK Sbjct: 248 ERSQFQNKDTAMRMLKSKLLEIKEREQKEKIEDL-KGIQMDIAWGSQIRSYVFCPYTLVK 306 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 D RTN E+ + +V+DGDLD F+ + L Sbjct: 307 DHRTNYEQINVDNVMDGDLDGFINSYLVF 335 >gi|302390246|ref|YP_003826067.1| bacterial peptide chain release factor 2 (bRF-2) [Thermosediminibacter oceani DSM 16646] gi|302200874|gb|ADL08444.1| bacterial peptide chain release factor 2 (bRF-2) [Thermosediminibacter oceani DSM 16646] Length = 365 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 162/326 (49%), Positives = 223/326 (68%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L KT P+ W + A+ +++ L + + I+ + D + L+EL +E+ D + Sbjct: 35 LEEKTLTPNFWDDAQAAQKILQTLNQLKETVEKFEAIKKKWEDLMTLIELGIEDHDEGLY 94 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E S + K E E + ++LL G D N+A L +HAGAGGTE+QDW MLLRMYTRWA Sbjct: 95 GEISAEAEEFKKEFEEMRLKTLLRGRYDKNNAILSLHAGAGGTEAQDWVQMLLRMYTRWA 154 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + +K + L++ GEEAGIKSAT+L++GP AYG+LK EQGVHRLVRISP+D+ RRHTS Sbjct: 155 EDKGYKVKVLDMLPGEEAGIKSATILVEGPYAYGYLKSEQGVHRLVRISPFDAAGRRHTS 214 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P ++D IE+EI D +I+T+R+ GAGGQ+VN T+SAVRITHIPTG+VV CQ Sbjct: 215 FASVDVIPEIEDDIEVEIKPEDLKIETFRSGGAGGQYVNKTESAVRITHIPTGIVVTCQN 274 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ N+ A +LRAKL+ L L+++++ N + EI WG QIRSYV PY +VKD Sbjct: 275 ERSQQSNRNTAMKLLRAKLFNLYLEEQQKKINELRGEQKEIAWGNQIRSYVFHPYSLVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RTN+E + V+DG++D F+ A L Sbjct: 335 HRTNVEVGNVQAVMDGEIDMFINAYL 360 >gi|323703031|ref|ZP_08114687.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM 574] gi|323532044|gb|EGB21927.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM 574] Length = 326 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 160/321 (49%), Positives = 215/321 (66%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W N ++ + ++ L + + ++ D ++LEL EE+D + E +L Sbjct: 6 FWDNTEHSQQVTQKLALLKDKVEAFNSLESAYQDLEVMLELCNEEEDPLLDDELKSDLAS 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + V + E +LSG D NDA L +HAGAGGTESQDW MLLRM+TR+ E +K E Sbjct: 66 LTKRVADMELEVMLSGPYDRNDAILSLHAGAGGTESQDWVQMLLRMFTRYCENHNYKVEV 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L++ G+EAG+KSAT+ + GPNAYG+LK E+GVHRLVRISP+D+ RRHTSF+S+ V PV Sbjct: 126 LDLLPGDEAGVKSATIQVSGPNAYGYLKSEKGVHRLVRISPFDAAGRRHTSFASVDVLPV 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD +E+ I D +IDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ N+A Sbjct: 186 VDDEVEVNIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQTYNRA 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A +L+AKL +LEL+K+EE + +I WG QIRSYV PY +VKD RT +E + Sbjct: 246 AAMKLLKAKLIDLELRKKEEELAALRGDQKDIAWGSQIRSYVFHPYSLVKDHRTGVEVGN 305 Query: 335 PSDVLDGDLDDFMKATLAIKK 355 V+DG +D+F+ A L K+ Sbjct: 306 VYAVMDGAIDEFIAAYLKQKR 326 >gi|224503251|ref|ZP_03671558.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-561] Length = 338 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 169/330 (51%), Positives = 219/330 (66%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R++ L + DP+ W + A+ ++ E +++ I LEL EE D Sbjct: 4 RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY Sbjct: 64 EDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV Sbjct: 184 RHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E + V+DGDLDDF+ A L Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYL 333 >gi|161615988|ref|YP_001589953.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|213425820|ref|ZP_03358570.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213646961|ref|ZP_03377014.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238909840|ref|ZP_04653677.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289823819|ref|ZP_06543431.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|16421591|gb|AAL21916.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161365352|gb|ABX69120.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|261248173|emb|CBG26009.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301159597|emb|CBW19116.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914062|dbj|BAJ38036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087470|emb|CBY97235.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225716|gb|EFX50770.1| Peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613439|gb|EFY10380.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621031|gb|EFY17889.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624095|gb|EFY20929.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628166|gb|EFY24955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633285|gb|EFY30027.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636137|gb|EFY32845.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639476|gb|EFY36164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647592|gb|EFY44081.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648776|gb|EFY45223.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653831|gb|EFY50157.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657937|gb|EFY54205.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664040|gb|EFY60239.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668949|gb|EFY65100.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673057|gb|EFY69164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677952|gb|EFY74015.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681128|gb|EFY77161.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687942|gb|EFY83909.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194862|gb|EFZ80049.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196613|gb|EFZ81761.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202687|gb|EFZ87727.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207826|gb|EFZ92772.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212622|gb|EFZ97439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214895|gb|EFZ99643.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222626|gb|EGA06991.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225095|gb|EGA09347.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230617|gb|EGA14735.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235032|gb|EGA19118.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239071|gb|EGA23121.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244571|gb|EGA28577.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247186|gb|EGA31152.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253331|gb|EGA37160.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256362|gb|EGA40098.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262462|gb|EGA46018.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267442|gb|EGA50926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269154|gb|EGA52609.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624786|gb|EGE31131.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332989908|gb|AEF08891.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 293 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 168/280 (60%), Positives = 207/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|47096102|ref|ZP_00233703.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a F6854] gi|258611482|ref|ZP_05232771.2| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165] gi|258612274|ref|ZP_05269486.2| peptide chain release factor 2 [Listeria monocytogenes F6900] gi|293596674|ref|ZP_05263420.2| peptide chain release factor 2 [Listeria monocytogenes J2818] gi|47015563|gb|EAL06495.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a F6854] gi|258600468|gb|EEW13793.1| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165] gi|258610392|gb|EEW23000.1| peptide chain release factor 2 [Listeria monocytogenes F6900] gi|293591414|gb|EFF99748.1| peptide chain release factor 2 [Listeria monocytogenes J2818] Length = 338 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 169/330 (51%), Positives = 219/330 (66%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R++ L + DP+ W + A+ ++ E +++ I LEL EE D Sbjct: 4 RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY Sbjct: 64 EDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV Sbjct: 184 RHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E + V+DGDLDDF+ A L Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYL 333 >gi|289435770|ref|YP_003465642.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172014|emb|CBH28560.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 327 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 168/320 (52%), Positives = 214/320 (66%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP+ W + A+ ++ E +++ I LEL EE D + +E + Sbjct: 3 DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK Sbjct: 63 ITAYMATINAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K Sbjct: 183 MPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLDDF+ A L Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322 >gi|254796954|ref|YP_003081791.1| peptide chain release factor 2 [Neorickettsia risticii str. Illinois] gi|254590201|gb|ACT69563.1| peptide chain release factor 2 [Neorickettsia risticii str. Illinois] Length = 334 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 167/324 (51%), Positives = 234/324 (72%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + P LW++ A++L++E+ ++ ++ +E+ +L D ++ELA ++ + +++ Sbjct: 8 VDSPRLWEDQSRAQLLLKEKSQIETSLKEFRELSIQLDDLTEMIELASKDGEEGAMKDLE 67 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KR 148 L +K +++ K+ E L SGEAD ND LE+ +GAGGTES DWA MLLRMYTRWAE Sbjct: 68 RELLLLKEKIQKKEIECLFSGEADGNDCLLEIQSGAGGTESNDWAMMLLRMYTRWAEIYH 127 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 KF+ + ++ +GEE GIKS TL + G NAYGW + E GVHRLVRISP+D+N++RHTSF+ Sbjct: 128 KFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWARTETGVHRLVRISPFDANAKRHTSFAK 187 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++V P ++ I I I E D +IDTYRASGAGGQHVN T+SAVRITH+P+ +VVQ Q RS Sbjct: 188 VFVSPCMEGEINISIDEKDLKIDTYRASGAGGQHVNKTESAVRITHLPSKIVVQSQSSRS 247 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+NKA+A ML+++LYE+EL+K+EE N + + IGWG QIRSYVL PYQM+KDLRT Sbjct: 248 QHQNKAEAIQMLKSRLYEIELRKKEEKVNAARNVEDSIGWGYQIRSYVLHPYQMIKDLRT 307 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 E + + VLDGDLD F+ AT++ Sbjct: 308 GHEVGNITSVLDGDLDSFIIATIS 331 >gi|267847202|gb|ACJ79637.2| peptide chain release factor 2, programmed frameshift [Bacillus cereus AH187] Length = 380 Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 171/350 (48%), Positives = 227/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLYLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIEI D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376 >gi|268611479|ref|ZP_06145206.1| hypothetical protein RflaF_18501 [Ruminococcus flavefaciens FD-1] Length = 372 Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 160/351 (45%), Positives = 238/351 (67%), Gaps = 8/351 (2%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 +++ L + + +NA +R++ L +T W ++ ++ +++E++ L+ I ++ D Sbjct: 16 KEMEELADVLNIENAKKRVAELGDETAKEGFWDDLENSQKVLKEQKSLERKIEKFNKLND 75 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L D + L+EL++E +D S ++E + K ++E ++ +LL+GE D +A L HAG Sbjct: 76 SLEDLITLIELSIEAEDESDIEEIKAEAESFKSKLEDEKLSTLLTGEYDGANAILTFHAG 135 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDWA ML RMY RWAE+ +FK E L+ DG+EAG+KSA++LI+G NAYG++K E Sbjct: 136 AGGTEAQDWAEMLYRMYNRWAERHEFKVELLDYLDGDEAGMKSASILIEGENAYGYMKSE 195 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR+SP+D+ RRHTSF+++ V P +DDSIE++I D ++ YR+SGAGGQ VN Sbjct: 196 SGVHRLVRVSPFDAQGRRHTSFAALEVMPELDDSIEVDIRPEDIEMEVYRSSGAGGQKVN 255 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE----LQKREEIANIGE 300 T SAVR+ H PTG+VV CQ +RSQ++NK A MLR+KL E++ L+K E+I + Sbjct: 256 KTSSAVRLIHKPTGIVVSCQTQRSQYQNKDYAMKMLRSKLIEIKEREHLEKIEDIKGV-- 313 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +I WG QIRSYV PY +VKD RT E + V+DGD+D F+ A L Sbjct: 314 --QNQIAWGSQIRSYVFMPYTLVKDTRTGFENGNIQAVMDGDIDGFINAYL 362 >gi|293606108|ref|ZP_06688473.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC 43553] gi|292815563|gb|EFF74679.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC 43553] Length = 300 Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 157/286 (54%), Positives = 214/286 (74%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D L ELA +DD S L+ + + ++E +F + S AD + +L++ AGA Sbjct: 12 LADANELFELAKADDDDSTLESIEKDADAFQEKLENLEFRRMFSNPADPLNCFLDIQAGA 71 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLR Y R+AE++ FK E LE +G+ AGIKSAT+ ++G A+G+L+ E Sbjct: 72 GGTEAQDWASMLLRQYLRYAERKGFKVEVLEESEGDVAGIKSATIKMEGEYAFGYLRTET 131 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D R+DTYRASGAGGQH+N Sbjct: 132 GVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINK 191 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SKT+ Sbjct: 192 TDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTD 251 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 252 VGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 296 >gi|217962667|ref|YP_002341241.1| peptide chain release factor 2 [Bacillus cereus AH187] Length = 380 Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 171/350 (48%), Positives = 227/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIEI D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376 >gi|283777745|ref|ZP_06344221.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus NVH0597-99] gi|283645392|gb|EFC27417.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus NVH0597-99] Length = 380 Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 171/350 (48%), Positives = 227/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIEI D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376 >gi|312792717|ref|YP_004025640.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179857|gb|ADQ40027.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 372 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 169/338 (50%), Positives = 230/338 (68%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D L L +T P WQ++ ++ ++++ + L + I +++ + D +L Sbjct: 25 LDIDRLESELKSLENETSSPDFWQDLENSQKVLQKIKRLKDKIERFQKLYSQWEDLKVLT 84 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL+L+E + + +E L ++ ++E + E LL+G D N+A L +HAGAGGTE+QDW Sbjct: 85 ELSLDEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHAGAGGTEAQDW 144 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRI Sbjct: 145 AEMLLRMYTRWAVKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRI 204 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHVN T+SAVRI Sbjct: 205 SPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIK 264 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + +TEIGWG QIR Sbjct: 265 HIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIR 324 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 325 SYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYL 362 >gi|62181551|ref|YP_217968.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|205353965|ref|YP_002227766.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858304|ref|YP_002244955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584830|ref|YP_002638628.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62129184|gb|AAX66887.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|205273746|emb|CAR38741.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710107|emb|CAR34462.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469357|gb|ACN47187.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716032|gb|EFZ07603.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326629079|gb|EGE35422.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 293 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 168/280 (60%), Positives = 207/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLLRMYLRWAEARGFKTEIIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|296387792|ref|ZP_06877267.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa PAb1] Length = 248 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 156/245 (63%), Positives = 194/245 (79%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RWA+K F +E+ +GE AGIK Sbjct: 1 MFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ + Sbjct: 61 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYE Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QKR + E SK++IGWG QIRSYVL + +KDLRT IE++ VLDGDLD++ Sbjct: 181 LEMQKRTAASQALEDSKSDIGWGHQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLDEY 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 LEASL 244 >gi|16801714|ref|NP_471982.1| peptide chain release factor 2 [Listeria innocua Clip11262] gi|16415189|emb|CAC97879.1| prfB [Listeria innocua Clip11262] Length = 327 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 168/320 (52%), Positives = 214/320 (66%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP+ W + A+ ++ E +++ I LEL EE D + E + Sbjct: 3 DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELEKD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK Sbjct: 63 IKAYVATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K Sbjct: 183 MPELDDEIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLDDF+ A L Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322 >gi|299535985|ref|ZP_07049304.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1] gi|298728590|gb|EFI69146.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1] Length = 328 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 173/323 (53%), Positives = 222/323 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + A++++ E L ++ K++ + + + LEL EE D + +E Sbjct: 4 EPGFWDDQQGAQVIINEGNGLKAIVNEYKDLVETHENLDMTLELLREEPDEELQEELGKE 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + ++ + + LLSG D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK Sbjct: 64 LAEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TL IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 124 VETVDYLPGDEAGIKSVTLSIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVSCDV 183 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P DD+IEI+I D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG +VQCQ ERSQ K Sbjct: 184 MPEFDDNIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTIVQCQAERSQIK 243 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+ KLY+LEL K++ + + EIGWG QIRSYV PY MVKD RTN E Sbjct: 244 NREKAMTMLKGKLYQLELDKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEE 303 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGDLD F+ A L K Sbjct: 304 TGNVGAVMDGDLDPFINAYLRSK 326 >gi|307718929|ref|YP_003874461.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192] gi|306532654|gb|ADN02188.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192] Length = 361 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 171/353 (48%), Positives = 234/353 (66%), Gaps = 9/353 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK----MLMRERQHLDNAISF 58 + R+ GG+F+ + +++S L +T P LW + A+ L R + + S Sbjct: 1 MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++E++D L +LA EE+D S +E L + + + LL+ E D DAY Sbjct: 61 VQEVEDIHT----LYDLAAEENDPSQEEELRQQLAEAERKFRELRLRELLNEEYDQKDAY 116 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L +HAGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG A+ Sbjct: 117 LTIHAGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKGDYAF 175 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+LKGE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I D RIDTYR+ GA Sbjct: 176 GYLKGEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGA 235 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SAVRITH+PTG+VVQCQ ERSQHKN+ A MLR++LYE Q REE Sbjct: 236 GGQHVNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEK 295 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV QPY MVKDLRT +E + V+DGDLD F++A L Sbjct: 296 KAIEKKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYL 348 >gi|302755404|ref|XP_002961126.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii] gi|300172065|gb|EFJ38665.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii] Length = 427 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 168/346 (48%), Positives = 226/346 (65%), Gaps = 1/346 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++R + + W + + +L L + E P LW + A RE L + + I+E+ Sbjct: 72 VARSMQLVKTRMKWGDVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREM 131 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +N+ L+ELA EE D + E L ++ + K+ +LL E D +LEV Sbjct: 132 ESELVENVDLVELAREEKDEQVEAEAVSALATLRKAAKDKELLALLCEENDGCPCFLEVQ 191 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ES D+A MLLRMY WA +R F+ ++ G+ AGIK ATL ++G AYG+ K Sbjct: 192 AGAGGAESMDFAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAK 251 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+D RRHTSF+++ V P++D++ EIEI+E+D ID +R+SGAGGQ Sbjct: 252 TEAGVHRLVRISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQ 311 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSA+RI H PTG+ VQCQ ERSQHKNK A +LR++LY+LEL+++ E Sbjct: 312 HVNTTDSAIRIVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQ 371 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 S EI WG QIRSYVLQPYQ+VKDLRT E T+P+ VLDG LD F+ Sbjct: 372 SLHEISWGNQIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFI 417 >gi|218900306|ref|YP_002448717.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus G9842] gi|218544557|gb|ACK96951.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus G9842] Length = 380 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 169/350 (48%), Positives = 227/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMSAGFWDDQQGAQAVINEANALKDMVGSFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + + EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEVTHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376 >gi|146328937|ref|YP_001209831.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A] gi|146232407|gb|ABQ13385.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A] Length = 305 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 163/293 (55%), Positives = 211/293 (72%), Gaps = 1/293 (0%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + I L D L+ LA +E+D ++Q +++R++ VE +F + SGE D+N+A+ Sbjct: 8 LDNIHQGLNDARELMALAEDENDEELVQSARLDIERLQKSVEILEFRRMFSGELDANNAF 67 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L++ +G+GGTE+QDWA ML RMY RW E + F TE LE G+ AGIKSAT+ G AY Sbjct: 68 LDIQSGSGGTEAQDWAEMLERMYLRWGEAKGFTTELLEETPGDVAGIKSATIRFTGEYAY 127 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 GWLK E GVHRLVR SP+D+N+RRHTSF++++V P +DD+IEI+I+ +D RID YRASGA Sbjct: 128 GWLKTEIGVHRLVRKSPFDANNRRHTSFAAVFVSPEIDDAIEIDINPADLRIDVYRASGA 187 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SAVRITH+PTG VVQ Q RSQH+NK LRAKLY+LEL KR E A Sbjct: 188 GGQHVNRTESAVRITHLPTGTVVQSQDSRSQHQNKQTCMRHLRAKLYQLELHKRSESAQA 247 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E SK++IGWG QIRSYVL Q +KDLRT E ++ VLDGDLD F++ +L Sbjct: 248 LEDSKSDIGWGNQIRSYVLDQ-QRIKDLRTGYETSNTQAVLDGDLDPFIQESL 299 >gi|302875854|ref|YP_003844487.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] gi|302578711|gb|ADL52723.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] Length = 369 Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 164/351 (46%), Positives = 232/351 (66%), Gaps = 2/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS+ + +G L D L L ++ W N+ A+ + + + + I Sbjct: 13 ELSKTIEEMGALLDIPKLTLTLEELEGSMQESGFWDNLERAQSVTARAKGIKDRIDLYNN 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 Q + D +L+E+A+EE+D S++ E + + + VE + E +LSGE D+N+A + + Sbjct: 73 FQSSVEDIKVLIEMAIEENDSSLVTEVYNEISTLSDSVENLRLELMLSGEYDTNNAIVTL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+G GGT++ DW MLLRMYTRW EK+ F E L++ G+EAGIKSATL + G AYG+L Sbjct: 133 HSGVGGTDAMDWTEMLLRMYTRWCEKKAFNVETLDLQVGDEAGIKSATLKVTGLYAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +EI+ SD ++DTYRASGAGGQ Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASLEVTPELRQDQNVEINPSDLKVDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGE 300 HVN T+SA+RITHIPTG+VVQCQ ERSQ +N+ A NML++KL EL E +E+I ++ Sbjct: 253 HVNKTESAIRITHIPTGIVVQCQNERSQIQNRETALNMLKSKLVELKERAHKEKIEDLTG 312 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K ++GWG QIRSYV PY MVKD RTNI+ V+DG+LD F+K L Sbjct: 313 DLK-DMGWGSQIRSYVFHPYTMVKDHRTNIQVNDVYKVMDGELDVFIKGYL 362 >gi|315641246|ref|ZP_07896323.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952] gi|315483013|gb|EFU73532.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952] Length = 340 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 172/327 (52%), Positives = 222/327 (67%) Query: 28 TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE 87 + +P W + A+ ++ E A E+ D L + +LLE+ EE D + QE Sbjct: 10 NRMAEPGFWDDTQSAQKVINENNSNKEAFDQFHELADELEELEVLLEMIQEEPDDEMEQE 69 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + + ++ + LL G D N+A +E+H GAGGTESQDW +MLLRMY RWA+K Sbjct: 70 LATRASELLGKMSAYELAMLLDGPYDHNNAIIELHPGAGGTESQDWGSMLLRMYQRWADK 129 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R F+ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS +RRHTSF Sbjct: 130 RGFQVETLDYLPGDEAGIKSVTLLIKGRNAFGYLKSEKGVHRLVRISPFDSANRRHTSFC 189 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S+ V P +DD+I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +R Sbjct: 190 SVDVMPELDDTIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 249 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD R Sbjct: 250 SQLKNREQAMGMLKAKLYQLEVEKQEQEAAALRGEQMEIGWGSQIRSYVFHPYSMVKDHR 309 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E + V+DGD+D F+ A L K Sbjct: 310 TNFETGNVQAVMDGDIDGFIDAYLKQK 336 >gi|302766928|ref|XP_002966884.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii] gi|300164875|gb|EFJ31483.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii] Length = 427 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 168/346 (48%), Positives = 226/346 (65%), Gaps = 1/346 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++R + + W + + +L L + E P LW + A RE L + + I+E+ Sbjct: 72 VARSMQLVKTRMKWGDVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREM 131 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +N+ L+ELA EE D + E L ++ + K+ +LL E D +LEV Sbjct: 132 ESELVENVDLVELAREEKDEQVEAEAVSALATLRKAAKDKELLALLCEENDGCPCFLEVQ 191 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ES D+A MLLRMY WA +R F+ ++ G+ AGIK ATL ++G AYG+ K Sbjct: 192 AGAGGAESMDFAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAK 251 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+D RRHTSF+++ V P++D++ EIEI+E+D ID +R+SGAGGQ Sbjct: 252 TEAGVHRLVRISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQ 311 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSA+RI H PTG+ VQCQ ERSQHKNK A +LR++LY+LEL+++ E Sbjct: 312 HVNTTDSAIRIVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQ 371 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 S EI WG QIRSYVLQPYQ+VKDLRT E T+P+ VLDG LD F+ Sbjct: 372 SLHEISWGNQIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFI 417 >gi|262395207|ref|YP_003287061.1| peptide chain release factor 2 [Vibrio sp. Ex25] gi|262338801|gb|ACY52596.1| peptide chain release factor 2 [Vibrio sp. Ex25] Length = 260 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 155/254 (61%), Positives = 197/254 (77%), Gaps = 1/254 (0%) Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 ++E +F + SG+ DS+D Y+++ AG+GGTE+QDW NMLLRMY RWAE + FK E +E+ Sbjct: 4 KLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEV 63 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 +GE AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP +D+ Sbjct: 64 SEGEVAGLKSATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDE 123 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA Sbjct: 124 NIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAM 183 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LRAKL+ELELQK+ E +K++IGWG QIRSYVL + +KDLRT IE + Sbjct: 184 KQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQA 242 Query: 338 VLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 243 VLDGDLDKFIEASL 256 >gi|254521932|ref|ZP_05133987.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14] gi|219719523|gb|EED38048.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14] Length = 308 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 162/293 (55%), Positives = 213/293 (72%), Gaps = 1/293 (0%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 I + D L D LLELA E D +L + + VE +F+ + SGE D+ A+ Sbjct: 4 IASVLDGLTDATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAF 63 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ AGAGGTE+QDWA +LLRMY RW E R +KTE +E+ G+ AGIKSATL ++G AY Sbjct: 64 VDIQAGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAY 123 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 GWLK E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGA Sbjct: 124 GWLKTETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGA 183 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SAVRITHIPT +VV CQ RSQH+N+ A ML AKLYELE+QKR + Sbjct: 184 GGQHVNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDA 243 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E++K++IGWG QIR+YVL + +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 244 VEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 295 >gi|47093711|ref|ZP_00231463.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b H7858] gi|254992782|ref|ZP_05274972.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-064] gi|47017905|gb|EAL08686.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b H7858] gi|328465115|gb|EGF36383.1| peptide chain release factor 2 [Listeria monocytogenes 1816] Length = 327 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 167/320 (52%), Positives = 215/320 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP+ W + A+ ++ E +++ I LEL EE D + +E + Sbjct: 3 DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK Sbjct: 63 IKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K Sbjct: 183 MPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD+F+ A L Sbjct: 303 TGNIQAVMDGDLDEFINAYL 322 >gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833] gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833] Length = 378 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 167/351 (47%), Positives = 232/351 (66%), Gaps = 3/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ L + + D D ++++ L + P LW + +A+ + HL ++ I+E Sbjct: 12 ELTGTLRGIQDVLDIDGLRKQIAELEEQAAAPDLWNDPEKAQRVTSRLSHLQGEVNRIEE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + RL D +L ELA EE D L E L ++K ++ + +LLSGE D +A + + Sbjct: 72 LARRLEDLPVLFELAAEEGDQEALAEAERELAKLKSDIGALEVRTLLSGEYDEREALITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +A AGG ++ DWA MLLRMY RWAE++ + TE + EEAGIKS T +K P AYG L Sbjct: 132 NAQAGGVDAADWAQMLLRMYLRWAERKGYPTEIYDTSYAEEAGIKSVTFTVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G HRLVRISP+D+ +RR TSF+ + V PVV+ + +IEI+E + RID YR+SG GGQ Sbjct: 192 KGEHGTHRLVRISPFDNQARRQTSFAGVDVMPVVEQTDDIEINEDEIRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300 VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A +L+AKL LE +++EE + E Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMAVLKAKL--LERKRQEEAQAMAEL 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +T WG QIR+YVL PYQ+VKDLRT +E +P+ VLDGDLD F++A + Sbjct: 310 RGETTTSWGTQIRNYVLHPYQIVKDLRTGVESGNPTAVLDGDLDQFIEAEI 360 >gi|116873873|ref|YP_850654.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742751|emb|CAK21875.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str. SLCC5334] Length = 327 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 168/320 (52%), Positives = 213/320 (66%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP+ W + A+ ++ E +++ I LEL EE D + E + Sbjct: 3 DPNFWNDQQAAQKIINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELEKD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK Sbjct: 63 ITAYMATINEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K Sbjct: 183 MPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLDDF+ A L Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322 >gi|218906362|ref|YP_002454196.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus AH820] gi|218540032|gb|ACK92430.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus AH820] Length = 380 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 170/350 (48%), Positives = 227/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376 >gi|169826759|ref|YP_001696917.1| peptide chain release factor 2 [Lysinibacillus sphaericus C3-41] gi|168991247|gb|ACA38787.1| Peptide chain release factor 2 (RF-2) [Lysinibacillus sphaericus C3-41] Length = 328 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 172/323 (53%), Positives = 224/323 (69%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + A++++ E L ++ KE+++ + + LEL EE D + +E Sbjct: 4 EPGFWDDQQGAQVIINEGNGLKAIVNEYKELEETHENLDMTLELLREEPDEELQEELGKE 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + ++ + + LLSG D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK Sbjct: 64 LVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 124 VETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVSCDV 183 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P D++IEI+I D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERSQ K Sbjct: 184 MPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERSQIK 243 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+ KLY+LEL+K++ + + +IGWG QIRSYV PY MVKD RTN E Sbjct: 244 NREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTNEE 303 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGDLD F+ A L K Sbjct: 304 TGNVGAVMDGDLDPFINAYLRSK 326 >gi|261867765|ref|YP_003255687.1| peptide chain release factor 2 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413097|gb|ACX82468.1| peptide chain release factor 2 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 300 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 168/296 (56%), Positives = 218/296 (73%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 ++ IK ++ L D LLELA+E D E L ++ ++E +F + SGE D+ Sbjct: 2 VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAITELNALEQQLEKLEFRRMFSGEHDAC 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G Sbjct: 62 DCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRA Sbjct: 122 YAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ Sbjct: 182 SGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E +K++IGWG QIRSYVL + +KDLRT IE + VLDGDLD F++A+L Sbjct: 242 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDRFIEASL 296 >gi|308175261|ref|YP_003921966.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7] gi|307608125|emb|CBI44496.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7] gi|328555234|gb|AEB25726.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208] gi|328913595|gb|AEB65191.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3] Length = 327 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 168/323 (52%), Positives = 219/323 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + +A+ ++ E L + ++ ++ + + + EL EE D + QE Sbjct: 3 EPEFWNDQQKAQTVINEANGLKDYVNSYHQLSESHEELQMTYELLKEEPDQELQQELEKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R K Sbjct: 63 LKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRGCK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P ++ I+IEI D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K Sbjct: 183 MPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGD+D F+ A L K Sbjct: 303 MGNVQAVMDGDIDIFIDAYLRSK 325 >gi|160893549|ref|ZP_02074333.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50] gi|156864534|gb|EDO57965.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50] Length = 329 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 165/322 (51%), Positives = 226/322 (70%), Gaps = 2/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P W +V ++ + R+ + L +++ ++++ D L+++A EE D S+++E + Sbjct: 2 EQPGFWDDVAKSTSVSRQLKKLQDSLEEYQKLEQDFSDIETLIQMAEEEGDSSMIEEIGE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + E E + LLSGE D DA + +HAGAGGTES DW +ML RMYTRWAEK F Sbjct: 62 MLTAFQKEFENYRISLLLSGEFDGYDAVMTLHAGAGGTESCDWTSMLYRMYTRWAEKHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E L+ +G+EAGIKS T+ I G NAYG+LK E+GVHRLVRISP+++ +R TSF+S Sbjct: 122 KVEVLDYLEGDEAGIKSVTIQISGQNAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ +E++I+E D RIDTYR+SGAGGQH+N T SAVRITHIPTG+VVQCQ ERSQH Sbjct: 182 VIPEIEEDLEVDINEDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK +A ML++KLY ++ Q+ ++I++I E G+G QIRSYV+QPY MVKD RT Sbjct: 242 MNKDKAMQMLKSKLYLIKKQENLDKISDI-RGEILENGFGSQIRSYVMQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + + VLDG+LD FM A L Sbjct: 301 EESGNVAAVLDGELDGFMNAYL 322 >gi|262163922|ref|ZP_06031661.1| peptide chain release factor 2 [Vibrio mimicus VM223] gi|262172260|ref|ZP_06039938.1| peptide chain release factor 2 [Vibrio mimicus MB-451] gi|261893336|gb|EEY39322.1| peptide chain release factor 2 [Vibrio mimicus MB-451] gi|262027450|gb|EEY46116.1| peptide chain release factor 2 [Vibrio mimicus VM223] Length = 263 Score = 328 bits (842), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 155/260 (59%), Positives = 202/260 (77%), Gaps = 1/260 (0%) Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + +++++E +F + SG+ DS+D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FK Sbjct: 1 MDELEVKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFK 60 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 TE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++ Sbjct: 61 TEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFI 120 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHK Sbjct: 121 YPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHK 180 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK QA LRAKL+ELELQK+ E +K++IGWG QIRSYVL + +KDLRT IE Sbjct: 181 NKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIE 239 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + VLDGDLD F++A+L Sbjct: 240 NRNTQAVLDGDLDKFIEASL 259 >gi|242129269|gb|ACS83718.1| peptide chain release factor 2 [uncultured bacterium AOCefta2] Length = 367 Score = 328 bits (841), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 160/287 (55%), Positives = 206/287 (71%), Gaps = 4/287 (1%) Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D+L + E+ E D S+ E + + +F+S+LS D +D++L +H GAG Sbjct: 74 SDSLEMAEMLKAEGDESMAPELEKQAAELAQRLNDLEFKSMLSEAEDVSDSFLHIHPGAG 133 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWANMLLRMYTRWAE++ FK E +++ GE AGI TL ++G A+G+LK E G Sbjct: 134 GTESCDWANMLLRMYTRWAERKGFKVELIDLQPGEGAGISRVTLAVRGEYAFGYLKAESG 193 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+D+N RRHTSF+S+ Y V D IE+EI + D RIDTYR+SGAGGQHVN T Sbjct: 194 VHRLVRISPFDANKRRHTSFASVHAYAEVTDDIEVEILDKDLRIDTYRSSGAGGQHVNVT 253 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE--EIANIGESSKT 304 DSAVRITHIPT +VV CQ ERSQHKNKA A +LR++LY+L ++RE + A GE K Sbjct: 254 DSAVRITHIPTKIVVSCQNERSQHKNKATAMKVLRSRLYQLYKEQREADQAAKAGE--KK 311 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV QPYQMVKDLRT++E ++ V+DG +D F++A L Sbjct: 312 DISWGSQIRSYVFQPYQMVKDLRTDVETSNIGAVMDGAIDPFIEAFL 358 >gi|52082063|ref|YP_080854.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580] gi|52787452|ref|YP_093281.1| hypothetical protein BLi03772 [Bacillus licheniformis ATCC 14580] gi|319647929|ref|ZP_08002147.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2] gi|52005274|gb|AAU25216.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580] gi|52349954|gb|AAU42588.1| PrfB [Bacillus licheniformis ATCC 14580] gi|317390270|gb|EFV71079.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2] Length = 327 Score = 328 bits (841), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 165/323 (51%), Positives = 220/323 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ E L + ++ K + + + + +L E+ D + E + Sbjct: 3 DPDFWGDQQKAQTIINEANALKDYVNTYKSLSESHEELQMTHDLLKEDPDQDLQNELVNE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R FK Sbjct: 63 LKSLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P ++ I+IEI D ++DTYRASGAGGQHVNTTDSAVRITH+PTGV+V CQ ERSQ K Sbjct: 183 MPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIVTCQTERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML++KLY+ +++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 243 NRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGD+D F+ A L K Sbjct: 303 MGNVQAVMDGDIDSFIDAYLRSK 325 >gi|295401151|ref|ZP_06811124.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius C56-YS93] gi|294976744|gb|EFG52349.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius C56-YS93] Length = 327 Score = 328 bits (841), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 176/323 (54%), Positives = 227/323 (70%), Gaps = 2/323 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A+ ++ E L + + + +++R + + EL EE D + QE Sbjct: 4 PDFWDDQKAAQTVINEANALKDLVGEFQSLEERFENLEVTYELIKEEPDEDLQQELVTEA 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +R+ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ FK Sbjct: 64 KRLTKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S V Sbjct: 124 ETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVI 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD IEIEI + RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ KN Sbjct: 184 PEMDDDIEIEIRPEEIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIKN 243 Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 + +A NML+AKLY+ +L++++ E+A I + EIGWG QIRSYV PY +VKD RTN+E Sbjct: 244 REKALNMLKAKLYQKKLEEQQAELAEI-RGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L K Sbjct: 303 VGNVQAVMDGEIDIFIDAYLRSK 325 >gi|240143320|ref|ZP_04741921.1| peptide chain release factor 2 [Roseburia intestinalis L1-82] gi|257204691|gb|EEV02976.1| peptide chain release factor 2 [Roseburia intestinalis L1-82] gi|291536819|emb|CBL09931.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia intestinalis M50/1] gi|291539122|emb|CBL12233.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia intestinalis XB6B4] Length = 338 Score = 328 bits (841), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 161/321 (50%), Positives = 217/321 (67%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P+ W + + ++ M+E + + + ++ ++ D L+E+ EE+D S++ E + Sbjct: 2 EAPNFWDDPVVSQKKMKELKSMKDDVATYASLKTEFEDIETLIEMGYEENDASLIPEIQE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L E + ++LLSGE DS+ A + +HAGAGGTES DWA ML RMYTRWA + F Sbjct: 62 MLDEFTKTYEGIRIKTLLSGEYDSDGAIVSLHAGAGGTESCDWAAMLYRMYTRWASDKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+ DGEEAGIKS T I G NAYG++K E+GVHRLVRISP+++ +R TSF S Sbjct: 122 SVEVLDSLDGEEAGIKSITFQINGENAYGYMKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ +++EI+E D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ Sbjct: 182 VMPDIEEDLDVEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK +A ML+AKLY L+ Q+ E A TEIGWG QIRSYV+QPY MVKD RT + Sbjct: 242 QNKDKAMQMLKAKLYLLKQQENAEKAADIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTGV 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DG +D F+ L Sbjct: 302 ETGNVDSVMDGKIDIFINGYL 322 >gi|51245661|ref|YP_065545.1| peptide chain release factor 2 [Desulfotalea psychrophila LSv54] gi|50876698|emb|CAG36538.1| probable peptide chain release factor 2 [Desulfotalea psychrophila LSv54] Length = 285 Score = 328 bits (841), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 158/281 (56%), Positives = 206/281 (73%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LLE+A EE D I QE + L + + E + GE DS +A + +HAGAGGTE+ Sbjct: 1 MLLEMAAEEGDQEIEQEIALKLGSFANALAAIELECMFIGEHDSCNAIISIHAGAGGTEA 60 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ++LLRMY RWAE+ KFKTE L++ G+EAG KS T+LIKG AYG+L+ E G+HRL Sbjct: 61 QDWTDILLRMYLRWAERHKFKTEILDLLPGDEAGTKSITILIKGQWAYGYLRSELGIHRL 120 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D++ RRHTSF+S+ V P +D++++++I E D R+DTYRASGAGGQHVN TDSA+ Sbjct: 121 VRISPFDTSGRRHTSFASVMVMPELDNTVDVDIDEKDLRVDTYRASGAGGQHVNKTDSAI 180 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PTGVVVQCQ ERSQH+NK A ML A++Y+LE QK+ + K I WG Sbjct: 181 RLTHLPTGVVVQCQNERSQHRNKEMAMKMLIAQIYQLEKQKKADQQEGLHGEKKGISWGS 240 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVLQPY+++KD RT+ E + VLDG LD F+KA L Sbjct: 241 QIRSYVLQPYRLIKDHRTDFEAGNVDAVLDGGLDGFIKAFL 281 >gi|300913271|ref|ZP_07130588.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561] gi|300889956|gb|EFK85101.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561] Length = 368 Score = 328 bits (841), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 167/344 (48%), Positives = 232/344 (67%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD ++ + + ++ K DP W ++ +++ L ++++ L + + + D Sbjct: 20 GFLFDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLS 79 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+EL LEE D SI E + +K ++E + ++LL+G D N+A L +HAG+GGTE+ Sbjct: 80 TLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEA 139 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWA + F+ E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRL Sbjct: 140 QDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRL 199 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+ RRHTSF+ + V P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAV Sbjct: 200 VRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAV 259 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + E WG Sbjct: 260 RITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGN 319 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV QPY +VKD RTN E + V+DG++D F+ A L K Sbjct: 320 QIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363 >gi|326790220|ref|YP_004308041.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427] gi|326540984|gb|ADZ82843.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427] Length = 369 Score = 328 bits (840), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 169/347 (48%), Positives = 229/347 (65%), Gaps = 8/347 (2%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC-- 67 +G D + + S L + D W ++ A+ ++++ ++ + I E D+LC Sbjct: 21 MGNRLDIEGCKVKASELEEMSMDNAFWNDIERAQSVLQQLKNYKDRI----EKYDKLCGS 76 Query: 68 --DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 D L+L+E+A E++D + +E + + + +LL E D N+A LE+H GA Sbjct: 77 FEDILVLIEMANEDEDIGLAEEAKACAKTFEEDYSEMLTATLLDQEYDRNNAILELHPGA 136 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+ DW ML RMYTRWA+++ FK E L+ DG+EAGIKS T+ I G NAYG+LK E+ Sbjct: 137 GGTEACDWVAMLFRMYTRWADRKGFKVEVLDYLDGDEAGIKSVTIQISGENAYGYLKSEK 196 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G+HRLVRISP+DS+ RRHTSF+S V P + D IEI+I D RIDTYR++GAGGQHVNT Sbjct: 197 GIHRLVRISPFDSSGRRHTSFASCDVIPEITDEIEIDIRPEDLRIDTYRSTGAGGQHVNT 256 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PT +VVQCQ ERSQ +N+ +A ML+AKLYE E ++R + + K + Sbjct: 257 TDSAVRITHLPTNIVVQCQNERSQIQNRERAMQMLKAKLYEKEQEERMDRIDGIRGEKKD 316 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 I WG QIRSYV PY MVKD RT+ E + S V+DGD+D FM A L Sbjct: 317 IAWGSQIRSYVFHPYNMVKDHRTSEETGNTSAVMDGDIDRFMNAYLG 363 >gi|154687644|ref|YP_001422805.1| hypothetical protein RBAM_032440 [Bacillus amyloliquefaciens FZB42] gi|154353495|gb|ABS75574.1| PrfB [Bacillus amyloliquefaciens FZB42] Length = 327 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 167/323 (51%), Positives = 219/323 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + +A+ ++ E L ++ ++ + + + +L EE D + QE Sbjct: 3 EPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKEEPDQDLQQELEKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R FK Sbjct: 63 LKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P ++ I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K Sbjct: 183 MPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGD+D F+ A L K Sbjct: 303 MGNVQAVMDGDIDIFIDAYLRSK 325 >gi|269850236|gb|ACZ49981.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. Ames] Length = 365 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 170/350 (48%), Positives = 226/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 12 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N A LE+ Sbjct: 72 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 361 >gi|149927857|ref|ZP_01916108.1| peptide chain release factor 2 [Limnobacter sp. MED105] gi|149823479|gb|EDM82710.1| peptide chain release factor 2 [Limnobacter sp. MED105] Length = 304 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 156/300 (52%), Positives = 215/300 (71%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 LD + + +Q + D+ L+E+A E D L+ + + + +F + S Sbjct: 2 LDGVVVTMNTVQSNISDSKELVEMAEAEGDFDTLEAIESEVAEYEKVIADLEFRRMFSNP 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD + ++++ AGAGGTE+QDWA++LLR Y R+ E++ FK E +E DGE AGIKSAT+ Sbjct: 62 ADPANCFIDITAGAGGTEAQDWASILLRQYLRYCERKGFKVEVMEQSDGEVAGIKSATIK 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 ++G A+G+L+ E GVHRLVR SP+DS+ RHTSF+S++VYP VDDS EIEI+ +D R D Sbjct: 122 VEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSFEIEINPADVRTD 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYRASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW ML+AKLYE E++K Sbjct: 182 TYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWGMLKAKLYEFEMRK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R E +KT++GWG QIRSYVL + +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 242 RMAEQQALEDTKTDVGWGHQIRSYVLDNSR-IKDLRTGVEISNTQRVLDGDLDPFIEASL 300 >gi|21231300|ref|NP_637217.1| peptide chain release factor 2 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768648|ref|YP_243410.1| peptide chain release factor 2 [Xanthomonas campestris pv. campestris str. 8004] gi|188991534|ref|YP_001903544.1| peptide chain release factor 2 [Xanthomonas campestris pv. campestris str. B100] gi|21112954|gb|AAM41141.1| putative peptide release factor 2 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573980|gb|AAY49390.1| putative peptide release factor 2 [Xanthomonas campestris pv. campestris str. 8004] gi|167733294|emb|CAP51493.1| peptide chain release factor 2 [Xanthomonas campestris pv. campestris] Length = 313 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 164/300 (54%), Positives = 217/300 (72%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L+ + I ++ L D LL+LA E D +L + + VE +F+ + SG+ Sbjct: 2 LEKTVIGIADVLAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQ 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+ GE AGIKSAT+ Sbjct: 62 MDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIR 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D Sbjct: 122 IEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTD 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ A ML AKLYELE+QK Sbjct: 182 VYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E++K++IGWG QIR+YVL + +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 242 RNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRTGIERSDTQKVLDGDLDEFVEASL 300 >gi|327441322|dbj|BAK17687.1| protein chain release factor B [Solibacillus silvestris StLB046] Length = 328 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 171/323 (52%), Positives = 220/323 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + A+ ++ E + ++ KE+ D + + LEL EE D + +E Sbjct: 3 EPEFWNDQNGAQAIINESNGIKAVVNEYKELVDTQENLEMTLELLREEPDEELQEEIGKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + ++E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK Sbjct: 63 LAEFQTKMEEFELQMLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 ++ G+EAGIKS TL I G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VTTIDYLPGDEAGIKSVTLQISGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D IEI+I D ++DTYRA+GAGGQH+NTTDSAVRITH+PTGVVVQCQ ERSQ K Sbjct: 183 MPEFNDEIEIDIRTEDLKVDTYRATGAGGQHINTTDSAVRITHLPTGVVVQCQSERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML++KLY+LE++K++ + + EIGWG QIRSYV PY MVKD RT+ E Sbjct: 243 NRDAAMKMLKSKLYQLEIEKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTSAE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGDLD F+ A L K Sbjct: 303 TGNVGAVMDGDLDIFITAYLRSK 325 >gi|16804547|ref|NP_466032.1| peptide chain release factor 2 [Listeria monocytogenes EGD-e] gi|16411997|emb|CAD00587.1| prfB [Listeria monocytogenes EGD-e] Length = 327 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 167/320 (52%), Positives = 214/320 (66%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP+ W + A+ ++ E +++ I LEL EE D + +E + Sbjct: 3 DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK Sbjct: 63 IKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K Sbjct: 183 MPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLDDF+ A L Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322 >gi|227817946|ref|YP_002817955.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. CDC 684] gi|229604792|ref|YP_002869406.1| peptide chain release factor 2, programmed [Bacillus anthracis str. A0248] gi|227003828|gb|ACP13571.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. CDC 684] gi|229269200|gb|ACQ50837.1| peptide chain release factor 2, programmed [Bacillus anthracis str. A0248] Length = 380 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 170/350 (48%), Positives = 226/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376 >gi|261491637|ref|ZP_05988220.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494996|ref|ZP_05991465.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309405|gb|EEY10639.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312763|gb|EEY13883.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 304 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 164/303 (54%), Positives = 216/303 (71%), Gaps = 7/303 (2%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET---SDNLQRIKLEVEYKQFESLL 108 L+ ++ IK ++ + D L+ELA+E +D E +D L++ ++E+K+ + Sbjct: 2 LEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVEADELEKKLADLEFKR---MF 58 Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 SG DS D YL++ AG+GGTE+QDW MLLRMY RWAE + FK E +E DG+ AGIKSA Sbjct: 59 SGPHDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKAELMEASDGDVAGIKSA 118 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 T+ I G AYGW + E G+HRLVR SP+D+N+ RHTSFS+ +VYP VDD I+IEI+ +D Sbjct: 119 TVKISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFSAAFVYPEVDDDIDIEINPADL 178 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+NK QA L+AKLYELE Sbjct: 179 RIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYELE 238 Query: 289 LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + K+ E +K++IGWG QIRSYVL + +KD RT +E + VLDGDLD F++ Sbjct: 239 MSKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDHRTGVEHRTTQQVLDGDLDKFVE 297 Query: 349 ATL 351 A+L Sbjct: 298 ASL 300 >gi|293390164|ref|ZP_06634498.1| peptide chain release factor 2 [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950698|gb|EFE00817.1| peptide chain release factor 2 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 300 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 167/296 (56%), Positives = 218/296 (73%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 ++ IK ++ L D LLELA+E D E L ++ ++E +F + SGE D+ Sbjct: 2 VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAIAELNALEQQLEKLEFRRMFSGEHDAC 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G Sbjct: 62 DCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRA Sbjct: 122 YAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ Sbjct: 182 SGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 242 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 296 >gi|254900353|ref|ZP_05260277.1| peptide chain release factor 2 [Listeria monocytogenes J0161] Length = 327 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 167/320 (52%), Positives = 214/320 (66%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP+ W + A+ ++ E +++ I LEL EE D + +E + Sbjct: 3 DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ FK Sbjct: 63 IKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ V Sbjct: 123 VEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ K Sbjct: 183 MPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLDDF+ A L Sbjct: 303 TGNIQAVMDGDLDDFINAYL 322 >gi|126643323|ref|YP_001086307.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978] Length = 278 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 154/260 (59%), Positives = 197/260 (75%), Gaps = 1/260 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +L+LA+E DD S+L++ L + E+ +F + S D N Y+E+ AG+GGTE+Q Sbjct: 1 MLDLAVEADDESLLEDVQSELSTAEEELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RW E+ FK E +E+ DG+ AGIKSAT+ ++G AYGWL+ E GVHRLV Sbjct: 61 DWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS +RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR Sbjct: 121 RKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIPTG+VV CQ +RSQH N+ AW LRAKLYELE+QKR E A E SK++IGWG Q Sbjct: 181 LTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALEDSKSDIGWGSQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIE 331 IRSYVL + +KDLRT +E Sbjct: 241 IRSYVLDDSR-IKDLRTGVE 259 >gi|126652452|ref|ZP_01724624.1| peptide chain release factor 2 [Bacillus sp. B14905] gi|126590723|gb|EAZ84838.1| peptide chain release factor 2 [Bacillus sp. B14905] Length = 328 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 172/321 (53%), Positives = 226/321 (70%), Gaps = 2/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSD 90 +P W + A++++ E L ++ KE+++ + +NL + LEL EE D + +E Sbjct: 4 EPGFWDDQQGAQVIINEGNGLKAIVNEYKELEE-IHENLDMTLELLREEPDEELQEELGK 62 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + ++ + + LLSG D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR F Sbjct: 63 ELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGF 122 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E ++ G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 123 KVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVSCD 182 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P D++IEI+I D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERSQ Sbjct: 183 VMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERSQI 242 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ +A ML+ KLY+LEL+K++ + + +IGWG QIRSYV PY MVKD RTN Sbjct: 243 KNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTNE 302 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DGD+D F+ A L Sbjct: 303 ETGNVGAVMDGDVDPFINAYL 323 >gi|282882039|ref|ZP_06290680.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B] gi|300814941|ref|ZP_07095169.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281298069|gb|EFA90524.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B] gi|300510911|gb|EFK38183.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 370 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 178/350 (50%), Positives = 239/350 (68%), Gaps = 10/350 (2%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L+ L D + ++ LN K + + W + +A+ +++E ++ EI D + Sbjct: 19 LDELALSLDVNGLRDKIKELNKKQMEQNFWDDNEKAQKIIKELNSYQRKVNPYDEISDLI 78 Query: 67 CD-NLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEV 121 D N ILL + +E+D S D +++ L +E K + E+LL+GE D NDA L + Sbjct: 79 EDANDILLLMEMEDDYSSY-----DEFKKLILNIEKKVSEYKLETLLNGEFDENDAILSI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDWA+MLLRMY R+A + FK E L+I +EAGIKS TL I G +AYG+L Sbjct: 134 HAGAGGTEAQDWASMLLRMYVRYATNKGFKVETLDILKEDEAGIKSVTLKISGEHAYGFL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE+GVHRLVRISP+D+N RRHTSFSS+ V+P +D I+IEI + D +IDTYR+SGAGGQ Sbjct: 194 KGEKGVHRLVRISPFDANKRRHTSFSSVDVFPDIDGDIDIEIKDEDLKIDTYRSSGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VVQCQ ERSQ +N+ +A L+AKL L ++R+E + + Sbjct: 254 HVNTTDSAVRITHIPTGIVVQCQNERSQIQNRERAMQTLKAKLLALAEEERKEKIDDLQG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + ++I WG QIRSYV QPY +VKD RTN E + V+DGDLD F+ A L Sbjct: 314 NYSQIAWGSQIRSYVFQPYTLVKDHRTNCEVGDVNKVMDGDLDPFINAYL 363 >gi|294634840|ref|ZP_06713362.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685] gi|291091713|gb|EFE24274.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685] Length = 293 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 167/280 (59%), Positives = 211/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++++++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFDEAVAELDQLEVKLGQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE + FKTE +E +GE AG+KSAT+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEVQKKNAERQQMEENKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 289 >gi|255528153|ref|ZP_05394980.1| peptide chain release factor 2 [Clostridium carboxidivorans P7] gi|255508166|gb|EET84579.1| peptide chain release factor 2 [Clostridium carboxidivorans P7] Length = 326 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 161/322 (50%), Positives = 229/322 (71%), Gaps = 2/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W + +A+ + E + L + + KE++ ++ D L +LA+EE+D S ++ Sbjct: 2 QEPNFWNDTDKAQEITSEERFLKSRLDKYKELETKIQDAEFLTKLAIEENDLSSSKDIIR 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 ++ I E E + E LLSGE D N+A +++H G GGT++QDW MLLRMYTRWAEK+ F Sbjct: 62 EVEEIDNETERFRIEILLSGEYDKNNAIMDIHVGVGGTDAQDWTEMLLRMYTRWAEKKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E ++I E+AGIKSATL I G AYG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 122 KIETVDILPAEDAGIKSATLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASIE 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + ++ +I+I D ++DTYR+SGAGGQHVN T+SA+RITHIPTG+VVQCQ +RSQH Sbjct: 182 VLPELTNNQDIDIKPDDIKVDTYRSSGAGGQHVNKTESAIRITHIPTGIVVQCQNQRSQH 241 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ +A ML+AKL EL E +E+I ++ K ++GWG QIRSYV QPY MVKD RT+ Sbjct: 242 HNREEAMRMLKAKLAELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFQPYTMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E + + V+DGD+D F+ L Sbjct: 301 VECGNINAVMDGDIDQFINEYL 322 >gi|238921196|ref|YP_002934711.1| peptide chain release factor 2, [Edwardsiella ictaluri 93-146] gi|238870765|gb|ACR70476.1| peptide chain release factor 2, putative [Edwardsiella ictaluri 93-146] gi|304560096|gb|ADM42760.1| Peptide chain release factor 2 [Edwardsiella tarda FL6-60] Length = 293 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 167/280 (59%), Positives = 209/280 (74%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L + +++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELDLLDVKLGQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE + FKTE +E +GE AG+KSAT+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMEDTKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 289 >gi|127511745|ref|YP_001092942.1| peptide chain release factor 2 [Shewanella loihica PV-4] gi|126637040|gb|ABO22683.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella loihica PV-4] Length = 293 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 155/280 (55%), Positives = 205/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+EEDD + + L ++ +E +F + SG D++D YL++ +G+GGTE+Q Sbjct: 11 LLELAVEEDDEDTFNDANSELAGLEKRLEELEFRRMFSGPNDASDCYLDIQSGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWANM+LRMY RW E + +K E +E+ DG+ AGIK AT+ G A+G L+ E GVHRLV Sbjct: 71 DWANMVLRMYLRWGEAKGYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS+ +RHTSF S++VYP +DDSIEI+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Q Sbjct: 191 ITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 251 IRSYVLDDAR-IKDLRTGVENRNTQSVLDGDLDKFIEASL 289 >gi|94264473|ref|ZP_01288261.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1] gi|93455104|gb|EAT05328.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1] Length = 303 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 152/281 (54%), Positives = 207/281 (73%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ILLELA+ E+D QE + +L+ ++ + + E + SGE D+N+A L +HAGAGGTE+ Sbjct: 20 ILLELAIAEEDRETEQEVAGHLKNLESRLAELELECMFSGEHDANNAILTIHAGAGGTEA 79 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW +LLRMY RWAE + F T+ L++ G+EAGIK T+++KG AYG+L+ E G+HRL Sbjct: 80 QDWVEILLRMYLRWAENKGFTTDTLDLLPGDEAGIKGVTVMVKGRWAYGYLRSEMGIHRL 139 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+ RRHTSF+S++++P + D I +E+++ D RIDT+RASGAGGQHVN T SA+ Sbjct: 140 VRISPFDTGGRRHTSFASVFIFPELTDDIAVEVNDKDLRIDTFRASGAGGQHVNKTSSAI 199 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTG+V QCQ ERSQH+NK A ML+A+LYE + +R E K EI WG Sbjct: 200 RITHLPTGIVAQCQNERSQHRNKDTAMKMLKAQLYERQQAQRREDQEHLHGDKKEIAWGS 259 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVLQPY++VKD RT+ E + VLDG++D F+K+ L Sbjct: 260 QIRSYVLQPYRLVKDHRTDHETGNVDSVLDGNIDPFIKSYL 300 >gi|269140268|ref|YP_003296969.1| protein chain release factor B [Edwardsiella tarda EIB202] gi|267985929|gb|ACY85758.1| protein chain release factor B [Edwardsiella tarda EIB202] Length = 289 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 167/280 (59%), Positives = 209/280 (74%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L + +++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 7 LLELAVEADDEETFNEAVAELDLLDVKLGQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE + FKTE +E +GE AG+KSAT+ I G AYGWL+ E GVHRLV Sbjct: 67 DWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWLRTETGVHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 187 ITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMEDTKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT++E + VLDGDLD F++A+L Sbjct: 247 IRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASL 285 >gi|332686413|ref|YP_004456187.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311] gi|332370422|dbj|BAK21378.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311] Length = 328 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 168/323 (52%), Positives = 221/323 (68%), Gaps = 6/323 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 D + W N +A+ ++ E ++ D L + I+ EL + D +I E Sbjct: 3 DVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYELQQVDFDEAIQTEL--- 59 Query: 92 LQRIK-LEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +QRIK LE + K +E LL+G D N+A +E H GAGGTESQDW +MLLRMY RWAE R Sbjct: 60 IQRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAESR 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S Sbjct: 120 NFQIEVLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + + P +D++IEI+I+ D ++DTYRASGAGGQH+N T+SAVRITHIPT VV Q +RS Sbjct: 180 VDIMPELDETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVVSSQAQRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ QA L++KLY+LE++K+ + + + EIGWG QIRSYV PY MVKD RT Sbjct: 240 QLKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIGWGSQIRSYVFHPYSMVKDHRT 299 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 N+E + V+DG++D+F+ A L Sbjct: 300 NMETGNVQAVMDGEIDNFIDAYL 322 >gi|91784239|ref|YP_559445.1| peptide chain release factor 2 [Burkholderia xenovorans LB400] gi|91688193|gb|ABE31393.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia xenovorans LB400] Length = 280 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 156/277 (56%), Positives = 210/277 (75%), Gaps = 1/277 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EE D L + Q I+ V +F + + AD N+A+L++ AGAGGTE+ DWA Sbjct: 1 MAREEGDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GVHRLVR S Sbjct: 61 AMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 121 PFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ KT++GWG QIRS Sbjct: 181 LPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL + +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 241 YVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 276 >gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563] gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563] Length = 353 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 164/345 (47%), Positives = 219/345 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GGLFD + L+ P W + +A+ ++ L + D Sbjct: 1 MTASGGLFDLEKMEADLAEYEADMVQPGFWDDSEKAQSVIDANNALKKVYDEFNNLADEY 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + +L E+ EE D + +E + +Q + ++ + LLSGE D NDA LE+H GAG Sbjct: 61 EELTLLNEMVKEEPDPDLSKELVNRIQAFQAKISAYERNILLSGEYDHNDALLEIHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA+MLLRMY RWA++ ++ L+ +G+EAGIKS TL IKG NAYG+LK E G Sbjct: 121 GTESQDWASMLLRMYQRWADQHDYQVTTLDFQNGDEAGIKSVTLEIKGLNAYGFLKSEDG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+DSN RRHTSF+S+ + PV+D + EIEI ESD +D +RASGAGGQH+N T Sbjct: 181 IHRLVRISPFDSNKRRHTSFASVEIMPVLDQNTEIEIDESDIEMDVFRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q +RSQ +N+ A ML+AKL L +K + + K+EI Sbjct: 241 SSAVRLTHVPTGIVVASQGQRSQFQNRDTAMKMLQAKLAHLLAEKNAKELDEIRGEKSEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L Sbjct: 301 AWGSQIRSYVFHPYNMVKDHRTDYETANVQGVMDGDLDGFIDAYL 345 >gi|261250316|ref|ZP_05942892.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891] gi|260939432|gb|EEX95418.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891] Length = 263 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 151/260 (58%), Positives = 201/260 (77%), Gaps = 1/260 (0%) Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ ++E +F + SG+ DS+D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FK Sbjct: 1 MAELEAKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFK 60 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 TE +E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++ Sbjct: 61 TEVIEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFI 120 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP +DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHK Sbjct: 121 YPEIDDNIQIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHK 180 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK QA LRAKL+ELE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E Sbjct: 181 NKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVE 239 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + VLDGDLD F++A+L Sbjct: 240 NRNTQAVLDGDLDKFIEASL 259 >gi|257893004|ref|ZP_05672657.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408] gi|257829383|gb|EEV55990.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408] Length = 338 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 156/276 (56%), Positives = 202/276 (73%) Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE D ++ +E + + +++ + LL G D N+A +E+H GAGGTESQDW +ML Sbjct: 60 EEPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSML 119 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 LRMYTRWAE+ ++ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+D Sbjct: 120 LRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFD 179 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S RRHTSF S+ V P +D++I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITH+PT Sbjct: 180 SAKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPT 239 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G VV Q +RSQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV Sbjct: 240 GTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVF 299 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 PY MVKD RTN+E + V+DGDLD F+ L + Sbjct: 300 HPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKM 335 >gi|297172687|gb|ADI23654.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF4000_15H13] Length = 328 Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 153/253 (60%), Positives = 195/253 (77%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 VE + ++L G+ D A + +H GAGGTESQDWA ML+RMYTRWAE+ F L++ Sbjct: 70 VEALELRTMLQGDDDHRGAIITIHPGAGGTESQDWAQMLVRMYTRWAERGGFTVNVLDLQ 129 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 EEAGIKSATL I G +AYG+LK E GVHRLVRISP+D+ +RRHTSF+S+++YP VDDS Sbjct: 130 PAEEAGIKSATLEINGESAYGFLKAEGGVHRLVRISPFDAQARRHTSFASVFIYPQVDDS 189 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEIEI++ D R+DTYRASGAGGQHVN TDSAVR+TH PTG+VVQCQQERSQHKN+A A Sbjct: 190 IEIEINDDDLRVDTYRASGAGGQHVNKTDSAVRLTHAPTGIVVQCQQERSQHKNRATAMK 249 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 ML A+LY+ L+++++ + E+SK +IG+G QIRSYV QPY MV D RT ++ T V Sbjct: 250 MLLARLYQHALEEKKKERAVLEASKRDIGFGNQIRSYVFQPYTMVNDHRTELKITDVQSV 309 Query: 339 LDGDLDDFMKATL 351 +DG +D F++A L Sbjct: 310 MDGAIDPFIEAYL 322 >gi|323706500|ref|ZP_08118060.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534162|gb|EGB23953.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum LX-11] Length = 327 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 155/323 (47%), Positives = 224/323 (69%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W ++ + + L ++++ L IS + ++ + D L+EL LEE D S+ QE + Sbjct: 3 EPDFWNDLEKFQELSKKQKDLKEIISEYEALEKQWEDLHTLIELGLEEGDESLSQEVHEE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + ++ + ++LLSG D N+A L +HAGAGGTE+QDW MLLRMY RWA + + Sbjct: 63 YKALSKKINDMKIKTLLSGPYDKNNAILSIHAGAGGTEAQDWTEMLLRMYMRWASSKNYD 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G++AG+KS T+++KGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + V Sbjct: 123 VETVDYLPGDDAGVKSVTIMVKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD I+++I D +IDTYR+SGAGGQHVN T+SA+RITHIPTG++VQCQ ERSQ + Sbjct: 183 LPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIVQCQTERSQMQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML+AKL ++ +++++E + E GWG QIRSYV QPY +VKD RTN E Sbjct: 243 NRETAMKMLKAKLMDMMIKEQKEKIEDLKGEHKEAGWGNQIRSYVFQPYTLVKDHRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + + V+DG++DDF+ A L K Sbjct: 303 VGNVNAVMDGEIDDFINAYLKQK 325 >gi|187734757|ref|YP_001876869.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC BAA-835] gi|187424809|gb|ACD04088.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC BAA-835] Length = 329 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 162/319 (50%), Positives = 216/319 (67%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A+ LM E L + + ++ RL D +ELA E DD + +E + Sbjct: 4 PDFWDDQNAARALMAEVNPLKHRMEAFSALKSRLEDIDAAIELAQEADDDDLGREAVEEF 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 R + + + +LL+G D Y+ +HAGAGGTE+ DWA+MLLRMY RW E+R F Sbjct: 64 ARWQKSLADFELLTLLNGPQDQASCYVTIHAGAGGTEACDWASMLLRMYIRWCERRGFSV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 LE DG++AGI+S TL + G AYG+LK E+G+HRLVRISP+DS +RHTSF+S+ Sbjct: 124 TYLESTDGDDAGIRSVTLKVDGEYAYGYLKNERGIHRLVRISPFDSAGKRHTSFASLDAT 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P V DSI IEI + D ++DTYR+ G GGQ+VN ++AVRITHIP+GV+V CQ ERSQ +N Sbjct: 184 PEVSDSINIEILDKDLKVDTYRSGGKGGQNVNKVETAVRITHIPSGVIVACQNERSQLRN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 K +A NMLRAKLY++E K++ A+ S K +IGWG QIRSYV QPYQMVKDLRT +E Sbjct: 244 KEEAMNMLRAKLYQIEEDKKQAEADRQYSEKGDIGWGNQIRSYVFQPYQMVKDLRTGVES 303 Query: 333 TSPSDVLDGDLDDFMKATL 351 + DV+DG+LD F++A L Sbjct: 304 GNIQDVMDGNLDPFIEAML 322 >gi|325474491|gb|EGC77678.1| peptide chain release factor 2 [Treponema denticola F0402] Length = 320 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 163/309 (52%), Positives = 211/309 (68%), Gaps = 1/309 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M E + L N I +E+ D + D +L+EL+ E + + +E N + + + Sbjct: 1 MGEIKALKNRIYPWQELMDEVSDLEVLMELSEESGNEELSEEIGSNYNSVYEKYKKLSIL 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGE D NDAYL VHAGAGGTE+ DWA ML+RMY RW E R FKTE +++ + E GI Sbjct: 61 SLLSGEVDKNDAYLTVHAGAGGTEACDWAGMLVRMYLRWCESRGFKTETIDVVEAE-GGI 119 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT I G A+G LK E G+HRLVRISP+DSN RRHTSF+S++ +PV+DD+IE++I Sbjct: 120 KSATFQISGEFAFGLLKSETGIHRLVRISPFDSNGRRHTSFTSVFAFPVLDDTIEVDIRP 179 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTYRA GAGGQHVN TDSAVRITHIPTG+VV CQ +RSQ N+A A N+L+++LY Sbjct: 180 EDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVVACQTQRSQISNRATAMNVLKSRLY 239 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +++E+ + K I WG QIRSYV QPY MVKD RT E + V+DGD+D+ Sbjct: 240 NYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYTMVKDHRTKYETGNIQAVMDGDIDE 299 Query: 346 FMKATLAIK 354 F+ + L K Sbjct: 300 FINSFLNTK 308 >gi|284048024|ref|YP_003398363.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM 20731] gi|283952245|gb|ADB47048.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM 20731] Length = 366 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 167/350 (47%), Positives = 231/350 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L L G +R+ L + P W + +A+ + +E +L + Sbjct: 12 QLKDKLEELKGGLKIAQKEERIEDLEHQMAAPGFWDDPDKAQTVAQEANNLKTEVETYHG 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +L D L E+A+EE D S+ E + ++ + + + LLS + D+N+A L + Sbjct: 72 LAAKLDDVETLWEMAMEEKDDSLQGEIEEEVENARKTLADLELGMLLSDQYDANNAILTL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW NMLLRMYTR+AE++ F E L++ GEEAGIKSATL ++G NAYG+L Sbjct: 132 HAGAGGTEAQDWTNMLLRMYTRYAEQKGFTVELLDVLPGEEAGIKSATLTVQGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+N+RRHTSF+++ V P +D+++E+ ++ D R+D YRASGAGGQ Sbjct: 192 KSEKGVHRLVRISPFDANARRHTSFAAVDVMPELDETVEVNLNMDDVRVDYYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVR+THIPTG+VVQCQ ERSQ +NK + +LRAKLYE E +++ + Sbjct: 252 HVNKTSSAVRMTHIPTGIVVQCQNERSQLQNKERCLALLRAKLYEYEKAIQDKKISELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIRSYV QPY MVKD RT E + V+DGDLD F++A L Sbjct: 312 DYQAIEWGSQIRSYVFQPYTMVKDHRTGAETGNIQAVMDGDLDPFVEAYL 361 >gi|170694748|ref|ZP_02885899.1| peptide chain release factor 2 [Burkholderia graminis C4D1M] gi|170140379|gb|EDT08556.1| peptide chain release factor 2 [Burkholderia graminis C4D1M] Length = 280 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 156/277 (56%), Positives = 210/277 (75%), Gaps = 1/277 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EE D L + Q ++ V +F + + AD N+A+L++ AGAGGTE+ DWA Sbjct: 1 MAREEGDDETLVACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GVHRLVR S Sbjct: 61 AMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS+ RHTSFSS++VYP VDDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 121 PFDSSGGRHTSFSSVFVYPEVDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ KT++GWG QIRS Sbjct: 181 MPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL + +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 241 YVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISASL 276 >gi|212637017|ref|YP_002313542.1| peptide chain release factor 2 [Shewanella piezotolerans WP3] gi|212558501|gb|ACJ30955.1| Peptide chain release factor 2 [Shewanella piezotolerans WP3] Length = 293 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 155/280 (55%), Positives = 204/280 (72%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+EEDD + S L ++ +E +F + SG D+ D YL++ +G+GGTE+Q Sbjct: 11 LLELAVEEDDEETFNDASAELDDLEKRLEELEFRRMFSGPHDAADCYLDIQSGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWANM+LRM+ RW E +K E +E+ DG+ AGIK AT+ G A+G L+ E GVHRLV Sbjct: 71 DWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+R Sbjct: 131 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAIR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ ++ E +K++IGWG Q Sbjct: 191 ITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLRQNADKQAAEDAKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 251 IRSYVLDDAR-IKDLRTGVENRNTQSVLDGDLDKFIEASL 289 >gi|256848105|ref|ZP_05553549.1| peptide chain release factor 2 [Lactobacillus coleohominis 101-4-CHN] gi|256715165|gb|EEU30142.1| peptide chain release factor 2 [Lactobacillus coleohominis 101-4-CHN] Length = 332 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 160/319 (50%), Positives = 213/319 (66%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ L+ + L ++D+L D +EL E D + +E L Sbjct: 4 PDFWNDSEQAQKLINDNNQLKERRDTFTNLRDQLADLATSVELLKEMPDDDLQKELDQKL 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +++ ++E + LLSG D+N+A LE+H GAGGTE+QDW MLLRMY RWA++ F Sbjct: 64 PQVEKQLEQYRLSQLLSGPYDANNAILEIHPGAGGTEAQDWGEMLLRMYLRWADQHSFDV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E GEEAGIKS TLLIKG NA+G+L E+GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 124 ETAAYEAGEEAGIKSVTLLIKGHNAFGYLHPEKGVHRLVRISPFDAAGRRHTSFASVDVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +D+S+E++I SD R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V Q ERSQ +N Sbjct: 184 PELDESVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPTGIVTSSQAERSQLQN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD RT E Sbjct: 244 RVTAMNMLKSKLYELEQEKQAKQRAELEGEQLEIGWGSQIRSYVFHPYTLVKDNRTGYET 303 Query: 333 TSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 304 HDGQSVMDGDLDPFINAYL 322 >gi|253680935|ref|ZP_04861738.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873] gi|253562784|gb|EES92230.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873] Length = 327 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 170/326 (52%), Positives = 235/326 (72%), Gaps = 2/326 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++ + W N+ +A+ + +E + L + I ++RL D +L+E+++EEDD S ++E + Sbjct: 2 QESNFWDNINKAQEITQEAKGLKDKIEKYYNTKNRLEDLKVLIEISIEEDDESSVEEILN 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 ++ +K+ ++ + + LLSGE D N+A + +HAGAGGT++QDW MLLRMYTRWAE + + Sbjct: 62 EIKEVKVIIDEFKVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWAEAKGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E L+I G+EAGIKSA+L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 122 KVEILDILPGDEAGIKSASLKIMGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASLE 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + +S +IEI D RIDTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ Sbjct: 182 VLPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQF 241 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A +ML++KL EL E +E+I ++ K EIGWG QIRSYV QPY MVKD RTN Sbjct: 242 QNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLK-EIGWGSQIRSYVFQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E T+ V+DGD+D F+ L + K Sbjct: 301 TEMTNVDAVMDGDIDIFIVEYLKVNK 326 >gi|332381658|gb|AEE66505.1| peptide chain release factor 2 [Bordetella pertussis CS] Length = 293 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 154/286 (53%), Positives = 216/286 (75%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D+ L+ELAL + D + L+ + R + ++E +F + + AD + ++++ AGA Sbjct: 5 LADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQAGA 64 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLR Y ++AE++ FK E LE +G+ AG+KSAT+ I+G A+G+L+ E Sbjct: 65 GGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTET 124 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+N Sbjct: 125 GVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINK 184 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SKT+ Sbjct: 185 TDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTD 244 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 245 VGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 289 >gi|257886811|ref|ZP_05666464.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733] gi|257822865|gb|EEV49797.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733] Length = 327 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 156/282 (55%), Positives = 204/282 (72%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++++ EE D + +E + + ++ + LL G D N+A +E+H GAGGTESQ Sbjct: 43 MVDMLQEEPDAVMQEEAETRINALDEKMNTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW +MLLRMYTRWAE+ ++ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLV Sbjct: 103 DWGSMLLRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKAEKGVHRLV 162 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DS RRHTSF S+ V P +D++I+IEI+ D +IDTYRASGAGGQH+N T+SAVR Sbjct: 163 RISPFDSAKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVR 222 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PTG VV Q +RSQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG Q Sbjct: 223 ITHLPTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQ 282 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYV PY MVKD RTN+E + V+DGDLD F+ L + Sbjct: 283 IRSYVFHPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKM 324 >gi|172058432|ref|YP_001814892.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15] gi|229576666|sp|B1YLH0|RF2_EXIS2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|171990953|gb|ACB61875.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15] Length = 366 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 167/351 (47%), Positives = 231/351 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++L+ D + + R+ L + P W N A+ ++ E L + + + Sbjct: 13 MEKKLDEYKASLDLETKISRIEELENEMTYPDFWNNQESAQKVIDESNGLKAMVDKYQHL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D + ++ EL EE D + +E L IK + + + + LL+GE D+N+A LE+H Sbjct: 73 ADGHENIVLTYELIKEEPDVELQEELESELGDIKKKFDEFELQILLNGEYDANNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMY R+ +K+ +K E ++ G+EAG+KS TL I+G NAYG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYQRFCDKQGWKVETMDYQPGDEAGVKSVTLRIQGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+G+HRLVRISP+DS+ RRHTSF S V P +D I+IEI D R+DTYRASGAGGQH Sbjct: 193 AEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFNDDIDIEIRTEDLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+PTGVVV CQQERSQ KN+ A ML+AKLY+ E++++++ + Sbjct: 253 INTTDSAVRITHVPTGVVVSCQQERSQIKNREAAMKMLKAKLYQREIEEKQKKLDEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++I WG QIRSYV PY MVKD RTN E + +DGD+ F+ A L + Sbjct: 313 KSDIAWGSQIRSYVFHPYSMVKDHRTNYEVGNTQGAMDGDIMGFIDAYLRL 363 >gi|227552028|ref|ZP_03982077.1| peptide chain release factor 2 [Enterococcus faecium TX1330] gi|257879881|ref|ZP_05659534.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933] gi|257882725|ref|ZP_05662378.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502] gi|257884039|ref|ZP_05663692.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501] gi|257890396|ref|ZP_05670049.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410] gi|257895380|ref|ZP_05675033.1| peptide chain release factor 2 [Enterococcus faecium Com12] gi|257897991|ref|ZP_05677644.1| peptide chain release factor 2 [Enterococcus faecium Com15] gi|260559609|ref|ZP_05831789.1| peptide chain release factor 2 [Enterococcus faecium C68] gi|261208674|ref|ZP_05923111.1| peptide chain release factor 2 [Enterococcus faecium TC 6] gi|289566068|ref|ZP_06446505.1| peptide chain release factor 2 [Enterococcus faecium D344SRF] gi|293378249|ref|ZP_06624418.1| peptide chain release factor 2 [Enterococcus faecium PC4.1] gi|293556398|ref|ZP_06674979.1| peptide chain release factor 2 [Enterococcus faecium E1039] gi|293560376|ref|ZP_06676869.1| peptide chain release factor 2 [Enterococcus faecium E1162] gi|293568705|ref|ZP_06680020.1| peptide chain release factor 2 [Enterococcus faecium E1071] gi|293572408|ref|ZP_06683388.1| peptide chain release factor 2 [Enterococcus faecium E980] gi|294616268|ref|ZP_06696061.1| peptide chain release factor 2 [Enterococcus faecium E1636] gi|294617600|ref|ZP_06697230.1| peptide chain release factor 2 [Enterococcus faecium E1679] gi|294622340|ref|ZP_06701373.1| peptide chain release factor 2 [Enterococcus faecium U0317] gi|314939593|ref|ZP_07846820.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04] gi|314941219|ref|ZP_07848115.1| peptide chain release factor 2 [Enterococcus faecium TX0133C] gi|314948616|ref|ZP_07851991.1| peptide chain release factor 2 [Enterococcus faecium TX0082] gi|314953358|ref|ZP_07856285.1| peptide chain release factor 2 [Enterococcus faecium TX0133A] gi|314993437|ref|ZP_07858802.1| peptide chain release factor 2 [Enterococcus faecium TX0133B] gi|314995786|ref|ZP_07860875.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01] gi|227178781|gb|EEI59753.1| peptide chain release factor 2 [Enterococcus faecium TX1330] gi|257814109|gb|EEV42867.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933] gi|257818383|gb|EEV45711.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502] gi|257819877|gb|EEV47025.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501] gi|257826756|gb|EEV53382.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410] gi|257831945|gb|EEV58366.1| peptide chain release factor 2 [Enterococcus faecium Com12] gi|257835903|gb|EEV60977.1| peptide chain release factor 2 [Enterococcus faecium Com15] gi|260074277|gb|EEW62599.1| peptide chain release factor 2 [Enterococcus faecium C68] gi|260077176|gb|EEW64896.1| peptide chain release factor 2 [Enterococcus faecium TC 6] gi|289162175|gb|EFD10038.1| peptide chain release factor 2 [Enterococcus faecium D344SRF] gi|291588665|gb|EFF20498.1| peptide chain release factor 2 [Enterococcus faecium E1071] gi|291590782|gb|EFF22498.1| peptide chain release factor 2 [Enterococcus faecium E1636] gi|291596206|gb|EFF27469.1| peptide chain release factor 2 [Enterococcus faecium E1679] gi|291598167|gb|EFF29266.1| peptide chain release factor 2 [Enterococcus faecium U0317] gi|291601465|gb|EFF31736.1| peptide chain release factor 2 [Enterococcus faecium E1039] gi|291605664|gb|EFF35105.1| peptide chain release factor 2 [Enterococcus faecium E1162] gi|291607470|gb|EFF36812.1| peptide chain release factor 2 [Enterococcus faecium E980] gi|292643113|gb|EFF61254.1| peptide chain release factor 2 [Enterococcus faecium PC4.1] gi|313590058|gb|EFR68903.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01] gi|313592102|gb|EFR70947.1| peptide chain release factor 2 [Enterococcus faecium TX0133B] gi|313594634|gb|EFR73479.1| peptide chain release factor 2 [Enterococcus faecium TX0133A] gi|313599943|gb|EFR78786.1| peptide chain release factor 2 [Enterococcus faecium TX0133C] gi|313641133|gb|EFS05713.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04] gi|313644947|gb|EFS09527.1| peptide chain release factor 2 [Enterococcus faecium TX0082] Length = 327 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 156/276 (56%), Positives = 202/276 (73%) Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE D ++ +E + + +++ + LL G D N+A +E+H GAGGTESQDW +ML Sbjct: 49 EEPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSML 108 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 LRMYTRWAE+ ++ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+D Sbjct: 109 LRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFD 168 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S RRHTSF S+ V P +D++I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITH+PT Sbjct: 169 SAKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPT 228 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G VV Q +RSQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV Sbjct: 229 GTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVF 288 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 PY MVKD RTN+E + V+DGDLD F+ L + Sbjct: 289 HPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKM 324 >gi|152977397|ref|YP_001376914.1| peptide chain release factor 2 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026149|gb|ABS23919.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98] Length = 327 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 163/317 (51%), Positives = 215/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + + EL EE D + +E ++ Sbjct: 6 FWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDKDLHEELESEVKS 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D ++DTYRASGAGGQHVNTTDSAVRITHIPT +V CQ ERSQ KN+ Sbjct: 186 FNDEVEIEVRTEDLKVDTYRASGAGGQHVNTTDSAVRITHIPTNTIVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|257459323|ref|ZP_05624436.1| peptide chain release factor 2 [Campylobacter gracilis RM3268] gi|257443252|gb|EEV18382.1| peptide chain release factor 2 [Campylobacter gracilis RM3268] Length = 365 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 167/354 (47%), Positives = 232/354 (65%), Gaps = 12/354 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS ++ + G+ +N RL + D +LWQ++ +A + +E+ + N ++ Sbjct: 13 LSIKVENIAGVVKPENIKARLKEIEELENDQNLWQDIAKAGAIGKEKTKISNILNKFLNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAY 118 ++ + D L ELA E+D +ET ++L E+E K + +LSGE D +A Sbjct: 73 KNAVDDAKALYELANSEND----EETINSLFAEADELEDKIINLEISMMLSGENDDKNAI 128 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + +H GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + +++G NAY Sbjct: 129 VSIHPGAGGTESNDWASMLYRMYLRFCEREGFKIEVLDFQEGEEAGLKDVSFIVRGENAY 188 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+LK E G+HRLVR+SP+DS RRHTSFSS+ V P ++D IEI I E D R+D +RASGA Sbjct: 189 GYLKAENGIHRLVRVSPFDSAGRRHTSFSSVMVSPELNDDIEINIEEKDIRVDVFRASGA 248 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIAN 297 GGQH+N T+SAVRITHIPTG+VV CQ +RSQHKNK A +L+++LYELEL K RE+ N Sbjct: 249 GGQHINKTESAVRITHIPTGIVVNCQNDRSQHKNKETAMKVLKSRLYELELMKQREKDEN 308 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L Sbjct: 309 ---APKSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKSIIEGVL 359 >gi|30961857|gb|AAP40012.1| peptide chain release factor-2 [Citrobacter freundii] Length = 293 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 166/280 (59%), Positives = 206/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELDTLEDKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|15602055|ref|NP_245127.1| peptide chain release factor 2 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720411|gb|AAK02274.1| PrfB [Pasteurella multocida subsp. multocida str. Pm70] Length = 320 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 168/317 (52%), Positives = 228/317 (71%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W +A+ L +ER L+ ++ I + L D LLELA+E +D + E L+ Sbjct: 1 MWNEPEKAQALGKERVALEGVVNTIHTLDQGLEDVEGLLELAIEAEDEATFHEAVAELEE 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ +F + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE Sbjct: 61 LEQQLAKLEFRRMFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTEL 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ DG+ AGIKSAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP Sbjct: 121 MEVSDGDVAGIKSATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK Sbjct: 181 IDDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 Q L+AKLYE+ELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 241 QCMKQLKAKLYEMELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 300 TQAVLDGDLDRFIEASL 316 >gi|289450201|ref|YP_003475113.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184748|gb|ADC91173.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 369 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 162/353 (45%), Positives = 227/353 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ L LG + + R+S L +T++P W + +A+ + + L + + + Sbjct: 14 MTEPLKDLGKALYIEPTLDRISELEARTQEPDFWNDQTKAQEVQTKLAGLQRKVDTYRHL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q D L++L EE+D +++ E K + ++LL GE D N+ L +H Sbjct: 74 QKEFDDIDTLIDLGQEENDGAVVAEVQTQFNAFKELFNKLRLQTLLVGEYDRNNVILNIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW ML RMYTRWAE ++ + L+I DG+EAG+KS + I G NAYG+++ Sbjct: 134 AGAGGTEAQDWTEMLYRMYTRWAEDHDYQLKVLDILDGDEAGLKSVSFEIIGENAYGYMR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D++ RRHTSF+S+ V P +D+SI+I I+ D RID YR+SGAGGQH Sbjct: 194 SEMGVHRLVRISPFDASGRRHTSFASVEVLPELDNSIQININPDDLRIDRYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITHIPTGVVV CQ ERSQ +N+ A NML++KL+ L + + + + + Sbjct: 254 VNKTESAIRITHIPTGVVVSCQTERSQIQNRETAMNMLKSKLFALAKAAQMDKVDDLKGN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + +I WG QIRSYV PY MVKD RTN E T V+DGDLD F+ A L+ K Sbjct: 314 QMDIAWGSQIRSYVFCPYTMVKDHRTNYEVTGVDKVMDGDLDGFINAYLSQGK 366 >gi|229823414|ref|ZP_04449483.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271] gi|229787189|gb|EEP23303.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271] Length = 331 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 168/320 (52%), Positives = 227/320 (70%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ ++ + S I +++ + D + LEL E +D IL E + Sbjct: 4 PDFWDDNEKAQKIISQLNLAKETYSTIHALEEGVADIEVALELYDESEDADILAEAEGQV 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +++ +++ + + LLSG D+N+A LE+H GAGGTESQDW +MLLRMY RWA+K+ FK Sbjct: 64 AQVQADLDAYEMKLLLSGPHDANNAILEIHPGAGGTESQDWGSMLLRMYQRWADKQGFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 L+ DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+DSNSRRHTSF+S+ V Sbjct: 124 TVLDYQDGEEAGIKSVTLEIEGHNAYGYLKSEKGVHRLVRISPFDSNSRRHTSFASVEVT 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P++DD+IEI+I+ D RIDTYRASGAGGQH+N T SA+RITHIPTG+V Q Q +RSQ +N Sbjct: 184 PMLDDTIEIDINPDDLRIDTYRASGAGGQHINKTSSAIRITHIPTGIVTQSQSQRSQFQN 243 Query: 273 KAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 + A ML+AKLY+LE + K +E+A + + + +I WG QIRSYV PY MVKD RT+ E Sbjct: 244 RDLAMAMLKAKLYQLEEENKAKELAAL-KGEQKDIAWGSQIRSYVFHPYAMVKDHRTSYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDL+ F+ A L Sbjct: 303 VGNTGAVMDGDLNGFIDAYL 322 >gi|255283235|ref|ZP_05347790.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469] gi|255266308|gb|EET59513.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469] Length = 334 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 162/321 (50%), Positives = 218/321 (67%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W + ++ M+ + L + + ++++ + L+E+A EE+D S++ E + Sbjct: 2 EEPDFWDDPESSQESMKTLKALKDDVETYAVLKEQYEEIETLIEMAYEENDASLILEIQE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L E + +LLSGE D NDA + +HAGAGGTES DWA ML RMYTRWA+K+ + Sbjct: 62 TLDSFIATFENIRIRTLLSGEYDKNDAIVTLHAGAGGTESCDWAGMLYRMYTRWADKKGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+ DGEEAGIKS T ++G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 TVEVLDYLDGEEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ ++IEI E D RIDTYR+SGAGGQH+N T SAVRITH+PT +VVQCQ ERSQ Sbjct: 182 VMPDIEEDLDIEIREEDLRIDTYRSSGAGGQHINKTSSAVRITHLPTNIVVQCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK +A ML+AKLY L+ Q+ E + EIGWG QIRSYV+QPY MVKD RTN Sbjct: 242 QNKDKAMQMLKAKLYLLKQQENAEKVSGIRGEVKEIGWGNQIRSYVMQPYTMVKDHRTNA 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DG++D F+ A L Sbjct: 302 ETGNVDSVMDGNIDLFINAYL 322 >gi|293394608|ref|ZP_06638902.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582] gi|291422917|gb|EFE96152.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582] Length = 248 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 155/245 (63%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+K Sbjct: 1 MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS++VYP VD+ I+I+I+ + Sbjct: 61 SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFVYPEVDEDIDIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QK+ E +K++IGWG QIRSYVL + +KDLRTN+E + VLDGDLD F Sbjct: 181 YEMQKKNADKQALEDNKSDIGWGSQIRSYVLDDSR-IKDLRTNVETRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|283835350|ref|ZP_06355091.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220] gi|291068515|gb|EFE06624.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220] Length = 293 Score = 325 bits (834), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 166/280 (59%), Positives = 206/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELDTLEDKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Q Sbjct: 191 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 289 >gi|156973278|ref|YP_001444185.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116] gi|156524872|gb|ABU69958.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116] Length = 260 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 152/254 (59%), Positives = 196/254 (77%), Gaps = 1/254 (0%) Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 ++E +F + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK+E +E+ Sbjct: 4 KLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEVIEV 63 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP +D+ Sbjct: 64 SEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDE 123 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA Sbjct: 124 NIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAM 183 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LRAKL+ELELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 184 KQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQA 242 Query: 338 VLDGDLDDFMKATL 351 VLDGDLD F+ A+L Sbjct: 243 VLDGDLDKFIGASL 256 >gi|237800110|ref|ZP_04588571.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae str. 1_6] gi|257487126|ref|ZP_05641167.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. tabaci ATCC 11528] gi|320323152|gb|EFW79241.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea str. B076] gi|320329576|gb|EFW85565.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea str. race 4] gi|330867549|gb|EGH02258.1| peptide chain release factor 2 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330872776|gb|EGH06925.1| peptide chain release factor 2 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330878328|gb|EGH12477.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea str. race 4] gi|330894559|gb|EGH27220.1| peptide chain release factor 2 [Pseudomonas syringae pv. mori str. 301020] gi|330959166|gb|EGH59426.1| peptide chain release factor 2 [Pseudomonas syringae pv. maculicola str. ES4326] gi|330964102|gb|EGH64362.1| peptide chain release factor 2 [Pseudomonas syringae pv. actinidiae str. M302091] gi|330985076|gb|EGH83179.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009249|gb|EGH89305.1| peptide chain release factor 2 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331022966|gb|EGI03023.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 248 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 154/245 (62%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK Sbjct: 1 MFSGEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ S Sbjct: 61 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QKR + E +K++IGWG QIRSYVL + +KDLRTNIE++ VLDGD+D++ Sbjct: 181 QEVQKRNAASQALEDTKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEY 239 Query: 347 MKATL 351 + A+L Sbjct: 240 LIASL 244 >gi|320116558|ref|YP_004186717.1| peptide chain release factor 2 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319929649|gb|ADV80334.1| Peptide chain release factor 2 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 368 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 165/345 (47%), Positives = 231/345 (66%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +G D ++ + + ++ K DP W ++ +++ L ++++ L + + + D Sbjct: 19 MGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDL 78 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+EL LEE D SI E + +K ++E + ++LL+G D N+A L +HAG+GGTE Sbjct: 79 STLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTE 138 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMYTRWA + F+ E L+ GEEAGIKS TL+IKGP AYG+LK E GVHR Sbjct: 139 AQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHR 198 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+D+ RRHTSF+ + V P +++ IE+EI D +IDTYRASGAGGQ+VN T+SA Sbjct: 199 LVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESA 258 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + E WG Sbjct: 259 VRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWG 318 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV QPY +VKD RTN E + V+DG++D F+ A L K Sbjct: 319 NQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363 >gi|310644311|ref|YP_003949070.1| protein chain release factor b-like protein [Paenibacillus polymyxa SC2] gi|309249262|gb|ADO58829.1| Protein chain release factor B-like protein [Paenibacillus polymyxa SC2] Length = 339 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 164/323 (50%), Positives = 227/323 (70%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K P W + +A+ ++ E + +++ ++++ D +++ELA EE D +++ E Sbjct: 8 KMAAPDFWDDNEKAQGVIAEMNVVKSSVDSYEQLRQEYEDAGMMVELAEEEGDEALVGEV 67 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++++ + ++E + + LL+ D +A LE+H GAGGTESQDW MLLRMYTRW EKR Sbjct: 68 ENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWGEKR 127 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 128 GFKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 187 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P + D ++IEI D +IDTYRASGAGGQH+NTTDSAVRITH+PTG+VV CQ ERS Sbjct: 188 CDVVPEIADDVDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIVVTCQNERS 247 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ +A MLR+KLYE +++++++ + +++I WG QIRSYV PY MVKD RT Sbjct: 248 QIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRT 307 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 ++E + V+DGDLD F+ L Sbjct: 308 SVETGNVGAVMDGDLDPFIDGYL 330 >gi|189218067|ref|YP_001938709.1| protein chain release factor B [Methylacidiphilum infernorum V4] gi|189184925|gb|ACD82110.1| Protein chain release factor B [Methylacidiphilum infernorum V4] Length = 337 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 173/324 (53%), Positives = 220/324 (67%), Gaps = 2/324 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P WQ +A+ + + L S K + +R D L +L E +D S+ +E + Sbjct: 4 PSFWQTPEKAEKALSRSKELKAKFSDYKTLVNRFKDIEALYDLLQESEDPSLEKELEQEI 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++ + + +LS D +A L VH+GAGGTE+ DWA MLLRMY R+AE+ FK Sbjct: 64 NAYSDLLDSIEVKLVLSDPMDQKNAILSVHSGAGGTEACDWAAMLLRMYQRYAERHGFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 ++I GEEAGIKSA+LLI G AYG+LK E+GVHRLVRISP+++ +R TSF+S+ V Sbjct: 124 SLIDILPGEEAGIKSASLLISGSYAYGYLKAERGVHRLVRISPFNAQGKRQTSFASVDVV 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 VD+SIEIEI ESD RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +N Sbjct: 184 AEVDESIEIEIKESDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVVCQNERSQIQN 243 Query: 273 KAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 KA A +LR++LYELE +KR E+ I K EIGWGRQIRSYVLQPY+MVKDLRT + Sbjct: 244 KATAMKILRSRLYELEKDKKRAEMERI-YGQKGEIGWGRQIRSYVLQPYKMVKDLRTGVT 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 KT +VLDGDLD F+ A L KK Sbjct: 303 KTQVEEVLDGDLDSFIWAYLLGKK 326 >gi|57168993|ref|ZP_00368122.1| peptide chain release factor 2 [Campylobacter coli RM2228] gi|305432246|ref|ZP_07401409.1| peptide chain release factor RF2 [Campylobacter coli JV20] gi|57019659|gb|EAL56348.1| peptide chain release factor 2 [Campylobacter coli RM2228] gi|304444594|gb|EFM37244.1| peptide chain release factor RF2 [Campylobacter coli JV20] Length = 365 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 170/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANAGE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|47567398|ref|ZP_00238111.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47568468|ref|ZP_00239168.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47569292|ref|ZP_00239977.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|222098640|ref|YP_002532698.1| peptide chain release factor 2 [Bacillus cereus Q1] gi|228936472|ref|ZP_04099270.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228988409|ref|ZP_04148500.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229141914|ref|ZP_04270440.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26] gi|229158750|ref|ZP_04286808.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342] gi|47554063|gb|EAL12429.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47554859|gb|EAL13210.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47556019|gb|EAL14357.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|221242699|gb|ACM15409.1| peptide chain release factor [Bacillus cereus Q1] gi|228624734|gb|EEK81503.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342] gi|228641529|gb|EEK97834.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26] gi|228771265|gb|EEM19740.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228823304|gb|EEM69138.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 326 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 166/317 (52%), Positives = 214/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 6 FWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIEI D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|28897286|ref|NP_796891.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD 2210633] gi|153839363|ref|ZP_01992030.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810] gi|308094351|ref|ZP_05888606.2| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034] gi|308095310|ref|ZP_05904925.2| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466] gi|308125643|ref|ZP_05776404.2| peptide chain release factor 2 [Vibrio parahaemolyticus K5030] gi|28805495|dbj|BAC58775.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD 2210633] gi|149747111|gb|EDM58099.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810] gi|308088411|gb|EFO38106.1| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466] gi|308093009|gb|EFO42704.1| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034] gi|308113324|gb|EFO50864.1| peptide chain release factor 2 [Vibrio parahaemolyticus K5030] Length = 260 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 151/249 (60%), Positives = 193/249 (77%), Gaps = 1/249 (0%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+ +GE Sbjct: 9 EFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEVSEGEV 68 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP +D++I I+ Sbjct: 69 AGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIAID 128 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRA Sbjct: 129 INPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRA 188 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 KL+ELELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGD Sbjct: 189 KLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGD 247 Query: 343 LDDFMKATL 351 LD F++A+L Sbjct: 248 LDKFIEASL 256 >gi|228999928|ref|ZP_04159500.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17] gi|229007481|ref|ZP_04165078.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4] gi|228753869|gb|EEM03310.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4] gi|228759870|gb|EEM08844.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17] Length = 326 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 165/317 (52%), Positives = 213/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + +++ + + + EL EE D + +E ++ Sbjct: 5 FWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKS 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK + Sbjct: 65 LVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVDT 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D IEIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 FNDDIEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 244 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ N + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 245 HAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 304 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 305 VQAVMDGEIDPFIDAYL 321 >gi|297583381|ref|YP_003699161.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10] gi|297141838|gb|ADH98595.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10] Length = 366 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 165/349 (47%), Positives = 232/349 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ +L G D D +++ L + DP W N EA+ ++ E L + +E+ Sbjct: 13 MATRLADFRGSLDLDEKEAQIASLEDRMADPSFWDNQEEAQKVIGEANALKSYAHTYREL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D + L EE+D ++ + ++ ++ + + + LLSG D+N+A LE+H Sbjct: 73 EAAHEDLEVQFGLLEEENDPEMMADLEAGIEDLQKRLNQFELQLLLSGPYDANNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQD+A+MLLRMYTR+AE+ +K E L+ G+EAG+KS TL I G NAYG LK Sbjct: 133 PGAGGTESQDYASMLLRMYTRFAEQMNWKVETLDYLPGDEAGVKSVTLQITGHNAYGHLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +++ IEI++ + RIDT+R+SGAGGQH Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCDVMPELNEDIEIDVKPDELRIDTFRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PT +V CQ ERSQ KN+ +A ML+AKL++LE++++ + A+ Sbjct: 253 VNTTDSAVRMTHLPTNTIVSCQSERSQIKNREKAMKMLKAKLFQLEIERQRQEADEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++EIGWG QIRSYV PY MVKD RTN E + V+DGDL F+ A L Sbjct: 313 QSEIGWGSQIRSYVFHPYNMVKDHRTNKETGNTQAVMDGDLMPFIDAYL 361 >gi|242372989|ref|ZP_04818563.1| peptide chain release factor 2 [Staphylococcus epidermidis M23864:W1] gi|242349315|gb|EES40916.1| peptide chain release factor 2 [Staphylococcus epidermidis M23864:W1] Length = 386 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 171/353 (48%), Positives = 235/353 (66%), Gaps = 3/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M + L LGGLFD +N + DP W + +A+ ++ + L + ++ Sbjct: 26 MNIRITLTKLGGLFDLENKETNIQEYEEMMADPGFWDDQNKAQDIIDKNNALKSIVNGYH 85 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ + + D EL EE D + E + + + K +++ + + LL G D+N+A LE Sbjct: 86 DLANEVEDMSATRELLQEEYDEDMKAELEEEVIQFKEKMDQYELQLLLDGPHDANNAILE 145 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTESQDWA+MLLRMY R+ E++ FK E ++ G+EAG+KS TLLIKG NAYG+ Sbjct: 146 LHPGAGGTESQDWASMLLRMYQRYGEQKGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGY 205 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAG 239 LK E+GVHRLVRISP+DS+ RRHTSF+S V P D D IEIEI+ D +DT+RASGAG Sbjct: 206 LKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFDNDEIEIEINPDDITVDTFRASGAG 265 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI 298 GQH+N T+SA+RITH PTG+VV Q ERSQ KN+ A ML++KLY+L+L+++E E+A I Sbjct: 266 GQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEI 325 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY MVKD RTN E V+DG+++ F++A L Sbjct: 326 -RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIEPFIEAYL 377 >gi|257870245|ref|ZP_05649898.1| peptide chain release factor 2 [Enterococcus gallinarum EG2] gi|257804409|gb|EEV33231.1| peptide chain release factor 2 [Enterococcus gallinarum EG2] Length = 329 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 166/323 (51%), Positives = 219/323 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ E ++ + + +LLE+ EE D + E ++ Sbjct: 3 DPTFWDDSEQAQKVINENNANKETYDQFNQLAEEFEELEVLLEMIQEEPDAEMEAELAER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +Q + ++ + LL D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+ ++ Sbjct: 63 IQALNEKMGTYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHGYQ 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 123 VETLDYQAGDEAGIKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D +I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ K Sbjct: 183 MPELDGAIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREQAMGMLKAKLYQLEVEKKEQEAAALRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGDLD F+ A L +K Sbjct: 303 TGNVQAVMDGDLDGFIDAYLKLK 325 >gi|297171212|gb|ADI22220.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF0200_34B24] gi|297171327|gb|ADI22332.1| protein chain release factor B [uncultured actinobacterium HF0500_01C15] Length = 325 Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 156/273 (57%), Positives = 203/273 (74%), Gaps = 10/273 (3%) Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E++ ++LQ++ VE + +++L G+ D +A + +H GAGG ESQDWA ML+ Sbjct: 60 EEELAVLQKS----------VEALELKTMLRGDEDHREAIVTLHPGAGGLESQDWAQMLM 109 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE+R F+ L++ +EAGIKSATL IKG + YG+LK E+GVHRLVRISP+D+ Sbjct: 110 RMYTRWAERRGFQVNVLDLQPAQEAGIKSATLEIKGESVYGYLKAERGVHRLVRISPFDA 169 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 SRRHTSF+S++VYP+V+D IE+EI+E+D RIDTYRASGAGGQHVN TDSAVRITH PT Sbjct: 170 QSRRHTSFTSVFVYPLVEDDIEVEINEADLRIDTYRASGAGGQHVNKTDSAVRITHEPTN 229 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQQERSQHKN++ A MLRA LY+ L+++E+ E SK +IG+G QIRSYV Q Sbjct: 230 IVVSCQQERSQHKNRSTAMKMLRAALYQRALEEKEKEKAAIEESKADIGFGSQIRSYVFQ 289 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY MV D RT + V+DGDLD ++A L Sbjct: 290 PYTMVNDHRTETKIGDVHGVMDGDLDPLIEAYL 322 >gi|228942321|ref|ZP_04104860.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975250|ref|ZP_04135808.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981888|ref|ZP_04142183.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407] gi|228778000|gb|EEM26272.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407] gi|228784529|gb|EEM32550.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817365|gb|EEM63451.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 326 Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 164/317 (51%), Positives = 215/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A++++ E L + + +++ + + + EL EE D + +E ++ Sbjct: 6 FWDDQQGAQVVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKG 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|254229664|ref|ZP_04923074.1| Protein chain release factor B [Vibrio sp. Ex25] gi|151937785|gb|EDN56633.1| Protein chain release factor B [Vibrio sp. Ex25] Length = 248 Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 153/245 (62%), Positives = 192/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ DS+D Y+++ AG+GGTE+QDW NMLLRMY RWAE + FK E +E+ +GE AG+K Sbjct: 1 MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP +D++I+I+I+ S Sbjct: 61 SATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ E +K++IGWG QIRSYVL + +KDLRT IE + VLDGDLD F Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|307723715|ref|YP_003903466.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513] gi|307580776|gb|ADN54175.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513] Length = 368 Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 165/349 (47%), Positives = 233/349 (66%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 ++ +G D ++ + + ++ K DP W ++ +++ L ++++ L + + + Sbjct: 15 EIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSK 74 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 D L+EL LEE D SI E + +K ++E + ++LL+G D N+A L +HAG+ Sbjct: 75 WEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGS 134 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA MLLRMYTRWA + F+ E L+ GEEAGIKS TL+IKGP AYG+LK E Sbjct: 135 GGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEA 194 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+D+ RRHTSF+ + V P +++ IE+EI D +IDTYRASGAGGQ+VN Sbjct: 195 GVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNK 254 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + E Sbjct: 255 TESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHRE 314 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RTN E + V+DG++D F+ A L K Sbjct: 315 AAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363 >gi|269959607|ref|ZP_06173988.1| peptide chain release factor 2 [Vibrio harveyi 1DA3] gi|269835665|gb|EEZ89743.1| peptide chain release factor 2 [Vibrio harveyi 1DA3] Length = 260 Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 152/254 (59%), Positives = 195/254 (76%), Gaps = 1/254 (0%) Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 ++E +F + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+ Sbjct: 4 KLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEV 63 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP +D+ Sbjct: 64 SEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDE 123 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +I I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA Sbjct: 124 NIAIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAM 183 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LRAKL+ELELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 184 KQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQA 242 Query: 338 VLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 243 VLDGDLDKFIEASL 256 >gi|296089769|emb|CBI39588.3| unnamed protein product [Vitis vinifera] Length = 472 Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 159/340 (46%), Positives = 227/340 (66%), Gaps = 1/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W V RL L+ + P LW N + A + RE L + +K ++ L +++ ++ Sbjct: 121 LQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQELLEHIDMV 180 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +LA EE+D + E+ L ++ + K+ E+LL+G+ DS Y+EV AGAGGTES DW Sbjct: 181 KLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAGAGGTESMDW 240 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M+++MY WA++R + ++ GE AGIK AT+ + G ++G+ K E GVHRLVRI Sbjct: 241 AAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRI 300 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D S ++I+ESD RI+ +RA GAGGQHVNTT+SAVRI Sbjct: 301 SPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRI 360 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTGV CQ ERSQH+NKA A +L+++L +LE+ ++ +I S T+I WG QI Sbjct: 361 VHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQI 420 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 421 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 460 >gi|30023221|ref|NP_834852.1| peptide chain release factor 2 [Bacillus cereus ATCC 14579] gi|29898781|gb|AAP12053.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus ATCC 14579] Length = 325 Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 165/317 (52%), Positives = 214/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 5 FWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 65 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 244 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 245 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 304 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 305 VQAVMDGEIDPFIDAYL 321 >gi|68249758|ref|YP_248870.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP] gi|68057957|gb|AAX88210.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP] gi|301169953|emb|CBW29557.1| peptide chain release factor 2 [Haemophilus influenzae 10810] Length = 283 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 161/280 (57%), Positives = 211/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +LELA+E +D E L ++ ++E +F + SGE D+ D Y+++ AG+GGTE+Q Sbjct: 1 MLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLV Sbjct: 61 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 121 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++IGWG Q Sbjct: 181 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 279 >gi|225450605|ref|XP_002277995.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 434 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 159/340 (46%), Positives = 227/340 (66%), Gaps = 1/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W V RL L+ + P LW N + A + RE L + +K ++ L +++ ++ Sbjct: 83 LQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQELLEHIDMV 142 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +LA EE+D + E+ L ++ + K+ E+LL+G+ DS Y+EV AGAGGTES DW Sbjct: 143 KLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAGAGGTESMDW 202 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M+++MY WA++R + ++ GE AGIK AT+ + G ++G+ K E GVHRLVRI Sbjct: 203 AAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRI 262 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D S ++I+ESD RI+ +RA GAGGQHVNTT+SAVRI Sbjct: 263 SPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRI 322 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTGV CQ ERSQH+NKA A +L+++L +LE+ ++ +I S T+I WG QI Sbjct: 323 VHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQI 382 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 383 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 422 >gi|229087663|ref|ZP_04219789.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44] gi|228695624|gb|EEL48483.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44] Length = 327 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 164/317 (51%), Positives = 214/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + + EL EE D + +E ++ Sbjct: 6 FWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKS 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|228993892|ref|ZP_04153795.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442] gi|228765843|gb|EEM14494.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442] Length = 327 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 164/317 (51%), Positives = 213/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + +++ + + + EL EE D + +E ++ Sbjct: 6 FWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKS 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK + Sbjct: 66 LVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVDT 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D IEIE+ D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDDIEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ N + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|49478907|ref|YP_039176.1| peptide chain release factor 2 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140380|ref|YP_086452.1| peptide chain release factor 2 [Bacillus cereus E33L] gi|118480225|ref|YP_897376.1| peptide chain release factor 2 [Bacillus thuringiensis str. Al Hakam] gi|228923910|ref|ZP_04087187.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228930187|ref|ZP_04093196.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228948905|ref|ZP_04111178.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228955423|ref|ZP_04117428.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228961413|ref|ZP_04123027.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229050846|ref|ZP_04194398.1| Peptide chain release factor 2 [Bacillus cereus AH676] gi|229072632|ref|ZP_04205834.1| Peptide chain release factor 2 [Bacillus cereus F65185] gi|229082391|ref|ZP_04214854.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2] gi|229094280|ref|ZP_04225356.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42] gi|229112593|ref|ZP_04242130.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15] gi|229124692|ref|ZP_04253873.1| Peptide chain release factor 2 [Bacillus cereus 95/8201] gi|229130431|ref|ZP_04259388.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4] gi|229147710|ref|ZP_04276053.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24] gi|229153340|ref|ZP_04281518.1| Peptide chain release factor 2 [Bacillus cereus m1550] gi|229181440|ref|ZP_04308768.1| Peptide chain release factor 2 [Bacillus cereus 172560W] gi|229187396|ref|ZP_04314539.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1] gi|229193426|ref|ZP_04320374.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876] gi|229199302|ref|ZP_04325969.1| Peptide chain release factor 2 [Bacillus cereus m1293] gi|296505600|ref|YP_003667300.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171] gi|301056649|ref|YP_003794860.1| peptide chain release factor 2 [Bacillus anthracis CI] gi|49330463|gb|AAT61109.1| peptide chain release factor [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51973849|gb|AAU15399.1| peptide chain release factor 2 (RF-2) [Bacillus cereus E33L] gi|118419450|gb|ABK87869.1| bacterial peptide chain release factor 2 (bRF-2) [Bacillus thuringiensis str. Al Hakam] gi|228584162|gb|EEK42313.1| Peptide chain release factor 2 [Bacillus cereus m1293] gi|228590081|gb|EEK47952.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876] gi|228596100|gb|EEK53777.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1] gi|228602015|gb|EEK59508.1| Peptide chain release factor 2 [Bacillus cereus 172560W] gi|228629944|gb|EEK86595.1| Peptide chain release factor 2 [Bacillus cereus m1550] gi|228635723|gb|EEK92210.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24] gi|228653026|gb|EEL08907.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4] gi|228658787|gb|EEL14446.1| Peptide chain release factor 2 [Bacillus cereus 95/8201] gi|228670973|gb|EEL26280.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15] gi|228689133|gb|EEL42956.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42] gi|228700823|gb|EEL53346.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2] gi|228710608|gb|EEL62581.1| Peptide chain release factor 2 [Bacillus cereus F65185] gi|228722502|gb|EEL73895.1| Peptide chain release factor 2 [Bacillus cereus AH676] gi|228798298|gb|EEM45297.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804215|gb|EEM50829.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228810661|gb|EEM57009.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228829472|gb|EEM75100.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228835709|gb|EEM81073.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326652|gb|ADH09580.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171] gi|300378818|gb|ADK07722.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis str. CI] Length = 326 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 165/317 (52%), Positives = 214/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 6 FWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|188590075|ref|YP_001919915.1| peptide chain release factor 2 [Clostridium botulinum E3 str. Alaska E43] gi|188500356|gb|ACD53492.1| peptide chain release factor 2 [Clostridium botulinum E3 str. Alaska E43] Length = 344 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 164/344 (47%), Positives = 234/344 (68%), Gaps = 3/344 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + ++LS L + ++ W + A+ + +E + + + I ++ +Q +L D +L Sbjct: 3 LFDKEYLEKQLSELEFQMQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVL 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+ +++DD E +N++ I+ E++ E LLSGE D N+A L +H G GGT++ D Sbjct: 63 KEM-MDDDDEESAYEIINNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDAND 121 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W MLLRMYTRW EK+ +K E +++ +G+EAGIKS TL + G AYG+LK E+G+HRLVR Sbjct: 122 WTEMLLRMYTRWCEKKNYKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVR 181 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+S+ V P + +I+I D ++DTYRASGAGGQH+N TDSAVRI Sbjct: 182 ISPFNANGKRQTSFASMEVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRI 241 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQ 311 THIPTGVVVQCQ ERSQ NK A ML+AKL EL E +E+I ++ K ++GWG Q Sbjct: 242 THIPTGVVVQCQNERSQFSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELK-DMGWGSQ 300 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IRSYV PY +VKD RTN+E ++ + V+DGDLD F+ + L K Sbjct: 301 IRSYVFHPYNLVKDHRTNVEVSNVTAVMDGDLDLFINSYLKSSK 344 >gi|222823300|ref|YP_002574873.1| peptide chain release factor 2 [Campylobacter lari RM2100] gi|254790909|sp|B9KEY7|RF2_CAMLR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|222538521|gb|ACM63622.1| peptide chain release factor 2 [Campylobacter lari RM2100] Length = 366 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 170/354 (48%), Positives = 232/354 (65%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL ++ + + + RL + P W +V +A ++ +E+ + N + + Sbjct: 12 KLKNKVGNIASIIKPEEIKARLKEIENLENSPSFWSDVKQAGIIGKEKTKISNLLKNYEN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D L +LA E+D +Q D+ ++ + + LLSGE D +A + + Sbjct: 72 AFNALNDASELFDLANSENDLDTIQALFDDAPNLEDLIVSLEISMLLSGENDGKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+L Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI + D RID YRASGAGGQ Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEDKDIRIDYYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+P+G+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN S Sbjct: 252 HVNKTESAVRITHMPSGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDEAN--SS 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+N + ++LDGD+ ++ L +K Sbjct: 310 EKSEIGWGHQIRSYVLFPYQQVKDTRSNEAFSQVDNILDGDIKKMIEGVLIAQK 363 >gi|283955061|ref|ZP_06372564.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 414] gi|283793428|gb|EFC32194.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 414] Length = 366 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 170/349 (48%), Positives = 232/349 (66%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ +++ +++ + + LLSGE DS +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDVPKLEDTITSLEISMLLSGENDSKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELLKQQDNANAGE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|75759027|ref|ZP_00739135.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228903659|ref|ZP_04067779.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222] gi|228911012|ref|ZP_04074820.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200] gi|228968278|ref|ZP_04129276.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|74493493|gb|EAO56601.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228791451|gb|EEM39055.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228848667|gb|EEM93513.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200] gi|228855927|gb|EEN00467.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222] Length = 326 Score = 325 bits (832), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 164/317 (51%), Positives = 214/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + + EL EE D + +E ++ Sbjct: 6 FWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKG 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|85059968|ref|YP_455670.1| peptide chain release factor RF-2 [Sodalis glossinidius str. 'morsitans'] gi|84780488|dbj|BAE75265.1| peptide chain release factor RF-2 [Sodalis glossinidius str. 'morsitans'] Length = 289 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 166/282 (58%), Positives = 207/282 (73%), Gaps = 1/282 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+ EDD ET L ++ ++ +F + SGE DS D Y+++ AG+GGTE+Q Sbjct: 7 LLELAVGEDDEETFLETQAELDGLEAKLGQLEFRRMFSGEYDSADCYVDIQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE R FKTE +E +GE AGIKS T+ + G AYGWL+ E GVHRLV Sbjct: 67 DWASMLLRMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKVIGDYAYGWLRTETGVHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 127 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT +V QCQ +RSQHKNK QA L+AKLYE ELQK+ E +K++IGWG Q Sbjct: 187 ITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFELQKKNAEKKALEDTKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYVL + +KDLRT +E + VLDGDLD F++A+L + Sbjct: 247 IRSYVLDDSR-IKDLRTGVETRNAQSVLDGDLDKFIEASLKV 287 >gi|147834602|emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera] Length = 426 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 159/340 (46%), Positives = 227/340 (66%), Gaps = 1/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W V RL L+ + P LW N + A + RE L + +K ++ L +++ ++ Sbjct: 75 LQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQELLEHIDMV 134 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +LA EE+D + E+ L ++ + K+ E+LL+G+ DS Y+EV AGAGGTES DW Sbjct: 135 KLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAGAGGTESMDW 194 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M+++MY WA++R + ++ GE AGIK AT+ + G ++G+ K E GVHRLVRI Sbjct: 195 AAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRI 254 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D S ++I+ESD RI+ +RA GAGGQHVNTT+SAVRI Sbjct: 255 SPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQHVNTTESAVRI 314 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTGV CQ ERSQH+NKA A +L+++L +LE+ ++ +I S T+I WG QI Sbjct: 315 VHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQI 374 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 375 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 414 >gi|254513973|ref|ZP_05126034.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3] gi|219676216|gb|EED32581.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3] Length = 280 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 152/277 (54%), Positives = 206/277 (74%), Gaps = 1/277 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EE+D + + + +Q + +E +F + +GE D+N+A+L++ +G+GGTE+QDWA Sbjct: 1 MASEENDEAAVSDLELEIQGLLKVLELLEFRRMFNGEMDANNAFLDIQSGSGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RW E R F TE +E G+ AGIKSAT+ G A+GWL+ E GVHRLVR S Sbjct: 61 EMLLRMYLRWGESRGFTTELIEASGGDVAGIKSATIKFSGEYAFGWLRTETGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS +RRHTSF+S++V P +DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH Sbjct: 121 PFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 P+G+VVQCQ ERSQH+N+ A +LR KLYE+E+ KR + E +K +IGWG QIRS Sbjct: 181 NPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEVLKRNAEKQVMEDNKADIGWGSQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL + +KDLRTN+E ++ VLDG +D F++A+L Sbjct: 241 YVLDASR-IKDLRTNVETSNTQAVLDGAIDQFIEASL 276 >gi|149192200|ref|ZP_01870417.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii AK1] gi|148833958|gb|EDL50978.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii AK1] Length = 248 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D++D Y+++ +G+GGTE+QDW NM+LRMY RWAE + FKTE +E+ +GE AG+K Sbjct: 1 MFSGDHDASDCYIDLQSGSGGTEAQDWTNMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP +DD+I+I+I+ S Sbjct: 61 GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIQIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 FELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|167622749|ref|YP_001673043.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4] gi|167352771|gb|ABZ75384.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4] Length = 293 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 154/280 (55%), Positives = 205/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+EEDD + + LQ ++ +E +F + SG D++D YL++ +G+GGTE+Q Sbjct: 11 LLELAVEEDDEETFNDAAAELQDLERRLEELEFRRMFSGPHDASDCYLDIQSGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWANM+LRM+ RW + +K E +E+ G+ AGIK AT+ G A+G L+ E GVHRLV Sbjct: 71 DWANMVLRMFLRWGDAHDYKPELIEVTGGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+R Sbjct: 131 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAIR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E +K++IGWG Q Sbjct: 191 ITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDAKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 251 IRSYVLDDAR-IKDLRTGVENRNTQSVLDGDLDKFIEASL 289 >gi|329124057|ref|ZP_08252604.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116] gi|327467482|gb|EGF12980.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116] Length = 283 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 160/280 (57%), Positives = 212/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +LELA+E +D E L ++ ++E +F + SGE D+ + Y+++ AG+GGTE+Q Sbjct: 1 MLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACNCYVDLQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLV Sbjct: 61 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 121 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ + E +K++IGWG Q Sbjct: 181 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQVMEDNKSDIGWGSQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 279 >gi|251792904|ref|YP_003007630.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus NJ8700] gi|247534297|gb|ACS97543.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus NJ8700] Length = 289 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 161/280 (57%), Positives = 211/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E +D + E L ++ ++ +F + SGE D+ D Y+++ AG+GGTE+Q Sbjct: 7 LLELAVEAEDEATFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLV Sbjct: 67 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTETGIHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 127 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++IGWG Q Sbjct: 187 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 247 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 285 >gi|88860263|ref|ZP_01134901.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata D2] gi|88817461|gb|EAR27278.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata D2] Length = 260 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 155/254 (61%), Positives = 195/254 (76%), Gaps = 1/254 (0%) Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 ++E +F + SG+ D NDAYL++ +G+GGTE+QDW N+LLRMY RWA+ + FK E +E Sbjct: 4 KLEKLEFRRMFSGDFDQNDAYLDLQSGSGGTEAQDWCNILLRMYLRWADAKGFKAELVEA 63 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 DG+ AGIK AT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S +VYP +DD Sbjct: 64 TDGDVAGIKGATVRIVGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEIDD 123 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ ERSQHKNK QA Sbjct: 124 NIKIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNERSQHKNKDQAM 183 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 L+AKL+ELELQK+ E +K++IGWG QIRSYVL + +KDLRT IE + Sbjct: 184 KQLKAKLFELELQKQNAEKQTQEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQA 242 Query: 338 VLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 243 VLDGDLDKFIEASL 256 >gi|291547275|emb|CBL20383.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp. SR1/5] Length = 332 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 159/321 (49%), Positives = 217/321 (67%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P W N ++M M++ + L + I ++ ++ D ++E+ EE+D I+ E + Sbjct: 2 EAPDFWDNAEASQMKMKQLKSLKDDIETYHNLETQMEDMETMIEMGYEENDPEIVPEIQE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + + + ++LLSGE D +A ++++AGAGGTE+ DW ML RMY+RWAEK+ F Sbjct: 62 MLDEFQASFDSIRVKTLLSGEYDGENAIIKLNAGAGGTEACDWCGMLYRMYSRWAEKKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+ DG+EAG+KS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 ALEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH Sbjct: 182 VMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK +A ML+AKLY L+ Q+ EE + T+IGWG QIRSYVLQPY MVKD RTN Sbjct: 242 MNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVLQPYTMVKDHRTNE 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDG +D F+ A L Sbjct: 302 ETGNVDAVLDGGIDIFINAYL 322 >gi|325291337|ref|YP_004267518.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus glycolicus DSM 8271] gi|324966738|gb|ADY57517.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus glycolicus DSM 8271] Length = 371 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 219/319 (68%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A+ +M+E + ++ E++ D +L ++A+EEDD S+ E ++ Sbjct: 42 PDFWDDRSNAQKIMQELTGNKDKVALFGELKTETEDLEVLWQMAMEEDDSSLEDEIVKDI 101 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 RI+ + + + E LLSGE D N+A + +H+GAGGTE+QDW ML RMY RW E+R++K Sbjct: 102 HRIRAQYDELELEILLSGEYDRNNAIITLHSGAGGTEAQDWVQMLYRMYLRWGERRRYKV 161 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L++ GEEAGIKS T + G NA+G+ K E+GVHRLVRISP+DS+ RRHTSF+S+ V Sbjct: 162 ETLDLLPGEEAGIKSVTFSLAGENAFGYAKCEKGVHRLVRISPFDSSGRRHTSFASVDVI 221 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P V++ +EI I D ++DTYR+ GAGGQHVN TDSAVRITHIP+G++VQCQ ERSQ +N Sbjct: 222 PEVNEDMEINIDSEDLKVDTYRSGGAGGQHVNKTDSAVRITHIPSGIIVQCQSERSQIQN 281 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 +A +L+AKL EL+ +++EE +I WG QIRSYV PY MVKD RTN E Sbjct: 282 RAYCMRILQAKLLELKRKQQEEELLEIRGELNDIAWGSQIRSYVFHPYSMVKDHRTNTET 341 Query: 333 TSPSDVLDGDLDDFMKATL 351 + + V+DG++D F+ A L Sbjct: 342 GNVNSVMDGEIDLFISAYL 360 >gi|308126586|ref|ZP_05911115.2| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037] gi|308107642|gb|EFO45182.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037] Length = 260 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 150/249 (60%), Positives = 193/249 (77%), Gaps = 1/249 (0%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F + SG+ D++D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+ +GE Sbjct: 9 EFRRMFSGDHDNSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEVSEGEV 68 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP +D++I I+ Sbjct: 69 AGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIAID 128 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRA Sbjct: 129 INPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRA 188 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 KL+ELELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGD Sbjct: 189 KLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGD 247 Query: 343 LDDFMKATL 351 LD F++A+L Sbjct: 248 LDKFIEASL 256 >gi|229164123|ref|ZP_04292059.1| Peptide chain release factor 2 [Bacillus cereus R309803] gi|228619359|gb|EEK76249.1| Peptide chain release factor 2 [Bacillus cereus R309803] Length = 326 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 165/317 (52%), Positives = 214/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A++++ E L + +++ + + I EL EE D + +E ++ Sbjct: 6 FWDDQQGAQVVINEANALKEMVGKFRKLDETFENLEITHELLKEEYDEDLHEELEAEVKG 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIEI D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|330836506|ref|YP_004411147.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta coccoides DSM 17374] gi|329748409|gb|AEC01765.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta coccoides DSM 17374] Length = 369 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 162/326 (49%), Positives = 218/326 (66%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L KT P W + +A+ + L ++ ++++ R+ D L++L EDD S++ Sbjct: 35 LEAKTTLPDFWNDKEKAEKTFSDLSSLKDSFFPWRDLKKRIDDVGDLIDLYANEDDESLV 94 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 QE + I+ E + ++LLS D ND +L +HAGAGGTE+ DWA ML+RMY RW Sbjct: 95 QELDSQILDIEKEFHPLKVKTLLSQRFDKNDCFLSIHAGAGGTEASDWAAMLMRMYLRWC 154 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ FK+E L++ + +E GIKS T+ + G A+G+LKGE GVHRLVRISP+DS RRHTS Sbjct: 155 ERNGFKSEILDMQE-DEGGIKSTTIRVSGQYAFGYLKGEAGVHRLVRISPFDSQKRRHTS 213 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S++ PV+DD IEI+I D R+DTYRA GAGGQHVN TDSAVRITH +G+VVQCQ Sbjct: 214 FTSVYASPVIDDEIEIDIKPEDIRLDTYRAGGAGGQHVNKTDSAVRITHFESGIVVQCQN 273 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ NK A+ MLR++LYE +K+E+ +K I WG QIRSYV QPY MVKD Sbjct: 274 ERSQFMNKEVAFKMLRSRLYEYYKEKQEQEHQKTAIAKKGITWGSQIRSYVFQPYTMVKD 333 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RTN + + V+DGD+DDF++ L Sbjct: 334 HRTNCQVGNIQAVMDGDIDDFIEQFL 359 >gi|157738274|ref|YP_001490958.1| peptide chain release factor 2 [Arcobacter butzleri RM4018] gi|315636563|ref|ZP_07891799.1| peptide chain release factor RF2 [Arcobacter butzleri JV22] gi|166977372|sp|A8EWG5|RF2_ARCB4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157700128|gb|ABV68288.1| peptide chain release factor 2 [Arcobacter butzleri RM4018] gi|315479212|gb|EFU69909.1| peptide chain release factor RF2 [Arcobacter butzleri JV22] Length = 365 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 162/342 (47%), Positives = 224/342 (65%), Gaps = 2/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + G+ D +RL + + W +V A + E+ + ++ + D L Sbjct: 20 IKGILKPDILNKRLEEIKNEEASQDFWNDVENATKIGIEKNRILGKLNKFNKAFDSLTGT 79 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A E D L+ + ++ ++ + +LS DS++A + +H GAGGTE Sbjct: 80 NELYEMATAEKDDETLEMLYEEASDLENLIKSTEISVMLSNPDDSSNAIVSIHPGAGGTE 139 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWA++L RMY RWAE+ FK E L+ G+EAGIK + +IKG NAYG++K E G+HR Sbjct: 140 SQDWASILYRMYLRWAERNDFKVELLDYQAGDEAGIKDVSFIIKGENAYGYMKAENGIHR 199 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DSN++RHTSFSS+ V P +DD+I I I + D RIDTYRASGAGGQHVN T+SA Sbjct: 200 LVRISPFDSNAKRHTSFSSVMVSPEIDDNINIVIEDKDIRIDTYRASGAGGQHVNKTESA 259 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITHIPTG+VVQCQ +RSQHKNK A+ ML+++LYE EL+K+ A+ K++ GWG Sbjct: 260 IRITHIPTGIVVQCQNDRSQHKNKDSAFKMLKSRLYEYELEKQR--ASKDGIEKSDNGWG 317 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVLQPYQ VKD R+NI ++ +LDGD+ ++ L Sbjct: 318 HQIRSYVLQPYQQVKDSRSNIGYSNVDAILDGDITKMIEDVL 359 >gi|86152591|ref|ZP_01070796.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843476|gb|EAQ60686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 365 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASGLFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|229020397|ref|ZP_04177152.1| Peptide chain release factor 2 [Bacillus cereus AH1273] gi|229026626|ref|ZP_04182968.1| Peptide chain release factor 2 [Bacillus cereus AH1272] gi|228734659|gb|EEL85311.1| Peptide chain release factor 2 [Bacillus cereus AH1272] gi|228740876|gb|EEL91119.1| Peptide chain release factor 2 [Bacillus cereus AH1273] Length = 326 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 163/317 (51%), Positives = 214/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + + EL EE D + +E ++ Sbjct: 6 FWDDQQGAQTVINEANALKDMVGSFRQLDETFENLEMTHELLKEEYDEDLHEELESEVKT 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|49188023|ref|YP_031276.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne] gi|49181950|gb|AAT57326.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne] Length = 326 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 165/317 (52%), Positives = 213/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 6 FWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|242279065|ref|YP_002991194.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638] gi|242121959|gb|ACS79655.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638] Length = 372 Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 162/344 (47%), Positives = 226/344 (65%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + +N GG+FD + +RL + P W ++RE+ L+ ++ + Sbjct: 16 QNMNPSGGVFDHAQSKERLEEIEHDLSKPGAWDKPDALTPVLREKSMLEEKVTSYDNLTS 75 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 D L +A E+ D IL+ S+N++++ VE + +LLSG D + A LE+H G Sbjct: 76 SKDDVEEWLMMASEDQDQEILEALSENVEKLAKLVEQTELAALLSGPEDKSTAILEIHPG 135 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG ESQDWA MLLRMY RWA+KR +KT L+ +EAGIKS TL I+G AYG+LKGE Sbjct: 136 AGGIESQDWAEMLLRMYLRWADKRNWKTSYLDYQPDDEAGIKSVTLRIEGLYAYGFLKGE 195 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G+HRL+RISP+D++ RRHTSF+S+ VYP + IEIE+ + D R+D +RASG GGQHVN Sbjct: 196 AGIHRLIRISPFDASGRRHTSFASVDVYPEISQDIEIEVKDEDIRLDVFRASGPGGQHVN 255 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVRITH+PT +VVQCQ E+SQ KNK A +L+++LYE EL+++EE ++K Sbjct: 256 KTNSAVRITHLPTNIVVQCQNEKSQLKNKETAMKVLKSRLYEQELKRQEESKRADYATKD 315 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IG+G QIR+Y LQPY++VKD R E + VLDG+LD ++ Sbjct: 316 SIGFGSQIRTYTLQPYRLVKDHRCGAEDGNVEAVLDGELDGLIR 359 >gi|311070034|ref|YP_003974957.1| peptide chain release factor 2 [Bacillus atrophaeus 1942] gi|310870551|gb|ADP34026.1| peptide chain release factor 2 [Bacillus atrophaeus 1942] Length = 327 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 165/323 (51%), Positives = 219/323 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 3 DPEFWNDQQKAQTVINEANGLKDYVNSYKKLSESHEELQMTHDLLKEEPDEELQLELVKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R FK Sbjct: 63 LKTLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG++K E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYIKAEKGVHRLVRISPFDSSGRRHTSFVSCDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P ++ I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K Sbjct: 183 MPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML++KLY+ +++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 243 NRDRAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGD+D F+ A L K Sbjct: 303 MGNVQAVMDGDIDVFIDAYLRSK 325 >gi|229099612|ref|ZP_04230540.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29] gi|229105789|ref|ZP_04236418.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28] gi|229118678|ref|ZP_04248030.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3] gi|228664870|gb|EEL20360.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3] gi|228677678|gb|EEL31926.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28] gi|228683908|gb|EEL37858.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29] Length = 326 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 163/317 (51%), Positives = 214/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + + EL EE D + +E ++ Sbjct: 6 FWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVKG 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 306 VQAVMDGEIDPFIDAYL 322 >gi|65317159|ref|ZP_00390118.1| COG1186: Protein chain release factor B [Bacillus anthracis str. A2012] Length = 325 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 165/317 (52%), Positives = 213/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 5 FWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 65 LIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNRE 244 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 245 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 304 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 305 VQAVMDGEIDPFIDAYL 321 >gi|301064303|ref|ZP_07204737.1| peptide chain release factor 2 [delta proteobacterium NaphS2] gi|300441582|gb|EFK05913.1| peptide chain release factor 2 [delta proteobacterium NaphS2] Length = 326 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 158/321 (49%), Positives = 217/321 (67%), Gaps = 1/321 (0%) Query: 35 LWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 WQ + E L +ER L I +++ + D +L E+ALEE D + L E + +++ Sbjct: 6 FWQRDQEEISRLNQERSALSEQIDTWEDLFRKTEDAALLAEMALEEKDKTTLSEVTRDVE 65 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 R++ E++ + SLL D +A + ++AGAGGTE+QDW ML RMYTRWAE + K E Sbjct: 66 RLEREIKRLELRSLLGKPDDRRNAIVAINAGAGGTEAQDWVEMLFRMYTRWAEAKGMKVE 125 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIK+ + GP AYG+LK E G+HR+VRISP+D+ RRHTSF+S+ V P Sbjct: 126 VIDFLAGDEAGIKNVDFTVTGPYAYGYLKSEHGIHRMVRISPFDATGRRHTSFASVSVLP 185 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 VD I IE+ E+D RIDTYRASG GGQHVN T SA+RITH+PT +VVQCQ E+SQH+NK Sbjct: 186 EVDLDINIEVDENDLRIDTYRASGPGGQHVNKTSSAIRITHLPTKIVVQCQNEKSQHRNK 245 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A +L++KLYELE K E+ ++ +I WG QIRSYV PY+MVKD RTN++ Sbjct: 246 DMAMKVLKSKLYELEKNKLEQKKQEIHDTQKDIAWGSQIRSYVFNPYRMVKDHRTNLDDG 305 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DGD+D+F+ A L +K Sbjct: 306 NVDKVMDGDIDEFIDAYLRMK 326 >gi|315187113|gb|EFU20870.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta thermophila DSM 6578] Length = 364 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 174/357 (48%), Positives = 238/357 (66%), Gaps = 14/357 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK----MLMRERQHLDNAISF 58 + R+ GG+F+ + +++S L +T P LW + A+ L R + + S Sbjct: 1 MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADS 114 ++E++D L +LA EE+D S +E + Q++ E E K + LL+ E D Sbjct: 61 VQEVEDIHT----LYDLAAEENDPSQEEEEEELRQQLA-EAERKFRELRLRELLNEEYDQ 115 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 DAYL +HAGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG Sbjct: 116 KDAYLTIHAGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKG 174 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 A+G+LKGE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I D RIDTYR Sbjct: 175 DYAFGYLKGEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYR 234 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 + GAGGQHVN T+SAVRITH+PTG+VVQCQ ERSQHKN+ A MLR++LYE Q REE Sbjct: 235 SQGAGGQHVNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREE 294 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV QPY MVKDLRT +E + V+DGDLD F++A L Sbjct: 295 EQEKKAIEKKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYL 351 >gi|283956828|ref|ZP_06374302.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 1336] gi|283791689|gb|EFC30484.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 1336] Length = 365 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIKTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|161524328|ref|YP_001579340.1| peptide chain release factor 2 [Burkholderia multivorans ATCC 17616] gi|189350916|ref|YP_001946544.1| peptide chain release factor 2 [Burkholderia multivorans ATCC 17616] gi|160341757|gb|ABX14843.1| peptide chain release factor 2 [Burkholderia multivorans ATCC 17616] gi|189334938|dbj|BAG44008.1| peptide chain release factor 2 [Burkholderia multivorans ATCC 17616] Length = 248 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 197/245 (80%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ + Sbjct: 61 NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL+KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATL 351 + A+L Sbjct: 240 ISASL 244 >gi|121612135|ref|YP_001001104.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81-176] gi|167005998|ref|ZP_02271756.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81-176] gi|166223626|sp|A1W163|RF2_CAMJJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|87249819|gb|EAQ72778.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81-176] Length = 365 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDANELFDLANSENDTETLEALFNDASKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|229175857|ref|ZP_04303355.1| Peptide chain release factor 2 [Bacillus cereus MM3] gi|228607590|gb|EEK64914.1| Peptide chain release factor 2 [Bacillus cereus MM3] Length = 325 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 164/317 (51%), Positives = 213/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + +++ + + I EL EE D + +E ++ Sbjct: 5 FWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 65 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIEI D ++DTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 FNDEVEIEIRSEDLKVDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 244 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 245 HAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 304 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG++D F+ A L Sbjct: 305 VQAVMDGEIDPFIDAYL 321 >gi|57238478|ref|YP_179609.1| peptide chain release factor 2 [Campylobacter jejuni RM1221] gi|73621535|sp|Q5HSX6|RF2_CAMJR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|57167282|gb|AAW36061.1| peptide chain release factor 2 [Campylobacter jejuni RM1221] gi|315058910|gb|ADT73239.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni S3] Length = 365 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|86149455|ref|ZP_01067686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151896|ref|ZP_01070109.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 260.94] gi|88596537|ref|ZP_01099774.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 84-25] gi|148925627|ref|ZP_01809315.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8486] gi|205356111|ref|ZP_03222878.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8421] gi|218563058|ref|YP_002344837.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315124892|ref|YP_004066896.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|24638160|sp|Q9PMK5|RF2_CAMJE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|85840237|gb|EAQ57495.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841004|gb|EAQ58253.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 260.94] gi|88191378|gb|EAQ95350.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360764|emb|CAL35563.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845637|gb|EDK22728.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8486] gi|205345954|gb|EDZ32590.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8421] gi|284926663|gb|ADC29015.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni IA3902] gi|315018614|gb|ADT66707.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315927400|gb|EFV06738.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930833|gb|EFV09825.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 305] Length = 365 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANTGE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|157415680|ref|YP_001482936.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81116] gi|172047182|sp|A8FNC2|RF2_CAMJ8 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157386644|gb|ABV52959.1| peptide chain release factor RF-2 [Campylobacter jejuni subsp. jejuni 81116] gi|307748321|gb|ADN91591.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni M1] gi|315930963|gb|EFV09938.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 327] Length = 365 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 169/349 (48%), Positives = 230/349 (65%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN GE Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANAGE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|81428109|ref|YP_395108.1| peptide chain release factor 2 [Lactobacillus sakei subsp. sakei 23K] gi|78609750|emb|CAI54796.1| Peptide chain release factor 2 [Lactobacillus sakei subsp. sakei 23K] Length = 332 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 162/320 (50%), Positives = 212/320 (66%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + A+ L+ + L ++Q + + + LEL EE D + + Sbjct: 3 DPDFWNDQQSAQQLIDQNNVLKEKYDSFNQLQAQFEELSVTLELLQEEPDDELQASFEAD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L++I+ ++ + LLSGE DSN+A +E+H GAGGTESQDW MLLRMY RWA+ F Sbjct: 63 LEQIQSQMRQYELGQLLSGEYDSNNAIVELHPGAGGTESQDWGAMLLRMYLRWADAHGFT 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GEEAGIKS TL+IKG NAYG L+ E+GVHRLVRISP+DS RRHTSF S+ V Sbjct: 123 VETEDYQAGEEAGIKSVTLMIKGHNAYGLLRSEKGVHRLVRISPFDSAGRRHTSFCSVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D SI+IE+ D R+D +R+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ + Sbjct: 183 MPELDGSIDIEVRTEDLRVDVFRSSGAGGQHINKTSSAVRLTHLPTGIVVSSQAQRSQLQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A NML+AKLY+ E +++ + A + + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NRETAMNMLKAKLYQKEQEEQAKKAAAIKGEQLEIGWGSQIRSYVFHPYTMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDLD FM A L Sbjct: 303 TGNGQAVMDGDLDPFMYAYL 322 >gi|254429259|ref|ZP_05042966.1| peptide chain release factor 2 [Alcanivorax sp. DG881] gi|196195428|gb|EDX90387.1| peptide chain release factor 2 [Alcanivorax sp. DG881] Length = 356 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 170/349 (48%), Positives = 234/349 (67%), Gaps = 8/349 (2%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL+ + + E+P +W + A+ L +ER L+ ++ I + + D Sbjct: 5 LGGIFDYDQKSERLTEVERELENPDVWNDPDYARALGKERAQLEMVVNTINDASQGVEDT 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL+L +EE D L E +L+ ++ V +F + SG+ D+ AYL++ AG+GGTE Sbjct: 65 SALLDLVVEEGDEDTLTEVESDLRDLEKMVADLEFRRMFSGQMDACSAYLDIQAGSGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW M+LRMY RW E FKTE +E G+ AGIKSAT+ +G AYGWL+ E GVHR Sbjct: 125 AQDWGEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATIRFEGEYAYGWLRTETGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS++V P VDD I+++I R+DTYRASGAGGQHVN TDSA Sbjct: 185 LVRKSPFDSGGRRHTSFSSVFVSPEVDDDIDVDIDVGSMRVDTYRASGAGGQHVNRTDSA 244 Query: 250 VRITHIPTG-------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VR+T+ T +V QCQ RSQH+NK QA M++AK+YE+E+Q+R + ES+ Sbjct: 245 VRLTYEYTDEGGEKHTLVTQCQSGRSQHQNKDQALKMMQAKVYEVEMQRRNAEKQVQESN 304 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 305 KSDIGWGSQIRSYVLDDGR-IKDLRTGVESHNTQQVLDGALDQFIEASL 352 >gi|320535245|ref|ZP_08035369.1| peptide chain release factor 2 [Treponema phagedenis F0421] gi|320147898|gb|EFW39390.1| peptide chain release factor 2 [Treponema phagedenis F0421] Length = 320 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 160/306 (52%), Positives = 212/306 (69%), Gaps = 1/306 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M E + L + + +E+Q + D L +LA E +D + E Q++ E Sbjct: 1 MSELKVLRSRVEPWRELQTDIEDLQALYDLAEEAEDEQMTDEIDSVYQKLSERFEKLNVL 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGE D+NDA+L +HAGAGGTE+ DWA ML RMY RWAE+ +KTE L++ + + GI Sbjct: 61 HLLSGEVDANDAFLTIHAGAGGTEACDWAQMLTRMYLRWAERNDYKTETLDMLEAD-GGI 119 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS TL + G A+G+LKGE G+HRLVRISP+DSN+RRHTSF+S++V+PV+DD+IE+EI Sbjct: 120 KSITLKVSGEYAFGFLKGENGIHRLVRISPFDSNARRHTSFTSVYVFPVLDDTIEVEIRP 179 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R+DTYRA GAGGQHVN TDSAVR+TH+PTG+VV CQ ERSQ N+A A +L+A+LY Sbjct: 180 EDLRVDTYRAGGAGGQHVNKTDSAVRLTHLPTGIVVACQNERSQISNRATAMAILKARLY 239 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E +++E+ + K +I WG QIRSYV QPY MVKD RT E + V+DGD+D Sbjct: 240 EYYREEKEKDNQKFAAEKKDISWGNQIRSYVFQPYTMVKDHRTKYETGNIQAVMDGDIDG 299 Query: 346 FMKATL 351 FM+ L Sbjct: 300 FMEEYL 305 >gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548] gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus prevotii DSM 20548] Length = 367 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 165/355 (46%), Positives = 238/355 (67%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++L +G D + + + L ++ P W + +A+ +M + + +S K++ Sbjct: 14 LSQKLKLIGDSLDPASLEKEIKELEKQSASPDFWNDSDKAQKIMADLASKKDELSDYKKL 73 Query: 63 QDRLCDNLILLELA--LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L DN +L+L EE + ++E D+L+ + + + L GE D N+AY+ Sbjct: 74 ENGLVDNTDMLDLVEMSEEKETDTIEEVEDSLKNLAKLATQMKLRTQLDGEYDKNNAYIS 133 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGG E+ DWA+ML RMY R+ + FK E ++++ E GIKSAT+ + GP AYG+ Sbjct: 134 INAGAGGLEATDWADMLFRMYKRYFDSIGFKYEIKDLNNEEAGGIKSATMHVTGPYAYGY 193 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E+GVHRLVRISP+DS SRRHTSF+S+ V+P +D++IE++I SD RIDTYRASGAGG Sbjct: 194 LKAEKGVHRLVRISPFDSQSRRHTSFASVDVFPELDENIELDIDPSDLRIDTYRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIG 299 QHVN TDSAVRITHIPTGVV Q ERSQ +N+ A N+L++KL ++ E ++RE+I +I Sbjct: 254 QHVNKTDSAVRITHIPTGVVATSQAERSQIQNRQTAMNLLKSKLVQIKEEEQREKIEDI- 312 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + S ++I WG QIRSYV QPY +VKD RT E + V+DGD+ F+ A LA K Sbjct: 313 QGSYSQIAWGSQIRSYVFQPYTLVKDHRTGFEMGNVEAVMDGDIQGFIDAFLADK 367 >gi|308071079|ref|YP_003872684.1| peptide chain release factor 2 [Paenibacillus polymyxa E681] gi|305860358|gb|ADM72146.1| Peptide chain release factor 2 (RF-2) [Paenibacillus polymyxa E681] Length = 331 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 162/319 (50%), Positives = 224/319 (70%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ ++ E + +++ ++++ D ++ ELA EE D ++ E +++ Sbjct: 4 PDFWDDNDKAQAVIAEMNAVKSSVDSYEQLRLEYEDAGMMAELADEEGDETLAGEIENSI 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + +++ + + LL+ D +A LE+H GAGGTESQDW MLLRMYTRWAEKR FK Sbjct: 64 RSLLSKLQEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWAEKRGFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 124 ETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVV 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P + D +++EI D +IDTYRASGAGGQH+NTTDSAVRITH+P+G+VV CQ ERSQ KN Sbjct: 184 PEIADDVDVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPSGIVVTCQNERSQIKN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + QA MLR+KLYE +++++ + + +++I WG QIRSYV PY MVKD RT++E Sbjct: 244 REQAMTMLRSKLYERKIEEQRQQLDEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTSVET 303 Query: 333 TSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ L Sbjct: 304 GNVGAVMDGDLDPFIDGYL 322 >gi|282908140|ref|ZP_06315971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910399|ref|ZP_06318203.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282325791|gb|EFB56099.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282327805|gb|EFB58087.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WW2703/97] Length = 352 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 169/344 (49%), Positives = 228/344 (66%), Gaps = 3/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD +N + +P+ W N +A+ ++ + L ++ K +Q + D Sbjct: 3 LGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDM 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +L EE D + ++ + K +V+ + + LL G D+N+A LE+H GAGGTE Sbjct: 63 DATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHR Sbjct: 123 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 LVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH+N T+S Sbjct: 183 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307 A+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ E+A I + EIG Sbjct: 243 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIG 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 345 >gi|83589099|ref|YP_429108.1| peptide chain release factor 2 [Moorella thermoacetica ATCC 39073] gi|83572013|gb|ABC18565.1| bacterial peptide chain release factor 2 (bRF-2) [Moorella thermoacetica ATCC 39073] Length = 330 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 160/320 (50%), Positives = 224/320 (70%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W++ A+ + + +L ++ +E++ + D L +LAL EDD S+ +E + +L Sbjct: 4 PGFWEDRARAEAVGKRLTYLKEKLARYRELESKCADVRELWQLALAEDDHSLEEEIARDL 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++ +VE + +LL+G D ++A L +H GAGGTESQDWA MLLRMY RW E R ++ Sbjct: 64 AAVEGKVEGQLLATLLNGPYDRHNAILSLHPGAGGTESQDWAAMLLRMYNRWCEDRGYQV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ +GEEAG+KSAT+L+KG NAYG+L+ E+GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 124 ELLDYLEGEEAGLKSATILVKGENAYGYLQAEKGVHRLVRISPFDAAGRRHTSFASVDVI 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P V+ E+EI+ D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N Sbjct: 184 PEVEADEEVEINPDDLKIDTFRSQGAGGQHVNKTDSAVRITHLPTGIVVTCQNERSQHAN 243 Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 + A +L+A+L L+ Q++E E+A I + EI WG QIRSYV PY +VKD RT +E Sbjct: 244 RLSAMKILQARLAALKRQEQEAELAQI-RGEQREIAWGSQIRSYVFHPYSLVKDHRTGVE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG +D F++A L Sbjct: 303 TGNIQAVMDGQIDPFIQAYL 322 >gi|289675203|ref|ZP_06496093.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae FF5] gi|302185552|ref|ZP_07262225.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae 642] gi|330896019|gb|EGH28242.1| peptide chain release factor 2 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330936871|gb|EGH41012.1| peptide chain release factor 2 [Pseudomonas syringae pv. pisi str. 1704B] gi|330968992|gb|EGH69058.1| peptide chain release factor 2 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330975436|gb|EGH75502.1| peptide chain release factor 2 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 248 Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 152/245 (62%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK Sbjct: 1 MFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ + Sbjct: 61 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QKR + E +K++IGWG QIRSYVL + +KDLRTNIE++ VLDGD+D++ Sbjct: 181 QEVQKRNAASQALEDTKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEY 239 Query: 347 MKATL 351 + A+L Sbjct: 240 LIASL 244 >gi|254247791|ref|ZP_04941112.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184] gi|124872567|gb|EAY64283.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184] Length = 248 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 149/245 (60%), Positives = 198/245 (80%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ + Sbjct: 61 NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E++KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 VEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDF 239 Query: 347 MKATL 351 + A+L Sbjct: 240 ISASL 244 >gi|163942871|ref|YP_001647755.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4] gi|229014346|ref|ZP_04171465.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048] gi|229063835|ref|ZP_04200139.1| Peptide chain release factor 2 [Bacillus cereus AH603] gi|229135993|ref|ZP_04264753.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196] gi|229169892|ref|ZP_04297588.1| Peptide chain release factor 2 [Bacillus cereus AH621] gi|163865068|gb|ABY46127.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4] gi|228613606|gb|EEK70735.1| Peptide chain release factor 2 [Bacillus cereus AH621] gi|228647451|gb|EEL03526.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196] gi|228716472|gb|EEL68176.1| Peptide chain release factor 2 [Bacillus cereus AH603] gi|228746946|gb|EEL96830.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048] Length = 326 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 162/317 (51%), Positives = 216/317 (68%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + + +++ + + + +L EE D + +E ++ Sbjct: 6 FWDDQQGAQAVINEANALKDMVGRFRQLDETFENLEMTHDLLKEEYDEDLHEELESEVKT 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR+FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRRFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH+PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 HAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG+++ F+ A L Sbjct: 306 VQAVMDGEINPFIDAYL 322 >gi|262198721|ref|YP_003269930.1| hypothetical protein Hoch_5555 [Haliangium ochraceum DSM 14365] gi|262082068|gb|ACY18037.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365] Length = 378 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 164/350 (46%), Positives = 230/350 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L LGG+FD D R+ L + + DP W N +A+ +RE + + + + + Sbjct: 22 ELENTLEELGGIFDVDEKRLRIEELESISADPAFWDNRQKAEDSLRELKSIKDVVGSYDK 81 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +L D ++LLELA + +D E + I+ ++ +F +LSGE D A L++ Sbjct: 82 LSSKLADAVVLLELAEDAEDAESAIEARTAAEEIERSLDELEFRRMLSGEYDQGGAVLQI 141 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGG ++ DWA MLLRM R+A+ + +K E L+ EEAGIKSATL+I G AYG L Sbjct: 142 NSGAGGVDAADWAQMLLRMILRYADHKGWKAEVLDEQAAEEAGIKSATLVITGEYAYGLL 201 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ +RR TSF+++ V P +DDS+ ++I E + RID YRA GAGGQ Sbjct: 202 KAEMGVHRLVRISPFDAQARRQTSFAAVTVSPDIDDSVHVDIDEGELRIDVYRAGGAGGQ 261 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+P+G+VVQCQ ERSQHKNKA A +LR++LY+ +R+ A Sbjct: 262 HVNKTESAVRITHLPSGIVVQCQNERSQHKNKASAMRVLRSRLYDYLKAERDAAAAEAAP 321 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYVL PY+ V D RT+++ + VLDGDLD F++ L Sbjct: 322 EKKKIEWGSQIRSYVLAPYRQVTDHRTDLKVGNVDAVLDGDLDPFIRTYL 371 >gi|229827336|ref|ZP_04453405.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC 49176] gi|229788274|gb|EEP24388.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC 49176] Length = 340 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 171/337 (50%), Positives = 222/337 (65%), Gaps = 3/337 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL LN +P W N +A M E L N I E+Q D L+E+A EE+D Sbjct: 2 RLEELNRLISEPGFWDNADKANATMAEISSLKNGIESFDELQTMYDDIGALIEMAEEEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 S++ E D L+R K E + + +LLSG D ++A + +HAGAGGTE+ DW +L+R Y Sbjct: 62 SSMVSEIGDELERFKTEFDTLRISTLLSGPYDKDNAIITLHAGAGGTEACDWTGILMRAY 121 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TRWA+ + FKTE ++ GEEAG+KS T+ I G NAYG+LK E GVHRLVRISP+++ + Sbjct: 122 TRWADSKGFKTEVIDYLAGEEAGVKSCTIEITGTNAYGYLKSEHGVHRLVRISPFNAAGK 181 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R TSF S V P +++ I+IEI + D RIDT+RASGAGGQH+N T SA+RITH P+G+VV Sbjct: 182 RQTSFVSCDVMPDIEEDIDIEIKDEDMRIDTFRASGAGGQHINKTSSAIRITHFPSGIVV 241 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ +NKA+A ML+AKLY L Q+ E + +I WG QIRSYVLQPY Sbjct: 242 SCQNERSQFQNKAKAMQMLKAKLYMLRQQENEAKEAGIRGEQKDIAWGSQIRSYVLQPYT 301 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL---AIKK 355 MVKD RTN+E + VLDG+ D F+ A L +IKK Sbjct: 302 MVKDHRTNVEIGNAQTVLDGNFDPFINAYLKWKSIKK 338 >gi|238916331|ref|YP_002929848.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750] gi|238871691|gb|ACR71401.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750] Length = 372 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 174/340 (51%), Positives = 230/340 (67%), Gaps = 2/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D DN +R+ L E P W N +++ M+E + L +A E++ L D L+ Sbjct: 25 LDLDNKQKRIEELEADMEAPGFWDNPDKSQNAMKELKGLKDAFERYNELETGLDDVKTLI 84 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+A E +D S++ E + + ++ ++E + E+LLSGE D+ DA L +HAGAGGTES DW Sbjct: 85 EMAEESNDQSLIPEIEEEITNLEDKMESLRIETLLSGEHDACDAILTLHAGAGGTESCDW 144 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ML RMYTRWAE + TE L+ +GEEAGIKS T+ I+G NAYG LK E GVHRLVRI Sbjct: 145 CQMLFRMYTRWAESHGYTTETLDYLEGEEAGIKSVTIEIRGENAYGHLKSEHGVHRLVRI 204 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+++ +R TSF S V P ++ I+IEI++ D RIDTYR+SGAGGQH+N T SA+RIT Sbjct: 205 SPFNAAGKRQTSFVSCDVMPDINQDIDIEINDDDLRIDTYRSSGAGGQHINKTSSAIRIT 264 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQI 312 H+PTG+VVQCQ ERSQH+NK +A ML+AKLY L E + E ++ I K +I +G QI Sbjct: 265 HLPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKEAENAENLSGIRGDVK-DINFGSQI 323 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 RSYVLQPY MVKD RTN E + VLDG++D F+ A L Sbjct: 324 RSYVLQPYTMVKDNRTNKEVANAGSVLDGNIDPFINAYLT 363 >gi|254251975|ref|ZP_04945293.1| peptide chain release factor 2 [Burkholderia dolosa AUO158] gi|124894584|gb|EAY68464.1| peptide chain release factor 2 [Burkholderia dolosa AUO158] Length = 248 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 149/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ + Sbjct: 61 NATIKVTGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATL 351 + A+L Sbjct: 240 ISASL 244 >gi|58579040|ref|YP_197252.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Welgevonden] gi|58617098|ref|YP_196297.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Gardel] gi|58416710|emb|CAI27823.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str. Gardel] gi|58417666|emb|CAI26870.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str. Welgevonden] Length = 251 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 148/249 (59%), Positives = 194/249 (77%), Gaps = 1/249 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGI 165 + S EAD ND ++E+ +GAGGTES DW+NMLLRMY RWAE FKT+ + DGEE G+ Sbjct: 1 MFSDEADQNDCFIEIQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGV 60 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSA + + G NAYGW K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I + Sbjct: 61 KSAIIKVIGYNAYGWSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHD 120 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+N +A+N+LR++LY Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLY 180 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +L+LQ++E+ S + +IGWG QIRSYV+ PYQMVKD+RT E + + VLDGDLD Sbjct: 181 QLKLQEKEKKMAQEHSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDA 240 Query: 346 FMKATLAIK 354 F+ ATL K Sbjct: 241 FIIATLTKK 249 >gi|254850994|ref|ZP_05240344.1| peptide chain release factor 2 [Vibrio cholerae MO10] gi|258620333|ref|ZP_05715371.1| peptide chain release factor 2 [Vibrio mimicus VM573] gi|258624704|ref|ZP_05719638.1| peptide chain release factor 2 [Vibrio mimicus VM603] gi|254846699|gb|EET25113.1| peptide chain release factor 2 [Vibrio cholerae MO10] gi|258582991|gb|EEW07806.1| peptide chain release factor 2 [Vibrio mimicus VM603] gi|258587212|gb|EEW11923.1| peptide chain release factor 2 [Vibrio mimicus VM573] Length = 248 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 153/245 (62%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ DS+D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+K Sbjct: 1 MFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ + Sbjct: 61 SATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ E +K++IGWG QIRSYVL + +KDLRT IE + VLDGDLD F Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|212213085|ref|YP_002304021.1| peptide chain release factor 2 [Coxiella burnetii CbuG_Q212] gi|212011495|gb|ACJ18876.1| bacterial peptide chain release factor 2 [Coxiella burnetii CbuG_Q212] Length = 289 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 160/280 (57%), Positives = 213/280 (76%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +L+ +E D ++ + + + ++++ + +F+ + SGE DSN+AYL++ AG+GGTE+Q Sbjct: 1 MAQLSKQEKDTDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RW +K F T +E GE AGIKSAT+ G AYGWL+ E GVHRLV Sbjct: 61 DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNKAQA LRAKLYE+E+ K++E + E+SK+EI WG Q Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGNQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + VKDLRT +E ++ VLDGD+D F++A L Sbjct: 241 IRSYVLDASR-VKDLRTGVETSNTQAVLDGDIDLFIEACL 279 >gi|227824555|ref|ZP_03989387.1| peptide chain release factor [Acidaminococcus sp. D21] gi|226905054|gb|EEH90972.1| peptide chain release factor [Acidaminococcus sp. D21] Length = 382 Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 160/331 (48%), Positives = 226/331 (68%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R+ L+ + P W + +A+ + +E +L + + ++ ++ D L E+A+EE Sbjct: 47 ERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSEVDTFTSLETKVDDLDTLWEMAMEEK 106 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D +++ E L+ K + + LLS E D+N+A + +HAGAGGTE+QDW MLLRM Sbjct: 107 DDTLVSEMESELEGAKHTLSELELGMLLSDEYDANNAIMNLHAGAGGTEAQDWTGMLLRM 166 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 +TR+AE + F+ E L++ GEEAG KSATL IKG NAYG+LK E+GVHRLVRISP+DSN+ Sbjct: 167 FTRYAEGKGFEVELLDVLPGEEAGTKSATLAIKGHNAYGFLKSEKGVHRLVRISPFDSNA 226 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+++ V P +D+++E+ I+ D R+D YRASGAGGQHVN T SAVR+TH+PTG+V Sbjct: 227 RRHTSFAAVDVMPEIDNTVEVNINMDDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIV 286 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ ERSQ +NK + +LRAKL+E E +++ + I WG QIRSYV QPY Sbjct: 287 VQCQNERSQLQNKERCLQLLRAKLFEYEKAIQDQKISDLAGDYQAIEWGSQIRSYVFQPY 346 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +VKD RT E + V+DGDLD F+++ L Sbjct: 347 TLVKDHRTGAETGNIQAVMDGDLDLFVESYL 377 >gi|227529549|ref|ZP_03959598.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC 49540] gi|227350508|gb|EEJ40799.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC 49540] Length = 356 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 167/346 (48%), Positives = 224/346 (64%), Gaps = 2/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDR 65 L GGLFD D + ++ K +P W + + A+ ++ L D +F+K ++D Sbjct: 2 LPASGGLFDLDALDESIAENEQKMAEPGFWDDNVAAQKVINANNELKDKRDTFVK-LRDN 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + + +EL E D + E + + E+E + LL GE D+ +A LE+H GA Sbjct: 61 IGNLQTSIELLELEPDDELQSEFEKSFGETQKELEQYRLNQLLDGEYDAKNAILEIHPGA 120 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDW MLLRMY RW E+ F E GEEAGIKS TLLIKG NA+G+L+ E+ Sbjct: 121 GGTEAQDWGAMLLRMYVRWGEQHGFNVETASYEAGEEAGIKSVTLLIKGHNAFGYLRSEK 180 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+D+ RRHTSF+S+ V P +D+S+ I+I SD R+DT+R+SGAGGQH+N Sbjct: 181 GVHRLVRISPFDAAGRRHTSFASVDVMPELDESVNIDIDPSDLRVDTFRSSGAGGQHINK 240 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITHIPTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E + E Sbjct: 241 TESAVRITHIPTGIVTSSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLE 300 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IGWG QIRSYV PY +VKD R+ E + V+DGDLD F+ A L Sbjct: 301 IGWGSQIRSYVFHPYTLVKDNRSGHETHNGQAVMDGDLDPFINAYL 346 >gi|90417430|ref|ZP_01225354.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2207] gi|90330764|gb|EAS46039.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2207] Length = 310 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 161/307 (52%), Positives = 221/307 (71%), Gaps = 1/307 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + RER L+ + I+++ + D+ LL +A+EEDD + + + ++ ++ +F Sbjct: 1 MGRERSALEAVVKTIEDLDTGVADSRELLAMAVEEDDADTVADVETEIAALEAQLAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RWA+ + FK E +E G+ AG Sbjct: 61 RRMFSGEMDPNNAYLDIQSGSGGTEAQDWAEMLLRMYLRWADDKGFKAELVECSAGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IK AT+ I G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ Sbjct: 121 IKGATVQISGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVYVSPEIDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH P+G+VVQ Q +RSQH+N+ + W MLRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQSQSQRSQHQNRDKCWQMLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+ R++ A E +K++IGWG QIRSYVL + +KDLRT +E + VLDG LD Sbjct: 241 YELEVSIRQKAAQATEDTKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTGAVLDGKLD 299 Query: 345 DFMKATL 351 F+ A+L Sbjct: 300 QFIVASL 306 >gi|116329128|ref|YP_798848.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330263|ref|YP_799981.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281974|sp|Q04V47|RF2_LEPBJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|122283090|sp|Q04YD0|RF2_LEPBL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116121872|gb|ABJ79915.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123952|gb|ABJ75223.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 367 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 163/330 (49%), Positives = 223/330 (67%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL LN K+EDP LW N EA+++ +++ L+ ++ IQ + D L+EL L+E Sbjct: 35 RLKALNEKSEDPDLWNNPEEARIVSQKKNELEKKLTPWFTIQQDILDFPDLVELTLDEKG 94 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + + E S R++ + E + L D A+L +H GAGGTESQDWA MLLRMY Sbjct: 95 ENGIGELSMEYNRLQEKFEELELLGALKNSEDLKPAFLNIHPGAGGTESQDWAEMLLRMY 154 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+ EK+ ++ ++I G+ AGIK+ TL + G A+G+LKGE G+HRLVRISP+D+N R Sbjct: 155 IRYFEKKGYQYSLIDIQAGDGAGIKNVTLHVVGDFAFGFLKGENGIHRLVRISPFDANKR 214 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQHVNTTDSAVRITH+P+G+VV Sbjct: 215 RHTSFVSVHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGIVV 274 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ A+ ML+A+LYE+E +K +E K +I WG QIRSYV PY Sbjct: 275 ACQNERSQIKNRDTAFKMLKARLYEMEQEKAKEELEKKSGEKKDIAWGSQIRSYVFHPYN 334 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +VKD RT+ E + + V+DGD++ F+ A L Sbjct: 335 LVKDHRTDHETGNVAAVMDGDIEPFILAYL 364 >gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM 17241] gi|167665826|gb|EDS09956.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM 17241] Length = 374 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 158/338 (46%), Positives = 226/338 (66%), Gaps = 4/338 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +D ++L+ L +T P W +V ++ E + + ++ D L L+ L Sbjct: 27 YDALRRKLAELEEQTTAPGFWNDVERSQKNQLETARVRGKLEACDKLNALYDDTLTLIGL 86 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A EE+D S+ E +++R + ++E ++ +LL+GE D+N+A + HAGAGGTE+QDWA Sbjct: 87 ADEENDESVYSEALADVERFESDLETQKLSTLLTGEYDANNAIMTFHAGAGGTEAQDWAQ 146 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 ML RMYTRWAE+ F + L+ DG+EAG+KSA++LI G NAYG+L+ E GVHRLVR+SP Sbjct: 147 MLYRMYTRWAERHGFTYKILDYLDGDEAGLKSASILITGDNAYGFLRSEAGVHRLVRVSP 206 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +D++ RRHTSF+S+ V P + D +EI+ D ++D +R+SGAGGQH+N T SAVR+THI Sbjct: 207 FDASGRRHTSFASVEVLPELPDDHSVEINPEDIKMDVFRSSGAGGQHINKTSSAVRLTHI 266 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSKTEIGWGRQIR 313 PTG+VV CQ ERSQ +N+ ML AKL +E+++RE +ANI E + +I WG QIR Sbjct: 267 PTGIVVSCQNERSQFQNREMCMKMLTAKL--VEIKEREHLANINEIKGEQMQIAWGSQIR 324 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV PY + KD RT E + + V+DGDLD F+ A L Sbjct: 325 SYVFMPYTLAKDHRTGFESGNINAVMDGDLDGFINAYL 362 >gi|167563347|ref|ZP_02356263.1| peptide chain release factor 2 [Burkholderia oklahomensis EO147] gi|167570518|ref|ZP_02363392.1| peptide chain release factor 2 [Burkholderia oklahomensis C6786] Length = 248 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 149/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ + Sbjct: 61 NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL+KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATL 351 + A+L Sbjct: 240 IGASL 244 >gi|260438124|ref|ZP_05791940.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876] gi|292809448|gb|EFF68653.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876] Length = 372 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 167/345 (48%), Positives = 230/345 (66%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L D DN +++ L ED W + ++ ++E + L +A + E++ Sbjct: 18 LKELRSALDLDNKAKKIEELEMHMEDQGFWNDPETSQKKLKELKALKDAFTNYNELEKLR 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +E+A EE+D SI+ + + + K E + +LLS E D+ +A L+++AGAG Sbjct: 78 DDARTFMEIADEENDTSIIPDIEELVNEFKNLFEKVRISTLLSEEYDNCNAILKLNAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA+MLLRMYTRWAE + + E L+ DG+EAG+KS T+ I G NAYG+LK E+G Sbjct: 138 GTESCDWASMLLRMYTRWAESKGYTVETLDYLDGDEAGVKSVTIQINGENAYGYLKSERG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+++N +R TSF S V P +++ ++++I+E D RIDTYR+SGAGGQH+N T Sbjct: 198 VHRLVRISPFNANGKRQTSFVSCDVMPDIEEDLDVDINEDDLRIDTYRSSGAGGQHINKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SA+RITHIPTG+VVQCQ ERSQH+NK +A ML+AKLY L+ Q+ E EI Sbjct: 258 SSAIRITHIPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKQQENAEKEAGIRGEVKEI 317 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSY+LQPY +VKD RTN E + VLDG++D F+ L Sbjct: 318 GWGNQIRSYILQPYTLVKDHRTNAESGNAQAVLDGNIDLFLGEYL 362 >gi|167581337|ref|ZP_02374211.1| peptide chain release factor 2, programmed [Burkholderia thailandensis TXDOH] gi|167619419|ref|ZP_02388050.1| peptide chain release factor 2, programmed [Burkholderia thailandensis Bt4] gi|257138616|ref|ZP_05586878.1| peptide chain release factor 2 [Burkholderia thailandensis E264] Length = 248 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 149/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ + Sbjct: 61 NATIKVSGDYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL+KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATL 351 + A+L Sbjct: 240 ISASL 244 >gi|76810558|ref|YP_334108.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1710b] gi|121600418|ref|YP_993518.1| peptide chain release factor 2, programmed [Burkholderia mallei SAVP1] gi|124383704|ref|YP_001029053.1| peptide chain release factor 2 [Burkholderia mallei NCTC 10229] gi|126449475|ref|YP_001081026.1| peptide chain release factor 2, programmed [Burkholderia mallei NCTC 10247] gi|134278044|ref|ZP_01764759.1| peptide chain release factor 2 [Burkholderia pseudomallei 305] gi|167720343|ref|ZP_02403579.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei DM98] gi|167739335|ref|ZP_02412109.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei 14] gi|167816549|ref|ZP_02448229.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei 91] gi|167824945|ref|ZP_02456416.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei 9] gi|167846462|ref|ZP_02471970.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei B7210] gi|167895040|ref|ZP_02482442.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei 7894] gi|167903426|ref|ZP_02490631.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei NCTC 13177] gi|167911676|ref|ZP_02498767.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei 112] gi|167919676|ref|ZP_02506767.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei BCC215] gi|254177740|ref|ZP_04884395.1| peptide chain release factor 2, programmed [Burkholderia mallei ATCC 10399] gi|254195760|ref|ZP_04902186.1| peptide chain release factor 2 [Burkholderia pseudomallei S13] gi|254357976|ref|ZP_04974249.1| peptide chain release factor 2 [Burkholderia mallei 2002721280] gi|76580011|gb|ABA49486.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1710b] gi|121229228|gb|ABM51746.1| peptide chain release factor 2, programmed [Burkholderia mallei SAVP1] gi|134251694|gb|EBA51773.1| peptide chain release factor 2 [Burkholderia pseudomallei 305] gi|148027103|gb|EDK85124.1| peptide chain release factor 2 [Burkholderia mallei 2002721280] gi|160698779|gb|EDP88749.1| peptide chain release factor 2, programmed [Burkholderia mallei ATCC 10399] gi|169652505|gb|EDS85198.1| peptide chain release factor 2 [Burkholderia pseudomallei S13] Length = 248 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 149/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ + Sbjct: 61 NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL+KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATL 351 + A+L Sbjct: 240 ISASL 244 >gi|297520245|ref|ZP_06938631.1| peptide chain release factor 2 [Escherichia coli OP50] Length = 248 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 156/245 (63%), Positives = 188/245 (76%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIK Sbjct: 1 MFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 S T+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ + Sbjct: 61 SVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F Sbjct: 181 LEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|258421538|ref|ZP_05684463.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9719] gi|258423403|ref|ZP_05686294.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9635] gi|257842464|gb|EEV66888.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9719] gi|257846464|gb|EEV70487.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9635] Length = 352 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 169/344 (49%), Positives = 228/344 (66%), Gaps = 3/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD +N + +P+ W N +A+ ++ + L ++ K +Q + D Sbjct: 3 LGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDM 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +L EE D + ++ + K +V+ + + LL G D+N+A LE+H GAGGTE Sbjct: 63 DATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHR Sbjct: 123 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 LVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH+N T+S Sbjct: 183 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307 A+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ E+A I + EIG Sbjct: 243 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIG 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 345 >gi|253575894|ref|ZP_04853228.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786 str. D14] gi|251844688|gb|EES72702.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786 str. D14] Length = 342 Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 176/325 (54%), Positives = 226/325 (69%), Gaps = 4/325 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K P W + +A+ ++ E + +++ +Q+ + ++ ELA EE D S+ E Sbjct: 12 KMAAPDFWDDNEKAQGIIAEMNAVKSSVDQYTALQNEYDELEMMAELAEEEGDESLAAEV 71 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +D+++++ ++E + + LL+ D +A LE+H GAGGTESQDW MLLRMYTRWAEKR Sbjct: 72 ADSVEKLVKKLEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLLRMYTRWAEKR 131 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 132 GFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVS 191 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P + D +EIEI D +IDTYRASGAGGQH+NTTDSAVRITHIPTG+VV CQ ERS Sbjct: 192 CDVVPEISDDVEIEIRNEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQNERS 251 Query: 269 QHKNKAQAWNMLRAKLYE--LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 Q KN+ +A MLR+KLYE +E Q+RE GE S +I WG QIRSYV PY MVKD Sbjct: 252 QIKNRERAMTMLRSKLYERKIEEQQRELDEIRGEQS--DIAWGSQIRSYVFHPYSMVKDH 309 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351 RTN+E + V+DGDLD F+ L Sbjct: 310 RTNVETGNVGAVMDGDLDAFIDGYL 334 >gi|332534752|ref|ZP_08410580.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis ANT/505] gi|332035839|gb|EGI72323.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis ANT/505] Length = 248 Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 153/245 (62%), Positives = 190/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG DSNDAYL++ +G+GGTE+QDW N+LLRMY RW E + FK E +E DG+ AGIK Sbjct: 1 MFSGPHDSNDAYLDLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP +DD+IEI+I+ S Sbjct: 61 GATVRFVGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ ERSQHKNKAQA L+AKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQ++ E +K++IGWG QIRSYVL + +KDLRT +E + VLDG+LD F Sbjct: 181 LELQQQNAEKQTQEDAKSDIGWGSQIRSYVLDDAR-IKDLRTGVENRNTQSVLDGNLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|297848140|ref|XP_002891951.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp. lyrata] gi|297337793|gb|EFH68210.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp. lyrata] Length = 470 Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 159/351 (45%), Positives = 226/351 (64%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S+ + + W + RL L+ + P LW + I A + RE L + + Sbjct: 110 ISQSIQVIKRRLQWKKLLVRLKVLSAELNKPDLWNDPIHAGKISREHGSLTGKMKGVMTF 169 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L+LA EE+D + ET + ++ + K+ E+LLS E D Y+EV Sbjct: 170 ERELLEHIDMLKLAKEENDTELESETLKAMMDMRRVSKEKELEALLSAENDPCSCYIEVQ 229 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+M++ MY WA++RKF ++ GE AGIK AT+ + G +YG+ K Sbjct: 230 AGAGGTESNDWASMVMEMYKTWAQRRKFSVTVVDEAAGEIAGIKRATIKVNGEYSYGYAK 289 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P++ D S ++I++SD RI+ +R+ GAGGQ Sbjct: 290 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVQINDSDLRIERFRSGGAGGQ 349 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTTDSAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ + Sbjct: 350 HANTTDSAVRIIHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 409 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S TEI WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 410 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 460 >gi|134296298|ref|YP_001120033.1| peptide chain release factor 2 [Burkholderia vietnamiensis G4] gi|134139455|gb|ABO55198.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia vietnamiensis G4] Length = 248 Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 148/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ + Sbjct: 61 NATIKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATL 351 + A+L Sbjct: 240 ISASL 244 >gi|146296348|ref|YP_001180119.1| peptide chain release factor 2 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409924|gb|ABP66928.1| bacterial peptide chain release factor 2 (bRF-2) [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 323 Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 162/311 (52%), Positives = 222/311 (71%), Gaps = 2/311 (0%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 ++ ++++ + L + I +++ + D +L +L +EE + + E +L ++ ++E Sbjct: 4 SQKVLQQIKRLKDKIERYQKLYSQWEDLKVLTQLCIEESNIEMSDELEKDLIDLERKIEE 63 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + E LL+G D N+A L +HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GE Sbjct: 64 FKLEILLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGE 123 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 EAGIK+ T+ I G NAYG+LK E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +I Sbjct: 124 EAGIKNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDI 183 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI E D IDT+RASGAGGQHVN T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+ Sbjct: 184 EIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILK 243 Query: 282 AKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 AKL EL E ++RE+I + + +TEIGWG QIRSYV PY +VKD RT+ E + V+D Sbjct: 244 AKLLELREKERREKIQKL-KGEQTEIGWGNQIRSYVFCPYTLVKDHRTDAEVGNVEAVMD 302 Query: 341 GDLDDFMKATL 351 G++D F+ A L Sbjct: 303 GEIDVFINAYL 313 >gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021] gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021] Length = 372 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 163/351 (46%), Positives = 230/351 (65%), Gaps = 3/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ LN + + D D ++L L + P LW + A+ + + +L ++ ++ Sbjct: 12 ELTGTLNSIQDVLDLDAIRKQLEELGEQAAAPDLWNDQEHAQKVTSKLSYLQGEVNRVES 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + RL D +L ELA EDD +E L +K ++ + +LLSGE D+ +A + + Sbjct: 72 LGQRLEDLTVLYELAAAEDDEETREEADRELASLKSDIGALEVRTLLSGEYDAREAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++ AGG ++ DWA MLLRMY RWAE++ + TE E EEAGIKSAT +K P AYG L Sbjct: 132 NSQAGGVDAADWAQMLLRMYIRWAERKGYPTEVYETSYAEEAGIKSATFTVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GE G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I+E D R+D YR+SG GGQ Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGVDVVPVVETTDHIDINEDDLRVDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L++KL LE +++EE A + E Sbjct: 252 GVNTTDSAVRLTHLPTGIVVSCQNERSQLQNKATAMAVLQSKL--LERKRQEEAAALNEI 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG QIR+YVL PYQ+VKDLRT E +PS VLDGDLD+F+++ + Sbjct: 310 RGEATTSWGTQIRNYVLHPYQIVKDLRTGTEAGNPSSVLDGDLDEFIESEI 360 >gi|325295572|ref|YP_004282086.1| hypothetical protein Dester_1396 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066020|gb|ADY74027.1| hypothetical protein Dester_1396 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 374 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 180/344 (52%), Positives = 243/344 (70%), Gaps = 2/344 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 G FD + ++L+ + + + W + +A+ + ER +++ ++ I+ +L D Sbjct: 24 GYFDIEKMKKKLTEIEEEMSSANFWNDQKKAQSISMERNRIESELNTFSSIEQQLEDIET 83 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLE+A EE + S+L E L+ I+ E+ + +++LSGE D N+A + +HAGAGGTES Sbjct: 84 LLEIAEEESEESLLDEAESFLKNIERELNSLEVKTVLSGEFDKNNAIVTIHAGAGGTESC 143 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA ML+RMY RWAE++ F+TE L++ + EEAGIKSAT+LIKG AYG L+ E G HRLV Sbjct: 144 DWAEMLMRMYLRWAERKGFETEILDLQENEEAGIKSATILIKGAYAYGLLRAEHGTHRLV 203 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DSN+RRHTSF + V P +D+ I+IEI + D RIDTYRASGAGGQHVN TDSAVR Sbjct: 204 RISPFDSNARRHTSFCGVIVVPEIDEDIDIEIKDEDLRIDTYRASGAGGQHVNKTDSAVR 263 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGR 310 ITH+PTG+VV CQ ERSQ +N+ +A +L+A+LYELE QKREE IA KT I WG Sbjct: 264 ITHLPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAEARGEHKT-IAWGN 322 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV PYQMVKD RT IE ++ + V+DG++D F++ L K Sbjct: 323 QIRSYVFHPYQMVKDHRTGIETSNINAVMDGEIDQFIEGFLKQK 366 >gi|154175392|ref|YP_001408592.1| peptide chain release factor 2 [Campylobacter curvus 525.92] gi|112803979|gb|EAU01323.1| peptide chain release factor 2 [Campylobacter curvus 525.92] Length = 372 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 168/354 (47%), Positives = 234/354 (66%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ ++ +G + + +RL + +P WQ++ +A L +E+ + N ++ Sbjct: 16 RLNTKVENIGSIIKPQSIKERLQEIERLEHEPDFWQDIAKAGALNKEKTKISNMLAKFTN 75 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L ELA E D L D+ ++ ++ + LLSGE D+ +A + + Sbjct: 76 AKAAVDDAKELYELANSESDEETLNSLFDDATELENKITALEISMLLSGEDDNKNAIISI 135 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+K + ++KG NAYG+L Sbjct: 136 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYL 195 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D +IDTYRASGAGGQ Sbjct: 196 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEIDDDIEIEIEEKDLKIDTYRASGAGGQ 255 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PTG+VVQCQ +RSQHKN+A A ML+++LYELEL K++E +N E Sbjct: 256 HVNKTESAIRITHMPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASNSVE- 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 315 -KSEIGWGHQIRSYVLFPYQQVKDNRSGQAFSQTDAILDGDIKKMIEGVLISQK 367 >gi|225375950|ref|ZP_03753171.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM 16841] gi|225212203|gb|EEG94557.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM 16841] Length = 338 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 157/321 (48%), Positives = 219/321 (68%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED W + + ++ M+ + + + ++ +++ + D L+E+ EE+D S++ E + Sbjct: 2 EDGDFWNDPVVSQNKMKTLKSMKDDVATYEKLATQFDDIETLIEMGYEENDASLIPEIEE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + + ++LLSGE D ++A L +HAGAGGTES DWA ML RMY++WA+ R + Sbjct: 62 MLNEFVTTFDNIRIKTLLSGEYDGDNAILSLHAGAGGTESCDWAQMLFRMYSKWADSRGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + L+ DG+EAGIKS T I G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 ELVVLDSLDGDEAGIKSITFQINGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQH Sbjct: 182 VMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK +A ML+AKLY L+ Q+ E A TEIGWG QIRSYV+QPY MVKD RT + Sbjct: 242 QNKDKAMQMLKAKLYLLKEQENAEKAAGIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTGV 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DG +D F+ L Sbjct: 302 ETGNVDSVMDGKIDLFINGYL 322 >gi|167586751|ref|ZP_02379139.1| peptide chain release factor 2 [Burkholderia ubonensis Bu] Length = 248 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 148/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ + Sbjct: 61 NATVKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATL 351 + A+L Sbjct: 240 ISASL 244 >gi|239636633|ref|ZP_04677635.1| peptide chain release factor 2 [Staphylococcus warneri L37603] gi|239597988|gb|EEQ80483.1| peptide chain release factor 2 [Staphylococcus warneri L37603] Length = 330 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 165/322 (51%), Positives = 224/322 (69%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W + A+ ++ + L + ++ E+++ + D +EL EE D + QE +N Sbjct: 4 EPNFWDDQNRAQDIIDKNNALKSMVNGYYELEESVEDMSATVELLQEEFDEDMKQELENN 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K E+++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ FK Sbjct: 64 VVEFKAEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQSGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183 Query: 212 YPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P D D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 184 IPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++E E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F++A L Sbjct: 303 EETGKVDAVMDGDIGPFIEAYL 324 >gi|184154810|ref|YP_001843150.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956] gi|183226154|dbj|BAG26670.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956] Length = 355 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 168/345 (48%), Positives = 219/345 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ GGLFD D + ++ + P W + A+ + L +QD++ Sbjct: 1 MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + + E+ E D + E DN ++ + + E LL G D +DA LE+H GAG Sbjct: 61 EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWA + F E GEEAGIKS TLLIKG NAYG+L E+G Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI SD R+DT+RASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E + EI Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQKEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYV PY +VKD RT E V+DGDLD F+ A L Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVVGVMDGDLDPFINAYL 345 >gi|317057134|ref|YP_004105601.1| peptide chain release factor 2 [Ruminococcus albus 7] gi|315449403|gb|ADU22967.1| peptide chain release factor 2 [Ruminococcus albus 7] Length = 378 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 233/349 (66%), Gaps = 11/349 (3%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L ++D +NA +++ L+ K +P W + ++++++++ ++L+ + + D Sbjct: 23 LHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAADDI 82 Query: 70 LILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +++E+A EED+ +++E L ++K +++ E+LL+GE D ++A L HAGAG Sbjct: 83 EVMIEMAAEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHAGAG 142 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW ML+RMYT+WA+ F + ++I +G +AGIKS ++ I+G NAYG+LK E G Sbjct: 143 GTEAQDWTEMLIRMYTKWADSHGFSAKIMDILEGGDAGIKSCSMFIEGENAYGYLKSESG 202 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+DS+ RHTSFS++ V P +DD+IE+EI D ++ YRASGAGGQH+N T Sbjct: 203 IHRLVRISPFDSSGSRHTSFSAVEVMPELDDTIEVEIRPEDIEMEVYRASGAGGQHINKT 262 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE----LQKREEIANIGESS 302 SAVR+ H PTG+V CQ +RSQ +NK A ML+AKL E++ L+K E+I + Sbjct: 263 SSAVRLIHKPTGIVTACQTQRSQFQNKDYAMKMLKAKLIEIKEREHLEKIEDIKGV---- 318 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EI WG QIRSYV PY +VKDLRT E + V+DGDLD F+ A L Sbjct: 319 QKEIAWGSQIRSYVFMPYTLVKDLRTGFEYNNVKAVMDGDLDGFINAYL 367 >gi|332638053|ref|ZP_08416916.1| peptide chain release factor 2 [Weissella cibaria KACC 11862] Length = 332 Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 165/326 (50%), Positives = 221/326 (67%), Gaps = 14/326 (4%) Query: 33 PHLW------QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 P W Q VI+A +++ R+ D+ ++ +++ LEL E D + Sbjct: 4 PDFWNDNVAAQKVIDANNILKGRR--DDYLNLTAGVENVET----ALELLAEMPDEDMQA 57 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E +L+++ ++E + LL+ D N+A LE+H G+GGTES DW L RMYTRWAE Sbjct: 58 EMEADLEKLAADLESYRLAQLLNEPYDKNNAILEIHPGSGGTESADWGANLQRMYTRWAE 117 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E ++ H G+ AGI SATL+I G NAYG+L+ E+GVHR VRISP+DS RRHTSF Sbjct: 118 RHGFKVEIMDYHPGDVAGIDSATLMITGHNAYGYLRSERGVHRFVRISPFDSAGRRHTSF 177 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SI V P +DDS++++I+ +D ++D YRASGAGGQH+N T SAVR+THIPTG+VV QQ+ Sbjct: 178 VSIDVMPELDDSVDVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPTGIVVASQQQ 237 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 RSQ +NK A+ MLRAKLY+LE+ K+E E A+I + E GWG QIRSYV QPY+MVKD Sbjct: 238 RSQFQNKDTAYAMLRAKLYQLEMDKKEKERASIA-GEQLENGWGSQIRSYVFQPYRMVKD 296 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RTN E +P V+DGDLD F+ A L Sbjct: 297 HRTNYESGNPQGVMDGDLDPFINAYL 322 >gi|328472050|gb|EGF42927.1| peptide chain release factor 2 [Vibrio parahaemolyticus 10329] Length = 248 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 191/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+ +GE AG+K Sbjct: 1 MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP +D++I I+I+ + Sbjct: 61 SATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIAIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|110801299|ref|YP_696849.1| peptide chain release factor 2 [Clostridium perfringens ATCC 13124] Length = 362 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 162/351 (46%), Positives = 235/351 (66%), Gaps = 3/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +G D + ++ + L K ++ W +V +A+ + +E + + + I K Sbjct: 12 ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +R+ D +L EL +EE+D +E ++ + E++ + E++LSGE D NDA L + Sbjct: 72 LNERIDDVEVLKEL-MEENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNDAILTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G GG+++ DW MLLRMYTRW EK+ + E ++ G+EAG+KS TL +KG AYG+L Sbjct: 131 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +IEI+ D RIDTYRA GAGGQ Sbjct: 191 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGE 300 HVN T+SAVRITHIPTG+VVQCQ ERSQ N+ A ML++KL EL E +E+I ++ Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K ++GWG QIRSYV PY MVKD RTN+E ++ + V+DGD+D+F+ A L Sbjct: 311 ELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360 >gi|167837158|ref|ZP_02464041.1| peptide chain release factor 2, programmed [Burkholderia thailandensis MSMB43] Length = 248 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 148/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ + Sbjct: 61 NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL+KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATL 351 + A+L Sbjct: 240 ISASL 244 >gi|225175296|ref|ZP_03729291.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1] gi|225169048|gb|EEG77847.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1] Length = 288 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 161/281 (57%), Positives = 208/281 (74%), Gaps = 3/281 (1%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + LA +E D + + + E++ + L G D+N+A + +H GAGGTESQD Sbjct: 1 MTLAEDEGDKELWVDAEQVAAELAAEMDKLELAVLFRGRYDANNAIIAIHPGAGGTESQD 60 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WANMLLRMYTRWAE+R ++ E L++ G+EAGIKSATLLIKG NAYG+LK E+GVHRLVR Sbjct: 61 WANMLLRMYTRWAERRNYQVEVLDLLPGDEAGIKSATLLIKGRNAYGFLKAERGVHRLVR 120 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 ISP+D+ SRRHTSF+S+ V P V++ IEIS D +IDTYRASGAGGQHVNTTDSAVR Sbjct: 121 ISPFDAASRRHTSFASLDVLPEVEEGDSGIEISPDDLKIDTYRASGAGGQHVNTTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310 ITHIPTG VVQCQ ERSQH N+ +A +L+A+L +L + Q+ EE++N+ + EI WG Sbjct: 181 ITHIPTGTVVQCQNERSQHSNRDRAMKILKARLADLYQRQQAEELSNL-RGEQKEIAWGS 239 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV QPY MVKD RT +E + + V+DGDLD+ +++ L Sbjct: 240 QIRSYVFQPYTMVKDHRTGVEVGNINAVMDGDLDELIESYL 280 >gi|148981822|ref|ZP_01816539.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales bacterium SWAT-3] gi|145960730|gb|EDK26070.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales bacterium SWAT-3] Length = 248 Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 192/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K Sbjct: 1 MFSGEHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ S Sbjct: 61 GATVRISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QK+ E +K++IGWG QIRSYVL + +KDLRT IE + VLDGDLD F Sbjct: 181 LEIQKQNAEKQANEDTKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|325662438|ref|ZP_08151044.1| peptide chain release factor 2 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086228|ref|ZP_08335310.1| peptide chain release factor 2 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471272|gb|EGC74496.1| peptide chain release factor 2 [Lachnospiraceae bacterium 4_1_37FAA] gi|330406387|gb|EGG85901.1| peptide chain release factor 2 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 316 Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 158/309 (51%), Positives = 221/309 (71%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L +++ +E+ + D IL+++A EE+D S+++E L++I+ E + E Sbjct: 1 MKELKSLQDSVKRTEELYRQYEDIQILIDMAYEENDESMIKEIETELKQIESTYEELRIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLS E D ++A + +HAGAGGTE+ DW NML RMY RW E + F TE L+ DG+ GI Sbjct: 61 TLLSEEYDKDNAIVTLHAGAGGTEACDWVNMLYRMYNRWIESKGFTTEVLDYLDGDITGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T + G NAYG+L+ E+GVHRLVRISP++S ++R TSF+S V P ++D I+IEI+E Sbjct: 121 KTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSANKRQTSFASCDVVPDLEDDIDIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 + +IDTYRASGAGGQHVN T SA+R+TH+PTG+VVQCQ ERSQH NK +A ML+AKLY Sbjct: 181 DELKIDTYRASGAGGQHVNKTSSAIRLTHLPTGIVVQCQNERSQHSNKEKAMQMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++ E + EIG+G QIRSYV+QPY +VKD RTN E + + VLDG+LD Sbjct: 241 LLKEQEQAEKVSGIRGEVKEIGFGNQIRSYVMQPYTLVKDHRTNEESGNVTSVLDGNLDP 300 Query: 346 FMKATLAIK 354 F+ A L ++ Sbjct: 301 FINAYLKMR 309 >gi|291522080|emb|CBK80373.1| bacterial peptide chain release factor 2 (bRF-2) [Coprococcus catus GD/7] Length = 336 Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 157/321 (48%), Positives = 220/321 (68%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W N +A M+E ++L + + ++ D LLE+ EE+D S++ E + Sbjct: 3 EEPGFWDNADKANNSMKELKNLKDTVEEYHRLETAWEDVETLLEMGYEENDASLIPEVQE 62 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + + E+ + ++LLS E D ++A + +HAGAGGTE+ DW +ML RMYTRWAEK F Sbjct: 63 AMADFEKRFEHLRIKTLLSEEYDGDNAIVTLHAGAGGTEACDWVSMLFRMYTRWAEKHGF 122 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 T L+ DGEEAGIKS T+ I G NAYG++K E+G+HRLVRISP+++ +R TSF+S Sbjct: 123 TTTVLDYLDGEEAGIKSVTVEIAGENAYGYMKSEKGIHRLVRISPFNAAGKRQTSFASCD 182 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PT +VVQCQ ERSQH Sbjct: 183 VMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTNIVVQCQNERSQH 242 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK +A ML+AKLY L+ Q+ +E + + WG QIRSYV+QPY++VKD RT Sbjct: 243 MNKDKAMQMLKAKLYLLKQQENQEKLSGIRGEVKDNAWGSQIRSYVMQPYKLVKDHRTGA 302 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E ++ V+DGD+D F+ A L Sbjct: 303 ESSNVDAVMDGDIDLFINAYL 323 >gi|170702008|ref|ZP_02892928.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10] gi|171322226|ref|ZP_02911072.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5] gi|172061072|ref|YP_001808724.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6] gi|170133098|gb|EDT01506.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10] gi|171092451|gb|EDT37797.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5] gi|171993589|gb|ACB64508.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6] gi|325525095|gb|EGD02988.1| peptide chain release factor 2 [Burkholderia sp. TJI49] Length = 248 Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 148/245 (60%), Positives = 197/245 (80%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ + Sbjct: 61 NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR+ + ESSKT++GWG QIRSYVL + VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDF 239 Query: 347 MKATL 351 + A+L Sbjct: 240 ISASL 244 >gi|227514375|ref|ZP_03944424.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC 14931] gi|227087241|gb|EEI22553.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC 14931] Length = 355 Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 168/345 (48%), Positives = 219/345 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ GGLFD D + ++ + P W + A+ + L +QD++ Sbjct: 1 MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + + E+ E D + E DN ++ + + E LL G D +DA LE+H GAG Sbjct: 61 EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWA + F E GEEAGIKS TLLIKG NAYG+L E+G Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI SD R+DT+RASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E + EI Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYV PY +VKD RT E V+DGDLD F+ A L Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYL 345 >gi|116333278|ref|YP_794805.1| protein chain release factor B [Lactobacillus brevis ATCC 367] gi|116098625|gb|ABJ63774.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus brevis ATCC 367] Length = 343 Score = 321 bits (823), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 158/319 (49%), Positives = 210/319 (65%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A++L+ E + + + + ++ D ++ LEL EE D + E + Sbjct: 15 PDFWDDAQAAQLLIDETNEMKKKVDEFQRLVTQVEDLMVALELLQEEPDAEMQAEFETDF 74 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + + LL+ + D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+ FK Sbjct: 75 ATAQAALRQYRLNLLLNQKYDHNNALLEIHPGAGGTESQDWGDMLLRMYTRWAEQHDFKV 134 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 L+ G+ AG+ S TL I G NAYG+L+ E+GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 135 TVLDYQPGDVAGLSSVTLAIAGRNAYGYLRSEKGVHRLVRISPFDSAGRRHTSFASVDVL 194 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DDS++I+I+ ++ ++D YRASGAGGQHVN T SAVRITHIPTG+V Q Q +RSQ +N Sbjct: 195 PELDDSVDIDINPAELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVTQSQAQRSQLQN 254 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + A MLRAKLYE +K+ + E + EIGWG QIRSYV PY MVKD RTN E Sbjct: 255 RQTALAMLRAKLYERAEEKKAQEKAALEGDQMEIGWGSQIRSYVFHPYTMVKDHRTNYET 314 Query: 333 TSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 315 GNGQAVMDGDLDPFIDAFL 333 >gi|323140697|ref|ZP_08075618.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT 12067] gi|322414821|gb|EFY05619.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT 12067] Length = 329 Score = 321 bits (823), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 158/320 (49%), Positives = 220/320 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ L + ++ + D L E+A EE+D S+L E + Sbjct: 3 DPTFWDDPEKAQKTAQDVNSLKEEVDGFHKLSAGVDDLEALQEMAAEENDESLLPEMDEL 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + E+E+ + LLSGE D+N+A L +HAGAGGTE+QDW +MLLRM+TR+AE+ F Sbjct: 63 LAKCRSELEHLELGMLLSGEYDANNAILTLHAGAGGTEAQDWTSMLLRMFTRFAEQNGFA 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAG+KSAT+ + G NAYG+L+ E+GVHRLVRISP+D+N+RRHTSF+++ V Sbjct: 123 LEMLDYQPGDEAGVKSATIQVNGHNAYGFLRSEKGVHRLVRISPFDANARRHTSFAAVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD++++ I+ + R+D YR+SGAGGQHVN T SAVR+TH PTG+VVQCQ ERSQ + Sbjct: 183 MPELDDTVDVNINMDEVRVDVYRSSGAGGQHVNKTSSAVRMTHEPTGIVVQCQNERSQIQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ + MLRAKLYE E K++ + + I WG QIRSYV QPY MVKD RT E Sbjct: 243 NRERCLQMLRAKLYEYEKAKQDALVSDIAGDYQNIEWGSQIRSYVFQPYTMVKDHRTGCE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGDL F++A L Sbjct: 303 TGNIQAVMDGDLMPFVEAYL 322 >gi|327398507|ref|YP_004339376.1| peptide chain release factor 2 [Hippea maritima DSM 10411] gi|327181136|gb|AEA33317.1| peptide chain release factor 2 [Hippea maritima DSM 10411] Length = 359 Score = 321 bits (823), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 168/354 (47%), Positives = 240/354 (67%), Gaps = 6/354 (1%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L+ ++N + D + L + + ED +W + + L R++ ++ + ++ Sbjct: 6 IQLADKINKIKEYLDPPKRKKELDDIQKQLEDSSVWNDYQLLQNLKRKQSSIEQKLKTVE 65 Query: 61 EIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 E+++ D LLEL+ EDD S QE DN++ + +VE + E+ LSGE D ++A + Sbjct: 66 ELEN---DVDTLLELSEFVEDDESYKQELEDNIKELTKKVEKAETETFLSGEHDFSNAIV 122 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 +H+GAGGTES DW +ML RMY+ W + ++K E +++ G+EAG KS T L+ G AYG Sbjct: 123 TIHSGAGGTESCDWVSMLFRMYSMWCDNNEYKIEVMDLQPGDEAGYKSITFLVSGEKAYG 182 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E GVHRLVRISP+D+N RRHTSF+S+ V P ++D EI+I D +IDT+RASGAG Sbjct: 183 YLKNENGVHRLVRISPFDANKRRHTSFASVSVLPEINDDTEIDIDPKDLKIDTFRASGAG 242 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN TDSA+RITHIPTG+VV CQ ERSQHKNKA A +L+AKLY+LE +K+++ Sbjct: 243 GQHVNKTDSAIRITHIPTGIVVSCQNERSQHKNKAFALKILKAKLYQLEEEKKKKELEKL 302 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK--TSPSDVLDGDLDDFMKATL 351 E K +I WG QIRSYVL PY+MVKD RT +EK + VL+G++DDF++ L Sbjct: 303 EGEKKKIEWGSQIRSYVLHPYKMVKDHRTGVEKKDVAALAVLNGEIDDFIREAL 356 >gi|289663374|ref|ZP_06484955.1| peptide chain release factor 2 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668830|ref|ZP_06489905.1| peptide chain release factor 2 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 276 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 155/263 (58%), Positives = 203/263 (77%), Gaps = 1/263 (0%) Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 S +L + + VE +F+ + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R Sbjct: 2 SSDLDKYQTHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESR 61 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +KTE +E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S Sbjct: 62 GWKTELMEVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTS 121 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++V P VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RS Sbjct: 122 VFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRS 181 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+N+ A ML AKLYELE+QKR + E++K++IGWG QIR+YVL + +KDLRT Sbjct: 182 QHQNRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRT 240 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 IE++ VLDGDLD+F++A+L Sbjct: 241 GIERSDTQKVLDGDLDEFVEASL 263 >gi|317153200|ref|YP_004121248.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2] gi|316943451|gb|ADU62502.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2] Length = 391 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 164/342 (47%), Positives = 215/342 (62%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG FD+ RL + + P W L+RE+ L + ++ + + D Sbjct: 40 FGGGFDYAETKTRLEAIEHQLSKPGAWDKPGALTPLLREKTQLSDKLAMYESLAQAKDDL 99 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LELA E D + + K + + ++ + E D +A LE+H GAGG E Sbjct: 100 DAWLELAHESRDEEAMAGLDGQISVFKERLGITELATMFAFEHDKGNAILEIHPGAGGVE 159 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWA MLLRMYTR+AE++ FK L+ GEEAGIKS TL I+G +YG LKGE GVHR Sbjct: 160 SQDWAEMLLRMYTRFAERKGFKITQLDYQVGEEAGIKSVTLQIEGLYSYGLLKGESGVHR 219 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 L+RISP+DS+ RRHTSF+S+ VYP +DD IEIE+ + D RID +R+SG GGQ VN T SA Sbjct: 220 LIRISPFDSSGRRHTSFASVDVYPDMDDDIEIEVRDEDLRIDVFRSSGPGGQSVNKTSSA 279 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+V QCQ E+SQH+NKA A +++A+LYE ELQK EE +K I WG Sbjct: 280 VRITHLPTGIVAQCQNEKSQHRNKATALRLVKARLYERELQKIEESRRQDYQAKGAIAWG 339 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+Y LQPY++VKD R+N E + LDGDLD ++ L Sbjct: 340 SQIRTYTLQPYRLVKDHRSNSETGNVDAFLDGDLDAMIRNHL 381 >gi|315652552|ref|ZP_07905533.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986] gi|315485181|gb|EFU75582.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986] Length = 351 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 159/336 (47%), Positives = 233/336 (69%), Gaps = 2/336 (0%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ +++ L+ E+P W + E+ ++RE + L + + +++ D +L+E+ Sbjct: 2 DSKEKKIIELDRAMEEPSFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMG 61 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 EE+D S++ E L+ E++ + +LL+GE DS++A ++++AGAGGTES DW +M Sbjct: 62 YEENDESLIPEIEAMLEEFTKEIDALKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSM 121 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMYTRWA K + + L+I +G+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+ Sbjct: 122 LYRMYTRWAAKEGYTVDVLDILEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPF 181 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ +R TSF S + P +++ ++++I+ D RIDTYR+SGAGGQH+N T SA+RITHIP Sbjct: 182 NAAGKRQTSFVSCDIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIP 241 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSY 315 TGVVVQCQ ERSQ +NK +A ML+AKL+ L+ Q E++++I K +IGWG QIRSY Sbjct: 242 TGVVVQCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVK-DIGWGNQIRSY 300 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V+QPY MVKD RT E + + V+DGD+D F+ A L Sbjct: 301 VMQPYTMVKDHRTGAESGNVTAVMDGDIDKFIIAYL 336 >gi|205375066|ref|ZP_03227857.1| hypothetical protein Bcoam_18782 [Bacillus coahuilensis m4-4] Length = 327 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 172/321 (53%), Positives = 220/321 (68%), Gaps = 2/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ L+ E L + + + + + + EL EE D +L E Sbjct: 3 DPDFWNDQQKAQGLINEANGLKDMVGQYHSMVEAHENLEVTFELVKEEGDEELLAELEPE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + ++ + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ FK Sbjct: 63 LNDLTKQLNNYELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VV CQ ERSQ K Sbjct: 183 MPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQSERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ A ML++KLY+L+++++E ++A I + +IGWG QIRSYV PY MVKD RTN Sbjct: 243 NREAAMKMLKSKLYQLKIEEQEAQLAEI-RGEQKDIGWGSQIRSYVFHPYSMVKDHRTNT 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + + V+DGDLD F+ A L Sbjct: 302 EVGNTNSVMDGDLDVFIDAYL 322 >gi|134300908|ref|YP_001114404.1| peptide chain release factor 2 [Desulfotomaculum reducens MI-1] gi|134053608|gb|ABO51579.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfotomaculum reducens MI-1] Length = 332 Score = 321 bits (823), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 156/317 (49%), Positives = 213/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W ++ ++ + ++ L + ++ ++ L D ++LEL EE D + +E S L Sbjct: 6 FWDDLTYSQKVSQKLAGLKDRVAAFNTLESSLQDLEVMLELCQEEQDPLLEEEFSSELST 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + +E + E +L+G D DA L +H GAGGTESQDWA MLLRMYTR+ E +K E Sbjct: 66 LTGRLEEMELEIMLAGPYDRGDAILSLHPGAGGTESQDWAQMLLRMYTRYCENHNYKVEI 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L++ G+EAGIKSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+ RRHTSF+S+ V P+ Sbjct: 126 LDLLPGDEAGIKSATIQVTGPNAYGYLRCEKGVHRLVRISPFDAAGRRHTSFASVDVLPL 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD +E+ I D RIDTYRA GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ N+ Sbjct: 186 VDDEVEVNIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQTTNRQ 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A +L++KL +LELQK+E+ + +I WG QIRSYV PY + KD RT E + Sbjct: 246 AAMKLLKSKLIDLELQKKEDEMAALRGEQKDIAWGSQIRSYVFHPYSLAKDHRTGEETGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 + V+DG++ F+ A L Sbjct: 306 VNAVMDGNIGQFVTAYL 322 >gi|114561768|ref|YP_749281.1| peptide chain release factor 2 [Shewanella frigidimarina NCIMB 400] gi|114333061|gb|ABI70443.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella frigidimarina NCIMB 400] Length = 320 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 161/317 (50%), Positives = 221/317 (69%), Gaps = 1/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W A+ L +ER L + I ++ L D LLELA+EEDD + + L+ Sbjct: 1 MWNEPERAQALGKERAALVVVVKTIDDMDTGLEDIQGLLELAIEEDDEETFNDAAAELEE 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + + +F + SG++D+++ YL++ +G+GGTE+QDWANM+LRMY RW + + E Sbjct: 61 LDTRLADLEFRRMFSGKSDASNCYLDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYSPEL 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ DG+ AGIK AT+ G A+GW++ E GVHRLVR SP+DS+ +RHTSF S++VYP Sbjct: 121 MEVTDGDVAGIKGATIKFTGEYAFGWMRTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPE 180 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD IEI+I+ SD RIDTYRASGAGGQHVN TDSA+RITH+PT VVQCQ +RSQHKN+ Sbjct: 181 IDDDIEIDINPSDLRIDTYRASGAGGQHVNKTDSAIRITHLPTNTVVQCQNDRSQHKNRD 240 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A+ L+AKLYELE+ K+ E +K++IGWG QIRSYVL + +KDLRT +E + Sbjct: 241 SAFKQLKAKLYELEMHKQNADKQAAEDAKSDIGWGSQIRSYVLDDAR-IKDLRTGVENRN 299 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F++A+L Sbjct: 300 TQTVLDGDLDKFIEASL 316 >gi|307689287|ref|ZP_07631733.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] Length = 329 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 157/322 (48%), Positives = 221/322 (68%), Gaps = 2/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++ W N+ A+ + + + + I Q + D +L+E+A+EE+D S++ E + Sbjct: 2 QESGFWDNLERAQSVTARAKGIKDRIDLYNNFQSSVEDIKVLIEMAIEENDSSLVTEVYN 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + + VE + E +LSGE D+N+A + +H+G GGT++ DW MLLRMYTRW EK+ F Sbjct: 62 EISTLSDSVENLRLELMLSGEYDTNNAIVTLHSGVGGTDAMDWTEMLLRMYTRWCEKKAF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L++ G+EAGIKSATL + G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 122 NVETLDLQVGDEAGIKSATLKVTGLYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASLE 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + +EI+ SD ++DTYRASGAGGQHVN T+SA+RITHIPTG+VVQCQ ERSQ Sbjct: 182 VTPELRQDQNVEINPSDLKVDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNERSQI 241 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KL EL E +E+I ++ K ++GWG QIRSYV PY MVKD RTN Sbjct: 242 QNRETALNMLKSKLVELKERAHKEKIEDLTGDLK-DMGWGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 I+ V+DG+LD F+K L Sbjct: 301 IQVNDVYKVMDGELDVFIKGYL 322 >gi|323497777|ref|ZP_08102791.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326] gi|323317124|gb|EGA70121.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326] Length = 248 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 148/245 (60%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K Sbjct: 1 MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ S Sbjct: 61 GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|323491501|ref|ZP_08096683.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546] gi|323314255|gb|EGA67337.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546] Length = 248 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 148/245 (60%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ DS+D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K Sbjct: 1 MFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ + Sbjct: 61 GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|323697942|ref|ZP_08109854.1| peptide chain release factor 2 [Desulfovibrio sp. ND132] gi|323457874|gb|EGB13739.1| peptide chain release factor 2 [Desulfovibrio desulfuricans ND132] Length = 372 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 164/346 (47%), Positives = 219/346 (63%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 Q L G D+ RL + + P W N L++E+ L + + + Sbjct: 17 QYESLWGRLDYAETKTRLDAIEKEISKPGAWDNPEALTPLLKEKSQLSTKLEMYDGLSEA 76 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 D LELA E+ D L + + ++ + + ++ + E D DA LE+H GA Sbjct: 77 KDDLDAWLELAQEDPDEESLSALNAQVALLRERLAGTELATMFAFEHDKGDAILEIHPGA 136 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG ESQDWA MLLRMY R+AE++ FK L+ GEEAG+KS TL I+G AYG LKGE Sbjct: 137 GGVESQDWAEMLLRMYYRYAERKGFKVTQLDYQAGEEAGLKSVTLQIEGLFAYGLLKGET 196 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRL+RISP+DS+ RRHTSF+S+ VYP +D++IEIE+ + D RIDT+R+SG GGQ VN Sbjct: 197 GVHRLIRISPFDSSGRRHTSFASVDVYPDMDENIEIEVKDEDLRIDTFRSSGPGGQSVNK 256 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVRITHIPTG+V QCQ E+SQH+NKA A +++A+LYE EL+K EE +K Sbjct: 257 TSSAVRITHIPTGIVAQCQNEKSQHRNKATALRLVKARLYERELKKIEESRRQDYQAKDA 316 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIR+Y LQPY++VKD R+N E + LDGDLD+ ++ L Sbjct: 317 IAWGSQIRTYTLQPYRLVKDHRSNCESGNVDAFLDGDLDEMIRNYL 362 >gi|153952316|ref|YP_001398744.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei 269.97] gi|166223625|sp|A7H5G4|RF2_CAMJD RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|152939762|gb|ABS44503.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei 269.97] Length = 365 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 169/349 (48%), Positives = 228/349 (65%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPKNIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D LQ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDIETLQALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN S Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--SSE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|153207868|ref|ZP_01946445.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177'] gi|165918820|ref|ZP_02218906.1| peptide chain release factor 2 [Coxiella burnetii RSA 334] gi|212219147|ref|YP_002305934.1| peptide chain release factor 2 [Coxiella burnetii CbuK_Q154] gi|120576294|gb|EAX32918.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177'] gi|165917452|gb|EDR36056.1| peptide chain release factor 2 [Coxiella burnetii RSA 334] gi|212013409|gb|ACJ20789.1| bacterial peptide chain release factor 2 [Coxiella burnetii CbuK_Q154] Length = 289 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 213/280 (76%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +L+ +E + ++ + + + ++++ + +F+ + SGE DSN+AYL++ AG+GGTE+Q Sbjct: 1 MAQLSKQEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RW +K F T +E GE AGIKSAT+ G AYGWL+ E GVHRLV Sbjct: 61 DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNKAQA LRAKLYE+E+ K++E + E+SK+EI WG Q Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGNQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + VKDLRT +E ++ VLDGD+D F++A L Sbjct: 241 IRSYVLDASR-VKDLRTGVETSNTQAVLDGDIDLFIEACL 279 >gi|307265609|ref|ZP_07547163.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919407|gb|EFN49627.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1] Length = 330 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 161/323 (49%), Positives = 223/323 (69%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W ++ +++ L ++++ L + + + D L+EL LEE D SI E Sbjct: 3 DPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLEEGDESITDEVDKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + F+ Sbjct: 63 YKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFE 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + V Sbjct: 123 VETIDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ + Sbjct: 183 LPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN E Sbjct: 243 NRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + + + V+DG++D F+ A L K Sbjct: 303 EGNVNAVMDGEIDGFINAYLKQK 325 >gi|110834510|ref|YP_693369.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2] gi|110647621|emb|CAL17097.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2] Length = 356 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 172/348 (49%), Positives = 230/348 (66%), Gaps = 8/348 (2%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ +RL+ + + E P +W + A+ L +ER L+ + I + L D Sbjct: 6 GGIFDYVQKSERLTEVERELESPDVWNDPPYAQALGKERSQLEGVVKTIDDASQGLEDTS 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL+L +EE D L E +L+ ++ V +F + SG+ D AYL++ +G+GGTE+ Sbjct: 66 ALLDLVVEEGDEDTLSEVESDLRDLEKMVADLEFRRMFSGQMDPCSAYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA M+LRMY RW E FKTE +E G+ AGIKSAT+ +G AYGWL+ E GVHRL Sbjct: 126 QDWAEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATVRFEGDYAYGWLRTETGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS++V P VDD I+IEI + R+DTYRASGAGGQHVN TDSAV Sbjct: 186 VRKSPFDSGGRRHTSFSSVFVSPEVDDDIDIEIDLGNMRVDTYRASGAGGQHVNRTDSAV 245 Query: 251 RITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 R+T++ VV QCQ ERSQH+NK +A M++AK+YELE+Q+R E+SK Sbjct: 246 RLTYLFKDDGGTEHTVVTQCQSERSQHQNKDKAMKMMQAKVYELEMQRRNAEKQALENSK 305 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 306 ADIGWGSQIRSYVLDDAR-IKDLRTGVENRNTQAVLDGALDPFIEASL 352 >gi|157960584|ref|YP_001500618.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345] gi|157845584|gb|ABV86083.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345] Length = 293 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 153/280 (54%), Positives = 204/280 (72%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+EE+D + + LQ ++ +E +F + S D++D YL++ +G+GGTE+Q Sbjct: 11 LLELAVEENDEETFNDAAAELQGLEKRLEELEFRRMFSKPHDASDCYLDIQSGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWANM+LRM+ RW E +K E +E+ G+ AGIK AT+ G A+G L+ E GVHRLV Sbjct: 71 DWANMVLRMFLRWGEAHDYKPELIEVTAGDVAGIKGATIKFTGEYAFGSLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+R Sbjct: 131 RKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAIR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E +K++IGWG Q Sbjct: 191 ITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDAKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 251 IRSYVLDDAR-IKDLRTGVENRNTQSVLDGDLDKFIEASL 289 >gi|217077931|ref|YP_002335649.1| peptide chain release factor 2 [Thermosipho africanus TCF52B] gi|226739131|sp|B7IE81|RF2_THEAB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|217037786|gb|ACJ76308.1| peptide chain release factor 2 [Thermosipho africanus TCF52B] Length = 369 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 167/339 (49%), Positives = 239/339 (70%), Gaps = 2/339 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +F +N + L L + D W + +A+ + ++ Q + I +K+I+ + D Sbjct: 23 VFHPENKRKELEELEKQMGDSDFWSDQRKAREISQKAQRIRKIIDDMKDIEAKFEDLDAA 82 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +EL+ ++D S ++ + ++ I+ +V+ + E +L+G+ D+++AYL +H GAGGTESQD Sbjct: 83 IELS--DEDQSFVETIKEMVEEIEKKVKTFELELILNGKFDASNAYLTIHPGAGGTESQD 140 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA+MLLRMY RWAE++ F + ++ GEEAGIKSA + IKG AYG+LK E+GVHRLVR Sbjct: 141 WASMLLRMYMRWAERKGFDVQIVDYQPGEEAGIKSAMIYIKGDYAYGYLKYERGVHRLVR 200 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+N RRHTSF+S+ V P +DD I+IEI+ D RIDTYRASGAGGQ+VN T+SAVRI Sbjct: 201 ISPFDANKRRHTSFASVNVIPEIDDDIDIEINPEDLRIDTYRASGAGGQYVNKTESAVRI 260 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+VV CQ ERSQ +NK A +L+A+LY+LEL+KR++ + +I WG QI Sbjct: 261 THIPTGIVVTCQTERSQLQNKETALKVLKARLYQLELEKRQKQLEEIQGELKDISWGNQI 320 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYV QPY MVKD RTN+E + V+DG++D F+++ L Sbjct: 321 RSYVFQPYTMVKDHRTNVETGNIDAVMDGEIDIFIESEL 359 >gi|167038149|ref|YP_001665727.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166856983|gb|ABY95391.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 330 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/323 (50%), Positives = 221/323 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W ++ +++ L ++++ L + + + D L+EL LEE D SI E Sbjct: 3 DPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVDKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + F+ Sbjct: 63 YKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFE 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + V Sbjct: 123 VETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ + Sbjct: 183 LPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN E Sbjct: 243 NRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L K Sbjct: 303 VGNVQAVMDGEIDGFINAYLKQK 325 >gi|148244437|ref|YP_001219131.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius okutanii HA] gi|146326264|dbj|BAF61407.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius okutanii HA] Length = 364 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 168/330 (50%), Positives = 229/330 (69%), Gaps = 1/330 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL + + EDP++W+N +A+ L RE+ L + +++ L D LL LA E+D Sbjct: 32 RLEEILLEMEDPNIWENPNQAQSLGREKSKLISICQTFEQVNAILEDAQELLNLAQTEND 91 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 ++L + +E +F+ + SG+ D+N AYL++ +G+GGTE+QDWA M+LRMY Sbjct: 92 TETANGIINDLDTAQSSIEKLEFKRMFSGDLDANSAYLDIQSGSGGTEAQDWAEMVLRMY 151 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RW EK FK + +E+ GE AGIKSAT+ KG A+GWL+ E G+HRLVR SP+++N + Sbjct: 152 LRWGEKHNFKIKLMEVSAGEVAGIKSATIHFKGEYAFGWLRTEIGIHRLVRKSPFNANGK 211 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S++V P +D I+I+IS SD RIDTYRASGAGGQHVN T+SAVRITH+PT VV Sbjct: 212 RHTSFCSVFVSPEIDSDIDIDISPSDLRIDTYRASGAGGQHVNKTESAVRITHLPTNTVV 271 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ RSQH NK QA L++KLY+LE+QKR E SK++I WG QIRSY+L + Sbjct: 272 QCQNGRSQHANKNQAIKQLQSKLYKLEMQKRNTEKQSLEQSKSDISWGHQIRSYILDQSR 331 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKDLRT IE ++ ++L+G+LD FMKA+L Sbjct: 332 -VKDLRTGIESSNTQNILEGNLDQFMKASL 360 >gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183] gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183] Length = 378 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 163/354 (46%), Positives = 229/354 (64%), Gaps = 9/354 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D ++ L ++ DP LW + A+ + R +L+N ++ + Sbjct: 12 ELGSTLTGIEAVLDLDAMRAEIAKLREESADPDLWSDQERAQQVTRRLSYLENELNRVTS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D L ELA E DD E L+ ++ +++ + +L+SGE D +A + + Sbjct: 72 LRQRLEDVATLYELAEEMDDADTRAEADAELESLRKDIQQLEVRTLMSGEYDHREALITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +A AGG ++ DWA L RMY RWAE+ + TE E EEAGIKS T +K P AYG L Sbjct: 132 NAQAGGVDAADWAQQLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFAVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GE G HRLVRISP+D+ RR TSF+ + V PVV+ S +E+ E+D RID YR+SG GGQ Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGLDVVPVVEQSDHVEVDENDLRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--- 298 VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A +L+AKL LE +++EE A + Sbjct: 252 GVNTTDSAVRITHIPTGIVVSCQNERSQLQNKATAMAVLKAKL--LERKRQEEAAKMADL 309 Query: 299 -GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GE + + WG QIR+YVL PYQ+VKDLRT +E +P+ VLDG++D+F++A + Sbjct: 310 RGEGTSS---WGTQIRNYVLHPYQIVKDLRTGVESGNPAAVLDGEIDEFIEAEI 360 >gi|289523219|ref|ZP_06440073.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503762|gb|EFD24926.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 355 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 169/349 (48%), Positives = 233/349 (66%), Gaps = 2/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++C G +FD D + L KT P W N +A+ + ++ HL + + ++++ Sbjct: 1 MSC-GKVFDVDTLESEIKALIDKTSSPDFW-NSSDAQKVTQKLSHLQDLLGQWQKMKAEW 58 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + +L EL E +D ++ E D R++ E+ + E LL E D ++A L VHAGAG Sbjct: 59 EELEVLTELLNETEDEELIGEFYDKASRLRKEINSMEMELLLDEEYDESNAILTVHAGAG 118 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++QDWA MLLRMY RWAE+ ++T+ ++I EEAGIK AT+LIKG +YG+LK E+G Sbjct: 119 GLDAQDWAEMLLRMYLRWAERHNYETKVIDILPDEEAGIKYATILIKGICSYGYLKAEKG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+DS+ RRHTSF+SI V P + D +IEI + R++T+RASGAGGQ+VN T Sbjct: 179 IHRLVRISPFDSSKRRHTSFASIEVIPELPDDADIEIRPEEIRMETFRASGAGGQYVNMT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+ HIPTG+VV CQ ERSQH N+ A +L+AKLYE Q+++++ + K EI Sbjct: 239 DSAVRLIHIPTGIVVTCQNERSQHMNRQVAMQLLKAKLYERRQQEKQKMLDDLHGEKKEI 298 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 GWG QIRSYVL PY MVKD RT S VLDGD+DDF+ A L ++K Sbjct: 299 GWGSQIRSYVLHPYTMVKDHRTGYTSYSVDAVLDGDIDDFVIAYLRMRK 347 >gi|221066286|ref|ZP_03542391.1| peptide chain release factor 2 [Comamonas testosteroni KF-1] gi|220711309|gb|EED66677.1| peptide chain release factor 2 [Comamonas testosteroni KF-1] Length = 299 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 156/293 (53%), Positives = 212/293 (72%), Gaps = 1/293 (0%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++++ L DN+ L E++ EE D + L+ ++K +E +F + GEAD + + Sbjct: 4 LEKLTTELADNVELFEMSKEEGDDAGLETIEAETAKLKPLIEELEFRRMFGGEADPLNCF 63 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ AGAGGTE+ DWA+MLLR Y ++AE++ FK E G+ AGIKSAT+ ++G AY Sbjct: 64 IDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKVEGEYAY 123 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L+ E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIEI I+ SD R DTYRASGA Sbjct: 124 GLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDTYRASGA 183 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E Sbjct: 184 GGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQK 243 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E +KT++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 244 LEDTKTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 295 >gi|255004320|ref|ZP_05279121.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Virginia] Length = 255 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 153/249 (61%), Positives = 188/249 (75%), Gaps = 1/249 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK-RKFKTEALEIHDGEEAGI 165 + SGEAD + +L + GAGGTES DWA MLLRMY RWA F TE ++ DGE AG+ Sbjct: 1 MFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIRWAGTFHGFTTEIVDKIDGEAAGL 60 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T+ I G AYGW K E GVHRLVRISP+DS+SRRHTSF+S+ V P+ DD I+IEI E Sbjct: 61 KSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHTSFASVEVSPIADDKIDIEILE 120 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ RSQH+N+A+A+++LR++LY Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQTSRSQHQNRAEAYSLLRSRLY 180 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ELQ++E+ S+ +IGWG QIRSYV+ PY+MVKDLRT E VLDGDLD Sbjct: 181 EMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVKDLRTGHETGDVDAVLDGDLDK 240 Query: 346 FMKATLAIK 354 F+ A L K Sbjct: 241 FIAAALTYK 249 >gi|12642654|gb|AAK00335.1|AF320250_8 RF2 [Lactobacillus delbrueckii] Length = 371 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 166/345 (48%), Positives = 213/345 (61%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GGLFD+DN + + K +P W N +A+ L+ E L ++ L Sbjct: 17 LTTSGGLFDFDNISESIEINEAKMAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LEL E D + ++T D L +++ E + LLSGE D ++A +E+H GAG Sbjct: 77 TDEETALELLRLEADADLQKDTEDQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DW NMLLRMY R+ + R K E G+EAG+KS ++ I G NAYG LK E G Sbjct: 137 GTEAMDWGNMLLRMYQRYCDSRGLKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS RRHTSF+S+ V P VDDSIEI+I D RID YR+SGAGGQH+N T Sbjct: 197 VHRLVRISPFDSAKRRHTSFASVEVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITHIPTG+V Q +RSQ +N+ A N +RAKL+ LE +K+ + + + +I Sbjct: 257 SSAVRITHIPTGIVTTSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDI 316 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV PY MVKD RT E V+DG LD F+ A L Sbjct: 317 AWGSQIRSYVFHPYSMVKDHRTGYETADVGGVMDGKLDPFIYAYL 361 >gi|167470509|ref|ZP_02335213.1| peptide chain release factor 2 [Yersinia pestis FV-1] Length = 248 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 154/245 (62%), Positives = 189/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+K Sbjct: 1 MFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ + Sbjct: 61 SATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QK+ + E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 FEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|15639564|ref|NP_219014.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025803|ref|YP_001933575.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum SS14] gi|6093958|sp|O83585|RF2_TREPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|3322871|gb|AAC65552.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018378|gb|ACD70996.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum SS14] gi|291059953|gb|ADD72688.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum str. Chicago] Length = 368 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 161/341 (47%), Positives = 214/341 (62%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD R++ L P W A+ L+ E + L + + ++ D Sbjct: 16 GGVFDVAAYEARIATLEAAAAAPDFWSERARAEALLAELKTLRATLEPWRALRRESADLR 75 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ELA E D S+ E S I E LL E D DA++ +H+GAGG E+ Sbjct: 76 ALYELAREAQDASLEPELSSLFSDISARFEEASLTRLLHEEVDRLDAFVTIHSGAGGVEA 135 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA ML+RMYTRWAE+R F +++ + E G+KS TL I G +A+G+LKGE GVHRL Sbjct: 136 CDWAQMLMRMYTRWAERRSFCVHIVDLLESE-GGVKSVTLKICGSHAFGFLKGETGVHRL 194 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS +RRHTSF+S +V+PV+DD +E+ I D R+DTYR+ GAGGQHVN TDSAV Sbjct: 195 VRISPFDSAARRHTSFTSTYVFPVLDDHVEVHIRSEDMRVDTYRSGGAGGQHVNKTDSAV 254 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTG+VV CQ ERSQ N+A A ++LRA+LY E QK+++ S K +I WG Sbjct: 255 RITHLPTGIVVTCQNERSQISNRATALSLLRARLYAYERQKKQQEHQRFASEKKDISWGN 314 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV PY MVKD R+ E + V+DG L+ F+++ L Sbjct: 315 QIRSYVFHPYTMVKDHRSKCETGNIHAVMDGALEPFIRSYL 355 >gi|167039139|ref|YP_001662124.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514] gi|166853379|gb|ABY91788.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514] Length = 330 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 162/323 (50%), Positives = 221/323 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W ++ +++ L ++++ L + + + D L+EL LEE D SI E Sbjct: 3 DPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVDKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + F+ Sbjct: 63 YKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFE 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + V Sbjct: 123 VETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ + Sbjct: 183 LPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN E Sbjct: 243 NRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L K Sbjct: 303 VGNVQAVMDGEIDGFINAYLKQK 325 >gi|256750898|ref|ZP_05491782.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus CCSD1] gi|256750233|gb|EEU63253.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus CCSD1] Length = 330 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 162/323 (50%), Positives = 220/323 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP+ W ++ +++ L + ++ L + + + D L+EL LEE D SI E Sbjct: 3 DPNFWNDIKKSQELAKRQKELKELLEEYNSLVTKWEDLSTLIELGLEEGDESITDEVDKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + F+ Sbjct: 63 YKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFE 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + V Sbjct: 123 VETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + + IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ + Sbjct: 183 LPELKNDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN E Sbjct: 243 NRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L K Sbjct: 303 VGNVQAVMDGEIDGFINAYLKQK 325 >gi|154250427|ref|YP_001411252.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1] gi|154154363|gb|ABS61595.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1] Length = 364 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 172/355 (48%), Positives = 249/355 (70%), Gaps = 10/355 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + +F ++ ++L L ++T P W + +A+ + RE Q + + +++ Sbjct: 7 ELKKKYDDIIEVFHPEDKKEKLKELESETLKPDFWNDQKKAQQINREIQRIRRIVEDMEK 66 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV--EYKQFES--LLSGEADSNDA 117 I+ D + +ELA E+D S+ ++L++I EV + ++FE +L+G+ D ++A Sbjct: 67 IKVLFEDIEVGIELA--EEDPSM----QEHLEQIVDEVGEKIREFELALILNGKFDGSNA 120 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YL +H GAGGTESQDWA+MLLRMY RWAE++ F E ++ +GEEAGIKSATL IKG A Sbjct: 121 YLSIHPGAGGTESQDWASMLLRMYMRWAERKGFSVELVDYQEGEEAGIKSATLYIKGDFA 180 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+LK E+GVHRLVRISP+D+N RRHTSF+S+ V P ++D I+IEI D R+DTYRASG Sbjct: 181 YGYLKYERGVHRLVRISPFDANKRRHTSFASVNVLPEIEDDIDIEIRPEDLRVDTYRASG 240 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQ+VN T+SA+RITH+PTG+VV CQ ERSQ +N+ A ML+A+LY+LEL+KR + Sbjct: 241 AGGQYVNKTESAIRITHLPTGIVVTCQTERSQLQNRETAMKMLKARLYQLELEKRRKQIE 300 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + +I WG QIRSYV QPY MVKD RT++E + V+DG++D F++A L Sbjct: 301 QIQGELRDISWGNQIRSYVFQPYTMVKDHRTDVETGNIEAVMDGEIDMFIEAELV 355 >gi|154705875|ref|YP_001424983.1| peptide chain release factor 2 [Coxiella burnetii Dugway 5J108-111] gi|154355161|gb|ABS76623.1| bacterial peptide chain release factor 2 (RF-2) [Coxiella burnetii Dugway 5J108-111] Length = 289 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 159/280 (56%), Positives = 212/280 (75%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +L+ +E + ++ + + + ++++ + +F+ + SGE DSN+AYL++ AG+GGTE+Q Sbjct: 1 MAQLSKQEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RW +K F T +E GE AGIKSAT+ G AYGWL+ E GVHRLV Sbjct: 61 DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNKAQA LRAKLYE+E+ K++E + E SK+EI WG Q Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEVSKSEISWGNQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + VKDLRT +E ++ VLDGD+D F++A L Sbjct: 241 IRSYVLDASR-VKDLRTGVETSNTQAVLDGDIDLFIEACL 279 >gi|289423341|ref|ZP_06425149.1| peptide chain release factor 2 [Peptostreptococcus anaerobius 653-L] gi|289156272|gb|EFD04929.1| peptide chain release factor 2 [Peptostreptococcus anaerobius 653-L] Length = 350 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 164/339 (48%), Positives = 228/339 (67%), Gaps = 4/339 (1%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD D+ R + +N ED W++ A +++E + L + I + +L D +L Sbjct: 3 LFDLDSLKTRQADINASMEDQGFWEDSDHANRILQENKQLTSKIEDYDSLVGQLEDISVL 62 Query: 73 LELALE----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +E+A E E+D +I + + + ++ E L SGE DSN+A L +++G GG Sbjct: 63 IEMAEETSDSEEDKTIEDQLVAYISDVNEKIVNTTMELLFSGEYDSNNAILSINSGTGGL 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ++QDWA MLLRMY RW+E R K + L+I EAGIK+A+L++ G NAYG+LK E+GVH Sbjct: 123 DAQDWAQMLLRMYIRWSEGRGLKVKLLDIISDPEAGIKTASLMVSGVNAYGYLKSEKGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS+ +RHTSF+S+ V P ++D +I I+ +D +IDTYR+SGAGGQHVNTTDS Sbjct: 183 RLVRISPFDSSGKRHTSFASVDVLPEIEDDSDININPNDLKIDTYRSSGAGGQHVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VVQCQ ERSQ NK A ML +KL +++ ++ +E + T+I W Sbjct: 243 AVRITHLPTGIVVQCQNERSQRINKDVAMKMLISKLIQIKEEENKEKIEDLQGKYTQISW 302 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G QIRSYV QPY++VKD RTN E T+ V+DG LDDFM Sbjct: 303 GSQIRSYVFQPYKLVKDHRTNKENTNVDAVMDGSLDDFM 341 >gi|227499885|ref|ZP_03929978.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC 35098] gi|227217994|gb|EEI83267.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC 35098] Length = 333 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 166/335 (49%), Positives = 232/335 (69%), Gaps = 10/335 (2%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-----LEED 80 + K++ P W + +A +M + ++ K++++ + DN+ LL+L EED Sbjct: 1 MEKKSQSPDFWNDSDKASQIMADLSLKKEDLNEYKKLEEGIRDNVDLLDLVELSDNKEED 60 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + ++E+ + L ++ +++ K + LSGE D N+ Y+ ++AGAGG E+ DWA+ML RM Sbjct: 61 TVNAVEESLEALYKLADKMKLK---TQLSGEYDKNNCYISINAGAGGLEATDWADMLFRM 117 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R+ + +K E ++++ E GIKSATL +KGP AYG+LKGE+GVHRLVRISP+DS S Sbjct: 118 YKRYFDNVGYKYELKDLNNEEAGGIKSATLHVKGPYAYGYLKGEKGVHRLVRISPFDSQS 177 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ V+P +DD++EI+I SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV Sbjct: 178 RRHTSFASVDVFPELDDNLEIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVV 237 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q ERSQ +NK A N+L +KL ++ E ++RE+I +I + ++I WG QIRSYV QP Sbjct: 238 ATSQAERSQIQNKQTAMNLLMSKLVQIKEEEQREKIEDI-QGKYSQIAWGSQIRSYVFQP 296 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 Y MVKD RTN E + V+DGDL F+ A LA K Sbjct: 297 YTMVKDHRTNYEMGNVEAVMDGDLQGFIDAYLASK 331 >gi|150021425|ref|YP_001306779.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429] gi|166225118|sp|A6LN93|RF2_THEM4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|149793946|gb|ABR31394.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429] Length = 369 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 153/271 (56%), Positives = 201/271 (74%) Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + L + I+ +V+ + E +L+ + DS++AYL +H GAGGTESQDWA+MLLRM Sbjct: 89 DATFLDTIKQLIDDIERKVKTFELELILNEKFDSSNAYLSIHPGAGGTESQDWASMLLRM 148 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE+R F + ++ GEEAGIKSA L IKG YG+LK E+GVHRLVRISP+D+N Sbjct: 149 YMRWAERRGFDVQIVDYQPGEEAGIKSAMLYIKGEYVYGYLKYERGVHRLVRISPFDANK 208 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ V P ++D I++EI+ D RIDTYRASGAGGQ+VN T+SAVRITHIPTG+V Sbjct: 209 RRHTSFASVNVMPEIEDDIDVEINPEDLRIDTYRASGAGGQYVNKTESAVRITHIPTGIV 268 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V CQ ERSQ +NK A +L+A+LY+LEL+KR++ + +I WG QIRSYV QPY Sbjct: 269 VTCQTERSQLQNKETAMKVLKARLYQLELEKRQKQLEEIQGELKDISWGNQIRSYVFQPY 328 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN+E + V+DGD+D F+++ L Sbjct: 329 TMVKDHRTNVETGNIDAVMDGDIDIFIESEL 359 >gi|225867150|ref|YP_002752528.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus 03BB102] gi|225787101|gb|ACO27318.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus 03BB102] Length = 380 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 170/350 (48%), Positives = 227/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEELHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYL 376 >gi|310822818|ref|YP_003955176.1| peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1] gi|309395890|gb|ADO73349.1| Peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1] Length = 380 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 157/341 (46%), Positives = 228/341 (66%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD D R+S ++ + P+ W + +A+ L++E+ L+ ++ + L D Sbjct: 27 GGIFDLDRKRSRISLIDRDSTLPNFWDDNTKAQALLKEKSTLEASVGAFDKALRGLDDAQ 86 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+ELA E +D + QE L ++ ++ + +LSGE D ++ +++++AGAGGT+S Sbjct: 87 TLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRSNCFMDINAGAGGTDS 146 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA ML+RMYTR+ E+R ++ E ++ GEEAG K+ +L I+G AYG+LK E GVHRL Sbjct: 147 MDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYAYGYLKAEVGVHRL 206 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D + R GAGGQ VN T S Sbjct: 207 VRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGGQKVNKTSSTA 266 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 ++ H+PT +++ CQ ERSQ NK A+ +LRA+LYELEL+KRE + E+ K +I +G Sbjct: 267 QLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERDAAEAQKKDISFGS 326 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL PY+MVKDLRT +E + VLDGDL+ F+ A L Sbjct: 327 QIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 367 >gi|257457828|ref|ZP_05622987.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580] gi|257444541|gb|EEV19625.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580] Length = 363 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 168/349 (48%), Positives = 228/349 (65%), Gaps = 6/349 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEI 62 L GG+FD + +R++ W + +A+ L+ E + L N I + I +I Sbjct: 2 LTKFGGVFDSEAVKKRIAEKEAVAGQEGFWNDPKKAEKLLTEIKKLKNRIEPWETLIADI 61 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +D L L + A + D+ +QE +L+ ++ E +LLS E D +DA+L VH Sbjct: 62 ED-LQTLYELTQEAGDADNADSVQEIDMSLKELQERFEKLNTLALLSDEVDGSDAFLTVH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY RWAE+R F E L+ + +E G+KS TL I+G AYG+LK Sbjct: 121 AGAGGTEACDWAQMLTRMYLRWAERRGFSVETLDELEADE-GLKSITLQIRGDYAYGFLK 179 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRL+RISP+D+N+RRHTSFSS++V+PV+DD+IE+ I D R+DTYRA GAGGQH Sbjct: 180 AETGVHRLIRISPFDANARRHTSFSSVYVFPVLDDTIEVNIRPEDLRVDTYRAGGAGGQH 239 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVR+TH+PTG+VV CQ ERSQ N+A A +ML+A+LYE ++E+ + Sbjct: 240 VNKTDSAVRLTHLPTGIVVACQNERSQISNRATAMSMLKARLYEYYRNEKEKENAKFAAE 299 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K I WG QIRSY+ QPY MVKD RT E + V+DGD+D F++ L Sbjct: 300 KKGISWGNQIRSYIFQPYTMVKDHRTKHETGNIQAVMDGDIDGFIEDFL 348 >gi|197335699|ref|YP_002155207.1| peptide chain release factor 2 [Vibrio fischeri MJ11] gi|197317189|gb|ACH66636.1| peptide chain release factor 2 [Vibrio fischeri MJ11] Length = 248 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 148/245 (60%), Positives = 192/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K Sbjct: 1 MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ S Sbjct: 61 GATVRIAGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E +K++IGWG QIRSYVL + +KDLRT IE + VLDGDLD F Sbjct: 181 YELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|239623407|ref|ZP_04666438.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522373|gb|EEQ62239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 338 Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 160/324 (49%), Positives = 220/324 (67%), Gaps = 6/324 (1%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W N ++ ++RE ++L + + +E++ D +++++ EE+D S++ E + Sbjct: 2 EEPGFWDNPEKSTRMVREAKNLKDEVETFRELEQEYEDIQVMIQMGYEENDASLIPEIEE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L +E + + LLSGE DSN+A L ++AGAGGTES DW +ML RMY RWAEK+ F Sbjct: 62 MLGHFSDTLEKMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 KTE L+ DG+EAGIKS T+ I G NAYG+L+ E GVHRLVRISP+++ +R TSF S Sbjct: 122 KTEVLDFLDGDEAGIKSVTVQINGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P + + I+IEI+ D RIDTYR+SGAGGQH+N T SA+RITH P+G VV CQ ERSQ Sbjct: 182 IMPDIQEDIDIEINPDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGTVVTCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLR 327 +NK +A ML++KL+ L K+EE A + ++ GWG QIRSYVLQPY MVKD R Sbjct: 242 QNKDKAMQMLKSKLF---LLKQEEQAAKAAGIRGDVKDNGWGSQIRSYVLQPYTMVKDHR 298 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T E + VLDG++D F+ A L Sbjct: 299 TGEESGNVDAVLDGNIDSFISAYL 322 >gi|157693929|ref|YP_001488391.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032] gi|157682687|gb|ABV63831.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032] Length = 327 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 164/320 (51%), Positives = 216/320 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + +A+ ++ E L + ++ E+ + + + +L E+ D + E L+ Sbjct: 6 FWNDQQKAQGVINEANALKDNVNAYHELSESHEELQMTHDLLKEDYDEELHVELEKELKN 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R FK E Sbjct: 66 LTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 LDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVMPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 ++ I+I+I D ++DTYRASGAGGQHVNTTDSAVRITHIPT VVV CQ ERSQ KN+ Sbjct: 186 FNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVVTCQTERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 +A ML++KLY+ +++++ + + EIGWG QIRSYV PY +VKD RTN E + Sbjct: 246 RAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEMGN 305 Query: 335 PSDVLDGDLDDFMKATLAIK 354 V+DGDLD F+ A L K Sbjct: 306 VQAVMDGDLDSFIDAYLRSK 325 >gi|227328400|ref|ZP_03832424.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 248 Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 153/245 (62%), Positives = 188/245 (76%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG K Sbjct: 1 MFSGQYDSADCYLDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ + Sbjct: 61 SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 FEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|219670742|ref|YP_002461177.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2] gi|219541002|gb|ACL22741.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2] Length = 368 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 162/332 (48%), Positives = 226/332 (68%), Gaps = 3/332 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 ++S L + + P W N A+ +M+E + + +Q +L D L L ++A+EE D Sbjct: 31 KISILEIELQRPDFWDNPEGAQKVMQELSYQQEKVKTYYTLQQQLDDMLTLYQMAVEEKD 90 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 S+ E + + ++ ++ + E LLSG D N+A + +HAGAGGTE+QDW +ML RMY Sbjct: 91 ESLEPELEEGILALQQRLDGLELEILLSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMY 150 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+ E+ +K E ++ G+EAGIKSATL G NA+G+LK E+GVHRLVRISP+D++ R Sbjct: 151 IRYGERHGYKVETMDFLPGDEAGIKSATLSFAGENAFGYLKAEKGVHRLVRISPFDASGR 210 Query: 202 RHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RHTSF+S+ V P V++D+ EI+I D ++DTYRASGAGGQHVN T SAVRITH+PTG+V Sbjct: 211 RHTSFASVDVIPEVMEDNAEIQIPPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIV 270 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQP 319 VQ Q ERSQ +N+A +L+AKL EL+ +++E EI+ I + EI WG QIRSYV P Sbjct: 271 VQSQSERSQIQNRAYCLRILQAKLLELKRKQQEDEISEI-RGEQQEIAWGSQIRSYVFHP 329 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y MVKD RTN E + V+DG++D F+ A L Sbjct: 330 YNMVKDHRTNEETANTGAVMDGEIDQFIAAYL 361 >gi|323489912|ref|ZP_08095134.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2] gi|323396419|gb|EGA89243.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2] Length = 327 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 169/323 (52%), Positives = 214/323 (66%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W N A+ ++ E L ++ + + + LEL EEDD + ++ + Sbjct: 3 DPDFWNNQETAQTVISELNGLKEVVNAYYSFMETQENMEMSLELLREEDDEDLHEDVDKD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +++ ++ + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK Sbjct: 63 MKQFISDLADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEKRGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAG+KS TL I+G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH PTG VV CQQERSQ K Sbjct: 183 MPEFTGEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHAPTGAVVTCQQERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY L++++ E + EIGWG QIRSYV PY MVKD RTN E Sbjct: 243 NREKAMQMLKAKLYALKIEEEEARLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGD+D F+ + L K Sbjct: 303 TGNLGAVMDGDIDGFINSLLRSK 325 >gi|293375591|ref|ZP_06621865.1| peptide chain release factor 2 [Turicibacter sanguinis PC909] gi|325836763|ref|ZP_08166230.1| peptide chain release factor 2 [Turicibacter sp. HGF1] gi|292645808|gb|EFF63844.1| peptide chain release factor 2 [Turicibacter sanguinis PC909] gi|325491141|gb|EGC93430.1| peptide chain release factor 2 [Turicibacter sp. HGF1] Length = 365 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 162/318 (50%), Positives = 213/318 (66%), Gaps = 2/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + +A+ ++ + + ++ ++ + + + EL LEE D + E ++ Sbjct: 45 FWDDQRKAQEVINAANAIKDKVNTFYSLEGEVEELAVAFELILEEPDADLQAELESQIEE 104 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + + + E LLSG D+N+A LE+H GAGGTESQDWA ML RMYTR+AE++ FK E Sbjct: 105 VSEHLNKFELEILLSGPYDANNAILELHPGAGGTESQDWAEMLYRMYTRYAERKGFKIEV 164 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+ GEEAGIKS T+ IKG NA+G+ K E+GVHRLVRISP+DS RRHTSF S V P Sbjct: 165 LDYLVGEEAGIKSVTIKIKGTNAFGYFKAERGVHRLVRISPFDSGGRRHTSFCSCDVMPE 224 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 I+IEI D +IDTYRASGAGGQH+NTTDSAVRITHIPT +V CQ +RSQ KN+ Sbjct: 225 FSGDIDIEIRAEDLKIDTYRASGAGGQHINTTDSAVRITHIPTNTIVTCQNQRSQIKNRE 284 Query: 275 QAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML++KLY+ +L+++E E+A I K EIGWG QIRSYV PY +VKD RT+ E Sbjct: 285 AAMEMLKSKLYQRKLEEQEAELAKIRGEVK-EIGWGSQIRSYVFHPYSLVKDHRTSYEVG 343 Query: 334 SPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 344 NVQSVMDGDLDGFIDAYL 361 >gi|154483104|ref|ZP_02025552.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC 27560] gi|149735912|gb|EDM51798.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC 27560] Length = 286 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 156/277 (56%), Positives = 202/277 (72%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + EE+D SI++E + E E + E+LLSGE D N+A ++++AGAGGTES DWA Sbjct: 1 MGEEENDASIVEEVEQETKEFIDEFEKTKIETLLSGEYDKNNAIVKINAGAGGTESCDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +ML RMYTRWAE + +KTE L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRIS Sbjct: 61 SMLYRMYTRWAESKGYKTEVLDFLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SAVRITH Sbjct: 121 PFNAAGKRQTSFASCDVMPDIEEDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 PTG+VVQCQ ERSQ +NK +A ML+AKLY L+ Q+ EE + EIGWG QIRS Sbjct: 181 NPTGIVVQCQNERSQLQNKDKAMKMLKAKLYVLKKQEEEEKRSGIRGEIKEIGWGSQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YV+QPY MVKD RTN E T V+DG +D F+ A L Sbjct: 241 YVMQPYTMVKDHRTNQEITDVGKVMDGYIDPFINAYL 277 >gi|327395061|dbj|BAK12483.1| peptide chain release factor 2 PrfB [Pantoea ananatis AJ13355] Length = 293 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 160/280 (57%), Positives = 207/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LL+LA+E DD E L ++ ++ +F + SGE DS D Y+++ AG+GGTE+Q Sbjct: 11 LLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ E GVHRLV Sbjct: 71 DWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E +K++IGWG Q Sbjct: 191 ITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNKSDIGWGSQ 250 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 251 IRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASL 289 >gi|310659612|ref|YP_003937333.1| prfb [Clostridium sticklandii DSM 519] gi|308826390|emb|CBH22428.1| PrfB [Clostridium sticklandii] Length = 328 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 159/322 (49%), Positives = 226/322 (70%), Gaps = 6/322 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W V +A+ M++ + +++ + ++ L D +L ELA ++D S+ +E Sbjct: 3 EPEFWNEVEKAQQTMQKNKVIEDKLEQFASLESELEDAFVLFELA--DEDASLEKELHSA 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ +++ + +LLSG+ D N+A + +HAG+GG ++QDW MLLRMY R+A+ F+ Sbjct: 61 LNSLEEKIDELKIATLLSGQYDMNNAIVSIHAGSGGLDAQDWTKMLLRMYDRFAQSMGFR 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 L++ EAGIKS TL I+G NAYG+LK E+GVHR+VRISP+D++ +RHTSF+S+ V Sbjct: 121 VIELDMIADPEAGIKSVTLKIEGANAYGYLKSEKGVHRIVRISPFDTSGKRHTSFASVDV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DDSIEI+I+ +D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ +RSQH Sbjct: 181 IPELDDSIEIDINPADLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQNQRSQHS 240 Query: 272 NKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A ML AKL EL EL+ +++I ++ GE S +I WG QIRSYV QPY MVKD RTN Sbjct: 241 NKETAMKMLMAKLIELKELEHKDKIEDLQGEYS--QISWGSQIRSYVFQPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DG++ F+ A L Sbjct: 299 TEIGHVQSVMDGNIMPFINAYL 320 >gi|302391071|ref|YP_003826891.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium arabaticum DSM 5501] gi|302203148|gb|ADL11826.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium arabaticum DSM 5501] Length = 366 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 165/338 (48%), Positives = 232/338 (68%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D ++ L + P W + A+ + +E L + + +++RL + +L+ Sbjct: 23 LDYDKLEEKHDQLRAEMSKPGFWDDSSRAQQISKEASALKDMMESFDRLEERLEEIEVLI 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EEDD S+ +E D LQ ++ ++E + + ++ GE D N A L ++ GAGG +SQDW Sbjct: 83 ELGQEEDDDSVTEEIKDKLQGLEEDIEELELKVVMDGEYDQNSALLSINPGAGGIDSQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAEK+ ++ E LE GEEAGIKS TL I GP AYG+LK E+GVHR+VR+ Sbjct: 143 AEMLLRMYNRWAEKKDYQIETLEFMAGEEAGIKSVTLQINGPYAYGYLKAEKGVHRMVRV 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS+ RRHTSF+S+ V P ++D I+I+I ++D +I+TYRASGAGGQHVNTTDSAVRIT Sbjct: 203 SPFDSSGRRHTSFASVEVLPEIEDDIDIDIEKNDLKIETYRASGAGGQHVNTTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ RSQHKN+ +A +L+AKL++ +K+ E + K +I WG QIR Sbjct: 263 HQPTGIVVQCQSLRSQHKNRQKAMQILKAKLFDYMKEKQAEKLSEIRGEKKDISWGSQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SY PYQ++KD RTN+E + V+DG+LD ++A L Sbjct: 323 SYFFDPYQLIKDHRTNLEINNIEAVMDGELDPLIEAYL 360 >gi|260655334|ref|ZP_05860822.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1] gi|260629782|gb|EEX47976.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1] Length = 348 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 165/342 (48%), Positives = 219/342 (64%), Gaps = 1/342 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD + ++ L ++ DP W + +AK + + L++++ ++ D + Sbjct: 8 FDPEGLRRQADELRLRSSDPAFW-STGDAKEVSSQLSRLESSLEHWDHLERMFSDLETMA 66 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL +DD + E EVE++Q + LLS DS DA + +HAG+GG +SQDW Sbjct: 67 ELLEIDDDPELAAEFDAKSGEYSREVEHRQMDLLLSEAYDSRDAIVTIHAGSGGLDSQDW 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY RW E+ +KT L++ EEAG+KS T + G AYG+LK E GVHRLVRI Sbjct: 127 AEMLYRMYLRWCEENGYKTRLLDLQQDEEAGLKSVTFTVSGSCAYGYLKSETGVHRLVRI 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+N RRHTSFS + V P + D +E+ I + D RIDTYR+SGAGGQHVN TDSAVRIT Sbjct: 187 SPFDTNKRRHTSFSGVVVSPQLPDDVEVAIRDEDLRIDTYRSSGAGGQHVNMTDSAVRIT 246 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+PTG+VV CQ ERSQH NKA A +LR+KLY+L++Q R + + K E WG QIR Sbjct: 247 HLPTGIVVSCQNERSQHMNKATAMQVLRSKLYDLQVQNRRQELDDLAGEKKESSWGHQIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 SYVLQPY +VKD RT E + + VLDGDLD F+ A L +K Sbjct: 307 SYVLQPYTLVKDHRTGEETGNVAAVLDGDLDRFILAYLRWRK 348 >gi|253580007|ref|ZP_04857274.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39B_FAA] gi|251848526|gb|EES76489.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39BFAA] Length = 343 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 160/341 (46%), Positives = 229/341 (67%), Gaps = 3/341 (0%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N Q++ L + E P W + ++ M+E + + + + + + ++ D ++E+ Sbjct: 3 NKEQKVEELEREMEAPDFWDDAEVSQKKMKELKDMKDDMETYQNLVTQMEDMETMIEMGY 62 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE+D +++ E + L + + + + ++LLSGE DS +A ++++AGAGGTE+ DW ML Sbjct: 63 EENDPALIPEIQEMLDEFQKDFDNIRIKTLLSGEYDSENAIIKLNAGAGGTEACDWCGML 122 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+RWA+K+ F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP++ Sbjct: 123 YRMYSRWADKKGFTLEVLDYLDGDEAGIKSVTFQVNGTNAYGYLKSEKGVHRLVRISPFN 182 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + +R TSF S V P + +++EI++ + RIDTYR+SGAGGQH+N T SA+RITH PT Sbjct: 183 AAGKRQTSFVSCDVMPDIKKDLDVEINDDEIRIDTYRSSGAGGQHINKTSSAIRITHYPT 242 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ ERSQH NK +A ML+AKLY L+ Q+ EE + T+IGWG QIRSYV+ Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVM 302 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL---AIKK 355 QPY MVKD RTN E + VLDG +D F+ A L A+KK Sbjct: 303 QPYTMVKDHRTNEETGNVDAVLDGGIDIFINAYLKWIALKK 343 >gi|325679774|ref|ZP_08159348.1| peptide chain release factor 2 [Ruminococcus albus 8] gi|324108589|gb|EGC02831.1| peptide chain release factor 2 [Ruminococcus albus 8] Length = 378 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 154/349 (44%), Positives = 233/349 (66%), Gaps = 11/349 (3%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L ++D +NA +++ L+ K +P W + ++++++++ ++L+ + + D Sbjct: 23 LHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAADDI 82 Query: 70 LILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +++E+A EED+ +++E L ++K +++ E+LL+GE D ++A L HAGAG Sbjct: 83 EVMIEMAGEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHAGAG 142 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW ML+RMYT+WA+ F + ++I +G +AGIKS ++ I+G NAYG+LK E G Sbjct: 143 GTEAQDWTEMLIRMYTKWADSHGFNAKIMDILEGGDAGIKSCSMFIEGENAYGYLKSESG 202 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+DS+ RHTSFS++ V P +DD+IE+EI D ++ YRASGAGGQH+N T Sbjct: 203 IHRLVRISPFDSSGSRHTSFSAVEVMPELDDNIEVEIRPEDIEMEVYRASGAGGQHINKT 262 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE----LQKREEIANIGESS 302 SAVR+ H PTG+V CQ +RSQ +N+ A ML+AKL E++ L+K E+I + Sbjct: 263 SSAVRLIHKPTGIVTACQTQRSQFQNRDYAMKMLKAKLIEIKEREHLEKIEDIKGV---- 318 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EI WG QIRSYV PY +VKDLRT E + V+DGDLD F+ A L Sbjct: 319 QKEIAWGSQIRSYVFMPYTLVKDLRTGYEYNNVKAVMDGDLDGFINAYL 367 >gi|257867488|ref|ZP_05647141.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30] gi|257873817|ref|ZP_05653470.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10] gi|257801544|gb|EEV30474.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30] gi|257807981|gb|EEV36803.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10] Length = 329 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 155/277 (55%), Positives = 198/277 (71%) Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE D + E + ++ ++ + LL D N+A +E+H GAGGTESQDW +ML Sbjct: 49 EEADPEMEAELEARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSML 108 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 LRMYTR+ E+ ++ E L+ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D Sbjct: 109 LRMYTRFCEQHGYQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFD 168 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S RRHTSF S+ V P +D +I++EI+ D +IDTYRASGAGGQH+N T+SAVRITHIPT Sbjct: 169 SAKRRHTSFCSVDVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPT 228 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G VV Q +RSQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV Sbjct: 229 GTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVF 288 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLD F+ A L +K Sbjct: 289 HPYSMVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|257877567|ref|ZP_05657220.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20] gi|257811733|gb|EEV40553.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20] Length = 329 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 155/277 (55%), Positives = 198/277 (71%) Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE D + E + ++ ++ + LL D N+A +E+H GAGGTESQDW +ML Sbjct: 49 EEADPEMEAELEARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSML 108 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 LRMYTR+ E+ ++ E L+ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D Sbjct: 109 LRMYTRFCEQHGYQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFD 168 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S RRHTSF S+ V P +D +I++EI+ D +IDTYRASGAGGQH+N T+SAVRITHIPT Sbjct: 169 SAKRRHTSFCSVDVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPT 228 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G VV Q +RSQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV Sbjct: 229 GTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVF 288 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLD F+ A L +K Sbjct: 289 HPYSMVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|218961845|ref|YP_001741620.1| Protein chain release factor B [Candidatus Cloacamonas acidaminovorans] gi|167730502|emb|CAO81414.1| Protein chain release factor B [Candidatus Cloacamonas acidaminovorans] Length = 340 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 158/326 (48%), Positives = 221/326 (67%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K P W++ +AK + ++ L + + +K++ + L L E+ + +L Sbjct: 5 LEQKMNAPDFWEDQTQAKKISKQLSQLRDELEHLKKLDTVKGELETYLTLLDEDFNAELL 64 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L RI+ +E + E L+ + D NDA L +H+GAGGTESQDWA MLLRMY WA Sbjct: 65 AEAVSELPRIQSFIEKAEIECYLNDKYDHNDALLTIHSGAGGTESQDWAEMLLRMYAHWA 124 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK + + ++ GEEAG+KS ++ IKG AYG LK E GVHRLVRISP+++ +R TS Sbjct: 125 EKNDYSFDIIDSLPGEEAGLKSVSVEIKGDYAYGMLKSEIGVHRLVRISPFNAQGKRQTS 184 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S++VYP D+ +EIEI+ D +IDT+RASGAGGQ+VNTTDSAVRITH+PT + V CQ Sbjct: 185 FASVFVYPEFDEDLEIEINPKDLKIDTFRASGAGGQYVNTTDSAVRITHLPTNITVTCQN 244 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ +N+ +A ++L+++LY+ ++RE+ E+SKTEIGWG QIRSYV PYQM+KD Sbjct: 245 ERSQMQNREKAMSILKSRLYQYYEEQREKEKKNLENSKTEIGWGNQIRSYVFHPYQMIKD 304 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RTN E + V++GDL+DF+ A L Sbjct: 305 HRTNYETGNVDKVMNGDLNDFIYAWL 330 >gi|264679119|ref|YP_003279026.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2] gi|262209632|gb|ACY33730.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2] Length = 299 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 156/293 (53%), Positives = 211/293 (72%), Gaps = 1/293 (0%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++++ L DN L E++ EE D + L+ ++K +E +F + GEAD + + Sbjct: 4 LEKLTTELADNSELFEMSKEEGDDAGLETIEAETAKLKPLIEELEFRRMFGGEADPLNCF 63 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ AGAGGTE+ DWA+MLLR Y ++AE++ FK E G+ AGIKSAT+ ++G AY Sbjct: 64 IDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKVEGEYAY 123 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L+ E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIEI I+ SD R DTYRASGA Sbjct: 124 GLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDTYRASGA 183 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E Sbjct: 184 GGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQK 243 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E +KT++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 244 LEDTKTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 295 >gi|153956213|ref|YP_001396978.1| peptide chain release factor 2 [Clostridium kluyveri DSM 555] gi|219856538|ref|YP_002473660.1| hypothetical protein CKR_3195 [Clostridium kluyveri NBRC 12016] gi|146349071|gb|EDK35607.1| PrfB [Clostridium kluyveri DSM 555] gi|219570262|dbj|BAH08246.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 328 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 156/322 (48%), Positives = 221/322 (68%), Gaps = 2/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W ++ A+ + E ++L+ ++ + + D ILLE+ EE+D QE Sbjct: 2 QEPNFWNDIDNAQKIASEEKNLEGRLNRYDLLSHNIEDARILLEIIKEEEDSMSFQEVMK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 +++ I+ +VE + E LL GE D N+A L +H G GGT++QDW MLLRMY RWAEK + Sbjct: 62 DIKDIEFQVEIFRTEILLCGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYIRWAEKMGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K +++ + E+AGIKS +L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 122 KVNIIDMLEAEDAGIKSVSLSIIGEFAYGYLKSEKGIHRLVRISPFNANGKRQTSFASVE 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + +IEI D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQH Sbjct: 182 VLPELTGDQDIEIRSEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK QA +L+AKL EL E ++ I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 242 YNKEQALKILKAKLVELKERAHKDRIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E ++ S V+DGD+D+F+K L Sbjct: 301 VESSNVSSVMDGDIDNFIKGYL 322 >gi|331003438|ref|ZP_08326937.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412484|gb|EGG91873.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str. F0167] Length = 337 Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 158/322 (49%), Positives = 223/322 (69%), Gaps = 2/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W + E+ ++RE + L + + +++ D +L+E+ EE+D S++ E Sbjct: 2 EEPTFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYEENDESLIPEIEA 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L+ E++ + +LL+GE D A ++++AGAGGTES DW +ML RMYTRWA K + Sbjct: 62 MLEEFTKEIDALKIATLLTGEYDDASAIMKLNAGAGGTESCDWCSMLYRMYTRWAAKEGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + L+I DG+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+++ +R TSF S Sbjct: 122 TVDVLDILDGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P +++ ++++I+ D RIDTYR+SGAGGQH+N T SA+RITHIPTGVVVQCQ ERSQ Sbjct: 182 IMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKL+ L+ Q E++++I K +IGWG QIRSYV+QPY MVKD RT Sbjct: 242 QNKDKAMQMLKAKLFMLKQQANVEKLSDIRGDVK-DIGWGNQIRSYVMQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + S V+DGD+D F+ A L Sbjct: 301 AESGNVSAVMDGDIDKFIIAYL 322 >gi|326389631|ref|ZP_08211197.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW 200] gi|325994346|gb|EGD52772.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW 200] Length = 330 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 161/323 (49%), Positives = 221/323 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W ++ +++ L ++++ L + + + D L+EL L+E D SI E Sbjct: 3 DPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLDEGDESITDEVDKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + F+ Sbjct: 63 YKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFE 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + V Sbjct: 123 VETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ + Sbjct: 183 LPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN E Sbjct: 243 NRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L K Sbjct: 303 VGNVQAVMDGEIDGFINAYLKQK 325 >gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX] gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida fusca YX] Length = 375 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 163/352 (46%), Positives = 229/352 (65%), Gaps = 5/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ L + + D D + L ++ DP LW + A+ + R L++ +S ++ Sbjct: 12 ELTSTLENIEAVLDLDAKRTEIEQLREQSADPELWNDQANAQKVTRRLSFLESEVSKVEN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ R+ D +L ELA E+D L E L ++ ++ + +LLSG D +A + + Sbjct: 72 IRSRIDDLGVLFELAAAENDAETLAEARRELAALRKDISDLEVRTLLSGPYDEREALISI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +A AGG ++ DW ML RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 132 NAQAGGVDAADWTQMLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGML 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GE G HRLVRISP+D+ SRR TSF+ + V PVV+ S IEI ES+ RID YR+SG GGQ Sbjct: 192 RGEHGTHRLVRISPFDNQSRRQTSFAGVDVVPVVEQSDHIEIDESELRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-G 299 VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A ++L+AKL E + Q+ E E+A + G Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMSILQAKLLERKRQEEEAELAALRG 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ES++ WG Q+R+YVL PYQ VKD+RT +E + S VLDG++D+F+ A + Sbjct: 312 ESAR---AWGTQMRNYVLHPYQSVKDIRTGVETGNTSAVLDGEIDEFINAGI 360 >gi|269123112|ref|YP_003305689.1| peptide chain release factor 2 [Streptobacillus moniliformis DSM 12112] gi|268314438|gb|ACZ00812.1| bacterial peptide chain release factor 2 (bRF- 2) [Streptobacillus moniliformis DSM 12112] Length = 362 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 172/327 (52%), Positives = 230/327 (70%), Gaps = 14/327 (4%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSILQE 87 +D + QNV++ L++ER IK+I L N ILLE +E+ S+ + Sbjct: 47 KDQNKSQNVLKEISLLKER---------IKDISKLLTLNENIQILLEFYKQEE-ISLEEL 96 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ L+ IK E++ + + LL+G+ D N A L ++AGAGGTES DW +ML RMY RWA + Sbjct: 97 ETETLEFIK-ELDKFKIKLLLNGKYDKNSAILTINAGAGGTESCDWVSMLYRMYDRWAMQ 155 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 KFK E L+I G+EAGIKS TL IKG AYG+L E+GVHRLVRISP+DSN+RRHTSF+ Sbjct: 156 NKFKVEVLDILAGDEAGIKSITLSIKGDYAYGYLDCEKGVHRLVRISPFDSNARRHTSFA 215 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P ++D +E+ + + D +IDTYRASGAGGQHVNTTDSAVRITHIPTG+VV CQ ER Sbjct: 216 AVNVIPEIEDDVEVNLKKEDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVICQNER 275 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ+KN A +LRAKL+E+EL+ RE N + +++I WG QIRSYV QPY+MVKD R Sbjct: 276 SQNKNLNSAMKVLRAKLFEIELKNRENEINDLKGVQSKIEWGSQIRSYVFQPYKMVKDHR 335 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E+ + V+DGD++ F+ L I+ Sbjct: 336 TNHEENNVDKVMDGDINIFIDEYLKIR 362 >gi|303327864|ref|ZP_07358304.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3] gi|302862225|gb|EFL85159.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3] Length = 366 Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 159/340 (46%), Positives = 218/340 (64%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GG+FD ++ QRL + T+ P W +++E++ L++ + + ++ Sbjct: 14 LTTFGGVFDVASSEQRLRDIETELSRPGAWDKPEALTPVLQEKRRLEDEVGRLTRLKTCR 73 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L LA E +D L+ + + ++ + LLS E D DA LE+H GAG Sbjct: 74 DDMEEWLVLASENEDQEALESLEQQQKELAALLDETELVMLLSAEEDGQDAILEIHPGAG 133 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA MLLR+YTRWA +RK+ E ++ G+EAGIKS TL I GP+A+G+LK E+G Sbjct: 134 GTESQDWAEMLLRLYTRWAARRKYAVEEMDFLPGDEAGIKSVTLRISGPHAFGFLKSERG 193 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRL+RISP+D++ RRHTSF+S+ V P + I+++I ESD R D +R+SG GGQ VNTT Sbjct: 194 IHRLIRISPFDASGRRHTSFASVDVIPDAGNDIQLDIKESDLRFDIFRSSGPGGQSVNTT 253 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+ QCQ E+SQH NK A +LRA+LY LELQKRE + K I Sbjct: 254 SSAVRVTHLPTGISAQCQNEKSQHHNKETALRVLRARLYNLELQKREAERQAEYAGKDAI 313 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +G QIR+Y LQPY++VKD RT E VLDG +D F Sbjct: 314 AFGSQIRTYTLQPYRLVKDHRTGSESGDVDAVLDGQIDQF 353 >gi|281185482|sp|Q0TNE1|RF2_CLOP1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|255529900|gb|ABG84933.2| peptide chain release factor 2, programmed frameshift [Clostridium perfringens ATCC 13124] Length = 362 Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 158/327 (48%), Positives = 225/327 (68%), Gaps = 3/327 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K ++ W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D Sbjct: 36 LELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETA 94 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW Sbjct: 95 KEIISEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWC 154 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK+ + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TS Sbjct: 155 EKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 214 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ Sbjct: 215 FASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQN 274 Query: 266 ERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ N+ A ML++KL EL E +E+I ++ K ++GWG QIRSYV PY MVK Sbjct: 275 ERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVK 333 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D RTN+E ++ + V+DGD+D+F+ A L Sbjct: 334 DHRTNVETSNVNGVMDGDIDNFIIAYL 360 >gi|282891215|ref|ZP_06299718.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498908|gb|EFB41224.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 341 Score = 318 bits (815), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 157/330 (47%), Positives = 219/330 (66%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 ++ L T+ E P W + A+ ++ E L ++++R + LL+ A + + Sbjct: 7 KVKALETEMEAPTFWDDNDAAQKVIAECNALKAWTIPYHDLKERYSNVSELLQEAFDLGE 66 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 S++QE + L I+ ++ + +L+GE DS +A+L ++AGAGGTE+ DW ML RMY Sbjct: 67 ESLIQELVEELDSIEASLKELEIRKMLAGELDSKNAFLSINAGAGGTEACDWVLMLSRMY 126 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RWA K+ +K E ++ DG+ AGIKS T GP AYG+ K E+GVHRLVRISP+DSN++ Sbjct: 127 QRWAAKKNWKVEVIDTVDGDVAGIKSITYKFTGPFAYGYAKAEKGVHRLVRISPFDSNAK 186 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF+S+ + P + D I+IEI D R+DT+RASGAGGQHVN TDSAVR+TH+PTG+VV Sbjct: 187 RHTSFASVDITPEITDDIQIEIRPEDLRVDTFRASGAGGQHVNRTDSAVRLTHLPTGIVV 246 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ +RSQ +NK + MLR+KLYE+E+ RE K EI WG QIR+YV QPY Sbjct: 247 SCQAQRSQLQNKETCYKMLRSKLYEMEVTARENALKAMGGEKKEIAWGSQIRNYVFQPYT 306 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +VKD RT +E + V+DG+LDDF+ A L Sbjct: 307 LVKDTRTKVECGNIQAVMDGELDDFVNAYL 336 >gi|28210088|ref|NP_781032.1| peptide chain release factor 2 [Clostridium tetani E88] gi|28202524|gb|AAO34969.1| bacterial peptide chain release factor 2 [Clostridium tetani E88] Length = 325 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 161/322 (50%), Positives = 228/322 (70%), Gaps = 2/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P W+++ A+ + ++ + + + + +++R+ D+L+L+EL EE+D S E Sbjct: 2 QEPDFWEDIKRAQEVTQQEKLIKDRLEKFDSLENRIEDSLVLIELMKEEEDISSAGEVLK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L +K E+E + E LLSGE D N+A + +HAG GGT++QDW MLLRMYTRWAEK+ + Sbjct: 62 ELVLLKKEIESFRIEVLLSGEYDRNNAIMTLHAGVGGTDAQDWTEMLLRMYTRWAEKKGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K + L+ G+EAGIKS TL I G AYG+LK E+GVHR+VRISPY++N +R TSF+S+ Sbjct: 122 KVDTLDFLPGDEAGIKSVTLKITGDFAYGYLKAEKGVHRIVRISPYNANGKRQTSFASLE 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P + + +IEI + D ++DTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQH Sbjct: 182 LIPELTEDQDIEIIDDDLKVDTYRASGAGGQHVNKTESAVRITHIPTGIVVQCQSERSQH 241 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML+AKL EL E + +E+I ++ K ++GWG QIRSYV PY +VKD RT+ Sbjct: 242 SNRDTALKMLKAKLVELKEAEHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + + V+DGD+D F+ L Sbjct: 301 AETGNLTAVMDGDIDLFINEYL 322 >gi|169335448|ref|ZP_02862641.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM 17244] gi|169258186|gb|EDS72152.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM 17244] Length = 364 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 170/341 (49%), Positives = 231/341 (67%), Gaps = 12/341 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D V++ + +N D W +A +++E + L + I+ ++ + D +L+E+ Sbjct: 32 DELVKKETLMN----DESFWNENDKANKILKEVKSLKSQINSYSSLEYKKDDISVLVEM- 86 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ED Q +D+ LE+E + ++LLSGE DSN+A L +H GAGGTESQD Sbjct: 87 LQED---FSQNEADSAMEELLELEKELKVFTIDTLLSGEYDSNNAILSIHPGAGGTESQD 143 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRM+ R+AEKRKFK + LE G+ AGIKS TLLI G NAYG+LKGE+GVHRLVR Sbjct: 144 WAEMLLRMFIRFAEKRKFKIKILEQLPGDIAGIKSVTLLISGDNAYGYLKGEKGVHRLVR 203 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+DSNSRRHTSF+S+ V P + + I +EI+ SD +IDTYRA GAGGQHVN TDSAVRI Sbjct: 204 ISPFDSNSRRHTSFASVDVEPEIKEDINLEINPSDLKIDTYRAGGAGGQHVNKTDSAVRI 263 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PT +VV CQ ERSQ +NK A +L+ KLY++ +++ +E + + +I WG QI Sbjct: 264 THLPTKIVVSCQNERSQFQNKETAMKILKGKLYKILMEEHKEKIDEIKGDYGQIAWGNQI 323 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSYV PY MVKD RT E ++ V+DGD++ F+ A L + Sbjct: 324 RSYVFHPYSMVKDHRTKTETSNVQSVMDGDINIFIDAFLKM 364 >gi|282158488|gb|ADA77879.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis NE061598] Length = 248 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 148/245 (60%), Positives = 190/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ FK ++ DG+ AGIK Sbjct: 1 MFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ + Sbjct: 61 GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPT 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+ A L++KLYE Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +ELQKR N E SK +IGWG QIRSYVL + +KDLRT +E T+ VLDGDLD F Sbjct: 181 MELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGVENTNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 369 Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 170/358 (47%), Positives = 239/358 (66%), Gaps = 9/358 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFI- 59 +L + L +G D DN + + +T + W + +A+ +M + D+ +FI Sbjct: 13 ELDKNLKMIGAHLDPDNLFVEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFIN 72 Query: 60 --KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 +E++D+ D + ++E EE D L + ++L +K E+ + ++ L GE D N+A Sbjct: 73 LKEELKDQ-SDLIDIIEETNEELDS--LVDVENSLNMLKKEISSFKIKTELDGEYDRNNA 129 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 Y+ +HAGAGG E+ DWA ML+RMYTR+ E+R FK + ++++ E GIKSAT+ IKG A Sbjct: 130 YMVIHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFA 189 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI D RIDTYRASG Sbjct: 190 YGYLKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASG 249 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIA 296 AGGQHVN TDSAVRITHIPTGV+ Q ERSQ +NK A +L AKL ++ E + RE+I Sbjct: 250 AGGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIE 309 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +I + + T+I WG QIRSYV PY +VKD RTN E + V+DGD+D F+ A LA K Sbjct: 310 DI-QGNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 366 >gi|300869767|ref|YP_003784638.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000] gi|300687466|gb|ADK30137.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000] Length = 312 Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 161/309 (52%), Positives = 216/309 (69%), Gaps = 6/309 (1%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI---LQETSDNLQRIKLEVEYK 102 M+ER L + I I+ + + L+E+A+E +D + L+ LQ++ E+E K Sbjct: 1 MKERMLLLDKIEPIENLIKNANNIYELVEMAIESNDTEMEKELETECIELQKVFNELETK 60 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +L SGE DS +AYL ++AGAGGTES DWA+ML RMY R+ E+ F E + G+E Sbjct: 61 ---NLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDE 117 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIK + ++G AYG+L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+E Sbjct: 118 AGIKQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVE 177 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+++D RIDTYRASGAGGQHVN T SA+RITHIPT +VVQCQ ERSQH NK A ML+A Sbjct: 178 INQADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKA 237 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 KLY+LE +K ++ KT+I WG QIRSYV QPYQMVKDLRT E + + V+DG+ Sbjct: 238 KLYQLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGN 297 Query: 343 LDDFMKATL 351 +D+F+ A L Sbjct: 298 IDEFISAYL 306 >gi|331270416|ref|YP_004396908.1| peptide chain release factor 2 [Clostridium botulinum BKT015925] gi|329126966|gb|AEB76911.1| peptide chain release factor 2 [Clostridium botulinum BKT015925] Length = 327 Score = 318 bits (814), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 165/318 (51%), Positives = 231/318 (72%), Gaps = 2/318 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++ + W ++ +A+ + +E + L + I ++RL D IL+E+++EEDD S ++E + Sbjct: 2 QESNFWDDINKAQEVTQEAKGLKDRIDKYSNTKNRLEDLKILIEMSIEEDDESSVEEILN 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 ++ I++ ++ + + LLSGE D N+A + +HAGAGGT++QDW MLLRMYTRW+E + + Sbjct: 62 EVKEIQIIIDEFRVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWSETKGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E L+I G+EAGIKSA+L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 122 KVETLDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASLE 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P + +S +IEI D RIDTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ Sbjct: 182 ILPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQF 241 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A +ML++KL EL E +E+I ++ K EIGWG QIRSYV QPY MVKD RTN Sbjct: 242 QNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLK-EIGWGSQIRSYVFQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFM 347 E + V+DGD+D F+ Sbjct: 301 TEMGNVEAVMDGDIDIFI 318 >gi|309390159|gb|ADO78039.1| bacterial peptide chain release factor 2 (bRF-2) [Halanaerobium praevalens DSM 2228] Length = 365 Score = 318 bits (814), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 164/321 (51%), Positives = 224/321 (69%), Gaps = 3/321 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ + I I+ ++++ + I LELA EED ++ +E + L Sbjct: 44 FWDDKENARQKSQQLDRIKKRIKVIQSLEEKFEEAEIYLELAAEED-ANLNKELQNTLAE 102 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ E+E + + L+ D ++A L +H GAGGTESQDWA MLLRMY+RWAE ++ E Sbjct: 103 LEKEIEKLELKLRLNEPYDDHNAILSIHPGAGGTESQDWAQMLLRMYSRWAEANDYQLET 162 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+ + GEEAGIKS TL+I G AYG+LKGE+GVHRLVRISP+D++ RRHTSF+S+ V P Sbjct: 163 LDFNPGEEAGIKSVTLMISGDYAYGYLKGERGVHRLVRISPFDASGRRHTSFASVDVMPE 222 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +E+EI E++ +IDTYRASGAGGQHVN TDSAVRITH PTGVVVQCQ +RSQHKNK Sbjct: 223 IDSDLEVEIDENNLKIDTYRASGAGGQHVNKTDSAVRITHQPTGVVVQCQNQRSQHKNKE 282 Query: 275 QAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A +L +KL EL+ + + E+I +G K EI WG QIRSYV PY M+KD RT+ E+ Sbjct: 283 TAMKILSSKLLELKREAQAEKIDELGGEHK-EIAWGSQIRSYVFHPYSMIKDHRTDFEEG 341 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG LD+F+++ L K Sbjct: 342 NVDKVMDGYLDEFIESYLKYK 362 >gi|251780395|ref|ZP_04823315.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084710|gb|EES50600.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 325 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 158/322 (49%), Positives = 222/322 (68%), Gaps = 3/322 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ + +E + + + I ++ +Q +L D +L E+ +++DD E +N++ Sbjct: 6 FWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVLKEM-MDDDDEESAYEIINNIKE 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 I+ E++ E LLSGE D N+A L +H G GGT++ DW MLLRMYTRW EK+ +K E Sbjct: 65 IEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKNYKVEV 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +++ +G+EAGIKS TL + G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P Sbjct: 125 IDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASMEVLPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +I+I D ++DTYRASGAGGQH+N TDSAVRITHIPTGVVVQCQ ERSQ NK Sbjct: 185 LTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHIPTGVVVQCQNERSQFSNKD 244 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKL EL E +E+I ++ K ++GWG QIRSYV PY +VKD RTN+E + Sbjct: 245 TAMGMLKAKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTNVEVS 303 Query: 334 SPSDVLDGDLDDFMKATLAIKK 355 + + V+DGDLD F+ + L K Sbjct: 304 NVTAVMDGDLDLFINSYLKSSK 325 >gi|206890892|ref|YP_002247867.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742830|gb|ACI21887.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 287 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 149/276 (53%), Positives = 206/276 (74%), Gaps = 4/276 (1%) Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EED +L++ + ++ IK ++E+ + + LL GE D N+A + +H GAGGTESQDWA +L Sbjct: 7 EEDGYLLLKDLEEEVENIKSQIEHLEIKLLLKGEHDKNNAIVSIHPGAGGTESQDWAEIL 66 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +RMY RWAEK+ FK E +++ GEEAGIK T ++G AYG+LK E GVHRLVR+SP+D Sbjct: 67 MRMYLRWAEKKGFKVEIVDLQLGEEAGIKDVTFTVEGQYAYGYLKCESGVHRLVRVSPFD 126 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N RRHTSF+++ V P ++D+I++EI + D R+DT+RASGAGGQHVN SAVRI HIPT Sbjct: 127 ANKRRHTSFAAVSVLPEIEDNIQVEIKDEDIRVDTFRASGAGGQHVNKVSSAVRIVHIPT 186 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE--IANIGESSKTEIGWGRQIRSY 315 G++V CQ ERSQH+N+ A +LR+K+Y L LQK +E I +I +K EI WG QIRSY Sbjct: 187 GIIVTCQTERSQHRNREIAMKILRSKIYAL-LQKEQEDKIKSI-TGNKKEIAWGSQIRSY 244 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +L PY+++KD RT+IE + DVLDG++D F++ L Sbjct: 245 ILHPYRLIKDHRTDIEVYNVEDVLDGNIDIFIETYL 280 >gi|319891756|ref|YP_004148631.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius HKU10-03] gi|317161452|gb|ADV04995.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius HKU10-03] gi|323465075|gb|ADX77228.1| peptide chain release factor 2 [Staphylococcus pseudintermedius ED99] Length = 329 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 166/326 (50%), Positives = 224/326 (68%), Gaps = 11/326 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W N A+ ++ + + + ++ E+ + L + + EL EE D E D+ Sbjct: 4 DPQFWDNQERAQTIIDQNNAIKSVVNNYYEVAETLEEMIATYELLQEEYD----DEMKDD 59 Query: 92 LQR--IKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 L++ I + + QFE LL GE D+N+A LE+H GAGGTESQDW NMLLRMY R+ E+ Sbjct: 60 LEQEVIGFQTKVDQFELQLLLDGEHDANNAILELHPGAGGTESQDWTNMLLRMYQRYCEQ 119 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + FK E ++ G+EAG+KS T+L+KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+ Sbjct: 120 QGFKVEIVDYQAGDEAGVKSVTMLVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFA 179 Query: 208 SIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 S V P ++ IE+EI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q E Sbjct: 180 SCDVIPEFNNEKIEVEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNE 239 Query: 267 RSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 RSQ KN+ A ML+AKLY+LEL QK +E+A I + +IGWG QIRSYV PY MVKD Sbjct: 240 RSQIKNREAAMKMLKAKLYQLELEQKEQELAAI-RGEQKDIGWGSQIRSYVFHPYSMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RTN E + + V+DG++ F++A L Sbjct: 299 HRTNEETGNVNAVMDGEIGPFIEAYL 324 >gi|260584689|ref|ZP_05852435.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633] gi|260157712|gb|EEW92782.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633] Length = 331 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 160/321 (49%), Positives = 218/321 (67%), Gaps = 2/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + +A+M++++ L +++ ++ + +L E+ E+ + I E + Sbjct: 3 EPGFWDDNEKAQMVIQKSNELKAVYDTFHQLELQVEEVELLFEMYKEDPEEEIHDELVER 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++ E+E + LLSG D A LE+H GAGGTESQDW +MLLRMYTRWAE+ ++ Sbjct: 63 VHSVEKELEKYELSMLLSGPHDKCSAILEIHPGAGGTESQDWGSMLLRMYTRWAEQHGYR 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+D+ +RHTSF SI + Sbjct: 123 IETVDYQDGEEAGIKSVTLSIEGLNAYGYLKSEKGVHRLVRISPFDAAGKRHTSFCSIDI 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P ++ I+IEI+ D +ID YRASGAGGQH+N T SAVRITHIPTG+V Q Q +RSQ K Sbjct: 183 MPQLEGDIDIEINPDDLKIDVYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQRSQFK 242 Query: 272 NKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK QA ML+ KLY+LE +K+ E+A I + +I WG QIR+YV PY +VKDLR+ Sbjct: 243 NKDQAMAMLKTKLYQLEEEKKAAELAEI-RGEQKDIAWGSQIRNYVFHPYSLVKDLRSGH 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DGDLD FM A L Sbjct: 302 ETGNIGAVMDGDLDPFMDAYL 322 >gi|110802702|ref|YP_699445.1| peptide chain release factor 2 [Clostridium perfringens SM101] gi|123145940|sp|Q0SR12|RF2_CLOPS RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 364 Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 160/351 (45%), Positives = 234/351 (66%), Gaps = 3/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +G D + ++ + L K ++ W +V +A+ + +E + + + I K Sbjct: 14 ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +R+ D +L EL +EE+D +E ++ + E++ + E++LSGE D N+A L + Sbjct: 74 LNERIDDVEVLKEL-MEENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNNAILTL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G GG+++ DW MLLRMYTRW EK+ + E ++ G+EAG+KS TL +KG AYG+L Sbjct: 133 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +IEI+ D RIDTYRA GAGGQ Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGE 300 HVN T+SAVRITHIPTG+VVQCQ ERSQ N+ A ML++KL EL E +E+I ++ Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K ++GWG QIRSYV PY MVKD RTN+E ++ + V+ GD+D+F+ A L Sbjct: 313 ELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362 >gi|162447197|ref|YP_001620329.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A] gi|189039998|sp|A9NF23|RF2_ACHLI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|161985304|gb|ABX80953.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A] Length = 365 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 172/346 (49%), Positives = 224/346 (64%), Gaps = 4/346 (1%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L D D RL + +P+ W + +AK + +E L I IQ++ D Sbjct: 20 LENALDLDAINNRLKEIEPIMANPNFWNDSNQAKKISQELNQLTEKKQTITSIQNQYEDA 79 Query: 70 LILLELALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L+ LE A E + IL+ D+LQ+ E E E LL+GE D N+A LE+H GAGGT Sbjct: 80 LMWLEEAKEGTESWDILEAEIDSLQKKISEFE---IEVLLNGEYDHNNAILELHPGAGGT 136 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ES DW +L+RMY R+A + +K E L GEEAG+KS TL I GP AYG LK E+GVH Sbjct: 137 ESMDWCGILMRMYERFAGYKGYKVEILNYLAGEEAGVKSVTLRISGPYAYGNLKSERGVH 196 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DSN RRHTSF S V P +D++ E+E+ + D R+DT+++SGAGGQ VNTT S Sbjct: 197 RLVRISPFDSNKRRHTSFVSCDVAPEIDETSEVELKDDDIRMDTFQSSGAGGQSVNTTYS 256 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+THIPTG+VV Q ERSQ KNK A +L++KL + EL++++ N + K++IGW Sbjct: 257 AVRLTHIPTGIVVNIQNERSQIKNKEAAMQILKSKLIQKELEEKQAKLNALKGEKSDIGW 316 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYV QPYQMVKD RTN E + V+DGD+D F+ A L K Sbjct: 317 GSQIRSYVFQPYQMVKDHRTNYEVGNIQSVMDGDIDGFINAYLKSK 362 >gi|167011047|ref|ZP_02275978.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica FSC200] Length = 248 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 148/245 (60%), Positives = 189/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+N A+L++ +G+GGTE+QDWA ML+RMY RWA+ FK ++ DG+ AGIK Sbjct: 1 MFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ + Sbjct: 61 GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+ A L++KLYE Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +ELQKR N E SK +IGWG QIRSYVL + +KDLRT +E T+ VLDGDLD F Sbjct: 181 MELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGVENTNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|224373403|ref|YP_002607775.1| peptide chain release factor 2 [Nautilia profundicola AmH] gi|254790918|sp|B9L5Y7|RF2_NAUPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|223589806|gb|ACM93542.1| peptide chain release factor 2 [Nautilia profundicola AmH] Length = 367 Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 168/334 (50%), Positives = 223/334 (66%), Gaps = 2/334 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL + P W + + + +E+ + + K+ + L DN + ELA E+D Sbjct: 32 RLKEIEELENSPDFWNDPKTSAKVQKEKNAILRKLEKYKKAKTALQDNKDMFELASMEED 91 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 L E +++Q +K + + E +LS E D+ +A + +H GAGGTES DWA++L RMY Sbjct: 92 EETLNEVFNDVQDLKKIIRDLEIEVMLSDENDAKNAIISIHPGAGGTESHDWASILYRMY 151 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+AE+R +K E L+ G+EAGIK + L+KG NAYG+LK E G+HRLVR+SP+DS R Sbjct: 152 LRYAERRGWKVEVLDYQAGDEAGIKDVSFLVKGENAYGYLKAENGIHRLVRVSPFDSGGR 211 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF+S+ V P +DD IEIEI D RID +RASGAGGQHVN T+SAVRITHIPTG+VV Sbjct: 212 RHTSFASVQVSPEIDDDIEIEIDPKDIRIDVFRASGAGGQHVNKTESAVRITHIPTGIVV 271 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ +RSQHKNK A ML++KLYELEL+KR+ A K E+GWG QIRSYVL PYQ Sbjct: 272 GCQTDRSQHKNKDMAMKMLKSKLYELELEKRK--AEEEGKPKDEMGWGHQIRSYVLFPYQ 329 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 VKD R+N + D+LDGDLD+ ++ L +K Sbjct: 330 QVKDNRSNKAYSRVDDILDGDLDEVIEDVLIAEK 363 >gi|241895046|ref|ZP_04782342.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC 33313] gi|241871764|gb|EER75515.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC 33313] Length = 396 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 159/349 (45%), Positives = 222/349 (63%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S ++ G D D ++ K +P WQ+ + A+ ++ E L ++ Sbjct: 38 MSAEIEKFGDSLDLDALNDEIAANEAKMVEPDFWQDNVAAQKIIDENNVLKGRRDDYLKL 97 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + ++L E D + E +D+L ++ ++ + LL+ D N+A LE+H Sbjct: 98 ANGVENVEAAIDLLSELYDEDMATEMADDLDKLSEDLSAYRLAQLLNEPYDKNNAILEIH 157 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G+GGTES DW L RMYTRWAE+ FK + ++ H G+ AG+ S TL+I G NAYG+L+ Sbjct: 158 PGSGGTESADWGANLQRMYTRWAEQHGFKVDIMDYHPGDVAGVDSVTLMITGHNAYGYLR 217 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHR VRISP+DS RRHTSF SI V P +DDS+E++I+ +D ++D YRASGAGGQH Sbjct: 218 SERGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDSVEVDINPADVKMDVYRASGAGGQH 277 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+THIPTG+VV QQ+RSQ +NK A+ MLRAKLY+LE+ K+E+ Sbjct: 278 INKTSSAVRLTHIPTGIVVASQQQRSQFQNKDTAYAMLRAKLYQLEMDKKEKERAAIAGD 337 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E GWG QIRSYV QPY+MVKD R E +P V+DGDLD F+ A L Sbjct: 338 HLENGWGSQIRSYVFQPYRMVKDHRDGFESGNPQAVMDGDLDPFINAYL 386 >gi|322379487|ref|ZP_08053853.1| Peptide chain release factor RF-2 [Helicobacter suis HS1] gi|322380468|ref|ZP_08054667.1| peptide chain release factor 2 [Helicobacter suis HS5] gi|321147113|gb|EFX41814.1| peptide chain release factor 2 [Helicobacter suis HS5] gi|321148094|gb|EFX42628.1| Peptide chain release factor RF-2 [Helicobacter suis HS1] Length = 382 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 148/274 (54%), Positives = 196/274 (71%), Gaps = 2/274 (0%) Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D L + + ++ V+ + +L+ + DS DA + + G GGTESQDWA+ML Sbjct: 99 QEDTQALTQLFEEAPKLAARVQSMEVSVMLANDQDSMDAIVSIQPGVGGTESQDWASMLY 158 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RWAE++ FK E L+ +GEEAGIK +I+G N YG++K E G+HRLVR+SP+++ Sbjct: 159 RMYLRWAERKGFKVELLDYQEGEEAGIKGVAFVIRGVNVYGYMKNENGIHRLVRMSPFNA 218 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +RHTSF+S+ V P VDD I I I E D R+DTYRASGAGGQHVN T+SA+RITH TG Sbjct: 219 NGKRHTSFASVQVSPEVDDDINIVIEEKDIRVDTYRASGAGGQHVNKTESAIRITHFATG 278 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VVQCQ +RSQHKNKA A ML++KLYELEL K+ E +N+ E K++IGWG QIRSYVL Sbjct: 279 IVVQCQNDRSQHKNKAMALKMLKSKLYELELCKQREQSNMEE--KSDIGWGHQIRSYVLA 336 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 PYQ +KD R+ I ++ +LDGDLD M+ L Sbjct: 337 PYQQIKDARSEIAYSNVGAILDGDLDTLMEDVLV 370 >gi|319935038|ref|ZP_08009481.1| peptide chain release factor 2 [Coprobacillus sp. 29_1] gi|319810056|gb|EFW06425.1| peptide chain release factor 2 [Coprobacillus sp. 29_1] Length = 371 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 170/354 (48%), Positives = 228/354 (64%), Gaps = 18/354 (5%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 LN L D + + + L +T D H W N +AK + N ++ +K+ D Sbjct: 17 LNELFVSIDIEGLKREIEGLTVQTLDEHFWNNQEQAKKIY-------NQLNEMKKTTDTY 69 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES---------LLSGEADSNDA 117 D ++ L ++ ++ET D + L+ +Y+ FE L SGE D ++A Sbjct: 70 DD--LVSSLNDLDETYDYVKETEDTDFKEALDQDYELFEKHLNDFEKTLLFSGEYDHHNA 127 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 +E+H GAGGTESQDWA ML+RMY R+ +K+ FK E L+ DGEEAG+KS TL G NA Sbjct: 128 IVEIHPGAGGTESQDWAAMLMRMYQRYGDKKDFKVEVLDYLDGEEAGLKSVTLRFIGYNA 187 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG LK E+GVHRLVRISP+DS+ RRHTSF+S+ V P D+ IEIEI ++D RIDTYRASG Sbjct: 188 YGHLKAEKGVHRLVRISPFDSSKRRHTSFASVDVMPEFDNDIEIEIDQNDLRIDTYRASG 247 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQH+N TDSA+RITHIPT +VV CQ +RSQ +N+ QA ML++KLY++ L+++ + Sbjct: 248 AGGQHINKTDSAIRITHIPTHIVVTCQSQRSQIQNREQALIMLKSKLYQVMLEEQASKLS 307 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + I WG QIRSYVL PY MVKD R+ E +P +LDGDLDD + A L Sbjct: 308 DIKGEQKAIEWGSQIRSYVLHPYSMVKDNRSGYESNNPKAILDGDLDDCIYAYL 361 >gi|258405989|ref|YP_003198731.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692] gi|257798216|gb|ACV69153.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692] Length = 371 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 161/351 (45%), Positives = 223/351 (63%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L + L D RL + + P WQN E ++RE+ L I + Sbjct: 12 LELQEKFESLWRRLDLQGHHDRLKTIEEELAKPEAWQNPEELTPILREKSRLTEEIESWE 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++D D LE+A E+ +LQ S+ + ++ + E LLS D +A LE Sbjct: 72 ALRDLHEDLQEWLEMADEDQGQEVLQALSETNANLAAQLNKVEMELLLSKPEDKGNAILE 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTE+QDWA MLLRMY RW E+R FK + L+ GEEAGIKS TL I+G AYG Sbjct: 132 IHPGAGGTEAQDWAEMLLRMYLRWCERRGFKVQELDSLPGEEAGIKSVTLQIQGTFAYGL 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E+G+HRL+RISP+D++ RRHTSF+S+ VYP D IEI++++ D R+D +R+SG GG Sbjct: 192 LQAEKGIHRLIRISPFDTSGRRHTSFASVDVYPEAADDIEIDVNDEDIRVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN T SA+RITH P+G+VVQCQ E+SQ +NK A +L+++LY+ E +KRE Sbjct: 252 QNVNKTSSAIRITHFPSGIVVQCQNEKSQRRNKETAMKILKSRLYDQERKKREADKQAEY 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +SK I WG QIR+Y LQPY++VKD RTN E VLDGD+D F+++ L Sbjct: 312 ASKEAIAWGSQIRTYTLQPYRLVKDHRTNTEAGDVDKVLDGDIDVFLRSYL 362 >gi|310778152|ref|YP_003966485.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter polytropus DSM 2926] gi|309747475|gb|ADO82137.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter polytropus DSM 2926] Length = 365 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 160/340 (47%), Positives = 226/340 (66%), Gaps = 1/340 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 G D + ++ L +T W + E++ L++E L I + I+ +L D + Sbjct: 22 GSLDLEGKENKVKELEKETLKDGFWNDKRESEKLIKEMNALKEIIGEYRSIE-KLSDEVS 80 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +L +E + L+E + + + + LL GE D+N+A + +H+GAGGTE+ Sbjct: 81 VLLEFVEMGEDEFLEELETKHRGLDKVIGAFDVKLLLDGEFDANNAIVTIHSGAGGTEAC 140 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY+RW R +K L+ GE GIKS T+L++G AYG+LK E+G+HRLV Sbjct: 141 DWADMLYRMYSRWCNNRGYKITELDFMPGEMVGIKSITILVEGMRAYGYLKNEKGIHRLV 200 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+D+N +RHTSF+S+ V P VD++ +IEI+ D +IDTYRASGAGGQHVNTTDSAVR Sbjct: 201 RISPFDANKKRHTSFASVDVMPEVDETTDIEINTGDLKIDTYRASGAGGQHVNTTDSAVR 260 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+GVVV CQ+ERSQ +N+ A +LR+KL ELE++KREE + +++IGWG Q Sbjct: 261 ITHLPSGVVVTCQRERSQLQNRETAMKLLRSKLLELEMKKREEELKKIQGEQSDIGWGSQ 320 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYV QPY +VKD RT +E + V+DGD+DDF+ L Sbjct: 321 IRSYVFQPYTLVKDHRTLVESGNIKAVMDGDIDDFINGHL 360 >gi|269836751|ref|YP_003318979.1| hypothetical protein Sthe_0720 [Sphaerobacter thermophilus DSM 20745] gi|269786014|gb|ACZ38157.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM 20745] Length = 369 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 159/346 (45%), Positives = 223/346 (64%), Gaps = 2/346 (0%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +L+ +G D + + L ++ DP W + A+ +MR L N + E+ + Sbjct: 16 RLDRIGVRLDLPAKQREIEELEARSADPEFWNDGAGAQRVMRRLGALRNQVETWTELHQQ 75 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 D L++LA +DD + E + +R+ VE + LLSG+ D +DA + +HAG Sbjct: 76 AADLRELIDLAEADDD--LRDEIAAETERVLRGVEQLELNLLLSGQYDEHDAIMAIHAGT 133 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG ++QDWA ML+RMY RWA R F+ + L++ +GEEAGIKSAT+ I+GP AYG+ KGE Sbjct: 134 GGVDAQDWAEMLMRMYLRWASNRGFQAQVLDVTEGEEAGIKSATIEIRGPYAYGYTKGEA 193 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HRLVR+SP+D RRHT+F+ + V P V++ EI I + + RIDTYR+SGAGGQHVN Sbjct: 194 GTHRLVRLSPFDQAHRRHTAFALVEVLPQVEEDTEIVIRDDEIRIDTYRSSGAGGQHVNK 253 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV CQ ERSQ +N+ A +LRA+L EL ++KREE + Sbjct: 254 TDSAVRITHLPTGIVVTCQNERSQIQNRETAMKILRARLTELAIRKREEEQAKLKGEHVA 313 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +GWG +IRSYVLQPY MV D RT ++ V +G++D F++A L Sbjct: 314 VGWGNRIRSYVLQPYTMVTDHRTEYSTSNVQAVFEGEIDPFIEAYL 359 >gi|163816074|ref|ZP_02207444.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759] gi|158448884|gb|EDP25879.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759] Length = 370 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 172/340 (50%), Positives = 232/340 (68%), Gaps = 4/340 (1%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D +N R++ LN + E P W +V ++ + RE ++L + + K++++ D L+ Sbjct: 25 LDIENKTDRIAKLNYEMEQPSFWDDVDRSREVSRELKNLQDLVDNYKKLENDYLDIDTLI 84 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +A EE+D S++ E + + K E E + L + E D +A L +H+G GGTES DW Sbjct: 85 LMAEEENDSSLIPEIGEQIDIFKKEFEEYRINLLFTDEFDDCNAVLTLHSGEGGTESCDW 144 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+ML RMYTRWAEK E L+ +G+EAGIKS T+ I GP+AYG+LK E+GVHRLVRI Sbjct: 145 ASMLYRMYTRWAEKHGMSVEVLDFLEGDEAGIKSVTIQINGPHAYGYLKSEKGVHRLVRI 204 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP++S +R TSF+S V P ++ +EIEI + D RIDTYR+SGAGGQH+N T SA+RIT Sbjct: 205 SPFNSAGKRMTSFASCDVIPDIEQDLEIEIRDEDIRIDTYRSSGAGGQHINKTSSAIRIT 264 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQ 311 H PTG+VVQCQ ERSQ NK +A ML++KLY L+ Q+ E I++I GE T+ G+G Q Sbjct: 265 HFPTGIVVQCQNERSQLMNKNKAMQMLKSKLYLLKKQENLERISDIRGEV--TDNGFGSQ 322 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVLQPY MVKD RT+ E ++ S VLDGDLD FM A L Sbjct: 323 IRSYVLQPYTMVKDKRTSYENSNVSAVLDGDLDGFMTAYL 362 >gi|169630559|ref|YP_001704208.1| peptide chain release factor 2 [Mycobacterium abscessus ATCC 19977] gi|238688912|sp|B1MEU8|RF2_MYCA9 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|169242526|emb|CAM63554.1| Peptide chain release factor 2 (PrfB) [Mycobacterium abscessus] Length = 367 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 162/351 (46%), Positives = 226/351 (64%), Gaps = 5/351 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L DP+LW + + + + H + ++E+ Sbjct: 12 LDTTLTTVERVLDVDGLRARIKTLEEAAADPNLWDDQARGQQVTSQLSHAQGELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA E +D S++ E +++ ++E + +LLSGE D +A + + Sbjct: 72 RSRLDDLPVLYELAEESEDNSVVAEADAERVKLREDIEAMEVRTLLSGEYDEREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAE K+ E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEAHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDLRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+A+L LE +++EE A + ++ Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQARL--LERKRQEERAEM-DAL 308 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K + G WG Q+RSYVLQPYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 309 KGDGGSSWGTQMRSYVLQPYQMVKDLRTEYEVGNPAAVLDGDIDGFIEAGI 359 >gi|153810056|ref|ZP_01962724.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174] gi|149834234|gb|EDM89314.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174] Length = 335 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 153/321 (47%), Positives = 216/321 (67%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P W N ++ M+E + + + + ++ ++ D ++E+ EE+D I+ E + Sbjct: 2 EAPDFWDNAEVSQQKMKELKSMKDDMEIYHSLETQMEDMETMIEMGYEENDPEIIPEIQE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + + + ++LLSGE DS +A ++++AGAGGTE+ DW ML RMY+RW +++ F Sbjct: 62 MLDEFQKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+ DG+EAG+KS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 TMEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH Sbjct: 182 VMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK +A ML+AKLY L+ Q+ E + T+IGWG QIRSYV+QPY MVKD RT+ Sbjct: 242 MNKDKAMQMLKAKLYLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTSE 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDGD+D F+ A L Sbjct: 302 ETGNVDAVLDGDIDPFINAYL 322 >gi|312877708|ref|ZP_07737662.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus 6A] gi|311795509|gb|EFR11884.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus 6A] Length = 316 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 164/307 (53%), Positives = 219/307 (71%), Gaps = 2/307 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ + L + I +++ + D +L EL+L+E + + +E L ++ ++E + E Sbjct: 1 MQKIKRLKDKIERFQKLYSQWEDLKVLTELSLDEGNHEMAEELEKELLDLERKIEDFKIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL+G D N+A L +HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGI Sbjct: 61 VLLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I G NAYG+LK E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E Sbjct: 121 KNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D IDT+RASGAGGQHVN T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL Sbjct: 181 EDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLL 240 Query: 286 EL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 EL E ++RE+I + + +TEIGWG QIRSYV PY +VKD RT E + V+DG++D Sbjct: 241 ELKEKERREKIQKL-KGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEID 299 Query: 345 DFMKATL 351 F+ A L Sbjct: 300 VFINAYL 306 >gi|223038905|ref|ZP_03609197.1| peptide chain release factor 2 [Campylobacter rectus RM3267] gi|222879878|gb|EEF14967.1| peptide chain release factor 2 [Campylobacter rectus RM3267] Length = 366 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 172/357 (48%), Positives = 233/357 (65%), Gaps = 10/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ + G+ ++ RL + D + WQ++ +A + +E+ + N ++ Sbjct: 13 LNTKIENIAGVVKPESIKTRLKEIEELENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAY 118 + + D L ELA E+D +ET ++L E+E K + LLSGE D +A Sbjct: 73 KSAVDDAKDLYELANSEND----EETINSLFAEAGELEDKIVNLEISMLLSGEDDGKNAI 128 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + +H GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + ++KG NAY Sbjct: 129 VTIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAY 188 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+LK E G+HRLVR SP+DS RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GA Sbjct: 189 GYLKAENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGA 248 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML+++LYELEL K++E A Sbjct: 249 GGQHVNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAA-- 306 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 307 GSIEKSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363 >gi|258645336|ref|ZP_05732805.1| peptide chain release factor 2 [Dialister invisus DSM 15470] gi|260402685|gb|EEW96232.1| peptide chain release factor 2 [Dialister invisus DSM 15470] Length = 330 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 159/324 (49%), Positives = 215/324 (66%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W+N AK + ++ A + R LL++A+EE+D + E + Sbjct: 3 DPSFWENGDHAKEISQKATEAKAAYDTYTRLFARAESIKELLDMAIEENDQDMEGELEEE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + +K ++ K+ E LL+ E D+NDA + HAGAGGTE+QDW ML+RMY +WAE F Sbjct: 63 INELKDILDKKEIELLLNDEYDANDAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEGFV 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L + G+EAG+KSA +++G AYG LK E+GVHRLVRISP+D+ RRHTSFS++ V Sbjct: 123 LEELNMLPGDEAGVKSAEYMVRGKFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + D IEI+++ +D R+D YRASGAGGQH+N T SAVR+THIPTG+V CQ ERSQ + Sbjct: 183 MPEIGDDIEIDLNMADVRVDYYRASGAGGQHINKTSSAVRMTHIPTGIVAACQNERSQFQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK Q +L+AKL+ELE+QKRE++ E + I WG QIRSYV QPY +VKD RT IE Sbjct: 243 NKEQCLRLLKAKLFELEMQKREQVKKGIEGEQQAIEWGSQIRSYVFQPYTLVKDNRTGIE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 + V+DG L+ F++ L KK Sbjct: 303 TGNIQSVMDGGLNPFIEGFLKHKK 326 >gi|167855181|ref|ZP_02477952.1| peptide chain release factor 2 [Haemophilus parasuis 29755] gi|219871045|ref|YP_002475420.1| peptide chain release factor 2 [Haemophilus parasuis SH0165] gi|167853726|gb|EDS24969.1| peptide chain release factor 2 [Haemophilus parasuis 29755] gi|219691249|gb|ACL32472.1| peptide chain release factor 2 [Haemophilus parasuis SH0165] Length = 248 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 146/245 (59%), Positives = 190/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD +IEI+ + Sbjct: 61 SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDFDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ RSQH+NK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E+ K+ E SK++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 MEMMKKNAEKQAMEESKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|197123211|ref|YP_002135162.1| LigA [Anaeromyxobacter sp. K] gi|196173060|gb|ACG74033.1| LigA [Anaeromyxobacter sp. K] Length = 372 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 159/330 (48%), Positives = 226/330 (68%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LSR+L L G D + R++ ++ +EDP W + ++A+ L++E+ L+ Sbjct: 11 ELSRRLEALRGSLDVERKELRVAEISKLSEDPAFWTDNVKAQALLKEKAQLEQVTQACAA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L ELA E D + E ++ + + ++E + + +LSG D+ A +EV Sbjct: 71 VRRALDDAQALSELAEEARDDATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG E+ DWA ML RMY R+ E+R ++ E ++ GEEAGI SA+ +++G + YGWL Sbjct: 131 KSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D N+RR TSF+++ V P ++D I I+I E+D RIDTYR+SGAGGQ Sbjct: 191 KAEKGVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VN TDSAVR+TH+PTG+VV Q ERSQ KN++ AW +LRAKLY+LE +KR + E+ Sbjct: 251 KVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAEA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +I +G QIRSYVLQPYQMVKDLRT +E Sbjct: 311 LKKDIDFGSQIRSYVLQPYQMVKDLRTGVE 340 >gi|182416046|ref|YP_001821112.1| peptide chain release factor 2 [Opitutus terrae PB90-1] gi|177843260|gb|ACB77512.1| peptide chain release factor 2 [Opitutus terrae PB90-1] Length = 341 Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 163/324 (50%), Positives = 219/324 (67%), Gaps = 7/324 (2%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQDRLCDNLI-LLELALEEDDCSILQE 87 P W + A+ + + L A+ +F K+++D D ++ L+E A E + S QE Sbjct: 4 PTFWDSNERAQKHIAKLNGLKKAVLPVVAFHKKVED--LDVMVELVEAASEGERESYAQE 61 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 N+ + E++ + S L+G+ D N+A L + +GAGGTES DWA+ML RMY RWAE+ Sbjct: 62 LDSNVTAMVEELDALEIASFLTGQFDRNNAILSIQSGAGGTESNDWADMLFRMYNRWAER 121 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R F E ++ G++AGI ATLLIKG NAYG+ K E+GVHRLVRISP+D+N RRHTSF Sbjct: 122 RGFSIEVQDVQAGDQAGITKATLLIKGENAYGYAKAERGVHRLVRISPFDANKRRHTSFC 181 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + + +++EI+E+D RID YR+SG GGQ VNTTDSAVRITH+ +G+VV CQ ER Sbjct: 182 AVDVVAEITEDVDVEINENDLRIDVYRSSGKGGQGVNTTDSAVRITHLSSGIVVVCQNER 241 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KNKA A N+L+A+LYE + ++ + K EIGWG QIRSYVLQPYQMVKDLR Sbjct: 242 SQLKNKAAAMNVLKARLYEKKQDEQRAEMDKFYGEKGEIGWGAQIRSYVLQPYQMVKDLR 301 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T + + VLDGDLD F+ A L Sbjct: 302 TGVSTSDTQGVLDGDLDRFVNAWL 325 >gi|255323494|ref|ZP_05364625.1| peptide chain release factor 2 [Campylobacter showae RM3277] gi|255299531|gb|EET78817.1| peptide chain release factor 2 [Campylobacter showae RM3277] Length = 366 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 172/357 (48%), Positives = 233/357 (65%), Gaps = 10/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ + G+ ++ RL + D + WQ++ +A + +E+ + N ++ Sbjct: 13 LNTKVENIAGVVKPESIKARLKEIEEMENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAY 118 + + D L ELA E+D +ET ++L E+E K + LLSGE D +A Sbjct: 73 KSAVDDAKELYELANSEND----EETINSLFAEADELEDKIVNLEISMLLSGEDDGKNAI 128 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + +H GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + ++KG NAY Sbjct: 129 VTIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAY 188 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+LK E G+HRLVR SP+DS RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GA Sbjct: 189 GYLKAENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGA 248 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML+++LYELEL K++E A Sbjct: 249 GGQHVNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAA-- 306 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 307 GSIEKSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363 >gi|160941606|ref|ZP_02088937.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC BAA-613] gi|158435500|gb|EDP13267.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC BAA-613] Length = 339 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 155/321 (48%), Positives = 219/321 (68%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W ++ ++RE ++L + + + ++ + D +++++ EE+D S++ E + Sbjct: 2 EEPGFWDEPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYEENDSSLIPEIEE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L++ K +E + + LLSGE DSN+A L ++AGAGGTES DW ++L RMY RWAE + F Sbjct: 62 MLEQFKETLENMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSILYRMYCRWAESKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K L+ DGEEAGIKS T+ I G NAYG+L+ E GVHRLVRISP++S +R TSF S Sbjct: 122 KAHVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ I+IE++ D R+DTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ Sbjct: 182 VMPNIEEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK +A ML+AKL ++ +++ A +IGWG QIRSYVLQPY MVKD RT Sbjct: 242 QNKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYTMVKDHRTGE 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDG +D+F+ A L Sbjct: 302 ESGNVDAVLDGAIDNFISAYL 322 >gi|42562784|ref|NP_176032.2| peptide chain release factor, putative [Arabidopsis thaliana] gi|332195261|gb|AEE33382.1| Peptide chain release factor 2 [Arabidopsis thaliana] Length = 482 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 158/340 (46%), Positives = 218/340 (64%), Gaps = 1/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W + RL L+ + LW + A + RE L + + + L +++ +L Sbjct: 133 LQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDML 192 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +LA EE+D + ET L ++ + K+ E+LLS + D Y+EV AGAGGTES DW Sbjct: 193 KLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDW 252 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M++ MY WA++RKF ++ GE AGIK AT+ + G AYG+ K E GVHRLVRI Sbjct: 253 AAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRI 312 Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D S +EI++SD RI+ +R+ GAGGQH NTTDSAVRI Sbjct: 313 SPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRI 372 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ + S TEI WG QI Sbjct: 373 VHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQI 432 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 433 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 472 >gi|15616167|ref|NP_244472.1| peptide chain release factor 2 in translation [Bacillus halodurans C-125] gi|10176229|dbj|BAB07324.1| peptide chain release factor 2 in translation [Bacillus halodurans C-125] Length = 288 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 166/282 (58%), Positives = 209/282 (74%), Gaps = 2/282 (0%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + EL EE D + QE L+ + E+ + + LL+ D N+A LE+H GAGGTES Sbjct: 3 VSYELCKEETDADLQQELEQGLKGLVKELNEFELQLLLNEPYDKNNAILELHPGAGGTES 62 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+MLLRMYTRWAE + +K E L+ G+EAG+KS TLLIKG NAYG+LK E+GVHRL Sbjct: 63 QDWASMLLRMYTRWAENKGYKVETLDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRL 122 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS+ RRHTSF S V P +DDS+EIEIS D +IDTYR+SGAGGQHVNTTDSAV Sbjct: 123 VRISPFDSSGRRHTSFVSCEVMPELDDSVEIEISTEDLKIDTYRSSGAGGQHVNTTDSAV 182 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309 RITH+PT VV CQ ERSQ KN+ +A ML+AKL +L+L++++ E+A I + EIGWG Sbjct: 183 RITHLPTNTVVTCQSERSQIKNRERAMKMLQAKLLQLKLEEQQKELAEI-RGEQKEIGWG 241 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV PY MVKD RTN+E + + V+DG++D F+ A L Sbjct: 242 SQIRSYVFHPYSMVKDHRTNVEVGNTNAVMDGEIDSFIDAYL 283 >gi|168215798|ref|ZP_02641423.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239] gi|182382266|gb|EDT79745.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239] Length = 323 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 157/318 (49%), Positives = 220/318 (69%), Gaps = 3/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D QE ++ Sbjct: 6 FWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAQEIISEVKA 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ + E Sbjct: 65 LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKGYSLET 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ N+ Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML++KL EL E +E+I ++ K ++GWG QIRSYV PY MVKD RTN E + Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNFETS 303 Query: 334 SPSDVLDGDLDDFMKATL 351 + + V+DGD+D+F+ A L Sbjct: 304 NVNGVMDGDIDNFIIAYL 321 >gi|168213727|ref|ZP_02639352.1| peptide chain release factor 2 [Clostridium perfringens CPE str. F4969] gi|170714817|gb|EDT26999.1| peptide chain release factor 2 [Clostridium perfringens CPE str. F4969] Length = 323 Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 156/318 (49%), Positives = 222/318 (69%), Gaps = 3/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D +E + ++ Sbjct: 6 FWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEIINEVKA 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ + E Sbjct: 65 LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKGYSLET 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ N+ Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML++KL EL E +E+I ++ K ++GWG QIRSYV PY MVKD RTN+E + Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETS 303 Query: 334 SPSDVLDGDLDDFMKATL 351 + + V+DGD+D+F+ A L Sbjct: 304 NVNGVMDGDIDNFIIAYL 321 >gi|12323033|gb|AAG51510.1|AC058785_13 peptide chain release factor 2, putative [Arabidopsis thaliana] Length = 426 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 158/340 (46%), Positives = 218/340 (64%), Gaps = 1/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W + RL L+ + LW + A + RE L + + + L +++ +L Sbjct: 77 LQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDML 136 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +LA EE+D + ET L ++ + K+ E+LLS + D Y+EV AGAGGTES DW Sbjct: 137 KLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDW 196 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M++ MY WA++RKF ++ GE AGIK AT+ + G AYG+ K E GVHRLVRI Sbjct: 197 AAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRI 256 Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D S +EI++SD RI+ +R+ GAGGQH NTTDSAVRI Sbjct: 257 SPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRI 316 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ + S TEI WG QI Sbjct: 317 VHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQI 376 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 377 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 416 >gi|291087933|ref|ZP_06347924.2| peptide chain release factor 2 [Clostridium sp. M62/1] gi|291073455|gb|EFE10819.1| peptide chain release factor 2 [Clostridium sp. M62/1] Length = 343 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 157/332 (47%), Positives = 226/332 (68%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 ++R+ L+ E+P W + + LMRE ++L + + ++++ D ++LE+ EE Sbjct: 1 MKRIDELDKSMEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEE 60 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 +D S++ E + ++E + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML R Sbjct: 61 NDPSLIPEIQGMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYR 120 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY RWA+K+ F T ++ DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S Sbjct: 121 MYQRWADKKGFTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSA 180 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 +R TSF S V P + + +++EI+ + RIDTYR+SGAGGQH+N T SA+RITH+PTG+ Sbjct: 181 GKRQTSFVSCDVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGI 240 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VVQCQ ERSQ +NK A ML+ KLY L+ ++ E + +I +G QIRSYV+QP Sbjct: 241 VVQCQNERSQFQNKEVAMQMLKTKLYMLKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQP 300 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y +VKD RT E + + VLDGD+D F+ A L Sbjct: 301 YTLVKDHRTGAESGNVNAVLDGDIDLFISAYL 332 >gi|300853467|ref|YP_003778451.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528] gi|300433582|gb|ADK13349.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528] Length = 329 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 157/324 (48%), Positives = 223/324 (68%), Gaps = 2/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K ++P+ W ++ A+ + E + L+ + +++ R+ D IL +A EE+D S ++ Sbjct: 2 KMQEPNFWDHLERAQEVTSEEKFLNEKLDMYNKLESRINDAEILAHIAEEEEDVSDCKDI 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ I+ ++ + E LLSGE D N+A L +H G GGT++QDW MLLRMYTRWAEK Sbjct: 62 LSEVEDIENIIDKLKIEILLSGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYTRWAEKS 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K E L+I ++AGIKS +L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S Sbjct: 122 GYKVETLDILPADDAGIKSVSLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFAS 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P + +I+I D R+DTYR+SGAGGQHVN T+SAVRITHIPTG+VVQCQ ERS Sbjct: 182 VEVLPELTKDQDIDIRPEDLRVDTYRSSGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 241 Query: 269 QHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 QH N+ A ML++KL EL E +E+I ++ K ++GWG QIRSYV PY +VKD R Sbjct: 242 QHYNRETAMLMLKSKLVELKERAHKEKIEDLAGELK-DMGWGSQIRSYVFHPYTLVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T +E + S V+DG++D+F+ A L Sbjct: 301 TGVENGNVSSVMDGEIDNFILAYL 324 >gi|116620705|ref|YP_822861.1| peptide chain release factor 2 [Candidatus Solibacter usitatus Ellin6076] gi|116223867|gb|ABJ82576.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Solibacter usitatus Ellin6076] Length = 322 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 167/316 (52%), Positives = 217/316 (68%), Gaps = 14/316 (4%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSI-----LQETSDNLQRIKLEV 99 M++R+ L+ A++ +I+ L D+L + ELA E + L+ S+ L+R++ + Sbjct: 1 MQDRKRLEEAVANDDQIR-ALTDDLDTMFELAREGEPVQADIERDLKPYSELLERLETAM 59 Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 LLSGE D+ A + +H GAGGTESQDWA MLLRMY RWAE+ KF T + + Sbjct: 60 -------LLSGENDARSAIVTIHPGAGGTESQDWAEMLLRMYLRWAEREKFATVITDRLE 112 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 GE AGIKS T + G NAYG L+ E GVHRLVRISP+D+N+RRHTSF+S++V+P VDD I Sbjct: 113 GEGAGIKSVTFEVNGENAYGLLQSEIGVHRLVRISPFDANARRHTSFASVFVFPQVDDEI 172 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +I+I + D RIDT+RASGAGGQHVN TDSAVRITH PTG+VVQCQ ERSQHKN+A A Sbjct: 173 KIDIQDKDLRIDTFRASGAGGQHVNMTDSAVRITHFPTGIVVQCQNERSQHKNRATAMKQ 232 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 LRA LYE EL+K+ E SK EI +G QIR+YVL PY++VKDLR+ + VL Sbjct: 233 LRACLYEHELEKKRAETRETEDSKLEINFGSQIRNYVLAPYRLVKDLRSKLALGDVDRVL 292 Query: 340 DGDLDDFMKATLAIKK 355 +G LD + + L +K Sbjct: 293 EGGLDPLIHSYLVWRK 308 >gi|297618035|ref|YP_003703194.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM 12680] gi|297145872|gb|ADI02629.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM 12680] Length = 371 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 165/357 (46%), Positives = 234/357 (65%), Gaps = 8/357 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAIS 57 ++ ++L +GG D + R+ L KT P W + EA+ +++E ++ +D+ S Sbjct: 12 EIKKRLEEIGGSLDVEGLKHRIKKLEDKTCQPGFWDDNQEAQKVVKEMSGLKERVDSYES 71 Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 ++EI+D ELA E+D + +E + L R+ + + GE D ++A Sbjct: 72 LVREIEDISALL----ELAEAEEDEELYREAAAELARLNRRFREYELSIMFKGEHDDSNA 127 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + +HAGAGGT++QDW MLLRMYTRWAE ++ + ++ GEEAGIKS TLLIKG A Sbjct: 128 IVSLHAGAGGTDAQDWVEMLLRMYTRWAEDNGYEVDIMDYLPGEEAGIKSVTLLIKGKYA 187 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG ++ E GVHRL+R+SP+D++ RRHTSF+ + V P + D +E+ IS D RIDT+RA G Sbjct: 188 YGKMRAEAGVHRLIRVSPFDASGRRHTSFALVSVLPEIQDDVEVTISSDDLRIDTFRAGG 247 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQHVN TDSAVRITH+P+G+VVQCQ ERSQ+ NK A +LRAKLYEL+ +++EE Sbjct: 248 AGGQHVNKTDSAVRITHLPSGIVVQCQNERSQYANKLAAMKILRAKLYELKQREQEESLQ 307 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIR+YVL P+ +VKD RT +E + + VLDGD++DF+ A L K Sbjct: 308 KLKGEYKEIAWGNQIRTYVLNPFSLVKDHRTGLEVGNVNAVLDGDINDFITAYLGQK 364 >gi|297183299|gb|ADI19436.1| protein chain release factor b [uncultured bacterium HF0500_16O16] Length = 361 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 164/343 (47%), Positives = 226/343 (65%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD + + L+ L+ + W + A+ + +E + L + +E++ RL D Sbjct: 14 FGGIFDIETRQKTLASLDEEMASNEFWNDRQRAEQVTKEARTLRDLTQPWQELKGRLDDL 73 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLEL+ +EDD L++ L + + +F S+LS E D DA L +H+GAGGTE Sbjct: 74 AELLELSADEDDADTLKDLQIELSDVDETLGELEFFSMLSDEDDPKDALLVIHSGAGGTE 133 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA ML+RMY RW E+R F +E +++ G+EAGIK AT+ +KG AYG+LK E GVHR Sbjct: 134 AADWAEMLMRMYGRWIERRGFTSEIMDLQPGDEAGIKGATIEVKGSYAYGYLKAEAGVHR 193 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+D+N RRHTSF+S++VYP VD ++E+ + D +IDTY+A GAGGQHVN T SA Sbjct: 194 LVRISPFDANKRRHTSFASVFVYPDVDSIPDVELRDEDLQIDTYKAGGAGGQHVNKTSSA 253 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV CQ ERSQ KNK A +L A+LY+ Q+ + ES+K I +G Sbjct: 254 VRITHLPTGIVVNCQNERSQLKNKGTAMKVLTARLYDHYKQEEMKKMEAVESTKKAIDFG 313 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV QPY +VKD RT E + ++DGDLD F+ A L+ Sbjct: 314 SQIRSYVFQPYTLVKDHRTGHESGNVQAIMDGDLDGFINAFLS 356 >gi|168205594|ref|ZP_02631599.1| peptide chain release factor 2 [Clostridium perfringens E str. JGS1987] gi|169344216|ref|ZP_02865198.1| peptide chain release factor 2 [Clostridium perfringens C str. JGS1495] gi|169297675|gb|EDS79775.1| peptide chain release factor 2 [Clostridium perfringens C str. JGS1495] gi|170662903|gb|EDT15586.1| peptide chain release factor 2 [Clostridium perfringens E str. JGS1987] Length = 323 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 156/318 (49%), Positives = 221/318 (69%), Gaps = 3/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D +E ++ Sbjct: 6 FWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEIISEVKA 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ + E Sbjct: 65 LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKGYSLET 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ N+ Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML++KL EL E +E+I ++ K ++GWG QIRSYV PY MVKD RTN+E + Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETS 303 Query: 334 SPSDVLDGDLDDFMKATL 351 + + V+DGD+D+F+ A L Sbjct: 304 NVNGVMDGDIDNFIIAYL 321 >gi|224125026|ref|XP_002319484.1| predicted protein [Populus trichocarpa] gi|222857860|gb|EEE95407.1| predicted protein [Populus trichocarpa] Length = 488 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 155/340 (45%), Positives = 222/340 (65%), Gaps = 1/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W + RL L+ + P LW + + A + RE L + ++ ++ L +++ ++ Sbjct: 135 LQWKKLMVRLDLLSVQLNKPDLWDDPVHAGKISREHGSLMAKMKKVRTLEQELLEHIDMI 194 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +LA EEDD + E L +++ K+ E+LLSGE DS Y+EV AGAGGTES DW Sbjct: 195 KLAREEDDNELESEMLKALLQMRRNSNEKEQEALLSGEQDSCPCYIEVQAGAGGTESMDW 254 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M+++MY WA++ + ++ GE AGIK AT+ + G A+G+ K E GVHRLVRI Sbjct: 255 AKMVMQMYKSWAQRHGYGVTVVDEMPGEIAGIKRATIKVDGEYAFGYAKAEAGVHRLVRI 314 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D + I+ESD RI+ +RA GAGGQHVNTT+SAVRI Sbjct: 315 SPFDSGKRRHTSFAAVAVIPILRDGFTHVPINESDLRIERFRAGGAGGQHVNTTESAVRI 374 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ CQ ERSQH NK A +L+++L + E+ ++ ++ S T+IGWG QI Sbjct: 375 VHIPTGITATCQNERSQHMNKDSAMAVLQSRLDQREMARQAQMNAYHTQSLTDIGWGNQI 434 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 RSYVL PY+MVKDLRTN E T+P VL+G++D F+ + L+ Sbjct: 435 RSYVLHPYRMVKDLRTNYEVTNPDSVLEGEIDGFILSYLS 474 >gi|225387178|ref|ZP_03756942.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme DSM 15981] gi|225046726|gb|EEG56972.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme DSM 15981] Length = 338 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 153/321 (47%), Positives = 217/321 (67%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W + ++ ++RE ++L + + +E++ D +++++ EE+D S++ + + Sbjct: 2 EEPGFWDDPEKSTRMVREVKNLKDDVETYRELEQEYDDIQVMIQMGYEENDASVIPDIQE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L +E + + LLSGE D N+A L ++AGAGGTES DW +ML RMY RWAE++ F Sbjct: 62 MLDHFIKTLEDMRLKLLLSGEYDKNNAILRLNAGAGGTESCDWCSMLYRMYCRWAERKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E L+ DG+EAGIKS T+ + G NAYG+L+ E GVHRLVRISP+++ +R TSF S Sbjct: 122 KYEVLDFLDGDEAGIKSVTIQVNGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P ++ +++E++ D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ Sbjct: 182 VMPDIEADLDVEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHMPTGIVVTCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK +A ML+AKLY L+ Q+ A +IGWG QIRSYVLQPY MVKD RT Sbjct: 242 QNKDKAMQMLKAKLYMLKQQESAAKAAGIRGEVKDIGWGNQIRSYVLQPYTMVKDHRTGE 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDG +D F+ A L Sbjct: 302 ESGNVDAVLDGSIDSFISAYL 322 >gi|115311854|sp|Q4L4H9|RF2_STAHJ RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 371 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 165/342 (48%), Positives = 228/342 (66%), Gaps = 3/342 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 G D++N + +P W + +A+ ++ + L + ++ E+++ + D Sbjct: 22 GSLDFENKETNIQEYEEMMTEPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTA 81 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL EE D + + N+ K +V+ + + LL G D+N+A LE+H GAGGTESQ Sbjct: 82 TWELLQEELDGDVKSDLEQNVLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQ 141 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY R+ E++ FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLV Sbjct: 142 DWASMLLRMYQRYGEQQGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLV 201 Query: 192 RISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+ Sbjct: 202 RISPFDSSGRRHTSFASCDVIPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAI 261 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWG 309 RITH PTG+VV Q ERSQ KN+ A ML+AKLY+L+L+++E E+A I + EIGWG Sbjct: 262 RITHHPTGIVVNNQNERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEI-RGEQKEIGWG 320 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV PY MVKD RTN E V+DG++ F+++ L Sbjct: 321 SQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYL 362 >gi|259501054|ref|ZP_05743956.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335] gi|309807259|ref|ZP_07701230.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b] gi|309808840|ref|ZP_07702723.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a] gi|312874339|ref|ZP_07734370.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d] gi|312875084|ref|ZP_07735101.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b] gi|325911468|ref|ZP_08173880.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D] gi|259167748|gb|EEW52243.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335] gi|308166350|gb|EFO68558.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b] gi|308167916|gb|EFO70051.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a] gi|311089374|gb|EFQ47801.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b] gi|311090105|gb|EFQ48518.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d] gi|325476818|gb|EGC79972.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D] Length = 359 Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 162/352 (46%), Positives = 222/352 (63%), Gaps = 14/352 (3%) Query: 8 NC--LGGLFDWDNAVQRLSFLNTKTEDPHLW------QNVIEAKMLMRERQHLDNAISFI 59 NC LGGLFD+DN + ++ K D W Q +IEA MRE+ + Sbjct: 4 NCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREK------VDKY 57 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + + L D +EL E + +L E + ++++K E + LLSG+ D ++A L Sbjct: 58 QTLSSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALL 117 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+H+GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G Sbjct: 118 EIHSGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFG 177 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAG Sbjct: 178 LLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAG 237 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH+N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + Sbjct: 238 GQHINKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEAL 297 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + ++ EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 298 KGNQKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYL 349 >gi|309803856|ref|ZP_07697941.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d] gi|325913296|ref|ZP_08175664.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B] gi|329920534|ref|ZP_08277266.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G] gi|308164090|gb|EFO66352.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d] gi|325477399|gb|EGC80543.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B] gi|328936210|gb|EGG32663.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G] Length = 359 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 160/355 (45%), Positives = 222/355 (62%), Gaps = 12/355 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW------QNVIEAKMLMRERQHLDNAI 56 + + LGGLFD+DN + ++ K D W Q +IEA MRE+ + Sbjct: 1 MKNNYHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREK------V 54 Query: 57 SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116 + + L D +EL E + +L E + ++++K E + LLSG+ D ++ Sbjct: 55 DKYQTLSSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHN 114 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A LE+H+GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G N Sbjct: 115 ALLEIHSGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNN 174 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A+G LK E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+S Sbjct: 175 AFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSS 234 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + Sbjct: 235 GAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQT 294 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + ++ EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 295 EALKGNQKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYL 349 >gi|220905200|ref|YP_002480512.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869499|gb|ACL49834.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 370 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 158/344 (45%), Positives = 221/344 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ L G D + +RL + T+ P W L++E++ L++ ++ + ++ Sbjct: 14 LAQRFASLWGRLDVAASEKRLQAIETEISRPGAWDKPEALTPLLQEKRRLEDEVARLNKL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L LA E +D L+ + + + ++ + LLS E DS DA LE+H Sbjct: 74 KTCHDDMNEWLALAAESEDPEALESLAQQQKDLAALLDETELVMLLSAEEDSQDAILEIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA MLLRMYTRWA +K E L+ G+EAG+KS TL + GP+A+G+LK Sbjct: 134 PGAGGTESQDWAEMLLRMYTRWAADHDYKVEELDFLPGDEAGVKSVTLRVGGPHAFGFLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+G+HRL+RISP+DS+ RRHTSF+S+ V P D IE+++ E+D R+D +R+SG GGQ Sbjct: 194 SERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGDDIELDLKEADLRVDIFRSSGPGGQS 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVRITHIP+G+ QCQ E+SQH NK A +LRA+LY +EL+KRE + Sbjct: 254 VNTTSSAVRITHIPSGISAQCQNEKSQHHNKETALRVLRARLYNMELEKREAARQAQYAG 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 K I +G QIR+Y LQPY++VKD RT E VLDG +D F Sbjct: 314 KDAIAFGSQIRTYTLQPYRLVKDHRTGTEVGDVDAVLDGQIDAF 357 >gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis ATCC 51170] gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis ATCC 51170] Length = 369 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 166/358 (46%), Positives = 237/358 (66%), Gaps = 9/358 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAIS 57 +L + L+ +G + + + + +T + + W + +A+ +M + + + S Sbjct: 13 ELDKNLDMIGSHLNPEKLNTEIKEIEKQTLEENFWDDSQKAQEIMADLSDKKDNFKTFTS 72 Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 F +E++D+ D L ++E + E D L E + L +K E+ + ++ L GE D N+A Sbjct: 73 FKEELKDQ-SDLLDIIEESNE--DLESLNEIEEILNSLKKEIGSFKIKTELDGEYDKNNA 129 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YL +HAGAGG E+ DWA ML+RMYTR+ EKR FK + ++++ E GIKSAT+ +KG A Sbjct: 130 YLVIHAGAGGLEATDWAEMLMRMYTRFFEKRNFKFDVTDLNNEEAGGIKSATIHVKGSFA 189 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+LKGE+GVHRLVRISP+DS+ RRHTSF+S+ ++P ++D + +EI D RIDTYRASG Sbjct: 190 YGYLKGEKGVHRLVRISPFDSSKRRHTSFASVDIFPELNDDMSVEIDPKDLRIDTYRASG 249 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIA 296 AGGQHVN TDSAVRITHIPTGV+ Q ERSQ +NK A +L AKL ++ E + RE+I Sbjct: 250 AGGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIE 309 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +I + + T+I WG QIRSYV PY +VKD RTN E + V+DGD+D F+ LA K Sbjct: 310 DI-QGNYTQIAWGNQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDEYLANK 366 >gi|228474266|ref|ZP_04059001.1| peptide chain release factor 2 [Staphylococcus hominis SK119] gi|314936947|ref|ZP_07844294.1| peptide chain release factor 2 [Staphylococcus hominis subsp. hominis C80] gi|228271625|gb|EEK12972.1| peptide chain release factor 2 [Staphylococcus hominis SK119] gi|313655566|gb|EFS19311.1| peptide chain release factor 2 [Staphylococcus hominis subsp. hominis C80] Length = 332 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 164/322 (50%), Positives = 222/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N +A+ ++ + L + ++ E+ +L D EL EE D I ++ + Sbjct: 4 EPDFWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQEEYDDEIKEDLEQD 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++ FK Sbjct: 64 IVSFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 124 IETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183 Query: 212 YPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P D D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 184 IPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++E E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F++A L Sbjct: 303 EETAKVDAVMDGDIAPFIEAYL 324 >gi|290968807|ref|ZP_06560344.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str. 28L] gi|290781103|gb|EFD93694.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str. 28L] Length = 352 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 155/336 (46%), Positives = 225/336 (66%), Gaps = 2/336 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R+ L+ + DP W + A+ + +E L + + + +++ D LELA+EE Sbjct: 6 ERIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELAMEEK 65 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+ + + + EVE ++ LLSGE D +A + HAGAGGTE+QDW ML+RM Sbjct: 66 DTSLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQMLIRM 125 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTRWAE+ + +++ G+EAG+KSAT + G AYG+LK E+GVHRLVRISP+D+ + Sbjct: 126 YTRWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISPFDAAA 185 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+++ V P + D ++++I+ + R+D +RASGAGGQHVN T SAVR+TH+PTG+V Sbjct: 186 RRHTSFTAVDVMPELPDDVDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLPTGIV 245 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWGRQIRSYVLQP 319 VQCQ ERSQ +NK LRAKL+ELE +K+ ++ A IG + + I WG QIRSYV P Sbjct: 246 VQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQA-IEWGSQIRSYVFHP 304 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 Y +VKD RT++E + V+DG+LD F++ L +K Sbjct: 305 YNLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREK 340 >gi|258616656|ref|ZP_05714426.1| peptide chain release factor 2 in translation [Enterococcus faecium DO] Length = 246 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 149/241 (61%), Positives = 186/241 (77%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+ ++ E L+ G+EAGIKS TLLI Sbjct: 3 DRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLI 62 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG NA+G+LK E+GVHRLVRISP+DS RRHTSF S+ V P +D++I+IEI+ D +IDT Sbjct: 63 KGHNAFGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPELDETIDIEINPDDLKIDT 122 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N T+SAVRITH+PTG VV Q +RSQ KN+ QA ML+AKLY+LE++K+ Sbjct: 123 YRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKK 182 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ A + EIGWG QIRSYV PY MVKD RTN+E + V+DGDLD F+ L Sbjct: 183 EQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 242 Query: 353 I 353 + Sbjct: 243 M 243 >gi|240949505|ref|ZP_04753845.1| peptide chain release factor 2 [Actinobacillus minor NM305] gi|240296078|gb|EER46739.1| peptide chain release factor 2 [Actinobacillus minor NM305] Length = 248 Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 146/245 (59%), Positives = 190/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VD+ I IE++ + Sbjct: 61 SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+NK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E+ K+ E SK++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|325571387|ref|ZP_08146887.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC 12755] gi|325155863|gb|EGC68059.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC 12755] Length = 329 Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 153/277 (55%), Positives = 196/277 (70%) Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE D + E + ++ ++ + LL D N+A +E+H GAGGTESQDW +ML Sbjct: 49 EEADPEMEAELDARIGKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSML 108 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 LRMYTR+ E+ ++ E L+ G+EAGIKS TLL+KG NAYG+LK E+GVHR VRISP+D Sbjct: 109 LRMYTRFCEQHGYQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRFVRISPFD 168 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S RRHTSF S+ V P +D +I++EI+ D +IDTYRASGAGGQH+N T+SAVRITHIP Sbjct: 169 SAKRRHTSFCSVDVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPK 228 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G VV Q +RSQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV Sbjct: 229 GTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVF 288 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLD F+ A L +K Sbjct: 289 HPYSMVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|313906145|ref|ZP_07839494.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6] gi|313469032|gb|EFR64385.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6] Length = 332 Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 164/321 (51%), Positives = 216/321 (67%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W N EA+ +E L N ++ D +++E+ EEDD SI+ E + Sbjct: 2 EEPDFWNNPDEAQKQTKELGDLKNDRDTYAKLVSTKEDIEMMIEMGEEEDDESIVPEVRE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L ++ + ++LLS E D N+A + ++AGAGGTE+ DW ML RMYTRWAE++ F Sbjct: 62 MLDDFIETLDGVRIKTLLSEEYDVNNAIIRLNAGAGGTEAMDWCGMLYRMYTRWAERKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L++ +G+EAGIKS + G NAYG LK E GVHRLVRISP+++ ++R TSF S Sbjct: 122 AIEELDMQEGDEAGIKSVMFQVNGTNAYGLLKSESGVHRLVRISPFNAQAKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P ++D I+IE+ + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ Sbjct: 182 VMPELNDDIDIEVRDEDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVTCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK +A +L+AKLY LE +K+ E A T+I WG QIRSYVLQPY MVKDLRTN Sbjct: 242 QNKDKAMQVLKAKLYMLEQEKQAEKAAGIRGEVTDIAWGHQIRSYVLQPYTMVKDLRTNA 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 EK S VLDGDLD F+ A L Sbjct: 302 EKAQASAVLDGDLDPFINAYL 322 >gi|182624026|ref|ZP_02951814.1| peptide chain release factor 2 [Clostridium perfringens D str. JGS1721] gi|177910919|gb|EDT73273.1| peptide chain release factor 2 [Clostridium perfringens D str. JGS1721] Length = 323 Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 156/318 (49%), Positives = 221/318 (69%), Gaps = 3/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D +E ++ Sbjct: 6 FWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEIISEVKA 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+++ E Sbjct: 65 LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKEYSLET 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ N+ Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML++KL EL E +E+I ++ K ++GWG QIRSYV PY MVKD RTN E + Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNFETS 303 Query: 334 SPSDVLDGDLDDFMKATL 351 + + V+DGD+D+F+ A L Sbjct: 304 NVNGVMDGDIDNFIIAYL 321 >gi|309804632|ref|ZP_07698697.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c] gi|308166024|gb|EFO68242.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c] Length = 359 Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 162/352 (46%), Positives = 222/352 (63%), Gaps = 14/352 (3%) Query: 8 NC--LGGLFDWDNAVQRLSFLNTKTEDPHLW------QNVIEAKMLMRERQHLDNAISFI 59 NC LGGLFD+DN + ++ K D W Q +IEA MRE+ + Sbjct: 4 NCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREK------VDKY 57 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + + L D +EL E + +L E + ++++K E + LLSG+ D ++A L Sbjct: 58 QTLSAALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALL 117 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+H+GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G Sbjct: 118 EIHSGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFG 177 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAG Sbjct: 178 LLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAG 237 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH+N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + Sbjct: 238 GQHINKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEAL 297 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + ++ EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 298 KGNQKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYL 349 >gi|49485626|ref|YP_042847.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650094|ref|YP_185692.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus COL] gi|150393263|ref|YP_001315938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus JH1] gi|56749392|sp|Q6GB76|RF2_STAAS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|56749443|sp|Q7A6R4|RF2_STAAN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|56749454|sp|Q99VM1|RF2_STAAM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|71153100|sp|Q5HHR5|RF2_STAAC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|115311853|sp|Q2YSH5|RF2_STAAB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|189040005|sp|A6TZN3|RF2_STAA2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|49244069|emb|CAG42495.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MSSA476] gi|57284280|gb|AAW36374.1| peptide chain release factor 2, programmed frameshift [Staphylococcus aureus subsp. aureus COL] gi|149945715|gb|ABR51651.1| hypothetical protein SaurJH1_0795 [Staphylococcus aureus subsp. aureus JH1] gi|269940331|emb|CBI48708.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus TW20] Length = 369 Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 167/352 (47%), Positives = 229/352 (65%), Gaps = 3/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K ++ L + G D +N + +P+ W N +A+ ++ + L ++ K Sbjct: 12 KYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D +L EE D + ++ + K +V+ + + LL G D+N+A LE+ Sbjct: 72 LQAEVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 K E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGG Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIG 299 QH+N T+SA+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ E+A I Sbjct: 252 QHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEI- 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 311 RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 362 >gi|323486370|ref|ZP_08091695.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum WAL-14163] gi|323695006|ref|ZP_08109153.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673] gi|323400352|gb|EGA92725.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum WAL-14163] gi|323500950|gb|EGB16865.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673] Length = 335 Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 154/321 (47%), Positives = 224/321 (69%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W + + +RE ++L + + + ++ + D I++E+ EE+D S++ E + Sbjct: 2 EEPGFWDDPERSTKTVREAKNLKDTVETYRHLEQQYEDIQIMIEMGYEENDPSMIPEIQE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L +E + ++LLSGE D+ +A L+++AGAGGTE+ DW +ML RMY RWA+K+ + Sbjct: 62 MLDEFINSLEDIRTKTLLSGEYDNCNAILKLNAGAGGTEAMDWCSMLYRMYQRWADKKGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 TE L+ DG+EAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 TTEVLDFLDGDEAGIKSITVQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ ++IE+++ D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ Sbjct: 182 VMPDIEEDLDIEVNQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK +A ML+AKLY L+ Q+ E + +I +G QIRSYV+QPY +VKD RTN Sbjct: 242 QNKDKAMQMLKAKLYLLKQQENAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTNA 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + + V+DGD+D F+ A L Sbjct: 302 ENGNVNAVMDGDIDLFISAYL 322 >gi|170759975|ref|YP_001785502.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch Maree] gi|169406964|gb|ACA55375.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch Maree] Length = 327 Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 155/322 (48%), Positives = 220/322 (68%), Gaps = 3/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W N+ EA+ + E ++L + + +++ + D + L E+ EEDD + +E Sbjct: 2 QNPNFWNNIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK F Sbjct: 61 EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 SIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASIE 180 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQH Sbjct: 181 VLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQH 240 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +L++KL EL E +E+I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYL 321 >gi|261367680|ref|ZP_05980563.1| peptide chain release factor 2 [Subdoligranulum variabile DSM 15176] gi|282570473|gb|EFB76008.1| peptide chain release factor 2 [Subdoligranulum variabile DSM 15176] Length = 373 Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 152/331 (45%), Positives = 222/331 (67%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +RL+ L + P + + +++ ++ E + N + ++ + + LLE+ EE+ Sbjct: 32 KRLAELEHQMTLPGFYDDQEKSQRVISEMGEVKNKLERFGKLSTQYEEAETLLEMIEEEN 91 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+ E ++ ++ ++ Q ++L+GE D N+A L HAG GGTE+QDWA ML RM Sbjct: 92 DPSLASEGEQAVEGVEKAIDELQLMTMLNGEYDHNNAILTFHAGTGGTEAQDWAEMLYRM 151 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTRWAE + E L++ DG+EAGIKSA+++IKG NAYG LK E GVHRLVRISP+D+N+ Sbjct: 152 YTRWAEAHGYSVEVLDVLDGDEAGIKSASMMIKGANAYGMLKSEHGVHRLVRISPFDANA 211 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RR TSF+S+ V P ++D+I+IEI+ +D + YR+SGAGGQH+N T SAVR+ H PTG+V Sbjct: 212 RRQTSFASLEVMPELNDNIQIEINPADIEMQVYRSSGAGGQHINKTSSAVRLIHKPTGIV 271 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 CQ +RSQ +N+ A M++AKLY++ LQ+ ++ + + + EI WG QIRSYV PY Sbjct: 272 TSCQTQRSQLQNREYAMEMMKAKLYQIALQQHKDKIDDIKGVQNEIAWGHQIRSYVFMPY 331 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +VKD RTN E + V+DGDLD F+ A L Sbjct: 332 TLVKDHRTNYESGNVQAVMDGDLDGFIYAYL 362 >gi|149196339|ref|ZP_01873394.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155] gi|149140600|gb|EDM28998.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155] Length = 332 Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 160/318 (50%), Positives = 215/318 (67%), Gaps = 2/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-ILQETSDNLQ 93 W + AK + L + + KE++ R+ D + L EL EE S ++ + + Sbjct: 6 FWDDSNAAKSTVDRVSALKSVVVPYKELEARVEDFITLSELIEEEGASSELMDDAGEESP 65 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 ++ ++ + S LSG+ DS +L ++AGAGGTES DWA+MLLRMY RWAE + FK Sbjct: 66 ELEKALDDLELLSFLSGKYDSGSCFLSINAGAGGTESCDWADMLLRMYRRWAESKGFKVT 125 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + I +GEEAGIK+ T+ I+GP A+G+LK E+GVHRLVR+SP+DSN RRHTSF+SI V P Sbjct: 126 FVSILEGEEAGIKNCTMFIEGPMAFGYLKAERGVHRLVRVSPFDSNKRRHTSFTSIDVVP 185 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 + D E++I D R+DT+RASGAGGQHVNTTDSA+R+TH+PTG+VV CQ ERSQHKN+ Sbjct: 186 DIGDEAEVDIDAKDLRVDTFRASGAGGQHVNTTDSAIRLTHLPTGIVVSCQMERSQHKNR 245 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A A ML AKL EL+ +RE + K +IGWG QIRSYVL + VKD RTN + Sbjct: 246 ATAMKMLGAKLEELKQAEREAELDANAGEKNDIGWGSQIRSYVLDDRR-VKDHRTNHSTS 304 Query: 334 SPSDVLDGDLDDFMKATL 351 + VLDGD+D F+++ L Sbjct: 305 NTDKVLDGDIDPFIQSFL 322 >gi|309809397|ref|ZP_07703259.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D] gi|312870788|ref|ZP_07730894.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a] gi|312873174|ref|ZP_07733233.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1] gi|315653886|ref|ZP_07906802.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195] gi|308170308|gb|EFO72339.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D] gi|311091407|gb|EFQ49792.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1] gi|311093664|gb|EFQ52002.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a] gi|315488582|gb|EFU78228.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195] Length = 359 Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 162/352 (46%), Positives = 222/352 (63%), Gaps = 14/352 (3%) Query: 8 NC--LGGLFDWDNAVQRLSFLNTKTEDPHLW------QNVIEAKMLMRERQHLDNAISFI 59 NC LGGLFD+DN + ++ K D W Q +IEA MRE+ + Sbjct: 4 NCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREK------VDKY 57 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + + L D +EL E + +L E + ++++K E + LLSG+ D ++A L Sbjct: 58 QTLSSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNDYELHLLLSGKYDDHNALL 117 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+H+GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G Sbjct: 118 EIHSGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFG 177 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAG Sbjct: 178 LLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAG 237 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH+N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + Sbjct: 238 GQHINKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEAL 297 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + ++ EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 298 KGNQKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYL 349 >gi|134302701|ref|YP_001122669.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis WY96-3418] gi|134050478|gb|ABO47549.1| Peptide chain release factor 2 [Francisella tularensis subsp. tularensis WY96-3418] Length = 327 Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 169/323 (52%), Positives = 228/323 (70%), Gaps = 5/323 (1%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L +++ L+N + + I + L LLEL E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVV--DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + P V D I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 182 ISPEVDDDIDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL + +KDLRT Sbjct: 242 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 +E T+ VLDGDLD F++A+L Sbjct: 301 GVENTNTQAVLDGDLDKFIEASL 323 >gi|148543602|ref|YP_001270972.1| peptide chain release factor 2 [Lactobacillus reuteri DSM 20016] gi|184153010|ref|YP_001841351.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112] gi|227363435|ref|ZP_03847559.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3] gi|325681956|ref|ZP_08161474.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A] gi|148530636|gb|ABQ82635.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus reuteri DSM 20016] gi|183224354|dbj|BAG24871.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112] gi|227071535|gb|EEI09834.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3] gi|324978600|gb|EGC15549.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A] Length = 332 Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 158/319 (49%), Positives = 210/319 (65%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ ++ E L ++D++ D LEL E D + +E + Sbjct: 4 PDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSLELLAVEPDDDLQKEFEASF 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + +E + LL GE D+ +A LE+H GAGGTE+QDW MLLRMY RW E+ F Sbjct: 64 TNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHGFSV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 124 ETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DDS+E++I SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V Q ERSQ +N Sbjct: 184 PELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQLQN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + A NML++KLYELE +K+ + E + +IGWG QIRSYV PY +VKD RT E Sbjct: 244 RVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTGYET 303 Query: 333 TSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 304 HNGQAVMDGDLDPFIDAFL 322 >gi|226226984|ref|YP_002761090.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27] gi|226090175|dbj|BAH38620.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27] Length = 335 Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 163/320 (50%), Positives = 219/320 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + A+ ++++ + L + +Q R+ L EL E D + + Sbjct: 3 DPAFWNDQEHAREIVQQVKVLKGWVEPSDSLQSRIDSARELDELLSLEPDKGMNADLDQE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +QRI +++ + +SLL G D DA LE+ AGAGGTE+QDWA+MLLR+YTRWAE++ F Sbjct: 63 VQRILADLDAFELKSLLRGNDDYRDAQLEISAGAGGTEAQDWASMLLRLYTRWAERKGFD 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L++ DGEEAGIK A L IKG AYG+L+ E GVHRLVRISP+DS +RRHTSF+S++V Sbjct: 123 LEVLDLSDGEEAGIKGAVLEIKGQYAYGFLRPESGVHRLVRISPFDSQARRHTSFASVFV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YPVV++ I IEI E D RID YRASGAGGQHVN T SAVRITHIP+G+V QQERSQ K Sbjct: 183 YPVVNEEINIEIREEDLRIDVYRASGAGGQHVNKTSSAVRITHIPSGIVCASQQERSQFK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NKA A L+ +LY+LE++K+ + +++K ++ +G QIRSYV QPY MV D R+ ++ Sbjct: 243 NKATAMKQLKNRLYQLEIEKQAAVKAAFDANKQDVTFGSQIRSYVFQPYTMVNDHRSELK 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGD+D F+ A L Sbjct: 303 IADVQKVMDGDIDPFIHAYL 322 >gi|331000229|ref|ZP_08323913.1| peptide chain release factor 2 [Parasutterella excrementihominis YIT 11859] gi|329572395|gb|EGG54048.1| peptide chain release factor 2 [Parasutterella excrementihominis YIT 11859] Length = 280 Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 150/277 (54%), Positives = 206/277 (74%), Gaps = 1/277 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EEDD + L+ ++ +K EVE+ +F+ + + E D + +LE+ AGAGGTE+QDWA Sbjct: 1 MAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +ML RMY ++AE++ FK E +E +G+ AGIK T+ I G AYGWL+ E G+HRLVR S Sbjct: 61 SMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETGIHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+ TDSAVRITH Sbjct: 121 PFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG+V Q RSQH+NK +A +L+++LYE EL+KR+ E +K++I WG QIRS Sbjct: 181 IPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDISWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL + VKDLRTN+E + + VLDG L+ F++A+L Sbjct: 241 YVLDQSR-VKDLRTNVETGNTTAVLDGALESFIEASL 276 >gi|262283020|ref|ZP_06060787.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus sp. 2_1_36FAA] gi|262261272|gb|EEY79971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus sp. 2_1_36FAA] Length = 347 Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 161/341 (47%), Positives = 218/341 (63%), Gaps = 2/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GGLFD + + ++ L K +P W + I A+ +E L ++ D ++ Sbjct: 4 GGLFDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESE 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ILL+ L EDD + + K+ Y + LLS D+N+A LE+H G+GGTE+ Sbjct: 64 ILLDF-LAEDDSVQEELEEKLAELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEA 121 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW +MLLRMYTR+ + FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRL Sbjct: 122 QDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRL 181 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + V Sbjct: 182 VRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGV 241 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VVQ +R+Q+ N+ +A ML+AKLY+LE +K+ + + K EI WG Sbjct: 242 RLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGS 301 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV PY MVKD RT+ E V+DGDLD F+ A L Sbjct: 302 QIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYL 342 >gi|255987637|ref|YP_001884728.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund 17B] gi|255961470|gb|ACD21926.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund 17B] Length = 325 Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 156/318 (49%), Positives = 221/318 (69%), Gaps = 3/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ + +E + + + I ++ ++ +L D +L E+ +++DD E +N++ Sbjct: 6 FWNDTKRAEEITKESKRIKDKIQRVESVRSKLDDIEVLKEI-MDDDDEESAYEIINNIKE 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 I+ E++ E LLSGE D N+A L +H G GGT++ DW MLLRMYTRW EK+ +K E Sbjct: 65 IEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKNYKVEM 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +++ +G+EAGIKS TL + G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P Sbjct: 125 IDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASMEVLPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +I+I D +IDTYRASGAGGQH+N TDSAVRITH+PTGVVVQCQ ERSQ NK Sbjct: 185 LTKEQDIDIRSEDIKIDTYRASGAGGQHINKTDSAVRITHLPTGVVVQCQNERSQFSNKD 244 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKL EL E +E+I ++ K ++GWG QIRSYV PY +VKD RTN+E + Sbjct: 245 TAMGMLKAKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTNVEVS 303 Query: 334 SPSDVLDGDLDDFMKATL 351 + + V+DGDLD F+ + L Sbjct: 304 NVTAVMDGDLDLFVNSYL 321 >gi|328882777|emb|CCA56016.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712] Length = 367 Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 161/353 (45%), Positives = 220/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D + ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLEKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E DD L E L ++ ++ + +LLSGE D +A + + Sbjct: 73 RGRIDDLAVLFELAEEMDDPDTLAEAEAELTSVRKALDEMEVRTLLSGEYDEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYSTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ S +EI ES+ R+D YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVESSDHVEIDESELRVDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE Q++EE A + Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERQRQEERAKMDALK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 311 DSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQSVLDGEIDGFLEAGIRWRK 363 >gi|18311152|ref|NP_563086.1| peptide chain release factor 2 [Clostridium perfringens str. 13] gi|18145835|dbj|BAB81876.1| peptide chain release factor 2 [Clostridium perfringens str. 13] Length = 323 Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 155/318 (48%), Positives = 221/318 (69%), Gaps = 3/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V +A+ + +E + + + I + + +R+ D +L EL +EE+D +E ++ Sbjct: 6 FWDDVQKAQEVTQEAKRVKDKIDKFRNLNERIDDVEVLKEL-MEENDEETAKEIISEVKA 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ + E Sbjct: 65 LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKGYSLET 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ N+ Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML++KL EL E +E+I ++ K ++GWG QIRSYV PY MVKD RTN+E + Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETS 303 Query: 334 SPSDVLDGDLDDFMKATL 351 + + V+DGD+D+F+ A L Sbjct: 304 NVNGVMDGDIDNFIIAYL 321 >gi|332140695|ref|YP_004426433.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550717|gb|AEA97435.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str. 'Deep ecotype'] Length = 248 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 158/245 (64%), Positives = 191/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG D ND Y+++ +G+GGTE+QDWANMLLRMY RW E FKTE +E+ DG+ AGIK Sbjct: 1 MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SATL I+G A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP +DD I+I+I+ S Sbjct: 61 SATLRIQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E SK++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|108798578|ref|YP_638775.1| peptide chain release factor 2 [Mycobacterium sp. MCS] gi|119867678|ref|YP_937630.1| peptide chain release factor 2 [Mycobacterium sp. KMS] gi|123070429|sp|Q1BBL5|RF2_MYCSS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|166225110|sp|A1UDD2|RF2_MYCSK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|108768997|gb|ABG07719.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. MCS] gi|119693767|gb|ABL90840.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. KMS] Length = 371 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 163/354 (46%), Positives = 229/354 (64%), Gaps = 8/354 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D R+ L + DP+LW + A+ + E H N + ++E+ Sbjct: 12 LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + R+ D +L E+A EE D + E L ++++++E + +LLSGE D +A + Sbjct: 72 RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I++ E+D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL L +K+EE A + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LARKKQEERAEL- 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGI 362 >gi|297181318|gb|ADI17509.1| protein chain release factor b [uncultured bacterium HF0130_06E03] Length = 325 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 154/324 (47%), Positives = 218/324 (67%), Gaps = 2/324 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + A+ + ++ + +I + + + D L E+A + D S L + + Sbjct: 3 DPSFWSDRKNAEKISKQARLFKESIEAWETLTSQHKDLCELQEMAAADGDESALSDLENE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + VE +F S+L G DS +A L +H+GAGGTE+ DWA MLLRMY RW E+ K Sbjct: 63 VDELTKNVESFEFRSMLDGVDDSKNAILVIHSGAGGTEAADWAEMLLRMYNRWTERNGLK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 ++ ++I GEEAGIK T+ + G AYG+LK E GVHRLVRISP+DS RRHTSF+S++V Sbjct: 123 SKVMDIQPGEEAGIKGVTIEVSGEYAYGYLKAEAGVHRLVRISPFDSGGRRHTSFASVFV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP VDD IE+++ + D +I+ YRA GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQ K Sbjct: 183 YPDVDDDIEVDLKDEDLKIEVYRAGGAGGQHVNKTSSAVRITHVPTGIVVQCQNERSQFK 242 Query: 272 NKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NKA A +L A++Y+ ++ ++ +++ + E+SK I +G QIRSYV PY +VKD RTN Sbjct: 243 NKATALKVLTARVYQNIKDEENKKLKEV-ENSKKSIDFGSQIRSYVFHPYNLVKDHRTNY 301 Query: 331 EKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F++A L ++ Sbjct: 302 ETGNVQAVMDGDIDKFIRAFLTLE 325 >gi|126434177|ref|YP_001069868.1| peptide chain release factor 2 [Mycobacterium sp. JLS] gi|166225109|sp|A3PWV0|RF2_MYCSJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|126233977|gb|ABN97377.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. JLS] Length = 371 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 163/354 (46%), Positives = 229/354 (64%), Gaps = 8/354 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D R+ L + DP+LW + A+ + E H N + ++E+ Sbjct: 12 LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + R+ D +L E+A EE D + E L ++++++E + +LLSGE D +A + Sbjct: 72 RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I++ E+D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL L +K+EE A + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LARKKQEERAAL- 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGI 362 >gi|255926563|gb|ABG86573.2| peptide chain release factor 2 [Clostridium perfringens SM101] Length = 364 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 156/327 (47%), Positives = 224/327 (68%), Gaps = 3/327 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K ++ W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D Sbjct: 38 LELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETA 96 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E ++ + E++ + E++LSGE D N+A L +H G GG+++ DW MLLRMYTRW Sbjct: 97 KEIISEVKALSKEIDTLKIETILSGEYDRNNAILTLHTGVGGSDANDWTEMLLRMYTRWC 156 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK+ + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TS Sbjct: 157 EKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 216 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ Sbjct: 217 FASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQN 276 Query: 266 ERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ N+ A ML++KL EL E +E+I ++ K ++GWG QIRSYV PY MVK Sbjct: 277 ERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVK 335 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D RTN+E ++ + V+ GD+D+F+ A L Sbjct: 336 DHRTNVETSNVNGVMGGDIDNFIIAYL 362 >gi|227545120|ref|ZP_03975169.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A] gi|300909208|ref|ZP_07126669.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112] gi|227184908|gb|EEI64979.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A] gi|300893073|gb|EFK86432.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112] Length = 332 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 157/319 (49%), Positives = 210/319 (65%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ ++ E L ++D++ D LEL E D + ++ + Sbjct: 4 PDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAVEPDDDLQKDFEASF 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + +E + LL GE D+ +A LE+H GAGGTE+QDW MLLRMY RW E+ F Sbjct: 64 TNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYIRWGEQHAFSV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 124 ETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DDS+E++I SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V Q ERSQ +N Sbjct: 184 PELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQLQN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + A NML++KLYELE +K+ + E + +IGWG QIRSYV PY +VKD RT E Sbjct: 244 RVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTGYET 303 Query: 333 TSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 304 HNGQAVMDGDLDPFIDAFL 322 >gi|239995055|ref|ZP_04715579.1| Protein chain release factor B, RF-2 [Alteromonas macleodii ATCC 27126] Length = 248 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 158/245 (64%), Positives = 191/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG D ND Y+++ +G+GGTE+QDWANMLLRMY RW E FKTE +E+ +GE AGIK Sbjct: 1 MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSEGEVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SATL ++G A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP +DD I+IEI+ S Sbjct: 61 SATLRVQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIEINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E SK++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|115311855|sp|Q49VV3|RF2_STAS1 RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 373 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 159/322 (49%), Positives = 222/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W N +A+ ++ + L + ++ + ++ L D L LEEDD ++ Q+ + Sbjct: 42 DPTFWDNQEKAQDVIDKNNALKSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLEQS 101 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +Q K E++ + + LL G D+N+A +E+H GAGGTESQDW NMLLRMY R+ E++ F Sbjct: 102 VQDFKNELDQFELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKGFN 161 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + G+EAG+KS TL++KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 162 VEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 221 Query: 212 YPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +++ IEI+I+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 222 IPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 281 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A L++KLY+L+++++E E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 282 KNREAAMKTLKSKLYQLKIEEQEQEMAEI-RGEQKEIGWGSQIRSYVFHPYAMVKDHRTN 340 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F++A L Sbjct: 341 EETGKVDAVMDGDIGPFIEAFL 362 >gi|49483011|ref|YP_040235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA252] gi|56749421|sp|Q6GIN7|RF2_STAAR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|49241140|emb|CAG39818.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA252] Length = 369 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 166/352 (47%), Positives = 229/352 (65%), Gaps = 3/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K ++ L + G D +N + +P+ W N +A+ ++ + L ++ K Sbjct: 12 KYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D +L EE D + ++ + K +V+ + + LL G D+N+A LE+ Sbjct: 72 LQAEVDDMDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWANML RMY R+ EK+ FK + ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWANMLFRMYQRYCEKKGFKVKTVDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 K E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGG Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIG 299 QH+N T+SA+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ E+A I Sbjct: 252 QHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEI- 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 311 RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 362 >gi|168182216|ref|ZP_02616880.1| peptide chain release factor 2 [Clostridium botulinum Bf] gi|237793493|ref|YP_002861045.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657] gi|182674541|gb|EDT86502.1| peptide chain release factor 2 [Clostridium botulinum Bf] gi|229262967|gb|ACQ54000.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657] Length = 325 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 154/322 (47%), Positives = 221/322 (68%), Gaps = 3/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 2 QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK F Sbjct: 61 EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 TVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASIE 180 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQH Sbjct: 181 VLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQH 240 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +L++KL EL E +E+I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYL 321 >gi|303249514|ref|ZP_07335721.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251860|ref|ZP_07533761.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256355|ref|ZP_07538138.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|302651588|gb|EFL81737.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860552|gb|EFM92564.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865181|gb|EFM97081.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 301 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 155/280 (55%), Positives = 208/280 (74%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+ELA+E +D E ++ ++ +F+ + SG+ D+ D Y+++ AG+GGTE+Q Sbjct: 19 LIELAVEAEDEDTFNEAQVEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTEAQ 78 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+HRLV Sbjct: 79 DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHRLV 138 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 139 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINLADLRIDVYRASGAGGQHVNKTESAVR 198 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIP+G+VVQCQ RSQH+NK Q L+AKLYE+E+ K+ + E SK++IGWG Q Sbjct: 199 ITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQVMEESKSDIGWGSQ 258 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 259 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 297 >gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411] gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC 43734] gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411] gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC 43734] Length = 377 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 169/359 (47%), Positives = 228/359 (63%), Gaps = 15/359 (4%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R L K+ DP LW + A+ + E + + + +K + Sbjct: 12 LDGTLTTIEKVLDLDELGDRARELEEKSADPSLWDDPDHAQQVTSELSRVQSKLKKVKGL 71 Query: 63 QDRLCDNLILLELALEE--DDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND 116 + RL D +L ++A EE DD QE + ++ E+E + ++LSGE D + Sbjct: 72 RQRLDDLPVLYDMAEEEAGDDPDAAQEAVQLADTEREELRQEIESLEVTTMLSGEYDERE 131 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A L + + AGG ++ DWA MLLRMYTRWAEK K E +I EEAGIKSAT++I G Sbjct: 132 AVLNIRSAAGGVDAADWAEMLLRMYTRWAEKAGHKVEVYDISYAEEAGIKSATIVIHGEY 191 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 YG L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+S Sbjct: 192 MYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIDENDVRVDVYRSS 251 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A +L+AKL LE +++EE A Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEEQA 309 Query: 297 NI----GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + G+ S + WG Q+R+YVL PYQMVKDLRTN+E PS VLDGDLD F++A + Sbjct: 310 EMDALKGDGSNS---WGNQMRNYVLHPYQMVKDLRTNVEVNDPSKVLDGDLDGFLEAGI 365 >gi|312130867|ref|YP_003998207.1| bacterial peptide chain release factor 2 (brf-2) [Leadbetterella byssophila DSM 17132] gi|311907413|gb|ADQ17854.1| bacterial peptide chain release factor 2 (bRF-2) [Leadbetterella byssophila DSM 17132] Length = 358 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 160/352 (45%), Positives = 231/352 (65%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G+FD+DN ++L L + P W + A+ +++E Q L N +E Sbjct: 9 LRARVTALRGIFDYDNRKEKLGDLENQQAQPEFWNDSDHAQTVVKEIQVLKNWTEAYEEA 68 Query: 63 QDRLCDNLILLELALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L E E + +T + +I E+E K+ +LS E D A +E+ Sbjct: 69 EASISDLETLFEFYQEGEVEEEEVDTEAKKTVQIIEELELKK---MLSSEEDQFSAIIEI 125 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTESQDWA+ML RMY WA+K +K ++ DG+ AGIKSA++ I GP AYG+L Sbjct: 126 NSGAGGTESQDWASMLYRMYLMWAQKHGYKVTQVDWTDGDGAGIKSASMQIDGPLAYGYL 185 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN+RRHTSF+S++ YP+VDD+IE+E+ ++D T R+ GAGGQ Sbjct: 186 KSENGVHRLVRISPFDSNARRHTSFASVYAYPLVDDTIEVEVKDADIEWQTSRSGGAGGQ 245 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++ V++TH PTG+V+ CQ ERSQ NK A NML+++LY++EL+KR E+ Sbjct: 246 NVNKVETKVQLTHKPTGIVIVCQIERSQLANKEHAMNMLKSRLYQIELEKRNAARADIEA 305 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SK +I WG QIR+YV PY++VKD RT E + V+DG++DDF+KA L + Sbjct: 306 SKKKIEWGSQIRNYVFHPYKLVKDARTGHETSDIQRVMDGEIDDFIKAYLML 357 >gi|120402908|ref|YP_952737.1| peptide chain release factor 2 [Mycobacterium vanbaalenii PYR-1] gi|166225112|sp|A1T6D1|RF2_MYCVP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|119955726|gb|ABM12731.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium vanbaalenii PYR-1] Length = 368 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 164/351 (46%), Positives = 222/351 (63%), Gaps = 5/351 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L DP LW + A+ + + H + I+E+ Sbjct: 12 LDATLTTVERVIDVDGLRGRIEQLEKDASDPQLWDDQARAQKVTSDLSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA EE + E L +++ ++E + +LLSGE D +A + + Sbjct: 72 RGRLEDLPVLYELAAEEGGSDEVAEADAELTKLREDIEAMEVRTLLSGEYDEREALVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPYAYGNLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ +RR TSF+ + V PV + + IEI E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQNRRQTSFADVEVLPVTETTDHIEIPEGDVRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + ++ Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LERKRLEERAEM-DAL 308 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + Sbjct: 309 KGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGI 359 >gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus M045] gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus M045] Length = 368 Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 163/355 (45%), Positives = 227/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISPYD+ RR TSF+ + + PVV+ + +EI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPYDNQGRRQTSFAGVEILPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT+ E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|322514782|ref|ZP_08067805.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976] gi|322119244|gb|EFX91374.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976] Length = 301 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 155/280 (55%), Positives = 207/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+ELA+E +D E ++ ++ +F+ + SG+ D+ D Y+++ AG+GGTE+Q Sbjct: 19 LIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTEAQ 78 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+HRLV Sbjct: 79 DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHRLV 138 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 139 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 198 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIP+G+VVQCQ RSQH+NK Q L+AKLYE+E+ K+ E SK++IGWG Q Sbjct: 199 ITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWGSQ 258 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 259 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 297 >gi|32033623|ref|ZP_00133934.1| COG1186: Protein chain release factor B [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207810|ref|YP_001053035.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae L20] gi|126096602|gb|ABN73430.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 301 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 155/280 (55%), Positives = 207/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+ELA+E +D E ++ ++ +F+ + SG+ D+ D Y+++ AG+GGTE+Q Sbjct: 19 LIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTEAQ 78 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+HRLV Sbjct: 79 DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHRLV 138 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 139 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 198 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIP+G+VVQCQ RSQH+NK Q L+AKLYE+E+ K+ E SK++IGWG Q Sbjct: 199 ITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWGSQ 258 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 259 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 297 >gi|73663271|ref|YP_302052.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495786|dbj|BAE19107.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 334 Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 159/322 (49%), Positives = 222/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W N +A+ ++ + L + ++ + ++ L D L LEEDD ++ Q+ + Sbjct: 3 DPTFWDNQEKAQDVIDKNNALKSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLEQS 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +Q K E++ + + LL G D+N+A +E+H GAGGTESQDW NMLLRMY R+ E++ F Sbjct: 63 VQDFKNELDQFELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKGFN 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + G+EAG+KS TL++KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 123 VEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182 Query: 212 YPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +++ IEI+I+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 183 IPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A L++KLY+L+++++E E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 243 KNREAAMKTLKSKLYQLKIEEQEQEMAEI-RGEQKEIGWGSQIRSYVFHPYAMVKDHRTN 301 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F++A L Sbjct: 302 EETGKVDAVMDGDIGPFIEAFL 323 >gi|270264900|ref|ZP_06193164.1| peptide chain release factor 2 [Serratia odorifera 4Rx13] gi|270041198|gb|EFA14298.1| peptide chain release factor 2 [Serratia odorifera 4Rx13] Length = 248 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 155/245 (63%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+K Sbjct: 1 MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS+++YP VDD I+I+I+ + Sbjct: 61 SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDDIDIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QK+ E +K++IGWG QIRSYVL + +KDLRTN+E + VLDGDLD F Sbjct: 181 FEMQKKNADKQQMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTNVETRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|168210100|ref|ZP_02635725.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC 3626] gi|170711768|gb|EDT23950.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC 3626] Length = 323 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 155/318 (48%), Positives = 220/318 (69%), Gaps = 3/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D +E ++ Sbjct: 6 FWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEIISEVKA 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMY RW EK+ + E Sbjct: 65 LSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYIRWCEKKGYSLET 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P Sbjct: 125 IDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVLPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ N+ Sbjct: 185 LTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRD 244 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML++KL EL E +E+I ++ K ++GWG QIRSYV PY MVKD RTN+E + Sbjct: 245 TAMGMLKSKLIELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETS 303 Query: 334 SPSDVLDGDLDDFMKATL 351 + + V+DGD+D+F+ A L Sbjct: 304 NVNGVMDGDIDNFIIAYL 321 >gi|299782886|gb|ADJ40884.1| Peptide chain release factor RF2 [Lactobacillus fermentum CECT 5716] Length = 332 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 158/290 (54%), Positives = 200/290 (68%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +QD++ + + E+ E D + E DN ++ + + E LL G D +DA LE+ Sbjct: 33 LQDQVEELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEI 92 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTE+QDW MLLRMY RWA + F E GEEAGIKS TLLIKG NAYG+L Sbjct: 93 HPGAGGTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYL 152 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI SD R+DT+RASGAGGQ Sbjct: 153 HPEKGVHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQ 212 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T+SAVRITH+PTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E Sbjct: 213 HINKTESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEG 272 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RT E V+DGDLD F+ A L Sbjct: 273 EQREIGWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYL 322 >gi|187777237|ref|ZP_02993710.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC 15579] gi|187774165|gb|EDU37967.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC 15579] Length = 325 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 153/318 (48%), Positives = 222/318 (69%), Gaps = 3/318 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W ++ EA+ + E ++L + +S +++ + D + L ++ EEDD + +E Sbjct: 2 QNPNFWNDIKEAQKITSEEKYLKDKLSKYNHLKNTIEDIIGLSQMLSEEDD-DMGKEILS 60 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + IK E++ + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK F Sbjct: 61 EYKNIKEEIDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 TVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASIE 180 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQH Sbjct: 181 VLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQH 240 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +L+++L EL E +E+I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 241 TNKETAMKVLKSRLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFM 347 E ++ V++GD++ F+ Sbjct: 300 AETSNVDAVMNGDINIFI 317 >gi|325971169|ref|YP_004247360.1| peptide chain release factor 2 [Spirochaeta sp. Buddy] gi|324026407|gb|ADY13166.1| peptide chain release factor 2 [Spirochaeta sp. Buddy] Length = 367 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 165/342 (48%), Positives = 229/342 (66%), Gaps = 8/342 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D + + L TKT + W + A+ L + L ++ KE+ D L D L+ Sbjct: 23 LDPDKMLSEIQKLETKTLEAGFWDDRKGAEQLFAQLNGLKDSYYPWKELIDSLGDMAELM 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ +E D + +E + Q +L+ +Y Q + +LL G+ D ND +L +HAGAGG E+ Sbjct: 83 EIYADEPD-NPEEEAQIDAQITQLKEQYGQLKLKTLLDGKFDKNDCFLTIHAGAGGNEAS 141 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWANML+RMY R+ E+ FK+E L++ + +E GIKSAT+ + GP ++G+LKGE GVHRLV Sbjct: 142 DWANMLMRMYLRYCERNGFKSEVLDLLE-DEGGIKSATIRVSGPYSFGYLKGEAGVHRLV 200 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DS RRHTSF+S++ PV+DD+IEI++ D R+DTYRA GAGGQHVN TDSAVR Sbjct: 201 RISPFDSQKRRHTSFTSVYASPVIDDTIEIDLKPEDYRLDTYRAGGAGGQHVNKTDSAVR 260 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG 309 ITH +G+VVQCQ ERSQ NK A+ ML+++LYE EL+++E + E K EI WG Sbjct: 261 ITHYESGIVVQCQNERSQVMNKDVAFKMLKSRLYEYYRELKEKEHQKDAIE--KKEITWG 318 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV QPY MVKD RT++ + V+DG++ DF++ L Sbjct: 319 SQIRSYVFQPYTMVKDHRTSVTVGNIQAVMDGEIGDFIEGYL 360 >gi|256828464|ref|YP_003157192.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium baculatum DSM 4028] gi|256577640|gb|ACU88776.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium baculatum DSM 4028] Length = 369 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 159/327 (48%), Positives = 217/327 (66%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +RL+ + + P W +++E+ L++ + + + + L +E+A E Sbjct: 32 ERLNEIEKQISSPGAWDKPELLTPVLQEKTQLESRVDEWEALLQARDNALEWVEMASTEQ 91 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 +LQ + L+ + ++E Q +LLS D ++A LE+H GAGGTESQDWA MLLRM Sbjct: 92 TQEMLQALEEALEEMSAKLEAAQMRTLLSDPEDVSEAILEIHPGAGGTESQDWAEMLLRM 151 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R+AE+ FK E L++ G+EAGIKS TL I GP AYG LKGE+G HRL+RISP+DS+ Sbjct: 152 YRRFAERVGFKVELLDLLPGDEAGIKSVTLHIHGPYAYGQLKGEKGTHRLIRISPFDSSG 211 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ VYP IEIEI + D R+D +R+SG GGQ VNTTDSAVR+THIPTG+V Sbjct: 212 RRHTSFASVDVYPDAGQDIEIEIRDEDVRVDIFRSSGPGGQSVNTTDSAVRVTHIPTGLV 271 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 QCQ E+SQHKNK A +L+A+LYELELQK +K I +G QIR+Y LQPY Sbjct: 272 AQCQNEKSQHKNKEAAMKVLKARLYELELQKIASERQAEYVAKGAIAFGSQIRTYTLQPY 331 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++VKD RT + ++ VLDG++D F+ Sbjct: 332 RLVKDHRTGTDTSNVDSVLDGNIDAFI 358 >gi|254785320|ref|YP_003072749.1| peptide chain release factor 2 [Teredinibacter turnerae T7901] gi|242667502|gb|ACS93539.1| peptide chain release factor 2 [Teredinibacter turnerae T7901] Length = 300 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 159/296 (53%), Positives = 215/296 (72%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I+ + + D L++LA+EE+D L++ + ++ ++ +F + SGE D+N Sbjct: 2 VETIENLDHGVTDCRDLIDLAVEENDEDSLEDVQSEIDSLEAQLAILEFRRMFSGEMDAN 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A+L++ +G+GGTE+QDWA M+LRMY RW E + FKT E GE AGIKSAT+ +G Sbjct: 62 NAFLDIQSGSGGTEAQDWAEMILRMYLRWGEDKGFKTTLEEASAGEVAGIKSATIRFEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +DD IEI+I+ +D R+DTYRA Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEIDDDIEIDINPADLRVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN TDSAVRITH PTG+VVQCQ ERSQH N+ +A MLRA++YE E+ KR Sbjct: 182 SGAGGQHVNKTDSAVRITHEPTGIVVQCQSERSQHSNRDKAMKMLRARMYEHEILKRNAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E SK++IGWG QIRSYVL Q +KDLRT I+ ++ VLDG LDDF++A+L Sbjct: 242 KQALEDSKSDIGWGSQIRSYVLDD-QRIKDLRTGIQTSNCQAVLDGKLDDFIEASL 296 >gi|307243612|ref|ZP_07525755.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM 17678] gi|306492981|gb|EFM64991.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM 17678] Length = 348 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 157/317 (49%), Positives = 225/317 (70%), Gaps = 5/317 (1%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---EDDCSILQETSDN 91 W++ ++ +++E + ++ ++ ++ + D ILLEL+ E E+D I D Sbjct: 25 FWEDTDKSNKILQENKTIEVRLTQYSQLITSIEDINILLELSEEDSTEEDQEIENSIIDQ 84 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ + ++ E L SG+ DSN+A L V++G GG ++QDWA MLLRMY RW+E +K Sbjct: 85 VKDARENLDRMTMEMLFSGQYDSNNAILSVNSGTGGLDAQDWAQMLLRMYIRWSESSGYK 144 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + ++I+ EAGIK+AT+L++G NAYG LK E+GVHRLVRISP+DS+ +RHTSF+SI V Sbjct: 145 VKLIDINSDPEAGIKTATILVQGQNAYGHLKSEKGVHRLVRISPFDSSGKRHTSFASIDV 204 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +++ I++EI+++D +IDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQ ERSQH Sbjct: 205 VPELNEDIKVEINQTDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQNERSQHS 264 Query: 272 NKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK A +L AKL +L E + +E I ++ + ++I WG QIRSYV QPY++VKD RTN Sbjct: 265 NKDIAMKLLMAKLIQLKEEENKERIEDL-QGKYSQITWGSQIRSYVFQPYKLVKDHRTNE 323 Query: 331 EKTSPSDVLDGDLDDFM 347 E + V+DG LD+FM Sbjct: 324 ENANVDAVMDGKLDNFM 340 >gi|171058449|ref|YP_001790798.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6] gi|170775894|gb|ACB34033.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6] Length = 300 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 148/296 (50%), Positives = 212/296 (71%), Gaps = 1/296 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 ++ I + L DN L E++ +E D + + + ++ +E +F + S AD + Sbjct: 2 VAAIDHLSSNLADNTELYEMSKDEGDLAGITAIEAEVVELRAMIEKLEFRRMFSNPADPS 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKT + +G+ AGIK+AT+ ++G Sbjct: 62 NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTTIEDESEGDTAGIKAATIKVEGD 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+G L+ E GVHRLVR SP+DS+ RHTSF+S++VYP VDDSIEI+I+ +D R DT+RA Sbjct: 122 YAFGHLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSIEIDINPADVRTDTFRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFEMRKRMEA 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E +KT++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVLDQSR-IKDLRTNVETSATQKVLDGDLDAFIEASL 296 >gi|46580270|ref|YP_011078.1| peptide chain release factor 2, programmed frameshift [Desulfovibrio vulgaris str. Hildenborough] gi|46449687|gb|AAS96337.1| peptide chain release factor 2, programmed frameshift [Desulfovibrio vulgaris str. Hildenborough] gi|311233748|gb|ADP86602.1| hypothetical protein Deval_1446 [Desulfovibrio vulgaris RCH1] Length = 371 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 170/349 (48%), Positives = 226/349 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L Q + L G D RLS + + P W N + +++E+ L+ I+ ++ + Sbjct: 14 LFEQFSTLWGRLDLAGNRHRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEAL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L LA E++ L+ + + R++ +E + LLSG+ D A LE+H Sbjct: 74 ETCRNDVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+QDWA MLLRMY RWA+ +KTE L+ DG+EAGIKS TL I GPNAYG LK Sbjct: 134 PGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE+G+HRL+RISP+D++ RRHTSF+S+ V P V I+IEI ++D RID +R+SG GGQ Sbjct: 194 GERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQS 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+THIPTG+V QCQ E+SQH NK A +LR +LYELEL+K EE + Sbjct: 254 VNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K IG+G QIR+Y LQPY++VKD RTN E VLDG LD ++ L Sbjct: 314 KDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 362 >gi|70727136|ref|YP_254052.1| peptide chain release factor 2 [Staphylococcus haemolyticus JCSC1435] gi|68447862|dbj|BAE05446.1| peptide chain release factor 2 [Staphylococcus haemolyticus JCSC1435] Length = 332 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 162/322 (50%), Positives = 222/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + +A+ ++ + L + ++ E+++ + D EL EE D + + N Sbjct: 3 EPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELLQEELDGDVKSDLEQN 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++ FK Sbjct: 63 VLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 123 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182 Query: 212 YPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 183 IPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+L+L+++E E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 243 KNREAAMKMLKAKLYQLKLEEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 301 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DG++ F+++ L Sbjct: 302 EETGKVDAVMDGEIGPFIESYL 323 >gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083] gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083] Length = 368 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 163/355 (45%), Positives = 227/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKADAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD L E L +K ++ + +LLSGE DS +A + + Sbjct: 73 RSRIDDLAVLFEMAEEEDDSDTLAEAESELTSVKKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE++ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAAM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT+ E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|158321505|ref|YP_001514012.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs] gi|158141704|gb|ABW20016.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs] Length = 340 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 150/276 (54%), Positives = 203/276 (73%), Gaps = 2/276 (0%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 +E+ D S ++ L+ ++ V + +LL GE D N+A + +HAG GG ++QDWA M Sbjct: 58 IEDGDESFQKDLLKGLEALENRVREIKIATLLKGEYDKNNAIISIHAGTGGLDAQDWAKM 117 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMYTRWAE + + + L+I EAGIKS TLLI+G NAYG+LK E+GVHRLVRISP+ Sbjct: 118 LLRMYTRWAEDKGYGVKTLDILTDTEAGIKSVTLLIEGMNAYGYLKAEKGVHRLVRISPF 177 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 DS+ +RHTSF+S+ V P +DDS++I+I+ +D RIDTYRASG+GGQHVN TDSAVRITHIP Sbjct: 178 DSSGKRHTSFASVDVMPEIDDSVDIQINPNDLRIDTYRASGSGGQHVNKTDSAVRITHIP 237 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSY 315 TG+VVQCQ ERSQH N+ A ML +KL E+ E +++E+I ++ + +I WG QIRSY Sbjct: 238 TGIVVQCQNERSQHSNRETAMKMLISKLIEVKETEQKEKIEDL-QGEYNQIAWGSQIRSY 296 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V PY +VKD RTN+E + V+DG++D+F+ L Sbjct: 297 VFNPYNLVKDHRTNVEMGNIQAVMDGEIDEFINGYL 332 >gi|241765770|ref|ZP_04763713.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN] gi|241364339|gb|EER59478.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN] Length = 300 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 153/286 (53%), Positives = 209/286 (73%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L DN L E++ EE D + L +++ E+E +F + S EAD + ++++ AGA Sbjct: 12 LADNAELYEMSKEEGDEAGLLTIEAETAKLRPEIEQLEFRRMFSNEADPLNCFVDIQAGA 71 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+ DWA+MLLR Y ++AE++ FKT E G+ AGIKSAT+ ++G AYG L+ E Sbjct: 72 GGTEACDWASMLLRQYLKYAERKGFKTTVEEETAGDVAGIKSATIKVEGEYAYGLLRTET 131 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS+ RHTSF+S++VYP +DDSI+I+I+ +D R DTYRASGAGGQH+N Sbjct: 132 GVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTYRASGAGGQHINK 191 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E E +KT+ Sbjct: 192 TDSAVRLTHIPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHEMRKRQEEQQKLEDTKTD 251 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +GWG QIRSYVL + +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 252 VGWGHQIRSYVLDNSR-IKDLRTGVEISATQKVLDGDLDAFIEASL 296 >gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2 155] gi|166225108|sp|A0QU58|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2 155] Length = 368 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 163/351 (46%), Positives = 223/351 (63%), Gaps = 5/351 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L DP+LW + A+ + + H N + ++ + Sbjct: 12 LDTTLTTVERVLDVDGLRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQNELRRVEGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA E + E L +++ ++E + +LLSGE D +A + + Sbjct: 72 RQRLDDLPVLYELAAEAGGPDEVAEADAELAKLREDIEAMEVRTLLSGEYDEREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK + E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHAPFAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + IEI E+D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIEIPENDIRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + ++ Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LERKRLEERAEL-DAL 308 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 309 KGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPASVLDGDIDGFLEAGI 359 >gi|256842745|ref|ZP_05548233.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN] gi|256614165|gb|EEU19366.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN] Length = 354 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 163/344 (47%), Positives = 215/344 (62%), Gaps = 2/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLC 67 LGGLFD D + + K P W N +A+ L+ E L + SF+K +Q Sbjct: 2 TLGGLFDLDAIDESIEINENKMAQPDFWNNQEKAQKLISETNRLKEKRDSFLK-LQTSYE 60 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D +EL EE D + +E +L ++ + + + LLSG+ DS++A +E+H GAGG Sbjct: 61 DETTAVELLREEPDPDLQKEVEADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW MLLRMY R+ + FK E + GEEAG+KS + I G NAYG LK E GV Sbjct: 121 TEAMDWGQMLLRMYQRYCDTAGFKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D+ RRHTSF+S+ V P VDDSI+I+I D R+D YR+SGAGGQH+N T Sbjct: 181 HRLVRISPFDAAKRRHTSFASVEVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTS 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+V Q +RSQ +N+ A N LRAKL+ LE +K+ + + + EIG Sbjct: 241 SAVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIG 300 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV PY +VKDLRT E V+DG L F+ + L Sbjct: 301 WGSQIRSYVFHPYNLVKDLRTGHETADAQGVMDGKLQPFIYSYL 344 >gi|296111417|ref|YP_003621799.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154] gi|295832949|gb|ADG40830.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154] Length = 372 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 157/328 (47%), Positives = 216/328 (65%), Gaps = 2/328 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCS 83 F N TE P W + ++A+ ++ E L N + ++ + +L+E+ E+ DD Sbjct: 36 FENRMTE-PGFWDDNVKAQKVIEENNVLKNRRDSFLNLTNQAEEIDVLIEMLSEDPDDVE 94 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 +L E +N+ +I+ +VE E LL+ D+N+A LEVH G+GGTES DW L RMYTR Sbjct: 95 MLAELEENVAKIQKDVEAYNLEQLLTEPYDANNAILEVHPGSGGTESTDWGANLYRMYTR 154 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WA++ F+ + L+ H G+EAGI SAT+ I G NA+G+L+ E+GVHR VRISP+DS RRH Sbjct: 155 WAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLRSEKGVHRFVRISPFDSAGRRH 214 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF S+ V P +DD+IE+E+ + D ++D +R+ GAGGQ+VN + VR+TH PTG+VV Sbjct: 215 TSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVSS 274 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 ER+Q+ N+ A +L+ KLY+LEL+K+E K E GWG QIRSYVL PYQMV Sbjct: 275 TVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTGEKLENGWGSQIRSYVLHPYQMV 334 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KD RTN E P VLDGDLD F+ A L Sbjct: 335 KDHRTNYETNQPQQVLDGDLDPFINAYL 362 >gi|226947396|ref|YP_002802487.1| peptide chain release factor 2 [Clostridium botulinum A2 str. Kyoto] gi|226842678|gb|ACO85344.1| peptide chain release factor 2 [Clostridium botulinum A2 str. Kyoto] Length = 325 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 221/322 (68%), Gaps = 3/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 2 QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK F Sbjct: 61 EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 TIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASIE 180 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQH Sbjct: 181 ILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQH 240 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +L++KL EL E +E+I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYL 321 >gi|15836107|ref|NP_300631.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138] gi|8978947|dbj|BAA98782.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138] Length = 350 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 161/342 (47%), Positives = 223/342 (65%), Gaps = 1/342 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 GLFD D + L L ++ + + WQ+ + A + + L I +E++ ++ Sbjct: 3 GLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEYQELKSKIDAIEF 62 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE A +D +I ++ + ++ + + LLSGEAD N +L ++AGAGGTES Sbjct: 63 FLEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTESC 122 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW ML RMY+RWA K ++ E ++ DGE GIK T+ G AYG+ K E+GVHRLV Sbjct: 123 DWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHRLV 182 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DSN +RHTSF+S+ V+P +DD I+IEI +D RIDT+R+SGAGGQHVN T+SAVR Sbjct: 183 RISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESAVR 242 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+GVVV CQ ERSQ +N+ ML+AKLY+ LQ+R E ++ K EI WG Q Sbjct: 243 ITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWGSQ 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 IR+YV QPY +VKD+RT E + +LDG+ LD+F+KA LA Sbjct: 303 IRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 344 >gi|218779410|ref|YP_002430728.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans AK-01] gi|218760794|gb|ACL03260.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans AK-01] Length = 327 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 148/317 (46%), Positives = 222/317 (70%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + + +++ER + + + +++ + L + +LLEL +EE+D ++E +L + Sbjct: 6 FWDSPDKNTAILKERTSITSLVEGWEKLAEELSEAEVLLELGVEEEDGQTIEEARQHLVK 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 I+ ++ +L GE D+ +A + ++AGAGGT++QDWA MLLRMY RW E++ F Sbjct: 66 IEKGIDKLSLSRMLDGEDDARNAIVAINAGAGGTDAQDWAEMLLRMYLRWVEQKGFSYSI 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAG+K T + G AYG+LK E+GVHRLVRISP++SN +R TSF+S+ VYP Sbjct: 126 IDYQPGDEAGVKGVTFTVTGDYAYGYLKTEEGVHRLVRISPFNSNGKRQTSFASVAVYPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D I ++++E D RID +RASGAGGQHVN T SAVRI HIPTG+VVQCQQE+SQH+N+ Sbjct: 186 IDQEIVVDVNEKDLRIDVFRASGAGGQHVNKTSSAVRILHIPTGIVVQCQQEKSQHRNRD 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A +L+A+LY++E +++++ +K EIG+G QIRSYVL PYQMVKD R N++ + Sbjct: 246 LAMKVLKARLYQVEQEQQQKQMQDNYEAKEEIGFGNQIRSYVLHPYQMVKDHRINMDVGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 + VLDGD+D F++A L Sbjct: 306 VNAVLDGDIDPFIEAVL 322 >gi|222152785|ref|YP_002561962.1| peptide chain release factor 2 [Streptococcus uberis 0140J] gi|254790921|sp|B9DRN6|RF2_STRU0 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|222113598|emb|CAR41450.1| peptide chain release factor 2 [Streptococcus uberis 0140J] Length = 366 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 160/340 (47%), Positives = 219/340 (64%), Gaps = 6/340 (1%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D + ++ L K +P W + I A+ +E L + ++ + + + L Sbjct: 24 LDLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKSTFETFHDMLELSDETELYL 83 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQ 131 E+ E D SI +E + L +KLE Q+E LLS D N+A LE+H G+GGTE+Q Sbjct: 84 EMLAE--DESIKEELEEAL--VKLEQILSQYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 139 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLV Sbjct: 140 DWADMLFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLV 199 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DS RRHTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR Sbjct: 200 RISPFDSAKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVR 259 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIPTG+VV +R+Q+ N+ +A ML+AKLY+LE +K+ E N + K EI WG Q Sbjct: 260 LTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQ 319 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYV PY MVKD RTN E V+DG++D F+ A L Sbjct: 320 IRSYVFTPYTMVKDHRTNFEVAQVDKVMDGEIDGFIDAYL 359 >gi|257424874|ref|ZP_05601301.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257427542|ref|ZP_05603941.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257430173|ref|ZP_05606557.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 68-397] gi|257432874|ref|ZP_05609234.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus E1410] gi|257435778|ref|ZP_05611826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M876] gi|282913594|ref|ZP_06321383.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M899] gi|282918547|ref|ZP_06326284.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C427] gi|282923513|ref|ZP_06331193.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C101] gi|283957586|ref|ZP_06375039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|293500640|ref|ZP_06666491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 58-424] gi|293509587|ref|ZP_06668298.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M809] gi|293524173|ref|ZP_06670860.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M1015] gi|297590314|ref|ZP_06948953.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus MN8] gi|257272444|gb|EEV04567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257275735|gb|EEV07208.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257279370|gb|EEV09971.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 68-397] gi|257282289|gb|EEV12424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus E1410] gi|257284969|gb|EEV15088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M876] gi|282314381|gb|EFB44771.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C101] gi|282317681|gb|EFB48053.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C427] gi|282322626|gb|EFB52948.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M899] gi|283791037|gb|EFC29852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|290921136|gb|EFD98197.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M1015] gi|291095645|gb|EFE25906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 58-424] gi|291467684|gb|EFF10199.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M809] gi|297576613|gb|EFH95328.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus MN8] gi|312438819|gb|ADQ77890.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus TCH60] Length = 331 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 4 EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLEQE 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK Sbjct: 64 VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERSQ Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F+++ L Sbjct: 303 EETGKVDAVMDGDIGPFIESYL 324 >gi|254386617|ref|ZP_05001914.1| peptide chain release factor 2 [Streptomyces sp. Mg1] gi|194345459|gb|EDX26425.1| peptide chain release factor 2 [Streptomyces sp. Mg1] Length = 369 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 161/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDKLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E DD L E + L ++ ++ + +LLSGE +A + + Sbjct: 73 RGRIDDLAVLFELAQEMDDADTLAEAENELTSVRKALDEMEVRTLLSGEYAEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +EI E + RID YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVESSDHVEIDEGELRIDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMDALK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363 >gi|313903604|ref|ZP_07836994.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter subterraneus DSM 13965] gi|313466157|gb|EFR61681.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter subterraneus DSM 13965] Length = 372 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 161/340 (47%), Positives = 218/340 (64%), Gaps = 2/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD + + + +P W + A+ +R+ + L + + + +L D +L Sbjct: 2 IFDLAGKRREIERIEQAMTEPGFWDDPERAQHQVRQLKVLKGPVERYEALDRQLEDLQVL 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ELA EE D S++ E + + +++ + + E LL+G D DA + +H GAGGTESQD Sbjct: 62 AELAAEEADVSVIPELEEGIAQVEEGLRQLELELLLTGPYDGYDAIVSLHPGAGGTESQD 121 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML RMYTRWAE R ++ E L++ +GEEAGIKS T ++GPNAYG+L+ E GVHRLVR Sbjct: 122 WAQMLWRMYTRWAEDRGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLRSEHGVHRLVR 181 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ RRHTSF+S+ V P + DS EIEI D RID +RA G GGQHVN T+SAVRI Sbjct: 182 ISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQHVNKTESAVRI 241 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQ 311 H+PTG+V CQ ERSQH N+ A +L+A+L E Q+ +EIA + EI WG Q Sbjct: 242 VHLPTGIVATCQNERSQHSNRETAMKILKARLARYYEEQRLKEIAAL-RGDVGEIAWGNQ 300 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYV QPY +VKD RT +E + V+DG LD F+ A L Sbjct: 301 IRSYVFQPYTLVKDHRTGVEVGNVQAVMDGQLDVFINAYL 340 >gi|315194373|gb|EFU24765.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus CGS00] Length = 330 Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 3 EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLEQE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK Sbjct: 63 VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 123 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERSQ Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 242 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 301 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F+++ L Sbjct: 302 EETGKVDAVMDGDIGPFIESYL 323 >gi|294055147|ref|YP_003548805.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM 45221] gi|293614480|gb|ADE54635.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM 45221] Length = 386 Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 167/356 (46%), Positives = 230/356 (64%), Gaps = 8/356 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++R+ + D ++ + L + +P W + A+ ++ E L A++ + Sbjct: 14 EITRRAGHIWRYLDGVKKLEEIEALEAQMAEPTFWDDQQAAQKVIAEANRLKAAVNPCRA 73 Query: 62 IQDRLCDNLILLELALE----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 + D +LEL E D + QE D + + +++ + S L+G DS +A Sbjct: 74 FNAEVDDLQAMLELVDEMGGDPDAAAYEQEVLDAVHALLPKLDALELASFLTGPHDSCNA 133 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 L +HAGAGGTES DWA+MLLRMYTRW E+ F + +I GEEAGI SAT+ I+GPNA Sbjct: 134 LLTIHAGAGGTESCDWADMLLRMYTRWGERAGFTVDIQDIMPGEEAGISSATIRIEGPNA 193 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+ K E+GVHRLVRISP+DSN+RRHTSFSS+ V ++D I+++I ES+ R D YRASG Sbjct: 194 YGYAKAERGVHRLVRISPFDSNARRHTSFSSVDVIAEIEDDIDLDIPESEIRTDVYRASG 253 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIA 296 GGQHVN T+SAVR+THIPT +VV CQ ERSQ KNKA A L+++LYE L +KR E+ Sbjct: 254 KGGQHVNRTESAVRLTHIPTNLVVTCQNERSQIKNKATAMRTLKSRLYEKMLDEKRSEME 313 Query: 297 NI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GE K +I WG QIRSYV QPYQ+V DLRT +++ + V+DG+LD F+ A L Sbjct: 314 KFYGE--KGDIAWGNQIRSYVFQPYQLVTDLRTGLKEGNVQGVMDGELDPFVHAWL 367 >gi|282903384|ref|ZP_06311275.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C160] gi|282596339|gb|EFC01300.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C160] Length = 331 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 4 EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLEQE 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK Sbjct: 64 VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERSQ Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F+++ L Sbjct: 303 EETGKVDAVMDGDVGPFIESYL 324 >gi|297626158|ref|YP_003687921.1| peptide chain release factor 2 (RF-2) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921923|emb|CBL56483.1| Peptide chain release factor 2 (RF-2) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 369 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 159/347 (45%), Positives = 219/347 (63%), Gaps = 2/347 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L++ L+ + + D +++ L T+ P LW + A+ + L +++ ++ Sbjct: 12 QLNKSLSSIEAVVDVPAKNKQIEELETEASAPDLWNDQEHAQSVTSRLSRLQSSVEKVQT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D LLELA EE D QE + + E++ + ++LLSGE D DA + + Sbjct: 72 LRSRLDDASTLLELASEESDADTAQEAEKEIATLADEIDTLEVQTLLSGEYDERDALVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + AGG ++ D+A MLLRMY RWAE+ + E +I EEAGIKSAT +K P AYG L Sbjct: 132 RSEAGGVDAADFAAMLLRMYERWAERHAYSYEVYDISYAEEAGIKSATFTVKSPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ I+I E D R+D + ASG GGQ Sbjct: 192 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDNIDIPEKDIRVDVFHASGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA +L+AKL E Q+RE + +S Sbjct: 252 GVNTTDSAVRITHLPTGIVVTCQNERSQIQNKAAGLRVLQAKLLERARQEREAEMDALKS 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 WG Q+RSYVL PYQMVKDLRT E SP +V DGD+D F++ Sbjct: 312 DGN--SWGSQMRSYVLHPYQMVKDLRTGFESGSPDNVFDGDIDGFIE 356 >gi|295092740|emb|CBK78847.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium cf. saccharolyticum K10] Length = 333 Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 153/321 (47%), Positives = 220/321 (68%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W + + LMRE ++L + + ++++ D ++LE+ EE+D S++ E Sbjct: 2 EEPGFWDDPETSTKLMREAKNLKDTVENYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQG 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + ++E + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RW++K+ F Sbjct: 62 MMDDFVAKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWSDKKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 T ++ DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S +R TSF S Sbjct: 122 TTSVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + + +++EI+ + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 182 VMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK A ML+ KLY ++ ++ E + +I +G QIRSYV+QPY +VKD RT Sbjct: 242 QNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTGA 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + + VLDGD+D F+ A L Sbjct: 302 ESGNVNAVLDGDIDLFISAYL 322 >gi|51891274|ref|YP_073965.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM 14863] gi|51854963|dbj|BAD39121.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM 14863] Length = 308 Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 154/295 (52%), Positives = 214/295 (72%), Gaps = 3/295 (1%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ + RL D ++++LA E D + E ++ +V + + LL+G+ D+ +A Sbjct: 4 LESFRRRLDDLEVMIDLAEEASDAEMAAEARAEADALEEQVRQFELQVLLNGKYDAYNAI 63 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L +HAGAGGTE+QDWA MLLRMY RWAE+R FK E L+ DG+EAGIKS T+ ++GP AY Sbjct: 64 LTIHAGAGGTEAQDWAEMLLRMYVRWAERRGFKVEELDRLDGDEAGIKSVTIAVRGPYAY 123 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASG 237 G+L+ E GVHRLVRISP+D++ RRHTSF+++ V P ++D + +IEI D RIDT+R+SG Sbjct: 124 GFLRPEMGVHRLVRISPFDASGRRHTSFAAVEVMPEIEDDVDDIEIRPEDLRIDTFRSSG 183 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIA 296 AGGQHVN T+SAVRITH+PTG+VV CQQERSQ +N+A A MLR+KL EL+++++ +E+A Sbjct: 184 AGGQHVNKTESAVRITHLPTGIVVSCQQERSQMQNRAVAMMMLRSKLVELKIEEQNKEMA 243 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I + EI WG QIRSYV QPY +VKD R+ +E + V+DG+LD F+ L Sbjct: 244 QI-RGPQMEIAWGSQIRSYVFQPYTLVKDHRSGVEVGNAQAVIDGELDPFIYGYL 297 >gi|257464973|ref|ZP_05629344.1| peptide chain release factor 2 [Actinobacillus minor 202] gi|257450633|gb|EEV24676.1| peptide chain release factor 2 [Actinobacillus minor 202] Length = 248 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 145/245 (59%), Positives = 189/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VD+ I IE++ + Sbjct: 61 SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIP+ +VVQCQ RSQH+NK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSCIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E+ K+ E SK++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|150388626|ref|YP_001318675.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF] gi|149948488|gb|ABR47016.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF] Length = 329 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 156/321 (48%), Positives = 223/321 (69%), Gaps = 5/321 (1%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 + W + +A+ +++E + + + I + + D+ + +++ EE D + +E + + Sbjct: 5 NFWDDQDKAQEILKEAKMVKDRIEDYQSVIDQTEEVQMMITFT-EEGDQTFEKELKETIN 63 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 ++ + V+ + +LL G+ D L +HAG GG ++QDWA ML+RMY+RWAE + + E Sbjct: 64 QLDVRVKTMKTATLLQGQYDRFSVILSIHAGTGGLDAQDWAKMLMRMYSRWAEAKGYGVE 123 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 L++ EAGIKS T LI+G NAYG+LKGE+GVHRLVRISP+DS+ +RHTSF+S+ V P Sbjct: 124 ILDLIQDPEAGIKSVTFLIEGINAYGYLKGEKGVHRLVRISPFDSSGKRHTSFASVDVMP 183 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +DDSIE+EI+ +D +IDTYRASGAGGQHVN TDSAVRITHIPTG+VVQCQ +RSQH N+ Sbjct: 184 ELDDSIEVEINPNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGLVVQCQNQRSQHSNR 243 Query: 274 AQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 + ML+AKL EL E +++E+I ++ GE S +I WG QIRSYV PY + KD RTN E Sbjct: 244 ETSMKMLKAKLIELKEREQKEKIEDLQGEYS--QIAWGSQIRSYVFNPYNLAKDHRTNTE 301 Query: 332 KTSPSDVLDGDLDDFMKATLA 352 + V+DGD+D F+ L Sbjct: 302 MGNIQSVMDGDIDLFINEYLT 322 >gi|329120961|ref|ZP_08249592.1| peptide chain release factor RF2 [Dialister micraerophilus DSM 19965] gi|327471123|gb|EGF16577.1| peptide chain release factor RF2 [Dialister micraerophilus DSM 19965] Length = 328 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 153/323 (47%), Positives = 215/323 (66%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ + ++ +A ++ +R LL++A+EEDD + + Sbjct: 3 DPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIEEDDQGMEGDLKQE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ + + K+ E LL+ E D+N+A + HAGAGGTE+QDW ML+RMY +WAE + Sbjct: 63 IEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEGYG 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L + G+EAGIKSA +IKG AYG LK E+GVHRLVRISP+D+ RRHTSFS++ V Sbjct: 123 IEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+PTG+V CQ ERSQ + Sbjct: 183 MPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVAACQNERSQTQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK Q +LRAKL+ELE++K E++ + + I WG QIRSYV QPY +VKD RT +E Sbjct: 243 NKEQCLRILRAKLFELEMKKHEQLKRNIQGEQQAIEWGSQIRSYVFQPYTLVKDNRTGVE 302 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGDL+ F++ L K Sbjct: 303 TGNVQAVMDGDLNPFIEGFLKSK 325 >gi|313891989|ref|ZP_07825590.1| peptide chain release factor 2 [Dialister microaerophilus UPII 345-E] gi|313119632|gb|EFR42823.1| peptide chain release factor 2 [Dialister microaerophilus UPII 345-E] Length = 342 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 153/323 (47%), Positives = 215/323 (66%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ + ++ +A ++ +R LL++A+EEDD + + Sbjct: 17 DPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIEEDDQGMEGDLKQE 76 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ + + K+ E LL+ E D+N+A + HAGAGGTE+QDW ML+RMY +WAE + Sbjct: 77 IEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEGYG 136 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L + G+EAGIKSA +IKG AYG LK E+GVHRLVRISP+D+ RRHTSFS++ V Sbjct: 137 IEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAVDV 196 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+PTG+V CQ ERSQ + Sbjct: 197 MPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVAACQNERSQTQ 256 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK Q +LRAKL+ELE++K E++ + + I WG QIRSYV QPY +VKD RT +E Sbjct: 257 NKEQCLRILRAKLFELEMKKHEQLKKNIQGEQQAIEWGSQIRSYVFQPYTLVKDNRTGVE 316 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 + V+DGDL+ F++ L K Sbjct: 317 TGNVQAVMDGDLNPFIEGFLKSK 339 >gi|325264746|ref|ZP_08131475.1| peptide chain release factor 2 [Clostridium sp. D5] gi|324030038|gb|EGB91324.1| peptide chain release factor 2 [Clostridium sp. D5] Length = 310 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 160/308 (51%), Positives = 220/308 (71%), Gaps = 3/308 (0%) Query: 50 QHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 QHL +K+I+ D+ +L+E++ EE D + + L R + E E + ++ Sbjct: 2 QHLKALQESVKQIEQLYADHEDIGLLIEMSEEEPDDETIGGIEEELDRFEEEFEELRIQT 61 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 LL+GE DS+ A + +HAGAGGTES DWANML RMY+RWAEK+ F E L+ DG+ AGIK Sbjct: 62 LLTGEYDSSSAIVTLHAGAGGTESCDWANMLYRMYSRWAEKKGFSLEVLDYLDGDVAGIK 121 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 T ++G NAYG+L+ E+GVHRLVRISP+++ +R TSF+S V P ++D+I+IEI+E Sbjct: 122 GVTFEVEGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEDNIDIEINEE 181 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 + RIDTYR+ GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQH NK +A ML+AKLY Sbjct: 182 ELRIDTYRSGGAGGQHVNKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKAKLYL 241 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 L+ Q++ + + EIG+G QIRSYV+QPY +VKD RTN+E ++ + V+DG+LD F Sbjct: 242 LKQQEQADKVSGIRGEVKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVMDGNLDPF 301 Query: 347 MKATLAIK 354 + A L++K Sbjct: 302 INAYLSMK 309 >gi|295115079|emb|CBL35926.1| bacterial peptide chain release factor 2 (bRF-2) [butyrate-producing bacterium SM4/1] Length = 333 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 153/321 (47%), Positives = 220/321 (68%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W + + LMRE ++L + + ++++ D ++LE+ EE+D S++ E Sbjct: 2 EEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQG 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + ++E + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RWA+K+ F Sbjct: 62 MMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWADKKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 T ++ DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S +R TSF S Sbjct: 122 TTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + + +++E++ + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 182 VMPDIKEDLDVEVNPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK A ML+ KLY ++ ++ E + +I +G QIRSYV+QPY +VKD RT Sbjct: 242 QNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTGA 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + + VLDGD+D F+ A L Sbjct: 302 ESGNVNAVLDGDIDLFISAYL 322 >gi|15923744|ref|NP_371278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu50] gi|15926431|ref|NP_373964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus N315] gi|82750458|ref|YP_416199.1| peptide chain release factor 2 [Staphylococcus aureus RF122] gi|156979082|ref|YP_001441341.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu3] gi|253731382|ref|ZP_04865547.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|255005545|ref|ZP_05144146.2| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794925|ref|ZP_05643904.1| peptide chain release factor 2 [Staphylococcus aureus A9781] gi|262052329|ref|ZP_06024532.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3] gi|296275163|ref|ZP_06857670.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MR1] gi|13700645|dbj|BAB41942.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus N315] gi|14246523|dbj|BAB56916.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu50] gi|82655989|emb|CAI80394.1| peptide chain release factor 2 [Staphylococcus aureus RF122] gi|156721217|dbj|BAF77634.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu3] gi|253724907|gb|EES93636.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257788897|gb|EEV27237.1| peptide chain release factor 2 [Staphylococcus aureus A9781] gi|259159769|gb|EEW44810.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3] gi|283470047|emb|CAQ49258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ST398] gi|285816456|gb|ADC36943.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981] gi|298694086|gb|ADI97308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ED133] gi|312829246|emb|CBX34088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|320141998|gb|EFW33826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA177] gi|329313475|gb|AEB87888.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus T0131] Length = 330 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 3 EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK Sbjct: 63 VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 123 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERSQ Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 242 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 301 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F+++ L Sbjct: 302 EETGKVDAVMDGDIGPFIESYL 323 >gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM 40736] gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM 40736] Length = 368 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 164/355 (46%), Positives = 226/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364 >gi|260663162|ref|ZP_05864054.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN] gi|260552354|gb|EEX25405.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN] Length = 332 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 157/290 (54%), Positives = 200/290 (68%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +QD++ + + E+ E D + E +N ++ + + E LL G D +DA LE+ Sbjct: 33 LQDQVEELALTAEMLQAEPDPELKAELDNNFPGVQEHLRAYRLEQLLDGPYDQSDAILEI 92 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTE+QDW MLLRMY RWA + F E GEEAGIKS TLLIKG NAYG+L Sbjct: 93 HPGAGGTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYL 152 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI SD R+DT+RASGAGGQ Sbjct: 153 HPEKGVHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQ 212 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T+SAVRITH+PTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E Sbjct: 213 HINKTESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEG 272 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY +VKD RT E V+DGDLD F+ A L Sbjct: 273 EQREIGWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYL 322 >gi|295109041|emb|CBL22994.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus obeum A2-162] Length = 334 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 151/321 (47%), Positives = 216/321 (67%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P W + ++ M+E + + + + ++ ++ D ++E+ EE+D I+ E + Sbjct: 2 EAPDFWDDAEVSQKKMKELKSMKDDMEIYHSLESQMEDMETMIEMGYEENDPEIIPEIQE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + + + ++LLSGE DS +A ++++AGAGGTE+ DW ML RMY+RW +++ F Sbjct: 62 MLDEFEKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 TMEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH Sbjct: 182 VMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK +A ML+AKL+ L+ Q+ E + T+IGWG QIRSYV+QPY MVKD RT+ Sbjct: 242 MNKDKAMQMLKAKLFLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTSE 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDG++D F+ A L Sbjct: 302 ETGNVDAVLDGEIDPFINAYL 322 >gi|220932479|ref|YP_002509387.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix orenii H 168] gi|219993789|gb|ACL70392.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix orenii H 168] Length = 331 Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 163/322 (50%), Positives = 225/322 (69%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS--ILQETS 89 DP LW + +A+ + R+ + + + I +K++ + + +++ELA EED+ + + E Sbjct: 3 DPGLWDDNKKAREITRKSKVVKDRIKSLKKLDELREEAEVMIELA-EEDETNRELWSEVE 61 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 D + ++ +++ + + L+GE D +A L +H GAGGTESQDWA+MLLRMY RWAE Sbjct: 62 DYINSLEEKIDKMELKFRLNGEYDDCNAILSIHPGAGGTESQDWADMLLRMYVRWAESHG 121 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L+ G+EAGIK TLLI G +YG+LKGE+GVHRLVRISP+DS+ RRHTSF+S+ Sbjct: 122 YKVETLDYLPGDEAGIKRVTLLISGEYSYGYLKGEKGVHRLVRISPFDSSGRRHTSFASV 181 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IE++I D +I+TYRASGAGGQHVN TDSAVRITHIPTG+VVQCQ ERSQ Sbjct: 182 NVIPEIDDDIEVDIDTGDLKIETYRASGAGGQHVNKTDSAVRITHIPTGIVVQCQNERSQ 241 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK A +L+A+L EL+ + R E EI WG QIRSYV PY ++KD RT Sbjct: 242 HKNKKMAMMILKARLLELKKEARAEKIEELRGENKEIAWGNQIRSYVFHPYNLIKDHRTG 301 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E+ + V+DG +D+F++A L Sbjct: 302 LEEGNVQKVMDGYIDEFIEAYL 323 >gi|320547182|ref|ZP_08041476.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812] gi|320448169|gb|EFW88918.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812] Length = 336 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 160/331 (48%), Positives = 214/331 (64%), Gaps = 6/331 (1%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L K +P W + I A+ +E L E+Q+ + + LE+ L+EDD Sbjct: 5 IALLENKMTEPDFWNDNIAAQKTSQELNSLKQTYETFNEMQELSDETELYLEM-LDEDDS 63 Query: 83 --SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 S L+ET + L +I E LLS D N+A LE+H G+GGTE+QDWA+ML RM Sbjct: 64 IQSELEETLEKLDKIMTSYE---MTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRM 120 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+ + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 121 YTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSFSS+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Sbjct: 181 RRHTSFSSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY Sbjct: 241 VASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY 300 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RT E V+DGD+D F+ A L Sbjct: 301 TMVKDHRTGYEVAQVDKVMDGDIDGFIDAFL 331 >gi|125543555|gb|EAY89694.1| hypothetical protein OsI_11230 [Oryza sativa Indica Group] Length = 468 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 155/335 (46%), Positives = 216/335 (64%), Gaps = 1/335 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W ++R L+ E P LW + + A + RE L I + + + L +++ +L Sbjct: 122 LKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDML 181 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 LA EEDD + ET L ++ + K+ +LLSG+ DS ++EV AGAGGTES DW Sbjct: 182 RLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDW 241 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M++ MY+ WA++R + +E GE AGIK AT+ + G A+G+ K E GVHRLVRI Sbjct: 242 AAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 301 Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D S +I +SD RI+ +R+ G GGQH N T+SAVRI Sbjct: 302 SPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRI 361 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ ++ S +EI WG QI Sbjct: 362 VHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGNQI 421 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 RSYVL PY+MVKDLRTN E + P VL+GDLDDF+ Sbjct: 422 RSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 456 >gi|148267214|ref|YP_001246157.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus JH9] gi|151220935|ref|YP_001331757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. Newman] gi|221141228|ref|ZP_03565721.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315812|ref|ZP_04839025.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732798|ref|ZP_04866963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus TCH130] gi|258418241|ref|ZP_05682506.1| peptide chain release factor 2 [Staphylococcus aureus A9763] gi|258430733|ref|ZP_05688445.1| peptide chain release factor 2 [Staphylococcus aureus A9299] gi|258440954|ref|ZP_05690789.1| peptide chain release factor 2 [Staphylococcus aureus A8115] gi|258445784|ref|ZP_05693961.1| peptide chain release factor 2 [Staphylococcus aureus A6300] gi|258449595|ref|ZP_05697697.1| peptide chain release factor 2 [Staphylococcus aureus A6224] gi|258452962|ref|ZP_05700956.1| peptide chain release factor 2 [Staphylococcus aureus A5948] gi|258453995|ref|ZP_05701967.1| peptide chain release factor 2 [Staphylococcus aureus A5937] gi|269202375|ref|YP_003281644.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ED98] gi|282895050|ref|ZP_06303271.1| peptide chain release factor 2 [Staphylococcus aureus A8117] gi|282916096|ref|ZP_06323859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus D139] gi|282922051|ref|ZP_06329748.1| peptide chain release factor 2 [Staphylococcus aureus A9765] gi|282926620|ref|ZP_06334250.1| peptide chain release factor 2 [Staphylococcus aureus A10102] gi|283769917|ref|ZP_06342809.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus H19] gi|297208519|ref|ZP_06924948.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912611|ref|ZP_07130054.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus TCH70] gi|304381625|ref|ZP_07364275.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|147740283|gb|ABQ48581.1| bacterial peptide chain release factor 2 (bRF-2) [Staphylococcus aureus subsp. aureus JH9] gi|150373735|dbj|BAF66995.1| peptide chain release factor 2, programmed frameshift [Staphylococcus aureus subsp. aureus str. Newman] gi|253729163|gb|EES97892.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus TCH130] gi|257839034|gb|EEV63513.1| peptide chain release factor 2 [Staphylococcus aureus A9763] gi|257849405|gb|EEV73375.1| peptide chain release factor 2 [Staphylococcus aureus A9299] gi|257852468|gb|EEV76389.1| peptide chain release factor 2 [Staphylococcus aureus A8115] gi|257855360|gb|EEV78298.1| peptide chain release factor 2 [Staphylococcus aureus A6300] gi|257857103|gb|EEV80002.1| peptide chain release factor 2 [Staphylococcus aureus A6224] gi|257859473|gb|EEV82327.1| peptide chain release factor 2 [Staphylococcus aureus A5948] gi|257863860|gb|EEV86616.1| peptide chain release factor 2 [Staphylococcus aureus A5937] gi|262074665|gb|ACY10638.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ED98] gi|282320044|gb|EFB50391.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus D139] gi|282591513|gb|EFB96585.1| peptide chain release factor 2 [Staphylococcus aureus A10102] gi|282593709|gb|EFB98701.1| peptide chain release factor 2 [Staphylococcus aureus A9765] gi|282762546|gb|EFC02685.1| peptide chain release factor 2 [Staphylococcus aureus A8117] gi|283460064|gb|EFC07154.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus H19] gi|296886774|gb|EFH25678.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886857|gb|EFK82059.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus TCH70] gi|302332463|gb|ADL22656.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus JKD6159] gi|302750651|gb|ADL64828.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339988|gb|EFM05932.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315129439|gb|EFT85432.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus CGS03] gi|315196430|gb|EFU26781.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus CGS01] gi|320139911|gb|EFW31772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA131] gi|323438713|gb|EGA96454.1| peptide chain release factor 2 [Staphylococcus aureus O11] gi|329723780|gb|EGG60308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 21189] gi|329724575|gb|EGG61082.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 21172] gi|329729572|gb|EGG65973.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 21193] Length = 331 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 4 EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQE 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK Sbjct: 64 VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERSQ Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F+++ L Sbjct: 303 EETGKVDAVMDGDIGPFIESYL 324 >gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14] gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14] Length = 371 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 161/355 (45%), Positives = 227/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT+ E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|256372525|ref|YP_003110349.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM 10331] gi|256009109|gb|ACU54676.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM 10331] Length = 369 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 153/324 (47%), Positives = 218/324 (67%), Gaps = 2/324 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP +W + + + L R L + + I + L D+ + +E+A +DD + E D Sbjct: 42 DPGVWSDPAKGRELSRRYGTLKDDVELIARLDAMLADSNVAIEMA--DDDPDLAAEAEDV 99 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + ++ + SLL+GE D +DA LE+H+GAGGT++QDWA M+LRMY RWA+ R F+ Sbjct: 100 LTSLAAHLDAIEIRSLLAGEFDESDAVLEIHSGAGGTDAQDWAQMMLRMYERWAQGRGFE 159 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E E+ +G+EAGI SAT +++G AYG L E+GVHRLVRISP+D+ RR TSF+S+ V Sbjct: 160 FEVDEVTEGQEAGILSATAIVRGRYAYGLLVAERGVHRLVRISPFDAQHRRQTSFASLDV 219 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P+ +D+ E+ I E D RIDTYR+SGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ + Sbjct: 220 TPLAEDAGEVVIDEKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTGIVVSCQNERSQLQ 279 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+A+A +L +KL + +++ + + ++GW Q+RSYVL PYQ+VKD R+ E Sbjct: 280 NRAKAMQILVSKLEQRRREEQRAQLDALSGPRVDVGWANQVRSYVLAPYQLVKDHRSGYE 339 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 + VLDG LD F++A LA ++ Sbjct: 340 DRNVQAVLDGRLDPFIEAFLAWRR 363 >gi|115452569|ref|NP_001049885.1| Os03g0305700 [Oryza sativa Japonica Group] gi|108707729|gb|ABF95524.1| peptide chain release factor 2 family protein, expressed [Oryza sativa Japonica Group] gi|113548356|dbj|BAF11799.1| Os03g0305700 [Oryza sativa Japonica Group] gi|215707188|dbj|BAG93648.1| unnamed protein product [Oryza sativa Japonica Group] Length = 468 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 155/335 (46%), Positives = 216/335 (64%), Gaps = 1/335 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W ++R L+ E P LW + + A + RE L I + + + L +++ +L Sbjct: 122 LKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDML 181 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 LA EEDD + ET L ++ + K+ +LLSG+ DS ++EV AGAGGTES DW Sbjct: 182 RLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDW 241 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M++ MY+ WA++R + +E GE AGIK AT+ + G A+G+ K E GVHRLVRI Sbjct: 242 AAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 301 Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D S +I +SD RI+ +R+ G GGQH N T+SAVRI Sbjct: 302 SPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRI 361 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ ++ S +EI WG QI Sbjct: 362 VHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGNQI 421 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 RSYVL PY+MVKDLRTN E + P VL+GDLDDF+ Sbjct: 422 RSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 456 >gi|227486869|ref|ZP_03917185.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541969|ref|ZP_03972018.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092943|gb|EEI28255.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182412|gb|EEI63384.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51866] Length = 366 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 159/350 (45%), Positives = 223/350 (63%), Gaps = 5/350 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L + + D D +R L DP LW + A+ + + H + + ++ + Sbjct: 12 LSDTLTTIEKVLDLDALAERARELELTAADPTLWDDPTNAQKVTSDLSHTQSTLKKVRAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ ELA EE + + L + D ++ +E + +++LSGE D DA + + Sbjct: 72 RQRVDDLPVMYELAEEEGEGTELAD--DERADLRQAIESMEVQTMLSGEYDERDAVVTIR 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK K + + EEAGIKSAT + P YG L Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKEGHKVQVFDTSYAEEAGIKSATFQVSDPYMYGTLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ +RR TSF+ + V PVV+ + I+I +SD R+D YR+SG GGQ Sbjct: 190 VEQGTHRLVRISPFDNQARRQTSFAEVEVLPVVEKTDHIDIPDSDVRVDVYRSSGPGGQS 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301 VNTTDSAVRITHIPTG+VV CQ E+SQ +N+A A +L+++L LE +++EE A + Sbjct: 250 VNTTDSAVRITHIPTGIVVTCQNEKSQIQNRASAMAVLQSRL--LERKRQEEQAEMDALG 307 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F++A + Sbjct: 308 AGGEASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLEAGI 357 >gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S] gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707] gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S] gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707] Length = 367 Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 160/352 (45%), Positives = 230/352 (65%), Gaps = 6/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + + H + + ++E Sbjct: 11 ELDTTLTTVEKVLDVEELRRRIDELEHQASDPELWNDQEHAQQVTSQLSHAQSELRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L ELA EE ++ ++ Q ++ ++E + +++LSGE D DA + + Sbjct: 71 LRSRLDDMAVLYELAEEEGPEAVADAHAERAQ-LRTDIEAMEVKTMLSGEYDQRDALVNI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ DWA ML+RMY RWAEKR + E + EEAGIKSAT +K P +YG L Sbjct: 130 RAGAGGVDAADWAEMLMRMYIRWAEKRGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+SG GGQ Sbjct: 190 SIEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A +L+AKL LE +++EE A + ++ Sbjct: 250 SVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LERKRQEERAEM-DA 306 Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDG++D F++A + Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGEIDGFIEAGI 358 >gi|118444993|ref|YP_878978.1| peptide chain release factor 2 [Clostridium novyi NT] gi|118135449|gb|ABK62493.1| peptide chain release factor 2 [Clostridium novyi NT] Length = 337 Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 167/328 (50%), Positives = 233/328 (71%), Gaps = 2/328 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +RL L K ++ W ++ +A+ + +E + + + I + R+ D +L+E+++EE+ Sbjct: 3 KRLGELEHKMQESDFWDDINKAQEITQEAKGIKDRIDGYNSTKTRIEDLEVLIEMSIEEE 62 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S ++E + ++ I+ ++ + E LLSGE D N+A + +H+GAGGT++QDW MLLRM Sbjct: 63 DESSIEEILNEVEEIESIIDNFKVEILLSGEYDKNNAIVTLHSGAGGTDAQDWTEMLLRM 122 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTRWAEKR +K + L+I G+EAGIKSA L I G AYG+LK E+G+HRLVRISP+++N Sbjct: 123 YTRWAEKRGYKVDVLDILPGDEAGIKSANLKITGEFAYGYLKAEKGIHRLVRISPFNANG 182 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +R TSF+S+ V P + ++ +IEI D RIDTYRASGAGGQH+N TDSAVRITHIPTG+V Sbjct: 183 KRQTSFASLEVIPELKENQDIEIKADDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIV 242 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VQ Q ERSQ +NK A +ML++KL EL E +E+I ++ K EIGWG QIRSYV QP Sbjct: 243 VQSQSERSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLK-EIGWGSQIRSYVFQP 301 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 Y MVKD RTN E + V+DGD+D F+ Sbjct: 302 YTMVKDHRTNTEMGNVDAVMDGDIDIFI 329 >gi|165975783|ref|YP_001651376.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165875884|gb|ABY68932.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 301 Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 154/280 (55%), Positives = 206/280 (73%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+ELA+E +D E ++ ++ +F+ + SG+ D+ D Y+++ AG+GGTE+Q Sbjct: 19 LIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTEAQ 78 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+HRLV Sbjct: 79 DWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHRLV 138 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 139 RKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 198 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIP+ +VVQCQ RSQH+NK Q L+AKLYE+E+ K+ E SK++IGWG Q Sbjct: 199 ITHIPSSIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWGSQ 258 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 259 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 297 >gi|255542882|ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis] gi|223548465|gb|EEF49956.1| peptide chain release factor, putative [Ricinus communis] Length = 550 Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 154/351 (43%), Positives = 226/351 (64%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W + RL L+ + P LW + + A + RE L + Sbjct: 142 IAQSIQVIKKRLQWKKLMVRLDLLSVQLNKPDLWDDPVLAGKISREHGSLMAKRKEVTAF 201 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EEDD + E+ L ++ + K+ E+LL+GE DS Y+EV Sbjct: 202 ERELLEHIDMIKLAREEDDAELESESLKALFHMRRNSKEKELEALLAGEQDSCSCYIEVQ 261 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA M+++MY WA++R + ++ GE AGIK AT+ + G A+G+ K Sbjct: 262 SGAGGTESMDWAKMVMQMYKLWAQRRGYNVTVVDEMPGEIAGIKRATIKVDGEYAFGYAK 321 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P++ D S ++I+ESD RI+ YR+ G GGQ Sbjct: 322 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTHVQINESDLRIERYRSGGPGGQ 381 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTT+SAVRI HIPTGV CQ ERSQH NKA A +L+++L +LE+ ++ ++ Sbjct: 382 HANTTESAVRIVHIPTGVTATCQNERSQHMNKASAMAVLQSRLDQLEMARQAQMNAQHTQ 441 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S TEI WG QIR+YVL PY+MVKDLRTN E + P VL+G++D F+ + L+ Sbjct: 442 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGEIDGFILSYLS 492 >gi|322804442|emb|CBZ01992.1| peptide chain release factor 2 [Clostridium botulinum H04402 065] Length = 325 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 220/322 (68%), Gaps = 3/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 2 QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + IK E + + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK F Sbjct: 61 EYKNIKEETDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 AVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASIE 180 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQH Sbjct: 181 VLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQH 240 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +L++KL EL E +E I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 241 TNKETAMKVLKSKLVELKERSHKERIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYL 321 >gi|114565810|ref|YP_752964.1| peptide chain release factor 2 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336745|gb|ABI67593.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 334 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 154/328 (46%), Positives = 222/328 (67%), Gaps = 4/328 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + KT + W EA+ ++++ L ++ KE+ +LE+A EE+D ++ Sbjct: 1 MQKKTLQENFWSERKEAQEILKQISKLQENLNLYKELMGTAQYLNDILEMAEEENDETLW 60 Query: 86 QETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 QE+ L + L+ +++FE L SG D ++A + +HAGAGGTE+QDW +L RMY+R Sbjct: 61 QESVREL--LALQKRFREFELLVLFSGPHDYSNAIVSLHAGAGGTEAQDWVEILFRMYSR 118 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE + E L+ DG+EAGIKS T L++GP A+G LK E+GVHRL+RISP+DS+ RRH Sbjct: 119 WAENSSYSIEVLDFLDGDEAGIKSVTFLVRGPYAFGKLKCEEGVHRLIRISPFDSSGRRH 178 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S+ V P +++ IE+ I+ D R+DTYR+SGAGGQH+N TDSAVRITH+P+G+VVQC Sbjct: 179 TSFASLSVLPEINEDIEVLINVEDLRVDTYRSSGAGGQHINKTDSAVRITHLPSGIVVQC 238 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q ERSQH N+ A +L+AKLY L+ ++ ++ + EI WG QIR+Y L P+ ++ Sbjct: 239 QNERSQHANRLAAMKILQAKLYALKQKEAQDKLQSIKGDYKEIAWGSQIRTYTLNPFNLI 298 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KD RTN+E + VLDG+LDD + A L Sbjct: 299 KDHRTNMEIGNVQAVLDGELDDLIFACL 326 >gi|312142853|ref|YP_003994299.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus'] gi|311903504|gb|ADQ13945.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus'] Length = 346 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 162/341 (47%), Positives = 222/341 (65%), Gaps = 1/341 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD D + + + W + A+ + L + I E++++ + I Sbjct: 4 FDKDELESEKAAIEKEMAQSGFWDDKENARHKSQRLDKLKKRLKVISELEEKFDEIEIYQ 63 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +LA EE + ++ +E + +++ +++ + + L+ D ++A L +H GAGGTESQDW Sbjct: 64 QLAAEEGE-NLREELEQSFSQLEKKLDNLELKLRLNEPYDDHNAILSIHPGAGGTESQDW 122 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAE ++ E LE G+EAG+KS TLLI G A+G+LKGE+GVHRLVRI Sbjct: 123 AEMLLRMYRRWAESSGYQLETLEFSAGDEAGVKSVTLLISGDYAFGYLKGERGVHRLVRI 182 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS+ RRHTSF+S+ V P +DD +E++I E+D RI+TYRASGAGGQHVN TDSAVRIT Sbjct: 183 SPFDSSGRRHTSFASVDVLPELDDELEVDIDENDLRIETYRASGAGGQHVNKTDSAVRIT 242 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTGVVVQCQ +RSQHKNK A +L +KL EL+ + + E EI WG QIR Sbjct: 243 HQPTGVVVQCQSQRSQHKNKNVAMKILSSKLLELKEEAQAEKIEDLRGEHKEIAWGSQIR 302 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SYVL PY M+KD RT+ E+ + VLDG LD+F++ L K Sbjct: 303 SYVLHPYNMIKDHRTDFEEGNVDKVLDGYLDEFIEEYLKYK 343 >gi|170755895|ref|YP_001779801.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra] gi|169121107|gb|ACA44943.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra] Length = 325 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 152/322 (47%), Positives = 221/322 (68%), Gaps = 3/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W ++ EA+ + E ++L + + +++ + D + L E+ EEDD + +E Sbjct: 2 QNPNFWNDIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + IK E++ + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK F Sbjct: 61 EYKNIKEEIDKFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 TIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASIE 180 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P + + EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQH Sbjct: 181 ILPELTEDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQH 240 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +L++KL EL E +E+I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYL 321 >gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C] gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C] Length = 369 Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 162/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E DD L E L ++ ++ + +LLSGE +A + + Sbjct: 73 RGRIDDLAVLFELAQEMDDADTLAEAEAELVSVRKALDEMEVRTLLSGEYAEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +EI ES+ R+D YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVEIDESELRVDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQARMDALK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363 >gi|284023776|ref|ZP_06378174.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 132] Length = 331 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 162/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 4 EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQE 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK Sbjct: 64 VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERSQ Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F+++ L Sbjct: 303 EETGKVDAVMDGDIRPFIESYL 324 >gi|194246500|ref|YP_002004139.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma mali] gi|193806857|emb|CAP18286.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma mali] Length = 363 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 157/332 (47%), Positives = 224/332 (67%), Gaps = 4/332 (1%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE- 79 +RL LN + W+N +AK + +E + L+ I +++ + D L LL++ E Sbjct: 31 KRLKDLNHLINLSNFWENFEKAKKINQEFKSLNEKIYKMQKFHEEYRDLLSLLKITKENT 90 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 DD L++T L +K ++ + LL+ D +A L +H GAGG ESQDW MLLR Sbjct: 91 DDFLFLEQT---LLSLKKNIQDFEINILLNQTYDKKNAILILHPGAGGIESQDWCEMLLR 147 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY ++A+K+ FK L+ G+ AG+KS +LLIKG AYG+LK E+GVHRLVRISP+DSN Sbjct: 148 MYQKYAQKKNFKIVVLDYQVGDVAGLKSVSLLIKGVYAYGYLKSEKGVHRLVRISPFDSN 207 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 S+RHTSF+S V P ++++IEI+I E + +ID +R+SGAGGQHVNTTDSAVR+TH+PT + Sbjct: 208 SKRHTSFTSCDVLPEINENIEIKIKEEELKIDVFRSSGAGGQHVNTTDSAVRLTHLPTNI 267 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 V+ CQ ERSQ +NK +A +L+ KL++ E++K+E + + + EI WG QIRSY+ P Sbjct: 268 VINCQNERSQTRNKERALQILKTKLFQREIKKQEINLKLIQGVQKEISWGNQIRSYIFHP 327 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YQ+VKD RTN+E V+DGDLD F+ + L Sbjct: 328 YQLVKDHRTNVESYQIESVIDGDLDLFISSFL 359 >gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC 27064] gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC 27064] gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC 27064] Length = 368 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 163/351 (46%), Positives = 221/351 (62%), Gaps = 5/351 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + HL + + + Sbjct: 13 LSSTMGSIESVLDLDRMRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAELRKTEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA EDD L E L ++ ++ + +LLSGE D +A + + Sbjct: 73 RARIDDLGVLFELAEAEDDADTLAEAETELAAVRKALDEMEVRTLLSGEYDEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYMRWAERHGYATEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +EI E++ R+D YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVEIDETELRVDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQARM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K + G WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAAI 360 >gi|298528152|ref|ZP_07015556.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira thiodismutans ASO3-1] gi|298511804|gb|EFI35706.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira thiodismutans ASO3-1] Length = 368 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 153/347 (44%), Positives = 225/347 (64%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 ++ + G D ++ QRL + + P W + + +++E+ L+ ++S +++ Sbjct: 17 QRFSSFWGRLDLESQKQRLEEIEHELSRPGAWDSPEKLTPILKEKSGLEESVSKYEQLHS 76 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + LE A + +LQ D+L+ + ++E + E+LLSG+ D+N A + +H G Sbjct: 77 LQEEVREWLEFADNDQSGEVLQALEDSLETLSRQLEKVELEALLSGKDDNNPAIVSIHPG 136 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDW MLLRMYTRWAE + FK + L+ G+EAG+KS TL + G AYG LK E Sbjct: 137 AGGTEAQDWVEMLLRMYTRWAESKGFKLDYLDYLPGDEAGVKSVTLQVTGEYAYGLLKSE 196 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +G+HRL+RISP+D++ RRHTSF+S+ VYP V D I IE+ E D R+D ++ASG GGQHVN Sbjct: 197 RGIHRLIRISPFDASGRRHTSFASVDVYPQVSDDINIEVKEEDMRVDVFKASGPGGQHVN 256 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SA+RITH+PTG+VVQCQ ERSQ +N+ A +L+AKLY+ E++K E+ ++K Sbjct: 257 KTSSAIRITHMPTGIVVQCQSERSQRRNRDAALKILKAKLYDEEMKKLEDERQEKYAAKD 316 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIR+Y L Y++VKD R N E VLDG++D ++ L Sbjct: 317 SIAWGSQIRTYTLHSYRLVKDHRNNTEIYDVDSVLDGNIDTLIRNYL 363 >gi|331701705|ref|YP_004398664.1| peptide chain release factor 2 [Lactobacillus buchneri NRRL B-30929] gi|329129048|gb|AEB73601.1| Peptide chain release factor 2 [Lactobacillus buchneri NRRL B-30929] Length = 373 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 158/350 (45%), Positives = 227/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + ++ G D D + ++ +K +P W + A+ L+ + L Sbjct: 14 EMQKAIDGFGRSLDLDALSESIAINESKMAEPGFWDDQEAAQKLIDQTNQLKTKRDNFVG 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++++L D + LEL E+ + E + +++K +++ Q LL+G+ D N+A LE+ Sbjct: 74 LKNKLDDLKVTLELIEEDSHSGMEGEFETDEKQLKTKLDRYQLNLLLNGKYDHNNAILEI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTE+QDW +MLLRMYTRWAE F + L+ G+ AG+ S +LLI G NAYG+L Sbjct: 134 HPGAGGTEAQDWGSMLLRMYTRWAEAHGFTVQTLDYQVGDVAGLNSVSLLISGENAYGYL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G+HRLVR+SP+DS RRHTSF+S+ V P ++D + I+I+ D RID YR+SGAGGQ Sbjct: 194 RSEKGIHRLVRLSPFDSAGRRHTSFASVDVMPELNDDVSIDINPDDLRIDVYRSSGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T SAVRITH+PTG+V Q +RSQ +N+ A NML++KLYELE +K+ E E Sbjct: 254 HINKTSSAVRITHLPTGIVAASQAQRSQLQNRQTAMNMLKSKLYELEEEKKAEEKAKIEG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +IGWG QIRSYV PY MVKD RTN E + + V+DGDLD F+ A L Sbjct: 314 EQKDIGWGSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYL 363 >gi|259506494|ref|ZP_05749396.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314] gi|259165914|gb|EEW50468.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314] Length = 387 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 164/352 (46%), Positives = 224/352 (63%), Gaps = 7/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + + R+ L + DP LW N A+ + E H+ + + E Sbjct: 31 ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 90 Query: 62 IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ RL D I+ ELA EE DD S++ E L ++ VE + +++LSGE D+ +A + Sbjct: 91 LRQRLDDLPIMYELAEEEGDDTSLVDE---ELADLRTGVEALEVKTMLSGEYDAREAVIN 147 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG Sbjct: 148 IRSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQ 207 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ RR TSF+ + V PVV+ I+I +S+ R+D YR+SG GG Sbjct: 208 LSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGG 267 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIG 299 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q +R E+ +G Sbjct: 268 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDALG 327 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D ++A + Sbjct: 328 AGGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGI 377 >gi|291528563|emb|CBK94149.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium rectale M104/1] Length = 330 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 155/323 (47%), Positives = 222/323 (68%), Gaps = 4/323 (1%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P W + +++ M+E + + + ++ +++++ D ++E+ EE+D S++ E Sbjct: 2 EAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQQ 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + + + ++LLSGE D +A L ++AGAGGTES DWA+ML RMY++WA+K+ F Sbjct: 62 MLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 TLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQH Sbjct: 182 VMPDIEEDLDIEVKDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 NK +A ML+AKLY L+ ++ +E GE EIGWG QIRSYVLQPY MVKD RT Sbjct: 242 MNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVK--EIGWGSQIRSYVLQPYTMVKDHRT 299 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 ++E + VLDG++D F+ L Sbjct: 300 DVETGNADAVLDGNIDIFINGYL 322 >gi|282905164|ref|ZP_06313021.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282331571|gb|EFB61083.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Btn1260] Length = 331 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 161/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W N +A+ ++ + L ++ K +Q + D +L EE + + ++ Sbjct: 4 EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFEGEMKEDLEQE 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK Sbjct: 64 VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERSQ Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F+++ L Sbjct: 303 EETGKVDAVMDGDIGPFIESYL 324 >gi|238923127|ref|YP_002936640.1| peptide chain release factor 2 in translation [Eubacterium rectale ATCC 33656] gi|238874799|gb|ACR74506.1| peptide chain release factor 2 in translation [Eubacterium rectale ATCC 33656] Length = 330 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 155/323 (47%), Positives = 222/323 (68%), Gaps = 4/323 (1%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P W + +++ M+E + + + ++ +++++ D ++E+ EE+D S++ E Sbjct: 2 EAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQQ 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + + + ++LLSGE D +A L ++AGAGGTES DWA+ML RMY++WA+K+ F Sbjct: 62 MLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 TLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQH Sbjct: 182 VMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 NK +A ML+AKLY L+ ++ +E GE EIGWG QIRSYVLQPY MVKD RT Sbjct: 242 MNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVK--EIGWGSQIRSYVLQPYTMVKDHRT 299 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 ++E + VLDG++D F+ L Sbjct: 300 DVETGNADAVLDGNIDIFINGYL 322 >gi|255323776|ref|ZP_05364902.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum SK141] gi|255298956|gb|EET78247.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum SK141] Length = 367 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 160/351 (45%), Positives = 222/351 (63%), Gaps = 6/351 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 11 QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQKVTSELSAAQAKVRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE D S+ D L ++ +E + ++LSGE D +A + + Sbjct: 71 LRGRLEDMPVMYELAEEEGDTSL---ADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I ++D R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL LE +++EE A + Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEEQAELDAL 305 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F+++ + Sbjct: 306 GAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGI 356 >gi|15618982|ref|NP_224772.1| peptide chain release factor 2 [Chlamydophila pneumoniae CWL029] gi|7388054|sp|P56906|RF2_CHLPN RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 369 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 160/341 (46%), Positives = 222/341 (65%), Gaps = 1/341 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD D + L L ++ + + WQ+ + A + + L I +E++ ++ Sbjct: 23 LFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEYQELKSKIDAIEFF 82 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LE A +D +I ++ + ++ + + LLSGEAD N +L ++AGAGGTES D Sbjct: 83 LEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTESCD 142 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W ML RMY+RWA K ++ E ++ DGE GIK T+ G AYG+ K E+GVHRLVR Sbjct: 143 WVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHRLVR 202 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+DSN +RHTSF+S+ V+P +DD I+IEI +D RIDT+R+SGAGGQHVN T+SAVRI Sbjct: 203 ISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESAVRI 262 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+P+GVVV CQ ERSQ +N+ ML+AKLY+ LQ+R E ++ K EI WG QI Sbjct: 263 THLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWGSQI 322 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 R+YV QPY +VKD+RT E + +LDG+ LD+F+KA LA Sbjct: 323 RNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 363 >gi|258544156|ref|ZP_05704390.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826] gi|258520598|gb|EEV89457.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826] Length = 250 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 149/245 (60%), Positives = 187/245 (76%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D N+A+L++ AG+GGTE+QDWA+MLLRMY RW E R FKTE +E G+ AGIK Sbjct: 1 MFSGELDPNNAFLDIQAGSGGTEAQDWASMLLRMYLRWGEARGFKTELIEESPGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ G AYGWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ + Sbjct: 61 SATIEFTGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFAAVFVSPEIDDNIEIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+D YRASGAGGQHVN T+SAVRITH+PT +VVQ Q RSQH+N++ LRAKLYE Sbjct: 121 DLRVDVYRASGAGGQHVNRTESAVRITHLPTNIVVQSQNSRSQHENRSTCMKQLRAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LEL KR A E SK++IGWG QIRSYVL + +KDLRT E ++ VLDG LD F Sbjct: 181 LELSKRSASAQAIEDSKSDIGWGNQIRSYVLDQSR-IKDLRTGYETSNTQAVLDGGLDPF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 LQASL 244 >gi|25027367|ref|NP_737421.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314] gi|23492648|dbj|BAC17621.1| putative translation releasing factor RF-2 [Corynebacterium efficiens YS-314] Length = 389 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 164/352 (46%), Positives = 224/352 (63%), Gaps = 7/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + + R+ L + DP LW N A+ + E H+ + + E Sbjct: 33 ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 92 Query: 62 IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ RL D I+ ELA EE DD S++ E L ++ VE + +++LSGE D+ +A + Sbjct: 93 LRQRLDDLPIMYELAEEEGDDTSLVDE---ELADLRTGVEALEVKTMLSGEYDAREAVIN 149 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG Sbjct: 150 IRSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQ 209 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ RR TSF+ + V PVV+ I+I +S+ R+D YR+SG GG Sbjct: 210 LSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGG 269 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIG 299 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q +R E+ +G Sbjct: 270 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDALG 329 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D ++A + Sbjct: 330 AGGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGI 379 >gi|256851470|ref|ZP_05556859.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN] gi|260660891|ref|ZP_05861806.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN] gi|282933470|ref|ZP_06338846.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] gi|297206285|ref|ZP_06923680.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16] gi|256616532|gb|EEU21720.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN] gi|260548613|gb|EEX24588.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN] gi|281302401|gb|EFA94627.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] gi|297149411|gb|EFH29709.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16] Length = 332 Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 155/320 (48%), Positives = 209/320 (65%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W N A+ L+ E L ++ D LEL EE D + E + Sbjct: 3 DPDFWNNQESAQKLISETNKLKEKRDHFNDLAQAFSDEETALELLKEEPDDDLQVEVETD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+++K + LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E F Sbjct: 63 LEKLKDSFHQYELNLLLSGKYDANNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHGFT 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 123 FEIDDYEPGDEAGVKSVSILIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ + Sbjct: 183 IPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQFQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK A N LRAKL++LE +K+ + + + +I WG QIRSYV PY MVKD RTN E Sbjct: 243 NKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + + V+DG LD+ + + L Sbjct: 303 TSDVNGVMDGKLDNLIYSFL 322 >gi|326561123|gb|EGE11488.1| peptide chain release factor 2 [Moraxella catarrhalis 7169] Length = 248 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 154/245 (62%), Positives = 195/245 (79%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D+N+ YL++ +G+GGTE+QDWA MLLRMY RW E FK E LE+ +G AGIK Sbjct: 1 MFSGEMDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+++KG A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ + Sbjct: 61 SATIMVKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYR+SGAGGQHVNTTDSAVRITH PTGVVV CQ ERSQH NK A MLRAKLYE Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QKR E E SK++IGWG QIRSYVL + +KDLRT +E ++ + VL+GDLD F Sbjct: 181 LEMQKRMEKQQALEESKSDIGWGSQIRSYVLDDSR-IKDLRTGVETSNTTAVLNGDLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|262049538|ref|ZP_06022408.1| peptide chain release factor 2 [Staphylococcus aureus D30] gi|259162374|gb|EEW46946.1| peptide chain release factor 2 [Staphylococcus aureus D30] Length = 330 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 162/322 (50%), Positives = 218/322 (67%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + + Sbjct: 3 EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEYLEQE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ FK Sbjct: 63 VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 123 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERSQ Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 242 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 301 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F+++ L Sbjct: 302 EETGKVDAVMDGDIGPFIESYL 323 >gi|194468150|ref|ZP_03074136.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23] gi|194453003|gb|EDX41901.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23] Length = 332 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 155/319 (48%), Positives = 210/319 (65%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ ++ E L ++D++ D +EL E D + ++ + Sbjct: 4 PDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSIELLTVEPDDDLQRDFEVSF 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + +E + LL GE D+ +A LE+H GAGGTE+QDW MLLRMY RW E+ F Sbjct: 64 TKTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHGFSV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 124 ETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DDS+E++I SD R+DT+R+SGAGGQH+N +SAVRITHIPTG+V Q ERSQ +N Sbjct: 184 PELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKIESAVRITHIPTGIVTSSQAERSQLQN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + A NML++KLYELE +K+ + E + +IGWG QIRSYV PY +VKD RT E Sbjct: 244 RVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTGYET 303 Query: 333 TSPSDVLDGDLDDFMKATL 351 + V+DGDLD F+ A L Sbjct: 304 HNGQAVMDGDLDPFIDAFL 322 >gi|311739769|ref|ZP_07713603.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium ATCC 33035] gi|311304842|gb|EFQ80911.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium ATCC 33035] Length = 367 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 160/351 (45%), Positives = 222/351 (63%), Gaps = 6/351 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 11 QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQQVTSELSAAQAKVRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE D S+ D L ++ +E + ++LSGE D +A + + Sbjct: 71 LRVRLEDMPVMYELAEEEGDTSL---ADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I ++D R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL LE +++EE A + Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEEQAELDAL 305 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F+++ + Sbjct: 306 GAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGI 356 >gi|15605186|ref|NP_219972.1| peptide chain release factor 2 [Chlamydia trachomatis D/UW-3/CX] gi|76789195|ref|YP_328281.1| peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13] gi|7388051|sp|O84465|RF2_CHLTR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|123606855|sp|Q3KLN9|RF2_CHLTA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|3328893|gb|AAC68059.1| Peptide Chain Release Factor 2 [Chlamydia trachomatis D/UW-3/CX] gi|76167725|gb|AAX50733.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13] Length = 369 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 165/345 (47%), Positives = 218/345 (63%), Gaps = 9/345 (2%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + L L + W +V+ A + L +S E+++++ Sbjct: 23 LFDPEGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVS----A 78 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128 ++ LE+++ S E L++ + E K E LLSGE D N +L ++AGAGGT Sbjct: 79 IQFFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGT 138 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ES DW MLLRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K E GVH Sbjct: 139 ESCDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVH 198 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDS Sbjct: 199 RLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDS 258 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI +K EI W Sbjct: 259 AVRITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISW 318 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 G QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 319 GSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLV 363 >gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae KM-6054] Length = 351 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 162/349 (46%), Positives = 218/349 (62%), Gaps = 2/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ + + D D ++ L + P LW +V A+ + L + ++ ++ R+ Sbjct: 1 MSSIEAVLDLDKIRADIATLEEEAAAPTLWDDVANAQKVTSRLSFLQGELRKVETLRGRV 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L ELA EDD E L ++ VE + +LLSGE D+ +A + + A AG Sbjct: 61 EDLGVLFELAEAEDDADTRTEAEAELVSVQKAVEELEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L+RMY RWAE+ + TE + EEAGIKSAT +K P AYG L EQG Sbjct: 121 GVDAADFAEQLMRMYLRWAERHGYPTEVYDTSYAEEAGIKSATFTVKSPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ S ++I E D RID YRASG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVDIDEGDLRIDVYRASGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + Sbjct: 241 DSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEERAAMDALKDGGS 298 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDGD+D F++A + +K Sbjct: 299 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPQGVLDGDIDGFIEAGIRWRK 347 >gi|302338432|ref|YP_003803638.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293] gi|301635617|gb|ADK81044.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293] Length = 339 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 160/332 (48%), Positives = 213/332 (64%), Gaps = 1/332 (0%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 Q + L ++ P W++ A+ + E + L + K++ D L ELA EE Sbjct: 2 AQEIKVLEAESGSPEFWEDRERAEKRLGELKRLHKRLDPWKDLLSSFEDLETLFELAAEE 61 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 D S + L + + GE D ++A+L +H+GAGGTE+ DW MLLR Sbjct: 62 QDESQEHDIKRQLDEVGDTYRGLNLTEMFQGEFDGSNAFLTIHSGAGGTEACDWTAMLLR 121 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MYTRWAE+R+F + L++ + E G+KS TL I G +G+LK E GVHRLVRISP+DS+ Sbjct: 122 MYTRWAERREFSVQTLDLLEAE-GGVKSVTLQINGDFVFGYLKSEIGVHRLVRISPFDSS 180 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 RRHTSF+S+++ PV+DD IE++I + RIDTYRA GAGGQHVN TDSAVRITHI TG+ Sbjct: 181 GRRHTSFASVYISPVIDDDIEVDIKPEELRIDTYRAQGAGGQHVNKTDSAVRITHISTGI 240 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VVQCQ ERSQ+KNKA A +LR++LYE +++E+ K EI WG QIRSYV QP Sbjct: 241 VVQCQNERSQYKNKAMALKILRSRLYEHYKKEQEKEQEKHAQEKKEISWGNQIRSYVFQP 300 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y MVKD RT E + V+DG++DDF+ A L Sbjct: 301 YTMVKDHRTKHEVGNIQAVMDGEIDDFIIAFL 332 >gi|108759158|ref|YP_632896.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622] gi|108463038|gb|ABF88223.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622] Length = 373 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 156/349 (44%), Positives = 229/349 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D D R++ + + P W + +A+ L++E+ L+ ++ ++ Sbjct: 12 LRERVLALRGHLDLDRKRSRIALIERDSTLPTFWDDNTKAQALLKEKSTLEASVGAYDKV 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +L ELA+E +D + QE +L ++ +V + +LSGE D + +++++ Sbjct: 72 MRGLDDAQVLFELAVEANDEATTQEAEGSLTGLEGDVAKLELARMLSGEQDRSSCFMDIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGT+S DWA MLLRMYTR+ E + +K E + GEEAG K+ +L I+G AYG+LK Sbjct: 132 AGAGGTDSMDWAAMLLRMYTRYCENKGWKVEINDEVPGEEAGFKNVSLRIEGDFAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N+RR T+F+S+ VYP VDD+I+I+I E D + R GAGGQ Sbjct: 192 AEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDTIQIDIPEKDIDLKFIRGGGAGGQK 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T S ++ H+PTG+++ CQ ERSQ NK A+ +LR +LYELE++KRE + E+ Sbjct: 252 VNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKILRGRLYELEMKKREAARDAAEAQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I +G QIRSYVL PY+MVKDLRT IE + VLDGDL++F+ + L Sbjct: 312 KKDISFGSQIRSYVLAPYRMVKDLRTGIETGNVDAVLDGDLEEFVTSQL 360 >gi|332654908|ref|ZP_08420650.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16] gi|332516251|gb|EGJ45859.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16] Length = 373 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 158/349 (45%), Positives = 228/349 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L LG D ++A + L L ++ W N+ +A+ + + + L + + Sbjct: 14 LAPTLEKLGQALDLESAERELDMLQAESAADGFWNNLEKAQKVQQRIKTLQTKVDKHHKR 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D + L E+ E +D S++ E + ++ E+E + ++LL+GE DS++ L +H Sbjct: 74 KQHWDDLMALCEMGNEFEDESLVPELEEGYAALEEEMEEARLQTLLTGEYDSSNVILTIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+QDWA ML RMYTRW E+ F + ++ DG+EAGIKSAT++I+G NAYG+L+ Sbjct: 134 PGAGGTEAQDWAQMLYRMYTRWTERHGFTYQIMDYQDGDEAGIKSATIMIEGENAYGYLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SP+D+N+RR TSF+S+ V P + + +E+EI D + YRASGAGGQH Sbjct: 194 GEHGVHRLVRVSPFDANARRQTSFASVEVMPDLPEDVEVEIRPEDIEMQVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVR+ H PTG+VV QQERSQ +NK MLRAKL EL++Q++ E + + Sbjct: 254 VNKTSSAVRLIHKPTGIVVASQQERSQFQNKDNCMKMLRAKLVELQMQEKAEKISDLKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +I WG QIRSYV PYQ+VKD RT E ++ V+DG+LD F+ A L Sbjct: 314 QLKIEWGSQIRSYVFMPYQLVKDNRTAYETSNIGAVMDGELDGFINAYL 362 >gi|153932889|ref|YP_001382578.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 19397] gi|153936079|ref|YP_001386131.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall] gi|152928933|gb|ABS34433.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 19397] gi|152931993|gb|ABS37492.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall] Length = 325 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 152/322 (47%), Positives = 220/322 (68%), Gaps = 3/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 2 QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK F Sbjct: 61 EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 AVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASIE 180 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQH Sbjct: 181 VLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQH 240 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +L++KL EL E +E+I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYL 321 >gi|216335|dbj|BAA01123.1| ORF3 [Bacillus subtilis] Length = 299 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 156/296 (52%), Positives = 202/296 (68%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 3 DPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELEKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R FK Sbjct: 63 LKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ K Sbjct: 183 MPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIK 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 N+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD R Sbjct: 243 NRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298 >gi|291523975|emb|CBK89562.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium rectale DSM 17629] Length = 330 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 155/323 (47%), Positives = 221/323 (68%), Gaps = 4/323 (1%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P W + +++ M+E + + + ++ +++++ D ++E+ EE+D S++ E Sbjct: 2 EAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQQ 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + + + ++LLSGE D +A L ++AGAGGTES DWA ML RMY++WA+K+ F Sbjct: 62 MLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWAAMLFRMYSKWADKKGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 TLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQH Sbjct: 182 VMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 NK +A ML+AKLY L+ ++ +E GE EIGWG QIRSYVLQPY MVKD RT Sbjct: 242 MNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVK--EIGWGSQIRSYVLQPYTMVKDHRT 299 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 ++E + VLDG++D F+ L Sbjct: 300 DVETGNADAVLDGNIDIFINGYL 322 >gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078 str. F0262] gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078 str. F0262] Length = 378 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 162/346 (46%), Positives = 225/346 (65%), Gaps = 2/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L LG D +N +R+ L+ E+P W + A L E HL N + + ++ Sbjct: 18 LEHLGASLDLENKRKRILELDRMMEEPDFWTDPERANRLSTENHHLKNELESYQSLKQSY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L+E+ +EE D S++ E + L +++ + LLSGE D+ +A L ++AGAG Sbjct: 78 DDIGALIEMGVEEGDESVIPEIRELLSEFSEKLDSMSTQLLLSGEYDAMNAILRLNAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DWA ML RMYTRWAE+R F + L+ +GEEAGIKS T+ I G AYG+L+ E G Sbjct: 138 GTEANDWAGMLYRMYTRWAERRGFGIKILDYLEGEEAGIKSVTMEIDGDYAYGYLRSESG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+++ +R TSF S V P ++ I+++I E D +++ +R+SGAGGQH+N T Sbjct: 198 IHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDVDIREEDIKMEVFRSSGAGGQHINKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTE 305 SAVR+ HIPTG VV CQ+ERSQ +N+ +A ML+AKLY E +++E ++A I K Sbjct: 258 SSAVRLIHIPTGFVVACQEERSQLQNRQKAMQMLKAKLYIKEKEEQEAKLAGIRGEVKDN 317 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVLQPY+MVKDLRT E + VLDGD+D F+ A L Sbjct: 318 -GWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRFITAYL 362 >gi|315452804|ref|YP_004073074.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179] gi|315131856|emb|CBY82484.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179] Length = 363 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 161/332 (48%), Positives = 224/332 (67%), Gaps = 3/332 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L+ L + DP WQ+ A +E+ ++ +S + ++ L + L EL ++ DD Sbjct: 33 LTALEREQSDPLFWQDKERAASKNQEKVKIERLLSAYQNAKNTLVEARELFEL-VQNDDP 91 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S L + ++ ++ V+ + +L+ D DA + + G GG ESQDW +ML RMY Sbjct: 92 STLAQLFEDAPHLQACVQSLEVGVMLANAHDGRDAIVSIQPGVGGVESQDWGSMLYRMYL 151 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAE++ FK E L+ +GEEAGIK +I+G N YG++K E GVHRLVR+SP+++N +R Sbjct: 152 RWAERKGFKVELLDYQEGEEAGIKGVAFIIRGINVYGYMKNENGVHRLVRMSPFNANGKR 211 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P VDD I+I I + D RIDTYRASGAGGQHVN T+SA+RITH+ TG+VVQ Sbjct: 212 HTSFASVQVSPEVDDDIDIVIEDKDIRIDTYRASGAGGQHVNKTESAIRITHLATGIVVQ 271 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ +RSQHKNKA A ML+++LYELEL +++E ++ E K+EIGWG QIRSYVL PYQ Sbjct: 272 CQNDRSQHKNKAMALKMLKSRLYELELHRQKEQSSAEE--KSEIGWGHQIRSYVLAPYQQ 329 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KD R+ I ++ +LDGDLD M+A L K Sbjct: 330 IKDARSEIAYSNVEAILDGDLDAMMEAVLVSK 361 >gi|323441389|gb|EGA99047.1| peptide chain release factor 2 [Staphylococcus aureus O46] Length = 331 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 161/322 (50%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 4 EPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQE 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ F+ Sbjct: 64 VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFE 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERSQ Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F+++ L Sbjct: 303 EETGKVDAVMDGDIGPFIESYL 324 >gi|124007003|ref|ZP_01691832.1| peptide chain release factor 2 [Microscilla marina ATCC 23134] gi|123987456|gb|EAY27176.1| peptide chain release factor 2 [Microscilla marina ATCC 23134] Length = 324 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 157/322 (48%), Positives = 218/322 (67%), Gaps = 2/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 T P W + A+ +++E + + ++Q+ L D L +L LE + S E + Sbjct: 2 THQPEFWDDPKAAEKVLKEIKSIKIWTERFDKVQN-LWDELEILNEFLEAGEGS-ETEVT 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++ ++ +F+ +LS E D +A +E++ GAGGTES DWA ML+RMY W EK Sbjct: 60 NLFSKLEKALDELEFQKMLSDEEDPLNALIEINPGAGGTESMDWAGMLMRMYIMWGEKNN 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K + GE AG+KS TL I+G AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 120 YKVREVNYQAGEAAGVKSVTLEIEGDFAYGHLKAEIGVHRLVRISPFDSGGRRHTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + YPVVDD+IEIEIS +D DT+RA GAGGQ+VN ++AVR+ H P+G++V+CQQERSQ Sbjct: 180 FAYPVVDDTIEIEISPADIEWDTFRAGGAGGQNVNKVETAVRLKHKPSGIIVECQQERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A MLR++LY++E++K+ E E SK I +G QIRSYVL PY+MVKDLRT Sbjct: 240 LQNKDKAMKMLRSRLYQVEMEKKNEARAKVEGSKKRIDFGSQIRSYVLHPYKMVKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E++ +VLDGDL D+MKA L Sbjct: 300 HERSDVQNVLDGDLSDYMKAFL 321 >gi|225868809|ref|YP_002744757.1| peptide chain release factor 2 [Streptococcus equi subsp. zooepidemicus] gi|225702085|emb|CAW99717.1| peptide chain release factor 2 [Streptococcus equi subsp. zooepidemicus] Length = 338 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 156/329 (47%), Positives = 215/329 (65%), Gaps = 2/329 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L K +P W + + A+ +E L +Q+ + + LE+ L+EDD Sbjct: 5 IALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHNMQELSDETELYLEM-LDEDD- 62 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S+ +E +L R+ + + LLS D ++A LE+H G+GGTE+QDWA+ML RMYT Sbjct: 63 SVKEELEASLTRLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLFRMYT 122 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ + FK E L+ G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS RR Sbjct: 123 RFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV Sbjct: 183 HTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 +R+Q+ N+ +A ML+AKLY+LE +K+ E N + K EI WG QIRSYV PY M Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RTN E V+DGD++ F+ A L Sbjct: 303 VKDHRTNFEVAQVDKVMDGDIEGFIDAYL 331 >gi|290954114|ref|ZP_06558735.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica URFT1] gi|295312499|ref|ZP_06803267.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica URFT1] Length = 241 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 145/238 (60%), Positives = 184/238 (77%), Gaps = 1/238 (0%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 +N A+L++ +G+GGTE+QDWA ML+RMY RWA+ FK ++ DG+ AGIK TL I+ Sbjct: 1 ANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKIE 60 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTY Sbjct: 61 GEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTY 120 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+ A L++KLYE+ELQKR Sbjct: 121 RASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYEMELQKRN 180 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 N E SK +IGWG QIRSYVL + +KDLRT +E T+ VLDGDLD F++A+L Sbjct: 181 AEKNALEDSKADIGWGSQIRSYVLDQSR-IKDLRTGVENTNTQAVLDGDLDKFIEASL 237 >gi|238854884|ref|ZP_04645214.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3] gi|260664171|ref|ZP_05865024.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US] gi|282931596|ref|ZP_06337089.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] gi|313472385|ref|ZP_07812877.1| peptide chain release factor 2 [Lactobacillus jensenii 1153] gi|238832674|gb|EEQ24981.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3] gi|239529755|gb|EEQ68756.1| peptide chain release factor 2 [Lactobacillus jensenii 1153] gi|260562057|gb|EEX28026.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US] gi|281304207|gb|EFA96316.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] Length = 332 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 154/320 (48%), Positives = 207/320 (64%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W N A+ L+ L ++ D LEL EE D + E + Sbjct: 3 DPDFWNNQESAQKLISATNKLKEKRDHFNDLAQAFSDEEAALELLKEESDTDLQAEVESD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ +K + LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E F Sbjct: 63 LESLKDSFHQYELNLLLSGKYDTNNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHGFT 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 123 FEIDDYEPGDEAGVKSVSVLIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ + Sbjct: 183 IPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQFQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK A N LRAKL++LE +K+ + + + +I WG QIRSYV PY MVKD RTN E Sbjct: 243 NKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + + V+DG LD+ + + L Sbjct: 303 TSDVNGVMDGKLDNLIYSFL 322 >gi|330465934|ref|YP_004403677.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032] gi|328808905|gb|AEB43077.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032] Length = 373 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 162/354 (45%), Positives = 222/354 (62%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D + L + P LW + A+ + + +++ I + + Sbjct: 13 LDATLRNIEAVLDLDRLRADKARLEQEASAPDLWDDQARAQQVTSQLSYVNGEIEKLGSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLELA E D +L E + + ++ + +LLSGE DS +A + + Sbjct: 73 RSRIDDANVLLELAEAEADSGVLSEVESEITGLAKAIQEMEVRTLLSGEYDSREALVAIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E++ RID YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDSIDIPENEMRIDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GES 301 VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A +L+A+L LE +++EE A + G Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKMAGLK 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +PS V DGDLD F++A + +K Sbjct: 311 TDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGDLDSFIEAGIRWRK 364 >gi|15896100|ref|NP_349449.1| peptide chain release factor 2 [Clostridium acetobutylicum ATCC 824] gi|15025890|gb|AAK80789.1|AE007782_3 Protein chain release factor B [Clostridium acetobutylicum ATCC 824] gi|325510254|gb|ADZ21890.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018] Length = 329 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 158/322 (49%), Positives = 220/322 (68%), Gaps = 10/322 (3%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA----LEEDDCSILQ 86 ++P W +V A+ + E + L I I+ R+ D+ +L+E+ EE+ IL+ Sbjct: 2 QEPDFWNDVKRAQEISMEIKFLKGRIDRFNSIESRIEDDNVLIEMCREDENEEEADEILK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E D + EV+ + E +LSGE D N+A L +H G GGT++QDW MLLRMYTRWAE Sbjct: 62 EVRD----LHEEVDNFKIEIILSGEYDRNNAILNLHTGVGGTDAQDWTQMLLRMYTRWAE 117 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK + +++ G+EAGIKS ++ I G AYG+LK E+G+HRLVRISP+++N +R TSF Sbjct: 118 AKGFKVDIIDMLPGDEAGIKSVSINIDGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSF 177 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P + S +I I D ++DTYRASGAGGQHVN T+SAVRITH+PTG+VVQCQ E Sbjct: 178 ASVEVLPQLTQSQDIVIRPEDLKVDTYRASGAGGQHVNKTESAVRITHLPTGIVVQCQSE 237 Query: 267 RSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 RSQH NK A NML++KL EL E +E++ ++ K ++GWG QIRSYV QPY MVKD Sbjct: 238 RSQHSNKETAMNMLKSKLVELKERMHKEKVEDLAGELK-DMGWGNQIRSYVFQPYTMVKD 296 Query: 326 LRTNIEKTSPSDVLDGDLDDFM 347 RT +E ++ V+DG++D F+ Sbjct: 297 HRTGVETSNVDAVMDGEIDKFI 318 >gi|168177506|ref|ZP_02612170.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916] gi|182671219|gb|EDT83193.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916] Length = 325 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 152/322 (47%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 2 QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK F Sbjct: 61 EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 AVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASIE 180 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQH Sbjct: 181 VLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQH 240 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +L++KL EL E +E I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 241 TNKETAMKVLKSKLVELKERSHKERIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYL 321 >gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM 20162] gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM 20162] Length = 371 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 166/353 (47%), Positives = 223/353 (63%), Gaps = 6/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D +R+ L K DP LW + A+ + + H + + + ++ Sbjct: 12 LETTLQTVEKVIDLDELRRRVDELEHKASDPELWNDQANAQQVTSQLSHAQSELRRVTDL 71 Query: 63 QDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKL--EVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE D + R KL E+E + +++LSGE D+ DA + Sbjct: 72 RQRLDDLPVLYELAEAEEGDDLAAALEDADADRAKLRGEIEAMEVKTMLSGEYDARDALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + AGAGG ++ DWA ML+RMY RWAEK + E + EEAG+KSAT IK AYG Sbjct: 132 NIRAGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGLKSATFAIKTDYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L E G HRLVRISP+D+ RR TSF+ + V PVV+ + I++ E++ R+D YR+SG G Sbjct: 192 TLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVDENEVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE +++EE A + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKL--LERKRQEERAQMD 309 Query: 300 ESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 TE WG Q+RSYVL PYQMVKDLRTN E +PS VLDGDLD F++A + Sbjct: 310 ALKTTEGASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLDGDLDGFIEAGI 362 >gi|159036572|ref|YP_001535825.1| peptide chain release factor 2 [Salinispora arenicola CNS-205] gi|189040003|sp|A8M3R1|RF2_SALAI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157915407|gb|ABV96834.1| peptide chain release factor 2 [Salinispora arenicola CNS-205] Length = 373 Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 157/324 (48%), Positives = 215/324 (66%), Gaps = 3/324 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P LW + A+ + + +++ I+ + +++ RL D +LLELA E D +L E + + Sbjct: 43 PDLWDDQARAQQVTSQLSYVNGEITKLTDLRSRLDDTQVLLELAEAESDPGVLTEVAAEI 102 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + ++ + +LLSGE DS +A + + AGAGG ++ D+A MLLRMY RWAE+ + T Sbjct: 103 TGLAKSIDEMEVRTLLSGEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPT 162 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E E EEAG+KSAT +K P AYG L E G HRLVRISP+D+ RR TSF+ + V Sbjct: 163 EVYETSYAEEAGLKSATFTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVL 222 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 PVV+ + I+I E++ R D YR+SG GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ +N Sbjct: 223 PVVEQTDHIDIPENEMRTDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQN 282 Query: 273 KAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 KA A +L+A+L LE +++EE A + G + WG Q+RSYVL PYQMVKDLRT E Sbjct: 283 KASALRVLQARL--LERKRQEEQAKLQGLKTDAAGSWGDQMRSYVLHPYQMVKDLRTEQE 340 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 SPS V DG+LD F++A + +K Sbjct: 341 TGSPSSVFDGELDAFIEAGIRWRK 364 >gi|224475896|ref|YP_002633502.1| peptide chain release factor RF-2, major part [Staphylococcus carnosus subsp. carnosus TM300] gi|222420503|emb|CAL27317.1| peptide chain release factor RF-2, major part [Staphylococcus carnosus subsp. carnosus TM300] Length = 333 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 159/322 (49%), Positives = 224/322 (69%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP+ W + +A+ ++ + L + ++ ++++ L D EL EE D + + + Sbjct: 4 DPNFWDDQNKAQEIIDKNNALKHVVNGYRDLEAELEDMSATHELLAEEFDEDLKADLEEE 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 K +++ + + LL+G D+N+A LE+H GAGGTESQDWA+MLLRMY R+AE++ FK Sbjct: 64 ANAFKDKLDQFELQLLLNGPYDANNAILELHPGAGGTESQDWASMLLRMYQRYAEQQGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 124 VEFADYLPGDEAGVKSVTLVIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P ++ IEIE++ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 184 IPEFSNNEIEIEVNPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++E E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + + V+DG++ F++A L Sbjct: 303 EETGNVNAVMDGEIGPFIEAYL 324 >gi|153938890|ref|YP_001389537.1| peptide chain release factor 2 [Clostridium botulinum F str. Langeland] gi|152934786|gb|ABS40284.1| peptide chain release factor 2 [Clostridium botulinum F str. Langeland] gi|295317635|gb|ADF98012.1| peptide chain release factor 2 [Clostridium botulinum F str. 230613] Length = 325 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 151/322 (46%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 2 QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK F Sbjct: 61 EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEGF 120 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 AVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASIE 180 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQH Sbjct: 181 ILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQH 240 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +L++KL EL E +E I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 241 TNKETAMKVLKSKLVELKERSHKERIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYL 321 >gi|315445399|ref|YP_004078278.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. Spyr1] gi|315263702|gb|ADU00444.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. Spyr1] Length = 372 Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 162/354 (45%), Positives = 223/354 (62%), Gaps = 8/354 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + + H N + ++E+ Sbjct: 12 LDTTLTTVERVVDVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE+ E L +++ ++ + +LLSGE D +A + Sbjct: 72 RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LERKRLEERAEM- 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 362 >gi|171780065|ref|ZP_02920969.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281413|gb|EDT46848.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 336 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 155/329 (47%), Positives = 214/329 (65%), Gaps = 2/329 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L K +P W + I A+ +E L E+Q+ + + LE+ L+EDD Sbjct: 5 IALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEM-LDEDD- 62 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 SI E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYT Sbjct: 63 SIQAELEETLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYT 122 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RR Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRR 182 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSFSS+ V P +DD++E+EI + D ++DT+R+ GAGGQ+VN + +R+THIPTG+VV Sbjct: 183 HTSFSSVEVMPELDDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGIRLTHIPTGIVVA 242 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY M Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTM 302 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RT E V+DGD+D F+ A L Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIDGFIDAFL 331 >gi|169347339|ref|ZP_02866277.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552] gi|169293956|gb|EDS76089.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552] Length = 367 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 150/259 (57%), Positives = 191/259 (73%), Gaps = 2/259 (0%) Query: 95 IKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +K + + +FE LLSGE D+ +A +E+H GAGGTESQDWA ML RMY R+A ++ +K Sbjct: 103 LKFQEDLDKFEKMMLLSGEHDNLNAIVEIHPGAGGTESQDWAEMLFRMYQRYASRKDWKV 162 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ DG+ AGIKS T+LIKG + YG LK E+GVHRLVR+SP+DS RRHTSF+S+ V Sbjct: 163 EVLDYLDGDVAGIKSVTMLIKGEDVYGHLKAEKGVHRLVRLSPFDSAKRRHTSFASVDVM 222 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P ++ IEI+I D +IDTYRASGAGGQH+N TDSAVRITHIPT +VV CQ +RSQ KN Sbjct: 223 PEFNNEIEIDIKNEDLKIDTYRASGAGGQHINKTDSAVRITHIPTNIVVTCQSQRSQIKN 282 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + QA ML++KLY+L L+K+ + + EI WG QIRSYVL PY +VKD R+N E Sbjct: 283 REQAMIMLKSKLYQLMLEKQASELKELKGEQKEIAWGSQIRSYVLHPYSLVKDNRSNYES 342 Query: 333 TSPSDVLDGDLDDFMKATL 351 ++P VLDGDLD F+ A L Sbjct: 343 SNPKAVLDGDLDGFIYAYL 361 >gi|118090032|ref|YP_873927.1| peptide chain release factor 2 [Streptococcus pneumoniae TIGR4] gi|123517990|sp|Q2MGI2|RF2_STRPN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|85720582|gb|ABC75805.1| peptide chain release factor 2, programmed frameshift [Streptococcus pneumoniae TIGR4] Length = 364 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 158/346 (45%), Positives = 216/346 (62%), Gaps = 2/346 (0%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +L G D + + ++ L K +P W + I A+ +E L N + ++++ Sbjct: 16 KLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEEL 75 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + ILL+ E D S+ E L + + + LLS D N+A LE+H G+ Sbjct: 76 QDEVEILLDFLAE--DESVHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGS 133 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDW +MLLRMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG LK E Sbjct: 134 GGTEAQDWGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEM 193 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DS RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN Sbjct: 194 GVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNK 253 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 + VR+THIPTG+VVQ +R+Q+ N+ +A ML+AKLY++E K+ + + K E Sbjct: 254 VSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKE 313 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIRSYV PY MVKD RT+ E V+DGDLD F+ A L Sbjct: 314 ITWGSQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFIDAYL 359 >gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL B-59395] gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL B-59395] Length = 370 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 160/353 (45%), Positives = 223/353 (63%), Gaps = 6/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R+ L + DP LW + A+ + E H + + E+ Sbjct: 12 LDATLTTVEKVMDLEELRRRIDELEMQASDPDLWNDQDHAQKVTSELSHAQAELRRVTEL 71 Query: 63 QDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKL--EVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE D + + +R L ++E + +++L+GE D +A + Sbjct: 72 RSRLDDLPVLYELAEAEEGDAGVSATEDADTERADLRRDIEAMEVKTMLAGEYDPREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ E + EEAG+KSAT +K P YG Sbjct: 132 NIRSGAGGVDAADWAQMLMRMYIRWAEQHGHSVEVYDTSYAEEAGLKSATFAVKAPYMYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A +L+AKL LE +++EE A + Sbjct: 252 GQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LERKRQEERAQMD 309 Query: 300 E-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 S T WG Q+RSYVL PYQMVKDLRTN+E +PS VLDG+LD F++A + Sbjct: 310 ALKSDTGASWGNQMRSYVLHPYQMVKDLRTNVESNNPSAVLDGELDQFIEAGI 362 >gi|332994017|gb|AEF04072.1| protein chain release factor B, RF-2 [Alteromonas sp. SN2] Length = 248 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 157/245 (64%), Positives = 188/245 (76%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D+ND Y+++ +G+GGTE+QDWANMLLRMY RW E FKTE +E+ DG+ AGIK Sbjct: 1 MFSQPNDANDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SATL I G A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP VDD I+I+I S Sbjct: 61 SATLRIAGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEVDDDIDIDIDPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E SK++IGWG QIRSYVL + +KDLRT +E + VLDG LD F Sbjct: 181 YELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGGLDKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|328948955|ref|YP_004366292.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489] gi|328449279|gb|AEB14995.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489] Length = 381 Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 162/353 (45%), Positives = 226/353 (64%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + G D D+ ++++ T P W + +A +M + + L I ++ Sbjct: 15 QLKADVSAVWGRLDVDDINKKIAEKEALTTAPGFWDDNAKATKIMNDIKLLKGRIEPWQD 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D L EL LEE+D SI E + ++ K + E++ +LLS E D ND +L V Sbjct: 75 LVQRVDDLEALYELGLEENDKSIESELKEQYEKAKADYEHQSILNLLSDEVDKNDCFLSV 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+ DW ML RMY RWAE+ +K E L + E G+KS + I GP YG+ Sbjct: 135 HAGAGGTEACDWTFMLSRMYQRWAERHGYKVEVLSQEEAE-GGLKSINMKISGPYVYGYT 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D+N+RRHTSF+S++V+PV+DDSIE+ I D R+DTYR+ G GGQ Sbjct: 194 KGEAGVHRLVRISPFDANARRHTSFASVYVFPVLDDSIEVNIDPKDLRVDTYRSGGKGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR THIPTG+VV C ERSQ N+A A ++L+++LYE ++RE+ + Sbjct: 254 HVNKTESAVRFTHIPTGIVVACDSERSQLMNRASAMSILKSRLYEYYKEEREKENSKFAG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I +G QIRSYV QPY MVKD RT + V+DGD+D F+ L+ K Sbjct: 314 EKKDISFGSQIRSYVFQPYTMVKDHRTKYSVGNIQGVMDGDIDGFLDEFLSAK 366 >gi|89897615|ref|YP_521102.1| hypothetical protein DSY4869 [Desulfitobacterium hafniense Y51] gi|89337063|dbj|BAE86658.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 315 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 156/309 (50%), Positives = 215/309 (69%), Gaps = 3/309 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +M+E + + +Q +L D L L ++A+EE D S+ E + + ++ ++ + Sbjct: 1 MMQELSYQQEKVKTYYTLQQQLDDLLTLYQMAVEEKDESLEPELEEGILALQQRLDGLEL 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 E LLSG D N+A + +HAGAGGTE+QDW +ML RMY R+ E+ +K E ++ G+EAG Sbjct: 61 EILLSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEI 223 IKSATL G NA+G+LK E+GVHRLVRISP+D++ RRHTSF+S+ V P V++D+ EI+I Sbjct: 121 IKSATLSFAGENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQI 180 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 D ++DTYRASGAGGQHVN T SAVRITH+PTG+VVQ Q ERSQ +N+A +L+AK Sbjct: 181 PPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAK 240 Query: 284 LYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 L EL+ +++E EI+ I + EI WG QIRSYV PY MVKD RTN E + V+DG+ Sbjct: 241 LLELKRKQQEDEISEI-RGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGE 299 Query: 343 LDDFMKATL 351 +D F+ A L Sbjct: 300 IDQFIAAYL 308 >gi|282856730|ref|ZP_06265994.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455] gi|282585426|gb|EFB90730.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455] Length = 252 Score = 309 bits (791), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 151/245 (61%), Positives = 183/245 (74%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 LLSG D A L VHAG+GG +SQDWA ML RMY RW E+R+FKT+ L+ EEAGIK Sbjct: 4 LLSGPYDHCSAILSVHAGSGGLDSQDWAEMLYRMYLRWCEERRFKTKLLDYQHDEEAGIK 63 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SATLLI+G AYG+L+ E GVHRLVRISP+D+N RRHTSF+S+ V P + D +++EI+ Sbjct: 64 SATLLIQGETAYGYLRSEIGVHRLVRISPFDTNKRRHTSFASVDVSPQLPDDVDVEIAPE 123 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYR+SGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH NKA A ++L++KLY+ Sbjct: 124 DLRIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVVSCQNERSQHMNKATAMSVLKSKLYQ 183 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL++R+ N K E WG QIRSYVLQPY +VKD RT E + VLDG LD F Sbjct: 184 RELEQRQAEMNALAGEKKESTWGSQIRSYVLQPYTLVKDHRTGEETGNVGGVLDGGLDPF 243 Query: 347 MKATL 351 + A L Sbjct: 244 ILAYL 248 >gi|269792424|ref|YP_003317328.1| peptide chain release factor 2 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100059|gb|ACZ19046.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermanaerovibrio acidaminovorans DSM 6589] Length = 374 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 161/314 (51%), Positives = 212/314 (67%), Gaps = 4/314 (1%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 A+ L + +Q ++ + +E++D + L L A E++D S +E D ++ +E Sbjct: 55 ARELSQLQQRRESFSALEREMED--LETLAELLQAGEDEDLS--REFYDRAAEMERRLER 110 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 Q +LL E D +DA + +HAGAGG +SQDWA ML RMY RWAE+ FK L+ + Sbjct: 111 TQVLTLLDEEYDRSDAIVGIHAGAGGLDSQDWAEMLYRMYVRWAERNGFKVRVLDELPDQ 170 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 EAGIKS T + G AYG+LKGE+GVHRLVRISP+D+ RRHTSF+S+ V PV+ D +EI Sbjct: 171 EAGIKSVTFQVSGEYAYGYLKGERGVHRLVRISPFDAAKRRHTSFASVEVMPVLPDDVEI 230 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI D ++DT+RASGAGGQ+VN TDSAVRITHIPTG+VV CQ ERSQH N+A A ML+ Sbjct: 231 EIRPEDIKMDTFRASGAGGQYVNMTDSAVRITHIPTGIVVSCQVERSQHMNRATALQMLK 290 Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +KL+E +L++R+E + K I WG QIRSY LQP+Q+VKD R+ E + VLDG Sbjct: 291 SKLFERQLRERQEQLEAIQGEKRAISWGSQIRSYTLQPFQLVKDHRSGCEIGNVQAVLDG 350 Query: 342 DLDDFMKATLAIKK 355 DLDD M A L K Sbjct: 351 DLDDLMMAYLKFYK 364 >gi|325287611|ref|YP_004263401.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489] gi|324323065|gb|ADY30530.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489] Length = 365 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 160/350 (45%), Positives = 229/350 (65%), Gaps = 5/350 (1%) Query: 7 LNCLGGL---FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L+ LG L D D + + KT P W N A+ M+ Q + + + Sbjct: 11 LDRLGALRRYLDIDAKLIEIENEEEKTLAPDFWNNAQVAQAQMKVLQSKKKWVKDFDDAK 70 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +LLE L+E D + +E ++ + K +E +F+++LS E D A L++ A Sbjct: 71 ILIADLEVLLEF-LKEGDVTA-EEVENHYNKAKTHIEDLEFKNMLSDEGDELTAILQITA 128 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA ML+RMY WAEK +K + L +G+ AGIK+ TL I+G A+GWLKG Sbjct: 129 GAGGTESCDWAAMLMRMYLMWAEKNGYKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLKG 188 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEIEI+ +D I T R+SGAGGQ+V Sbjct: 189 ENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIEINPADIEITTARSSGAGGQNV 248 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N ++ V++TH PTG+ + C RSQH N+A A ML+++LYE+EL+K++E + E+ K Sbjct: 249 NKVETKVQLTHKPTGIQISCSDSRSQHDNRATAMKMLKSQLYEIELRKKQEARSEIEAGK 308 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +I WG QIR+YV+ PY++VKD+RT E + V+DG +D F+KA L + Sbjct: 309 MKIEWGSQIRNYVMHPYKLVKDVRTAEETGNVDAVMDGQIDPFLKAYLMM 358 >gi|288905693|ref|YP_003430915.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34] gi|306831789|ref|ZP_07464945.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978722|ref|YP_004288438.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732419|emb|CBI13991.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34] gi|304425987|gb|EFM29103.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178650|emb|CBZ48694.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 336 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 155/329 (47%), Positives = 215/329 (65%), Gaps = 2/329 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L K +P W + I A+ +E L E+Q+ + + LE+ L+EDD Sbjct: 5 IALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEM-LDEDD- 62 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S+ E ++L+++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYT Sbjct: 63 SVQAELEESLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYT 122 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RR Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRR 182 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSFSS+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV Sbjct: 183 HTSFSSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY M Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTM 302 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RT E V+DGD+D F+ A L Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIDGFIDAYL 331 >gi|317121051|ref|YP_004101054.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter marianensis DSM 12885] gi|315591031|gb|ADU50327.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter marianensis DSM 12885] Length = 416 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 158/321 (49%), Positives = 210/321 (65%), Gaps = 2/321 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W A+ +R+ + L + + ++ +L D +L ELA EE D S++ E + Sbjct: 41 DPSFWDEPDRAQQQVRQLKVLKGPVEHYEALERQLDDLQVLAELAAEEADVSVIPELEEG 100 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + + + + + LL+G D DA + +H GAGGTESQDWA ML RMYTRWAE ++ Sbjct: 101 IAKAEEGLRQLELDLLLNGPYDGYDAIVSLHPGAGGTESQDWAQMLWRMYTRWAEDHGYQ 160 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L++ +GEEAGIKS T ++GPNAYG+L+ E GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 161 VEVLDLLEGEEAGIKSVTFAVRGPNAYGYLRSEHGVHRLVRISPFDAAGRRHTSFASVDV 220 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + DS EIEI D RID +RA G GGQHVN T+SAVRI H+PTG+V CQ ERSQH Sbjct: 221 LPDLGDSPEIEIRPEDLRIDVFRAGGHGGQHVNKTESAVRIVHLPTGIVATCQNERSQHA 280 Query: 272 NKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ A +L+A+L E Q+ +EIA + EI WG QIRSYV QPY +VKD RT + Sbjct: 281 NRETAMKILKARLARYYEEQRLKEIAAL-RGDVGEIAWGNQIRSYVFQPYTLVKDHRTGV 339 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DG LD F+ A L Sbjct: 340 EVGNVQAVMDGHLDPFINAYL 360 >gi|300857995|ref|YP_003782978.1| peptide chain release factor RF-2 [Corynebacterium pseudotuberculosis FRC41] gi|300685449|gb|ADK28371.1| peptide chain release factor RF-2 [Corynebacterium pseudotuberculosis FRC41] gi|302205723|gb|ADL10065.1| Peptide chain release factor 2 (RF-2) [Corynebacterium pseudotuberculosis C231] gi|302330275|gb|ADL20469.1| Peptide chain release factor 2 (RF-2) [Corynebacterium pseudotuberculosis 1002] gi|308275958|gb|ADO25857.1| Peptide chain release factor 2 (RF-2) [Corynebacterium pseudotuberculosis I19] Length = 366 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 161/351 (45%), Positives = 222/351 (63%), Gaps = 5/351 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW N A+ + E + + + Sbjct: 11 ELDATLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ ELA EE D + L + + L + E+E + +++LSGE D+ +A + + Sbjct: 71 LRQRIDDMPVMYELAEEEGDDTELAD--EELAELTSEIESLEVKTMLSGEYDAREAVINI 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 129 RSGAGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ I V PVV+ + I+I +S+ R+D YR+SG GGQ Sbjct: 189 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q +R E+ +G Sbjct: 249 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAELDALGA 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E P VLDGDLD F++A + Sbjct: 309 GGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGI 357 >gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827] gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827] Length = 367 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 161/353 (45%), Positives = 222/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L + + D D +++ L + P LW + +A+ + + H + + + Sbjct: 12 LSATLASIEAVMDLDALRAQVAELEEQAARPDLWDDQEKAQRVTSQLSHKQGELRRVTAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA +E D E +++ E+ + +LLSGE D+ DA + V Sbjct: 72 RGRLDDLGVLYELAEDEGDEGSAAEADTERAKLREEISSLEVRTLLSGEYDARDALVTVR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A MLLRMY+RWAE+ + + + EEAGIKSAT + P AYG L Sbjct: 132 AEAGGVDAADFAEMLLRMYSRWAERHNYAVDVFDTSYAEEAGIKSATFRVTAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + +EI E + R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQTDHVEIDEKELRVDVYRSSGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A +L+AKL LE Q++EE A + Sbjct: 252 VNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQAKL--LERQRQEEQAKMDALK 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +PS VLDG++DDF++A + +K Sbjct: 310 DSGSSWGNQMRSYVLHPYQMVKDLRTEHEVGNPSAVLDGEIDDFLEAGIRWRK 362 >gi|256820726|ref|YP_003142005.1| peptide chain release factor 2 [Capnocytophaga ochracea DSM 7271] gi|256582309|gb|ACU93444.1| bacterial peptide chain release factor 2 (bRF- 2) [Capnocytophaga ochracea DSM 7271] Length = 367 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 154/351 (43%), Positives = 233/351 (66%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L FD D +S KT P W N EA+ +MRE + + +E Sbjct: 10 LVNRLGALRRYFDVDAKRIEISNEEEKTFAPDFWDNAKEAEKVMRELRTKKKWVEDYEEA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D +LL+ E + + ++ + +E +F ++LS E D+ A L++ Sbjct: 70 ENLTSDIEVLLDFFKEGEATA--EDVDHQYTQALHAIEALEFRNMLSDEGDTMSAVLQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+MLLRMYT W +K+K + L +G+ AG+K+ T+ I+G A+G+LK Sbjct: 128 AGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGVKTVTIEIEGEYAFGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ +D +T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPADITFETMRSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H PTG++++ + RSQ NK +A +L+++LYE+EL+KR+ + E+ Sbjct: 248 VNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIR+YV+ PY++VKD+RTN E T V++G+LD+F+KA L + Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDEFLKAYLML 358 >gi|120610527|ref|YP_970205.1| peptide chain release factor 2 [Acidovorax citrulli AAC00-1] gi|120588991|gb|ABM32431.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax citrulli AAC00-1] Length = 300 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 152/286 (53%), Positives = 205/286 (71%), Gaps = 1/286 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L DN L E++ EE D + L +++ +E +F + S EAD + ++++ AGA Sbjct: 12 LADNAELYEMSKEEGDEAGLLTIEAEAGKLRPLIEELEFRRMFSNEADPLNCFVDIQAGA 71 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+ DWA MLLR Y ++AE++ FK + G+ AGIKSAT+ I+G AYG L+ E Sbjct: 72 GGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGEYAYGLLRTET 131 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS+ RHTSF+S++VYP +DDSIEI I+ +D R DT+RASGAGGQH+N Sbjct: 132 GVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRASGAGGQHINK 191 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E E +KT+ Sbjct: 192 TDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDTKTD 251 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 252 VGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 296 >gi|332798808|ref|YP_004460307.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1] gi|332696543|gb|AEE91000.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1] Length = 365 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 158/326 (48%), Positives = 221/326 (67%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L KT W + A+ ++ L ++ + D L L+EL E DD + Sbjct: 35 LEQKTFAADFWNDQELAQKTLQRLNDLKEKFDNFTLLEKKYDDLLTLIELCTETDDEELR 94 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + ++ K ++E + ++LLSG+ D +A L +HAGAGGTE+QDW +MLLRMYTRWA Sbjct: 95 TELLNEMKDFKKQLEKMKLQTLLSGKYDGRNAILTLHAGAGGTEAQDWVSMLLRMYTRWA 154 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + +K L++ G+EAGIKSA +L++GPNAYG+LK E+GVHRLVRISP+D+ RRHTS Sbjct: 155 EDKGYKVSILDMLPGDEAGIKSAAVLVEGPNAYGYLKSEKGVHRLVRISPFDAAGRRHTS 214 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD IEI+I D +IDT+R+ GAGGQHVN T+SAVRITHIPTG VV CQ Sbjct: 215 FASVDVMPEIDDDIEIDIKPEDLKIDTFRSGGAGGQHVNKTESAVRITHIPTGTVVSCQN 274 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ N+ A +LRAKL+++ +++++ + S+ EI WG QIRSY+ PY +VKD Sbjct: 275 ERSQQSNRNTAMKILRAKLFDIYQEEQQKELDKIRGSQKEIAWGSQIRSYIFHPYSLVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT++E + V+DG+LD+F+ A L Sbjct: 335 HRTDVEVGNVQAVMDGELDEFINAYL 360 >gi|19552028|ref|NP_600030.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC 13032] gi|62389691|ref|YP_225093.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC 13032] gi|145294961|ref|YP_001137782.1| peptide chain release factor 2 [Corynebacterium glutamicum R] gi|24638152|sp|Q8NS78|RF2_CORGL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|166223627|sp|A4QCD3|RF2_CORGB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|21323567|dbj|BAB98194.1| Protein chain release factor B [Corynebacterium glutamicum ATCC 13032] gi|41325026|emb|CAF19507.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Corynebacterium glutamicum ATCC 13032] gi|140844881|dbj|BAF53880.1| hypothetical protein [Corynebacterium glutamicum R] Length = 368 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 161/352 (45%), Positives = 225/352 (63%), Gaps = 7/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + R+ L + DP LW + A+ + E H+ + I + Sbjct: 11 ELDSTLTTIEKVLNPQEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITD 70 Query: 62 IQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ R+ D I++ELA EED D SI +E +L+ + ++ + +++LSGE D+ +A + Sbjct: 71 LRQRIEDLPIMVELAEEEDGDTSIAEEELADLRSL---IDALEVKTMLSGEYDAREAVIN 127 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG Sbjct: 128 IRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQ 187 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ RR TSF+ + V PVV+ I+I ++D R+D YR+SG GG Sbjct: 188 LSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKVDSIDIPDADVRVDVYRSSGPGG 247 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIG 299 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q +R E+ +G Sbjct: 248 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDALG 307 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D ++A + Sbjct: 308 AGGNA--SWGNQMRSYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGI 357 >gi|116494437|ref|YP_806171.1| protein chain release factor B [Lactobacillus casei ATCC 334] gi|227535599|ref|ZP_03965648.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631186|ref|ZP_04674217.1| peptide chain release factor 2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065947|ref|YP_003787970.1| protein chain release factor B [Lactobacillus casei str. Zhang] gi|116104587|gb|ABJ69729.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus casei ATCC 334] gi|227186729|gb|EEI66796.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239525651|gb|EEQ64652.1| peptide chain release factor 2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438354|gb|ADK18120.1| Protein chain release factor B [Lactobacillus casei str. Zhang] gi|327381888|gb|AEA53364.1| Peptide chain release factor 2 [Lactobacillus casei LC2W] gi|327385049|gb|AEA56523.1| Peptide chain release factor 2 [Lactobacillus casei BD-II] Length = 368 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 154/342 (45%), Positives = 220/342 (64%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG FD D +R++ + +P W + A+ ++ L +++ L D Sbjct: 17 LGGHFDLDALNERITENEGRMAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENELEDL 76 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 EL +E D + QE ++ ++ +++ + + LL+G D N+A LE+H GAGGTE Sbjct: 77 EAGFELLQDEPDKDLQQEEEAKIKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGAGGTE 136 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDW +ML+RMY RWA++ FK E + G+EAGIKS TLLI G NAYG LK E+GVHR Sbjct: 137 SQDWGSMLMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHR 196 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DS RRHTSF+S+ V P +D+SIE+++ D +++ +R+SGAGGQH+N T SA Sbjct: 197 LVRISPFDSAGRRHTSFASVDVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINKTSSA 256 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+ H+PTG+V Q +RSQ +NKA A ML+AKLY+ E + + A + + ++ +G Sbjct: 257 VRLIHLPTGIVTSSQAQRSQFQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKDVAFG 316 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV PY MVKD RTN E + + V+DGDL+ F+ A L Sbjct: 317 SQIRSYVFHPYTMVKDHRTNYETGNGNAVMDGDLNPFINAYL 358 >gi|167755601|ref|ZP_02427728.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402] gi|237734350|ref|ZP_04564831.1| peptide chain release factor 2 [Mollicutes bacterium D7] gi|167704540|gb|EDS19119.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402] gi|229382580|gb|EEO32671.1| peptide chain release factor 2 [Coprobacillus sp. D7] Length = 365 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 159/298 (53%), Positives = 201/298 (67%), Gaps = 11/298 (3%) Query: 65 RLCDNLILLELALEEDDCS--ILQETSDNLQRIKLEVEYKQFES---------LLSGEAD 113 + D LLE L D + +++ T D + LE +Y FE LLSGE D Sbjct: 64 KTTDQYDLLETTLTSLDETYELVKNTEDQEFKEILESDYTVFEKELSKFETMMLLSGEHD 123 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 +A +E+H GAGGTESQDWA ML RMY R+A + +K E L+ DG+ AGIKS T+LIK Sbjct: 124 DLNAIVEIHPGAGGTESQDWAEMLFRMYQRYAANKGWKVEVLDYLDGDVAGIKSVTMLIK 183 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G N YG LK E+GVHRLVR+SP+DS RRHTSF+S+ V P ++ IEIEI +D +IDTY Sbjct: 184 GDNVYGHLKAEKGVHRLVRLSPFDSAKRRHTSFASVDVMPEFNNEIEIEIQSTDLKIDTY 243 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASGAGGQH+N TDSAVRITH+PT +VV CQ +RSQ +N+ QA ML++KLY+L L+K+ Sbjct: 244 RASGAGGQHINKTDSAVRITHLPTNIVVTCQSQRSQIQNREQAMVMLKSKLYQLMLEKQA 303 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + EI WG QIRSYVL PY +VKD R+ E +P VLDGDLD F+ A L Sbjct: 304 SELKELKGEQKEIAWGSQIRSYVLHPYSLVKDNRSGYESNNPKAVLDGDLDGFIYAYL 361 >gi|41409273|ref|NP_962109.1| peptide chain release factor 2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398093|gb|AAS05723.1| PrfB [Mycobacterium avium subsp. paratuberculosis K-10] Length = 373 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 163/353 (46%), Positives = 224/353 (63%), Gaps = 7/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + E H + I+E+ Sbjct: 15 LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120 + RL D +L ELA E+ + + + + ++ ++E + +LLSGE D +A + Sbjct: 75 RARLDDLPVLYELAAEDGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 134 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 135 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 194 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GG Sbjct: 195 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 254 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + + Sbjct: 255 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRSEERAEL-D 311 Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 312 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 364 >gi|157149715|ref|YP_001450721.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis substr. CH1] gi|189040006|sp|A8AY61|RF2_STRGC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157074509|gb|ABV09192.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis substr. CH1] Length = 364 Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 159/346 (45%), Positives = 217/346 (62%), Gaps = 2/346 (0%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +L G D + + ++ L K +P W + I A+ +E L ++ D Sbjct: 16 KLASFRGSLDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDL 75 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 ++ ILL+ L EDD + + K+ Y + LLS D+N+A LE+H G+ Sbjct: 76 FDESEILLDF-LAEDDSVQEELEEKLAELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGS 133 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDW +MLLRMYTR+ + FK E L+ G+EAGIKS TL +GP+AYG LK E Sbjct: 134 GGTEAQDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEM 193 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DS RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN Sbjct: 194 GVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNK 253 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 + VR+THIPTG+VVQ +R+Q+ N+ +A ML+AKLY+LE +K+ + + K E Sbjct: 254 VSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKE 313 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIRSYV PY MVKD RT+ E V+DGDLD F+ A L Sbjct: 314 ISWGSQIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYL 359 >gi|225165725|ref|ZP_03727521.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2] gi|224800034|gb|EEG18467.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2] Length = 341 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 147/254 (57%), Positives = 186/254 (73%) Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 E++ + + L+G+ D N+A + AGAGGTES DWA+ML RMYTRWAE+R F E ++ Sbjct: 72 ELDDLEINAFLTGQFDRNNAIFSIQAGAGGTESNDWADMLFRMYTRWAERRGFTVEVQDV 131 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 G++AGI ATLLIKG NAYG+ K E+GVHRLVRISP+DSN RRHTSF ++ V ++D Sbjct: 132 QPGDQAGISKATLLIKGENAYGYCKAERGVHRLVRISPFDSNQRRHTSFCAVDVIAEIND 191 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 I+IEI E + R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ KNKA A Sbjct: 192 EIKIEIPEDEIRVDVYRSSGKGGQGVNTTDSAVRLTHIPTGLVVVCQNERSQIKNKASAM 251 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 ++L+A+LYE + ++ + K EIGWG QIRSYVLQPYQMVKDLRT + + Sbjct: 252 SILKARLYEKKQDEQRAEMDKFYGEKGEIGWGAQIRSYVLQPYQMVKDLRTGVNTSDTQG 311 Query: 338 VLDGDLDDFMKATL 351 VLDGD+D F+ L Sbjct: 312 VLDGDIDRFINGWL 325 >gi|301100688|ref|XP_002899433.1| peptide chain release factor, putative [Phytophthora infestans T30-4] gi|262103741|gb|EEY61793.1| peptide chain release factor, putative [Phytophthora infestans T30-4] Length = 378 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 157/350 (44%), Positives = 223/350 (63%), Gaps = 3/350 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 R++ + + + Q L+ L + DP LW + A +++ L++ + + E+ Sbjct: 16 REIAVIHDVVTTTHNAQELAELRQEAADPKLWDDASNAASVVQRLAALESRETRVHELHR 75 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + D L LA EE+D S+L + + ++ E + + E LLS E D++ +LE+ AG Sbjct: 76 QFLDTKELYVLAKEEEDESMLGDCVSAMTVVRAEAQQLRLEFLLSHETDAHSCFLEIQAG 135 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGT+S DW ML RMY RW+E R F+ + ++ G+EAG +S L + G AYGW K E Sbjct: 136 AGGTDSCDWTAMLARMYARWSEMRGFQVQYVDESVGDEAGFRSVVLKLDGVYAYGWAKNE 195 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD---SIEIEISESDCRIDTYRASGAGGQ 241 GVHRLVRISP+DS RRHTSF+ + VYP+ + S EIE+S D RIDT+R+SG GGQ Sbjct: 196 AGVHRLVRISPFDSAGRRHTSFAQVRVYPMAAEGRSSAEIEVSTKDLRIDTFRSSGPGGQ 255 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN+TDSA+RITH+ TG+VVQ Q +RSQH+NKA+A MLRAKLY+ +L++ + Sbjct: 256 HVNSTDSAIRITHLRTGIVVQSQSDRSQHRNKAEAMAMLRAKLYQRKLEEEAKARQKFAQ 315 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG QIRSYVL PYQ+VKD RTN + + + VLDGD+D F++ L Sbjct: 316 GLGDNAWGNQIRSYVLHPYQLVKDHRTNYSEGNIAQVLDGDIDRFIEKML 365 >gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000] gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000] Length = 368 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 162/355 (45%), Positives = 226/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPEEAQKITSKLSHLQAEVRKAEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L +K ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAESELTLVKKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE +E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTELIETSYAEEAGIKSTTFSVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364 >gi|227431353|ref|ZP_03913406.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352946|gb|EEJ43119.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 372 Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 153/341 (44%), Positives = 218/341 (63%), Gaps = 1/341 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 G D + + ++ + +P W + +AK ++ E L N + +++ + + Sbjct: 22 GTLDMEALTEEIADYENRMTEPDFWNDNEKAKKVIEENNVLKNRRDSFLNLTNQVEELEL 81 Query: 72 LLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+E+A+E+ +D L E + + +++ E LL+ D+N+A LE+H G+GGTES Sbjct: 82 LIEMAVEDPEDEDTLGELEAGVANAQKDIDAYNLEQLLTEPYDANNAILEIHPGSGGTES 141 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW L RMYTRWA++ F+ E L+ H G+EAGI SAT+ + G NAYG+L+ E+GVHR Sbjct: 142 TDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFLRSEKGVHRF 201 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ+VN + V Sbjct: 202 VRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQNVNKVSTGV 261 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+VV ER+Q+ N+ A +L++KLY+LEL+K+E K E GWG Sbjct: 262 RLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTGEKMENGWGS 321 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L Sbjct: 322 QIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYL 362 >gi|195977853|ref|YP_002123097.1| peptide chain release factor 2 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225870173|ref|YP_002746120.1| peptide chain release factor 2 [Streptococcus equi subsp. equi 4047] gi|195974558|gb|ACG62084.1| peptide chain release factor 2 PrfB [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225699577|emb|CAW93198.1| peptide chain release factor 2 [Streptococcus equi subsp. equi 4047] Length = 338 Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 155/329 (47%), Positives = 216/329 (65%), Gaps = 2/329 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L K +P W + + A+ +E L ++Q+ + + LE+ L+EDD Sbjct: 5 IALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHDMQELSDETELYLEM-LDEDD- 62 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S+ +E +L ++ + + LLS D ++A LE+H G+GGTE+QDWA+ML RMYT Sbjct: 63 SVKEELEASLIKLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLFRMYT 122 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ + FK E L+ G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS RR Sbjct: 123 RFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV Sbjct: 183 HTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 +R+Q+ N+ +A ML+AKLY+LE +K+ E N + K EI WG QIRSYV PY M Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RTN E V+DGD++ F+ A L Sbjct: 303 VKDHRTNFEVAQVDKVMDGDIEGFIDAYL 331 >gi|326491925|dbj|BAJ98187.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 465 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 153/341 (44%), Positives = 222/341 (65%), Gaps = 1/341 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W ++R L E P LW++ + A + RE+ L I + + + +L +++ +L Sbjct: 116 LKWKWLLERSKQLAVVLEKPDLWEDPVFAGKVSREQGELMGKIKSVNQFEQQLMEHIDML 175 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 LA +E D + E+ L ++ E + K+ +LLSG+ D ++EV AGAGG ES DW Sbjct: 176 RLARDEGDNELETESMRALADMRREAKEKELNALLSGDNDPYPCFIEVQAGAGGVESMDW 235 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M++ MY WA++R ++ +E GE AGIK AT+ + G A+G+ K E GVHRLVRI Sbjct: 236 AAMVMNMYKSWAQRRGYRVTVIEEMPGELAGIKRATIKVDGEYAFGYAKSEIGVHRLVRI 295 Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ + S +I+ESD RI+ +R+ G GGQH NTT+SAVRI Sbjct: 296 SPFDSGKRRHTSFAAVAVIPILGESSSRYQINESDLRIERFRSGGPGGQHANTTESAVRI 355 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG CQ ERSQH N+A A +L+++L +LE+ ++ ++ S +EI WG QI Sbjct: 356 VHIPTGTTATCQNERSQHMNRASAMAVLQSRLDQLEITRQAQMNAEHTQSLSEISWGNQI 415 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSYVLQPY+MVKDLRTN E + P VL+GDLDDF+ + L++ Sbjct: 416 RSYVLQPYRMVKDLRTNYEVSDPDSVLEGDLDDFILSFLSL 456 >gi|307702035|ref|ZP_07639043.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261] gi|307616680|gb|EFN95869.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261] Length = 329 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 155/326 (47%), Positives = 210/326 (64%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 EELVEQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RTN E V+DGDLD F+ A L Sbjct: 299 HRTNFEVAQVDKVMDGDLDGFIDAYL 324 >gi|116617317|ref|YP_817688.1| peptide chain release factor 2 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272482|sp|Q03ZQ7|RF2_LEUMM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116096164|gb|ABJ61315.1| bacterial peptide chain release factor 2 (bRF-2) [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 372 Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 152/341 (44%), Positives = 219/341 (64%), Gaps = 1/341 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 G D + + ++ + +P W + +A+ ++ E L N + +++ + + Sbjct: 22 GTLDMEALTEEIADYENRMTEPDFWNDNEKAQKVIEENNVLKNRRDSFLNLTNQVEELEL 81 Query: 72 LLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+E+A+E+ +D L E + + + +++ E LL+ D+N+A LE+H G+GGTES Sbjct: 82 LIEMAVEDPEDEDTLGELEAGVAKAQKDIDAYNLEQLLTEPYDANNAILEIHPGSGGTES 141 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW L RMYTRWA++ F+ E L+ H G+EAGI SAT+ + G NAYG+L+ E+GVHR Sbjct: 142 TDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFLRSEKGVHRF 201 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ+VN + V Sbjct: 202 VRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQNVNKVSTGV 261 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+VV ER+Q+ N+ A +L++KLY+LEL+K+E K E GWG Sbjct: 262 RLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTGEKMENGWGS 321 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L Sbjct: 322 QIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYL 362 >gi|306825598|ref|ZP_07458937.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431959|gb|EFM34936.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 329 Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 154/326 (47%), Positives = 211/326 (64%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + +++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVEQLTELDKMMANYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLFFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT+ E + V+DGDLD F+ A L Sbjct: 299 HRTSFEVSQVDKVMDGDLDGFIDAYL 324 >gi|227505562|ref|ZP_03935611.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940] gi|227197859|gb|EEI77907.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940] Length = 370 Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 158/351 (45%), Positives = 219/351 (62%), Gaps = 6/351 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D +++ L + DP LW + A+ + I ++ Sbjct: 11 ELDSTLATIEKVMDPAALAEQVRELEAQAGDPSLWDDPAHAQQVTSALSAAQAKIRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ ELA EE D ++ D L+ + +E + ++LSGE D +A + + Sbjct: 71 LRSRVDDMPVMFELAEEEGDTAL---ADDELEDLGAAIEALEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I++ + D R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDGDVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q +R E+ +G Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 307 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E PS VLDGDLD F++A + Sbjct: 308 GGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDLDGFLEAGI 356 >gi|238063024|ref|ZP_04607733.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149] gi|237884835|gb|EEP73663.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149] Length = 373 Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 159/350 (45%), Positives = 223/350 (63%), Gaps = 3/350 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + + D D + + L + P LW + +A+ + + +++ I + ++ RL Sbjct: 17 LRNIEAVLDLDRLHEDKARLEEQASAPDLWDDQAKAQQVTSQLSYVNGEIDKLGSLRSRL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +LLELA EDD +L E + + ++ + +LLSGE DS +A + + AGAG Sbjct: 77 DDARVLLELAEAEDDPGVLAEVETEIGALTKSIQDMEVRTLLSGEYDSREALVAIRAGAG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L E G Sbjct: 137 GVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFAVKVPYAYGTLSVESG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PV + + I+I E++ R+D YR+SG GGQ VNTT Sbjct: 197 THRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQSVNTT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTE 305 DSAVR+THIPTG+VV CQ E+SQ +NKA A +L+A+L LE +++EE A + G + Sbjct: 257 DSAVRLTHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKLNGLKTDAA 314 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +PS V DG+LD F++A + +K Sbjct: 315 GSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGELDSFIEAGIRWRK 364 >gi|154496274|ref|ZP_02034970.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC 29799] gi|150274357|gb|EDN01434.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC 29799] Length = 373 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 152/349 (43%), Positives = 226/349 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ LG + A + L L +++ W N+ +A+ + + + L + + K+ Sbjct: 14 LKPELDELGQALGLEAAERELEMLESESASDGFWNNLEKAQKIQQRIKQLHHKVDGQKKR 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D L L E+ EE+D S++ E + ++ +E + +L +GE D N+ L +H Sbjct: 74 LGEWEDLLTLCEMGNEEEDESLVPELEEGFNKLTANMEEARLSTLFTGEYDDNNVVLAIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA MLLRMYTRWAE+ F+ + ++ DG+EAGIKSAT++I+G NAYG L+ Sbjct: 134 AGAGGTEAQDWAQMLLRMYTRWAERHDFEYQVVDFQDGDEAGIKSATVMIQGENAYGHLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SP+D+N+RR TSF+++ V P + + ++EI + + +R+SGAGGQH Sbjct: 194 SEHGVHRLVRVSPFDANARRQTSFAAVEVMPDLPEDADVEIRPEEYEMQVFRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+ H TG+VV CQ ERSQ +NK MLRAKL EL++Q+ E + + Sbjct: 254 INKTSSAVRLIHHATGIVVSCQTERSQFQNKDTCLRMLRAKLVELKMQQHAEKLSDIKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +I WG QIRSYV PYQ+VKD R+ E ++ + V+DGD+D F+ A L Sbjct: 314 QLKIEWGSQIRSYVFMPYQLVKDNRSGFETSNVNGVMDGDIDGFINAYL 362 >gi|297620623|ref|YP_003708760.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044] gi|297375924|gb|ADI37754.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044] Length = 326 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 161/322 (50%), Positives = 215/322 (66%), Gaps = 2/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E W + A+ ++ E L KE++ RL D L A E D +L + + Sbjct: 2 EAAGFWDDPDAAQQVITEINSLKQWTIPCKELKRRLEDVKELQPEAEEAGDEGLLADLNQ 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L RI+ E+ + +LSGE D+ + YL ++AGAGGTE+ DW ML RMY RW +KRK+ Sbjct: 62 ELFRIENELGELEIRRMLSGELDNKNCYLSINAGAGGTEACDWVEMLSRMYQRWCDKRKW 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E +++ GE AG KS TL + G A+G+ K E+GVHRLVRISP+DS SRRHTSF+S+ Sbjct: 122 KCEVVDMVPGEVAGTKSVTLKMTGNFAFGYSKAEKGVHRLVRISPFDSGSRRHTSFASVD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + D I+IEI+ D RIDT+RASGAGGQHVN TDSAVR+THIPTGVVV CQ +RSQ+ Sbjct: 182 VTPEITDDIQIEINPDDIRIDTFRASGAGGQHVNVTDSAVRMTHIPTGVVVSCQSQRSQN 241 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK + +L++KLYE+E+ +RE +I +G K +IGWG QIR+YV PY +VKD RT Sbjct: 242 QNKEACFKILKSKLYEMEVMEREKKIKELG-GEKMDIGWGSQIRNYVFHPYSLVKDTRTK 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E + V+DG LD F+ A L Sbjct: 301 VESANVQAVMDGSLDLFVNAYL 322 >gi|145631266|ref|ZP_01787039.1| peptide chain release factor 2 [Haemophilus influenzae R3021] gi|145633057|ref|ZP_01788789.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae 3655] gi|145637033|ref|ZP_01792696.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittHH] gi|145639267|ref|ZP_01794873.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittII] gi|145641183|ref|ZP_01796763.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae R3021] gi|148828361|ref|YP_001293114.1| peptide chain release factor 2 [Haemophilus influenzae PittGG] gi|229844833|ref|ZP_04464971.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1] gi|229846242|ref|ZP_04466354.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1] gi|319897322|ref|YP_004135518.1| peptide chain release factor 2 [Haemophilus influenzae F3031] gi|144983193|gb|EDJ90688.1| peptide chain release factor 2 [Haemophilus influenzae R3021] gi|144986283|gb|EDJ92862.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae 3655] gi|145269687|gb|EDK09627.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittHH] gi|145271570|gb|EDK11481.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittII] gi|145274020|gb|EDK13886.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae 22.4-21] gi|148719603|gb|ABR00731.1| peptide chain release factor 2 [Haemophilus influenzae PittGG] gi|229811246|gb|EEP46963.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1] gi|229812214|gb|EEP47905.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1] gi|317432827|emb|CBY81192.1| peptide chain release factor 2 [Haemophilus influenzae F3031] Length = 248 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 151/245 (61%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ + Sbjct: 61 SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 LELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|221633612|ref|YP_002522838.1| peptide chain release factor 2, programmed frameshift [Thermomicrobium roseum DSM 5159] gi|254790922|sp|B9L0E3|RF2_THERP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|221155396|gb|ACM04523.1| peptide chain release factor 2, programmed frameshift [Thermomicrobium roseum DSM 5159] Length = 374 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 158/351 (45%), Positives = 226/351 (64%), Gaps = 4/351 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L+ +G + Q++ L + DP LWQ+ A+ L+R L + + + Sbjct: 11 ELVERLDRIGVRLCLPSKRQQIEQLEHEAADPDLWQDPQRAQSLLRRLSQLRDLVQEWET 70 Query: 62 IQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + + D LLEL AL DD + + + V + LL+G+ D +DA L Sbjct: 71 LSQQARD---LLELRALASDDLELAGQVEQEATELAERVRQLELRLLLTGQYDGHDAILA 127 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 VHAG GG ++QDWA MLLRMY RWA++ F E +++ +GEEAGIKSAT+ ++GP AYG+ Sbjct: 128 VHAGTGGVDAQDWAEMLLRMYLRWAQRAGFAAEVVDLLEGEEAGIKSATVEVRGPYAYGY 187 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE G HRLVR+SP+D+ RRHTSF+ + V P+V++ ++EI E D RIDT+RASG GG Sbjct: 188 LKGEAGTHRLVRLSPFDAAHRRHTSFALVEVLPLVEEDDDVEIREEDIRIDTFRASGHGG 247 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVRITH+PTG+VV CQ ERSQ +N+ A +L+A+L EL++++R+E + Sbjct: 248 QHVNKTESAVRITHLPTGIVVTCQNERSQIQNRETAMKILKARLLELKIRQRQEEQARLK 307 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG +IRSYVL PY MV D RT + + VL+G++D F++A L Sbjct: 308 GKPVVTGWGNRIRSYVLHPYTMVTDHRTEVSTPNIQAVLEGEIDPFIEAYL 358 >gi|145225030|ref|YP_001135708.1| peptide chain release factor 2 [Mycobacterium gilvum PYR-GCK] gi|189040001|sp|A4TDE5|RF2_MYCGI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|145217516|gb|ABP46920.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium gilvum PYR-GCK] Length = 372 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 161/354 (45%), Positives = 223/354 (62%), Gaps = 8/354 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + + D R+ L + DP LW + A+ + + H N + ++E+ Sbjct: 12 LDTTLTTVERVVNVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE+ E L +++ ++ + +LLSGE D +A + Sbjct: 72 RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LERKRLEERAEM- 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 362 >gi|15594420|ref|NP_212208.1| peptide chain release factor 2 [Borrelia burgdorferi B31] gi|2687953|gb|AAC66459.1| peptide chain release factor 2 (prfB) [Borrelia burgdorferi B31] Length = 348 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 158/348 (45%), Positives = 226/348 (64%), Gaps = 14/348 (4%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ D Sbjct: 4 TFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIKD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123 L E+A E D + L+ + L+ KQ++ LL+ E D+N+A+L +H+ Sbjct: 64 LSDLCEIAENEKDTNGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHS 115 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK Sbjct: 116 GAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKS 174 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHV Sbjct: 175 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHV 234 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K Sbjct: 235 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTK 294 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EI WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 295 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 342 >gi|170718675|ref|YP_001783869.1| peptide chain release factor 2 [Haemophilus somnus 2336] gi|168826804|gb|ACA32175.1| peptide chain release factor 2 [Haemophilus somnus 2336] Length = 289 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 156/280 (55%), Positives = 208/280 (74%), Gaps = 1/280 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLEL++E +D + E + ++ ++ +F + SG+ D+ D Y+++ AG+GGTE+Q Sbjct: 7 LLELSVEAEDETTFNEAVAEAEELEKKLATLEFRRMFSGQHDNCDCYVDLQAGSGGTEAQ 66 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLLRMY RWAE + FKTE +E+ G+ AG+KSAT+ I G A+GWL+ E G+HRLV Sbjct: 67 DWTEMLLRMYLRWAESKGFKTELVEVSSGDVAGLKSATIRIAGEYAFGWLRTETGIHRLV 126 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DSN+RRHTSF++ +VYP +DD IEIEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 127 RKSPFDSNNRRHTSFAAAFVYPEIDDDIEIEINPADLRIDVYRASGAGGQHVNKTESAVR 186 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIP+G+VVQCQ RSQH+NK QA L+AKLYE+E+ K+ E SK++IGWG Q Sbjct: 187 ITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYEMEMMKKNADKQAMEDSKSDIGWGSQ 246 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 247 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 285 >gi|255311271|ref|ZP_05353841.1| peptide chain release factor 2 [Chlamydia trachomatis 6276] gi|255317573|ref|ZP_05358819.1| peptide chain release factor 2 [Chlamydia trachomatis 6276s] gi|297748590|gb|ADI51136.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia trachomatis D-EC] gi|297749470|gb|ADI52148.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia trachomatis D-LC] Length = 334 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/323 (49%), Positives = 211/323 (65%), Gaps = 9/323 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V+ A + L +S E+++++ ++ LE+++ S E L++ Sbjct: 10 FWDDVVRAGKISERIARLKQQLSEFNELKNKVS----AIQFFLEDEESSKDLEMQKELEK 65 Query: 95 IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + E K E LLSGE D N +L ++AGAGGTES DW MLLRMY RWA + Sbjct: 66 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ Sbjct: 186 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 245 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+RT Sbjct: 246 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 305 Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352 E + ++DG+ LD F+KA L Sbjct: 306 EVGNIQAMMDGELLDAFIKAYLV 328 >gi|251771888|gb|EES52462.1| peptide chain release factor 2 [Leptospirillum ferrodiazotrophum] Length = 294 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 149/274 (54%), Positives = 199/274 (72%), Gaps = 2/274 (0%) Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 +D IL E + L ++ + E +LS E + A LE+H GAGGTESQDWA MLLR Sbjct: 3 EDPEILGEAARILPLFVSRIDQLELEEILSDEYSDSPALLEIHPGAGGTESQDWAQMLLR 62 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY RWAE + ++T +++ GEEAGIKSATL +KG +A+G+L+ E GVHRLVRISP+D+ Sbjct: 63 MYLRWAESKGYETAVIDLQPGEEAGIKSATLRVKGESAFGYLQAESGVHRLVRISPFDAA 122 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 RRHTSF+S++VYP ++ + +EI + D RIDT+RAS AGGQHVN T SAVR+THIPTG+ Sbjct: 123 KRRHTSFASVFVYPEIEGEVTVEIRDEDIRIDTFRASSAGGQHVNKTSSAVRLTHIPTGI 182 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWGRQIRSYVL 317 V+ Q ERSQ +N+ A+ +L+A+L+ELE QK++ E+ I G SK E WG QIRSYVL Sbjct: 183 VISSQNERSQIQNREMAFKVLKARLFELERQKKKAELDAISGAESKKENAWGSQIRSYVL 242 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QPYQ+VKD RT IE + +VLDG +D +++ L Sbjct: 243 QPYQIVKDHRTGIESSRVDEVLDGKIDLYIRGYL 276 >gi|319776546|ref|YP_004139034.1| peptide chain release factor 2 [Haemophilus influenzae F3047] gi|317451137|emb|CBY87370.1| peptide chain release factor 2 [Haemophilus influenzae F3047] Length = 248 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 194/245 (79%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D+ + Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGEHDACNCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ + Sbjct: 61 SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ + E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 LELQKKNADKQVMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|237802887|ref|YP_002888081.1| peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT] gi|237804809|ref|YP_002888963.1| peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT] gi|231273109|emb|CAX10022.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT] gi|231274121|emb|CAX10915.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT] Length = 368 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/323 (49%), Positives = 211/323 (65%), Gaps = 9/323 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V+ A + L +S E+++++ ++ LE+++ S E L++ Sbjct: 44 FWDDVVRAGKISERIARLKQQLSEFNELKNKVS----AIQFFLEDEESSKDLEMQKELEK 99 Query: 95 IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + E K E LLSGE D N +L ++AGAGGTES DW MLLRMY RWA + Sbjct: 100 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 159 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ Sbjct: 160 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 219 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ Sbjct: 220 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 279 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+RT Sbjct: 280 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 339 Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352 E + ++DG+ LD F+KA L Sbjct: 340 EVGNIQAMMDGELLDAFIKAYLV 362 >gi|296118845|ref|ZP_06837421.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM 20306] gi|295968334|gb|EFG81583.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM 20306] Length = 367 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/350 (45%), Positives = 221/350 (63%), Gaps = 6/350 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L + + D +R+ L + DP LW + A+ + E + + + Sbjct: 12 LSATLTTIEKVMDPRAMEERVRELEAQAGDPSLWDDPDHAQKVTSELSSTQAKLRKLSAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D ++ ELA EE D S+ D L ++ VE + ++LSG+ D +A + + Sbjct: 72 RGRLEDLPVMYELAEEEGDASL---ADDELDAVRDAVETLEVTTMLSGDYDQREAVINIR 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGTLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVR+SP+D+ +RR TSF+ + V PVV+ + IEI +S+ R+D YR+SG GGQ Sbjct: 189 VEQGAHRLVRLSPFDNQNRRQTSFAEVEVLPVVEQTDSIEIPDSEVRVDVYRSSGPGGQS 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGES 301 VNTTDSAVR+TH+PTG++V CQ E+SQ +NKA A +L+AKL E + Q +R E+ +G Sbjct: 249 VNTTDSAVRLTHVPTGIMVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDALGAG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E PS VL GD+DDF++A + Sbjct: 309 GNA--SWGNQMRSYVLHPYQMVKDLRTNHEVGDPSKVLGGDIDDFLEAGI 356 >gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074] gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074] Length = 371 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 161/355 (45%), Positives = 224/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA EDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RSRLDDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|147679087|ref|YP_001213302.1| protein chain release factor B [Pelotomaculum thermopropionicum SI] gi|146275184|dbj|BAF60933.1| protein chain release factor B [Pelotomaculum thermopropionicum SI] Length = 336 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 160/328 (48%), Positives = 219/328 (66%), Gaps = 2/328 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 L + +P W +A+ ++ L + ++ + + L D +L EL EE+D + Sbjct: 1 MLERQMLEPGFWDGQEKAQKAVQRLSSLRDRVAVFQRLDKDLEDLEVLAELGEEEEDEAA 60 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E L + +V + LLSG D +A + +HAGAGGTE+QDW MLLRMYTRW Sbjct: 61 AAEVKQGLAVVAQKVAEMELTVLLSGPYDRGNAIVALHAGAGGTEAQDWVEMLLRMYTRW 120 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AE+R FK E L++ G+EAG KSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+ RRHT Sbjct: 121 AERRGFKVEVLDLLPGDEAGTKSATIEVIGPNAYGYLRSEKGVHRLVRISPFDAAGRRHT 180 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S+ V P VDD ++++I+ D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ Sbjct: 181 SFASVDVLPEVDDEVDVKINPDDLKIDTFRSGGAGGQHVNKTDSAVRITHLPTGIVVTCQ 240 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 ERSQ N+ A ML+A+L +LEL+K+E E+A + + EI WG QIRSYV PY +V Sbjct: 241 NERSQLANRLAAMKMLKARLIDLELRKKEAELAAL-RGEQQEIAWGSQIRSYVFHPYSLV 299 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KD RT E + V+DG++D F+ A L Sbjct: 300 KDHRTGHETGNVGAVMDGEIDSFIAAYL 327 >gi|116511800|ref|YP_809016.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris SK11] gi|122940216|sp|Q02ZM8|RF2_LACLS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116107454|gb|ABJ72594.1| bacterial peptide chain release factor 2 (bRF-2) [Lactococcus lactis subsp. cremoris SK11] Length = 365 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 148/348 (42%), Positives = 221/348 (63%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S ++N D D + ++ L P W + A+ ++ E L + + Sbjct: 14 SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + L + +LE+ EE D + E + + ++E + E +L+ D +A LE+H Sbjct: 74 NMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTESQDW +ML+RMYTRW E FK E L+ DG+ AG+KS + G NAYG+L+G Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+TH+PTG+VVQ +R+Q+ N+ +A ML++KLY+LE+ K++ + + Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +EI WG QIRSYV PYQ+VKD RT E S+V+DG++D F+ A L Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYL 361 >gi|225549713|ref|ZP_03770678.1| peptide chain release factor 2 [Borrelia burgdorferi 118a] gi|225369673|gb|EEG99121.1| peptide chain release factor 2 [Borrelia burgdorferi 118a] Length = 348 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 158/348 (45%), Positives = 226/348 (64%), Gaps = 14/348 (4%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ D Sbjct: 4 TFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123 L E+A E D + L+ + L+ KQ++ LL+ E D+N+A+L +H+ Sbjct: 64 LSDLCEIAENEKDTNGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHS 115 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK Sbjct: 116 GAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKS 174 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHV Sbjct: 175 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHV 234 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K Sbjct: 235 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTK 294 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EI WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 295 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 342 >gi|227549373|ref|ZP_03979422.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM 44291] gi|227078558|gb|EEI16521.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM 44291] Length = 365 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 157/350 (44%), Positives = 223/350 (63%), Gaps = 6/350 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R L + DP LW + A+ + E ++ + + + Sbjct: 12 LDSTLTTIEKVIDLDELAARARELEQQANDPSLWDDPAHAQKVTTELSNVQARLKKVASL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++R+ D ++ ELA EE + +++ D L ++ + + +++LSGE D +A + + Sbjct: 72 RERIDDLPVMYELAEEEGEPALV---DDELAALEESIGSLEVQTMLSGEYDEREAVVNIR 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMYTRWAEK K E +I EEAGIKSAT +++G YG L Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVRGEYMYGQLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I +SD R+D YR+SG GGQ Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDSDIRVDVYRSSGPGGQS 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301 VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A +L++KL LE +++EE A + Sbjct: 249 VNTTDSAVRITHLPTGIVVTCQNEKSQIQNKASALGVLQSKL--LERKRQEEKAEMDALG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D F+++ + Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGI 356 >gi|219887937|gb|ACL54343.1| unknown [Zea mays] Length = 467 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 152/335 (45%), Positives = 216/335 (64%), Gaps = 1/335 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W ++R L E P LW++ + A + RE+ L I + + + L +++ +L Sbjct: 118 LKWGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEML 177 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 LA EE+D + E+ L ++ + K+ +LLSG+ DS ++EV AGAGGTES DW Sbjct: 178 RLAREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDW 237 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M++ MY WA++R +K +E GE AGIK AT+ + G A+G+ K E GVHRLVRI Sbjct: 238 AAMVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 297 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D+ +I +SD RI+ +R+ G GGQH NTT+SA+RI Sbjct: 298 SPFDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRI 357 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ Q ERSQH NKA A +L+++L +LE+ ++ ++ S EI WG QI Sbjct: 358 VHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQI 417 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 RSYVL PY+MVKDLRTN E + P VL+GDLDDF+ Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFI 452 >gi|242041179|ref|XP_002467984.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor] gi|241921838|gb|EER94982.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor] Length = 467 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 151/335 (45%), Positives = 216/335 (64%), Gaps = 1/335 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W ++R L E P LW++ + A + RE+ L I + + + L +++ +L Sbjct: 118 LKWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEML 177 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 LA EE+D + E+ L ++ + K+ +LLSG+ DS ++EV AGAGGTES DW Sbjct: 178 RLAREENDNELEMESMRALADMRRSAKEKELNALLSGDNDSCPCFIEVQAGAGGTESMDW 237 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M++ MY WA++R + +E GE AGIK AT+ + G A+G+ K E GVHRLVRI Sbjct: 238 AAMVMNMYRSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 297 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D+ +I +SD RI+ +R+ G GGQH NTT+SA+RI Sbjct: 298 SPFDSGKRRHTSFAAVAVIPILGDAASRYQIKDSDLRIERFRSGGPGGQHANTTESAIRI 357 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ ++ S EI WG QI Sbjct: 358 VHIPTGISATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQI 417 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 RSYVL PY+MVKDLRTN E + P VL+GD+DDF+ Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDIDDFI 452 >gi|226528475|ref|NP_001148129.1| peptide chain release factor 2 [Zea mays] gi|195616002|gb|ACG29831.1| peptide chain release factor 2 [Zea mays] Length = 467 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 152/335 (45%), Positives = 216/335 (64%), Gaps = 1/335 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W ++R L E P LW++ + A + RE+ L I + + + L +++ +L Sbjct: 118 LKWGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEML 177 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 LA EE+D + E+ L ++ + K+ +LLSG+ DS ++EV AGAGGTES DW Sbjct: 178 RLAREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDW 237 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M++ MY WA++R +K +E GE AGIK AT+ + G A+G+ K E GVHRLVRI Sbjct: 238 AAMVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 297 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D+ +I +SD RI+ +R+ G GGQH NTT+SA+RI Sbjct: 298 SPFDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRI 357 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ Q ERSQH NKA A +L+++L +LE+ ++ ++ S EI WG QI Sbjct: 358 VHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQI 417 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 RSYVL PY+MVKDLRTN E + P VL+GDLDDF+ Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFI 452 >gi|257452270|ref|ZP_05617569.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R] gi|257465930|ref|ZP_05630241.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC 25563] gi|315917086|ref|ZP_07913326.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC 25563] gi|317058813|ref|ZP_07923298.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R] gi|313684489|gb|EFS21324.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R] gi|313690961|gb|EFS27796.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC 25563] Length = 326 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 157/274 (57%), Positives = 200/274 (72%), Gaps = 9/274 (3%) Query: 87 ETSDNLQRIKLEVEYKQF----ES-----LLSGEADSNDAYLEVHAGAGGTESQDWANML 137 E D + +I+LE ++KQ ES LL GE D N+A + +H+GAGGTE+ DWA+ML Sbjct: 47 EAGDEMSQIELEEKHKQLLKDMESFSTSLLLDGEYDGNNAIVTIHSGAGGTEACDWADML 106 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMYTRW +K+K E ++ G+ GIKS T L+ G +AYG+LK E+G+HRLVRISP+D Sbjct: 107 YRMYTRWCNDKKYKVEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFD 166 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N +RHTSF+S+ V P VD+S+E+EI SD RIDTYRASGAGGQHVN TDSAVRITH PT Sbjct: 167 ANKKRHTSFASVEVVPEVDESVEVEIEASDIRIDTYRASGAGGQHVNMTDSAVRITHFPT 226 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VV CQ+ERSQ N+ A ML++KL E+EL+K+EE + ++EIGWG QIRSYV Sbjct: 227 GIVVTCQKERSQLSNRETAMKMLKSKLLEIELKKKEEEMKKIQGEQSEIGWGSQIRSYVF 286 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QPY MVKD RT +E + V+DGDLDDFM L Sbjct: 287 QPYTMVKDHRTGVEIGNIKAVMDGDLDDFMNGYL 320 >gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] Length = 368 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 162/355 (45%), Positives = 224/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S ++I ESD R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL LE +++EE A + ++ Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKL--LERRRQEEQAKM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364 >gi|227832559|ref|YP_002834266.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC 700975] gi|262183572|ref|ZP_06042993.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC 700975] gi|254790912|sp|C3PES4|RF2_CORA7 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|227453575|gb|ACP32328.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC 700975] Length = 368 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 158/351 (45%), Positives = 221/351 (62%), Gaps = 3/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS L + + D + +R+ L + DP LW + A+ + E + + Sbjct: 11 ELSATLTSIEKVMDPEAVSERVRELEAQAGDPSLWDDPDHAQKVTSELSAQQAKLRKLNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ ELA EE D + + L+ + +E + ++LSGE D +A + + Sbjct: 71 LRGRIEDLPVMSELAEEEGDEASQELVETELKELGAAIESLEVTTMLSGEYDEREAVINI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IE+ +S+ R+D YR+SG GGQ Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDSEVRVDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q +R E+ +G Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F+++ + Sbjct: 311 GGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLESGI 359 >gi|148378178|ref|YP_001252719.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 3502] gi|148287662|emb|CAL81727.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 3502] Length = 325 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 151/322 (46%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 2 QNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEIIS 60 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + IK E + + E+LLSGE D N+ + +H+ GGT++QDW +ML RMYTRWAEK F Sbjct: 61 EYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSEVGGTDAQDWTDMLFRMYTRWAEKEGF 120 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 AVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASIE 180 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQH Sbjct: 181 VLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQH 240 Query: 271 KNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +L++KL EL E +E+I ++ K ++GWG QIRSYV PY +VKD RT Sbjct: 241 TNKETAMKVLKSKLVELKERSHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYL 321 >gi|171910508|ref|ZP_02925978.1| peptide chain release factor 2 [Verrucomicrobium spinosum DSM 4136] Length = 359 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 155/345 (44%), Positives = 217/345 (62%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD L L + P W N A+ + +L N I ++E++ RL D Sbjct: 5 GGIFDVGKLKSDLETLEDELARPEFWDNQERARKTIDTVNNLKNRILPLEELERRLEDFF 64 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L E+A E+D + E ++ + + LL+GE D A++ +H GAGGTES Sbjct: 65 VLGEIAQHENDLASWTEVEKEYHAMEKALSDFELAMLLTGELDKKGAFVTIHCGAGGTES 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLRMY RW E+ +KTE ++ GEE G++SA + G A+G L E+GVHRL Sbjct: 125 CDWADMLLRMYQRWCERSGYKTEMVDFAPGEEVGVRSAVFRVTGDYAFGKLNCERGVHRL 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS RRHTSF+S+ V P VD+ I IE++E+D + +TYR+ G GGQ+VN ++AV Sbjct: 185 VRISPFDSAKRRHTSFASVDVTPEVDEDIGIELNEADIKFETYRSGGKGGQNVNKVETAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+ H PTG++V CQ +RSQ KN+ A NML+AKLY+LE K++ K ++ WG Sbjct: 245 RLIHEPTGIIVNCQVQRSQGKNREMAMNMLKAKLYQLEQDKKKTEMERQYGEKGDVAWGS 304 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYV QPYQMVKD RT + + +V+DGDLD F++A L +K Sbjct: 305 QIRSYVFQPYQMVKDHRTGEKTGNVGNVMDGDLDAFIEAKLRGRK 349 >gi|260914424|ref|ZP_05920893.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325] gi|260631525|gb|EEX49707.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325] Length = 248 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 192/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AGIK Sbjct: 1 MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ + Sbjct: 61 SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +ELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 MELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|76787098|ref|YP_329299.1| peptide chain release factor 2 [Streptococcus agalactiae A909] gi|123602195|sp|Q3K2F4|RF2_STRA1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|76562155|gb|ABA44739.1| peptide chain release factor 2, programmed frameshift [Streptococcus agalactiae A909] Length = 365 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 154/338 (45%), Positives = 218/338 (64%), Gaps = 2/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D + ++ L + +P W + I A+ +E L +Q+ + +LL Sbjct: 24 LDLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLL 83 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ L+EDD S+ +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW Sbjct: 84 EM-LDEDD-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDW 141 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ++LLRMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRI Sbjct: 142 GDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRI 201 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+T Sbjct: 202 SPFDSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLT 261 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIR Sbjct: 262 HIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIR 321 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV PY MVKD RTN E V+DG+++ F+ A L Sbjct: 322 SYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYL 359 >gi|293365065|ref|ZP_06611782.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037] gi|307702226|ref|ZP_07639186.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037] gi|291316515|gb|EFE56951.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037] gi|307624239|gb|EFO03216.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037] Length = 325 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 209/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L N + +++++ + ILL+ E D S+ E + Sbjct: 3 EPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVHDELVEQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LTELDMMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|110597266|ref|ZP_01385554.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031] gi|110341102|gb|EAT59570.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031] Length = 363 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 158/347 (45%), Positives = 228/347 (65%), Gaps = 5/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIK-EIQDR 65 N GG+FD D +++ L T DP W + EA +++E +H + K +++ Sbjct: 16 NSYGGIFDVDQRKEKVEDLEKITADPAFWNDQKEAHKILKELNEHKTWTEGYEKLAAKEK 75 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 +C L LE+A E +D S E S + I+ E+ +F+++LSG+ D+ +A + +HAGA Sbjct: 76 VC--LDELEIASELEDESFSDELSTAIAEIEQEIAAIEFKNMLSGKDDAGNALITIHAGA 133 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+G AYG+LK E Sbjct: 134 GGTEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIQGAYAYGYLKAEN 193 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR+SPYDSN+RRHTSF+S++ YP +EIE+ + D + T+R+ G GGQ+VN Sbjct: 194 GVHRLVRVSPYDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNK 253 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 ++AVRI H+PTG+VV CQ+ERSQ +N+ +A ML A+LY+ + ++ + E K + Sbjct: 254 VETAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQREEEDAKKREIEGKKKK 313 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 I WG QIRSYVL + +KD RTN E+ VLDGDLD+FM+ L+ Sbjct: 314 IEWGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEHYLS 359 >gi|85057585|ref|YP_456501.1| peptide chain release factor 2 [Aster yellows witches'-broom phytoplasma AYWB] gi|84789690|gb|ABC65422.1| bacterial peptide chain release factor 2 [Aster yellows witches'-broom phytoplasma AYWB] Length = 370 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 160/334 (47%), Positives = 217/334 (64%), Gaps = 5/334 (1%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q + LN + WQN +A + ++ L + + ++ ++ D L + Sbjct: 31 QTIEKLNCAMQKEDFWQNPKKAVTISQQFNDLQDKKNTLEILEQNYLDLETFFNLNESPN 90 Query: 81 DCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + S +L+E NL + + + K F L+ D N+A L H GAGGTESQDW ML R Sbjct: 91 EASALLEEELKNLTKSVFDFKIKIF---LNQPYDINNAILLFHPGAGGTESQDWCEMLFR 147 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY ++A+K+ FKTE L+ GE AG+KSATLLIKG AYG+LK E+GVHRLVRISP+DSN Sbjct: 148 MYQKYAQKKNFKTEILDYQLGEGAGVKSATLLIKGTYAYGYLKAEKGVHRLVRISPFDSN 207 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 S+RHTSF + V P +++ I+I + D +ID +R+SGAGGQHVNTTDSAVRITH+PTG+ Sbjct: 208 SKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQHVNTTDSAVRITHLPTGL 267 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 VV CQ ERSQ KNK +A ML+ KL++L Q++E+ A +S + E GWG QIRSYV Sbjct: 268 VVGCQNERSQIKNKEKALQMLKTKLFQLASKQQKEQNAKKFQSDQKENGWGSQIRSYVFH 327 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 PY+MVKD RTN E V+DG++D+F+ L Sbjct: 328 PYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYLT 361 >gi|25453244|sp|P59102|RF2_BUCAP RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 364 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 146/284 (51%), Positives = 212/284 (74%), Gaps = 1/284 (0%) Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +I L+LA+E D +I+QE S+ +++I +++ +F + S + D + Y++V AG+GG + Sbjct: 80 IIFLDLAIETKDNAIIQEISEEIKKIAEKIQELEFYRMFSNQHDHCNCYIDVQAGSGGVD 139 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW+ +LLRMY +W++K+ FKTE +E GE GIKS+T+ + G A+GWL+ E G+HR Sbjct: 140 AQDWSKILLRMYLKWSDKKGFKTEIIEESTGEIVGIKSSTIKVSGQYAFGWLRTETGIHR 199 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 L+R SP+DS RRHTSFSSI++YP ++D I IEI+ SD RID YRASGAGGQHVN T+SA Sbjct: 200 LIRKSPFDSGKRRHTSFSSIFIYPDIEDKINIEINPSDLRIDVYRASGAGGQHVNRTESA 259 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +V QCQ RSQHKNK QA +++KLYE+++++++E E +K++I WG Sbjct: 260 VRITHLPTNIVTQCQNNRSQHKNKEQAIKQMKSKLYEMKIKEKKEKQKKIEKNKSDISWG 319 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSY+L + +KDLRT +EK + VLDGDLDDF++ +L + Sbjct: 320 NQIRSYILDNSK-IKDLRTGVEKYNVQSVLDGDLDDFIEQSLIM 362 >gi|260889274|ref|ZP_05900537.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254] gi|260860685|gb|EEX75185.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254] Length = 352 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 178/364 (48%), Positives = 233/364 (64%), Gaps = 22/364 (6%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW-----QNVIEA----KMLMRERQH 51 MKL+ L GG+FD +N + L KT + W Q +++A K L+ E Sbjct: 1 MKLT--LKKSGGIFDIENLKNEIDGLEKKTFEADFWNSENSQEILKAISTNKKLLEEYSS 58 Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L+ + I +E +E D S E Q +K E++ + + LL E Sbjct: 59 LNGLFEDVSTI----------IEF-IEMGDNSFENELEQKAQDLKNEIDNFKTKLLLDEE 107 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+A L +++GAGGTE+ DWA ML RMY RWA + FK E L+ GEEAGIKS TL Sbjct: 108 YDMNNAILTINSGAGGTEACDWAEMLYRMYDRWANRHDFKVEILDSLAGEEAGIKSVTLN 167 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG AYG+LKGE+GVHRLVRISP+DSN+RRHTSF+++ V P ++D +EI+I D +ID Sbjct: 168 IKGNYAYGYLKGEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVEIDIRTEDLKID 227 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYRASGAGGQHVNTTDSAVRITHIPT VV CQ ERSQ KN+ A +L++KL+ELEL+K Sbjct: 228 TYRASGAGGQHVNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEK 287 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RE+ + ++++I WG QIRSYV QPY+MVKD RT E+ + V+DGD+D F+ L Sbjct: 288 REKEMAELKGTESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYL 347 Query: 352 AIKK 355 K Sbjct: 348 KYAK 351 >gi|125624350|ref|YP_001032833.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris MG1363] gi|166223629|sp|A2RLF5|RF2_LACLM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|124493158|emb|CAL98122.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris MG1363] gi|300071134|gb|ADJ60534.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris NZ9000] Length = 365 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 148/348 (42%), Positives = 220/348 (63%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S ++N D D + ++ L P W + A+ ++ E L + + Sbjct: 14 SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L + +LE+ EE D + E + + ++E + E +L+ D +A LE+H Sbjct: 74 TMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTESQDW +ML+RMYTRW E FK E L+ DG+ AG+KS + G NAYG+L+G Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+TH+PTG+VVQ +R+Q+ N+ +A ML++KLY+LE+ K++ + + Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +EI WG QIRSYV PYQ+VKD RT E S+V+DG++D F+ A L Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYL 361 >gi|297588165|ref|ZP_06946809.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516] gi|297574854|gb|EFH93574.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516] Length = 329 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 149/282 (52%), Positives = 201/282 (71%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++LE++ E++ +E S L+ ++ +V+ + ++LL GE D N+A + +HAGAGGTE+ Sbjct: 46 MMLEISKEDNTEEYEKEISKTLKSLEEKVDEFKIKTLLVGEYDKNNAIMSIHAGAGGTEA 105 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW +K+ + + + E GIKS +L+++G NAYG+LK E+GVHRL Sbjct: 106 QDWAEMLLRMYTRWIADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRL 165 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D RRHTSF+S+ V+P + DS I+I + D ++DTYRASGAGGQHVN TDSAV Sbjct: 166 VRISPFDQQKRRHTSFASVDVFPEIKDSHNIQIDDKDLKVDTYRASGAGGQHVNMTDSAV 225 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTGV VQCQ ERSQ N+ A +ML AKL ++ +++ E + +I WG Sbjct: 226 RITHIPTGVTVQCQTERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGS 285 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV QPY +VKD RTN E + DVLDGDLD F+ A L+ Sbjct: 286 QIRSYVFQPYTLVKDHRTNFESSQVQDVLDGDLDKFINAYLS 327 >gi|270292341|ref|ZP_06198552.1| peptide chain release factor 2, programmed [Streptococcus sp. M143] gi|270278320|gb|EFA24166.1| peptide chain release factor 2, programmed [Streptococcus sp. M143] Length = 329 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 154/326 (47%), Positives = 210/326 (64%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + +++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVR 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT+ E V+DGDLD F+ A L Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324 >gi|46396627|sp|Q89AC4|RF2_BUCBP RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 366 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 156/349 (44%), Positives = 228/349 (65%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L Q+N L D+D RL +N + + P W++ K + +E+ L + ++ I +I Sbjct: 15 LVSQINKLKRRLDYDIKKNRLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKI 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + +L L + SIL + I+ + + S+ G+ D Y+++ Sbjct: 75 DNDVQELIDILNLENSNNINSILDNVLYEFKNIEKSIHELEKCSMFLGKYDYLSCYVDIQ 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GG E+QDWA+MLLRMY RWAE +KFK + +E GE GIKSAT+ + G A+GW + Sbjct: 135 SGSGGVEAQDWASMLLRMYVRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFR 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP++++ RRHTSFSS++VYP++DD+I ++I+ D +ID YRASGAGGQH Sbjct: 195 TETGIHRLVRKSPFNAHHRRHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQH 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRI H+PTG+VVQCQ +RSQHKNK QA L+AKLYE + +++ I E++ Sbjct: 255 VNKTESAVRIRHLPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENN 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K IGWG QIRSY L + +KDLRT +E + VLDG LD F++ +L Sbjct: 315 KLNIGWGHQIRSYTLDNSR-IKDLRTGVESKNIQSVLDGGLDLFVECSL 362 >gi|307705242|ref|ZP_07642109.1| peptide chain release factor 2 [Streptococcus mitis SK597] gi|307621191|gb|EFO00261.1| peptide chain release factor 2 [Streptococcus mitis SK597] Length = 325 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 210/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L N + +++++ + ILL+ E D S+ +E + Sbjct: 3 EPDFWNDNIAAQKTSQELNELKNTYNTFQKMEELQDEVEILLDFLAE--DESVHEELVEQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|314933063|ref|ZP_07840429.1| peptide chain release factor 2 [Staphylococcus caprae C87] gi|313654382|gb|EFS18138.1| peptide chain release factor 2 [Staphylococcus caprae C87] Length = 333 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 158/322 (49%), Positives = 219/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ + L + ++ +++ + + D EL EE D + +E + Sbjct: 4 DPDFWNDQSKAQEIIDKNNALKSIVNGYRDLANEVDDMSATRELLQEEYDEDMKEELESD 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + K +++ + + LL G D+N+A E+H GAGGTESQDWA+MLLRMY R+ E+ F Sbjct: 64 VIQFKDKMDQFELQLLLDGPHDANNAIFELHPGAGGTESQDWASMLLRMYQRYCEQNGFN 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERSQ Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+ +L ++E E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQQKLDEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F++A L Sbjct: 303 EETGKVDAVMDGDIGPFIEAYL 324 >gi|145635061|ref|ZP_01790767.1| peptide chain release factor 2 [Haemophilus influenzae PittAA] gi|148826180|ref|YP_001290933.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittEE] gi|145267669|gb|EDK07667.1| peptide chain release factor 2 [Haemophilus influenzae PittAA] gi|148716340|gb|ABQ98550.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittEE] Length = 248 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 193/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGKHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ + Sbjct: 61 SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F Sbjct: 181 LELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|332290838|ref|YP_004429447.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5] gi|332168924|gb|AEE18179.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5] Length = 368 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 155/325 (47%), Positives = 220/325 (67%), Gaps = 2/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 KT DP+ W + EA+ M+ + ++ +E Q + D +L E A E + + + Sbjct: 36 KTFDPNFWNDPKEAEAFMKTLRSKKKWVTDYEEAQTFVEDLEVLYEFAKEGE--APEENV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 D + +E +F ++LS E D L++ AGAGGTES DWA ML+RMY +AEK+ Sbjct: 94 QDRYDKAAAFIEDIEFRNMLSEEGDELSCVLQITAGAGGTESCDWAAMLMRMYLMYAEKQ 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + L +G+ AGIK+ +L I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S Sbjct: 154 GWKVKELNFQEGDVAGIKTVSLEIEGDFAFGWLKGENGVHRLVRISPFDSNAKRHTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP+VDDSIEIEI+ +D I T R+SGAGGQ+VN ++ V++TH PTG+ + C RS Sbjct: 214 VYVYPLVDDSIEIEINPADYDIVTARSSGAGGQNVNKVETKVQLTHHPTGIQISCSDSRS 273 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH N+A+A MLR++LYELEL+K+ E N E+ K I WG QIR+YVL PY++VKD+RT Sbjct: 274 QHDNRAKALQMLRSQLYELELRKQMEARNAIEADKKAIEWGSQIRNYVLHPYKLVKDVRT 333 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDG++D F+K L + Sbjct: 334 AVETGNTDAVLDGNIDLFLKGYLMM 358 >gi|315612838|ref|ZP_07887749.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC 49296] gi|315314948|gb|EFU62989.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC 49296] Length = 329 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 154/326 (47%), Positives = 210/326 (64%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + +++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT+ E V+DGDLD F+ A L Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324 >gi|219849743|ref|YP_002464176.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485] gi|254790911|sp|B8G607|RF2_CHLAD RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|219544002|gb|ACL25740.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485] Length = 367 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 154/342 (45%), Positives = 217/342 (63%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L G D + L + DP LW A+ LM+ L ++ ++ R+ Sbjct: 19 LRGHLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEEVALWNDLDHRMTSL 78 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA +E D S+ + + L+ ++ EV ++ E LLSG D DA+L + AG GGT+ Sbjct: 79 AELIELAEQEGDESLAADLAAELRAVQREVAQRELEILLSGPYDDRDAFLSIQAGMGGTD 138 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMYTRWAE+R + +++ +GEEAGIKSAT+ I+GP AYG+ + E GVHR Sbjct: 139 AQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIRGPYAYGYARAEAGVHR 198 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 L+R+SP+++ R TSF+ + V P VDD+ E+EI D RID +R+ G GGQ VNTTDSA Sbjct: 199 LIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKPEDLRIDVFRSGGHGGQGVNTTDSA 258 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV CQ ERSQ +N+ A +LRA+L E ELQ++ E E +G Sbjct: 259 VRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQAEERARLRGEYREAAFG 318 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Q+R+Y L P +VKD RT+ E ++ VLDG++D F++A L Sbjct: 319 NQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFL 360 >gi|39938959|ref|NP_950725.1| protein chain release factor B [Onion yellows phytoplasma OY-M] gi|39722068|dbj|BAD04558.1| protein chain release factor B [Onion yellows phytoplasma OY-M] Length = 369 Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 164/352 (46%), Positives = 221/352 (62%), Gaps = 5/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L L D Q + LN + W+ +A + ++ L + + ++ + Sbjct: 13 LHQNLQDLKQALDIKKTNQTIEKLNYAMQKEDFWKYPQKAVTISQQFNDLQDKKTTLETL 72 Query: 63 QDRLCDNLILLELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L L + S +L+E NL + + + K F L+ D N+A L Sbjct: 73 KQNYLDLETLFNLNESPNKTSALLEEELKNLTKAVFDFKIKIF---LNQSYDINNAILLF 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW ML RMY ++A+K+ FKTE L+ GE AGIKSATLLIKG AYG+L Sbjct: 130 HPGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQPGEGAGIKSATLLIKGTYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+NS+RHTSF + V P +++ I+I + D +ID +R+SGAGGQ Sbjct: 190 KAEKGVHRLVRISPFDANSKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGE 300 HVNTTDSAVRITH+PTG+VV CQ ERSQ KNK +A ML+ KL++L +K +EE A + Sbjct: 250 HVNTTDSAVRITHLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASKKQKEENAKKFQ 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S + E GWG QIRSYV PY+MVKD RTN E V+DG++D+F+ L Sbjct: 310 SDQKENGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYLT 361 >gi|330828582|ref|YP_004391534.1| peptide chain release factor 2 [Aeromonas veronii B565] gi|328803718|gb|AEB48917.1| Peptide chain release factor 2 [Aeromonas veronii B565] Length = 300 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 153/281 (54%), Positives = 205/281 (72%), Gaps = 1/281 (0%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+ LA+E +D E ++++ ++ +F + SG+ D +D Y+++ +G+GGTE+ Sbjct: 17 MLVSLAVEGEDEETFNEAIAESEQLEAKLVDLEFRRMFSGQHDGSDCYIDIQSGSGGTEA 76 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWANM+LRMY RW + +K E +E +G+ AGIKSAT+ G A+GWL+ E GVHRL Sbjct: 77 QDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGEYAFGWLRTETGVHRL 136 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 137 VRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAV 196 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTGVVVQCQ +RSQHKNK Q L+AKLYELE+QK+ E +K++IGWG Sbjct: 197 RITHVPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEETKSDIGWGS 256 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 257 QIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASL 296 >gi|332522300|ref|ZP_08398552.1| peptide chain release factor 2 [Streptococcus porcinus str. Jelinkova 176] gi|332313564|gb|EGJ26549.1| peptide chain release factor 2 [Streptococcus porcinus str. Jelinkova 176] Length = 327 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 211/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L +++ + + +E+ LEED+ S+ E ++ Sbjct: 3 EPDFWNDTISAQKTSQELNELKVKFDTFHNMENLSEETELYMEM-LEEDE-SVKGELEES 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + FK Sbjct: 61 LLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VETLDYQAGDEAGIKSVTLSFQGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV PY MVKD RTN E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGD+D F+ A L Sbjct: 301 VAQVDKVMDGDIDGFIDAYL 320 >gi|325478551|gb|EGC81663.1| peptide chain release factor 2 [Anaerococcus prevotii ACS-065-V-Col13] Length = 347 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 165/343 (48%), Positives = 231/343 (67%), Gaps = 4/343 (1%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + L K++ P W + A+ M + + + +++D + DN + Sbjct: 4 LFDPARLKDEIEKLEKKSQSPDFWNDSDAAQKTMADLALKKDDLEDYNKLKDGIADNTDM 63 Query: 73 LELA-LEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+L L ED + ++E +L+++ + + ++ LSGE D N+AYL ++AGAGG E+ Sbjct: 64 LDLVELSEDSELKTIEEVEISLKKLDKLAQAMKLKTQLSGEYDKNNAYLSINAGAGGLEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+ML RMYTR+ + R FK + ++++ E GIKS T+ +KG AYG+LKGE+GVHRL Sbjct: 124 TDWADMLFRMYTRYFDDRGFKYDIKDLNNEEAGGIKSVTIHVKGSYAYGYLKGEKGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS SRRHTSFSS+ ++P +DD I+I+I SD RIDTYRASGAGGQHVN TDSAV Sbjct: 184 VRISPFDSQSRRHTSFSSVDIFPELDDDIQIDIDPSDLRIDTYRASGAGGQHVNKTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG 309 RITHIPTGVV Q ERSQ +N+ A N+L +KL ++ E ++RE+I +I + ++I WG Sbjct: 244 RITHIPTGVVATSQAERSQIQNRQTAMNLLMSKLVQIKEEEQREKIEDI-QGKYSQIAWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV QPY MVKD RTN E + V+DG++ F+ A LA Sbjct: 303 SQIRSYVFQPYTMVKDHRTNFEMGNVESVMDGNIQGFIDAYLA 345 >gi|307332073|ref|ZP_07611163.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu 4113] gi|306882296|gb|EFN13392.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu 4113] Length = 830 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 163/355 (45%), Positives = 226/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + +L + +E+ Sbjct: 473 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 532 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D E L+ ++ V+ + +LLSGE DS +A + V Sbjct: 533 RGRIDDLEVLFELAADEGDADARAEAESELEAVRKAVDEMEVRTLLSGEYDSREALVNVR 592 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KT+ E EEAGIKS T ++ P AYG L Sbjct: 593 AEAGGVDAADFAEQLQRMYLRWAERHGYKTQIYETSYAEEAGIKSTTFAVQIPYAYGTLS 652 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 653 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 712 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 713 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKM-DAL 769 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 770 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 824 >gi|307706955|ref|ZP_07643754.1| peptide chain release factor 2 [Streptococcus mitis SK321] gi|307617669|gb|EFN96837.1| peptide chain release factor 2 [Streptococcus mitis SK321] Length = 325 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 209/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L N + ++++ + ILL+ E D S+ +E + Sbjct: 3 EPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHEELVEQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|170017955|ref|YP_001728874.1| peptide chain release factor 2 [Leuconostoc citreum KM20] gi|238688939|sp|B1MW26|RF2_LEUCK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|169804812|gb|ACA83430.1| Peptide chain release factor 2 [Leuconostoc citreum KM20] Length = 372 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 152/341 (44%), Positives = 217/341 (63%), Gaps = 1/341 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 G D + + ++ + +P W + +A+ ++ E L N + ++ + + Sbjct: 22 GTLDLEALTEEIADFENRMTEPGFWDDNTKAQKVIEENNVLKNRRDSFLNLTNQAEEIEV 81 Query: 72 LLE-LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L++ LA + D E +D++ + + +VE E LL+ D+N+A LEVH G+GGTES Sbjct: 82 LIDMLAEDPGDVDTATELADSIAQAQKDVEAYNLEQLLTEPYDANNAILEVHPGSGGTES 141 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW L RMYTRWA++ F+ + L+ H G+EAGI SAT+ I G NA+G+L+ E+GVHR Sbjct: 142 TDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLRSEKGVHRF 201 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS RRHTSF S+ V P +DD+IE+E+ + D ++D +R+ GAGGQ+VN + V Sbjct: 202 VRISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGV 261 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+VV ER+Q+ N+ A +L++KLY+LEL+K+E K E GWG Sbjct: 262 RLTHEPTGIVVSSTVERTQYGNRDYAMKLLKSKLYQLELEKQEAERAALTGEKMENGWGS 321 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L Sbjct: 322 QIRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYL 362 >gi|296436914|gb|ADH19084.1| peptide chain release factor 2 [Chlamydia trachomatis G/11222] Length = 334 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 159/323 (49%), Positives = 211/323 (65%), Gaps = 9/323 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V+ A + L +S E+++++ ++ LE+++ S E L++ Sbjct: 10 FWDDVVRAGKISERIARLKQQLSEFNELKNKVS----AIQFFLEDEESSKDLEMQKELEK 65 Query: 95 IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + E K E LLSGE D N +L ++AGAGGTES DW MLLRMY RWA + Sbjct: 66 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +D+ IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ Sbjct: 186 VFPEIDNKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 245 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+RT Sbjct: 246 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 305 Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352 E + ++DG+ LD F+KA L Sbjct: 306 EVGNIQAMMDGELLDAFIKAYLV 328 >gi|291167022|gb|EFE29068.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896] Length = 338 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 157/329 (47%), Positives = 221/329 (67%), Gaps = 6/329 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K ED W N+ ++ +++ + L+ + L + IL EL E D + +E Sbjct: 11 KMEDADFWNNLELSQHIVKRNKELERTLDIYSSAFSELEEVEILFELTKE--DSELEKEL 68 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + ++E + ++LL GE D N+A L +HAG+GG ++QDWA MLLRMY R+ Sbjct: 69 EQCINELSEKMEQLKIQTLLDGEYDGNNAILSIHAGSGGLDAQDWAQMLLRMYLRFCHDM 128 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 ++ L+ EAGIKS TL I+GPNAYG+LK E+GVHR+VRISP+DS+ +RHTSF+S Sbjct: 129 GYRVIELDSLSDSEAGIKSVTLQIEGPNAYGFLKSEKGVHRIVRISPFDSSGKRHTSFTS 188 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +DD++E++I +D +IDTYRASGAGGQHVN TDSAVRITHIPTG+V+ CQ ERS Sbjct: 189 VDVIPEMDDTVEVDIDTNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGIVITCQNERS 248 Query: 269 QHKNKAQAWNMLRAKLYELELQK-REEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDL 326 QH N+ A ML +KL ++++++ +E+I +I GE S +I WG QIRSYV QPY +VKD Sbjct: 249 QHSNRETAMKMLFSKLMDIKIREHKEKIEDISGEYS--QIAWGSQIRSYVFQPYTLVKDH 306 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E S V+DG++ F+ A L +K Sbjct: 307 RTNHEIGSVQSVMDGNIMPFINAYLKQQK 335 >gi|182419781|ref|ZP_02951021.1| peptide chain release factor 2 [Clostridium butyricum 5521] gi|237666525|ref|ZP_04526510.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376329|gb|EDT73911.1| peptide chain release factor 2 [Clostridium butyricum 5521] gi|237657724|gb|EEP55279.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 347 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 154/339 (45%), Positives = 224/339 (66%), Gaps = 3/339 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD + L L K ++P W + +A+ + ++ + + + I +++ +L D++ +L Sbjct: 7 FDRAGLEKELHELECKMQEPGFWDDSKKAEEVTKKSKLIKDKIENYDKLKSQL-DDIDVL 65 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + +EEDD E ++ I+ E+E + LLSGE D N+A + +H G GGT++ DW Sbjct: 66 KDIMEEDDIESANEIIQTIKSIEHEIEDYNMKILLSGEYDKNNAIVTLHVGVGGTDANDW 125 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 MLLRMYTRW E + + E +++ G+EAGIKS TL + G YG+LK E+G+HRLVRI Sbjct: 126 TEMLLRMYTRWCENKGYSVETIDLIAGDEAGIKSVTLKVTGEYVYGYLKAEKGIHRLVRI 185 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY++N +R TSF+S+ V P + +I I D ++DTYR+SG+GGQH+N TDSAVRIT Sbjct: 186 SPYNANGKRQTSFASMEVLPELTKEQDITIRPDDLKVDTYRSSGSGGQHINKTDSAVRIT 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+VVQCQ ERSQ N+ A ML++KL EL E +E+I ++ K ++GWG QI Sbjct: 246 HIPTGIVVQCQNERSQFSNRETAMEMLKSKLVELKERAHKEKIEDLTGELK-DMGWGSQI 304 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYV PY MVKD RTN+E ++ + V+DGD+D F+ A L Sbjct: 305 RSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDLFINAFL 343 >gi|284040585|ref|YP_003390515.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74] gi|283819878|gb|ADB41716.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74] Length = 358 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 156/349 (44%), Positives = 230/349 (65%), Gaps = 3/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D+DN ++L+ L +T P W + A+ +M++ + L + +++ Sbjct: 9 LRARVEALRGYLDYDNKKEQLAELEQQTFQPEFWTDAARAEGVMKQVRGLKGWTTGYEKL 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E E +E + +++ +E + + +L E D A LE++ Sbjct: 69 NSQFGDLETLFEFY--EAGDVTEEEVDEEGRKVTTTLEELELKKMLGNEEDQLSAVLEIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA+ML RMY RWAEK + + ++ +G+ AGIKSAT+ + GP AYG+LK Sbjct: 127 AGAGGTESQDWADMLYRMYMRWAEKHGYGLKQVDYQEGDTAGIKSATIEVDGPLAYGFLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S++ YP++DD+I IE++ +D DT+R+ GAGGQ+ Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFASVYAYPLIDDTINIEVNPADIDWDTFRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H P+G++++CQQERSQ +NK A +L++KLYE+E+QKR E+S Sbjct: 247 VNKVETAVRLKHKPSGLIIECQQERSQLQNKEVAIRLLKSKLYEIEVQKRNAARAEVEAS 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYVL + VKD RT + ++ VLDGDLD F+KA L Sbjct: 307 KQKIEWGSQIRSYVLDD-RRVKDHRTGYQTSNTEAVLDGDLDPFIKAFL 354 >gi|319401169|gb|EFV89384.1| peptide chain release factor 2 [Staphylococcus epidermidis FRI909] Length = 332 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 161/322 (50%), Positives = 223/322 (69%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ + L + +S ++ + + D EL EE D + +E + Sbjct: 3 DPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELEEE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ FK Sbjct: 63 VQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQNGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 123 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++E E+A I + +IGWG QIRSYV PY MVKD RTN Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQEQEMAEI-RGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 301 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DG++ F++A L Sbjct: 302 EETGKVDAVMDGEIGPFIEAYL 323 >gi|302380960|ref|ZP_07269421.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3] gi|302311181|gb|EFK93201.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3] Length = 329 Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 149/282 (52%), Positives = 201/282 (71%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++LE++ E++ +E S L+ ++ V+ + ++LL GE D N+A + +HAGAGGTE+ Sbjct: 46 MMLEISKEDNTEEYEKEISKTLKNLEKNVDEFKIQTLLVGEYDRNNAIMSIHAGAGGTEA 105 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW +K+ + + + E GIKS +L+++G NAYG+LK E+GVHRL Sbjct: 106 QDWAEMLLRMYTRWIADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRL 165 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D RRHTSF+S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAV Sbjct: 166 VRISPFDQQKRRHTSFASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAV 225 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTGV VQCQ ERSQ N+ A +ML AKL ++ +++ E + +I WG Sbjct: 226 RITHIPTGVTVQCQTERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGS 285 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV QPY +VKD RTN E + DVLDGDLD F+ A L+ Sbjct: 286 QIRSYVFQPYTLVKDHRTNCESSQVQDVLDGDLDKFINAYLS 327 >gi|166154673|ref|YP_001654791.1| peptide chain release factor 2 [Chlamydia trachomatis 434/Bu] gi|238687385|sp|B0B832|RF2_CHLT2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|165930661|emb|CAP04158.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis 434/Bu] Length = 368 Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 159/323 (49%), Positives = 210/323 (65%), Gaps = 9/323 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V A + L +S E+++++ ++ LE+++ S E L++ Sbjct: 44 FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 99 Query: 95 IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + E K E LLSGE D N +L ++AGAGGTES DW M+LRMY RWA + Sbjct: 100 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 159 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ Sbjct: 160 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 219 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ Sbjct: 220 VFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 279 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+RT Sbjct: 280 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 339 Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352 E + ++DG+ LD F+KA L Sbjct: 340 EVGNIQAMMDGELLDAFIKAYLV 362 >gi|166155548|ref|YP_001653803.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|238687484|sp|B0BC97|RF2_CHLTB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|165931536|emb|CAP07112.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 368 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 159/323 (49%), Positives = 210/323 (65%), Gaps = 9/323 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V A + L +S E+++++ ++ LE+++ S E L++ Sbjct: 44 FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 99 Query: 95 IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + E K E LLSGE D N +L ++AGAGGTES DW M+LRMY RWA + Sbjct: 100 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 159 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ Sbjct: 160 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 219 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ Sbjct: 220 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 279 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+RT Sbjct: 280 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 339 Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352 E + ++DG+ LD F+KA L Sbjct: 340 EVGNIQAMMDGELLDAFIKAYLV 362 >gi|322376937|ref|ZP_08051430.1| peptide chain release factor 2 [Streptococcus sp. M334] gi|321282744|gb|EFX59751.1| peptide chain release factor 2 [Streptococcus sp. M334] Length = 329 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 154/326 (47%), Positives = 209/326 (64%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVQ 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 EELVTQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT+ E V+DGDLD F+ A L Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324 >gi|302865524|ref|YP_003834161.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC 27029] gi|315502072|ref|YP_004080959.1| peptide chain release factor 2 [Micromonospora sp. L5] gi|302568383|gb|ADL44585.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC 27029] gi|315408691|gb|ADU06808.1| peptide chain release factor 2 [Micromonospora sp. L5] Length = 373 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 158/354 (44%), Positives = 224/354 (63%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ + L + P LW + +A+ + + +++ I+ + ++ Sbjct: 13 LDATLRNIEAVLDLDKLREQKARLEQEASAPDLWDDQAKAQQVTSQLSYVNGEITKLGDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +LLELA EDD L E + + ++ + +LLSGE DS +A + + Sbjct: 73 RSRLDDAGVLLELAQAEDDPGALTEVESEITGLTKAIQEMEVRTLLSGEYDSREALVAIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PV + + I+I E++ R+D YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+A+L ++ E++A + Sbjct: 253 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQARLLERKRQEEEEKLAGLKTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 S + WG Q+RSYVL PYQMVKDLRT E +PS V DGDLD F++A + +K Sbjct: 313 STS--SWGDQMRSYVLHPYQMVKDLRTEQETGNPSSVFDGDLDSFIEAGIRWRK 364 >gi|288575018|ref|ZP_06393375.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570759|gb|EFC92316.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 336 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 160/323 (49%), Positives = 210/323 (65%), Gaps = 2/323 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W +A+ + + L++ IS + D ++L EL EEDD + E Sbjct: 15 PDFWGR-DDAQRISTDLARLESRISSWDRMSSEYQDLVVLAELLDEEDDQELEAEFFSRS 73 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + ++ E LL+G+ D N+A + VHAG+GG +SQDWA ML RMY RW E +KT Sbjct: 74 ESLSKSMDAFSMELLLNGDYDGNNAIMTVHAGSGGLDSQDWAEMLYRMYLRWCESNHYKT 133 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 + L+ EE GIK+ TLL++G AYG+L+ E GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 134 KILDYQRDEEGGIKTVTLLVEGDFAYGYLQSEVGVHRLVRISPFDTAKRRHTSFASVDVA 193 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P + D +E++I D RIDT+RASGAGGQHVN TDSAVRITHIPTG+VV CQ ERSQH N Sbjct: 194 PELPDDVEVDIRTEDLRIDTFRASGAGGQHVNMTDSAVRITHIPTGIVVSCQNERSQHMN 253 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 KA A +LR KLYE + +R++ + K EI WG QIRSYVL PY MVKD RT E Sbjct: 254 KAVAMQVLRGKLYERSMSERQDTLD-SLHDKKEISWGNQIRSYVLHPYTMVKDHRTGEET 312 Query: 333 TSPSDVLDGDLDDFMKATLAIKK 355 + + VLDGDL+ F+ + L +K Sbjct: 313 GNAAAVLDGDLERFILSYLRWRK 335 >gi|221134749|ref|ZP_03561052.1| Protein chain release factor B, RF-2 [Glaciecola sp. HTCC2999] Length = 248 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 150/245 (61%), Positives = 191/245 (77%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + + D ND YL++ +G+GGTE+QDWANMLLRMY RW E+ FKTE +E+ DG+ AGIK Sbjct: 1 MFAKPNDGNDCYLDIQSGSGGTEAQDWANMLLRMYLRWGEENGFKTELIEVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ G A+GWL+ E GVHRLVR SP+DS +RRHTSF+S ++YP ++D I+I+I+ S Sbjct: 61 SATIRFGGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASAFIYPEINDDIDIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQHVN TDSAVRITH+PT +VVQCQ +RSQHKNK QA+ L+AKLYE Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E E SK++IGWG QIRSYVL + +KDLRT +E + VLDG+L+ F Sbjct: 181 YELQKQNEEKQAMEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGNLNKF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|330686486|gb|EGG98080.1| putative peptide chain release factor 2 [Staphylococcus epidermidis VCU121] Length = 271 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 152/264 (57%), Positives = 195/264 (73%), Gaps = 3/264 (1%) Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +N+ K E+++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ Sbjct: 3 NNVIEFKSEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQSG 62 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 63 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 122 Query: 210 WVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P D D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 123 DVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 182 Query: 269 QHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 Q KN+ A ML++KLY+L+L+++E E+A I + EIGWG QIRSYV PY MVKD R Sbjct: 183 QIKNREAAMKMLKSKLYQLKLEEQEREMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHR 241 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 TN E V+DGD+ F++A L Sbjct: 242 TNEETGKVDAVMDGDIGPFIEAYL 265 >gi|322392321|ref|ZP_08065782.1| peptide chain release factor RF2 [Streptococcus peroris ATCC 700780] gi|321144856|gb|EFX40256.1| peptide chain release factor RF2 [Streptococcus peroris ATCC 700780] Length = 325 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 156/323 (48%), Positives = 208/323 (64%), Gaps = 8/323 (2%) Query: 32 DPHLWQNVIEAKML---MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P W + I A+ + E +H N + E+QD + ILL+ E D S+ E Sbjct: 3 EPDFWNDNIAAQKTSQELNELKHTYNTFHKMDELQDEVE---ILLDFLAE--DESVKDEL 57 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 58 VEKLDELAQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAK 117 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S Sbjct: 118 GFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTS 177 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+ Sbjct: 178 VEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRT 237 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT Sbjct: 238 QYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRT 297 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 N E V+DGDLD F+ A L Sbjct: 298 NFEVAQVDKVMDGDLDGFIDAYL 320 >gi|242242124|ref|ZP_04796569.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144] gi|242234437|gb|EES36749.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144] Length = 332 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 161/322 (50%), Positives = 222/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ + L + +S ++ + + D EL EE D + +E + Sbjct: 3 DPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELEEE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDWA MLLRMY R+ E+ FK Sbjct: 63 VQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWAGMLLRMYQRYCEQNGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 123 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++E E+A I + +IGWG QIRSYV PY MVKD RTN Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQEQEMAEI-RGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 301 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DG++ F++A L Sbjct: 302 EETGKVDAVMDGEIGPFIEAYL 323 >gi|301335943|ref|ZP_07224187.1| peptide chain release factor 2 [Chlamydia trachomatis L2tet1] Length = 334 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 159/323 (49%), Positives = 210/323 (65%), Gaps = 9/323 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V A + L +S E+++++ ++ LE+++ S E L++ Sbjct: 10 FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 65 Query: 95 IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + E K E LLSGE D N +L ++AGAGGTES DW M+LRMY RWA + Sbjct: 66 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 125 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ Sbjct: 126 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ Sbjct: 186 VFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 245 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+RT Sbjct: 246 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 305 Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352 E + ++DG+ LD F+KA L Sbjct: 306 EVGNIQAMMDGELLDAFIKAYLV 328 >gi|289525504|emb|CBJ14981.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis Sweden2] Length = 368 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 160/323 (49%), Positives = 209/323 (64%), Gaps = 9/323 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V A + L +S E+++++ ++ LE+++ S E L++ Sbjct: 44 FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 99 Query: 95 IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + E K E LLSGE D N +L ++AGAGGTES DW MLLRMY RWA + Sbjct: 100 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 159 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF S+ Sbjct: 160 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFVSVE 219 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ Sbjct: 220 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 279 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+RT Sbjct: 280 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 339 Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352 E + ++DG+ LD F+KA L Sbjct: 340 EVGNIQAMMDGELLDAFIKAYLV 362 >gi|303235160|ref|ZP_07321780.1| peptide chain release factor 2 [Finegoldia magna BVS033A4] gi|302493752|gb|EFL53538.1| peptide chain release factor 2 [Finegoldia magna BVS033A4] Length = 329 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 149/282 (52%), Positives = 201/282 (71%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++LE++ E++ +E S L+ ++ V+ + ++LL GE D N+A + +HAGAGGTE+ Sbjct: 46 MMLEISKEDNTEEYEKEISKTLKNLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEA 105 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW +K+ + + + E GIKS +L+++G NAYG+LK E+GVHRL Sbjct: 106 QDWAEMLLRMYTRWIADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRL 165 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D RRHTSF+S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAV Sbjct: 166 VRISPFDQQKRRHTSFASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAV 225 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTGV VQCQ ERSQ N+ A +ML AKL ++ +++ E + +I WG Sbjct: 226 RITHIPTGVTVQCQTERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGS 285 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV QPY +VKD RTN E + DVLDGDLD F+ A L+ Sbjct: 286 QIRSYVFQPYTLVKDHRTNCESSQVQDVLDGDLDKFINAYLS 327 >gi|197294594|ref|YP_001799135.1| Protein chain release factor B [Candidatus Phytoplasma australiense] gi|171853921|emb|CAM11884.1| Protein chain release factor B [Candidatus Phytoplasma australiense] Length = 370 Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 158/352 (44%), Positives = 228/352 (64%), Gaps = 5/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ L L + + Q L+ +N + W + +A ++ L I+ +K + Sbjct: 13 IAQNLRDLKEAINLSQSYQTLNQINELMQKKDFWDDPKKAVATSQKFNDLQEKINTLKHL 72 Query: 63 QDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D + L+L + + ++ + L+E L L + K F L+ D+N+A L Sbjct: 73 ETNHQDLVTFLDLESNQNNETAFLEEEIKKLIDAVLNFKIKVF---LNQPYDNNNAILIF 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW ML RMY ++A+K+ FKTE L+ GEEAGIKSATLL+KG AYG+L Sbjct: 130 HPGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQSGEEAGIKSATLLVKGAYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVR+SP+D+N++RHTSF S V P + + I+I++ + D + D +R+SGAGGQ Sbjct: 190 KAEKGVHRLVRVSPFDTNAKRHTSFVSCDVLPEIKEKIKIDLRQEDLKFDFFRSSGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGE 300 HVNTTDSAVRITH+PTG+VV CQ ERSQ++N+ +A ML+ KL++L + +++EE A + Sbjct: 250 HVNTTDSAVRITHLPTGLVVSCQNERSQNQNREKALQMLKIKLFQLADKKQKEEHAKNFQ 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + EIGWG QIRSYV PY+MVKD RTN E V+DG++D F+ L Sbjct: 310 GEQKEIGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDVFINGYLT 361 >gi|306833909|ref|ZP_07467033.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338] gi|304423910|gb|EFM27052.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338] Length = 325 Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 211/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L E+Q+ + + LE+ L+EDD S+ E ++ Sbjct: 3 EPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEM-LDEDD-SVQAELEES 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + FK Sbjct: 61 LEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSFSS+ V Sbjct: 121 VETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFSSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RT E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGD+D F+ A L Sbjct: 301 IAQVDKVMDGDIDGFIDAYL 320 >gi|313207347|ref|YP_004046524.1| bacterial peptide chain release factor 2 (brf-2) [Riemerella anatipestifer DSM 15868] gi|312446663|gb|ADQ83018.1| bacterial peptide chain release factor 2 (bRF-2) [Riemerella anatipestifer DSM 15868] gi|315023242|gb|EFT36252.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM] gi|325335194|gb|ADZ11468.1| Protein chain release factor B [Riemerella anatipestifer RA-GD] Length = 376 Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 148/323 (45%), Positives = 223/323 (69%), Gaps = 2/323 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 KT P W N EA++ +++ + + +EI L D +L+E A E+ D + QE Sbjct: 42 KTAAPEFWDNPKEAEVFLKQLRSKKKWVEDYEEIHTGLEDLQVLIEFAKEDPDSA--QEL 99 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + +VE +F+++LS E D A L++ AGAGGTES DWA+ML+RMY WA+K Sbjct: 100 ETAYPTLLEKVENLEFKNMLSNEGDELSAVLQITAGAGGTESCDWASMLMRMYLMWADKN 159 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + L +G+ AG+K+ TL I+G A+G+LKGE GVHRLVRISP+DSN++RHTSF+S Sbjct: 160 GYKVKELNFQEGDVAGVKTVTLEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFAS 219 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP+VDDSIEI I+ +D +T RASGAGGQ+VN ++AVR+ H PTG++++ + RS Sbjct: 220 VYVYPLVDDSIEININPADISFETMRASGAGGQNVNKVETAVRLRHAPTGIIIENSESRS 279 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +NK +A +L+++LYE+EL++R N E++K +I WG QIR+YV+ PY++VKD+R+ Sbjct: 280 QLQNKEKALQLLKSRLYEIELEERMRARNEIEANKMKIEWGSQIRNYVMHPYKLVKDVRS 339 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 E + V++G++ F+KA L Sbjct: 340 GHETSDVDAVMNGEITPFLKAYL 362 >gi|306820781|ref|ZP_07454406.1| peptide chain release factor RF2 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551171|gb|EFM39137.1| peptide chain release factor RF2 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 316 Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 154/297 (51%), Positives = 210/297 (70%), Gaps = 10/297 (3%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++++ D L+L + A + D S +E S DNL++I + +L+G+ D+N+A Sbjct: 24 VKNKFEDILVLFDFASQ--DSSFEEELSKETDNLEKI---TDSLSISIMLNGQYDANNAI 78 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L VH+G GG ++QDW MLLRMYTR+A FK +++ +++G+KSATL I G NAY Sbjct: 79 LSVHSGTGGLDAQDWTQMLLRMYTRFASNMGFKISYIDLQQDDQSGVKSATLKIDGENAY 138 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+LK E+GVHRLVRISP+DS+ +RHTSF+S+ V P +DDSI++EI+ D ++DTYR+SGA Sbjct: 139 GYLKCEKGVHRLVRISPFDSSGKRHTSFASVDVLPELDDSIKVEINPKDLKVDTYRSSGA 198 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIAN 297 GGQHVN T+SA+RITHIPTGVVVQCQ ERSQ N+ A ML AKL EL EL+ +++I + Sbjct: 199 GGQHVNKTESAIRITHIPTGVVVQCQNERSQISNRETAMKMLTAKLIELKELEHKDKIED 258 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I + ++I WG QIRSYV QPY MVKD RTN E + V+DGD+ F+ A L K Sbjct: 259 I-QGKYSQIAWGSQIRSYVFQPYTMVKDHRTNYEVGNIGSVMDGDIMPFINAYLVNK 314 >gi|15672953|ref|NP_267127.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis Il1403] gi|281491474|ref|YP_003353454.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis KF147] gi|24638157|sp|Q9CGX1|RF2_LACLA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|12723911|gb|AAK05069.1|AE006331_9 peptide chain release factor 2 [Lactococcus lactis subsp. lactis Il1403] gi|281375192|gb|ADA64705.1| Peptide chain release factor 2 (RF-2) [Lactococcus lactis subsp. lactis KF147] gi|326406515|gb|ADZ63586.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis CV56] Length = 365 Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 148/348 (42%), Positives = 221/348 (63%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + ++N D + + ++ L P W + A+ ++ E L + + Sbjct: 14 AEKINGFRESLDLERLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + L + +LE+ EE D + E + + ++E + E +L+ D +A LE+H Sbjct: 74 NMLEEAQTMLEMLQEEADEEMQAELEEMTIALGQKIESYELEIMLNQPYDHMNAVLEIHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTESQDW +ML+RMYTRW E FK E L+ DG+ AG+KS L G NAYG+L+G Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVALRFVGRNAYGFLRG 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+++ ++D ++DT+R+ GAGGQ+V Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVDVRDADVKMDTFRSGGAGGQNV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+THIPTG+VVQ +R+Q+ N+ +A ML++KLY+LE+ K++ + + Sbjct: 254 NKVSTGVRLTHIPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +EI WG QIRSYV PYQ+VKD RT E S+V+DG+LD F+ A L Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGELDGFINAYL 361 >gi|255348832|ref|ZP_05380839.1| peptide chain release factor 2 [Chlamydia trachomatis 70] gi|255503372|ref|ZP_05381762.1| peptide chain release factor 2 [Chlamydia trachomatis 70s] gi|255507050|ref|ZP_05382689.1| peptide chain release factor 2 [Chlamydia trachomatis D(s)2923] gi|296435060|gb|ADH17238.1| peptide chain release factor 2 [Chlamydia trachomatis E/150] gi|296438780|gb|ADH20933.1| peptide chain release factor 2 [Chlamydia trachomatis E/11023] Length = 334 Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 160/323 (49%), Positives = 209/323 (64%), Gaps = 9/323 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V A + L +S E+++++ ++ LE+++ S E L++ Sbjct: 10 FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 65 Query: 95 IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + E K E LLSGE D N +L ++AGAGGTES DW MLLRMY RWA + Sbjct: 66 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF S+ Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFVSVE 185 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ Sbjct: 186 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 245 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+RT Sbjct: 246 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 305 Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352 E + ++DG+ LD F+KA L Sbjct: 306 EVGNIQAMMDGELLDAFIKAYLV 328 >gi|329767964|ref|ZP_08259475.1| peptide chain release factor 2 [Gemella haemolysans M341] gi|328838449|gb|EGF88057.1| peptide chain release factor 2 [Gemella haemolysans M341] Length = 372 Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 160/333 (48%), Positives = 219/333 (65%), Gaps = 3/333 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QR++ + + W + A +L+ E + + + E+ D L + ++E +ED Sbjct: 31 QRVAEIENMMLEADFWNDSETASLLVTESKSIKKELDEFSEMIDYLEHSEEMVEFLKDED 90 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D I Q+ + + +K VE F L S E D+N A LE+HAGAGGT++ DW+ ++LRM Sbjct: 91 DEEIYQDLLETVVNLKSSVEDFSFRLLFSEEYDNNTAILEIHAGAGGTDATDWSELMLRM 150 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R+ K+ K L G+ G+KSAT+ ++G AYG LKGE+GVHR+VRISP+D + Sbjct: 151 YERFFTKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLLKGEKGVHRVVRISPFDPSG 210 Query: 201 RRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 +RHTSF+SI V P DD I IEI+ D +IDTYRA GAGGQH+NTTDSAVRITH+PTG+ Sbjct: 211 KRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGGQHINTTDSAVRITHLPTGI 270 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQ 318 VVQ Q ERSQ KNK A L++KLY+LE++++E E+A I K +IGWG QIRSYV Sbjct: 271 VVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKERELAAIRGEQK-DIGWGSQIRSYVFT 329 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY MVKD RTN E ++ V+DG++ DF+ A L Sbjct: 330 PYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362 >gi|300781771|ref|ZP_07091625.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC 33030] gi|300533478|gb|EFK54539.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC 33030] Length = 364 Score = 305 bits (780), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 159/350 (45%), Positives = 220/350 (62%), Gaps = 6/350 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L + + D D R L + DP LW + A+ + E + + ++ + Sbjct: 12 LEQTLTTIEKVMDLDEMDARARELEQQAADPSLWDDPEHAQSVTTELSSVQARVRRVRSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ ELA EE D ++ + D L + VE + ++LSGE D +A + + Sbjct: 72 RQRIDDLPVMYELAAEEGDYTLAE---DELADLTTAVETLEVTTMLSGEYDQREAVVNIR 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 129 SGAGGVDAADWAEMLMRMYIRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I +S+ RID YR+SG GGQ Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIPDSEIRIDVYRSSGPGGQS 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301 VNTTDSAVRITH PTG+VV CQ E+SQ +NKA A N+L++KL LE +++EE A + Sbjct: 249 VNTTDSAVRITHEPTGIVVTCQNEKSQIQNKASAMNVLQSKL--LERKRQEEKAELDALG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D F+++ + Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGI 356 >gi|169825227|ref|YP_001692838.1| peptide chain release factor B [Finegoldia magna ATCC 29328] gi|167832032|dbj|BAG08948.1| peptide chain release factor B [Finegoldia magna ATCC 29328] Length = 324 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 149/282 (52%), Positives = 201/282 (71%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++LE++ E++ +E S L+ ++ V+ + ++LL GE D N+A + +HAGAGGTE+ Sbjct: 41 MMLEISKEDNTEEYEKEISKTLKNLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEA 100 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW +K+ + + + E GIKS +L+++G NAYG+LK E+GVHRL Sbjct: 101 QDWAEMLLRMYTRWIADKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRL 160 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D RRHTSF+S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAV Sbjct: 161 VRISPFDQQKRRHTSFASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAV 220 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTGV VQCQ ERSQ N+ A +ML AKL ++ +++ E + +I WG Sbjct: 221 RITHIPTGVTVQCQTERSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGS 280 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV QPY +VKD RTN E + DVLDGDLD F+ A L+ Sbjct: 281 QIRSYVFQPYTLVKDHRTNCESSQVQDVLDGDLDKFINAYLS 322 >gi|145593537|ref|YP_001157834.1| peptide chain release factor 2 [Salinispora tropica CNB-440] gi|189040004|sp|A4X3K6|RF2_SALTO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|145302874|gb|ABP53456.1| bacterial peptide chain release factor 2 (bRF-2) [Salinispora tropica CNB-440] Length = 373 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 156/324 (48%), Positives = 213/324 (65%), Gaps = 3/324 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P LW + A+ + + +++ I+ + E++ RL D +LLELA E D L E + Sbjct: 43 PDLWDDQARAQQVTSQLSYVNGEINKLAELRSRLDDAKVLLELAEAESDPGALTEVEAEV 102 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + ++ + +LLSGE DS +A + + AGAGG ++ D+A MLLRMY RWAE+ + T Sbjct: 103 AGLAKAIDEMEVRTLLSGEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPT 162 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E E EEAG+KSAT +K P AYG L E G HRLVRISP+D+ RR TSF+ + V Sbjct: 163 EVYETSYAEEAGLKSATFTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVL 222 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 PVV+ + I+I E++ R D YR+SG GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ +N Sbjct: 223 PVVEQTDHIDIPENEMRFDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQN 282 Query: 273 KAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 KA A +L+A+L LE +++EE A + G + WG Q+RSYVL PYQMVKDLRT E Sbjct: 283 KASALRVLQARL--LERKRQEEQAKLQGLKTDAAGSWGDQMRSYVLHPYQMVKDLRTEQE 340 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 +P+ V DG+LD F++A + +K Sbjct: 341 TGTPAAVFDGELDAFIEAGIRWRK 364 >gi|332525328|ref|ZP_08401493.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2] gi|332108602|gb|EGJ09826.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2] Length = 248 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 143/245 (58%), Positives = 192/245 (78%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + + AD ++ ++++ AGAGGTE+ DWA+MLLR Y ++ EK+ FK E +E +G+ AGI+ Sbjct: 1 MFANPADPSNCFIDIQAGAGGTEACDWASMLLRQYLKYCEKKGFKAEVMEETEGDVAGIR 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SATL I+G A+G L+ E GVHRLVR SP+DS RHTSF+S++VYP VDDSIEIEI+ + Sbjct: 61 SATLKIEGDYAFGHLRTETGVHRLVRKSPFDSAGGRHTSFASLFVYPEVDDSIEIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW MLR++LYE Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWAMLRSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++K+ E E SKT++GWG QIRSYVL + +KDLRT +E ++ VLDGDLD F Sbjct: 181 HEMRKQMEAQQKLEDSKTDVGWGHQIRSYVLDQSR-IKDLRTGVEISNTQKVLDGDLDPF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|331266735|ref|YP_004326365.1| peptide chain release factor 2 [Streptococcus oralis Uo5] gi|326683407|emb|CBZ01025.1| peptide chain release factor 2 [Streptococcus oralis Uo5] Length = 325 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L N + +++++ + ILL+ E D S+ E + Sbjct: 3 EPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVHDELVEQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|189499218|ref|YP_001958688.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1] gi|189494659|gb|ACE03207.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1] Length = 363 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 156/347 (44%), Positives = 229/347 (65%), Gaps = 3/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIKEIQDR 65 LN GG+FD D + ++ L T + + W+N EA +++E H F+ ++ + Sbjct: 15 LNSYGGIFDVDERLHKIGELEQITTEENFWENQQEANKIVKEINDHKLWTEGFLA-LEKQ 73 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 D LE+A E + S+ +E + I+ ++ +F+++LSG+ D +A L ++AGA Sbjct: 74 TADLREELEIAEELGEESLAEEIDSRIGSIEQKIAEIEFKNMLSGKDDPGNALLTINAGA 133 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK E Sbjct: 134 GGTEAQDWAEMLYRMYLRWAERKGFKIFTDDYQEGDGAGIKTATLEIQGPYAYGYLKAEN 193 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR+SP+DSN+RRHTSF+S++ YP EIEI + D + T+R+ G GGQ+VN Sbjct: 194 GVHRLVRVSPFDSNARRHTSFASVYSYPEAPPDAEIEIRKEDLELSTFRSGGKGGQNVNK 253 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 ++AVRI HIP+G+VV CQQERSQ +N+ +A MLRA+LY+ + ++ E E +K + Sbjct: 254 VETAVRIKHIPSGIVVSCQQERSQFQNRERATKMLRAQLYKKQREEEEARKQAVEGTKKK 313 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 I WG QIRSYV+ + +KD RTN E+ +VLDGD+DDF++ L+ Sbjct: 314 IEWGSQIRSYVMDD-RRIKDHRTNYERHDIENVLDGDIDDFIEKYLS 359 >gi|313889933|ref|ZP_07823573.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN 20026] gi|313121699|gb|EFR44798.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN 20026] Length = 327 Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 210/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L +++ + + +E+ LEED+ S+ E ++ Sbjct: 3 EPDFWNDTIAAQKTSQELNELKVKFDTFHNMENLSEETELYMEM-LEEDE-SVKGELEES 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + FK Sbjct: 61 LLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E K+ E N + K EI WG QIRSYV PY MVKD RTN E Sbjct: 241 NRDRAMKMLQAKLYQMEQDKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGD+D F+ A L Sbjct: 301 VAQVDKVMDGDIDGFIDAYL 320 >gi|294102045|ref|YP_003553903.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM 12261] gi|293617025|gb|ADE57179.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM 12261] Length = 368 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 160/334 (47%), Positives = 215/334 (64%), Gaps = 1/334 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 ++ L KT P W + EA+ + +E + + K+I + D I+ E+ EE+D Sbjct: 32 KIQELEEKTLKPDFWGSD-EARKVTQELARYQDKLDSWKKIAEDYEDLEIIEEMLKEEED 90 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + ++ +K E+E +Q LLS + D +A + VHAG+GG +SQDWA ML RMY Sbjct: 91 RELQKDFEQKAFSLKKEIERQQLIELLSEDYDQGNAIVSVHAGSGGLDSQDWAEMLYRMY 150 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RW E+ F+ + L++ E GI + TLL++G AYG+LK E+GVHRLVRISP+DS R Sbjct: 151 ARWMEQNDFRVKVLDLIKDSEGGISNVTLLVEGSYAYGYLKSEKGVHRLVRISPFDSAGR 210 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF+S+ + P + + +IEI D RIDTYR+SGAGGQHVN TDSAVRITH P+G+VV Sbjct: 211 RHTSFASVDIVPELPEDEDIEIRTEDLRIDTYRSSGAGGQHVNMTDSAVRITHFPSGIVV 270 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQH NKA A +L++KLYE +++R + K EI WG QIRSYVL PY Sbjct: 271 SCQNERSQHMNKAVAMQVLKSKLYERAIEERRNEMDTIIGEKKEISWGSQIRSYVLHPYT 330 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +VKD RT E + VLDGD+DDF+ A L KK Sbjct: 331 LVKDHRTGEETGNVQAVLDGDIDDFIMAYLRWKK 364 >gi|307708908|ref|ZP_07645368.1| peptide chain release factor 2 [Streptococcus mitis SK564] gi|307620244|gb|EFN99360.1| peptide chain release factor 2 [Streptococcus mitis SK564] Length = 325 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L N + ++++ + ILL+ E D S+ +E Sbjct: 3 EPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVQEELVAQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LAELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|322374638|ref|ZP_08049152.1| peptide chain release factor 2 [Streptococcus sp. C300] gi|321280138|gb|EFX57177.1| peptide chain release factor 2 [Streptococcus sp. C300] Length = 329 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/326 (46%), Positives = 209/326 (64%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + +++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+ KLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQTKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT+ E V+DGDLD F+ A L Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324 >gi|25010633|ref|NP_735028.1| peptide chain release factor 2 [Streptococcus agalactiae NEM316] gi|23094987|emb|CAD46208.1| Unknown [Streptococcus agalactiae NEM316] gi|319744591|gb|EFV96943.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC 13813] Length = 337 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 152/331 (45%), Positives = 216/331 (65%), Gaps = 2/331 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + ++ L + +P W + I A+ +E L +Q+ + +LLE+ L+ED Sbjct: 3 EEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDED 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+ +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LLRM Sbjct: 62 D-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRM 120 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 121 YTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Sbjct: 181 RRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY Sbjct: 241 VSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY 300 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E V+DG+++ F+ A L Sbjct: 301 TMVKDHRTNFELAQVDKVMDGEINGFIDAYL 331 >gi|24216466|ref|NP_713947.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str. 56601] gi|59798086|sp|Q8EZT4|RF2_LEPIN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|24197768|gb|AAN50965.1| peptidyl-tRNA hydrolase involved in peptide chain release [Leptospira interrogans serovar Lai str. 56601] Length = 367 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 164/330 (49%), Positives = 224/330 (67%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L K EDP+LW N EA+++ +++ L+ ++ IQ + D L++L L+E Sbjct: 35 RLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFTIQQDILDFPDLVDLTLDEKG 94 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + + E S R++ + E + L D A+L +H GAGGTESQDWA MLLRMY Sbjct: 95 ENGVGELSSEYNRLQEKFEELELLGALKNPEDLKPAFLNIHPGAGGTESQDWAEMLLRMY 154 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TR+ EK+ ++ +++ G+ AGIK+ATL + G A+G+LKGE GVHRLVRISP+D+N R Sbjct: 155 TRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFLKGENGVHRLVRISPFDANKR 214 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQHVNTTDSAVRITH+P+G+VV Sbjct: 215 RHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHMPSGIVV 274 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ A+ ML+A+LYELE +K +E K +I WG QIRSYV PY Sbjct: 275 ACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSGEKKDIAWGSQIRSYVFHPYN 334 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +VKD RT+ E + + V+DGD++ F+ A L Sbjct: 335 LVKDHRTDHETGNVAAVMDGDIEPFILAYL 364 >gi|313113161|ref|ZP_07798787.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624500|gb|EFQ07829.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii KLE1255] Length = 373 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 150/335 (44%), Positives = 215/335 (64%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D + +R+ L P + + +K + E L +S +++Q D +LE+ Sbjct: 28 DASRKRVQELEHTMSRPGFYDDADLSKKVFDEVGDLKGKLSRFEKLQGLYDDAETMLEML 87 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 EE D +++ E +++ + V+ Q ++L+GE D ++A L HAG GGTE+QDWA M Sbjct: 88 DEEYDPAMIPEAEESVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTGGTEAQDWAEM 147 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY +WA E L+ DG+EAG+KSA++++KG NAYG LK E GVHRLVR+SP+ Sbjct: 148 LYRMYNKWASNHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENGVHRLVRVSPF 207 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 D+N+RR TSF+S+ V P +D++I+++IS D + YR+SGAGGQH+N T SAVR+ H P Sbjct: 208 DANARRQTSFASLEVMPELDNTIQVDISPEDIEMQVYRSSGAGGQHINKTSSAVRLIHKP 267 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TGVVV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + EI WG QIRSYV Sbjct: 268 TGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYV 327 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 328 FMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYL 362 >gi|239981919|ref|ZP_04704443.1| peptide chain release factor 2 [Streptomyces albus J1074] Length = 355 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 159/351 (45%), Positives = 222/351 (63%), Gaps = 5/351 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW + A+ + + HL + + ++ RL Sbjct: 1 MESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRSRL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L ELA EDD E L ++ ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ K + Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKM-DALKGDG 297 Query: 307 G--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 298 GNSWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 348 >gi|7404432|sp|O51101|RF2_BORBU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 359 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/344 (45%), Positives = 225/344 (65%), Gaps = 14/344 (4%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + ++ + + W + A+ +++ + L N I +E+ +++ D L Sbjct: 19 LFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIKDLSDL 78 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHAGAGG 127 E+A E D + L+ + L+ KQ++ LL+ E D+N+A+L +H+GAGG Sbjct: 79 CEIAENEKDTNGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHSGAGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 131 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 189 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 190 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTS 249 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 250 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 309 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 310 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 353 >gi|57866389|ref|YP_188014.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A] gi|71153101|sp|Q8CPZ1|RF2_STAES RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|71153102|sp|Q5HQX5|RF2_STAEQ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|57637047|gb|AAW53835.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A] Length = 371 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 163/348 (46%), Positives = 229/348 (65%), Gaps = 3/348 (0%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 LN + G D +N + DP W + +A+ ++ + L + ++ ++ + Sbjct: 16 HLNQIRGSLDLENKETNIQEYEEMMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNA 75 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D EL EE D + E + +Q+ + +++ + + LL G D+N+A LE+H GA Sbjct: 76 VDDMSATRELLQEEYDEDMKIELEEEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGA 135 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTESQDW +MLLRMY R+ E+ FK E ++ G+EAG+KS TLLIKG NAYG+LK E+ Sbjct: 136 GGTESQDWVSMLLRMYQRYCEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEK 195 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH+N Sbjct: 196 GVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHIN 255 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSK 303 T+SA+RITH PTG+VV Q ERSQ KN+ A ML++KLY+L+L+++E E+A I + Sbjct: 256 KTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEI-RGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IGWG QIRSYV PY M+KD RTN E V+DG++ F++A L Sbjct: 315 KDIGWGSQIRSYVFHPYSMIKDHRTNEETGKVDAVMDGEIGPFIEAYL 362 >gi|169832431|ref|YP_001694217.1| peptide chain release factor 2 [Streptococcus pneumoniae Hungary19A-6] gi|172079637|ref|ZP_02709786.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC1873-00] gi|183603431|ref|ZP_02717047.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC3059-06] gi|183603478|ref|ZP_02714985.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC0288-04] gi|225854263|ref|YP_002735775.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA] gi|237650402|ref|ZP_04524654.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974] gi|237822484|ref|ZP_04598329.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974M2] gi|303260019|ref|ZP_07345993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293] gi|303261425|ref|ZP_07347373.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS292] gi|303264092|ref|ZP_07350013.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397] gi|303266295|ref|ZP_07352186.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457] gi|303269536|ref|ZP_07355300.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458] gi|307127694|ref|YP_003879725.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B] gi|168994933|gb|ACA35545.1| peptide chain release factor 2 [Streptococcus pneumoniae Hungary19A-6] gi|172041988|gb|EDT50034.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC1873-00] gi|183574752|gb|EDT95280.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC0288-04] gi|183576822|gb|EDT97350.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC3059-06] gi|225722944|gb|ACO18797.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA] gi|302637559|gb|EFL68046.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS292] gi|302638938|gb|EFL69399.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293] gi|302640921|gb|EFL71304.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458] gi|302644225|gb|EFL74481.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457] gi|302646497|gb|EFL76723.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397] gi|306484756|gb|ADM91625.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B] Length = 329 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 154/326 (47%), Positives = 209/326 (64%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT+ E V+DGDLD F+ A L Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324 >gi|139474158|ref|YP_001128874.1| peptide chain release factor 2 [Streptococcus pyogenes str. Manfredo] gi|166225116|sp|A2RFN2|RF2_STRPG RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|134272405|emb|CAM30661.1| peptide chain release factor 2 [Streptococcus pyogenes str. Manfredo] Length = 365 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/338 (45%), Positives = 217/338 (64%), Gaps = 2/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D + ++ L +P W + I A+ +E L +Q+ + +LL Sbjct: 24 LDLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLL 83 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ L+EDD S+ +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW Sbjct: 84 EM-LDEDD-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDW 141 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ++LLRMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRI Sbjct: 142 GDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRI 201 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DS RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGGQ+VN + VR+T Sbjct: 202 SPFDSAKRRHTSFASVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLT 261 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIR Sbjct: 262 HIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIR 321 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYV PY MVKD RTN E V+DG+++ F+ A L Sbjct: 322 SYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYL 359 >gi|296169215|ref|ZP_06850868.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896113|gb|EFG75780.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 368 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 168/351 (47%), Positives = 225/351 (64%), Gaps = 5/351 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + + H + I+E+ Sbjct: 12 LDSTLTTVERVLDVDGLRSRIEKLEHEASDPQLWDDQSNAQRVTSQLSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA EED L E L+ ++ ++E + +LLSGE D +A + + Sbjct: 72 RQRLDDLPVLYELAAEEDAADALAEADAELKALRADIEATEVRTLLSGEYDEREALVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYLRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V PVVD + I+I E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVDTTDHIDIPEGDVRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + ++ Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRSEERAEL-DAL 308 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 309 KGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 359 >gi|255535765|ref|YP_003096136.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium 3519-10] gi|255341961|gb|ACU08074.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium 3519-10] Length = 370 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 148/323 (45%), Positives = 223/323 (69%), Gaps = 2/323 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 KT P W +A++ M++ + ++ +EI RL D +L+E A E+ D +E Sbjct: 36 KTLSPEFWDKPKDAEIFMKQLRSKKKWVTDYEEIFSRLEDIQVLMEFAKEDPDSE--KEL 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + ++E +F+++LS E D A L++ AGAGGTES DWA+ML+RMYT WAEK+ Sbjct: 94 DEAFPVLLEKIEDLEFKNMLSNEGDELSAVLQITAGAGGTESCDWASMLMRMYTMWAEKQ 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K L +G+ AGIK+ TL I G A+G+L+GE GVHRLVRISP+DSN++RHTSF S Sbjct: 154 GYKLRELNYQEGDVAGIKTVTLEIDGEFAFGYLRGENGVHRLVRISPFDSNAKRHTSFVS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP+VDD+IEI I+ +D +T R+SGAGGQ+VN ++AVR+ H PTG++++ + RS Sbjct: 214 VYVYPLVDDTIEININPADISFETMRSSGAGGQNVNKVETAVRLRHAPTGIIIENSESRS 273 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +NK +A +LR++LYE+EL++R + N E+ K +I WG QIR+YV+ PY++VKD+R+ Sbjct: 274 QLQNKEKAMQLLRSRLYEMELEERMKARNEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRS 333 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 E + V++G+L F+KA L Sbjct: 334 GHETSDVDAVMNGELTPFLKAFL 356 >gi|320528516|ref|ZP_08029673.1| peptide chain release factor 2 [Solobacterium moorei F0204] gi|320131102|gb|EFW23675.1| peptide chain release factor 2 [Solobacterium moorei F0204] Length = 350 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 159/348 (45%), Positives = 226/348 (64%), Gaps = 12/348 (3%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + LFD + +RL+ N + W + +A+ ++RE N + + E L D+ Sbjct: 1 MATLFDLEGKEKRLAENNALMAEADFWNDQKKAQKIIRE----SNQLKVLIETHHSLTDS 56 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEV--EYKQFE--SLLSGEADSNDAYLEVHAGA 125 L + E S ++ ++ + E ++++FE LLSG D++++ LE+H GA Sbjct: 57 FAELSEGIGELSSSFDEDMNELISEEYTETMKKFEEFEIQVLLSGPYDNHNSILEIHPGA 116 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+ DWA ML RMY RWAE++ FK E ++ +GEEAG+KS ++LI+GP AYG+LK E Sbjct: 117 GGTEAMDWAAMLYRMYMRWAERKGFKIELMDYQEGEEAGMKSCSVLIQGPMAYGYLKAEN 176 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DSN+RRHTSF+S+ + P +D +EIEI + D I T RASGAGGQH+N Sbjct: 177 GVHRLVRISPFDSNARRHTSFASVEIMPEFEDDLEIEIDDKDLDIITMRASGAGGQHINK 236 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--GESSK 303 TDSAVR+THIP+G+ V CQ +RSQ +N+ NML++KL +L++++ EE A GE Sbjct: 237 TDSAVRMTHIPSGITVFCQSQRSQIQNREACLNMLKSKLLQLKIRENEERAAAVRGEVKA 296 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E WG QIRSYV PY MVKDLRT E + V+DG++D F+ + L Sbjct: 297 NE--WGSQIRSYVFAPYTMVKDLRTGHEAGNVQAVMDGEIDGFIDSYL 342 >gi|258651861|ref|YP_003201017.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233] gi|258555086|gb|ACV78028.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233] Length = 369 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/349 (44%), Positives = 219/349 (62%), Gaps = 4/349 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D + + L+ P LW + A+ + H + IK++ Sbjct: 12 LDTTLTSIEKVMDVDRLARSIDELSEAASAPDLWNDQENAQKVTSRLSHAQAELKRIKDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L EL E+ D + E L ++ E++ ++ +LLSGE D +A + + Sbjct: 72 RQRLDDLEVLFELGDEDPDTYL--EAQQELLGLQKEIDAQEVRTLLSGEYDEREALVTIR 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A ML+RMY RW+E+ + TE + EEAGIKS T +K P AYG L Sbjct: 130 SEAGGVDAADFAEMLMRMYLRWSERHGYNTEVYDTSYAEEAGIKSTTFQVKAPYAYGTLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +++ E D R+D YR+SG GGQ Sbjct: 190 VEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVETSDHVDVDEKDLRVDVYRSSGPGGQG 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +L++KL LE +++EE A + Sbjct: 250 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMAVLQSKL--LERRRQEERAVMDALK 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 T WG Q+RSYVL PYQMVKDLRTN E +PS V DG++DDF++A + Sbjct: 308 DTGNSWGNQMRSYVLHPYQMVKDLRTNFEVGNPSAVFDGEIDDFIEAGI 356 >gi|228477420|ref|ZP_04062056.1| peptide chain release factor 2 [Streptococcus salivarius SK126] gi|228250855|gb|EEK10043.1| peptide chain release factor 2 [Streptococcus salivarius SK126] Length = 337 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L + +P W + I A+ +E L +Q+ + + LE+ LEEDD Sbjct: 5 IALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEM-LEEDDS 63 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 + + K+ Y + LLS D N+A LE+H G+GGTE+QDWA+MLLRMY Sbjct: 64 VQEELEETLEKLDKIMTSY-EMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLLRMYQ 122 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RR Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV Sbjct: 183 HTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV PY M Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RT E V+DGD++ F+ A L Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIEGFIDAYL 331 >gi|320161067|ref|YP_004174291.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1] gi|319994920|dbj|BAJ63691.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1] Length = 351 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 164/350 (46%), Positives = 232/350 (66%), Gaps = 17/350 (4%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCD 68 +FD + L L + E+P +W + A+ LM+ R+ ++ F+K QD L Sbjct: 6 IFDLSSREMLLEQLQKEAENPGIWDDPTSAQRLMKRIADLREEIEGWNQFLKRCQDGL-- 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 ELA E +D S+ ++ + ++ E++ ++ +LLSG D +A L ++AGAGGT Sbjct: 64 -----ELA-ESEDESLREDLEKEISALEKELQQRELTTLLSGPYDHENALLTINAGAGGT 117 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 +SQDWA+ML+RMY RW E+R F +E L+ +GEEAGIKS T+ + GP AYG+L+GE+GVH Sbjct: 118 DSQDWASMLMRMYLRWCERRGFDSEILDFSEGEEAGIKSVTIAVTGPYAYGYLRGEKGVH 177 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTD 247 RLVR+SP+D+ RRHTSF+ + V P + + EI+I+ D RID YR+S AGGQ+V Sbjct: 178 RLVRLSPFDAAHRRHTSFAQVEVLPEISNGDNEIQINPDDLRIDIYRSSSAGGQNVQKNA 237 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTE 305 +AVRITHIPTG+VV CQ ERSQ +N+ A +LRA+L EL+ Q++E ++A + GE K E Sbjct: 238 TAVRITHIPTGIVVSCQNERSQMQNRENAMRVLRARLAELKRQEQERQLAELRGEYIKAE 297 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG QIRSYVL PYQ+VKD RT E + VLDG+LD F++A L +K Sbjct: 298 --WGSQIRSYVLHPYQLVKDHRTEYETGNTQAVLDGELDGFIEAYLRSQK 345 >gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22] gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22] Length = 368 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 160/355 (45%), Positives = 226/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAVPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELASVRKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE++ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL L+ +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LDRRRQEEQARM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G+++ F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364 >gi|218282777|ref|ZP_03488959.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989] gi|218216361|gb|EEC89899.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989] Length = 346 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 161/345 (46%), Positives = 230/345 (66%), Gaps = 14/345 (4%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNL 70 FD + +++ + +T +P WQ+ +A+ ++R + L + + +E+ + L D Sbjct: 4 FDLSSKNKQIEDYDKQTLEPDFWQDQKKAQQVIRAKNALKDIVDRYEELDLQLNSLNDTA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGT 128 L+ +E+ I +E + + ++ +++ FE LLS E D N+A LE+H GAGGT Sbjct: 64 DELKSEFDEELMMIAEE-----EYMDMDKKFENFEIQVLLSHEYDQNNAILEIHPGAGGT 118 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ES DWA+ML RMYTR+AEK FK L+ G+EAGIKS T L++G AYG+LK E+GVH Sbjct: 119 ESCDWASMLYRMYTRYAEKHGFKVTVLDYLPGDEAGIKSVTFLVEGDKAYGYLKSEKGVH 178 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS +RRHTSF+S+ V P +D IEI+I D ++T RASGAGGQH+N TDS Sbjct: 179 RLVRISPFDSGARRHTSFASLDVMPQFNDEIEIDIKPEDLIVETKRASGAGGQHINKTDS 238 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEI 306 AVR+ H PTG+V CQ RSQH+N+ + +L+++LY+LE++++E +IA I G S E Sbjct: 239 AVRMVHKPTGIVATCQNGRSQHENREECLRVLKSRLYQLEIEEQEKKIAQIKGVQSANE- 297 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV+ PY +VKD+RT E + VLDGDLD+F+ A L Sbjct: 298 -WGSQIRSYVMHPYSLVKDVRTGYETSQVQSVLDGDLDEFIFAYL 341 >gi|239930935|ref|ZP_04687888.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] Length = 352 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 160/351 (45%), Positives = 222/351 (63%), Gaps = 5/351 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW N EA+ + HL + + ++ R+ Sbjct: 1 MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ S ++I ESD R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL LE +++EE A + ++ K + Sbjct: 241 DSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKL--LERRRQEEQAKM-DALKGDG 297 Query: 307 G--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 298 GNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 348 >gi|306835540|ref|ZP_07468554.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC 49726] gi|304568597|gb|EFM44148.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC 49726] Length = 370 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 220/351 (62%), Gaps = 6/351 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 14 QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE S+ E +L ++ +E + ++LSGE D +A + + Sbjct: 74 LRGRLDDMPVMYELAEEEGTVSVADE---DLAELESAIESLEVTTMLSGEYDPREAVINI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWA K K + +I EEAGIKSAT ++ G YG L Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVR+SP+D+ RR TSF+ + V PVV+ + I++ +++ R+D YR+SG GGQ Sbjct: 191 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q +R E+ +G Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F++A + Sbjct: 311 GGNA--SWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGI 359 >gi|14195074|sp|P58105|RF2_CHLMU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 369 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 163/343 (47%), Positives = 213/343 (62%), Gaps = 5/343 (1%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + L L + W +V A + + L + E+++++ Sbjct: 23 LFDPEEKETELKNLEQLSIQDSFWDDVSRAGRISEKIARLKQQLLEYNELKNKINSIKFF 82 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130 LE D I +E I E + ++E+L L+GE D N +L ++AGAGGTES Sbjct: 83 LEDEESSKDLEIQKELEKEF--IFCEKKIAEWETLRLLAGELDRNSCFLSINAGAGGTES 140 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW ML RMY+RWA +K E ++ DGE AGIK TL + G AYG+ K E GVHRL Sbjct: 141 CDWVEMLFRMYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRL 200 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAV Sbjct: 201 VRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 260 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E N K EI WG Sbjct: 261 RITHFPTGIVVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGS 320 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA LA Sbjct: 321 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLA 363 >gi|19745741|ref|NP_606877.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS8232] gi|50913897|ref|YP_059869.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10394] gi|71903175|ref|YP_279978.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS6180] gi|94988152|ref|YP_596253.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS9429] gi|94990034|ref|YP_598134.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10270] gi|94992039|ref|YP_600138.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS2096] gi|94993945|ref|YP_602043.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10750] gi|306827732|ref|ZP_07461004.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC 10782] gi|19747880|gb|AAL97376.1| putative peptide chain release factor 2 [Streptococcus pyogenes MGAS8232] gi|50902971|gb|AAT86686.1| Bacterial Peptide Chain Release Factor 2 [Streptococcus pyogenes MGAS10394] gi|71802270|gb|AAX71623.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes MGAS6180] gi|94541660|gb|ABF31709.1| bacterial peptide chain release factor 2 (RF-2) [Streptococcus pyogenes MGAS9429] gi|94543542|gb|ABF33590.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus pyogenes MGAS10270] gi|94545547|gb|ABF35594.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus pyogenes MGAS2096] gi|94547453|gb|ABF37499.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus pyogenes MGAS10750] gi|304430050|gb|EFM33087.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC 10782] Length = 337 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 152/331 (45%), Positives = 215/331 (64%), Gaps = 2/331 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + ++ L +P W + I A+ +E L +Q+ + +LLE+ L+ED Sbjct: 3 EEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDED 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+ +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LLRM Sbjct: 62 D-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRM 120 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 121 YTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Sbjct: 181 RRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY Sbjct: 241 VSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY 300 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E V+DG+++ F+ A L Sbjct: 301 TMVKDHRTNFELAQVDKVMDGEINGFIDAYL 331 >gi|253752128|ref|YP_003025269.1| peptide chain release factor 2 [Streptococcus suis SC84] gi|253753953|ref|YP_003027094.1| peptide chain release factor 2 [Streptococcus suis P1/7] gi|253755172|ref|YP_003028312.1| peptide chain release factor 2 [Streptococcus suis BM407] gi|251816417|emb|CAZ52048.1| peptide chain release factor 2 [Streptococcus suis SC84] gi|251817636|emb|CAZ55384.1| peptide chain release factor 2 [Streptococcus suis BM407] gi|251820199|emb|CAR46580.1| peptide chain release factor 2 [Streptococcus suis P1/7] Length = 364 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 155/350 (44%), Positives = 214/350 (61%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L G D + + ++ L K +P W + + A+ +E L N + Sbjct: 12 ELGKKLTSFRGSLDLEGLEEEIAILENKMTEPDFWNDNLAAQKTSQELNELKNTYGNFHQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D ++ ILL+ E D S+ E + L + + + LLS D N+A LE+ Sbjct: 72 MLDLYDESEILLDFLAE--DESVRDELVEKLVELDKTMTAYEMTLLLSEPYDHNNAILEI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G+GGTE+QDW MLLRMY R+ + F E L+ G+EAGIKS TL GPNAYG L Sbjct: 130 HPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKSVTLSFTGPNAYGLL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IEIEI + + ++DT+R+ GAGGQ Sbjct: 190 KSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN + VR+THIPTG+V Q +R+Q+ N+ +A +L+AKLY+LE +K+ + + Sbjct: 250 NVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K EI WG QIRSYV PY MVKD RT E V+DGDLD F+ A L Sbjct: 310 DKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFIDAYL 359 >gi|289168241|ref|YP_003446510.1| peptide chain release factor 2 [Streptococcus mitis B6] gi|288907808|emb|CBJ22648.1| peptide chain release factor 2 [Streptococcus mitis B6] Length = 325 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L N + ++++ + ILL+ E D S+ +E Sbjct: 3 EPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHEELVTQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|227502940|ref|ZP_03932989.1| peptide chain release factor 2 [Corynebacterium accolens ATCC 49725] gi|227076362|gb|EEI14325.1| peptide chain release factor 2 [Corynebacterium accolens ATCC 49725] Length = 367 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 156/351 (44%), Positives = 220/351 (62%), Gaps = 6/351 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 11 QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE S+ E +L ++ +E + ++LSGE D +A + + Sbjct: 71 LRGRLDDMPVMYELAEEEGTVSVADE---DLAELESAIESLEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWA K K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVR+SP+D+ RR TSF+ + V PVV+ + I++ +++ R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q +R E+ +G Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 307 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F++A + Sbjct: 308 GGNA--SWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGI 356 >gi|45656368|ref|YP_000454.1| peptide chain release factor 2 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59798054|sp|Q72V33|RF2_LEPIC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|45599602|gb|AAS69091.1| peptide chain release factor 2 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 367 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 164/330 (49%), Positives = 224/330 (67%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L K EDP+LW N EA+++ +++ L+ ++ IQ + D L++L L+E Sbjct: 35 RLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFTIQQDILDFPDLVDLTLDEKG 94 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + + E S R++ + E + L D A+L +H GAGGTESQDWA MLLRMY Sbjct: 95 ENGVGELSSEYNRLQEKFEELELLGALKNPEDLKPAFLNIHPGAGGTESQDWAEMLLRMY 154 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TR+ EK+ ++ +++ G+ AGIK+ATL + G A+G+LKGE GVHRLVRISP+D+N R Sbjct: 155 TRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFLKGENGVHRLVRISPFDANKR 214 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQHVNTTDSAVRITH+P+G+VV Sbjct: 215 RHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHMPSGIVV 274 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ KN+ A+ ML+A+LYELE +K +E K +I WG QIRSYV PY Sbjct: 275 ACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSGEKKDITWGSQIRSYVFHPYN 334 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +VKD RT+ E + + V+DGD++ F+ A L Sbjct: 335 LVKDHRTDHETGNVAAVMDGDIEPFILAYL 364 >gi|326692249|ref|ZP_08229254.1| peptide chain release factor 2 [Leuconostoc argentinum KCTC 3773] Length = 333 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 213/320 (66%), Gaps = 5/320 (1%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQ 93 W + ++A+ ++ E L N + ++ + +L+E+ E+ +D E + +++ Sbjct: 6 FWDDNVKAQKVIEENNILKNRRDSFLNLTNQAEEIAVLIEMLSEDPEDEDTAAELAASVE 65 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 +++ +VE E LL+ D+N+A LEVH G+GGTES DW L RMYTRWA++ F+ E Sbjct: 66 KVQKDVEAYNLEQLLTEPYDANNAILEVHPGSGGTESTDWGANLYRMYTRWAQQHGFQVE 125 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 L+ H G+EAGI SAT+ I G NAYG+L+ E+GVHR VRISP+DS RRHTSF S+ V P Sbjct: 126 VLDYHAGDEAGIDSATIKISGHNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVSVDVMP 185 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +DD+IE+E+ + D ++D +R+ GAGGQ+VN + VR+TH PTG+VV ER+Q+ N+ Sbjct: 186 ELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVSSTVERTQYGNR 245 Query: 274 AQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 A +L+ KLY+LEL+K+ E A GE K E GWG QIRSYVL PYQMVKD RTN E Sbjct: 246 DYAMRLLKGKLYQLELEKQAAERAALTGE--KMENGWGSQIRSYVLHPYQMVKDHRTNYE 303 Query: 332 KTSPSDVLDGDLDDFMKATL 351 P VLDGDLD F+ A L Sbjct: 304 TNQPQQVLDGDLDPFINAYL 323 >gi|322388283|ref|ZP_08061887.1| peptide chain release factor RF2 [Streptococcus infantis ATCC 700779] gi|321140955|gb|EFX36456.1| peptide chain release factor RF2 [Streptococcus infantis ATCC 700779] Length = 325 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 155/321 (48%), Positives = 208/321 (64%), Gaps = 4/321 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSD 90 +P W + I A+ +E L N + ++ D L D + ILL+ E D S+ E + Sbjct: 3 EPDFWNDNIAAQKTSQELNELKNTYNTFHKM-DELQDEVEILLDFLAE--DESVKDELVE 59 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + F Sbjct: 60 KLSELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGF 119 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 120 KVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVE 179 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +DD+IE++I E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 180 VMPELDDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQY 239 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RTN Sbjct: 240 GNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTNF 299 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E V+DGDLD F+ A L Sbjct: 300 EVAQVDKVMDGDLDGFIDAYL 320 >gi|312199813|ref|YP_004019874.1| peptide chain release factor 2 [Frankia sp. EuI1c] gi|311231149|gb|ADP84004.1| peptide chain release factor 2 [Frankia sp. EuI1c] Length = 367 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 156/347 (44%), Positives = 223/347 (64%), Gaps = 4/347 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R + L + DP LW + A+++ R+ + IS ++ + Sbjct: 12 LDSTLTGIETVLDVEGLRRRAADLEQEASDPDLWSDQDRAQVVTRKLSSVRGDISRVEGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +DRL DN I+ LE+DD ++ E + L + ++ + +LLSGE D DA +++ Sbjct: 72 RDRL-DN-IMTAFELEDDD--LISEATGQLPTLARDISTLEVRTLLSGEYDERDAIVQLS 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT L+K P AYG L+ Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYSTEVYDSSEAEEAGLKSATFLVKAPYAYGTLR 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+ +RR TSF+ + + PVV+ S ++I + D R+D +R+SG GGQ Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEITPVVELSDHVDIDDKDLRVDIFRSSGPGGQG 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 248 VNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMVVLQAKLLERRRAEEAAEKQRLTGG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ +G QIR+YVL PYQMVKDLRT +E ++ VLDG++DDF+ A Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTGGVLDGEIDDFIDA 354 >gi|183603302|ref|ZP_02711260.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC1087-00] gi|183603790|ref|ZP_02721350.2| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016] gi|194397508|ref|YP_002037401.1| peptide chain release factor 2 [Streptococcus pneumoniae G54] gi|225856431|ref|YP_002737942.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031] gi|225858565|ref|YP_002740075.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585] gi|225860729|ref|YP_002742238.1| peptide chain release factor 2 [Streptococcus pneumoniae Taiwan19F-14] gi|298229611|ref|ZP_06963292.1| peptide chain release factor 2 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255815|ref|ZP_06979401.1| peptide chain release factor 2 [Streptococcus pneumoniae str. Canada MDR_19A] gi|307067358|ref|YP_003876324.1| protein chain release factor B [Streptococcus pneumoniae AP200] gi|183570249|gb|EDT90777.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC1087-00] gi|183578420|gb|EDT98948.1| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016] gi|194357175|gb|ACF55623.1| peptide chain release factor 2 [Streptococcus pneumoniae G54] gi|225721230|gb|ACO17084.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585] gi|225726237|gb|ACO22089.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031] gi|225727373|gb|ACO23224.1| peptide chain release factor 2 [Streptococcus pneumoniae Taiwan19F-14] gi|306408895|gb|ADM84322.1| Protein chain release factor B [Streptococcus pneumoniae AP200] Length = 329 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 154/326 (47%), Positives = 208/326 (63%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT+ E V+DGDLD F+ A L Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324 >gi|325109320|ref|YP_004270388.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces brasiliensis DSM 5305] gi|324969588|gb|ADY60366.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces brasiliensis DSM 5305] Length = 373 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 161/341 (47%), Positives = 225/341 (65%), Gaps = 4/341 (1%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D +++ +N + P W N +A+ M E + L + ++ ++E+ D +LL Sbjct: 23 LDYDVKCEQVKEINDRMAQPGFWDNQEKAQETMAELRRLKSLVTPLEELVQGRDDLEVLL 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E A +D +QE + R+ V+ +F+ LL D+ +AY+ + AG GGT++ DW Sbjct: 83 EFAEADDSEETVQEITSTCDRLGSIVDKVEFQLLLGQPEDALNAYVTIQAGEGGTDAADW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAEK + TE LE D EEAGI+ ATLLIKG A+G+LKGE G HRLVR+ Sbjct: 143 AEMLLRMYIRWAEKEEMATELLERTDAEEAGIRHATLLIKGDYAFGYLKGESGNHRLVRM 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP++S +R T+F+++ V P VDDS EI+I ++D DT RA GAGGQHVN T+SAVR+ Sbjct: 203 SPFNSAGKRQTAFAAVDVTPEVDDSFEIDIDWDNDVDEDTMRAGGAGGQHVNKTESAVRL 262 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE--IANIGESSKTEIGWGR 310 TH +G+VV+CQ ERSQH+N+A A ML AKLY++E++KRE A GE SK G G Sbjct: 263 THKESGLVVRCQNERSQHQNRASARKMLTAKLYQMEIEKRESENAARRGEKSKIGFG-GE 321 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YVLQP Q VKD R+ ++ +P VL+G+LD F++A L Sbjct: 322 TIRNYVLQPEQFVKDTRSELKTANPLTVLEGELDPFLEAYL 362 >gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 372 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 158/350 (45%), Positives = 222/350 (63%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D + +++ L ++ DP LW + A+ + R+ L++ ++ I I Sbjct: 13 LAATLASVSAVLDLEAMHTQIAELREQSADPELWADQDNAQKVTRQLSSLESMVNKINGI 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 RL D +L ELA EDD E L +++ E+ + +LL+G D +A + ++ Sbjct: 73 GQRLDDLGVLYELAEAEDDADTRVEADRELDQLRKEIGELEVRTLLNGPHDEREAIVTIN 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ DWA ML RMY RWAE+ + T+ E EEAGIKS + +K P AYG L+ Sbjct: 133 SQAGGVDAADWAQMLQRMYLRWAERHGYPTDVYETSYAEEAGIKSTSFAVKTPFAYGTLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE G HRLVRISP+D+ +RR TSF+ + V PVV+ S IEI + D R+D YR+SG GGQ Sbjct: 193 GEHGTHRLVRISPFDNQNRRQTSFAGVDVVPVVEQSDHIEIDDGDLRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +ML+AKL L ++ EE A + E Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQLQNKATAMSMLQAKL--LARKREEEQAALDEIR 310 Query: 303 KTEI-GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+R+YVL PYQ VKD+RT E + S VLDGD+D+F+ A + Sbjct: 311 GDSVSSWGTQMRNYVLHPYQSVKDVRTGAETGNTSGVLDGDIDEFIDAEI 360 >gi|296435987|gb|ADH18161.1| peptide chain release factor 2 [Chlamydia trachomatis G/9768] gi|296437848|gb|ADH20009.1| peptide chain release factor 2 [Chlamydia trachomatis G/11074] gi|297140348|gb|ADH97106.1| peptide chain release factor 2 [Chlamydia trachomatis G/9301] Length = 334 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 158/323 (48%), Positives = 210/323 (65%), Gaps = 9/323 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V+ A + L +S E+++++ ++ LE+++ S E L++ Sbjct: 10 FWDDVVRAGKISERIARLKQQLSEFNELKNKVS----AIQFFLEDEESSKDLEMQKELEK 65 Query: 95 IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + E K E LLSGE D N +L ++AGAGGTES DW MLLRMY RWA + Sbjct: 66 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ ERSQ Sbjct: 186 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQI 245 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ NML A++Y+ LQ+R E NI +K E+ WG QIR+YV QPY +VKD+RT Sbjct: 246 QNREACMNMLCARIYQKLLQERLEKQNIDRKNKKEVSWGSQIRNYVFQPYTLVKDVRTGY 305 Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352 E + ++DG+ LD F+KA L Sbjct: 306 EVGNIQAMMDGELLDAFIKAYLV 328 >gi|15674713|ref|NP_268887.1| peptide chain release factor 2 [Streptococcus pyogenes M1 GAS] gi|71910343|ref|YP_281893.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS5005] gi|13621834|gb|AAK33608.1| putative peptide chain release factor 2 [Streptococcus pyogenes M1 GAS] gi|71853125|gb|AAZ51148.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes MGAS5005] Length = 337 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 152/331 (45%), Positives = 215/331 (64%), Gaps = 2/331 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + ++ L +P W + I A+ +E L +Q+ + +LLE+ L+ED Sbjct: 3 EEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDED 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+ +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LLRM Sbjct: 62 D-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRM 120 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 121 YTRFGNANGFKIEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Sbjct: 181 RRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY Sbjct: 241 VSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY 300 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E V+DG+++ F+ A L Sbjct: 301 TMVKDHRTNFELAQVDKVMDGEINGFIDAYL 331 >gi|300813058|ref|ZP_07093436.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123317|ref|YP_004033576.1| bacterial peptide chain release factor 2 (brf-2) [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300495899|gb|EFK31043.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312279880|gb|ADQ60599.1| Bacterial peptide chain release factor 2 (BRF-2) [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 332 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 157/320 (49%), Positives = 201/320 (62%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N +A+ L+ E L ++ L D LEL E D + ++T D Sbjct: 3 EPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTEDQ 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L +++ E + LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R K Sbjct: 63 LAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRGLK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 123 FEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P VDDSIEI+I D RID YR+SGAGGQH+N T SAVRITHIPTG+V Q +RSQ + Sbjct: 183 IPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQFQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A N +RAKL+ LE +K+ + + + +I WG QIRSYV PY MVKD RT E Sbjct: 243 NRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTGYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DG LD F+ A L Sbjct: 303 TADVGGVMDGKLDPFIYAYL 322 >gi|295134177|ref|YP_003584853.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87] gi|294982192|gb|ADF52657.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87] Length = 365 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 154/327 (47%), Positives = 222/327 (67%), Gaps = 6/327 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--ALEEDDCSILQ 86 KT DP W N EA+ M+ + ++ + L + +LLE E ++ +++ Sbjct: 36 KTFDPSFWDNPSEAEEFMKTLKGKKKWVNDYNVAKSGLEELQVLLEFYNEGEAEESDVIK 95 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + Q+I VE +F+++LS E D A L++ AGAGGTES DWA ML+RMY WAE Sbjct: 96 Q----YQKILDVVEELEFKNMLSEEGDDLSAVLQITAGAGGTESCDWAQMLMRMYLMWAE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 K+ FK + L +G+ AGIK+ TL I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF Sbjct: 152 KQGFKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSF 211 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S++VYP+VDD+IEIEI+ +D I T R+SGAGGQ+VN ++ V++ H PTG+ + C + Sbjct: 212 ASVYVYPLVDDTIEIEINPADIEITTARSSGAGGQNVNKVETKVQLVHHPTGIQISCSET 271 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH N+ +A ML+++LYE+EL+K+ E E+SK +I WG QIR+YV+ PY++VKD+ Sbjct: 272 RSQHDNRNRAMQMLKSQLYEIELEKQREQREDIEASKKKIEWGSQIRNYVMHPYKLVKDV 331 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353 RT E + V+DG +D F+KA L + Sbjct: 332 RTAEETGNVDSVMDGHIDQFLKAYLMM 358 >gi|260063027|ref|YP_003196107.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501] gi|88784596|gb|EAR15766.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501] Length = 313 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 140/263 (53%), Positives = 195/263 (74%) Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 +L+R +E +F ++LS E D A L++ AGAGGTES DWA+ML+RMY W+EK + Sbjct: 44 HLKRATDAIEKLEFRNMLSDEGDDLTAVLQITAGAGGTESCDWASMLMRMYMMWSEKNGY 103 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K L +G+ AGIK+ TL I+GP A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++ Sbjct: 104 KVRELNYQEGDVAGIKTVTLEIEGPFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVY 163 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 VYP+ DDSIEIEI+ +D I T R+SGAGGQ+VN ++ V++ H PTG+ + C RSQH Sbjct: 164 VYPLADDSIEIEINPADIEITTARSSGAGGQNVNKVETKVQLVHKPTGIQISCSDSRSQH 223 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+A A ML+++LYE+EL+K++E ESSK +I WG QIR+YV+ PY++VKD+RT Sbjct: 224 DNRATALKMLKSQLYEIELRKKQEAREAIESSKMKIEWGSQIRNYVMHPYKLVKDVRTGE 283 Query: 331 EKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG+++DF+KA L + Sbjct: 284 ETGNVDAVMDGEINDFLKAFLMM 306 >gi|15902709|ref|NP_358259.1| peptide chain release factor 2 [Streptococcus pneumoniae R6] gi|116516272|ref|YP_816152.1| peptide chain release factor 2 [Streptococcus pneumoniae D39] gi|182683675|ref|YP_001835422.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14] gi|303255830|ref|ZP_07341871.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455] gi|15458252|gb|AAK99469.1| Peptide chain release factor 2 [Streptococcus pneumoniae R6] gi|116076848|gb|ABJ54568.1| peptide chain release factor 2 [Streptococcus pneumoniae D39] gi|182629009|gb|ACB89957.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14] gi|302597214|gb|EFL64319.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455] Length = 329 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 153/326 (46%), Positives = 210/326 (64%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ + +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT+ E V+DGDLD F+ A L Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYL 324 >gi|242066770|ref|XP_002454674.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor] gi|241934505|gb|EES07650.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor] Length = 467 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 151/335 (45%), Positives = 216/335 (64%), Gaps = 1/335 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W ++R L E P LW++ + A + RE+ L I + +++ L +++ +L Sbjct: 118 LKWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQLEQELIEHIEML 177 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 LA EE+D + E+ L +++ + K+ +LLS + DS ++EV AGAGGTES DW Sbjct: 178 RLAREENDNELEMESMRALADMRISAKEKELNALLSRDNDSCSCFIEVQAGAGGTESMDW 237 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M++ MY WA++R + +E GE AGIK AT+ + G A+G+ K E GVHRLVRI Sbjct: 238 AAMVMNMYKSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 297 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSF+++ V P++ D S +I +SD RI+ +R+ G GGQH NTT+SA+RI Sbjct: 298 SPFDSGKRRHTSFAAVAVIPILGDASSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRI 357 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ Q ERSQH NKA A +L+++L +LE+ ++ ++ S EI WG QI Sbjct: 358 VHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQI 417 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 RSYVL PY+MVKDLRTN E + P VL+GDLDDF+ Sbjct: 418 RSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFI 452 >gi|104773716|ref|YP_618696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513713|ref|YP_812619.1| protein chain release factor B [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422797|emb|CAI97438.1| Peptide chain release factor 2 (RF-2) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093028|gb|ABJ58181.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125366|gb|ADY84696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 332 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 157/320 (49%), Positives = 201/320 (62%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N +A+ L+ E L ++ L D LEL E D + ++T D Sbjct: 3 EPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDLTDEETALELLRLEADADLQKDTEDQ 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L +++ E + LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R K Sbjct: 63 LAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRGLK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 123 FEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P VDDSIEI+I D RID YR+SGAGGQH+N T SAVRITHIPTG+V Q +RSQ + Sbjct: 183 IPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQFQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A N +RAKL+ LE +K+ + + + +I WG QIRSYV PY MVKD RT E Sbjct: 243 NRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTGYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DG LD F+ A L Sbjct: 303 TADVGGVMDGKLDPFIYAYL 322 >gi|312862769|ref|ZP_07723009.1| peptide chain release factor 2 [Streptococcus vestibularis F0396] gi|311101629|gb|EFQ59832.1| peptide chain release factor 2 [Streptococcus vestibularis F0396] Length = 337 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 153/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L + +P W + I A+ +E L +Q+ + + LE+ LEEDD Sbjct: 5 IALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEM-LEEDDS 63 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 + + K+ Y + LLS D N+A LE+H G+GGTE+QDWA+MLLRMY Sbjct: 64 IQEELEETLEKLDKIMTSY-EMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLLRMYQ 122 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RR Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV Sbjct: 183 HTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV PY M Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RT E V+DGD++ F+ A L Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIEGFIDACL 331 >gi|283850198|ref|ZP_06367487.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B] gi|283574224|gb|EFC22195.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B] Length = 314 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 141/279 (50%), Positives = 195/279 (69%), Gaps = 1/279 (0%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + LA +++ IL ++ + + E+ + + G D+ DA LE+H GAGGTE+QD Sbjct: 32 MSLAKDDNSPEILDALAEQIVSLGSELADAELAAFF-GPEDNADAILEIHPGAGGTEAQD 90 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMY RWAE+++F + L+ G+EAG+KS TL I GP AYG L E+G+HRL+R Sbjct: 91 WAEMLLRMYRRWAERKQFGIKVLDFLPGDEAGVKSVTLQISGPYAYGLLDAEKGIHRLIR 150 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+DS+ RRHTSF+S+ VYP I+I++ E D R+D +RASG GGQHVN T SA+RI Sbjct: 151 ISPFDSSGRRHTSFASVDVYPDAGLDIDIDVKEEDLRVDVFRASGPGGQHVNKTSSAIRI 210 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VVQCQ E+SQH+N+ A +L+A+LY+LEL+K + SK IG+G QI Sbjct: 211 THLPTGIVVQCQNEKSQHRNRESAMKVLKARLYDLELKKIQAEKQENYDSKNAIGFGSQI 270 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y +QPYQ+VKD RT +E V+DG+LD F++ L Sbjct: 271 RTYTMQPYQLVKDHRTGVEVGDVGAVMDGELDKFIRGYL 309 >gi|220910508|ref|YP_002485819.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425] gi|219867119|gb|ACL47458.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425] Length = 361 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 155/340 (45%), Positives = 225/340 (66%), Gaps = 2/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD ++S L P+ W + A++ ++E L + + + Q L D + Sbjct: 14 IFDVPALQAKISDLEQVAAQPNFWDDQATAQVTLQELNELKSHLEQLHRWQATLSDAVAA 73 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LEL E D S+LQE SDNL+++ ++ + E LLSG D N A L ++AGAGGT++QD Sbjct: 74 LELVELEPDESLLQEASDNLKQLDQQLSQWELEQLLSGTYDRNGAVLTINAGAGGTDAQD 133 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRWAE+ +K E+ +G+EAGIKSATL I G AYG+L+ E+G HRLVR Sbjct: 134 WAEMLLRMYTRWAEQHGYKVHLAELSEGDEAGIKSATLEIDGRYAYGYLRSEKGTHRLVR 193 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V P +D S+++EI + D I T R+ G GGQ+VN ++AVRI Sbjct: 194 ISPFNANGKRQTSFAGVEVMPQLDHSVQLEIPDKDLEITTSRSGGKGGQNVNKVETAVRI 253 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQ 311 H+PTG+ V+C QERSQ +NK +A +L+AKL + + QK +EIA+I E WG Q Sbjct: 254 VHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIIAQEQKAQEIADI-RGDAVEAAWGTQ 312 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PY++VKD+RT +E + V++G+LD+F++A L Sbjct: 313 IRNYVFDPYKLVKDVRTGVETQAIEVVMNGELDEFIQAYL 352 >gi|332703829|ref|ZP_08423917.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis Bay] gi|332553978|gb|EGJ51022.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis Bay] Length = 368 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 153/343 (44%), Positives = 217/343 (63%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 L G D D +RL + P W +++E++ + + + + + Sbjct: 20 SLWGRLDHDRDNERLRQIEDALSRPGAWDKPDRLTPMLQEKRQISEKLERLTVLHKTRQE 79 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L+LA E+ +L S+ L ++ ++ + +L+G D N A +E+H+GAGGT Sbjct: 80 VEEWLDLAREDQTQEVLAILSEQLDVLQERLKDVELREMLAGPEDQNSAIMEIHSGAGGT 139 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA MLLRMY RW+E++ +K L+ +GEEAG KS T+ ++G AYG LKGE G+H Sbjct: 140 EAQDWAEMLLRMYRRWSERQGYKVSILDFLEGEEAGFKSVTVQVEGLYAYGMLKGESGIH 199 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RL+RISP+D++ RRHTSF+S+ VYP V I+I++ E D RID +RASGAGGQHVN T+S Sbjct: 200 RLIRISPFDTSGRRHTSFASVAVYPDVGTDIDIDVREEDLRIDVFRASGAGGQHVNKTES 259 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTGVV QCQ E+SQ +NK A +L+A+LYELEL+K SK I W Sbjct: 260 AVRITHLPTGVVAQCQNEKSQLRNKETALKILKARLYELELKKIAAARQAEYESKDTIAW 319 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIR+Y LQPY++VKD RT +E VL+G++D ++ L Sbjct: 320 GSQIRTYTLQPYRLVKDHRTGMEIGDVEAVLNGEIDPLIRNFL 362 >gi|306829186|ref|ZP_07462376.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249] gi|304428272|gb|EFM31362.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249] Length = 325 Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 158/323 (48%), Positives = 209/323 (64%), Gaps = 8/323 (2%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAI-SFIK--EIQDRLCDNLILLELALEEDDCSILQET 88 +P W + I A+ +E L N +F K E+QD + ILL+ E D S+ E Sbjct: 3 EPDFWNDNIAAQKTSQELNELKNTYNTFCKMEELQDEVE---ILLDFLAE--DESVHDEL 57 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 58 VEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAK 117 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S Sbjct: 118 GFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTS 177 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+ Sbjct: 178 VEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRT 237 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT Sbjct: 238 QYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRT 297 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 + E V+DGDLD F+ A L Sbjct: 298 SFEVAQVDKVMDGDLDGFIDAYL 320 >gi|148985895|ref|ZP_01818989.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71] gi|148989834|ref|ZP_01821128.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73] gi|149007634|ref|ZP_01831251.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74] gi|149020396|ref|ZP_01835288.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72] gi|147760789|gb|EDK67760.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74] gi|147922041|gb|EDK73165.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71] gi|147924776|gb|EDK75860.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73] gi|147930698|gb|EDK81680.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72] gi|301799772|emb|CBW32341.1| peptide chain release factor 2 [Streptococcus pneumoniae OXC141] gi|332077171|gb|EGI87633.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545] gi|332203909|gb|EGJ17976.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368] Length = 325 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L N + ++++ + ILL+ E D S+ E Sbjct: 3 EPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELVAQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|187250476|ref|YP_001874958.1| peptide chain release factor 2 [Elusimicrobium minutum Pei191] gi|186970636|gb|ACC97621.1| Peptide chain release factor 2 [Elusimicrobium minutum Pei191] Length = 371 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 164/350 (46%), Positives = 224/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS ++ G L ++L+ L + W + A+ + +E + + Sbjct: 15 ELSARIKNAGALIRVGEKKEKLAKLEAEISKESFWNDSDNARQVSKEADAVKTELETFSA 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D + E+ALEE+ + + E S L +I+ E++ +F+ LS AD +A + + Sbjct: 75 LQKEMDDAVTYYEMALEENSETEMGEISSFLIKIENELKEIEFKIKLSDPADRLNAIMHI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA MLLRMYTRWAE K + +I GEEAG+KS +L+I+G AYG+L Sbjct: 135 HAGAGGTESCDWAQMLLRMYTRWAENHGLKVKITDILPGEEAGVKSVSLMIEGLYAYGYL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+NSRRHTSF+S V P ++D I+IEI E D +DT+R+ GAGGQ Sbjct: 195 KSENGVHRLVRISPFDANSRRHTSFASCDVLPDIEDEIKIEIEEKDLEVDTFRSGGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI HIPTG+VV CQ ERSQ +N+ A MLRAKLY++E K+ Sbjct: 255 NVNKVETAVRIKHIPTGIVVACQIERSQLQNRQTAMKMLRAKLYQIEADKKRSEMEKHYG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV PYQ+VKDLRT E + V+DGDLD FM++ L Sbjct: 315 QKGDIAWGHQIRSYVFMPYQLVKDLRTGYETSQVQAVMDGDLDAFMQSYL 364 >gi|329116145|ref|ZP_08244862.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020] gi|326906550|gb|EGE53464.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020] Length = 327 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 152/320 (47%), Positives = 212/320 (66%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L ++Q+ + + LE+ L+EDD S+ +E + Sbjct: 3 EPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEM-LDEDD-SLQEELEAS 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + FK Sbjct: 61 LEKLDQILSSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ E N + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DG +D F+ A L Sbjct: 301 VAQVDKVMDGFIDGFIDAYL 320 >gi|317063162|ref|ZP_07927647.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185] gi|313688838|gb|EFS25673.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185] Length = 328 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 218/322 (67%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 T + + W + + +++E ++ K+++ + + +L++ +E + E Sbjct: 2 TMEENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDF-VEMGEADFQTELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++++ LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW ++K Sbjct: 61 EKHMILGKDIDHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEKK 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K ++ G+ GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S+ Sbjct: 121 YKISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VD+S+E+ I D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERSQ Sbjct: 181 EVMPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL ELE++K+EE + ++EIGWG QIRSYV QPY +VKD RT+ Sbjct: 241 LNNRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGNQIRSYVFQPYTLVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + V+DGD+D F+ L Sbjct: 301 AESGNIKAVMDGDIDIFINTYL 322 >gi|239907246|ref|YP_002953987.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1] gi|239797112|dbj|BAH76101.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1] Length = 285 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 143/277 (51%), Positives = 194/277 (70%), Gaps = 3/277 (1%) Query: 77 LEEDDCS--ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +DD S IL ++ + ++ E+ + + G D+ DA LE+H GAGGTE+QDWA Sbjct: 1 MAKDDGSPEILDALAEQIDTLRSELADAELAAFF-GPEDNADAILEIHPGAGGTEAQDWA 59 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RWAE+++F + L+ G+EAG+KS TL I GP AYG L E+G+HRL+RIS Sbjct: 60 EMLLRMYRRWAERKRFDVKMLDFLPGDEAGVKSVTLQISGPYAYGLLAVEKGIHRLIRIS 119 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS+ RRHTSF+S+ VYP I+IE+ E D R+D +RASG GGQHVN T SA+RITH Sbjct: 120 PFDSSGRRHTSFASVDVYPDAGVDIDIEVKEDDLRVDVFRASGPGGQHVNKTSSAIRITH 179 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PT +VVQCQ E+SQH+N+ A +L+A+LY+LEL+K E SK IG+G QIR+ Sbjct: 180 LPTNIVVQCQNEKSQHRNRETAMKVLKARLYDLELKKLEAEKQESYESKNAIGFGSQIRT 239 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y +QPY++VKD RT ++ VLDGDLD F++ L Sbjct: 240 YTMQPYRLVKDHRTGVDAGDVEAVLDGDLDKFIRGFL 276 >gi|319951472|ref|ZP_08025281.1| peptide chain release factor 2 [Dietzia cinnamea P4] gi|319434864|gb|EFV90175.1| peptide chain release factor 2 [Dietzia cinnamea P4] Length = 368 Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 158/350 (45%), Positives = 221/350 (63%), Gaps = 4/350 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D D +R+ L DP LW + A+ + E ++ + +E+ Sbjct: 12 LDATMTTVEKVLDIDELARRVDELEQMAADPDLWNDQDRAQKVTSELSYIQADLRRCREL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ ELA EE+ ++E ++ +VE + +++LSGE D +A + + Sbjct: 72 RQRIEDLPLMYELA-EEEGGDAVEEADAERASLREDVEAMEVKTMLSGEYDQREAVVNIR 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAEK K E + EEAGIKSAT ++K P YG L Sbjct: 131 AGAGGVDAADFAEMLMRMYVRWAEKNGHKVEVYDTSYAEEAGIKSATFIVKDPYMYGTLS 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ IE+ E++ R+D YR+SG GGQ Sbjct: 191 VEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETVDSIEVPENEVRVDVYRSSGPGGQS 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE +++EE A + Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKL--LERKRQEERAAMDALG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 S WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + Sbjct: 309 SGGNASWGNQMRSYVLHPYQMVKDLRTEHEVNNPSAVLDGDIDGFIEAGI 358 >gi|183603122|ref|ZP_02712622.2| peptide chain release factor 2 [Streptococcus pneumoniae SP195] gi|183573173|gb|EDT93701.1| peptide chain release factor 2 [Streptococcus pneumoniae SP195] Length = 329 Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 153/326 (46%), Positives = 210/326 (64%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ + +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT+ E V+DGDLD F+ A L Sbjct: 299 HRTSYEVAQVDKVMDGDLDGFIDAYL 324 >gi|305679674|ref|ZP_07402484.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC 14266] gi|305660294|gb|EFM49791.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC 14266] Length = 368 Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 155/331 (46%), Positives = 218/331 (65%), Gaps = 5/331 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K DP LW + A+ + E + + ++ ++ RL D I+ ELA EE + + + Sbjct: 35 LAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSLRSRLTDLPIMYELAEEEGEGTDI 94 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + + L ++ +++ + ++LSGE DS +A + + +GAGG ++ DWA ML+RMY RWA Sbjct: 95 AD--EELTDLRADIDALEVTTMLSGEYDSREALINIRSGAGGVDAADWAEMLMRMYIRWA 152 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK+ K E +I EEAGIKSAT ++ G YG L EQGVHRLVRISP+D+ +RR TS Sbjct: 153 EKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLSVEQGVHRLVRISPFDNQARRQTS 212 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+ + V PVV+ + I+I +S+ R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ Sbjct: 213 FAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQN 272 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 E+SQ +NKA A +L+AKL E + Q +R E+ +G WG Q+R+YVL P+QMVK Sbjct: 273 EKSQIQNKASALRVLQAKLLERKRQEERAELDALGAGGNA--SWGNQMRNYVLHPFQMVK 330 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 DLRT E P VLDGDLD F++A + +K Sbjct: 331 DLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361 >gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680] gi|81717933|sp|Q82D82|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis MA-4680] Length = 368 Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 159/355 (44%), Positives = 225/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L +K ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLSVLFEMAEEEDDPDTRAEAESELTAVKKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVETTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL L+ +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LDRRRQEEQAKM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G+++ F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364 >gi|237740205|ref|ZP_04570686.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31] gi|262068161|ref|ZP_06027773.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC 33693] gi|294782698|ref|ZP_06748024.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA] gi|229422222|gb|EEO37269.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31] gi|291378140|gb|EFE85658.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC 33693] gi|294481339|gb|EFG29114.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA] Length = 308 Score = 302 bits (774), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 153/298 (51%), Positives = 211/298 (70%), Gaps = 1/298 (0%) Query: 54 NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 N +S +++ + D +L++ +E + S E + + +K ++E + LL GE D Sbjct: 6 NIVSRYEKLATEVEDEEVLIDF-VESGESSFENELIEKHKTLKYDIEEFEVNLLLDGEYD 64 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ G+KS T L++ Sbjct: 65 MNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVSELDFMEGDSVGVKSVTFLVE 124 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VDD++E+EI+ +D RIDTY Sbjct: 125 GINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDNVEVEINPADIRIDTY 184 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASGAGGQHVN TDSAVRITH PTGVVV CQ+ERSQ N+ A ML++KL E+EL+K+E Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPTGVVVTCQKERSQLSNRETAMKMLKSKLLEIELKKKE 244 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E + +T+IGWG QIRSYV QPY +VKD RTN E + V+DG +DDF+ + L Sbjct: 245 EEMKKIQGEQTDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYL 302 >gi|302325967|gb|ADL25168.1| peptide chain release factor 2 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 389 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 152/345 (44%), Positives = 229/345 (66%), Gaps = 9/345 (2%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD + + L L + DP+LW + +A+ +M++ +L I KE+ + CD+L Sbjct: 42 GGIFDLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWKEVS-QTCDDL 100 Query: 71 I-LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E++ +E+ + ++ +K VE +F+ +L+G D+ + +H GAGGTE Sbjct: 101 AELYEMSKDEESADLTATLESDIADLKSRVEAMEFKKMLNGPDDACACLMSIHPGAGGTE 160 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWA ML RMYT + E+ K + ++ + E+AG+KSAT+ + NAYG L+ E GVHR Sbjct: 161 SQDWALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYGLLRSEIGVHR 220 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+D+N+RRHTSF+++++YP +D +E ++ S+ R+DTYR+SGAGGQ++N TDSA Sbjct: 221 LVRISPFDANARRHTSFTAVYLYPEHED-VEFDLDMSEVRVDTYRSSGAGGQYINKTDSA 279 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLR---AKLYELELQKREEIANIGESSKTEI 306 VR+TH+PTG++ CQ ERSQ +N+ + ML+ A+ Y LE + + + A + E K E Sbjct: 280 VRMTHLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRD-ARMAEKKKVE- 337 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYVLQPYQ+VKDLRT +E + + VLDG + F+ A L Sbjct: 338 -WGSQIRSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 381 >gi|254520266|ref|ZP_05132322.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA] gi|226914015|gb|EEH99216.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA] Length = 325 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 160/321 (49%), Positives = 222/321 (69%), Gaps = 9/321 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS---ILQETSDN 91 W+++ A+ + +E + + + I + + R+ D IL EL E+D+ S +++E Sbjct: 6 FWEDIKRAEEVTKESKRIKDKIDRYESLVSRIEDVEILAELIDEDDEESIDEVIRE---- 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ I+ +VE + E LLSGE D NDA L +HAG GG+++ DW MLLRMYTRW EKR FK Sbjct: 62 IRSIEKDVEGYRIELLLSGEYDRNDAILTLHAGVGGSDANDWTEMLLRMYTRWCEKRGFK 121 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ +G+EAGIKS TL +KG AYG+LK E+GVHRLVRISP+++N +R TSF+S+ V Sbjct: 122 VETLDYLEGDEAGIKSVTLKVKGEFAYGYLKAEKGVHRLVRISPFNANGKRQTSFASVEV 181 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + +IEI D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ ERSQ Sbjct: 182 LPELTKDQDIEIRSEDLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQSERSQFS 241 Query: 272 NKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK A ML++KL +L E +E+I ++ K ++GWG QIRSYV PY MVKD RT Sbjct: 242 NKDTAMAMLKSKLIDLKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYNMVKDHRTGE 300 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + + V++G++D+F+ A L Sbjct: 301 ETANLNAVMNGEIDNFITAYL 321 >gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)] gi|256787399|ref|ZP_05525830.1| peptide chain release factor 2 [Streptomyces lividans TK24] gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24] gi|19864260|sp|Q53915|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)] gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24] Length = 368 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 159/355 (44%), Positives = 224/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|227893185|ref|ZP_04010990.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM 16047] gi|227865051|gb|EEJ72472.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM 16047] Length = 332 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 157/320 (49%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 P W + +A+ L+ + L + SF+K +Q D LEL EE D + +ET ++ Sbjct: 4 PDFWNDQEKAQKLINDNNLLKEKRDSFLK-LQKGYEDVSTALELLREEPDADLQKETEND 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ E + + LLSG+ D+++A LE+H GAGGTE+ DW MLLRMY R+ + FK Sbjct: 63 LANLQEEFHNYELDLLLSGKYDNHNALLEIHPGAGGTEAMDWGQMLLRMYQRYCDSAGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GEEAG+KS + I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 123 FEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P VDDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ + Sbjct: 183 IPEVDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT E Sbjct: 243 NRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG L F+ + L Sbjct: 303 TADVNGVMDGKLQPFIYSYL 322 >gi|300778963|ref|ZP_07088821.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC 35910] gi|300504473|gb|EFK35613.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC 35910] Length = 376 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 221/323 (68%), Gaps = 2/323 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 KT P W N A+ +++ + + EI + D +L + A E+ D +E Sbjct: 42 KTAAPEFWDNPKTAEAFLKQLRSKKKWVESYDEIHTQFEDLQVLADFAKEDPDSE--KEL 99 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++ ++E +F+++LS E D A L++ AGAGGTES DWA+ML+RMYT WAEK+ Sbjct: 100 DETFPQLVEKIEDLEFKNMLSNEGDELSAVLQITAGAGGTESCDWASMLMRMYTMWAEKQ 159 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K L +G+ AG+K+ TL I+G A+G+LKGE GVHRLVRISP+DSN++RHTSF S Sbjct: 160 GYKIRELNFQEGDVAGVKTVTLEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFVS 219 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP+VDD+IEI I+ +D +T RASGAGGQ+VN ++AVR+ H PTG++++ + RS Sbjct: 220 VYVYPLVDDTIEININPADISFETMRASGAGGQNVNKVETAVRLRHAPTGIIIENSESRS 279 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +NK +A +LR++LYE+EL++R + N E++K +I WG QIR+YV+ PY++VKD+R+ Sbjct: 280 QLQNKEKAMQLLRSRLYEMELEERMKARNEIEANKMKIEWGSQIRNYVMHPYKLVKDVRS 339 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 E + V++G++ F+KA L Sbjct: 340 GHETSDVDAVMNGNITPFLKAFL 362 >gi|225621552|ref|YP_002722811.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1] gi|225216373|gb|ACN85107.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1] Length = 312 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 161/309 (52%), Positives = 215/309 (69%), Gaps = 6/309 (1%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYK 102 M+ER L + I ++ + + L+E+A+E +D + +E LQ++ E+E K Sbjct: 1 MKERMLLLDKIEPVENLIKNSNNIYELVEMAIESNDSEMEKELETECLELQKVFDELETK 60 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +L SGE DS +AYL ++AGAGGTES DWA+ML RMY R+ E+ F E + G+E Sbjct: 61 ---NLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDE 117 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIK + ++G AYG+L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IEIE Sbjct: 118 AGIKQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEIE 177 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RIDTYRASGAGGQHVN T SA+RITHIPT +VVQCQ ERSQH NK A ML+A Sbjct: 178 INPADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKA 237 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 KLY+LE +K ++ KT+I WG QIRSYV QPYQMVKDLRT E + + V+DG+ Sbjct: 238 KLYQLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGCESGNMNSVMDGN 297 Query: 343 LDDFMKATL 351 +D+F+ A L Sbjct: 298 IDEFISAYL 306 >gi|46446965|ref|YP_008330.1| peptide chain release factor RF-2 [Candidatus Protochlamydia amoebophila UWE25] gi|46400606|emb|CAF24055.1| probable peptide chain release factor RF-2 [Candidatus Protochlamydia amoebophila UWE25] Length = 326 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 150/317 (47%), Positives = 215/317 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W N +A++++ E + L +E++ + + LL A E ++ S ++E +L Sbjct: 6 FWNNSEQAQLIINECRDLRAWTVPYQELKTKFENCKELLPEAYELNEESFIEELLRDLDS 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 I+ + + + +LSGE D+ D YL +++GAGGTE+ DWA ML RMY RWA K+ +K E Sbjct: 66 IEKVLGDLEVQRMLSGEMDNKDCYLTINSGAGGTEACDWAQMLSRMYQRWAAKKGWKIEI 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ DG+ G+KS TL +G AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ V P Sbjct: 126 IDFVDGDVVGLKSITLRFQGSYAYGYSKAEKGVHRLVRISPFDSNAKRHTSFASVDVSPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + I++EI D R+DT+R+SGAGGQHVN TDSAVR+TH+PTG+VV CQ +RSQ +NK Sbjct: 186 ITTDIQVEIKPEDVRVDTFRSSGAGGQHVNKTDSAVRLTHMPTGIVVSCQTQRSQVQNKE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 + MLR+KLYE+E+ +RE+ N + K E WG QIR+YV QPY +VKD RT E + Sbjct: 246 ACYQMLRSKLYEMEVLEREKALNNLKGEKKENAWGSQIRNYVFQPYTLVKDTRTKAESGN 305 Query: 335 PSDVLDGDLDDFMKATL 351 V+DG+LD+F+ A L Sbjct: 306 IQAVMDGELDEFVNAYL 322 >gi|301801602|emb|CBW34300.1| peptide chain release factor 2 [Streptococcus pneumoniae INV200] Length = 325 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 152/320 (47%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ + +E L N + ++++ + ILL+ E D S+ E Sbjct: 3 EPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELVAQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|302671676|ref|YP_003831636.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus B316] gi|302396149|gb|ADL35054.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus B316] Length = 380 Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 157/331 (47%), Positives = 218/331 (65%), Gaps = 8/331 (2%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE--DDCS 83 L+ + E+P W N +A ++ +++ + ++ I+ + + D + L+++ E DD Sbjct: 37 LSREMEEPGFWDNAEKANKKTKDLKNMQDLVADIERLNSQYTDIIDLIDMQNAEGVDDDD 96 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + E L + ++E + +LL+ D D L ++AGAGGTE+ DWA+ML RMYTR Sbjct: 97 MAAEIRSELDEFEEKLENIRISNLLNQPYDKYDVILRLNAGAGGTEACDWASMLYRMYTR 156 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE++ F TE L++ DG+EAGIKS T I G NAYG LK E GVHRLVRISP+++ ++R Sbjct: 157 WAERKGFTTEVLDLLDGDEAGIKSVTFQISGTNAYGLLKSEHGVHRLVRISPFNAQAKRQ 216 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF S V P +++ ++IEI+ D RIDTYR+SGAGGQH+N T SAVRITHIPTGVVV C Sbjct: 217 TSFVSCDVMPDIEEDLDIEINPDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGVVVAC 276 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPY 320 Q ERSQ +NK +A ML+AKL+ + K+EE A + E+ WG QIRSYVLQPY Sbjct: 277 QNERSQFQNKDKAMQMLKAKLF---IMKQEEQAAKLAGIRGEVMDNAWGSQIRSYVLQPY 333 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MV D RT + ++ VLDG+LD F+ A L Sbjct: 334 TMVNDTRTGFKASNADGVLDGELDPFINAYL 364 >gi|260495130|ref|ZP_05815258.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33] gi|260197187|gb|EEW94706.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33] Length = 331 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 154/322 (47%), Positives = 221/322 (68%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 T + + W + ++ +++ N +S +++ + D +L++ +E + S E S Sbjct: 5 TFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIEDEEVLIDF-VESGETSFESELS 63 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + +K +VE + LL GE D N+A + +H+GAGGTE+ DWA+ML RMY RW R Sbjct: 64 EKHKILKNDVEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLRN 123 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K L+ +G+ G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ Sbjct: 124 YKVTELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASV 183 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VD+++E+EI +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ Sbjct: 184 EVVPEVDENVEVEIDPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQ 243 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL ELE++K+EE + +++IGWG QIRSYV QPY +VKD RTN Sbjct: 244 LSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTN 303 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + V+DG +DDF+ + L Sbjct: 304 TEIGNVKAVMDGSIDDFINSYL 325 >gi|291542843|emb|CBL15953.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus bromii L2-63] Length = 372 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 162/330 (49%), Positives = 220/330 (66%), Gaps = 8/330 (2%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K +P W +V +++ +++ L + + + + D L+ELA EE+D S+L Sbjct: 37 LELKATEPGFWDDVEKSQKVLQRTGSLKGKVEAYEGLVAKYEDTHALIELANEEEDESLL 96 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E ++ +K +E ++ ++LL+GE D N+A L HAG+GGTE+QDWA ML RMYTRWA Sbjct: 97 EEAESEVEAVKENLEKQRLQTLLTGEYDKNNAILTFHAGSGGTEAQDWAEMLYRMYTRWA 156 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E FK + ++ DG+EAG+KSA LL++G NAYG+LK E GVHRLVR+SP+DS RRHTS Sbjct: 157 EAHGFKVKEVDYLDGDEAGLKSAVLLVEGENAYGYLKSEAGVHRLVRVSPFDSAGRRHTS 216 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSS+ V P + E+ I D ++D YRASGAGGQ VN T SAVR+THIPTG+VV Q Sbjct: 217 FSSLEVMPEIAKDTEVHIPPEDIKMDVYRASGAGGQKVNKTSSAVRLTHIPTGIVVASQV 276 Query: 266 ERSQHKNKAQAWNMLRAKLYELE----LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 ERSQ++N+ A NML +KL E++ L+K E+I + + EI WG QIRSYV PY Sbjct: 277 ERSQYQNRDVAMNMLISKLVEIKEREHLEKIEDIKGV----QKEITWGSQIRSYVFMPYT 332 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RT E + V+DGDLD F+ A L Sbjct: 333 MVKDHRTGFETGNIQAVMDGDLDGFINAYL 362 >gi|21282445|ref|NP_645533.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MW2] gi|88194533|ref|YP_499328.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|161509023|ref|YP_001574682.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|21203882|dbj|BAB94581.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MW2] gi|87202091|gb|ABD29901.1| peptide chain release factor 2, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|160367832|gb|ABX28803.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus USA300_TCH1516] Length = 291 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 154/280 (55%), Positives = 200/280 (71%), Gaps = 3/280 (1%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +L EE D + ++ + K +V+ + + LL G D+N+A LE+H GAGGTESQDW Sbjct: 6 DLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDW 65 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRI Sbjct: 66 ANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 125 Query: 194 SPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RI Sbjct: 126 SPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRI 185 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 TH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ E+A I + EIGWG Q Sbjct: 186 THHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEI-RGEQKEIGWGSQ 244 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 245 IRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 284 >gi|113461617|ref|YP_719686.1| peptide chain release factor 2 [Haemophilus somnus 129PT] gi|112823660|gb|ABI25749.1| bacterial peptide chain release factor 2 (bRF-2) [Haemophilus somnus 129PT] Length = 260 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 149/249 (59%), Positives = 192/249 (77%), Gaps = 1/249 (0%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ G+ Sbjct: 9 EFRRMFSGQHDNCDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELVEVSSGDV 68 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AG+KSAT+ I G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD IEIE Sbjct: 69 AGLKSATIRIAGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIEIE 128 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+NK QA L+A Sbjct: 129 INPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKA 188 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 KLYE+E+ K+ E SK++IGWG QIRSYVL + +KDLRT +E + VLDGD Sbjct: 189 KLYEMEIMKKNADKQAMEDSKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGD 247 Query: 343 LDDFMKATL 351 LD F++A+L Sbjct: 248 LDRFIEASL 256 >gi|111658353|ref|ZP_01409041.1| hypothetical protein SpneT_02000493 [Streptococcus pneumoniae TIGR4] gi|148997169|ref|ZP_01824823.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70] gi|149010619|ref|ZP_01831990.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75] gi|221231551|ref|YP_002510703.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC 700669] gi|298502540|ref|YP_003724480.1| peptide chain release factor RF2 [Streptococcus pneumoniae TCH8431/19A] gi|147756869|gb|EDK63909.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70] gi|147765100|gb|EDK72029.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75] gi|220674011|emb|CAR68524.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC 700669] gi|298238135|gb|ADI69266.1| peptide chain release factor RF2 [Streptococcus pneumoniae TCH8431/19A] gi|301793914|emb|CBW36310.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104] gi|327390112|gb|EGE88455.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375] gi|332076034|gb|EGI86500.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301] gi|332202619|gb|EGJ16688.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317] gi|332204764|gb|EGJ18829.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901] Length = 325 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 153/320 (47%), Positives = 206/320 (64%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L N + ++++ + ILL+ E D S+ E Sbjct: 3 EPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELVAQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|325684476|gb|EGD26640.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 332 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 200/320 (62%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N +A+ L+ E L ++ L D LEL E D + ++T D Sbjct: 3 EPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTEDQ 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L +++ E + LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R K Sbjct: 63 LAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRGLK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E G+EAG+KS ++ I G N YG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 123 FEVNNFEPGDEAGLKSVSVRISGKNTYGLLKSEHGVHRLVRISPFDSAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P VDDSIEI+I D RID YR+SGAGGQH+N T SAVRITHIPTG+V Q +RSQ + Sbjct: 183 IPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQFQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A N +RAKL+ LE +K+ + + + +I WG QIRSYV PY MVKD RT E Sbjct: 243 NRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTGYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DG LD F+ A L Sbjct: 303 TADVGGVMDGKLDPFIYAYL 322 >gi|134097701|ref|YP_001103362.1| putative peptide chain release factor 2 [Saccharopolyspora erythraea NRRL 2338] gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora erythraea NRRL 2338] gi|166225115|sp|A4F8R2|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora erythraea NRRL 2338] Length = 367 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 155/350 (44%), Positives = 222/350 (63%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS L + + D D +++ L + P LW +V A+ + + H + + IK+ Sbjct: 11 ELSTTLEGIESVMDLDALRAKIAELEEEAARPDLWDDVEHAQRVSSQLVHRQSELRKIKD 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D +L EL+ +E D S L E ++K ++E + +LLSG+ D +A + + Sbjct: 71 LRQRVEDLEVLYELSEDEGDDSGLAEADSERTKLKKDLEALEVRTLLSGDYDQREAVVTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 A AGG ++ D+A ML+RMY RWAE+ ++ E + EEAG+KSAT + P AYG L Sbjct: 131 RAEAGGVDAADFAEMLMRMYVRWAERHEYPVEVYDTSYAEEAGLKSATFRVNAPYAYGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ +EI E D R+D +R+SG GGQ Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVEIPEKDIRVDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A +L++KL L +K +E A + Sbjct: 251 SVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAALRVLQSKL--LAKKKEQERAELDAL 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVL PYQMVKDLRT E +P VLDG +D F++A + Sbjct: 309 KDSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPDAVLDGQIDGFLEAGI 358 >gi|76798117|ref|ZP_00780371.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21] gi|77405443|ref|ZP_00782536.1| peptide chain release factor 2 [Streptococcus agalactiae H36B] gi|77408934|ref|ZP_00785658.1| peptide chain release factor 2 [Streptococcus agalactiae COH1] gi|77411593|ref|ZP_00787935.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111] gi|209559087|ref|YP_002285559.1| peptide chain release factor 2 [Streptococcus pyogenes NZ131] gi|76586525|gb|EAO63029.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21] gi|77162378|gb|EAO73347.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111] gi|77172476|gb|EAO75621.1| peptide chain release factor 2 [Streptococcus agalactiae COH1] gi|77175936|gb|EAO78712.1| peptide chain release factor 2 [Streptococcus agalactiae H36B] gi|209540288|gb|ACI60864.1| Peptide chain release factor 2 [Streptococcus pyogenes NZ131] Length = 326 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 211/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L +Q+ + +LLE+ L+EDD S+ +E +N Sbjct: 3 EPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDEDD-SLKEELEEN 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + LLS D N+A LE+H G+GGTE+QDW ++LLRMYTR+ FK Sbjct: 61 LMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RTN E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DG+++ F+ A L Sbjct: 301 LAQVDKVMDGEINGFIDAYL 320 >gi|223558105|gb|ACM91108.1| peptide chain release factor 2 [uncultured bacterium Rlip2] Length = 330 Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 166/322 (51%), Positives = 219/322 (68%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A+ L +E L + + + D + L E+ +EE D + + Sbjct: 4 PDFWDDAEAAQALNQELADLKGGVDTYNALVAKTDDLMTLWEMGMEEKDEGVEADVKAEY 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +K E+ + E LLSGE D+N+AYLE+HAGAGGTE+QDW MLLRMY RWAE+ F Sbjct: 64 DSLKNELRSLELELLLSGEYDANNAYLELHAGAGGTEAQDWTQMLLRMYGRWAERHGFSV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L++ G+EAG+KS L +KG NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+ V Sbjct: 124 ETLDLQPGDEAGVKSVMLFVKGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSACDVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P ++D+ E+EI D R+DTYR+SGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ +N Sbjct: 184 PEMEDAKEVEIDMDDVRVDTYRSSGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQIQN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + MLRAKL+ELE +K+EE E + +I WG QIRSYV QPY MVKD RT E Sbjct: 244 REVCLRMLRAKLFELEEKKKEEERAKLEGVQQKIEWGSQIRSYVFQPYTMVKDHRTGEET 303 Query: 333 TSPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+++ LA K Sbjct: 304 GNVQAVMDGEIDPFIESFLAAK 325 >gi|28896314|ref|NP_802664.1| peptide chain release factor 2 [Streptococcus pyogenes SSI-1] gi|28811565|dbj|BAC64497.1| putative peptide chain release factor 2 [Streptococcus pyogenes SSI-1] Length = 337 Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 151/331 (45%), Positives = 213/331 (64%), Gaps = 2/331 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + ++ L +P W + I A+ +E L +Q+ + +LLE+ L+ED Sbjct: 3 EEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDED 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + +E +NL ++ + LLS D N+A LE+H G+GGTE+QDW ++LLRM Sbjct: 62 DF-LKEELEENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRM 120 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 121 YTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Sbjct: 181 RRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY Sbjct: 241 VSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY 300 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E V+DG+++ F+ A L Sbjct: 301 TMVKDHRTNFELAQVDKVMDGEINGFIDAYL 331 >gi|168185950|ref|ZP_02620585.1| peptide chain release factor 2 [Clostridium botulinum C str. Eklund] gi|169295927|gb|EDS78060.1| peptide chain release factor 2 [Clostridium botulinum C str. Eklund] Length = 326 Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 145/242 (59%), Positives = 187/242 (77%), Gaps = 2/242 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 LLSGE D N+A + +H+GAGGT++QDW MLLRMYTRWAEK+ +K + ++I G+EAGIK Sbjct: 78 LLSGEYDKNNAIVSLHSGAGGTDAQDWTEMLLRMYTRWAEKKGYKVDTIDILPGDEAGIK 137 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SA+L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ V P + ++ +IEI Sbjct: 138 SASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASLEVIPELRENQDIEIKAD 197 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+DTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ +NK A +ML++KL E Sbjct: 198 DLRVDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQFQNKDTAMSMLKSKLIE 257 Query: 287 L-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L E +E+I ++ K EIGWG QIRSYV QPY MVKD RTN E + V+DGD+D+ Sbjct: 258 LKERAHKEKIEDLSGDLK-EIGWGSQIRSYVFQPYTMVKDHRTNTEMGNVDAVMDGDIDN 316 Query: 346 FM 347 F+ Sbjct: 317 FI 318 >gi|195973766|gb|ACG63448.1| peptide chain release factor 2 [Francisella philomiragia] Length = 294 Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 155/287 (54%), Positives = 205/287 (71%), Gaps = 2/287 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L R++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWNNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288 >gi|6469929|gb|AAF13494.1|AF130466_1 peptide chain release factor 2 [Campylobacter jejuni] Length = 269 Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 151/245 (61%), Positives = 186/245 (75%), Gaps = 2/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 LLSGE D +A + +H GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K Sbjct: 21 LLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLK 80 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 + L+KG NAYG+LK E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E Sbjct: 81 DVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEK 140 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYE Sbjct: 141 DIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYE 200 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LEL K+++ AN GE K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ Sbjct: 201 LELMKQQDSANTGE--KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKM 258 Query: 347 MKATL 351 ++ L Sbjct: 259 IEGVL 263 >gi|55821157|ref|YP_139599.1| peptide chain release factor 2 [Streptococcus thermophilus LMG 18311] gi|55823068|ref|YP_141509.1| peptide chain release factor 2 [Streptococcus thermophilus CNRZ1066] gi|116627872|ref|YP_820491.1| peptide chain release factor 2 [Streptococcus thermophilus LMD-9] gi|55737142|gb|AAV60784.1| peptide chain release factor 2 [Streptococcus thermophilus LMG 18311] gi|55739053|gb|AAV62694.1| peptide chain release factor 2 [Streptococcus thermophilus CNRZ1066] gi|116101149|gb|ABJ66295.1| bacterial peptide chain release factor 2 (bRF-2) [Streptococcus thermophilus LMD-9] Length = 337 Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 152/329 (46%), Positives = 209/329 (63%), Gaps = 2/329 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L + +P W + I A+ +E L +++ + + LE+ LEEDD Sbjct: 5 IALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEM-LEEDDS 63 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 + + K+ Y + LLS D N+A LE+H G+GGTE+QDWA MLLRMY Sbjct: 64 VQEELEETLEKLDKIMTSY-EMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLLRMYQ 122 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RR Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV Sbjct: 183 HTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV PY M Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RT E V+DGD++ F+ A L Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIEGFIDAYL 331 >gi|195973770|gb|ACG63450.1| peptide chain release factor 2 [Francisella philomiragia] Length = 294 Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 155/287 (54%), Positives = 205/287 (71%), Gaps = 2/287 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L R++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288 >gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC 33331] Length = 368 Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 158/355 (44%), Positives = 224/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRVDIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D L E L+ ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAEDEGDADALAEAESELESVRKALDEMEVRTLLSGEYDAREALVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAERHNYKTEVYETAYAEEAGIKSTTFAVEVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + +EI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMN-AL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364 >gi|149177843|ref|ZP_01856442.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797] gi|148843333|gb|EDL57697.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797] Length = 331 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 152/319 (47%), Positives = 215/319 (67%), Gaps = 2/319 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W N +A+ L+ E Q + + + ++ + D +L+E EE + E S +R Sbjct: 6 FWDNQEKAQGLVNEMQQIQLVVKPLTQLVEGAEDLEVLIEFIEEEGSEDSIPELSATAER 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ +E+ + ++++S D + AYL + AG GGT+S DWA MLLRMY RW E+R F E Sbjct: 66 LESILEHLELQAMMSAPEDGSAAYLSIQAGEGGTDSSDWAEMLLRMYLRWCERRGFNVEL 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+ D EEAGI+SAT+ I+G AYG+LKGE G HRL+RISP+DS RRHTSF+++ V P Sbjct: 126 LDRSDAEEAGIRSATIRIEGDYAYGYLKGETGNHRLIRISPFDSAGRRHTSFAAVDVSPD 185 Query: 215 VDDSIEIEIS-ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 + + EIEIS + D R DTYRASGAGGQH+N TDSA+R+TH+ + VVVQCQ RSQHKN+ Sbjct: 186 MGEVAEIEISWDQDVREDTYRASGAGGQHINKTDSAIRLTHLESNVVVQCQNNRSQHKNR 245 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-IRSYVLQPYQMVKDLRTNIEK 332 A+A ML++KL+++E +KR+ K++IG+G Q +R+YVL P Q VKD RT + Sbjct: 246 AEARKMLKSKLFQIEQEKRDAELAAKRGGKSKIGFGGQTVRNYVLHPDQYVKDARTGFKA 305 Query: 333 TSPSDVLDGDLDDFMKATL 351 +P +LDGDLD F++A L Sbjct: 306 GNPGPILDGDLDGFLEAFL 324 >gi|226365870|ref|YP_002783653.1| peptide chain release factor 2 [Rhodococcus opacus B4] gi|254790919|sp|C1B1L3|RF2_RHOOB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226244360|dbj|BAH54708.1| peptide chain release factor 2 [Rhodococcus opacus B4] Length = 368 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 227/352 (64%), Gaps = 6/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + + H + ++E Sbjct: 11 ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L ELA E++ + + ++ ++ + +++LSGE D DA + + Sbjct: 71 LRTRLDDMPVLYELA-EDEGAEAIADADAERHSLREDIAAMEVKTMLSGEYDERDALVNI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK + E + EEAGIKSAT +K P +YG L Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+++E+D R+D YR+SG GGQ Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE++++EE A + ++ Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LEVKRKEERAEM-DA 306 Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F+++ + Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSSVLDGDIDGFLESGI 358 >gi|148992417|ref|ZP_01822112.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68] gi|147928734|gb|EDK79747.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68] gi|332073119|gb|EGI83598.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570] Length = 325 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 152/320 (47%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ + +E L N + ++++ + ILL+ E D S+ E Sbjct: 3 EPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELVAQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|229821252|ref|YP_002882778.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333] gi|259585260|sp|C5BYB6|RF2_BEUC1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229567165|gb|ACQ81016.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333] Length = 374 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 151/345 (43%), Positives = 220/345 (63%), Gaps = 1/345 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + + D D R++ L+ P LW + A+ + H + + + ++ R+ Sbjct: 16 LEQITAVTDPDALRARIAELSEAAAAPDLWDDPDAAQKVTSRLSHTQSELERLDTLRSRI 75 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L++LA EEDD L E L +I+ + + +LL+GE DS +A + + +GAG Sbjct: 76 DDLETLVQLAAEEDDADTLAEAEAELTKIRTSMGELEVRTLLAGEYDSREAVVTIRSGAG 135 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A MLLRMY RWAE++ + T+ L+ EEAG+KSAT +K P A+G L E G Sbjct: 136 GVDAADFAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKVPYAFGTLSVEAG 195 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG GGQ VNTT Sbjct: 196 THRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDIPETDIRIDVFRSSGPGGQSVNTT 255 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L +Q+ E + + Sbjct: 256 DSAVRITHLPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LAMQEEENAKKKELAGDVKA 314 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVLQPYQMVKDLRT E +PS V DGD+DDF++A + Sbjct: 315 SWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGI 359 >gi|195973764|gb|ACG63447.1| peptide chain release factor 2 [Francisella philomiragia] Length = 294 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 154/287 (53%), Positives = 205/287 (71%), Gaps = 2/287 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L R++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQEVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL ++G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288 >gi|12321742|gb|AAG50902.1|AC069159_3 peptide chain release factor 2, putative [Arabidopsis thaliana] Length = 524 Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 157/361 (43%), Positives = 212/361 (58%), Gaps = 29/361 (8%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 W + RL L+ + LW + A + RE L + + + L +++ +L Sbjct: 130 LQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDML 189 Query: 74 ELALEEDD-----CSILQETSDNLQRIKLEVEY-----------------------KQFE 105 +LA EE+D +L S L V K+ E Sbjct: 190 KLAKEENDSELESVGVLALISQTLGMFSFSVSVSLGMINPKETLKALIDMRRVSKEKELE 249 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLS + D Y+EV AGAGGTES DWA M++ MY WA++RKF ++ GE AGI Sbjct: 250 ALLSADNDPCSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGI 309 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEIS 224 K AT+ + G AYG+ K E GVHRLVRISP+DS RRHTSF+++ V P++ D S +EI+ Sbjct: 310 KRATIKVNGEYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEIN 369 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +SD RI+ +R+ GAGGQH NTTDSAVRI HIPTG+ CQ ERSQH NKA A +L+++L Sbjct: 370 DSDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRL 429 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +LE+ ++ + S TEI WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD Sbjct: 430 DQLEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 489 Query: 345 D 345 + Sbjct: 490 E 490 >gi|111023366|ref|YP_706338.1| peptide chain release factor 2 [Rhodococcus jostii RHA1] gi|123339715|sp|Q0S2Q6|RF2_RHOSR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|110822896|gb|ABG98180.1| peptide chain release factor RF2 [Rhodococcus jostii RHA1] Length = 368 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 155/352 (44%), Positives = 227/352 (64%), Gaps = 6/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + + H + ++E Sbjct: 11 ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L ELA E++ + + ++ ++ + +++LSGE D DA + + Sbjct: 71 LRTRLDDMPVLYELA-EDEGADAIADADAERHSLREDIAAMEVKTMLSGEYDERDALVNI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK + E + EEAGIKSAT +K P +YG L Sbjct: 130 RSGAGGVDAADWAEMLMRMYVRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+++E+D R+D YR+SG GGQ Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE++++EE A + ++ Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LEVKRKEERAEM-DA 306 Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F+++ + Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLESGI 358 >gi|299529204|ref|ZP_07042649.1| peptide chain release factor 2 [Comamonas testosteroni S44] gi|298722827|gb|EFI63739.1| peptide chain release factor 2 [Comamonas testosteroni S44] Length = 248 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 144/245 (58%), Positives = 187/245 (76%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + GEAD + ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK E G+ AGIK Sbjct: 1 MFGGEADPLNCFIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYG L+ E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIEI I+ S Sbjct: 61 SATIKVEGEYAYGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ Sbjct: 121 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYD 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR E E +KT++GWG QIRSYVL + +KDLRTN+E ++ VLDGDLD F Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|257468914|ref|ZP_05633008.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185] Length = 326 Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 148/320 (46%), Positives = 217/320 (67%), Gaps = 1/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 + + W + + +++E ++ K+++ + + +L++ +E + E + Sbjct: 2 EENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDF-VEMGEADFQTELEEK 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + ++++ LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW ++K+K Sbjct: 61 HMILGKDIDHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEKKYK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 ++ G+ GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S+ V Sbjct: 121 ISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSFASVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P VD+S+E+ I D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERSQ Sbjct: 181 MPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERSQLN 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML++KL ELE++K+EE + ++EIGWG QIRSYV QPY +VKD RT+ E Sbjct: 241 NRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGNQIRSYVFQPYTLVKDHRTSAE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DGD+D F+ L Sbjct: 301 SGNIKAVMDGDIDIFINTYL 320 >gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor] Length = 368 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 158/355 (44%), Positives = 224/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQEEQAKM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG ++RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNRVRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|77413702|ref|ZP_00789885.1| peptide chain release factor 2 [Streptococcus agalactiae 515] gi|77160247|gb|EAO71375.1| peptide chain release factor 2 [Streptococcus agalactiae 515] Length = 326 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 211/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L +Q+ + +LLE+ L+EDD S+ +E +N Sbjct: 3 EPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDEDD-SLKEELEEN 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + LLS D N+A LE+H G+GGTE+QDW ++LLRMYTR+ FK Sbjct: 61 LMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVEVRDYDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RTN E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DG+++ F+ A L Sbjct: 301 LAQVDKVMDGEINGFIDAYL 320 >gi|195973762|gb|ACG63446.1| peptide chain release factor 2 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|195973768|gb|ACG63449.1| peptide chain release factor 2 [Francisella philomiragia] Length = 294 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 154/287 (53%), Positives = 205/287 (71%), Gaps = 2/287 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L R++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL ++G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288 >gi|78187873|ref|YP_375916.1| peptide chain release factor 2 [Chlorobium luteolum DSM 273] gi|78167775|gb|ABB24873.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium luteolum DSM 273] Length = 363 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 150/345 (43%), Positives = 224/345 (64%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 N GG+FD D +++ L + +P W + A +++E + + +++ + Sbjct: 16 NSYGGIFDVDQRKEKIEDLEKVSGNPEFWNDQKAAHAVLKELNENRSWVEGYEKLAGKAE 75 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L +A E +D S +E + ++ I+ E+ +F+++LSG+ D +A + +HAGAGG Sbjct: 76 SCRDELAIADELEDESFERELTASIDAIEQEIAAIEFKNMLSGKDDPGNAIITIHAGAGG 135 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK E GV Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKVYTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGV 195 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SP+DSN+RRHTSF+S++ YP +EIE+ + D + T+R+ G GGQ+VN + Sbjct: 196 HRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVE 255 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVRI HIP+G+VV CQQERSQ +N+ +A ML A+LY+ + ++ + E K +I Sbjct: 256 TAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREVEGKKKKIE 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL + +KD RTN E+ VLDGD+DDFM+ L+ Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDIDDFMEKYLS 359 >gi|86133579|ref|ZP_01052161.1| peptide chain release factor 2 [Polaribacter sp. MED152] gi|85820442|gb|EAQ41589.1| peptide chain release factor 2 [Polaribacter sp. MED152] Length = 367 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 152/351 (43%), Positives = 232/351 (66%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S +++ L + D + ++ KT +P W + A+++M+E + + I Sbjct: 10 ISTRIDKLKSYLEIDKKLIEIANEEEKTANPDFWNDPKAAELVMKELRFKKKWVEDYNTI 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 RL ++LI+ +ED+ + I L +E +F+++LS E DS A +++ Sbjct: 70 I-RLNEDLIVFYEFYKEDEADEKDVVQQYEKTIAL-LEDIEFKNMLSDEGDSLSAVIQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML RMYT W+EK+ FK + L G+ AGIK+ T+ ++G A+GWLK Sbjct: 128 AGAGGTESCDWAEMLFRMYTMWSEKQGFKLKTLNYQAGDAAGIKTVTVEVEGDYAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYPV DDSIEI+I+ +D I T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPVADDSIEIDINPADIEITTARSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH P+G+ + C RSQH N+A A ML+++LYE+ELQK++ + E++ Sbjct: 248 VNKVETKVQLTHKPSGIQISCSNSRSQHDNRATAMQMLKSQLYEIELQKQQAARDDIEAN 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + WG QIR+YV+ PY++VKD+RT E + V+DG+++ F+KA L + Sbjct: 308 KMKNEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMDGNINAFLKAYLML 358 >gi|262203335|ref|YP_003274543.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247] gi|262086682|gb|ACY22650.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247] Length = 371 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 160/354 (45%), Positives = 227/354 (64%), Gaps = 8/354 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R+ L + DP LW + A+ + E H + + E+ Sbjct: 12 LDATLTTVEKVLDLEELRRRIDELEMQASDPDLWNDQEHAQKVTSELSHAQSEFRKVSEL 71 Query: 63 QDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA E D S L + + ++ ++E + +++L+GE D DA + Sbjct: 72 RQRLDDLPVLYELAEAEEGDDRVSALADADADRAALRADIEAMEVKTMLAGEYDQRDALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAG+KSAT +K P YG Sbjct: 132 NIRSGAGGVDAADWALMLMRMYIRWAEQHGYGVEVYDTSYAEEAGLKSATFAVKAPYMYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV + I+I E+D ++D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVQTTDHIDIDENDVKVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A +L+AKL LE +++EE A + Sbjct: 252 GQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQAKL--LERKRQEERAEL- 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ K + G WG Q+RSYVL PYQMVKDLRT +E +PS VLDG+LD F++A + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTGVEDNNPSAVLDGELDKFIEAGI 362 >gi|188586825|ref|YP_001918370.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351512|gb|ACB85782.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus JW/NM-WN-LF] Length = 344 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 170/333 (51%), Positives = 226/333 (67%), Gaps = 3/333 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALE- 78 +RL L + +P W + AK + +ERQ L + IKE+ D L D + +++EL+ E Sbjct: 3 KRLKELEKQMTEPGFWDDQDRAKKVTQERQELKEHLDEIKEL-DELKDEVSVMIELSEED 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + ++E L + + ++ + +++L D N+A + +HAGAGGTESQDW ML Sbjct: 62 ETDGTNMKEIKQALFQFEEQLSEIRLKNMLKDRYDENNAIISLHAGAGGTESQDWVEMLH 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW E R F E L+ G+EAG+KS T+++KG A+G+LK E GVHRLVR+SP+DS Sbjct: 122 RMYIRWMEHRGFNYETLDFLPGDEAGVKSVTMMVKGKYAFGYLKSEAGVHRLVRVSPFDS 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF+S+ V P +DD IEI+I + D +IDTYRASGAGGQHVNTTDSAVRITH PTG Sbjct: 182 SGRRHTSFASMDVVPEIDDDIEIDIKDDDLKIDTYRASGAGGQHVNTTDSAVRITHHPTG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VVQCQ ERSQHKN+ A +L+AKL +E +KR + K EI WG QIRSYV Sbjct: 242 IVVQCQNERSQHKNREVAMKILKAKLAAIEEEKRRQEQEAMRGDKKEIAWGSQIRSYVFH 301 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY MVKD RTN+E+ + VLDG LD F++ L Sbjct: 302 PYTMVKDHRTNLEEGNADAVLDGKLDHFIQEYL 334 >gi|167761288|ref|ZP_02433415.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704] gi|167660954|gb|EDS05084.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704] Length = 312 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 153/306 (50%), Positives = 216/306 (70%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E +HL + I+ + D +L+E+ E++D S+ +E + ++ + E + + Sbjct: 1 MKELKHLKELVETIQNLYASYDDINLLIEMGYEDEDPSMAREIEEEIRGFETSYEELRIQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE D+ +A + +HAGAGGTES DWA+ML RMY+RWAE++ F + L+ DG+ AGI Sbjct: 61 TLLSGEYDACNAIVTIHAGAGGTESCDWASMLYRMYSRWAERKGFTIQVLDYLDGDIAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T + G NAYG+LK E+GVHRLVRISP+++ +R TSF+S V P ++D I+IEI++ Sbjct: 121 KTVTFEVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A ML+ KL Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKVKLQ 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++ Q++ E + EIG+G QIRSYV+QPY MVKD RTN+E ++ V+DG +D Sbjct: 241 LMKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNVENSNVGAVMDGSIDM 300 Query: 346 FMKATL 351 F+ A L Sbjct: 301 FINAYL 306 >gi|195973774|gb|ACG63452.1| peptide chain release factor 2 [Francisella noatunensis] gi|198417115|gb|ACH87844.1| PrfB [Francisella noatunensis subsp. noatunensis] Length = 294 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 154/287 (53%), Positives = 205/287 (71%), Gaps = 2/287 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L R++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGRQKVELENIVHNCEHISETLETLTELLELAEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQH+N TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288 >gi|86143360|ref|ZP_01061762.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217] gi|85830265|gb|EAQ48725.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217] Length = 368 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 152/325 (46%), Positives = 216/325 (66%), Gaps = 2/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 KT DP+ W + EA+ MR + N + ++ D +LLE E D +E Sbjct: 36 KTFDPNFWNDPKEAEQFMRMLREKKNWVKDYEQAVTLTEDLEVLLEFHKEGDASE--EEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ VE +F+++LS E D A L++ AGAGGTES DWA+ML+RMY W+EK Sbjct: 94 DKQYDKVTRLVEAMEFKNMLSDEGDDLSAVLQITAGAGGTESCDWASMLMRMYLMWSEKN 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK + L +G+ AGIK+ TL I+G A+GWLK E GVHRLVRISP+DSN++RHTSF+S Sbjct: 154 GFKVKELNYQEGDVAGIKTVTLEIEGAYAFGWLKSENGVHRLVRISPFDSNAKRHTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP+ DDSIEI+I+ +D D R+SGAGGQ+VN ++ +TH PTG+V+ + RS Sbjct: 214 VYVYPLADDSIEIDINPADISWDFARSSGAGGQNVNKVETKAILTHHPTGIVIHNSETRS 273 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +N+ +A ML+++LYE+EL+KR+ + E+ K I WG QIR+YVL PY+++KD+RT Sbjct: 274 QLENREKAMQMLKSQLYEIELKKRQAARDEIEAEKKSIEWGSQIRNYVLHPYKLIKDVRT 333 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDGDLD+F+KA L + Sbjct: 334 GEETGNTDAVLDGDLDNFLKAYLMM 358 >gi|227877191|ref|ZP_03995265.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01] gi|256848945|ref|ZP_05554379.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US] gi|262045712|ref|ZP_06018676.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US] gi|293380190|ref|ZP_06626272.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1] gi|295692545|ref|YP_003601155.1| peptide chain release factor 2 [Lactobacillus crispatus ST1] gi|227863245|gb|EEJ70690.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01] gi|256714484|gb|EEU29471.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US] gi|260573671|gb|EEX30227.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US] gi|290923234|gb|EFE00155.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1] gi|295030651|emb|CBL50130.1| Peptide chain release factor 2 [Lactobacillus crispatus ST1] Length = 332 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 155/320 (48%), Positives = 205/320 (64%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 P W N +A+ L+ E L + SF+K +Q D +EL EE D + +E + Sbjct: 4 PDFWNNQEKAQKLISETNRLKEKRDSFLK-LQTSYEDETTAVELLREEPDPDLQKEVEAD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + + LLSG+ DS++A +E+H GAGGTE+ DW MLLRMY R+ + FK Sbjct: 63 LATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDTAGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GEEAG+KS + I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 123 FEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P VDDSI+I+I D R+D YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ + Sbjct: 183 IPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT E Sbjct: 243 NRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGHE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DG L F+ + L Sbjct: 303 TADAQGVMDGKLQPFIYSYL 322 >gi|170076819|ref|YP_001733457.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002] gi|169884488|gb|ACA98201.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002] Length = 359 Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 153/341 (44%), Positives = 226/341 (66%), Gaps = 3/341 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD ++ L + P W++ A+ +++E L ++ ++ Q + D + Sbjct: 12 IFDLKTLDAKIFDLEQQAAQPEFWEDQQGAQDILQELTELKGTVAQYQQWQGQFEDAAAI 71 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 EL E +D ++L E +NL ++ E+ + + +LSGE D+ A L ++AGAGGT++QD Sbjct: 72 AELLTEAEDPALLTEAMENLDDLQKELNRWELQQMLSGEYDNLGAVLTINAGAGGTDAQD 131 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRW+EK+ +K EI +G+EAG+KSATL + G A+G+LK E+G HRLVR Sbjct: 132 WAEMLLRMYTRWSEKQGYKVRLAEISEGDEAGLKSATLEVTGRYAFGYLKHEKGTHRLVR 191 Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 ISP+++N +R TSF+ + V P++ D++++++I E D I T RA G GGQ+VN ++AVR Sbjct: 192 ISPFNANGKRQTSFAGVEVMPILGDNAVKVDIPEKDLEITTSRAGGKGGQNVNKVETAVR 251 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310 I H+PTGV V+C QERSQ +NK +A +L+AKL + ++R +EIA I E WG Sbjct: 252 IVHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRAQEIAEI-RGDMVEAAWGN 310 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRTN E T V+DGDLD F++A+L Sbjct: 311 QIRNYVFHPYQMVKDLRTNHETTDVDGVMDGDLDAFIEASL 351 >gi|323126937|gb|ADX24234.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 327 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 210/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ + ++ L + +Q+ + + LE+ LEEDD S+ + + Sbjct: 3 EPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEM-LEEDD-SVKDDLEAS 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ + + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + FK Sbjct: 61 LETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF S+ V Sbjct: 121 VETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ N + K EI WG QIRSYV PY MVKD RTN E Sbjct: 241 NRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGD++ F+ A L Sbjct: 301 VAQVDKVMDGDIEGFIDAYL 320 >gi|193215043|ref|YP_001996242.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC 35110] gi|193088520|gb|ACF13795.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC 35110] Length = 366 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 160/351 (45%), Positives = 228/351 (64%), Gaps = 3/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIKE 61 +S +L+ L G D D + ++ L KT W N A+ +++E H + F+ + Sbjct: 12 ISERLSLLRGFLDIDARLNAIAELEKKTAAEGFWSNQESAQKVLKEISGHREWTEDFL-D 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L LE+A E +D S L E N+ ++ V +F ++LSG D +A L + Sbjct: 71 LEKTLQGEEESLEIAEELEDESYLAEAEKNIDKLDRAVHALEFRNMLSGADDKRNALLTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDWA+ML RMY RWAE+R FK + +G+ AGIK+ATL I+G AYG+L Sbjct: 131 HAGAGGTEAQDWADMLYRMYMRWAERRGFKVFTDDYQEGDGAGIKTATLEIQGDYAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+D+N+RRHTSF+S++ YP D +EIEI + D +DT+R+ G GGQ Sbjct: 191 KAENGVHRLVRVSPFDANARRHTSFASVYAYPEAPDDVEIEIRKEDLEMDTFRSGGKGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI H+P+G+VV CQQERSQ +N+ +A MLR++LY+L+ ++ E E Sbjct: 251 NVNKVETAVRIKHVPSGIVVACQQERSQFQNRERAMKMLRSRLYQLKREEEEAAKLALEG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYVL + +KD RTN E + VLDGD+D F++ LA Sbjct: 311 KKKKIEWGSQIRSYVLDD-RRIKDHRTNHESFNVEAVLDGDIDQFIERYLA 360 >gi|296876160|ref|ZP_06900214.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 15912] gi|312867359|ref|ZP_07727568.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405] gi|296432871|gb|EFH18664.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 15912] gi|311097060|gb|EFQ55295.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405] Length = 336 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 153/331 (46%), Positives = 209/331 (63%), Gaps = 2/331 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + ++ L K +P W + I A+ +E L ++ D ++ ILL+ L ED Sbjct: 3 EEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDF-LAED 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + K Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRM Sbjct: 62 DSVKEELIEKLEELDKRMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRM 120 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+ FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS Sbjct: 121 YTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAK 180 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Sbjct: 181 RRHTSFTSVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V +R+Q+ N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY Sbjct: 241 VASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPY 300 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E V+DGD+D F+ A L Sbjct: 301 TMVKDHRTNYEVAQVDKVMDGDIDGFIDAYL 331 >gi|255994191|ref|ZP_05427326.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989] gi|255993859|gb|EEU03948.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989] Length = 320 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 156/318 (49%), Positives = 216/318 (67%), Gaps = 9/318 (2%) Query: 40 IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL---ALEEDDCSILQETSDNLQRIK 96 + AK+L++E+Q ++ +S E+ + D L + L E+D +L +D + K Sbjct: 1 MAAKILLKEKQEVEVVVSQYDELLLLIDDAKTLQAMVSEGLVEEDMEML--ATDIFK--K 56 Query: 97 LEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 LE Y + + +LL+G+ D +AY+ +H+G+GG+++QDW MLLRMYTRWAE + F+ + Sbjct: 57 LEAGYHKLKVTTLLAGKHDKANAYISIHSGSGGSDAQDWGKMLLRMYTRWAENKGFQIDV 116 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++++ AG KSATLLIKG NAYG+LK E+GVHRLVRISP+DS+SRRHTSF+S+ V P Sbjct: 117 IDLNQNGVAGFKSATLLIKGLNAYGYLKKERGVHRLVRISPFDSSSRRHTSFASVDVIPE 176 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + I+I + D RID +RASGAGGQHVN TDSAVRI H+PT +VV CQ ERSQH NK Sbjct: 177 IKTDKVIKIDDKDLRIDKFRASGAGGQHVNKTDSAVRIIHLPTKIVVTCQNERSQHMNKE 236 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A +ML +KL EL+ ++ +E N +I WG QIRSYV PY+MVKD RT E + Sbjct: 237 AAMHMLISKLMELKEKEHKESINDLTGDYNQITWGSQIRSYVFHPYRMVKDHRTGAEMGN 296 Query: 335 PSDVLDGDLDDFMKATLA 352 V+DGDLD F++ L+ Sbjct: 297 VDAVMDGDLDYFIQMELS 314 >gi|224371835|ref|YP_002605999.1| PrfB [Desulfobacterium autotrophicum HRM2] gi|223694552|gb|ACN17835.1| PrfB [Desulfobacterium autotrophicum HRM2] Length = 329 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 157/317 (49%), Positives = 208/317 (65%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A ++ER + + I +I + D LLELA EE+D + +E L R Sbjct: 7 FWNDPDTATAKLKERTRISDLIETWDKIFAEIEDAETLLELAHEEEDKEVEREVELQLNR 66 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + +V+ +L GE D+ A + ++AGAGGT+SQDW ML RMYTRW +K+ K + Sbjct: 67 LGQKVKKFSVAIMLDGEDDTKSAIVSINAGAGGTDSQDWTEMLFRMYTRWIDKKGLKLQM 126 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIK T + G +YG LK E GVHRLVRISP+++ +R TSF+S++VYP Sbjct: 127 IDYQPGDEAGIKGVTFSVSGEYSYGLLKVESGVHRLVRISPFNAGGKRQTSFASVFVYPE 186 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + D I +EI E D RID YRASGAGGQHVN T SAVRITH+PTGVVVQCQQE SQH+NK Sbjct: 187 LKDEIRVEIDEGDLRIDVYRASGAGGQHVNKTSSAVRITHLPTGVVVQCQQEPSQHRNKE 246 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A +L+++LY+LE +K+ +K +I WG QIRSYVL PY+MVKD RT+ E Sbjct: 247 IAMKVLQSRLYQLEKEKQNRKMQDLHDTKDDIAWGSQIRSYVLHPYRMVKDHRTDYEVGD 306 Query: 335 PSDVLDGDLDDFMKATL 351 VLDGDLD F++ TL Sbjct: 307 VDRVLDGDLDQFIEETL 323 >gi|297194069|ref|ZP_06911467.1| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC 25486] gi|297152097|gb|EDY64812.2| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC 25486] Length = 340 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 160/335 (47%), Positives = 218/335 (65%), Gaps = 5/335 (1%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L + P LW + A+ + + HL + + ++ R+ D IL ELA EDD Sbjct: 5 IAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRGRIDDLEILFELAEAEDDP 64 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 E L+ ++ ++ + +LLSGE D +A + + A AGG ++ D+A L RMY Sbjct: 65 DARAEAEAELESVRKALDEMEVRTLLSGEYDEREALVNIRAEAGGVDAADFAEQLQRMYL 124 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAE+ + TE E EEAGIKS T ++K P AYG L EQG HRLVRISP+D+ RR Sbjct: 125 RWAERHNYGTEVYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVRISPFDNQGRR 184 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TSF+ + V PVV+ + IEI ES+ R+D YRASG GGQ VNTTDSAVR+THIPTG+VV Sbjct: 185 QTSFAGVEVLPVVEKTDHIEIDESELRVDVYRASGPGGQGVNTTDSAVRLTHIPTGIVVS 244 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--WGRQIRSYVLQPY 320 CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ K + G WG Q+RSYVL PY Sbjct: 245 CQNERSQIQNKASAMNVLQAKL--LERRRQEEQARM-DALKGDGGNSWGNQMRSYVLHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QMVKDLRT+ E +P VLDG++D F++A + +K Sbjct: 302 QMVKDLRTDFEVGNPQSVLDGEIDGFLEAGIRWRK 336 >gi|120602348|ref|YP_966748.1| peptide chain release factor 2 [Desulfovibrio vulgaris DP4] gi|120562577|gb|ABM28321.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio vulgaris DP4] Length = 310 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 155/279 (55%), Positives = 197/279 (70%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L LA E++ L+ + + R++ +E + LLSG+ D A LE+H GAGGTE+QD Sbjct: 23 LLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIHPGAGGTEAQD 82 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMY RWA+ +KTE L+ DG+EAGIKS TL I GPNAYG LKGE+G+HRL+R Sbjct: 83 WAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLKGERGIHRLIR 142 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D++ RRHTSF+S+ V P V I+IEI ++D RID +R+SG GGQ VNTT SAVR+ Sbjct: 143 ISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVRV 202 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+V QCQ E+SQH NK A +LR +LYELEL+K EE +K IG+G QI Sbjct: 203 THIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGAKDAIGFGSQI 262 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y LQPY++VKD RTN E VLDG LD ++ L Sbjct: 263 RTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 301 >gi|282875665|ref|ZP_06284536.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135] gi|281295692|gb|EFA88215.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135] gi|329723235|gb|EGG59765.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU144] gi|329736827|gb|EGG73092.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU028] gi|329737925|gb|EGG74149.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU045] Length = 333 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 158/322 (49%), Positives = 221/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ + L + ++ ++ + + D EL EE D + E + Sbjct: 4 DPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIELEEE 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ FK Sbjct: 64 VQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQNGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 184 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++E E+A I + +IGWG QIRSYV PY M+KD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQEQEMAEI-RGEQKDIGWGSQIRSYVFHPYSMIKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DG++ F++A L Sbjct: 303 EETGKVDAVMDGEIGPFIEAYL 324 >gi|160944128|ref|ZP_02091358.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii M21/2] gi|158444804|gb|EDP21808.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii M21/2] gi|295105045|emb|CBL02589.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium prausnitzii SL3/3] Length = 373 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 146/331 (44%), Positives = 212/331 (64%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R+ L P + + +K + E L ++ +++Q D +LE+ EE Sbjct: 32 KRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLYDDAETMLEMLDEEY 91 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D +++ E + + + VE Q ++L+GE D ++A L HAG GGTE+QDWA ML RM Sbjct: 92 DPAMIPEAEEAVNTVGKAVEELQLMTMLNGEYDHSNAILTFHAGTGGTEAQDWAEMLYRM 151 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y +WA+ E L+ DG+EAG+KSA++++KG NAYG LK E GVHRLVR+SP+D+N+ Sbjct: 152 YNKWAQAHGMTVEVLDYQDGDEAGLKSASMMVKGANAYGLLKSENGVHRLVRVSPFDANA 211 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RR TSF+S+ V P +D++I++ I D + YR+SGAGGQH+N T SAVR+ H PTG+V Sbjct: 212 RRQTSFASLEVMPELDNTIQVNIRPEDIEMQVYRSSGAGGQHINKTSSAVRLIHKPTGIV 271 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + EI WG QIRSYV PY Sbjct: 272 VNCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYVFMPY 331 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E + V+DGD+D+F+ A L Sbjct: 332 TMVKDHRTNYETGNVDAVMDGDIDEFIFAYL 362 >gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM 44385] gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii DSM 44385] Length = 379 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 159/360 (44%), Positives = 226/360 (62%), Gaps = 16/360 (4%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D+ ++ L + DP LW + A+ + + H+ I + + Sbjct: 12 LNSTLTTIEKVVDVDDLKDQVRELEAQASDPSLWDDPDHAQQVTSKLSHVQAQIKKVTTL 71 Query: 63 QDRLCDNLILLELA------LEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSN 115 + R+ D ++ ELA + D +E +D+ + ++ E+E + +++LSGE D Sbjct: 72 RQRVDDMPVMYELADDATEAGDTDAADEAREMADSERETLRHEIESLEVQTMLSGEYDER 131 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A + + + AGG ++ DWA ML+RMYTRW E+ K + +I EEAGIKSAT ++ G Sbjct: 132 EAVVNIRSAAGGVDAADWAEMLMRMYTRWTEQHGHKIDVFDISYAEEAGIKSATFIVHGD 191 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 YG L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+ Sbjct: 192 YMYGQLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIDENDVRVDVYRS 251 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L AKL L+ ++ EE Sbjct: 252 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKL--LDRKREEEQ 309 Query: 296 ANI----GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 A + G+ S + WG Q+RSYVL PYQMVKDLRTN E PS VLDGDLD F++A + Sbjct: 310 AEMNALKGDGSNS---WGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGI 366 >gi|33519726|ref|NP_878558.1| peptide chain release factor 2 [Candidatus Blochmannia floridanus] gi|33504071|emb|CAD83332.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia floridanus] Length = 365 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 149/298 (50%), Positives = 206/298 (69%), Gaps = 10/298 (3%) Query: 58 FIKEIQDRLCDNLILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 +K++QD L D L+++ + D I +QE ++ RI ++E Q + S + D Sbjct: 69 MVKDLQD-LSD---LIKIVVHNDSLLINEIQEQLIHIDRILFQLEMCQ---MFSKKYDDC 121 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + Y+++ +G+GGTE+QDWANMLLRMY +W + + F E + G+ +GIKS T+ + GP Sbjct: 122 NCYVDIQSGSGGTEAQDWANMLLRMYLKWIDNKGFNVEIVTESCGDFSGIKSTTIKVIGP 181 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 YGWL+ E G+HRLVR SP+D+ +RHTSF+S++VYP +DD+I+I+I D RID YRA Sbjct: 182 YVYGWLRTESGIHRLVRKSPFDATGKRHTSFASVFVYPELDDNIDIQIRPEDLRIDVYRA 241 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLY EL K+ Sbjct: 242 SGAGGQHVNRTESAVRITHIPTNIVTQCQSDRSQHKNKNQAIKQLKAKLYNFELHKKRIE 301 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 I E+ K +I WG QIRSYVL + +KDLRT +EK + VL+GDLDDF+K ++ + Sbjct: 302 KKIRENKKKDITWGNQIRSYVLD-HSRIKDLRTGLEKHNVKAVLNGDLDDFIKTSIKV 358 >gi|290580262|ref|YP_003484654.1| putative peptide chain release factor [Streptococcus mutans NN2025] gi|254997161|dbj|BAH87762.1| putative peptide chain release factor [Streptococcus mutans NN2025] Length = 325 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 211/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L +Q+ L D LL+ LEEDD S+ E ++ Sbjct: 3 EPDFWDDNIAAQKTSQELNELKLKYETFNSMQE-LSDETELLQEMLEEDD-SLQGELEED 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + L+ G+EAGIKS L +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VDVLDYQAGDEAGIKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIP+G+VV +R+Q+ Sbjct: 181 MPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + + K EI WG QIRSYV PY MVKD RTN E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG+LD F+ A L Sbjct: 301 VSQVDRVMDGELDGFIDAFL 320 >gi|322516704|ref|ZP_08069613.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC 49124] gi|322124737|gb|EFX96175.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC 49124] Length = 337 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 151/329 (45%), Positives = 210/329 (63%), Gaps = 2/329 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L + +P W + I A+ ++ L +Q+ + + LE+ LEEDD Sbjct: 5 IALLENRMTEPDFWNDNIAAQKTSQDLNELKMKYETFNNMQELSDETELYLEM-LEEDDS 63 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 + + K+ Y + LLS D ++A LE+H G+GGTE+QDWA+MLLRMY Sbjct: 64 IQEELEETLEKLDKIMTSY-EMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLLRMYQ 122 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RR Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV Sbjct: 183 HTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV PY M Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RT E V+DGD++ F+ A L Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIEGFIDAYL 331 >gi|322372865|ref|ZP_08047401.1| peptide chain release factor 2 [Streptococcus sp. C150] gi|321277907|gb|EFX54976.1| peptide chain release factor 2 [Streptococcus sp. C150] Length = 337 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 151/329 (45%), Positives = 209/329 (63%), Gaps = 2/329 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L + +P W + I A+ +E L +Q+ + + LE+ LEED Sbjct: 5 IALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEM-LEEDSS 63 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 + + K+ Y + LLS D N+A LE+H G+GGTE+QDWA+MLLRMY Sbjct: 64 VQEELEETLEKLDKIMTSY-EMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLLRMYQ 122 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RR Sbjct: 123 RYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRR 182 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV Sbjct: 183 HTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 242 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV PY M Sbjct: 243 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTM 302 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RT E V+DGD++ F+ A L Sbjct: 303 VKDHRTGYEVAQVDKVMDGDIEGFIDAYL 331 >gi|27467454|ref|NP_764091.1| peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC 12228] gi|251810188|ref|ZP_04824661.1| peptide chain release factor 2 [Staphylococcus epidermidis BCM-HMP0060] gi|293368216|ref|ZP_06614845.1| peptide chain release factor RF2 [Staphylococcus epidermidis M23864:W2(grey)] gi|27314997|gb|AAO04133.1|AE016745_232 peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC 12228] gi|251806240|gb|EES58897.1| peptide chain release factor 2 [Staphylococcus epidermidis BCM-HMP0060] gi|291317639|gb|EFE58056.1| peptide chain release factor RF2 [Staphylococcus epidermidis M23864:W2(grey)] Length = 332 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 158/322 (49%), Positives = 221/322 (68%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP W + +A+ ++ + L + ++ ++ + + D EL EE D + E + Sbjct: 3 DPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIELEEE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ FK Sbjct: 63 VQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQNGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S V Sbjct: 123 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 183 IPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242 Query: 271 KNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++E E+A I + +IGWG QIRSYV PY M+KD RTN Sbjct: 243 KNREAAMKMLKSKLYQLKLEEQEQEMAEI-RGEQKDIGWGSQIRSYVFHPYSMIKDHRTN 301 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DG++ F++A L Sbjct: 302 EETGKVDAVMDGEIGPFIEAYL 323 >gi|21909990|ref|NP_664258.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS315] gi|21904179|gb|AAM79061.1| putative peptide chain release factor 2 [Streptococcus pyogenes MGAS315] Length = 326 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 209/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L +Q+ + +LLE+ L+EDD + +E +N Sbjct: 3 EPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDEDDF-LKEELEEN 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + LLS D N+A LE+H G+GGTE+QDW ++LLRMYTR+ FK Sbjct: 61 LMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RTN E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DG+++ F+ A L Sbjct: 301 LAQVDKVMDGEINGFIDAYL 320 >gi|191637822|ref|YP_001986988.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23] gi|190712124|emb|CAQ66130.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23] Length = 332 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 147/320 (45%), Positives = 209/320 (65%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + A+ ++ L +++ L D EL +E D + QE Sbjct: 3 EPGFWDDSEAAQKVIDNNNALKEKHDRFYALENELEDLEAGFELLQDEPDKDLQQEEEAK 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW +ML+RMY RWA++ FK Sbjct: 63 IKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 123 VEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D+SIE+++ D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V Q +RSQ + Sbjct: 183 MPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQFQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NKA A ML+AKLY+ E + + A + + ++ +G QIRSYV PY MVKD RTN E Sbjct: 243 NKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + + V+DGDL+ F+ A L Sbjct: 303 TGNGNAVMDGDLNPFINAYL 322 >gi|332520510|ref|ZP_08396972.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4] gi|332043863|gb|EGI80058.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4] Length = 317 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 140/273 (51%), Positives = 202/273 (73%), Gaps = 8/273 (2%) Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 + L + ++ + + +E +F+++LS E DS A L++ AGAGGTES DWA ML+RMY Sbjct: 36 ATLNDVTNRFTKAQTAIEDLEFKNMLSEEGDSLSAVLQITAGAGGTESCDWAQMLMRMYL 95 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 +AEK FK + L + +G+ AGIK+ TL I+G A+GWLKGE GVHRLVRISP+DSN++R Sbjct: 96 MYAEKNNFKVKELNLQEGDVAGIKTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKR 155 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S++VYP+VDDSIEIEI+ +D I T R+SGAGGQ+VN ++ V++TH P+G+ + Sbjct: 156 HTSFASVYVYPLVDDSIEIEINPADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQIS 215 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQK----REEIANIGESSKTEIGWGRQIRSYVLQ 318 C + RSQH N+++A ML+++LYE+ELQK RE+I E++K +I WG QIR+YV+ Sbjct: 216 CSETRSQHDNRSRALQMLKSQLYEIELQKQLSQREDI----EAAKMKIEWGSQIRNYVMH 271 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY++VKD+RT E + V+DGD+ F+K+ L Sbjct: 272 PYKLVKDVRTGFESGNVDAVMDGDITPFLKSYL 304 >gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78] gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG] gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF] gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78] Length = 371 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 157/355 (44%), Positives = 219/355 (61%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D + ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D +E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T + P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--GE 300 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ +E N G+ Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 312 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGNS---WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|196231602|ref|ZP_03130460.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428] gi|196224455|gb|EDY18967.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428] Length = 350 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 214/322 (66%), Gaps = 4/322 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N A+ + E L N I + + ++ D +L+ELA E +D + ++E Sbjct: 3 EPDFWANKERAQKNVEEVSTLRNKIGPLLTLDRQIEDLPVLIELAREANDETSVKEVEKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 I+ + + + LL+G D +A+L +++GAGGTES DWA+MLLRMY RW E+ FK Sbjct: 63 YGVIQNGLAEFELKMLLNGPNDRYNAFLTINSGAGGTESCDWADMLLRMYQRWIERHGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 +E ++I GEEAGIKS TL + G A+G+L E+GVHRLVRISP+D+N RRHTSF+ + V Sbjct: 123 SEVMDIQLGEEAGIKSCTLKVAGEYAFGYLATERGVHRLVRISPFDANKRRHTSFAGVDV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + +S IEI+E+D +DTYR+ G GGQ+VN ++AVRI HIPTG+V CQ ERSQ K Sbjct: 183 VPELPESAPIEINEADIEVDTYRSGGKGGQNVNKVETAVRIRHIPTGIVAACQNERSQQK 242 Query: 272 NKAQAWNMLRAKLYELELQK--REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A ML+AKL ++E+ K E A GE K ++ +G QIRSYV QPYQ V DLRT Sbjct: 243 NKVTAMRMLQAKLQQIEVDKMAAETAAAYGE--KADVSFGSQIRSYVFQPYQKVLDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 ++ ++ S V+DGD+D F++ L Sbjct: 301 VDTSNISAVMDGDIDAFIQGKL 322 >gi|226305794|ref|YP_002765754.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4] gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121] gi|259585230|sp|C0ZXD0|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4] gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121] Length = 368 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 158/353 (44%), Positives = 223/353 (63%), Gaps = 10/353 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + D + +R+ L + DP LW + A+ + + H + I + Sbjct: 12 LDTTLRTCESVVDVEELRRRIDELEHQAADPGLWNDQEHAQQVTSQLSHAQAELRRIVAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++RL + IL ELA +E ++ ++ ++ ++ + +++LSGE D DA + + Sbjct: 72 RERLDEMPILYELAEDEGPDAVADADAERAS-LRDDIAAMEVKTMLSGEYDERDALINIR 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK + E + EEAG+KSAT IKGP YG L Sbjct: 131 SGAGGIDAADWAEMLMRMYIRWAEKHDYGVEVYDTSYAEEAGLKSATFAIKGPYTYGTLS 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ + IEI+E+D R+D YR+SG GGQ Sbjct: 191 VEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEINENDIRVDVYRSSGPGGQS 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI---- 298 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL L ++++EE A + Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKL--LAVKRQEERAEMDALK 308 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G+S + WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + Sbjct: 309 GDSGSS---WGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLEAGI 358 >gi|27904871|ref|NP_777997.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|27904269|gb|AAO27102.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 337 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 150/330 (45%), Positives = 220/330 (66%), Gaps = 1/330 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL +N + + P W++ K + +E+ L + ++ I +I + + + + +L L + Sbjct: 5 RLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKIDNDVQELIDILNLENSNNI 64 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 SIL + I+ + + S+ G+ D Y+++ +G+GG E+QDWA+MLLRMY Sbjct: 65 NSILDNVLYEFKNIEKSIHELEKCSMFLGKYDYLSCYVDIQSGSGGVEAQDWASMLLRMY 124 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RWAE +KFK + +E GE GIKSAT+ + G A+GW + E G+HRLVR SP++++ R Sbjct: 125 VRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFRTETGIHRLVRKSPFNAHHR 184 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSFSS++VYP++DD+I ++I+ D +ID YRASGAGGQHVN T+SAVRI H+PTG+VV Sbjct: 185 RHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQHVNKTESAVRIRHLPTGIVV 244 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ +RSQHKNK QA L+AKLYE + +++ I E++K IGWG QIRSY L + Sbjct: 245 QCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENNKLNIGWGHQIRSYTLDNSR 304 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +KDLRT +E + VLDG LD F++ +L Sbjct: 305 -IKDLRTGVESKNIQSVLDGGLDLFVECSL 333 >gi|329667680|gb|AEB93628.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii DPC 6026] Length = 332 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 209/320 (65%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N +A+ L+ + + K+++ + D LEL + D + +E S+ Sbjct: 3 EPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELSEE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A K Sbjct: 63 MVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHDLK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 123 FEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ + Sbjct: 183 IPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A NMLRAKL++LE +K+ + + ++ EIG+G QIRSYV PY MVKD RTN E Sbjct: 243 NRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + + V+DG LD+F+ A L Sbjct: 303 SSDVNGVMDGKLDNFIYAYL 322 >gi|291445100|ref|ZP_06584490.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 15998] gi|291348047|gb|EFE74951.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 15998] Length = 368 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 159/355 (44%), Positives = 222/355 (62%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E D E L+ +K ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMN-AL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364 >gi|194337758|ref|YP_002019552.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme BU-1] gi|194310235|gb|ACF44935.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme BU-1] Length = 363 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 153/347 (44%), Positives = 228/347 (65%), Gaps = 5/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIKEI-QDR 65 N GG+FD D +++ L + DP W + A +++E +H ++ K I + R Sbjct: 16 NSYGGIFDVDERKEKIEDLEKISFDPAFWNDQKAANKVLKELNEHKSWTDAYEKIILKAR 75 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 C + ++A+E DD S +E + + I+ ++ +F+++LSG+ D+ +A + +HAGA Sbjct: 76 SCQDE--FDIAIELDDESFGEELTALIASIEHDISAIEFKNMLSGKDDAGNAMITIHAGA 133 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK E Sbjct: 134 GGTEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIEGPYAYGYLKAEN 193 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR+SP+DSN+RRHTSF+S++ YP +EI++ + D + T+R+ G GGQ+VN Sbjct: 194 GVHRLVRVSPFDSNARRHTSFASVFTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNK 253 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 ++AVRI H+PTG+VV CQ+ERSQ +N+ +A ML A+LY+ + + + E K + Sbjct: 254 VETAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQRDEEDARKREIEGKKKK 313 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 I WG QIRSYVL + +KD RTN E+ VLDGDLD+FM+ L+ Sbjct: 314 IEWGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEKYLS 359 >gi|94987335|ref|YP_595268.1| protein chain release factor B [Lawsonia intracellularis PHE/MN1-00] gi|94731584|emb|CAJ54947.1| Protein chain release factor B [Lawsonia intracellularis PHE/MN1-00] Length = 362 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 159/356 (44%), Positives = 220/356 (61%), Gaps = 14/356 (3%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIKEIQDR 65 + GG+FD + RLS + P W N +++E+ L+ + + F K Sbjct: 1 MKFFGGVFDQPSYKNRLSEIEKILSAPDAWSNPEALTPILKEKSQLEADNLRFEKL---H 57 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFES---------LLSGEADSN 115 LC ++ L ++ + + +++ L+ + LE++ K+F+ LL E D Sbjct: 58 LCHTEMIDWFELVQEFLTTNESSTEFLEALTALELQVKKFQDAMEEAEMYLLLGAEEDKM 117 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 DA LE+H GAGGTE+QDWA ML RMY RWA+ F E ++ G+EAGIKS TL I G Sbjct: 118 DAILEIHPGAGGTEAQDWAEMLERMYLRWADLHGFSKEEMDYLPGDEAGIKSVTLRISGE 177 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NAYG LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P + + I+I +SD RID +R+ Sbjct: 178 NAYGLLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGEEVVIDIKDSDLRIDVFRS 237 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQ VNTT SAVRITHIPTG+V QCQ E+SQH NK A +LRA+LYE E++ R+ Sbjct: 238 SGPGGQSVNTTSSAVRITHIPTGIVAQCQNEKSQHHNKESAMRILRARLYEQEIKLRDAA 297 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K I +G QIR+Y +QPY++VKD RTN E + VL G +D F+ + L Sbjct: 298 KQAQYMGKEAISFGSQIRTYTMQPYRLVKDHRTNCESSDVEAVLGGQIDKFINSYL 353 >gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071] gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071] Length = 373 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 157/355 (44%), Positives = 219/355 (61%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D + ++ L + P LW + A+ + + HL + + + Sbjct: 15 LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D +E L ++ ++ + +LLSGE DS +A + + Sbjct: 75 RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T + P AYG L Sbjct: 135 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--GE 300 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ +E N G+ Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 314 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 315 GGNS---WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 366 >gi|38233352|ref|NP_939119.1| peptide chain release factor 2 [Corynebacterium diphtheriae NCTC 13129] gi|76363349|sp|Q6NIM2|RF2_CORDI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|38199612|emb|CAE49268.1| peptide chain release factor 2 [Corynebacterium diphtheriae] Length = 369 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 157/351 (44%), Positives = 221/351 (62%), Gaps = 4/351 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + ++ R+ L + DP LW + A+ + E + + + Sbjct: 11 QLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKLKKLST 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ ELA EE + + L + L + +VE + +++LSGE DS +A + + Sbjct: 71 LRQRIDDLPVMYELADEEGEDA-LALADEELAELTADVEALEVKTMLSGEYDSREAVINI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ I V PVV+ + I+I +S+ R+D YR+SG GGQ Sbjct: 190 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q +R E+ +G Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D ++A + Sbjct: 310 GGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLLEAGI 358 >gi|32423703|gb|AAP81246.1| peptide chain release factor [Candidatus Portiera aleyrodidarum] Length = 297 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 151/295 (51%), Positives = 209/295 (70%), Gaps = 4/295 (1%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 +K +++ + +N LL LA+ E D L ++ + E+ L SG+ D N+AY Sbjct: 1 MKTVENGIYNNAELLHLAITELDSKPLSFIKQDINFFEKELAKLDAVRLFSGDFDKNNAY 60 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AG+GG ESQDWANMLLRMY+RWA FKTE + ++ G+ G+KSATL IKG A+ Sbjct: 61 VEIKAGSGGVESQDWANMLLRMYSRWAVTHDFKTETVNLNIGDLLGVKSATLHIKGDYAF 120 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASG 237 GW++ E+G+HRLVR SP+DS+ RRHTSF+S++VYP + + I+I+ ++ RIDTYR+SG Sbjct: 121 GWMRTEKGIHRLVRKSPFDSSKRRHTSFTSVFVYPEITMKVHNIKINTNELRIDTYRSSG 180 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIA 296 AGGQHVNTTDSAVRITH+PT +VV+CQ ERSQH NK +A +L+ KLY+ + +K E E Sbjct: 181 AGGQHVNTTDSAVRITHLPTKIVVECQSERSQHSNKERALTLLKTKLYDFDKKKGEVERI 240 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 NI E K I WG QIRSYVL Q +KDLRT ++ + VL+G+LD F++A++ Sbjct: 241 NI-EKKKAGICWGNQIRSYVLDA-QRIKDLRTGVKNNNCEKVLNGELDLFIEASI 293 >gi|189502408|ref|YP_001958125.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus 5a2] gi|189497849|gb|ACE06396.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus 5a2] Length = 332 Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 216/323 (66%), Gaps = 2/323 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K+ P W+N +A++++R + + I ++ L +NL + +L E D E Sbjct: 8 KSLAPDFWENTSQAEVILRNLKITKSWIDAFDHVES-LLENLEVTQLFYEAGDVD-ETEV 65 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 Q + +E + +L E D N A +E++ GAGGTESQDWA ML RMY W EK Sbjct: 66 EKAYQNLLTGLEALEVRKMLQNEEDENSAIIEINPGAGGTESQDWAEMLTRMYIMWGEKH 125 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 + + L G+ AG+KSATL I G AYG+LK E G+HRLVRISP+D+ +RHTSF+S Sbjct: 126 NYTVKELAYQRGDVAGVKSATLEITGTFAYGYLKSEIGIHRLVRISPFDAAGKRHTSFAS 185 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 I+VYPVV+++I+I+I+ +D DT+RA GAGGQ+VN ++AVR+ H P+G++V+CQQERS Sbjct: 186 IYVYPVVENNIQIDINPADITWDTFRAGGAGGQNVNKVETAVRLKHAPSGIIVECQQERS 245 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +NK +A +L++KLY+LEL KR ESSK I +G QIR+YVL PY++VKD RT Sbjct: 246 QAQNKEKALRILKSKLYQLELDKRNAEKEKMESSKKRIDFGSQIRNYVLHPYKLVKDNRT 305 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 ++E + S VL+G++D+F+KA L Sbjct: 306 DVETSDTSGVLNGNIDEFIKAYL 328 >gi|254820379|ref|ZP_05225380.1| peptide chain release factor 2 [Mycobacterium intracellulare ATCC 13950] Length = 370 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 164/353 (46%), Positives = 224/353 (63%), Gaps = 7/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + E H + I+E+ Sbjct: 12 LDSTLTTVERVLDVDGLRARIEKLEREASDPQLWDDQTRAQRVTSELSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120 + RL D +L ELA EE + + + + ++ E+E + +LLSGE D +A + Sbjct: 72 RGRLDDLPVLYELAAEEGEGAAEALAEADAELKALQAEIEATEVRTLLSGEYDEREALVT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVELFDTSYAEEAGIKSATFAVHAPFAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GG Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + + Sbjct: 252 QSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRSEERAEL-D 308 Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 361 >gi|227889611|ref|ZP_04007416.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC 33200] gi|268319827|ref|YP_003293483.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785] gi|227849754|gb|EEJ59840.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC 33200] gi|262398202|emb|CAX67216.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785] Length = 332 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 209/320 (65%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N +A+ L+ + + K+++ + D LEL + D + +E S+ Sbjct: 3 EPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELSEE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A K Sbjct: 63 MVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHDLK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 123 FEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ + Sbjct: 183 IPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A NMLRAKL++LE +K+ + + ++ EIG+G QIRSYV PY MVKD RTN E Sbjct: 243 NRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + + V+DG LD+F+ A L Sbjct: 303 TSDVNGVMDGKLDNFIYAYL 322 >gi|257054828|ref|YP_003132660.1| peptide chain release factor 2 [Saccharomonospora viridis DSM 43017] gi|256584700|gb|ACU95833.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharomonospora viridis DSM 43017] Length = 368 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 155/323 (47%), Positives = 211/323 (65%), Gaps = 2/323 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P LW + A+ + + H ++ + E++ R+ D +L ELA E D + L E L Sbjct: 42 PDLWNDPEVAQRVTSQLSHKQASLRKVSELRQRVDDLGVLHELAEAEGDKASLAEAEAEL 101 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++ +V + +LLSGE D +A + + + AGG ++ DWA MLLRMY RWAE+ + T Sbjct: 102 AQLTKDVNALEVRTLLSGEYDERNAVVTIRSEAGGVDAADWAEMLLRMYLRWAERHNYPT 161 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E +I EEAGI+SAT I GP YG L EQG HRLVRISP+D+ +RR TSF+ + V Sbjct: 162 EIYDISYAEEAGIRSATFKISGPYLYGTLSVEQGTHRLVRISPFDNQNRRQTSFAHVEVL 221 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P V++ +EI E D R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N Sbjct: 222 PEVEEIDHVEIPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQN 281 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 KA A +L+AKL L+ +K EE A + + WG Q+RSYVL PYQ+VKDLRT+ E Sbjct: 282 KASAMKVLQAKL--LQRKKEEERAELDALRDSGSSWGNQMRSYVLHPYQLVKDLRTDYEV 339 Query: 333 TSPSDVLDGDLDDFMKATLAIKK 355 +PS VLDG+LD F++A + +K Sbjct: 340 GNPSAVLDGELDGFLEAGIRWRK 362 >gi|295698346|ref|YP_003603001.1| peptide chain release factor 2 [Candidatus Riesia pediculicola USDA] gi|291156977|gb|ADD79422.1| peptide chain release factor 2 [Candidatus Riesia pediculicola USDA] Length = 369 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 144/286 (50%), Positives = 204/286 (71%), Gaps = 2/286 (0%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 IL+E E+ D L+ET +L ++ +E + L S E D D Y+++ +G+GG +S Sbjct: 83 ILIECLKEKRDEDFLKETYRDLFNVRSMIENLKIFRLFSKENDFCDCYIDLQSGSGGIDS 142 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW +MLL+MY +W++ + F++ L GE GIKS+T++IKG AYGWL+ E G+HRL Sbjct: 143 QDWTSMLLKMYLKWSDLKNFRSYVLNTSYGEITGIKSSTIMIKGRYAYGWLRTETGIHRL 202 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VR SP+DS+ RRHTSFSS++VYPV++D EI I SD +ID+Y++SGAGGQH N T+SA Sbjct: 203 VRKSPFDSSGRRHTSFSSVFVYPVLEDPDQEIRIQSSDLKIDSYKSSGAGGQHTNKTESA 262 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITHIPTG+V QCQ RSQHKNK QA L+ KLYE++ ++++E + E++K +I WG Sbjct: 263 IRITHIPTGIVTQCQSNRSQHKNKEQALKQLKNKLYEIQKKEKQENQKVIENNKFDIAWG 322 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSY+L + VKDLRT IE+ + VL+G +D F+KA L ++K Sbjct: 323 NQIRSYIL-DHSRVKDLRTGIEERNVRSVLEGKIDKFIKANLILRK 367 >gi|251782076|ref|YP_002996378.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390705|dbj|BAH81164.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 331 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 209/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ + ++ L + +Q+ + + LE+ LEEDD S+ + + Sbjct: 7 EPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEM-LEEDD-SVKDDLEAS 64 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L+ + + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + FK Sbjct: 65 LETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFK 124 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF S+ V Sbjct: 125 VETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFVSVEV 184 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 185 MPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 244 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ N + K EI WG QIRSYV PY MVKD RTN E Sbjct: 245 NRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 304 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGD++ F+ A L Sbjct: 305 VAQVDKVMDGDIEGFIDAYL 324 >gi|331090528|ref|ZP_08339381.1| peptide chain release factor 2 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405871|gb|EGG85399.1| peptide chain release factor 2 [Lachnospiraceae bacterium 2_1_46FAA] Length = 337 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 155/326 (47%), Positives = 225/326 (69%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K E+P W++ ++ +MRE + L + + + + D +L+E+ E++D S++ Sbjct: 4 LQKKIEEPGFWEDTETSQKIMRELKGLQSFLENAESLLTSYEDIAMLIEMVYEDNDESMV 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E +++ + E + +LLSG D ++A + +HAGAGGTES DWA+ML RMY+RWA Sbjct: 64 GEIRREIRQFEKNFEEIRINTLLSGPYDKDNAIVTLHAGAGGTESCDWASMLYRMYSRWA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E++ F L+ DG+ GIK+ T + G NAYG+L+ E+GVHRLVRISP++S +R TS Sbjct: 124 ERKGFSISVLDYLDGDITGIKTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSAGKRQTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S V P ++D I+IEI+E D ++DTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ Sbjct: 184 FASCDVIPDIEDEIDIEINEDDLKVDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQN 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH N+ +A ML+AKLY ++ Q++ + + EIG+G QIRSYV+QPY +VKD Sbjct: 244 ERSQHSNREKAMQMLKAKLYLIKQQEQADKVSDIRGEVKEIGFGNQIRSYVMQPYTLVKD 303 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RTN+E + + VLDGD++ F+ A L Sbjct: 304 HRTNVENGNVTAVLDGDIEPFINAYL 329 >gi|237738152|ref|ZP_04568633.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817] gi|229420032|gb|EEO35079.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817] Length = 308 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 149/281 (53%), Positives = 201/281 (71%), Gaps = 1/281 (0%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+E +E+ + +E + + +VE+ LL GE DSN+A + +H+GAGGTE+ Sbjct: 23 VLIEF-VEQGETDFQEELEEKHIILGKDVEHFDTRLLLDGEYDSNNAIVTIHSGAGGTEA 81 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+ML RMY+RW +K+K ++ G+ GIKS T +++G NA+G+LK E+GVHRL Sbjct: 82 CDWADMLYRMYSRWCSDKKYKISEMDFMPGDSVGIKSITFMVEGMNAFGYLKSEKGVHRL 141 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N +RHTSF+S+ V P VDDSIE+ I SD RIDTYRASGAGGQHVN TDSAV Sbjct: 142 VRISPFDANKKRHTSFASVEVVPEVDDSIEVNIDPSDIRIDTYRASGAGGQHVNMTDSAV 201 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VV CQ+ERSQ N+ A +L++KL ELE++K+EE + +++IGWG Sbjct: 202 RITHFPTGIVVTCQRERSQLSNRETAMKLLKSKLIELEMKKKEEELKKLQGEQSDIGWGN 261 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV QPY +VKD RTN E + V+DGD+D F+ L Sbjct: 262 QIRSYVFQPYTLVKDHRTNCESGNIKAVMDGDIDIFINGYL 302 >gi|118467007|ref|YP_883159.1| peptide chain release factor 2 [Mycobacterium avium 104] gi|166225107|sp|A0QJS1|RF2_MYCA1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|118168294|gb|ABK69191.1| peptide chain release factor 2 [Mycobacterium avium 104] Length = 370 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 164/353 (46%), Positives = 224/353 (63%), Gaps = 7/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + E H + I+E+ Sbjct: 12 LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120 + RL D +L ELA EE + + + + ++ ++E + +LLSGE D +A + Sbjct: 72 RARLDDLPVLYELAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GG Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + + Sbjct: 252 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRSEERAEL-D 308 Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 361 >gi|254776429|ref|ZP_05217945.1| peptide chain release factor 2 [Mycobacterium avium subsp. avium ATCC 25291] Length = 370 Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 164/353 (46%), Positives = 224/353 (63%), Gaps = 7/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + E H + I+E+ Sbjct: 12 LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120 + RL D +L ELA EE + + + + ++ ++E + +LLSGE D +A + Sbjct: 72 RARLDDLPVLYELAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GG Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + + Sbjct: 252 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRSEERAEL-D 308 Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 361 >gi|257125766|ref|YP_003163880.1| peptide chain release factor 2 [Leptotrichia buccalis C-1013-b] gi|257049705|gb|ACV38889.1| bacterial peptide chain release factor 2 (bRF- 2) [Leptotrichia buccalis C-1013-b] Length = 364 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 167/351 (47%), Positives = 225/351 (64%), Gaps = 20/351 (5%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLW---------QNVIEAKMLMRERQHLDNAISFIKEIQD 64 D +N + L +T +P W +N+ K ++ E +L+ + I Sbjct: 24 LDLENLKIEIENLEKQTFEPDFWNAENSQEILKNISAKKKMLEEYDNLNGLFEDVSTI-- 81 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 +E +E D S E ++++ E++ + + LL E D+N+A L +++G Sbjct: 82 --------IEF-IEMGDNSFENELEQKAKKLENEIDNFKTKLLLDEEYDTNNAILTINSG 132 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+ DWA ML RMY RWA + FK E L+ GEEAGIKS TL IKG AYG+LKGE Sbjct: 133 AGGTEACDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIKGSYAYGYLKGE 192 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +GVHRLVRISP+DSN+RRHTSF+++ V P ++D +EI I D +IDTYRASGAGGQHVN Sbjct: 193 KGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVEINIRTEDLKIDTYRASGAGGQHVN 252 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITHIPT VV CQ ERSQ KN+ A +L++KL+ELEL+KRE+ + +++ Sbjct: 253 TTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGTES 312 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +I WG QIRSYV QPY+MVKD RT E+ + V+DGD+D F+ L K Sbjct: 313 KIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYSK 363 >gi|164687096|ref|ZP_02211124.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM 16795] gi|164603981|gb|EDQ97446.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM 16795] Length = 349 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 143/274 (52%), Positives = 202/274 (73%), Gaps = 2/274 (0%) Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 SI + ++++++ +++ + ++LL+G+ D N+A L ++AG GG ++QD A M+LRMY Sbjct: 73 SIEHDIEKSIKKLEDKIDEVKIKTLLNGKYDVNNAVLSINAGTGGLDAQDCAQMILRMYL 132 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWA++ FK + L++ EAGIKS TLLI+G NAYG+LK E+GVHR+VRISP+D++ +R Sbjct: 133 RWADQNNFKVKTLDMISDPEAGIKSVTLLIQGTNAYGYLKSEKGVHRIVRISPFDASGKR 192 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF S+ V P +DD I++EI+ +D +IDTYR+SGAGGQHVN TDSAVRITHIPTG+VVQ Sbjct: 193 HTSFVSVDVTPELDDKIDVEINPNDLKIDTYRSSGAGGQHVNKTDSAVRITHIPTGIVVQ 252 Query: 263 CQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ NK A ML+ KL L EL+ +E I +I + ++I WG QIRSYV QPY+ Sbjct: 253 CQNERSQFANKDTAMKMLKGKLIHLKELENKERIEDI-QGKYSQITWGSQIRSYVFQPYK 311 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +VKD RTN E + V+DG+++ F+ L + K Sbjct: 312 LVKDHRTNAEIGNVDSVMDGNINLFINEYLKMNK 345 >gi|302544934|ref|ZP_07297276.1| peptide chain release factor 2 [Streptomyces hygroscopicus ATCC 53653] gi|302462552|gb|EFL25645.1| peptide chain release factor 2 [Streptomyces himastatinicus ATCC 53653] Length = 370 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 162/355 (45%), Positives = 225/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + +L + +E+ Sbjct: 13 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D E L ++ V+ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAADEGDEDARAEAEAELNAVRKAVDEMEVRTLLSGEYDAREAVVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEIYETSYAEEAGIKSTTFAVQIPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ RID YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRIDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +N+A A N+L+AKL L+ +++EE A + ++ Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNRATAMNVLQAKL--LDRRRQEEQAKM-DAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P VLDG+LD F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 364 >gi|120436153|ref|YP_861839.1| peptide chain release factor 2 [Gramella forsetii KT0803] gi|117578303|emb|CAL66772.1| peptide chain release factor 2 [Gramella forsetii KT0803] Length = 333 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 152/330 (46%), Positives = 231/330 (70%), Gaps = 6/330 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ--DRLCDNLILLELALEEDDCS 83 + KT P W + +A+ +M+E ++ S++ + + + L ++L ++ +ED+ + Sbjct: 1 MEEKTFAPDFWDDPKKAEQIMKE---VNAEKSWVGDYEKAETLVEDLEVIYDFYKEDEAT 57 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 N + ++L +E +F+++LS E DS A L++ AGAGGTES DWA ML+RMY Sbjct: 58 AEDVQQRNDKAVEL-IEDLEFKNMLSEEGDSMSAVLQITAGAGGTESCDWAEMLMRMYLM 116 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAEKRK+K L G+ AGIK+ TL I+G A+GWLKGE GVHRLVRISP+DSN++RH Sbjct: 117 WAEKRKYKIRELNYQAGDVAGIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRH 176 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S ++YP+VDDSIEI+I+ SD +T R+SGAGGQ+VN ++AVR+ H PTG+V++ Sbjct: 177 TSFASAYIYPLVDDSIEIDINPSDLSWETMRSSGAGGQNVNKVETAVRLRHEPTGIVIEN 236 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 + RSQ +NK +A +L+++L+E+ELQK++E E SK +I WG QIR+YV+ PY++V Sbjct: 237 SETRSQLENKNKAMQLLKSQLFEIELQKKQEQRREIEDSKMKIEWGSQIRNYVMHPYKLV 296 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KD+RT E + DV++G++D F+K+ L + Sbjct: 297 KDVRTAEETGNVDDVMNGNIDAFLKSFLMM 326 >gi|296122601|ref|YP_003630379.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776] gi|296014941|gb|ADG68180.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776] Length = 372 Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 155/342 (45%), Positives = 224/342 (65%), Gaps = 4/342 (1%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+D R++ +N P W + +A+ L+ E ++++ ++ ++E+ D + +L Sbjct: 23 LDYDQWQARVAEINEAMSAPDFWDHQEKAQALVTELRNVNGSLKPLQELIDGTEELAVLR 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E E+D E L ++ + + + ++++S D AYL++ AG GGT++ DW Sbjct: 83 EFLAEDDSSESRDEMVGLLASLQEKFQQVELKAMMSRPEDPCSAYLQIQAGEGGTDASDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTRWAE R F+TE +EI + EEAGI++ATL I+G YG L+GE GVHRL+RI Sbjct: 143 AAMLLRMYTRWAEDRGFETELIEISEAEEAGIRNATLAIRGEYVYGLLRGETGVHRLIRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI---DTYRASGAGGQHVNTTDSAV 250 SP+D RR TSF+++ V P DD+I+I+I+ D +I D +RASGAGGQHVN T SA+ Sbjct: 203 SPFDGAGRRQTSFAAVDVIPEPDDTIDIDINWEDPKIIREDIFRASGAGGQHVNKTSSAI 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PT VVQCQ ERSQHKN++ ML AKL +LE KRE A K++IG+G Sbjct: 263 RLTHLPTNTVVQCQNERSQHKNRSWCRKMLVAKLLQLETVKRENEAAHKRGQKSKIGFGG 322 Query: 311 Q-IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + IR+YVL P Q VKD RTN++ +P VLDG +D+F++A L Sbjct: 323 ETIRNYVLNPEQFVKDTRTNLKVGTPMPVLDGRIDEFLEAYL 364 >gi|150015324|ref|YP_001307578.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB 8052] gi|149901789|gb|ABR32622.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB 8052] Length = 324 Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 153/318 (48%), Positives = 216/318 (67%), Gaps = 3/318 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W N+ +A+ + ++ + + + I +++ ++ D +L E+ +E+DD E L+ Sbjct: 6 FWDNIKKAEEVTKKSKSIKDKIESFDKLKSQIEDIEVLKEI-MEDDDEESANEIIQTLRD 64 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 I+ +++ + LL GE D N+A L +H G GGT++ DW MLLRMYTRW EK+ + E Sbjct: 65 IQAQIDDYNMKVLLCGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKQGYSIET 124 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L++ G+EAGIKS TL + G AYG+LK E+G+HRLVRISPY++N +R TSF+S+ V P Sbjct: 125 LDLLPGDEAGIKSVTLKVTGEYAYGYLKAEKGIHRLVRISPYNANGKRQTSFASMEVLPE 184 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +IEI D +IDTYR+ GAGGQHVN TDSAVRITHIPTGVVVQCQ ERSQ N+ Sbjct: 185 LTKEQDIEIRSDDLKIDTYRSGGAGGQHVNKTDSAVRITHIPTGVVVQCQNERSQFSNRD 244 Query: 275 QAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML++KL EL E +E+I ++ K ++GWG QIRSYV PY MVKD RTN+E + Sbjct: 245 TAMEMLKSKLVELKERAHKEKIEDLTGELK-DMGWGSQIRSYVFHPYSMVKDHRTNVETS 303 Query: 334 SPSDVLDGDLDDFMKATL 351 + + V+DG++D F+ A L Sbjct: 304 NVTSVMDGEIDMFINAYL 321 >gi|153854560|ref|ZP_01995830.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814] gi|149752869|gb|EDM62800.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814] Length = 312 Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 154/306 (50%), Positives = 215/306 (70%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E ++L + I + D +L+E+ E++D ++++E + + + E + + Sbjct: 1 MKELKNLKELVETIHGLYTSYEDINLLIEMGYEDEDPAMVKELEEEIHTFEKVFEKLKIQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE D+ +A + +HAGAGGTES DWA ML RMY RWAE++ F + L+ DG+ AGI Sbjct: 61 TLLSGEYDACNAIMTIHAGAGGTESCDWAGMLYRMYCRWAERKGFSLQVLDFLDGDIAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T +KG NAYG+LK E+GVHRLVRISP++S +R TSF+S V P ++D I+IEI E Sbjct: 121 KAVTFEVKGENAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVLPDLEDDIDIEIDE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A ML+AKL Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKAKLQ 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++ Q++ E + +IG+G QIRSYV+QPY +VKD RTN E ++ + V+DGD+D Sbjct: 241 LMKEQEQAEKVSDIRGEVKDIGFGNQIRSYVMQPYTLVKDHRTNEENSNVNAVMDGDIDS 300 Query: 346 FMKATL 351 F+ A L Sbjct: 301 FINAYL 306 >gi|331695045|ref|YP_004331284.1| peptide chain release factor 2 [Pseudonocardia dioxanivorans CB1190] gi|326949734|gb|AEA23431.1| Peptide chain release factor 2 [Pseudonocardia dioxanivorans CB1190] Length = 369 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 159/356 (44%), Positives = 221/356 (62%), Gaps = 9/356 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTED-------PHLWQNVIEAKMLMRERQHLDNA 55 ++ L L G + AV L L + D P LW + A+ + H + Sbjct: 5 VAADLKDLAGTLENIEAVVDLPALRVEIADLEEQAGQPDLWNDTETAQKVTSRLAHANGE 64 Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + +++++ RL D +L ELA +E D S + + + ++ E+E + +LLSGE D Sbjct: 65 LRRVEDLRRRLDDLPVLYELAEDEGDESAIADADRDRVALRAEIESLEVRTLLSGEYDER 124 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A + + + AGG ++ D+A ML+RMY RWAE+ + + + EEAGIKSAT + P Sbjct: 125 EALVTIRSEAGGVDAADFAEMLMRMYLRWAERHGYGVDVYDTSYAEEAGIKSATFQVHAP 184 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E D R+D YR+ Sbjct: 185 YAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESTDHIDIDEKDLRVDVYRS 244 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A +L+AKL LE +++EE Sbjct: 245 SGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMVVLQAKL--LERKRQEER 302 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 A + T WG Q+RSYVL PYQMVKDLRT+ E +P VLDGD+D F++A + Sbjct: 303 ALMDSLKDTGSSWGNQMRSYVLHPYQMVKDLRTDFEVGNPGAVLDGDIDGFIEAGI 358 >gi|153005568|ref|YP_001379893.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5] gi|152029141|gb|ABS26909.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5] Length = 309 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 145/270 (53%), Positives = 193/270 (71%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L ELA E D + QE + + + ++E +F+ +LSGE D A +EV Sbjct: 8 VRRSLDDAEALAELADEARDEATRQEAAQQCEVVAKDLEALEFQKMLSGEHDRAGAIVEV 67 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG E+ DWA ML RMYTR+ E+R + E ++ GEEAGI A+ + +G AYG+L Sbjct: 68 KSGAGGVEAMDWAAMLYRMYTRYCERRGWSVEPADLVAGEEAGISQASFIARGEFAYGFL 127 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D +RR TSF+++ V P ++D I ++I E+D RIDTYR+SGAGGQ Sbjct: 128 KAERGVHRLVRISPFDQAARRQTSFAAVDVTPEIEDDIVVDIKEADVRIDTYRSSGAGGQ 187 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VN TDSAVR+TH+PTG+VV Q ERSQ KN+ AW +LRAKLYELE +KR E + E+ Sbjct: 188 KVNKTDSAVRLTHLPTGIVVAVQNERSQQKNRGVAWKILRAKLYELEEKKRAEARDAVEA 247 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 +K +I +G QIRSYVLQPY+MVKDLRT +E Sbjct: 248 TKKDIDFGSQIRSYVLQPYRMVKDLRTGVE 277 >gi|237740862|ref|ZP_04571343.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13] gi|229431159|gb|EEO41371.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13] Length = 331 Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 151/322 (46%), Positives = 220/322 (68%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 T + + W + ++ +++ N +S +++ + D +L++ +E + S E Sbjct: 5 TFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDF-VESGEASFENELQ 63 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + LL GE D N+A + +H+GAGGTE+ DWA+ML RMY RW + Sbjct: 64 TKHKILKSDIEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKG 123 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K L+ +G+ G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ Sbjct: 124 YKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASV 183 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VD+++E+EI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ Sbjct: 184 EVVPEVDENVEVEINPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQ 243 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL ELE++K+EE + +++IGWG QIRSYV QPY +VKD RTN Sbjct: 244 LSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTN 303 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + V+DG +DDF+ + L Sbjct: 304 TEIGNVKAVMDGSIDDFINSYL 325 >gi|302190497|ref|ZP_07266751.1| peptide chain release factor 2 [Lactobacillus iners AB-1] Length = 332 Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 149/315 (47%), Positives = 205/315 (65%), Gaps = 6/315 (1%) Query: 37 QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96 Q +IEA MRE+ + + + L D +EL E + +L E + ++++K Sbjct: 14 QKIIEATNYMREK------VDKYQTLSSALADAKTAVELYNMEPENDMLMEITAEVEKLK 67 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 E + LLSG+ D ++A LE+H+GAGGTE+ DWANML RMY RW + E + Sbjct: 68 NEFNNYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDD 127 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 G+EAG+KS ++ ++G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ V P +D Sbjct: 128 FQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEID 187 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 SI IEI+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ +N+ A Sbjct: 188 KSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQFQNRETA 247 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +MLRAKL++LE K+ + + ++ EI +G QIRSYV PY MVKD RT+ E + Sbjct: 248 MDMLRAKLFKLEEDKKRKQTEALKGNQKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTI 307 Query: 337 DVLDGDLDDFMKATL 351 V++G+LD F+ A L Sbjct: 308 GVMNGNLDPFIYAYL 322 >gi|322389911|ref|ZP_08063451.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 903] gi|321143347|gb|EFX38785.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 903] Length = 336 Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 152/331 (45%), Positives = 209/331 (63%), Gaps = 2/331 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + ++ L K +P W + I A+ +E L ++ D ++ ILL+ L ED Sbjct: 3 EEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDF-LAED 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + K Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRM Sbjct: 62 DSVKEELIEKLEELDKRMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRM 120 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+ FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS Sbjct: 121 YTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAK 180 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Sbjct: 181 RRHTSFTSVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV 240 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V +R+Q+ N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY Sbjct: 241 VASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPY 300 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKD RTN E V+DGD+D F+ A L Sbjct: 301 TMVKDHRTNYEVAQVDKVMDGDIDGFIDAYL 331 >gi|237743972|ref|ZP_04574453.1| peptide chain release factor 2 [Fusobacterium sp. 7_1] gi|256027415|ref|ZP_05441249.1| peptide chain release factor 2 [Fusobacterium sp. D11] gi|289765378|ref|ZP_06524756.1| peptide chain release factor 2 [Fusobacterium sp. D11] gi|229433003|gb|EEO43215.1| peptide chain release factor 2 [Fusobacterium sp. 7_1] gi|289716933|gb|EFD80945.1| peptide chain release factor 2 [Fusobacterium sp. D11] Length = 308 Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 151/298 (50%), Positives = 211/298 (70%), Gaps = 1/298 (0%) Query: 54 NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 N +S +++ + D +L++ +E + S E S+ + +K +VE + LL GE D Sbjct: 6 NIVSRYEKLATEIEDEEVLIDF-VESGETSFESELSEKHKILKNDVEEFEINLLLDGEYD 64 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ G+KS T L++ Sbjct: 65 MNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVTELDFMEGDSVGVKSVTFLVE 124 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI +D RIDTY Sbjct: 125 GINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEIDPADIRIDTY 184 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ N+ A ML++KL ELE++K+E Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKKE 244 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E + +++IGWG QIRSYV QPY +VKD RTN E + V+DG +DDF+ + L Sbjct: 245 EEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYL 302 >gi|163754877|ref|ZP_02161998.1| peptide chain release factor RF-2 [Kordia algicida OT-1] gi|161324944|gb|EDP96272.1| peptide chain release factor RF-2 [Kordia algicida OT-1] Length = 316 Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 143/291 (49%), Positives = 210/291 (72%), Gaps = 2/291 (0%) Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+ D + D +L E E D +E + ++ K ++E +F ++LS E DS A L+ Sbjct: 16 EVADLIGDLEVLYEFYKEGDASE--EEVTAQFEKTKTKIEDLEFRNMLSDEGDSMSAVLQ 73 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 V AGAGGTES DWA+ML+RMY +AEK+ +K + L +G+ AGIK+ TL I+G A+GW Sbjct: 74 VTAGAGGTESCDWASMLMRMYLMFAEKQGYKVKELNYQEGDVAGIKTVTLEIEGDYAFGW 133 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ +D I T R+SGAGG Sbjct: 134 LKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPADIEITTARSSGAGG 193 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN ++ V++TH P+G+ + C + RSQH N+ +A ML+++LYE+EL+K+ E + E Sbjct: 194 QNVNKVETKVQLTHKPSGIQISCSETRSQHDNRTRAMQMLKSQLYEIELKKQMEARDDIE 253 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K +I WG QIR+YV+ PY++VKD+RT E + V++G +D+F+KA L Sbjct: 254 AGKMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGYIDEFLKAYL 304 >gi|261417352|ref|YP_003251035.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373808|gb|ACX76553.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 368 Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 152/355 (42%), Positives = 233/355 (65%), Gaps = 9/355 (2%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L +++ L G D + + L L + DP+LW + +A+ +M++ +L I K Sbjct: 11 IELRSRIDKLWGYLDLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWK 70 Query: 61 EIQDRLCDNLI-LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 E+ + CD+L L E++ +E+ + ++ +K VE +F+ +L+G D+ + Sbjct: 71 EVS-QTCDDLAELYEMSKDEESADLTATLESDIADLKSRVEAMEFKKMLNGPDDACACLM 129 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 +H GAGGTESQDWA ML RMYT + E+ K + ++ + E+AG+KSAT+ + NAYG Sbjct: 130 SIHPGAGGTESQDWALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYG 189 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L+ E GVHRLVRISP+D+N+RRHTSF+++++YP +D +E ++ S+ R+DTYR+SGAG Sbjct: 190 LLRSEIGVHRLVRISPFDANARRHTSFTAVYLYPEHED-VEFDLDMSEVRVDTYRSSGAG 248 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR---AKLYELELQKREEIA 296 GQ++N TDSAVR+TH+PTG++ CQ ERSQ +N+ + ML+ A+ Y LE + + + A Sbjct: 249 GQYINKTDSAVRMTHLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRD-A 307 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E K E WG QIRSYVLQPYQ+VKDLRT +E + + VLDG + F+ A L Sbjct: 308 RMAEKKKVE--WGSQIRSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 360 >gi|300174043|ref|YP_003773209.1| peptide chain release factor 2 [Leuconostoc gasicomitatum LMG 18811] gi|299888422|emb|CBL92390.1| Peptide chain release factor 2 [Leuconostoc gasicomitatum LMG 18811] Length = 372 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 153/329 (46%), Positives = 213/329 (64%), Gaps = 4/329 (1%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED--DC 82 F N TE W + ++A+ ++ E L N + + + +L+E+ L ED D Sbjct: 36 FENRMTE-SGFWDDNVKAQKIIEENNVLKNRRDSFLNLTSQAEEIDLLIEM-LSEDVTDS 93 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 ++ E +++ + + ++E E LL+ D+N+A LEVH G+GGTES DW L RMYT Sbjct: 94 EMMSELEESIVKAQKDIETYNLEQLLTEPYDANNAILEVHPGSGGTESTDWGANLYRMYT 153 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWA++ F+ + L+ H G+EAGI SAT+ I G NA+G+L+ E+GVHR VRISP+DS RR Sbjct: 154 RWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLRSEKGVHRFVRISPFDSAGRR 213 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF S+ V P +DD+I+IEI + D ++D +R+ GAGGQ+VN + VR+TH PTG+VV Sbjct: 214 HTSFVSVDVMPELDDTIDIEIRDDDVKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVS 273 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 ER+Q+ N+ A +L+ KLY+LEL+K+E K E GWG QIRSYVL PYQM Sbjct: 274 STVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTGDKLENGWGSQIRSYVLHPYQM 333 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RT+ E P VLDGDLD F+ A L Sbjct: 334 VKDHRTDYETNQPQQVLDGDLDPFINAYL 362 >gi|116629958|ref|YP_815130.1| protein chain release factor B [Lactobacillus gasseri ATCC 33323] gi|238854078|ref|ZP_04644428.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4] gi|282851440|ref|ZP_06260805.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1] gi|311110410|ref|ZP_07711807.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22] gi|116095540|gb|ABJ60692.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus gasseri ATCC 33323] gi|238833312|gb|EEQ25599.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4] gi|282557408|gb|EFB63005.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1] gi|311065564|gb|EFQ45904.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22] Length = 332 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 209/320 (65%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + +A+ L+ E + K ++++ D LEL + D + +E S Sbjct: 3 EPGFWDDQEQAQSLINETNRMKEKSENFKRLEEKFEDAQTALELLKADPDPELSEELSKE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A K Sbjct: 63 MFSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHNLK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 123 FEIEDYEPGEEAGVKSVSVRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ + Sbjct: 183 IPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A NMLRAKL++LE +K+++ + ++ EIG+G QIRSYV PY MVKD RTN E Sbjct: 243 NRETAMNMLRAKLFQLEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + + V+DG LDDF+ A L Sbjct: 303 TSDVNGVMDGKLDDFIYAYL 322 >gi|268316864|ref|YP_003290583.1| LigA [Rhodothermus marinus DSM 4252] gi|262334398|gb|ACY48195.1| LigA [Rhodothermus marinus DSM 4252] Length = 371 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 154/356 (43%), Positives = 227/356 (63%), Gaps = 7/356 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ LG D ++++ LN + P W N A+ + ++ ++ ++ +++ Sbjct: 8 LLERVDTLGRFLDIPGRKEKIAKLNEERLAPGFWDNPERAREVEKQIAEEESWVAAWEQL 67 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D LLEL EE D ++ +E + + R++ +++ + SLL+ D +A L +H Sbjct: 68 RRQADDVQTLLELQQEEPDANLEEEIAREVARLEQQLDELELRSLLTDPDDHRNAILTIH 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA MLLRMYTRW E+ + E LE G+ AGIKSATL I GP AYG+LK Sbjct: 128 PGAGGTESQDWAEMLLRMYTRWGERHGYDVELLEYQAGDVAGIKSATLRIAGPYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+D++ RRHTSF+S++VYP +DDSIE++I + + T+R+ G GGQ+ Sbjct: 188 GESGVHRLVRISPFDASGRRHTSFASVFVYPEIDDSIEVDIRPDEIEMQTFRSGGKGGQN 247 Query: 243 VNTTDSAVRIT---HIPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 VN ++ VR+ + G VV +C +ERSQ +N+ +A ML++++Y+LE + RE Sbjct: 248 VNKVETGVRLIWHGKLSNGEEARVVAECTEERSQLQNRQRALTMLKSRIYQLEREIREAE 307 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ES K +I WG QIRSYV QPY MV D RT + T V+DGDLD F++A L Sbjct: 308 KRKRESQKKKIEWGSQIRSYVFQPYTMVNDHRTETKVTDVQAVMDGDLDPFIRAYL 363 >gi|225624841|gb|ACN96555.1| PrfB [Francisella noatunensis subsp. orientalis] Length = 294 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 153/287 (53%), Positives = 203/287 (70%), Gaps = 2/287 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L R++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETLTELLELAEED--ESLIQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D N+ +L + +G+GGTE+QDWA ML+RMY RWA+ + F Sbjct: 62 DTQDVTAEIEKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMRWADSQGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL I+G AYGW + E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWGSQIRSYVL 288 >gi|47558936|gb|AAT35568.1| protein release factor 2 [Chlamydia trachomatis] Length = 368 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 157/323 (48%), Positives = 209/323 (64%), Gaps = 9/323 (2%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W +V A + L +S E+++++ ++ LE+++ S E L++ Sbjct: 44 FWDDVARAGKISERIARLKQQLSEFNELKNKVS----TIQFFLEDEESSKDLEMQKELEK 99 Query: 95 IKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + E K E LLSGE D + +L ++AGAGGTES DW M+LRMY RWA + Sbjct: 100 EFVFCERKITEWETLRLLSGELDRSSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 159 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF+S+ Sbjct: 160 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 219 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV Q ERSQ Sbjct: 220 VFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSRQNERSQI 279 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+RT Sbjct: 280 QNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTGY 339 Query: 331 EKTSPSDVLDGD-LDDFMKATLA 352 E + ++DG+ LD F+KA L Sbjct: 340 EVGNIQAMMDGELLDAFIKAYLV 362 >gi|195973776|gb|ACG63453.1| peptide chain release factor 2 [Francisella noatunensis] Length = 294 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 152/287 (52%), Positives = 203/287 (70%), Gaps = 2/287 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ R++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNFGRQKVELENIVHNCEHISETLETLTELLELAEED--ESLMQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ F Sbjct: 62 DTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK L I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCALKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQH+N TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVL 288 >gi|42518772|ref|NP_964702.1| peptide chain release factor 2 [Lactobacillus johnsonii NCC 533] gi|41583058|gb|AAS08668.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii NCC 533] Length = 332 Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 149/320 (46%), Positives = 209/320 (65%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W N +A+ L+ + + K+++ + D LEL + D + +E S+ Sbjct: 3 EPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELSEE 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A K Sbjct: 63 MVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAVSHDLK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 123 FEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG++ Q +RSQ + Sbjct: 183 IPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIITSSQAQRSQLQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A NMLRAKL++LE +K+ + + ++ EIG+G QIRSYV PY MVKD RTN E Sbjct: 243 NRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + + V+DG LD+F+ A L Sbjct: 303 TSDVNGVMDGKLDNFIYAYL 322 >gi|253581892|ref|ZP_04859116.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725] gi|251836241|gb|EES64778.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725] Length = 328 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 149/322 (46%), Positives = 216/322 (67%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 T + W + + +++E I+ K+++ + + +L++ +E + E Sbjct: 2 TMEESFWNDKRSSSAVIKEMNEEKEIIAEFKKLESEVGEEEVLIDF-VEMGETDFQAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++++ LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW ++K Sbjct: 61 EKHMILGKDIDHFDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEKK 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K ++ G+ GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S+ Sbjct: 121 YKISEMDFMPGDSVGIKSITFLVEGSNAYGYMKSEKGIHRLVRISPFDANKKRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VD+S+E+ + D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERSQ Sbjct: 181 EVMPEVDESVEVNVDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL ELE++K+EE + ++EIGWG QIRSYV QPY +VKD RT Sbjct: 241 LNNRETAMKMLKSKLIELEMKKKEEELKKIQGEQSEIGWGNQIRSYVFQPYTLVKDHRTA 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + V+DGD+D F+ L Sbjct: 301 AESGNIKAVMDGDIDIFINTYL 322 >gi|322385191|ref|ZP_08058838.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC 51100] gi|321270815|gb|EFX53728.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC 51100] Length = 325 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L ++ + ++ ILL+ L EDD + Sbjct: 3 EPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF-LAEDDSVQEELEEKL 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K+ Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 62 TELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74] gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74] Length = 371 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 156/355 (43%), Positives = 218/355 (61%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D + ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLGKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D +E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T + P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHTPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--GE 300 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ +E N G+ Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQEKMNALKGD 312 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGNS---WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|319954923|ref|YP_004166190.1| bacterial peptide chain release factor 2 (brf-2) [Cellulophaga algicola DSM 14237] gi|319423583|gb|ADV50692.1| bacterial peptide chain release factor 2 (bRF-2) [Cellulophaga algicola DSM 14237] Length = 366 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 157/351 (44%), Positives = 227/351 (64%), Gaps = 7/351 (1%) Query: 7 LNCLGGL---FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L+ LG L D D + + KT P W N +A+ M+ Q + K + Sbjct: 12 LDRLGALRRYLDVDAKLIEIENEQEKTLAPDFWDNPQKAQEHMKYIQSKKKWVDDYKTSE 71 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVH 122 D +L+E + + +I +E + L+ +E +F+++LS E D A +++ Sbjct: 72 TLANDLEVLIEF---QKEGAITEEEVEKQYTKTLDTIENLEFKNMLSEEGDELPAIIQIT 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML+RMY W+EK+ FK + L +G+ GIK+ TL I G ++GWLK Sbjct: 129 AGAGGTESCDWAAMLMRMYMMWSEKKGFKIKELNYQEGDVTGIKTVTLEIDGEFSFGWLK 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI I+ +D I T R+SGAGGQ+ Sbjct: 189 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIAINPADIDITTARSSGAGGQN 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH P+G+ + C RSQH+N+A A ML+++LYE+EL+K+ E ESS Sbjct: 249 VNKVETKVQLTHKPSGIQISCSDSRSQHENRATALKMLKSQLYEIELRKKMEARQEIESS 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIR+YV+ PY++VKD+RT E + V+DGD+D F+KA L + Sbjct: 309 KMKIEWGSQIRNYVMHPYKLVKDVRTATETGNVDAVMDGDIDKFLKAFLMM 359 >gi|195973772|gb|ACG63451.1| peptide chain release factor 2 [Francisella noatunensis subsp. orientalis] Length = 294 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 153/287 (53%), Positives = 203/287 (70%), Gaps = 2/287 (0%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L R++ L+N + + I + L LLELA E+ S++QE + Sbjct: 4 EDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETLTELLELAEED--ESLIQEIAK 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + Q + E+E +F + SG+ D N+ +L + +G+GGTE+QDWA ML+RMY RWA+ + F Sbjct: 62 DTQDVTAEIEKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMRWADSQGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K ++ DG+ AGIK TL I+G AYGW + E G+HRLVR SP+DSNS+RHTSF+S++ Sbjct: 122 KVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRHTSFASVF 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQH Sbjct: 182 ISPEVDDDIDIEINPADXRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 KN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL Sbjct: 242 KNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWGSQIRSYVL 288 >gi|225568858|ref|ZP_03777883.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM 15053] gi|225162357|gb|EEG74976.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM 15053] Length = 312 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 155/306 (50%), Positives = 214/306 (69%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L + I + D D +L+E++ EE+D S ++E +Q + + E + Sbjct: 1 MKELKDLQELVKTIHSLYDGYEDINLLIEMSYEENDASAVKEMEAEIQSFEEQFEALRIR 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE D+ +A + +HAGAGGTES DWA ML RMY+R+AE++ + E L+ DG+ GI Sbjct: 61 TLLSGEYDACNAIVTIHAGAGGTESCDWAGMLYRMYSRFAERKGYSMEVLDYLDGDITGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T +KG NAYG+LK E+GVHRLVRISP+++ +R TSF+S V P ++D I+IEI++ Sbjct: 121 KTVTFEVKGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 + +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A ML+ KL Sbjct: 181 EELKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHFNKEKAMQMLKVKLQ 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++ E + EIG+G QIRSYV+QPY MVKD RTN E ++ + VLDG +D Sbjct: 241 LLKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNEECSNVTAVLDGGIDM 300 Query: 346 FMKATL 351 F+ A L Sbjct: 301 FINAYL 306 >gi|304407676|ref|ZP_07389327.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9] gi|304343159|gb|EFM09002.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9] Length = 329 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 161/321 (50%), Positives = 218/321 (67%), Gaps = 4/321 (1%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ ++ E + + + +++ D +LE+ EE D S E ++ + Sbjct: 4 PDFWDDNDKAQAVISEMNAVKSTVEKYEKLAGDHDDLSTMLEMVEEEGDDSFESELTEGV 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + + + LL+ D +A LE+H GAGGTESQDW ML RMYTRWAEK FK Sbjct: 64 ESLVKRISDFELTLLLNQPYDKLNAILELHPGAGGTESQDWGQMLYRMYTRWAEKSGFKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ G+EAGIKS T+ IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V Sbjct: 124 ELLDYLPGDEAGIKSVTISIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P ++D IEIEI D ++DTYRASGAGGQHVN T+SA+RITHIP+G++V CQ +RSQ +N Sbjct: 184 PEIEDDIEIEIRTEDLKVDTYRASGAGGQHVNKTESAIRITHIPSGIIVACQTQRSQIQN 243 Query: 273 KAQAWNMLRAKLYELELQKREE-IANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 + QA MLR+KLYE +++++++ +A I GE S +I WG QIRSYV PY MVKD RT++ Sbjct: 244 REQAMKMLRSKLYERKIEEQQKHLAEIRGEQS--DIAWGSQIRSYVFHPYSMVKDHRTSV 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + V+DGDLD F+ L Sbjct: 302 ETGNVGAVMDGDLDAFIDGYL 322 >gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3] gi|123751448|sp|Q2JEW7|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3] Length = 366 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 155/350 (44%), Positives = 218/350 (62%), Gaps = 4/350 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R L + DP LW + A+ + R I+ ++ Sbjct: 11 QLDATLTGIETVLDVEGLRRRAEDLERQAADPDLWSDQDRAQAVTRRLSSTRGDIARVEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D + A + D +L E + +L R+ ++ + +LLSGE D DA +++ Sbjct: 71 LRRRLDD----IAAAADLGDEDLLAEAAADLPRLSSDIAGLEVRTLLSGEYDERDAIVQL 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT +K P AYG L Sbjct: 127 SAGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKAPYAYGTL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S ++I + D RID +R+SG GGQ Sbjct: 187 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 246 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 247 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRITG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ +G QIR+YVL PYQMVKDLRT+ E ++ S VLDG+LDDF+ A + Sbjct: 307 GPQDVSFGSQIRNYVLHPYQMVKDLRTDTETSNTSGVLDGELDDFIDAEI 356 >gi|227872846|ref|ZP_03991157.1| peptide chain release factor RF2 [Oribacterium sinus F0268] gi|227841316|gb|EEJ51635.1| peptide chain release factor RF2 [Oribacterium sinus F0268] Length = 378 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 158/346 (45%), Positives = 218/346 (63%), Gaps = 2/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L D D +R+ L+ E+P W + +A L E +HL + + ++ Sbjct: 18 LQQLEAALDLDTKRKRIIELDRMMEEPDFWGDPEKANKLSTEARHLKDELEGFTALKGNY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L+++ EE+D S++ E + L ++ LLSGE DS + L ++AGAG Sbjct: 78 EDIEALIQMGKEENDDSVIPEIRELLDSFSERLDQMNTTLLLSGEYDSMNVILRLNAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DWA +L RMYTRWAE+ F + L+ DG+EAGIKS T+ + G AYG+L+ E G Sbjct: 138 GTEANDWAGILYRMYTRWAERHGFTVKILDYLDGDEAGIKSVTMEVVGEYAYGYLRSESG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+++ +R TSF S V P ++ I+IEI E D +++ +RASGAGGQH+N T Sbjct: 198 IHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDIEIREEDIKMEVFRASGAGGQHINKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTE 305 SAVR+ HIPTG V CQ+ERSQ +NK +A ML+ KLY E +++E ++A I K Sbjct: 258 SSAVRLIHIPTGFVAACQEERSQLQNKNKAMQMLKTKLYLKEKEEQEAKLAGIRGEVKDN 317 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYVLQPY+MVKDLRT E + VLDGD+D F+ A L Sbjct: 318 -GWGSQIRSYVLQPYRMVKDLRTGEESGNTDAVLDGDIDRFISAYL 362 >gi|37520802|ref|NP_924179.1| peptide chain release factor 2 [Gloeobacter violaceus PCC 7421] gi|35211797|dbj|BAC89174.1| peptide chain release factor [Gloeobacter violaceus PCC 7421] Length = 354 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 146/339 (43%), Positives = 218/339 (64%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD R++ L + P W + A+ ++ +L + ++ L D ++ Sbjct: 10 IFDVAQRQIRIAALEQQASAPDFWDDQAAAQKALQNLNNLKQPLEQFGRWRNLLSDAEVV 69 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LEL E D S+L E N++ + E++ + E LLSG D A L ++AGAGGT++QD Sbjct: 70 LELVQETGDESLLPEAEGNIEALVGELDRWELEQLLSGPYDERGAILSINAGAGGTDAQD 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRWAE++ ++ LE+ +GEEAG+KSATL I G AYG+L E+G HRLVR Sbjct: 130 WAEMLLRMYTRWAERQGYQAHLLELSEGEEAGVKSATLEIDGRYAYGYLSAEKGTHRLVR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V PV+DDS++++I D IDT+R+ G GGQ+VN ++ VR+ Sbjct: 190 ISPFNANDKRQTSFAGVEVMPVLDDSVQVDIRPDDIEIDTFRSGGKGGQNVNKVETGVRV 249 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH PTG+ V+C QER+Q +N+ +A ML+A+L LE +KR++ + + WG QI Sbjct: 250 THKPTGISVRCTQERAQLQNRNKAMEMLKARLLVLEEEKRQQHLSDIRGEAVDAAWGNQI 309 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYV PYQMVKDLRT E + + V++G ++ F++ L Sbjct: 310 RSYVFHPYQMVKDLRTEEETSDVTGVMNGKIEPFIERYL 348 >gi|313679114|ref|YP_004056853.1| bacterial peptide chain release factor 2 (brf-2) [Oceanithermus profundus DSM 14977] gi|313151829|gb|ADR35680.1| bacterial peptide chain release factor 2 (bRF-2) [Oceanithermus profundus DSM 14977] Length = 370 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 169/351 (48%), Positives = 219/351 (62%), Gaps = 7/351 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L+ LGG+FD RL L + LW + A+ L +E L + ++ Sbjct: 5 ELKQKLDALGGIFDIAGKKARLEELEKELGQEGLWDDPAAAQKLTQEAARLKKVVEEYEQ 64 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L + L + A E+ S+ E + + KLE Y Q +LL E +A L + Sbjct: 65 LSGDLESLIELWDEASPEERESLEPELEEAAK--KLEDLYHQ--TLLGFEHAEKNAILTI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTE+ DWA MLLRMYTRWAE+ FK E +++ G EAGI SA L+++G NAYG L Sbjct: 121 KPGAGGTEAMDWAEMLLRMYTRWAERHGFKVELVDVTPGPEAGIDSAELIVRGENAYGLL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHRLVR SP+DS RRHTSF+S+ V P VDD++EIEI D RID +RA G GGQ Sbjct: 181 SAERGVHRLVRPSPFDSTGRRHTSFASVEVSPEVDDTVEIEIKPEDLRIDVFRAQGHGGQ 240 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGE 300 VNTTDSAVRI H+PTG++V Q RSQHKNK A +L+++L+E E QKR EE+A + Sbjct: 241 GVNTTDSAVRIVHLPTGIIVTSQATRSQHKNKELAMKVLKSRLFEREWQKRQEEMAKLRG 300 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K I WG QIRSYVL Q VKD RT + + P VLDGDLDD + A L Sbjct: 301 EQKA-IEWGSQIRSYVLD-KQYVKDHRTGLMRHDPDKVLDGDLDDLIWAGL 349 >gi|239941657|ref|ZP_04693594.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 15998] gi|239988119|ref|ZP_04708783.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 11379] Length = 352 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 157/351 (44%), Positives = 220/351 (62%), Gaps = 5/351 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW + A+ + + HL + + ++ R+ Sbjct: 1 MGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEALRGRI 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L ELA E D E L+ +K ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + + K + Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMN-ALKGDG 297 Query: 307 G--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 298 GNSWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 348 >gi|313675052|ref|YP_004053048.1| bacterial peptide chain release factor 2 (brf-2) [Marivirga tractuosa DSM 4126] gi|312941750|gb|ADR20940.1| bacterial peptide chain release factor 2 (bRF-2) [Marivirga tractuosa DSM 4126] Length = 363 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 150/349 (42%), Positives = 219/349 (62%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D++ V+ + L + P W + EA+ M+ Q L E+ Sbjct: 9 LKARVEALRGYLDYNKKVEEIKELELVSAQPDFWNDSDEAEKTMKVIQGLKEWTKHFDEL 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + E LE + S +E S ++ + E + + +LS E D A L++ Sbjct: 69 SELYGEVETYYEF-LEMGESS-EEEVSKAYKKALTKTEELELKKMLSSEEDQLSAMLQIT 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA +L+RMY W E +K ++ +G+ AG+KS TL GP AYG+LK Sbjct: 127 PGAGGTESNDWAGILMRMYIMWGEANGYKVREVDFQEGDVAGVKSVTLEFDGPQAYGFLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+S++VYPVVDDSIEI+I +D + T R+ GAGGQ+ Sbjct: 187 SENGVHRLVRISPFDSGGRRHTSFASVYVYPVVDDSIEIDIHPNDVELHTSRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+VV CQ R+Q N+ +A ML+++LY++E++KR N E+ Sbjct: 247 VNKVETKVQLTHKPTGIVVVCQANRTQLGNREEAMKMLKSQLYQIEVEKRSAERNEVEAG 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I +G QIR+YVL PY+++KD RT +E+T +VLDGDL+D++KA L Sbjct: 307 KKKIDFGSQIRNYVLHPYKLIKDARTGVERTDVQNVLDGDLNDYIKAYL 355 >gi|56751121|ref|YP_171822.1| peptide chain release factor 2 [Synechococcus elongatus PCC 6301] gi|56686080|dbj|BAD79302.1| peptide chain release factor RF-2 [Synechococcus elongatus PCC 6301] Length = 304 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 146/286 (51%), Positives = 201/286 (70%), Gaps = 2/286 (0%) Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +LEL E D ++ +E N+QR++ E++ + + LLSG D+ A L ++AGAG Sbjct: 8 ADITAILELLAIEPDPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILSINAGAG 67 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GT++QDWA MLLRMYTRWAE + +K E+ +GEEAGIKS TL I+G AYG+LK E+G Sbjct: 68 GTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGYLKAEKG 127 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+++N +R TSF+ + V PV+D I++EI E D I T RA G GGQ+VN Sbjct: 128 THRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRAGGKGGQNVNKV 187 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK-LYELELQKREEIANIGESSKTE 305 ++AVRI H+PTG+ V+C +ERSQ +NK +A +LRAK L L+ QK +E+A I E Sbjct: 188 ETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILRAKLLVVLQEQKAKEVAEI-RGDMVE 246 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIR+YV PYQ+VKDLRT +E + +DV++GDL+ F++A L Sbjct: 247 AAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYL 292 >gi|313847717|emb|CBY16707.1| putative peptide chain release factor 2 [Chlamydophila psittaci RD1] Length = 368 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 170/351 (48%), Positives = 226/351 (64%), Gaps = 9/351 (2%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L G D + Q LS L +T WQ+V A + L IS +E + R+ Sbjct: 16 LALAGRSLDLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIASLKRQISHYEEFKVRV 75 Query: 67 CDNLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFES--LLSGEADSNDAYLEVH 122 DNL L + D S E ++L++ E ++E+ LLSGE D N +L ++ Sbjct: 76 -DNLAFF---LNDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DW ML RMY RWA + ++K E ++ +G+ AGIK T+ G AYG+ K Sbjct: 132 AGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I +D RIDT+R+SGAGGQH Sbjct: 192 AERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITHIPTG++V CQ+ERSQ +N+ MLRA++Y+ LQ+R E I + Sbjct: 252 VNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLIDRKN 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 K EI WG QIR+YV QPY +VKD+RT E + ++DG+ LDDF+KA LA Sbjct: 312 KKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 362 >gi|218439666|ref|YP_002377995.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424] gi|218172394|gb|ACK71127.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424] Length = 360 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 156/341 (45%), Positives = 226/341 (66%), Gaps = 3/341 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD ++ L + P W + A+ ++E L +++ ++ Q +L D + Sbjct: 14 IFDLPALKAKIKDLEQRAAQPEFWDSPETAQSTLQELNELKSSLELYQQWQTQLEDAKAI 73 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 EL E+D S+LQE NLQ++ E+E + + LLSG D+ L ++AGAGGT++QD Sbjct: 74 SELLELEEDTSLLQEAQTNLQQLNHELERWELQQLLSGPYDAKGVLLTINAGAGGTDAQD 133 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRW EKR +K +E +G+EAGIKSATL I+G AYG+LKGE+G HRLVR Sbjct: 134 WAAMLLRMYTRWGEKRGYKVHLVESSEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLVR 193 Query: 193 ISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 ISP+++N +R TSF+ + + P + ++++ +EI E D I T RA G GGQ+VN ++AVR Sbjct: 194 ISPFNANGKRQTSFAGVEIMPNIEEEALNVEIPEKDLEITTSRAGGKGGQNVNKVETAVR 253 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310 + H+PTG+ V+C +ERSQ +NK +A +L+AKL + +++R +EIA I E WG Sbjct: 254 VVHLPTGIAVRCTEERSQLQNKEKALALLKAKLLVIAVEQRAQEIAEI-RGDMVEAAWGN 312 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRTN+E + V+DGDLD F++A L Sbjct: 313 QIRNYVFHPYQMVKDLRTNVETSDIGAVMDGDLDAFIEAYL 353 >gi|332295608|ref|YP_004437531.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM 14796] gi|332178711|gb|AEE14400.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM 14796] Length = 363 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 156/345 (45%), Positives = 225/345 (65%), Gaps = 11/345 (3%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 +CL D DN +++L + +P +WQ+V ++ L + +L +I + Sbjct: 18 DCL----DLDNKIKKLEEIRNDLSNPEIWQDVQKSSNLTQLADNLQKSIDEWNNLNSSFE 73 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L E E + I E+ NL +I E+E K +LLSG+ DS DA L + AGAGG Sbjct: 74 DFLFWTEFQDEGAENEI-AESYKNLVKILEELEVK---ALLSGKYDSYDAMLSISAGAGG 129 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ++QD+A MLLRMY RW EK K+ E ++ G+EAGI+SAT+ KG +YG+LK EQGV Sbjct: 130 VDAQDFAEMLLRMYIRWGEKNKYSVELVDQSPGDEAGIRSATIFFKGKYSYGFLKSEQGV 189 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+R+SP+D N+RRHTSF + V P++++ EI + + +I+T+RASGAGGQHVN TD Sbjct: 190 HRLIRLSPFDFNNRRHTSFVLVEVTPLIENVKEINVKNEEIKIETFRASGAGGQHVNKTD 249 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEI 306 SAVRITH+PTG+VV C+ ERSQ +NK A +L ++L L E +++++++ +T+ Sbjct: 250 SAVRITHLPTGIVVTCRNERSQFQNKEAAMKILISRLNSLYEEKQKDKMSEF--KGETDA 307 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG+QIR+YV+ PY MVKD RTN+E VLDG++D+F KA L Sbjct: 308 SWGKQIRTYVMHPYTMVKDHRTNVEIGDVYGVLDGNIDEFQKAFL 352 >gi|322411427|gb|EFY02335.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 327 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 150/317 (47%), Positives = 207/317 (65%), Gaps = 2/317 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + I A+ ++ L + +Q+ + + LE+ LEEDD S+ + +L+ Sbjct: 6 FWNDNIAAQKTSQKLNELKSTYETFHNMQELSDETELYLEM-LEEDD-SVKDDLEASLET 63 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + FK E Sbjct: 64 LGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFKVET 123 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF S+ V P Sbjct: 124 LDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSVEVMPE 183 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ N+ Sbjct: 184 LDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRD 243 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 +A ML+AKLY+LE +K+ N + K EI WG QIRSYV PY MVKD RTN E Sbjct: 244 RAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYEVAQ 303 Query: 335 PSDVLDGDLDDFMKATL 351 V+DGD++ F+ A L Sbjct: 304 VDKVMDGDIEGFIDAYL 320 >gi|258507895|ref|YP_003170646.1| peptide chain release factor 2 [Lactobacillus rhamnosus GG] gi|257147822|emb|CAR86795.1| Peptide chain release factor 2 [Lactobacillus rhamnosus GG] gi|259649221|dbj|BAI41383.1| protein chain release factor B [Lactobacillus rhamnosus GG] Length = 332 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 153/326 (46%), Positives = 214/326 (65%), Gaps = 12/326 (3%) Query: 32 DPHLW------QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +P W Q VI+A ++E+ D + E++D LEL +E D + Sbjct: 3 EPGFWDDSEAAQKVIDANNKLKEKH--DRFYALENELEDLEAG----LELLQDEPDPDLQ 56 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E L+ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW +ML+RMY RWA Sbjct: 57 REEETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWA 116 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 ++ FK E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS RRHTS Sbjct: 117 DQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTS 176 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +D+SIE++I D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V Q Sbjct: 177 FASVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQA 236 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQ +NKA A ML+AKLY+ E + ++ A + + ++ +G QIRSYV PY MVKD Sbjct: 237 QRSQFQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKD 296 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RTN E + V+DGDL+ F+ A L Sbjct: 297 HRTNYETGNGQAVMDGDLNPFINAYL 322 >gi|199597236|ref|ZP_03210667.1| Protein chain release factor B [Lactobacillus rhamnosus HN001] gi|229551742|ref|ZP_04440467.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1] gi|258539140|ref|YP_003173639.1| peptide chain release factor B-like protein [Lactobacillus rhamnosus Lc 705] gi|199591752|gb|EDY99827.1| Protein chain release factor B [Lactobacillus rhamnosus HN001] gi|229314873|gb|EEN80846.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1] gi|257150816|emb|CAR89788.1| Peptide chain release factor 2 [Lactobacillus rhamnosus Lc 705] Length = 332 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 153/326 (46%), Positives = 213/326 (65%), Gaps = 12/326 (3%) Query: 32 DPHLW------QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +P W Q VI+A ++E+ D + E++D LEL +E D + Sbjct: 3 EPGFWDDSEAAQKVIDANNKLKEKH--DRFYALENELEDLEAG----LELLQDEPDPDLQ 56 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L+ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW +ML+RMY RWA Sbjct: 57 HEEETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWA 116 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 ++ FK E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS RRHTS Sbjct: 117 DQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTS 176 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +D+SIE++I D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V Q Sbjct: 177 FASVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQA 236 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQ +NKA A ML+AKLY+ E + ++ A + + ++ +G QIRSYV PY MVKD Sbjct: 237 QRSQFQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKD 296 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RTN E + V+DGDL+ F+ A L Sbjct: 297 HRTNYETGNGQAVMDGDLNPFINAYL 322 >gi|295100603|emb|CBK98148.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium prausnitzii L2-6] Length = 373 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 146/335 (43%), Positives = 212/335 (63%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D + +R+ L P + + +K + E L ++ +++Q D +L + Sbjct: 28 DASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLYDDAETMLVML 87 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 EE D ++ E + + + V+ Q ++L+GE D ++A L HAG GGTE+QDWA M Sbjct: 88 DEEYDPEMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTGGTEAQDWAEM 147 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY +WA+ E L+ DG+EAG+KSA++++KG NAYG LK E GVHRLVR+SP+ Sbjct: 148 LYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENGVHRLVRVSPF 207 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 D+N+RR TSF+S+ V P +D++I+++I D + YR+SGAGGQH+N T SAVR+ H P Sbjct: 208 DANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVYRSSGAGGQHINKTSSAVRLIHKP 267 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TG+VV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + EI WG QIRSYV Sbjct: 268 TGIVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYV 327 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 328 FMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYL 362 >gi|117928939|ref|YP_873490.1| peptide chain release factor 2 [Acidothermus cellulolyticus 11B] gi|166223620|sp|A0LVP4|RF2_ACIC1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|117649402|gb|ABK53504.1| bacterial peptide chain release factor 2 (bRF-2) [Acidothermus cellulolyticus 11B] Length = 369 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 148/325 (45%), Positives = 213/325 (65%), Gaps = 3/325 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP LW + A+ + L I ++ ++ RL D ++L ELA E+D Sbjct: 36 LERQAADPGLWNDPENAQRVTSRLSFLQAEIRRVEGLRKRLDDVMVLFELAEAENDEPTR 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + ++ ++ + +LLSGE D+ +A + +++ AGG ++ DWA MLLRMY RWA Sbjct: 96 TEALAEMAALQKAIDDLEVRTLLSGEYDAREALVTINSQAGGVDAADWAQMLLRMYLRWA 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ + TE L+ EEAGIKSAT ++ P YG L E G HRLVRISP+D+ +RR TS Sbjct: 156 ERHGYPTEILDTSYAEEAGIKSATFIVHAPFTYGLLAAEHGTHRLVRISPFDNQARRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+ + V PVV+ + I+I E + R+D +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ Sbjct: 216 FAGVDVVPVVEKTDHIDIPEDEIRVDVFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQN 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ +N+A A +L+A+L LE +++EE A + +T WG QIR+YVL PYQ+VK Sbjct: 276 ERSQLQNRATAMMVLQARL--LERRRQEEAAKLAALRGETTTSWGTQIRNYVLHPYQLVK 333 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKA 349 DLRT +E ++ + VLDG++D+F+ A Sbjct: 334 DLRTEVETSNTAGVLDGEIDEFIDA 358 >gi|299472049|emb|CBN80132.1| conserved unknown protein [Ectocarpus siliculosus] Length = 466 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 150/336 (44%), Positives = 216/336 (64%), Gaps = 6/336 (1%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL+ L+ DP L+ + +A +++ER +++ + +K + L + E+A E++ Sbjct: 119 RLAELDALVSDPKLYDDSTKAGKIVKERAKVESKLENVKSLNSELQSWREMYEMASLEEE 178 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLR 139 +L E + + ++ + E + E+LLS GE +++ YLE+ AGAGGTES DW +ML + Sbjct: 179 GDLLTECIEKVGALRKQAERARAETLLSLGGELSASNCYLELQAGAGGTESHDWTSMLYK 238 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MYTRWAE + F + L G+EAG++S + ++G +AYGWL+ E GVHRLVR SPYD N Sbjct: 239 MYTRWAETKAFTLQPLNSSPGDEAGLRSVMVFVEGESAYGWLRSEAGVHRLVRNSPYDPN 298 Query: 200 SRRHTSFSSIWVYPVVD----DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 RRHTSFS + V+P D+ ++EI D ++DT RA GAGGQHVNTTDSAVR+TH+ Sbjct: 299 GRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQHVNTTDSAVRLTHL 358 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 PTG+V Q +RSQHKN+ A LRAK+++ + ++R N + + +G QIRSY Sbjct: 359 PTGLVALSQSDRSQHKNRENAMRALRAKIFQRKEEERHAKRNEYAAGLGDNAFGNQIRSY 418 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VL PYQMVKD RT ++ S VLDG LD F+ A L Sbjct: 419 VLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAAL 454 >gi|227535953|ref|ZP_03966002.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum ATCC 33300] gi|300771659|ref|ZP_07081534.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum ATCC 33861] gi|227244196|gb|EEI94211.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum ATCC 33300] gi|300761648|gb|EFK58469.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum ATCC 33861] Length = 283 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 138/266 (51%), Positives = 196/266 (73%) Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 QE Q ++E +F+++LS E D DA L++ AGAGGTES DWA ML+RMY W Sbjct: 13 QELESQYQTALQDIEELEFKNMLSAEEDQLDAILQITAGAGGTESCDWAAMLMRMYIMWG 72 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK K + +G+ AGIK+ TL G AYG+LKGE GVHRLVRISP+DSN++RHTS Sbjct: 73 EKHGCKVTEQDSQEGDVAGIKTVTLQFSGNFAYGYLKGENGVHRLVRISPFDSNAKRHTS 132 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S++VYP++DD+IEI++ +S+ DT+R+ GAGGQ+VN ++AVR+ H PTG++++ Q+ Sbjct: 133 FASVYVYPLIDDNIEIDVKDSEIEWDTFRSGGAGGQNVNKVETAVRLHHKPTGIIIKNQE 192 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 RSQ +NK A +L+++LYE+E++KR+E + E SK +I WG QIR+YVL PY++VKD Sbjct: 193 TRSQLQNKENALRLLKSQLYEIEMRKRQEATAVIEGSKKKIEWGSQIRNYVLHPYKLVKD 252 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT++E ++ VLDGD+D F+KA L Sbjct: 253 LRTSVETSNTQAVLDGDIDMFLKAYL 278 >gi|302524557|ref|ZP_07276899.1| peptide chain release factor 2 [Streptomyces sp. AA4] gi|302433452|gb|EFL05268.1| peptide chain release factor 2 [Streptomyces sp. AA4] Length = 376 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 157/353 (44%), Positives = 223/353 (63%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L + + D + +++ L + P LW NV EA+ + + H + + E+ Sbjct: 21 LTGKLTQIESVMDLEALRAQVAELEEQASSPTLWDNVEEAQKVTSQLSHRQAELRRVSEL 80 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA +E D + E +L + +++ + +LLSGE D +A + + Sbjct: 81 RQRLDDLGVLYELAADEGDSGSMTEAEGDLADLAKDIDALEVRTLLSGEYDDRNAVVNIR 140 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ + T+ +I EEAGIKSAT + P YG L Sbjct: 141 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVFDISYAEEAGIKSATFKVTAPYVYGTLS 200 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V P V++ ++I E D R+D YR+SG GGQ Sbjct: 201 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDIPEKDIRVDVYRSSGPGGQS 260 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+A+L L+ +K EE A + Sbjct: 261 VNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKAAAMKVLQARL--LQRKKEEERAEMDALK 318 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + +K Sbjct: 319 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPTAVLDGDIDGFLEAGIRWRK 371 >gi|218132301|ref|ZP_03461105.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC 43243] gi|217992816|gb|EEC58817.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC 43243] Length = 333 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 152/321 (47%), Positives = 222/321 (69%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P W + +++ M+E + L ++ E++ + D L+ +A EE+D S++ E + Sbjct: 2 EAPGFWDDADKSQEAMKELKSLKDSFEKYNELKQGMDDIETLIAMADEENDESLVPEVEE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + + + + +LLSGE D ++A L +HAGAGGTE+ DW ML+RMYTRWAE + + Sbjct: 62 EFNVFEKKFDALRIGTLLSGEYDRDNAILTLHAGAGGTEACDWCQMLMRMYTRWAESKGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 KTE ++ +G+EAG+K+ T+ I+G NAYG+L+ E G+HRLVRISP+++ +R TSF S Sbjct: 122 KTEVVDYLEGDEAGVKAVTIEIEGENAYGYLRSEHGIHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQH Sbjct: 182 VMPDIEEDVDVEINDDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK +A ML+AKLY L+ Q+ E + ++ +G QIRSYVLQPY MVKD RTN Sbjct: 242 QNKDKAMQMLKAKLYLLKKQENAEKTSDIRGDVKDVNFGSQIRSYVLQPYTMVKDHRTNE 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDG++D F+ A L Sbjct: 302 EVGNAQSVLDGNIDPFITAYL 322 >gi|294785988|ref|ZP_06751275.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27] gi|294486325|gb|EFG33688.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27] Length = 308 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 149/298 (50%), Positives = 210/298 (70%), Gaps = 1/298 (0%) Query: 54 NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 N +S +++ + D +L++ +E + S E + +K ++E + LL GE D Sbjct: 6 NIVSRYEKLATEIDDEEVLIDF-VESGEASFENELQTKHKILKSDIEEFEINLLLDGEYD 64 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ G+KS T L++ Sbjct: 65 MNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTFLVE 124 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDTY Sbjct: 125 GINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPTDIRIDTY 184 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ N+ A ML++KL ELE++K+E Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKKE 244 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E + +++IGWG QIRSYV QPY +VKD RTN E + V+DG +DDF+ + L Sbjct: 245 EEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYL 302 >gi|315221796|ref|ZP_07863708.1| peptide chain release factor 2 [Streptococcus anginosus F0211] gi|315189029|gb|EFU22732.1| peptide chain release factor 2 [Streptococcus anginosus F0211] Length = 325 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 148/320 (46%), Positives = 203/320 (63%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L +++ D ++ ILL+ E+D E Sbjct: 3 EPDFWDDNIAAQKTSQELNELKQTYDNFQQMADLFDESEILLDFLAEDDSVQEELEEKLA 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 K+ Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ FK Sbjct: 63 ELETKM-TSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEIE+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q+ Sbjct: 181 MPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A +L+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT E Sbjct: 241 NRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTGFE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGD+D F+ A L Sbjct: 301 VAQVDKVMDGDIDGFIDAYL 320 >gi|305667119|ref|YP_003863406.1| peptide chain release factor 2 [Maribacter sp. HTCC2170] gi|88708053|gb|EAR00291.1| peptide chain release factor 2 [Maribacter sp. HTCC2170] Length = 313 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 135/255 (52%), Positives = 192/255 (75%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E +F+++LS E D A L++ AGAGGTES DWA ML+RMY W++K FK + L Sbjct: 52 IEKLEFKNMLSEEGDELTAVLQITAGAGGTESCDWAAMLMRMYMMWSQKNGFKVKELNYQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+ AGIK+ TL ++G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDS Sbjct: 112 EGDVAGIKTVTLEVEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDS 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEI+++ +D I T R+SGAGGQ+VN ++ V++ H P+G+ +QC RSQH N+A A Sbjct: 172 IEIDVNPADIEITTARSSGAGGQNVNKVETKVQLVHKPSGIQIQCSDSRSQHDNRATAMK 231 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 ML+++LYE+EL+K+ E ESSK +I WG QIR+YV+ PY++VKD+RT+ E + V Sbjct: 232 MLKSQLYEIELRKKMEAREEIESSKMKIEWGSQIRNYVMHPYKLVKDVRTSEETGNVDAV 291 Query: 339 LDGDLDDFMKATLAI 353 +DG++D F+KA L + Sbjct: 292 MDGNIDQFLKAFLMM 306 >gi|34762942|ref|ZP_00143922.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887403|gb|EAA24493.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 308 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 150/298 (50%), Positives = 210/298 (70%), Gaps = 1/298 (0%) Query: 54 NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 N +S +++ + D +L++ +E + S E + +K ++E + LL GE D Sbjct: 6 NIVSRYEKLATEIDDEEVLIDF-VESGEASFENELQTKHKILKSDIEEFEINLLLDGEYD 64 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ GIKS T L++ Sbjct: 65 INNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGIKSVTFLVE 124 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDTY Sbjct: 125 GINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRIDTY 184 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ N+ A ML++KL ELE++K+E Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKKE 244 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E + +++IGWG QIRSYV QPY +VKD RTN E + V+DG +DDF+ + L Sbjct: 245 EEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYL 302 >gi|24379740|ref|NP_721695.1| peptide chain release factor 2 [Streptococcus mutans UA159] gi|24377701|gb|AAN59001.1|AE014966_11 putative peptide chain release factor (RF-2) [Streptococcus mutans UA159] Length = 325 Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 210/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L +Q+ L D LL+ LEEDD S+ E ++ Sbjct: 3 EPDFWDDNIAAQKTSQELNELKLKYETFNSMQE-LSDETELLQEMLEEDD-SLQGELEED 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + L+ G+EAGIKS L +G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VDVLDYQAGDEAGIKSVALSFEGQNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIP+G+VV +R+Q+ Sbjct: 181 MPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + + K EI WG QIRSYV PY MVKD RTN E Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG+LD F+ A L Sbjct: 301 VSQVDRVMDGELDGFIDAFL 320 >gi|319946614|ref|ZP_08020848.1| peptide chain release factor RF2 [Streptococcus australis ATCC 700641] gi|319746662|gb|EFV98921.1| peptide chain release factor RF2 [Streptococcus australis ATCC 700641] Length = 325 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 206/320 (64%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L ++ D ++ ILLE L ED+ + Sbjct: 3 EPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLEF-LSEDESVHEELEEKL 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ K+ Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ FK Sbjct: 62 IELDKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTSYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGD+D F+ A L Sbjct: 301 VAQVDKVMDGDIDGFIDAYL 320 >gi|81299215|ref|YP_399423.1| peptide chain release factor 2 [Synechococcus elongatus PCC 7942] gi|81168096|gb|ABB56436.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus elongatus PCC 7942] Length = 304 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 145/286 (50%), Positives = 201/286 (70%), Gaps = 2/286 (0%) Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +LEL E D ++ +E N+QR++ E++ + + LLSG D+ A L ++AGAG Sbjct: 8 ADITAILELLAIEPDPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILSINAGAG 67 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GT++QDWA MLLRMYTRWAE + +K E+ +GEEAGIKS TL I+G AYG+LK E+G Sbjct: 68 GTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGYLKAEKG 127 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+++N +R TSF+ + V PV+D I++EI E D I T RA G GGQ+VN Sbjct: 128 THRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRAGGKGGQNVNKV 187 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK-LYELELQKREEIANIGESSKTE 305 ++AVRI H+PTG+ V+C +ERSQ +NK +A +L+AK L L+ QK +E+A I E Sbjct: 188 ETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILKAKLLVVLQEQKAKEVAEI-RGDMVE 246 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIR+YV PYQ+VKDLRT +E + +DV++GDL+ F++A L Sbjct: 247 AAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYL 292 >gi|312879986|ref|ZP_07739786.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas paucivorans DSM 12260] gi|310783277|gb|EFQ23675.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas paucivorans DSM 12260] Length = 374 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 157/342 (45%), Positives = 213/342 (62%), Gaps = 1/342 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D A R+ L + DP W +A+ RE L + + L + L Sbjct: 24 LDLPAAETRIEGLLKQAADPEFWTRE-DAQETTRELAQLQQKRESWETLNRELQEMETLA 82 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 L E +D + +E + E+E +Q LL E D +DA + +HAGAGG +SQDW Sbjct: 83 ALLAEGEDVDLEEEFYRRAGAFEKELERRQIFVLLDEEYDRSDAIVTIHAGAGGLDSQDW 142 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 +L RMY RW EK FK+ L+ +EAGIKS T + G AYG+LKGE+GVHRLVRI Sbjct: 143 TEILSRMYLRWVEKEGFKSRILDQLADQEAGIKSITFEVLGDYAYGYLKGEKGVHRLVRI 202 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RRHTSF+S+ V PV+ + +IEI D ++DT+R+SGAGGQ+VN TDSAVRIT Sbjct: 203 SPFDAAKRRHTSFASVEVLPVLPEDADIEIRPEDLKMDTFRSSGAGGQYVNMTDSAVRIT 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG++V CQ ERSQH N+A A +L++KL+E +LQ+R+E + K I WG QIR Sbjct: 263 HIPTGIIVSCQVERSQHMNRATALQVLKSKLFERQLQERQEHLESLQGEKRSIAWGSQIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 SY LQP+Q+VKD R+ E + + VLDGDL++ + +TL K Sbjct: 323 SYTLQPFQLVKDHRSGCEVGNVAAVLDGDLEELIMSTLRFFK 364 >gi|240168635|ref|ZP_04747294.1| peptide chain release factor 2 [Mycobacterium kansasii ATCC 12478] Length = 376 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 163/354 (46%), Positives = 225/354 (63%), Gaps = 8/354 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ L + DP LW + A+ + E H + ++++ Sbjct: 16 LDSTLTTVERVLDVDALRAKIDKLEHEASDPKLWDDQARAQRVTSELSHAQGELRRVEQL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE+ + + ++ +K E+E + +LLSGE D +A + Sbjct: 76 RSRLDDLPVLYELAAEEEGEAAAEALAEADAELKALHAEIEATEVRTLLSGEYDEREALV 135 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 136 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 195 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 196 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 255 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + Sbjct: 256 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LERKRLEERAEL- 312 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 313 DALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGI 366 >gi|224533030|ref|ZP_03673636.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23] gi|224512024|gb|EEF82419.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23] Length = 269 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 142/264 (53%), Positives = 192/264 (72%), Gaps = 10/264 (3%) Query: 97 LEVEY----KQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 +E+E+ KQ++ LL+ E D+N+A+L +H+GAGGTE+ DW ML RMY+R+AE+ Sbjct: 1 MEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RISP+D+ +RHTSF+ Sbjct: 61 KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++V PV+DD IEI I D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R Sbjct: 120 SVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK A +L+++LYE K +E + +K EI WG QIRSYV QPY +VKD R Sbjct: 180 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T E ++ + V+DG++D+F++ L Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYL 263 >gi|332531395|ref|ZP_08407299.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624] gi|332039064|gb|EGI75486.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624] Length = 248 Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 141/245 (57%), Positives = 186/245 (75%), Gaps = 1/245 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + + AD A+L++ AGAGGTE+ DWA+MLLR Y ++AE++ FK + G+ AGIK Sbjct: 1 MFNNPADPLPAFLDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEDETPGDTAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I+G A+G L+ E GVHRLVR SP+DS+ RHTSF+SI+VYP +DD+IEIEI+ + Sbjct: 61 SATIKIEGDYAFGLLRTETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDTIEIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYD 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR E E +KT++GWG QIRSYVL + +KDLRTN E ++ VLDGDLD F Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWGHQIRSYVLDQSR-IKDLRTNYETSATQKVLDGDLDPF 239 Query: 347 MKATL 351 ++A+L Sbjct: 240 IEASL 244 >gi|257438202|ref|ZP_05613957.1| peptide chain release factor 2 [Faecalibacterium prausnitzii A2-165] gi|257199279|gb|EEU97563.1| peptide chain release factor 2 [Faecalibacterium prausnitzii A2-165] Length = 373 Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 146/335 (43%), Positives = 212/335 (63%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D + +R+ L P + + +K + E L ++ +++Q D +L + Sbjct: 28 DASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLYDDAETMLVML 87 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 EE D ++ E + + + V+ Q ++L+GE D ++A L HAG GGTE+QDWA M Sbjct: 88 DEEYDPDMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTGGTEAQDWAEM 147 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY +WA+ E L+ DG+EAG+KSA++++KG NAYG LK E GVHRLVR+SP+ Sbjct: 148 LYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENGVHRLVRVSPF 207 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 D+N+RR TSF+S+ V P +D++I+++I D + +R+SGAGGQH+N T SAVR+ H P Sbjct: 208 DANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVFRSSGAGGQHINKTSSAVRLIHKP 267 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TGVVV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + EI WG QIRSYV Sbjct: 268 TGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYV 327 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 328 FMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYL 362 >gi|312278454|gb|ADQ63111.1| Bacterial peptide chain release factor 2 (BRF-2) [Streptococcus thermophilus ND03] Length = 326 Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 204/320 (63%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L +++ + + LE+ LEEDD + Sbjct: 3 EPDFWNDNIAAQKTSQELNELKIKYETFNNMKELSDETELYLEM-LEEDDSVQEELEETL 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K+ Y + LLS D N+A LE+H G+GGTE+QDWA MLLRMY R+ + FK Sbjct: 62 EKLDKIMTSY-EMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLLRMYQRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV PY MVKD RT Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYG 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGD++ F+ A L Sbjct: 301 VAQVDKVIDGDIEGFIDAYL 320 >gi|295426388|ref|ZP_06819038.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM 11664] gi|295063756|gb|EFG54714.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM 11664] Length = 332 Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 207/320 (64%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W + +A+ L+ E L E++ D LEL EE D + +E +N Sbjct: 3 EPNFWNDQDQAQKLISETNLLKEKRDSFLELKKEYEDETTALELIKEEPDKELQEEVENN 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + L+SG+ DS++A +E+H GAGGTE+ DWA+MLLRMY R+ E FK Sbjct: 63 LTHLQSAFHNYELDLLMSGKYDSHNALVEIHPGAGGTEAMDWASMLLRMYQRYCESVGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GEEAG+KS ++ + G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 123 FEINDYEPGEEAGVKSVSIRVSGKNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ + Sbjct: 183 IPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRTN E Sbjct: 243 NRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTNYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DG L F+ A L Sbjct: 303 TADVKGVMDGKLQPFIYAYL 322 >gi|166031017|ref|ZP_02233846.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC 27755] gi|166029284|gb|EDR48041.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC 27755] Length = 318 Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 154/306 (50%), Positives = 210/306 (68%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L + I + D L+E+ EE+D S+++E ++ + + E + E Sbjct: 1 MKELKDLQEHLKVIHALYSEYDDICTLIEMVDEEEDRSMVKEIEKDIAHFEEDFEKLRIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE DS +A + +HAG GGTE+ DW NML RMYTRW + + F + L+ DG+ GI Sbjct: 61 TLLSGEYDSCNAIMTLHAGTGGTEACDWVNMLYRMYTRWFQTKGFSVQVLDYLDGDITGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T + G NAYG+LK E+GVHRLVRISP++S +R TSF+S V P +++ I+I+I E Sbjct: 121 KNITFEVVGDNAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVVPDIEEDIDIDILE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A ML+AKL Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKAKLK 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++ E + +IG+G QIRSYV+QPY +VKD RTN+E + + VLDGDLD Sbjct: 241 LLQEQEQAEKVSDIRGEVKDIGFGNQIRSYVMQPYTLVKDHRTNVENGNVTAVLDGDLDM 300 Query: 346 FMKATL 351 F+ A L Sbjct: 301 FINAYL 306 >gi|228472944|ref|ZP_04057701.1| peptide chain release factor 2, programmed [Capnocytophaga gingivalis ATCC 33624] gi|228275526|gb|EEK14303.1| peptide chain release factor 2, programmed [Capnocytophaga gingivalis ATCC 33624] Length = 366 Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 225/325 (69%), Gaps = 2/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 KT P W + +A++L+++ Q ++ ++ + + + I+L+ E + +E Sbjct: 36 KTLAPDFWDSPKQAQLLVQKLQSQKKWVTDYEKSAEMVEELQIMLDFYKE--NAISAEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 D + L +E +F ++LS E D+ A L++ AGAGGTES DWA+ML+RMY WA ++ Sbjct: 94 EDFYGQTLLHIENLEFRNMLSDEGDALSAVLQITAGAGGTESCDWASMLMRMYMMWANRQ 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F + L +G+ AG+K+ TL I G A+G+LKGE GVHRLVRISP+DSN++RHTSF+S Sbjct: 154 GFSVKELNFQEGDVAGVKTVTLEIDGEFAFGYLKGENGVHRLVRISPFDSNAKRHTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP+ DD+IEIEI+ +D +T R+SGAGGQ+VN ++AVR+ H PTG++++ + RS Sbjct: 214 VYVYPLADDTIEIEINPADISFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRS 273 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q NK +A +L+++LYE+EL+KR+ + E++K +I WG QIR+YV+ PY++VKD+R+ Sbjct: 274 QLDNKNKALQLLKSQLYEIELKKRQAKRDEIEANKMKIEWGSQIRNYVMHPYKLVKDVRS 333 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 E T+ V++G+LDDF+KA L + Sbjct: 334 GYETTNVDAVMNGELDDFLKAYLML 358 >gi|223982761|ref|ZP_03632989.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM 12042] gi|223965261|gb|EEF69545.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM 12042] Length = 327 Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 159/305 (52%), Positives = 205/305 (67%), Gaps = 18/305 (5%) Query: 65 RLCDNLILLELALEEDDCSI--LQETSDNL-----QRIK--LEVEYK----QFES----- 106 R C+ + LE + + S+ LQET D L + +K L++EY+ QFE Sbjct: 18 RQCNGMKELEAKYHQMEQSLASLQETVDELNQNFDEELKELLDMEYQDTLNQFEDFEVMV 77 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 LLS D N+A LE+H GAGGTESQDWA+ML RMY RWAE++ +K L+ +GEEAGIK Sbjct: 78 LLSHPYDKNNAILELHPGAGGTESQDWASMLYRMYCRWAERKGYKVTLLDYQEGEEAGIK 137 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 S ++LI+G AYG+LK E+GVHRLVRISP+DS+ RRHTSF+S+ V P D IEI I E Sbjct: 138 SVSILIEGDMAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASLDVMPQFSDEIEITIDER 197 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D + T RASGAGGQH+N TDSAVR+TH PTG+VV CQ ERSQ +N+ + NML++KLY+ Sbjct: 198 DLDVVTMRASGAGGQHINKTDSAVRMTHKPTGIVVSCQTERSQIQNRERCMNMLKSKLYQ 257 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++++E + I WG QIRSYV PY MVKD RT E S +V+DGDLD F Sbjct: 258 RMIEEQEAKLAAIRGEQKNIEWGSQIRSYVFCPYTMVKDHRTGYEMGSVQNVMDGDLDGF 317 Query: 347 MKATL 351 + + L Sbjct: 318 IFSYL 322 >gi|189485333|ref|YP_001956274.1| peptide chain release factor 2 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287292|dbj|BAG13813.1| peptide chain release factor 2 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 329 Score = 295 bits (755), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 162/323 (50%), Positives = 218/323 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + +AK M E L N ++ + D + L LA +E+D +L++ D Sbjct: 2 EPDFWNDQNKAKKTMAELDDLKNVCRLWYDMSREVKDLIDLSMLATDENDEKLLKDVEDG 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++++ E+ + + L GE D N+A + +HAGAGGTES DWA +LLRMY+RWAE + FK Sbjct: 62 SKKLEKELSVFEVRTKLGGEHDKNNAIISIHAGAGGTESCDWAQILLRMYSRWAEDKGFK 121 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 TE ++ DG+EAGIK+ T++I+G AYG+L+ E GVHRLVRISP+DSN RRHTSFSS+ V Sbjct: 122 TEVVDSLDGDEAGIKNITMIIRGEYAYGFLQSEIGVHRLVRISPFDSNKRRHTSFSSVDV 181 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P V+DSI+I I + D RIDTYRASGAGGQH+N TDSAVRITH+ T + VQ Q +RSQ K Sbjct: 182 IPEVEDSIDIIIEDKDIRIDTYRASGAGGQHINKTDSAVRITHLATEITVQSQNDRSQIK 241 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A +L+A+LYELE +K+ + K I W QIRSYV PYQ+VKD RT + Sbjct: 242 NRTTAMKLLKARLYELEQEKQRASYEKHYNEKGAIEWSSQIRSYVFMPYQLVKDHRTGYK 301 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 V+DGD+DDF+ A L+ K Sbjct: 302 TLRMDLVMDGDIDDFISAYLSWK 324 >gi|323351855|ref|ZP_08087506.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66] gi|322121912|gb|EFX93644.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66] gi|324993198|gb|EGC25118.1| peptide chain release factor RF2 [Streptococcus sanguinis SK405] gi|324995500|gb|EGC27412.1| peptide chain release factor RF2 [Streptococcus sanguinis SK678] gi|325687821|gb|EGD29841.1| peptide chain release factor RF2 [Streptococcus sanguinis SK72] gi|325689974|gb|EGD31978.1| peptide chain release factor RF2 [Streptococcus sanguinis SK115] gi|325696780|gb|EGD38668.1| peptide chain release factor RF2 [Streptococcus sanguinis SK160] gi|327461467|gb|EGF07798.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1] gi|327469623|gb|EGF15092.1| peptide chain release factor RF2 [Streptococcus sanguinis SK330] gi|327473772|gb|EGF19190.1| peptide chain release factor RF2 [Streptococcus sanguinis SK408] gi|327489322|gb|EGF21115.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1058] gi|332359597|gb|EGJ37415.1| peptide chain release factor RF2 [Streptococcus sanguinis SK49] gi|332361549|gb|EGJ39353.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1056] gi|332362808|gb|EGJ40602.1| peptide chain release factor RF2 [Streptococcus sanguinis SK355] gi|332366326|gb|EGJ44078.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1059] Length = 325 Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L ++ + ++ ILL+ L ED+ + Sbjct: 3 EPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF-LAEDESVQGELEEKL 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K+ Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 62 AELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|324990937|gb|EGC22872.1| peptide chain release factor RF2 [Streptococcus sanguinis SK353] Length = 325 Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L ++ + ++ ILL+ L ED+ + Sbjct: 3 EPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF-LAEDESVQGELEEKL 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K+ Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 62 AELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|256846801|ref|ZP_05552256.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2] gi|256717767|gb|EEU31325.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2] Length = 331 Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 150/322 (46%), Positives = 219/322 (68%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 T + + W + ++ +++ N +S +++ + D +L++ +E + S E Sbjct: 5 TFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDF-VESGEASFENELQ 63 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + LL E D N+A + +H+GAGGTE+ DWA+ML RMY RW + Sbjct: 64 TKHKILKSDIEEFEINLLLDREYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKG 123 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K L+ +G+ G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ Sbjct: 124 YKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASV 183 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VD+++E+EI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ Sbjct: 184 EVVPEVDENVEVEINPTDIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQ 243 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL ELE++K+EE + +++IGWG QIRSYV QPY +VKD RTN Sbjct: 244 LSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTN 303 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + V+DG +DDF+ + L Sbjct: 304 TEIGNVKAVMDGSIDDFINSYL 325 >gi|125717712|ref|YP_001034845.1| peptide chain release factor 2 [Streptococcus sanguinis SK36] gi|125497629|gb|ABN44295.1| Peptide chain release factor 2, putative [Streptococcus sanguinis SK36] Length = 325 Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L ++ + ++ ILL+ L ED+ + Sbjct: 3 EPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF-LAEDELVQGELEEKL 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K+ Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 62 AELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|54026461|ref|YP_120703.1| peptide chain release factor 2 [Nocardia farcinica IFM 10152] gi|76363350|sp|Q5YR52|RF2_NOCFA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54017969|dbj|BAD59339.1| putative peptide chain release factor 2 [Nocardia farcinica IFM 10152] Length = 372 Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 160/355 (45%), Positives = 226/355 (63%), Gaps = 8/355 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + E H + +++ Sbjct: 11 ELDATLKTVESVLDIEELRRRIDELEHQAADPDLWNDQDHAQRVTSELSHAQGELRRVED 70 Query: 62 IQDRLCDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ RL D +L ELA E+ + L+E + +VE + +LLSGE D +A Sbjct: 71 LRRRLEDLPVLYELAEGEEGEARTAALEEADAERAALHSDVEAMEVRTLLSGEYDKREAL 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ DWA ML+RMY RWA++ + E + EEAGIKSAT +K P AY Sbjct: 131 VNIRSGAGGVDAADWAEMLMRMYIRWADRHGYPVEVYDTSYAEEAGIKSATFAVKTPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+ + V PVV+ + IE+ E++ R+D YR+SG Sbjct: 191 GTLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEVPETEIRVDVYRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ +NK A +L+AKL LE +++EE A + Sbjct: 251 GGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKISAMRVLQAKL--LERKRQEERAEM 308 Query: 299 GESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ KT G WG Q+RSYVL PYQMVKDLRTN E +PS VL+GD+D F+++ + Sbjct: 309 -DALKTNEGASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLNGDIDGFIESGI 362 >gi|328945974|gb|EGG40121.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1087] Length = 325 Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 151/320 (47%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L ++ + ++ ILL+ E D S+ E + Sbjct: 3 EPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFMAE--DESVQGELEEK 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 61 LAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|326798108|ref|YP_004315927.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21] gi|326548872|gb|ADZ77257.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21] Length = 361 Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 147/319 (46%), Positives = 211/319 (66%), Gaps = 2/319 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + EA+ +++ + E+ + D ++ + D QE + Sbjct: 39 PDFWDHPKEAEKVLQSIKSKKVWTDSFDELLQAIDDASVMFDFYQSGDASE--QEADELF 96 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 Q VE +F+++LS E D A L++ AGAGGTES DWA ML+RMY W EK +K Sbjct: 97 QEALKRVEELEFKNMLSAEEDQLTAILQITAGAGGTESCDWAAMLMRMYIMWGEKNGYKV 156 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 + +G+ AG+KS TL G AYG+LKGE GVHRLVRISP+DSN++RHTSF+S++VY Sbjct: 157 TEQDFLEGDVAGVKSVTLQFDGNFAYGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVY 216 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P+VDD+IEIE+ +SD DT+R+ GAGGQ+VN ++AVR+ H P+G+V++ Q+ RSQ +N Sbjct: 217 PLVDDTIEIEVKDSDIEWDTFRSGGAGGQNVNKVETAVRLHHKPSGIVIKNQESRSQLQN 276 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 K A +L+++LYE+E++KR E E SK +I WG QIR+YVL PY++VKDLRT E Sbjct: 277 KDNAMRLLKSQLYEIEMRKRMETTAAIEGSKKKIEWGSQIRNYVLHPYKLVKDLRTGHET 336 Query: 333 TSPSDVLDGDLDDFMKATL 351 ++ VLDG+LD+F+K+ L Sbjct: 337 SNTQAVLDGELDEFLKSYL 355 >gi|315223860|ref|ZP_07865708.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287] gi|314946190|gb|EFS98191.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287] Length = 315 Score = 295 bits (754), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 133/255 (52%), Positives = 195/255 (76%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E +F ++LS E D+ A L++ AGAGGTES DWA+MLLRMYT W +K+K + L Sbjct: 52 IEALEFRNMLSDEGDTMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+ AGIK+ T+ I+G A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+ Sbjct: 112 EGDVAGIKTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDT 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEI+I+ +D +T R+SGAGGQ+VN ++AVR+ H PTG++++ + RSQ NK +A Sbjct: 172 IEIDINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQ 231 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +L+++LYE+EL+KR+ + E+ K +I WG QIR+YV+ PY++VKD+RTN E T V Sbjct: 232 LLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSV 291 Query: 339 LDGDLDDFMKATLAI 353 ++G+LD+F+KA L + Sbjct: 292 MNGELDEFLKAYLML 306 >gi|33241929|ref|NP_876870.1| peptide chain release factor 2 [Chlamydophila pneumoniae TW-183] gi|33236439|gb|AAP98527.1| translation releasing factor RF-2 [Chlamydophila pneumoniae TW-183] Length = 253 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 142/247 (57%), Positives = 182/247 (73%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 +LSGEAD N +L ++AGAGGTES DW ML RMY+RWA K ++ E ++ DGE GIK Sbjct: 1 MLSGEADKNSCFLTINAGAGGTESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 T+ G AYG+ K E+GVHRLVRISP+DSN +RHTSF+S+ V+P +DD I+IEI + Sbjct: 61 HVTVKFSGMYAYGYAKAERGVHRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPN 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDT+R+SGAGGQHVN T+SAVRITH+P+GVVV CQ ERSQ +N+ ML+AKLY+ Sbjct: 121 DLRIDTFRSSGAGGQHVNVTESAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQ 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345 LQ+R E ++ K EI WG QIR+YV QPY +VKD+RT E + +LDG+ LD+ Sbjct: 181 QVLQERLEKQSLDRKDKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDE 240 Query: 346 FMKATLA 352 F+KA LA Sbjct: 241 FIKAYLA 247 >gi|213962528|ref|ZP_03390790.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno] gi|213954854|gb|EEB66174.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno] Length = 317 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 133/255 (52%), Positives = 194/255 (76%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E +F ++LS E D+ A L++ AGAGGTES DWA+MLLRMYT W +K+K + L Sbjct: 53 IEALEFRNMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQ 112 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+ AGIK+ T+ I+G A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+ Sbjct: 113 EGDVAGIKTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDT 172 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEIEI+ +D +T R+SGAGGQ+VN ++AVR+ H PTG++++ + RSQ NK +A Sbjct: 173 IEIEINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQ 232 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +L+++LYE+EL+KR+ + E+ K +I WG QIR+YV+ PY++VKD+RTN E T V Sbjct: 233 LLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSV 292 Query: 339 LDGDLDDFMKATLAI 353 ++G+LD+F+KA L + Sbjct: 293 MNGELDEFLKAYLML 307 >gi|150024963|ref|YP_001295789.1| peptide chain release factor 2 [Flavobacterium psychrophilum JIP02/86] gi|149771504|emb|CAL42973.1| Peptide chain release factor 2 (RF-2) [Flavobacterium psychrophilum JIP02/86] Length = 293 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 136/266 (51%), Positives = 196/266 (73%) Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 QE + +E + +++LS E D+ A L++ AGAGGTES DWA ML+RMY WA Sbjct: 20 QELDQQYEATNTHIEGIELKNMLSDEGDALSAVLQITAGAGGTESCDWAEMLMRMYIMWA 79 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + + +K + L G+ AGIK+ TL I+G ++G+LKGE GVHRLVRISP+DSN++RHTS Sbjct: 80 QNQGYKIKELNFQKGDAAGIKTVTLEIEGDYSFGYLKGENGVHRLVRISPFDSNAKRHTS 139 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S++VYP+VDD+IEIEI+ +D I T R+SGAGGQ+VN ++ V++TH PTG+ +QC + Sbjct: 140 FASVYVYPLVDDTIEIEINPADIEIITARSSGAGGQNVNKVETKVQLTHKPTGIQIQCSE 199 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 RSQH N+ +A MLR++LYE+EL+K++E N E+ K +I WG QIR+YV+QPY++VKD Sbjct: 200 TRSQHDNRNRAMQMLRSQLYEIELKKQQEQRNDIEAGKMKIEWGSQIRNYVMQPYKLVKD 259 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 +RT E + V++G++D F+KA L Sbjct: 260 VRTGHETSDVDSVMNGNIDAFLKAYL 285 >gi|256832101|ref|YP_003160828.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603] gi|256685632|gb|ACV08525.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603] Length = 369 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 147/350 (42%), Positives = 222/350 (63%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +++ L+ + P LW + +A+ + N + I+ Sbjct: 11 QLRATLATISAVSDPEALTAKIAELSDQASAPDLWDDPAQAQQVTSALSLAQNELKRIES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q R+ D +L+E+A+E +D L E D IK +++ + +LLSGE D+ +A + + Sbjct: 71 MQQRIDDLEVLVEMAVEGNDADTLHEAEDEYAAIKKDLDQLEVRTLLSGEYDAREAVVTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 131 RAGAGGVDAADFAEMLLRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI +++ R+D +R+SG GGQ Sbjct: 191 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHVEIPDNEIRVDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L LE Q E+ + Sbjct: 251 SVNTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LERQAEEKAKKKELA 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVLQPYQMVKDLRT E + + V DG +DDF++A + Sbjct: 310 GDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTNAVFDGHIDDFIEAGI 359 >gi|313837551|gb|EFS75265.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2] gi|314927570|gb|EFS91401.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1] gi|314972490|gb|EFT16587.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3] gi|328907839|gb|EGG27602.1| peptide chain release factor 2 [Propionibacterium sp. P08] Length = 371 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 153/349 (43%), Positives = 217/349 (62%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLEKQVAAPNLWDDQENAQWVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFATADDDKESLTEATSETVKLREEIDALEVRILLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ +K E L+ EEAGIKSAT ++ P +YG L Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWAERHGYKVEILDTSYAEEAGIKSATFVVHAPFSYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIGAGI 362 >gi|152967725|ref|YP_001363509.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216] gi|226726318|sp|A6WEK6|RF2_KINRD RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151362242|gb|ABS05245.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216] Length = 367 Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 151/342 (44%), Positives = 219/342 (64%), Gaps = 3/342 (0%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D D + L+ LN + P LW + A+ + + + I+++ R+ D +L+E Sbjct: 24 DLDALRKELADLNDEAAAPSLWDDPEHAQTVTSRLSAVQAELDRIEKMGGRIDDLEVLVE 83 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L+ +E D L E L +K ++ + +LLSGE DS +A + + + AGG ++ D+A Sbjct: 84 LSEDEHDADSLAEAETELNEVKEQLAQLEVRTLLSGEYDSREAIVTIRSEAGGVDAADFA 143 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML+RMY RWAE+R +K+E + EEAGIKSAT + P AYG L EQG HRLVRIS Sbjct: 144 EMLMRMYLRWAERRGYKSEVYDTSYAEEAGIKSATFKVAAPYAYGTLSVEQGTHRLVRIS 203 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D+ RR TSF+ + V PVV ++ +++ E++ R+D YR+SG GGQ VNTTDSAVR+TH Sbjct: 204 PFDNQGRRQTSFAGVEVLPVVAETDHVDVPENEVRVDVYRSSGPGGQSVNTTDSAVRLTH 263 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIR 313 +PTG+VV CQ E+SQ +NKA A +L+AKL LE +++ A + + G WG Q+R Sbjct: 264 LPTGIVVTCQNEKSQLQNKAAAMRVLQAKL--LEKARKDRQAELDALKGDDSGSWGNQMR 321 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 SYVL PYQMVKDLRTN E + S + DG++D F++A + +K Sbjct: 322 SYVLHPYQMVKDLRTNYEVGNTSSIFDGEIDSFLEAGIRWRK 363 >gi|115380059|ref|ZP_01467103.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca DW4/3-1] gi|115362934|gb|EAU62125.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca DW4/3-1] Length = 309 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 144/286 (50%), Positives = 199/286 (69%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D L+ELA E +D + QE L ++ ++ + +LSGE D ++ +++++AGA Sbjct: 11 LDDAQTLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRSNCFMDINAGA 70 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGT+S DWA ML+RMYTR+ E+R ++ E ++ GEEAG K+ +L I+G AYG+LK E Sbjct: 71 GGTDSMDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYAYGYLKAEV 130 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D + R GAGGQ VN Sbjct: 131 GVHRLVRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGGQKVNK 190 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T S ++ H+PT +++ CQ ERSQ NK A+ +LRA+LYELEL+KRE + E+ K + Sbjct: 191 TSSTAQLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERDAAEAQKKD 250 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I +G QIRSYVL PY+MVKDLRT +E + VLDGDL+ F+ A L Sbjct: 251 ISFGSQIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 296 >gi|319939454|ref|ZP_08013814.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV] gi|319811440|gb|EFW07735.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV] Length = 325 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 147/320 (45%), Positives = 203/320 (63%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + + A+ +E L +++ D ++ ILL+ E+D E Sbjct: 3 EPDFWDDNVAAQKTSQELNELKQTYDNFQQMTDLFDESEILLDFLAEDDSFQEELEEKLA 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ FK Sbjct: 63 ELETRM-TSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEIE+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q+ Sbjct: 181 MPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A +L+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT E Sbjct: 241 NRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTGYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|255037742|ref|YP_003088363.1| peptide chain release factor 2 [Dyadobacter fermentans DSM 18053] gi|254950498|gb|ACT95198.1| bacterial peptide chain release factor 2 (bRF- 2) [Dyadobacter fermentans DSM 18053] Length = 357 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 156/349 (44%), Positives = 231/349 (66%), Gaps = 3/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ LG D+ N Q+L L +T P W + A+ +M+E + L + +E+ Sbjct: 9 LKARVEALGRYLDYANRKQQLGQLEQQTVQPEFWTDSARAEKVMKEIRGLKFWTNGYEEL 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 RL D+L + E D + +E + +++ +++ +F ++ E D A +E++ Sbjct: 69 A-RLRDDLDTI-WEFYEADEATEEEVDEEGKKLADKLDEIEFRKMMGEEGDELPAVIEIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA+ML+RMY WAEK +K +++ DG+ AG+KS TL I G AYG LK Sbjct: 127 AGAGGTESQDWASMLMRMYIMWAEKNGYKVRQVDLQDGDVAGVKSVTLEIDGEYAYGNLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S++VYP+ DD+IEIE++ +D DTYR+ GAGGQ+ Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFTSVYVYPLADDNIEIEVNMADITWDTYRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H P+G+++ CQQERSQ NK A +L+++LY++EL+KR E+S Sbjct: 247 VNKVETAVRLHHKPSGIIIACQQERSQLMNKEVAIRLLKSRLYQIELEKRNSARAEVEAS 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYVL + VKD RT+ + ++ VL+GD++ F+KA L Sbjct: 307 KRKIEWGSQIRSYVLDD-RRVKDHRTDYQTSNTEAVLNGDINAFIKAYL 354 >gi|254304309|ref|ZP_04971667.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324501|gb|EDK89751.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 308 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 151/298 (50%), Positives = 212/298 (71%), Gaps = 1/298 (0%) Query: 54 NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 N +S +++ + D +L++ +E + S E S+ + +K ++E + LL GE D Sbjct: 6 NIVSRYEKLATEIDDEEVLIDF-VESGETSFENELSEKHKILKSDIEEFEINLLLDGEYD 64 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ G+KS T L++ Sbjct: 65 MNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKAYKVSELDFMEGDSVGVKSVTFLVE 124 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDTY Sbjct: 125 GINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRIDTY 184 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ N+ A ML++KL ELEL+K+E Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELKKKE 244 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E + +++IGWG QIRSYV QPY +VKD RTN E + V+DG +DDF+ + L Sbjct: 245 EEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYL 302 >gi|213965439|ref|ZP_03393634.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46] gi|213951823|gb|EEB63210.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46] Length = 370 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 158/351 (45%), Positives = 215/351 (61%), Gaps = 3/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D R+ L + DP LW + A+ + + I Sbjct: 11 ELDATLTTIEKVVDVDELSDRIRELEAQAADPSLWDDPDHAQQVTSALSQAQAKMKKIDS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE D ++ ++ +E + ++LSG D +A + + Sbjct: 71 LRGRLDDLSVMYELAEEESDSDAVEMADAERAELRAAIESLEVTTMLSGPYDEREAVINI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWA+K K E + EEAGIKSAT ++ G YG L Sbjct: 131 RSGAGGVDAADWAEMLMRMYLRWADKHGHKVEVYDTSYAEEAGIKSATFVVHGEYMYGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ I+I ESD RID YR+SG GGQ Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEETDHIDIPESDLRIDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGE 300 VNTTDSAVR+TH+PTG+VV CQ E+SQH+NKA A +L+AKL E + Q +R E+ +G Sbjct: 251 SVNTTDSAVRLTHVPTGIVVTCQNEKSQHQNKASAMRVLQAKLLEKKRQEERAELDALGA 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRT E +P VLDGDLD F++A + Sbjct: 311 GGNA--SWGNQMRSYVLHPYQMVKDLRTEYEVNNPQSVLDGDLDGFIEAGI 359 >gi|326335638|ref|ZP_08201825.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692404|gb|EGD34356.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 296 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 132/255 (51%), Positives = 195/255 (76%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E +F ++LS E D+ A L++ AGAGGTES DWA+ML+RMY WA ++ F + L Sbjct: 33 IENLEFRNMLSDEGDALSAVLQITAGAGGTESCDWASMLMRMYIMWANRQGFSVKELNYQ 92 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+ AG+K+ TL I G A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+ Sbjct: 93 EGDVAGVKTVTLEIDGEFAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDT 152 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEIEI+ +D +T R+SGAGGQ+VN ++AVR+ H PTG++++ + RSQ NK +A Sbjct: 153 IEIEINPADISFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQ 212 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +L+++LYE+EL+KR+ + E++K +I WG QIR+YV+QPY++VKD+RTN E T+ V Sbjct: 213 LLKSQLYEMELKKRQAKRDEIEANKMKIEWGSQIRNYVMQPYKLVKDVRTNYETTNVDAV 272 Query: 339 LDGDLDDFMKATLAI 353 ++G++DDF+KA L + Sbjct: 273 MNGEIDDFLKAYLML 287 >gi|223932890|ref|ZP_03624886.1| peptide chain release factor 2 [Streptococcus suis 89/1591] gi|330832393|ref|YP_004401218.1| peptide chain release factor 2 [Streptococcus suis ST3] gi|223898471|gb|EEF64836.1| peptide chain release factor 2 [Streptococcus suis 89/1591] gi|329306616|gb|AEB81032.1| peptide chain release factor 2 [Streptococcus suis ST3] Length = 325 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 149/320 (46%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + + A+ +E L N ++ D ++ ILL+ E D S+ E + Sbjct: 3 EPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAE--DESVRDELVEK 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW MLLRMY R+ + F Sbjct: 61 LVELDKTMTAYEMTLLLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFI 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEIEI + + ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q+ Sbjct: 181 MPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A +L+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT E Sbjct: 241 NRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|241888662|ref|ZP_04775969.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379] gi|241864685|gb|EER69060.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379] Length = 372 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 156/336 (46%), Positives = 218/336 (64%), Gaps = 1/336 (0%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 ++ +R++ + + W + A +L+ E + + + E+ D L + ++E Sbjct: 27 EDKTERVAEIENMMLEADFWNDSEAASLLVTESKSIKKELDEFSEMIDYLEHSEEMVEFL 86 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 +EDD I Q+ + + +K VE F L S E D+N A LE+HAGAGGT++ DW+ + Sbjct: 87 KDEDDEEIYQDLLETVVNLKNSVEDFSFRLLFSEEYDNNTAILEIHAGAGGTDATDWSEL 146 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +LRMY R+ K+ K L G+ G+KSAT+ I+G AYG LKGE+GVHR+VRISP+ Sbjct: 147 MLRMYERFFTKQGLKYSYLNYQSGDITGVKSATIKIEGDFAYGLLKGEKGVHRVVRISPF 206 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 D + +RHTSF+SI V P DD I IEI+ D +IDTYRA GAGGQH+NTTDSAVRITH+ Sbjct: 207 DPSGKRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGGQHINTTDSAVRITHL 266 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 PTG+VVQ Q ERSQ KNK A L++KLY+LE++++E+ + +IGWG QIRSY Sbjct: 267 PTGIVVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKEKELAAIRGEQKDIGWGSQIRSY 326 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V PY MVKD RTN E ++ V+DG++ DF+ A L Sbjct: 327 VFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362 >gi|327459899|gb|EGF06239.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1057] Length = 325 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ ++ L ++ + ++ ILL+ L ED+ + Sbjct: 3 EPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDF-LAEDESVQGELEEKL 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K+ Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 62 AELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|62184808|ref|YP_219593.1| peptide chain release factor 2 [Chlamydophila abortus S26/3] gi|81313013|sp|Q5L6U9|RF2_CHLAB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|62147875|emb|CAH63621.1| putative peptide chain release factor 2 [Chlamydophila abortus S26/3] Length = 368 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 166/351 (47%), Positives = 225/351 (64%), Gaps = 9/351 (2%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L G D + Q LS L +T WQ+V A + L I+ +E + R+ Sbjct: 16 LALAGRSLDLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIVSLKRQIAHYEEFKVRV 75 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVH 122 +NL L + D S E ++L++ E+ + + LLSGE D N +L ++ Sbjct: 76 -ENLAFF---LNDGDVSADPELREDLEKEFTICEHILSEWETQRLLSGEVDKNPCFLTIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DW ML RMY RWA + ++K E ++ +G+ AGIK T+ G AYG+ K Sbjct: 132 AGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I +D RIDT+R+SGAGGQH Sbjct: 192 AERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITHIPTG++V CQ+ERSQ +N+ MLRA++Y+ LQ+R E + + Sbjct: 252 VNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLLDRKN 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 K EI WG QIR+YV QPY +VKD+RT E + ++DG+ LDDF+KA LA Sbjct: 312 KKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 362 >gi|319442594|ref|ZP_07991750.1| peptide chain release factor 2 [Corynebacterium variabile DSM 44702] Length = 356 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 156/349 (44%), Positives = 217/349 (62%), Gaps = 15/349 (4%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + D D R+ L + DP LW + A+ + + H+ + + ++ ++ RL D ++ Sbjct: 1 MLDLDELDDRVRELEAQAADPSLWDDPDHAQQVTSQLSHVQSRLKKVRGLRSRLDDLPVM 60 Query: 73 LELALEEDDCSILQETSD------NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 E+A E + L ++ ++E + ++LSGE D +A + + + AG Sbjct: 61 YEMADEAAVEDAAEGAEAKELADAELADLRADIESLEVTTMLSGEYDDREAVVNIRSAAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ DWA ML+RMYTRWAEK K E +I EEAGIKSAT ++ G YG L EQG Sbjct: 121 GVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVHGDYMYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ S ++I E+D R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAEVEVLPVVETSDHVDIDENDVRVDVYRSSGPGGQSVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI----GESS 302 DSAVR+THIPTG+VV CQ E+SQ +NKA A +L AKL LE +++EE A + G+ S Sbjct: 241 DSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKL--LERKRQEEAAEMDALRGDGS 298 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVL PYQMVKDLRTN E PS VLDG +D ++A + Sbjct: 299 NS---WGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGGIDGLLEAGI 344 >gi|297159934|gb|ADI09646.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1] Length = 383 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 165/355 (46%), Positives = 224/355 (63%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + +L + +E+ Sbjct: 26 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKITSRLSYLQGQLRKAEEL 85 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA EDD E L ++ V+ + +LLSGE DS +A + + Sbjct: 86 RSRIDDLEVLFELADAEDDADARAEAVAELDSVRKAVDEMEVRTLLSGEYDSREALVNIR 145 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE + EEAGIKS T ++ P AYG L Sbjct: 146 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEVYDTSYAEEAGIKSTTFAVQIPYAYGTLS 205 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ RID YR+SG GGQ Sbjct: 206 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEKTDHIEIDESELRIDVYRSSGPGGQG 265 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + ++ Sbjct: 266 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKM-DAL 322 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P VLDG+LD F++A + +K Sbjct: 323 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 377 >gi|325694230|gb|EGD36146.1| peptide chain release factor RF2 [Streptococcus sanguinis SK150] Length = 325 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ ++ L ++ + ++ ILL+ L ED+ + Sbjct: 3 EPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDF-LAEDESVQGELEEKL 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K+ Y + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + FK Sbjct: 62 AELEKMMTSY-EMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 181 MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKQVAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|332877580|ref|ZP_08445324.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684429|gb|EGJ57282.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 315 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 132/255 (51%), Positives = 193/255 (75%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E +F ++LS E D+ A L++ AGAGGTES DWA+MLLRMYT W +K+K + L Sbjct: 52 IEALEFRNMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+ AG+K+ T+ I+G A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+ Sbjct: 112 EGDVAGVKTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDT 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEIEI+ +D +T R+SGAGGQ+VN ++AVR+ H PTG++++ + RSQ NK +A Sbjct: 172 IEIEINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQ 231 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +L+++LYE+EL+KR+ + E+ K +I WG QIR+YV+ PY++VKD+RT E T V Sbjct: 232 LLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTGYESTDVDSV 291 Query: 339 LDGDLDDFMKATLAI 353 ++G+LDDF+KA L + Sbjct: 292 MNGELDDFLKAYLML 306 >gi|146319066|ref|YP_001198778.1| peptide chain release factor 2 [Streptococcus suis 05ZYH33] gi|146321272|ref|YP_001200983.1| peptide chain release factor 2 [Streptococcus suis 98HAH33] gi|145689872|gb|ABP90378.1| Protein chain release factor B [Streptococcus suis 05ZYH33] gi|145692078|gb|ABP92583.1| Protein chain release factor B [Streptococcus suis 98HAH33] gi|292558711|gb|ADE31712.1| Peptide chain release factor 2 [Streptococcus suis GZ1] gi|319758505|gb|ADV70447.1| peptide chain release factor 2 [Streptococcus suis JS14] Length = 325 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 149/320 (46%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + + A+ +E L N ++ D ++ ILL+ E D S+ E + Sbjct: 3 EPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAE--DESVRDELVEK 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L + + + LLS D N+A LE+H G+GGTE+QDW MLLRMY R+ + F Sbjct: 61 LVELDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFI 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 121 VETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IEIEI + + ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q+ Sbjct: 181 MPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A +L+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT E Sbjct: 241 NRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 301 VAQVDKVMDGDLDGFIDAYL 320 >gi|329769029|ref|ZP_08260451.1| peptide chain release factor 2 [Gemella sanguinis M325] gi|328839520|gb|EGF89096.1| peptide chain release factor 2 [Gemella sanguinis M325] Length = 372 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 155/332 (46%), Positives = 214/332 (64%), Gaps = 1/332 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QR++ + D W + A L+ E + + + + D L + ++E +E+ Sbjct: 31 QRVAEIENMMLDADFWNDSDNASALVTESKSIKKELDEFSNMLDYLEHSQEMVEFLRDEE 90 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D I + + + +K VE F L S E D+N+A L++HAGAGGT++ DWA ++LRM Sbjct: 91 DKEIYNDLEETVATLKDSVEDFSFRLLFSEEYDNNNAILDIHAGAGGTDATDWAEIMLRM 150 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R+ K+ K L G+ G+KSAT+ ++G AYG LKGE+GVHR++RISP+D + Sbjct: 151 YERFFSKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLLKGEKGVHRVIRISPFDPSG 210 Query: 201 RRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 +RHTSF+SI V P DD I IEI+ D +IDTYRA GAGGQH+NTTDSAVRITH+PTG+ Sbjct: 211 KRHTSFASIDVMPEFSDDEINIEINNDDLKIDTYRAQGAGGQHINTTDSAVRITHLPTGI 270 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VVQ Q ERSQ KNK A L++KLY+LEL+++E+ + +IGWG QIRSYV P Sbjct: 271 VVQSQAERSQIKNKDTAMKNLKSKLYQLELEEKEKELASIRGEQKDIGWGSQIRSYVFTP 330 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y MVKD RTN E ++ V+DGD+ DF+ A L Sbjct: 331 YTMVKDHRTNYEVSTVDKVMDGDIIDFIDAYL 362 >gi|163846312|ref|YP_001634356.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl] gi|222524073|ref|YP_002568544.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl] gi|163667601|gb|ABY33967.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl] gi|222447952|gb|ACM52218.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl] Length = 313 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 146/306 (47%), Positives = 204/306 (66%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ L ++ +++ R+ L+ELA E D S+ + + +Q I+ EV ++ E Sbjct: 1 MQRLTRLKEEVTAWNDLERRIASAAELIELAELEGDESLTADLAAEVQAIQREVAQRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSG D DA+L V AG GGT++QDWA MLLRMYTRWAE+R + +++ +GEEAGI Sbjct: 61 ILLSGPYDDRDAFLSVQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDMSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I+GP AYG+ + E GVHRL+R+SP+++ R TSF+ + V P VDD+ E+EI Sbjct: 121 KSATIEIRGPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKP 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +N+ A +LRA+L Sbjct: 181 EDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRELAMRVLRARLL 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ++ E E +G Q+R+Y L P +VKD RT+ E ++ VLDG++D Sbjct: 241 ERELQRQAEERARLRGEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDP 300 Query: 346 FMKATL 351 F++A L Sbjct: 301 FIEAFL 306 >gi|119358306|ref|YP_912950.1| peptide chain release factor 2 [Chlorobium phaeobacteroides DSM 266] gi|119355655|gb|ABL66526.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium phaeobacteroides DSM 266] Length = 363 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 150/344 (43%), Positives = 216/344 (62%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG+FD D +++ L T DP W + EA ++E + +++ Sbjct: 17 SYGGIFDVDERKEKIDDLEKITADPGFWNDQQEANRTLKELSEHKSWTGAFDKLEAAAKT 76 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + L +A E D S E ++ I+ + +F ++LSG+ D +A + +HAGAGGT Sbjct: 77 SGEELTIADELQDESFADELIASIAAIESGIAAIEFRNMLSGKDDPGNAIITIHAGAGGT 136 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK E GVH Sbjct: 137 EAQDWAEMLYRMYMRWAERKGFKVFTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGVH 196 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR+SP+DSN+RRHTSF+S++ YP +EI++ + D + T+R+ G GGQ+VN ++ Sbjct: 197 RLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVET 256 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRI HIP+G+VV CQQERSQ +N+ +A ML A+LY+ + ++ + E K +I W Sbjct: 257 AVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREIEGKKKKIEW 316 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL + +KD RTN E+ VLDGDLD FM+ L+ Sbjct: 317 GSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDTFMEKYLS 359 >gi|158336840|ref|YP_001518014.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017] gi|158307081|gb|ABW28698.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017] Length = 304 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 145/297 (48%), Positives = 209/297 (70%), Gaps = 2/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 ++ +++ Q L D L+EL E+D +LQE + NL+++ +++ + + LLSG D Sbjct: 1 MTQLQDWQGTLDDAEALVELLQLEEDAGLLQEAAGNLRQLNQQLDQWELQQLLSGPYDKV 60 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 A L ++ GAGGT++QDWA MLLRMYTRW+E++ +K E+ +G+EAGIKSATL ++G Sbjct: 61 GAVLTINTGAGGTDAQDWAEMLLRMYTRWSERQGYKVHLAELSEGDEAGIKSATLEVEGR 120 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG+LK E+G HRLVRISP+++N +R TSF+ I V P +D +E++I ++D I T R+ Sbjct: 121 YAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPQLDHEVELDIPDTDLEITTSRS 180 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREE 294 G GGQ+VN ++AVRI H+PTG+ V+C QERSQ +NK +A +L+AKL + + QK +E Sbjct: 181 GGKGGQNVNKVETAVRIVHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQKAKE 240 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IA+I E WG QIR+YV PYQMVKDLRTN E T+ V+DG LD+F++A L Sbjct: 241 IADI-RGDAVEAAWGNQIRNYVFHPYQMVKDLRTNQETTAIESVMDGALDNFIEAYL 296 >gi|86132182|ref|ZP_01050777.1| peptide chain release factor 2 [Dokdonia donghaensis MED134] gi|85817101|gb|EAQ38284.1| peptide chain release factor 2 [Dokdonia donghaensis MED134] Length = 316 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 138/255 (54%), Positives = 191/255 (74%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E +F ++LS E D L++ AGAGGTES DWA+ML+RMY +AEK+ +K + L Sbjct: 52 IEDIEFRNMLSEEGDELSCVLQITAGAGGTESCDWASMLMRMYLMYAEKQGWKVKELNFQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+ AGIK+ +L I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDS Sbjct: 112 EGDVAGIKTVSLEIEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDS 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEIE++ +D I T R+SGAGGQ+VN ++ V++TH PTG+ + C RSQH N+A+A Sbjct: 172 IEIELNPADYDIVTARSSGAGGQNVNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQ 231 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 MLR++LYELEL+K+ E N E+ K I WG QIR+YVL PY++VKD+RT +E + V Sbjct: 232 MLRSQLYELELRKQMEARNAIEADKKAIEWGSQIRNYVLHPYKLVKDVRTAVETGNTDAV 291 Query: 339 LDGDLDDFMKATLAI 353 LDG++D F+K L + Sbjct: 292 LDGNIDLFLKGYLMM 306 >gi|19704676|ref|NP_604238.1| peptide chain release factor 2 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328111|ref|ZP_06870644.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714986|gb|AAL95537.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154782|gb|EFG95566.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 308 Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 150/298 (50%), Positives = 211/298 (70%), Gaps = 1/298 (0%) Query: 54 NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 N +S +++ + D +L++ +E + S E S+ + +K ++E + LL GE D Sbjct: 6 NIVSRYEKLATEIDDEEVLIDF-VESGETSFESELSEKHKNLKTDIEEFEINLLLDGEYD 64 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ G+KS T L++ Sbjct: 65 MNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTFLVE 124 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G NAYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ D RIDTY Sbjct: 125 GINAYGYLKSEKGIHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPVDIRIDTY 184 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ N+ A ML++KL ELEL+K+E Sbjct: 185 RASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELKKKE 244 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E + +++IGWG QIRSYV QPY +VKD RTN E + V+DGD+D F+ + L Sbjct: 245 EEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGDIDGFINSYL 302 >gi|169832218|ref|YP_001718200.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator MP104C] gi|169639062|gb|ACA60568.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator MP104C] Length = 330 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 158/324 (48%), Positives = 208/324 (64%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P WQ A+ + R L + ++ D +LLEL E +D +E Sbjct: 2 ETPDFWQQQERAQEVTRRLAGLRQQVEVFDTLRRDFEDAAVLLELGEEIEDPDTAREVER 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 +L + V + E LLSG D +A L +HAGAGG E+QDW ML RMY RWAEKR + Sbjct: 62 SLAELGRRVAALELELLLSGPYDEANAILSLHAGAGGLEAQDWVEMLFRMYLRWAEKRGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+I +EAG+K+ T L+ GP AYG+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 122 AVEVLDILPDDEAGLKNVTFLVSGPMAYGYLRAEKGVHRLVRISPFDAGGRRHTSFASLD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P V ++ I+I+ D RIDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ Sbjct: 182 VLPEVAENTAIDINPEDLRIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVSCQNERSQI 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ A +L+A+L +LEL++REE + +I WG QIRSYV PY MVKD RT Sbjct: 242 ANRNAAMKLLKARLLDLELRRREEEIAALRGEQPDIAWGSQIRSYVFHPYSMVKDHRTKF 301 Query: 331 EKTSPSDVLDGDLDDFMKATLAIK 354 EK + V+DG++D+F++A L K Sbjct: 302 EKGNVDAVMDGEIDEFIQAYLVWK 325 >gi|163788169|ref|ZP_02182615.1| peptide chain release factor RF-2 [Flavobacteriales bacterium ALC-1] gi|159876489|gb|EDP70547.1| peptide chain release factor RF-2 [Flavobacteriales bacterium ALC-1] Length = 315 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 137/275 (49%), Positives = 202/275 (73%) Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D + ++ + ++ +E +F+++LS E DS A L++ AGAGGTES DWA+ML+ Sbjct: 32 KEDEAPMENVENRFEKAVNAIEKLEFKNMLSEEGDSLSAVLQITAGAGGTESCDWASMLM 91 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY +AEK FK + L +G+ AGIK+ TL I+G A+GWLKGE GVHRLVRISP+DS Sbjct: 92 RMYLMYAEKSGFKVKELNHQEGDVAGIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDS 151 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N++RHTSF+S++VYP+VDDSIEIEI+ +D I T R+SGAGGQ+VN ++ V++ H P+G Sbjct: 152 NAKRHTSFASVYVYPLVDDSIEIEINPADIEITTARSSGAGGQNVNKVETKVQLHHKPSG 211 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 + +QC + RSQH N+ +A ML+++LYE+ELQK+ + E+ K +I WG QIR+YV+ Sbjct: 212 IQIQCSETRSQHDNRTRAMQMLKSQLYEIELQKQMAQRDDIEAGKMKIEWGSQIRNYVMH 271 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 PY++VKD+R+ E + V+DGD++ F+KA L + Sbjct: 272 PYKLVKDVRSAHETGNVDAVMDGDIEPFLKAYLMM 306 >gi|311086167|gb|ADP66249.1| peptide chain release factor 2 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 248 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 133/247 (53%), Positives = 185/247 (74%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S + D D Y+++ +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++ GE GIK Sbjct: 1 MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 S+T+ + G A+GW + E G+HRL+R SP+DS RRHTSFSSI++YP +++ I+I I+ S Sbjct: 61 SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ RSQHKNK QA +++KLYE Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++++K++E E +K++I WG QIRSY+L + +KDLRT +EK VLDGDLDDF Sbjct: 181 IQMRKKQEEKQKIEQNKSDITWGNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDF 239 Query: 347 MKATLAI 353 ++ +L + Sbjct: 240 IEQSLIM 246 >gi|221217380|ref|ZP_03588851.1| peptide chain release factor 2 [Borrelia burgdorferi 72a] gi|221192658|gb|EEE18874.1| peptide chain release factor 2 [Borrelia burgdorferi 72a] Length = 348 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 158/345 (45%), Positives = 224/345 (64%), Gaps = 8/345 (2%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ D Sbjct: 4 TFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAG 126 L E+A E D + L+ ++ LE +YK S E D+N+A+L +H+GAG Sbjct: 64 LSDLFEIAENEKDTNGLE-----IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAG 118 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G Sbjct: 119 GTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVG 177 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 178 IHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKT 237 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 238 SSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEI 297 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 298 SWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 342 >gi|256390605|ref|YP_003112169.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928] gi|256356831|gb|ACU70328.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928] Length = 368 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 156/354 (44%), Positives = 218/354 (61%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D +++ L + P LW + +A+ + + L ++ + Sbjct: 12 LRTTMASIEAVLDLGKLRAQIADLEEQASAPDLWDDQAKAQAVTSKLSGLQAELNRFSTL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 RL D +L EL E D L E L + V + +LLSGE D+ +A + + Sbjct: 72 NRRLEDIEVLFELGQSEGDEDALAEVQGELVDVSKAVGELEVRTLLSGEYDAREALVTLR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A MLLRMYTRWAE+ ++ E + EEAGIKSATL +K P AYG L Sbjct: 132 AEAGGVDAADFAEMLLRMYTRWAERHNYQYEVYDTSYAEEAGIKSATLTVKAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S ++I E + R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQSDHVDIPEDELRVDVYRSSGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+P+G+VV CQ ERSQ +N+A A +L+AKL L+ ++ EE A + Sbjct: 252 VNTTDSAVRITHLPSGIVVSCQNERSQIQNRASAMAVLQAKL--LQRRREEEQAKMDALK 309 Query: 303 KTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G WG Q+RSYVL PYQ+VKDLRTN E + + VLDGD+D+F++A + +K Sbjct: 310 DDSSGSWGNQMRSYVLHPYQLVKDLRTNYETGNTTAVLDGDIDEFIEAGIRWRK 363 >gi|284046044|ref|YP_003396384.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684] gi|283950265|gb|ADB53009.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684] Length = 372 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 166/351 (47%), Positives = 219/351 (62%), Gaps = 12/351 (3%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKML----MRERQHLDNAISFIKE 61 QL L D ++ L + P W + +A R + LD + + + Sbjct: 23 QLTLLADYVDPKALEAHVAELEQEMGAPGFWDSQEKAAKTSAEHARASRKLDTYRTLVSD 82 Query: 62 IQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++D L LA + ++D + E ++ + + +E + E L SG D DA + Sbjct: 83 VED-------LEPLAEMAQEDPELEAELAEQIASAERRLEQLEEERLFSGRYDGGDALVT 135 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 V+AGAGGT++QDWA M+LRM RWAEKR F E LE+ GEEAGIKSAT +KG NAYG Sbjct: 136 VNAGAGGTDAQDWAEMVLRMEMRWAEKRGFDVELLEVSAGEEAGIKSATFRVKGENAYGL 195 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 E+GVHRLVR+SP+DS +RR TSF+ + V PVV+D+ E+EI + D ++DTYRASGAGG Sbjct: 196 YGAEKGVHRLVRLSPFDSANRRQTSFAGVEVAPVVEDAAEVEIDDDDLQVDTYRASGAGG 255 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN TDSAVRITH P+G+VVQCQ ERSQ N+A A MLR+KL ELE ++R+E + Sbjct: 256 QHVNKTDSAVRITHRPSGIVVQCQNERSQSSNRATAMAMLRSKLVELEERRRQEEIAKEK 315 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ +G QIRSYVL PY MVKD RT E VLDGDLD F++A L Sbjct: 316 GEAQDVNFGSQIRSYVLHPYSMVKDHRTEFEIGDTGRVLDGDLDGFVRAYL 366 >gi|15610242|ref|NP_217621.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Rv] gi|31794284|ref|NP_856777.1| peptide chain release factor 2 [Mycobacterium bovis AF2122/97] gi|121638990|ref|YP_979214.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662959|ref|YP_001284482.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra] gi|148824297|ref|YP_001289051.1| peptide chain release factor 2 [Mycobacterium tuberculosis F11] gi|167969713|ref|ZP_02551990.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra] gi|215405101|ref|ZP_03417282.1| peptide chain release factor 2 [Mycobacterium tuberculosis 02_1987] gi|215412969|ref|ZP_03421670.1| peptide chain release factor 2 [Mycobacterium tuberculosis 94_M4241A] gi|215428558|ref|ZP_03426477.1| peptide chain release factor 2 [Mycobacterium tuberculosis T92] gi|215432061|ref|ZP_03429980.1| peptide chain release factor 2 [Mycobacterium tuberculosis EAS054] gi|215447387|ref|ZP_03434139.1| peptide chain release factor 2 [Mycobacterium tuberculosis T85] gi|218754875|ref|ZP_03533671.1| peptide chain release factor 2 [Mycobacterium tuberculosis GM 1503] gi|224991482|ref|YP_002646171.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo 172] gi|253797794|ref|YP_003030795.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN 1435] gi|254233729|ref|ZP_04927054.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C] gi|254365733|ref|ZP_04981778.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis str. Haarlem] gi|254552185|ref|ZP_05142632.1| peptide chain release factor 2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188141|ref|ZP_05765615.1| peptide chain release factor 2 [Mycobacterium tuberculosis CPHL_A] gi|260202247|ref|ZP_05769738.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46] gi|289444669|ref|ZP_06434413.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46] gi|289448784|ref|ZP_06438528.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis CPHL_A] gi|289553103|ref|ZP_06442313.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN 605] gi|289571312|ref|ZP_06451539.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T17] gi|289575817|ref|ZP_06456044.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis K85] gi|289746915|ref|ZP_06506293.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis 02_1987] gi|289751781|ref|ZP_06511159.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T92] gi|289755223|ref|ZP_06514601.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis EAS054] gi|289759231|ref|ZP_06518609.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T85] gi|289763284|ref|ZP_06522662.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM 1503] gi|294993388|ref|ZP_06799079.1| peptide chain release factor 2 [Mycobacterium tuberculosis 210] gi|297635740|ref|ZP_06953520.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN 4207] gi|297732739|ref|ZP_06961857.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN R506] gi|298526578|ref|ZP_07013987.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis 94_M4241A] gi|306777415|ref|ZP_07415752.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu001] gi|313660071|ref|ZP_07816951.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN V2475] gi|2076680|emb|CAB08395.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium tuberculosis H37Rv] gi|31619879|emb|CAD96819.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium bovis AF2122/97] gi|121494638|emb|CAL73119.1| Probable peptide chain release factor 2 prfB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599258|gb|EAY58362.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C] gi|134151246|gb|EBA43291.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis str. Haarlem] gi|148507111|gb|ABQ74920.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra] gi|148722824|gb|ABR07449.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis F11] gi|224774597|dbj|BAH27403.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo 172] gi|253319297|gb|ACT23900.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN 1435] gi|289417588|gb|EFD14828.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46] gi|289421742|gb|EFD18943.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis CPHL_A] gi|289437735|gb|EFD20228.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN 605] gi|289540248|gb|EFD44826.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis K85] gi|289545066|gb|EFD48714.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T17] gi|289687443|gb|EFD54931.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis 02_1987] gi|289692368|gb|EFD59797.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T92] gi|289695810|gb|EFD63239.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis EAS054] gi|289710790|gb|EFD74806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM 1503] gi|289714795|gb|EFD78807.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T85] gi|298496372|gb|EFI31666.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis 94_M4241A] gi|308214303|gb|EFO73702.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu001] gi|326902672|gb|EGE49605.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis W-148] gi|328457573|gb|AEB02996.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN 4207] Length = 378 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 162/350 (46%), Positives = 225/350 (64%), Gaps = 8/350 (2%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + + D + R+ L + DPHLW + A+ + E H + ++E++ RL Sbjct: 23 LTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRL 82 Query: 67 CDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +L ELA EE + ++ L+ ++ ++E + +LLSGE D +A + + + Sbjct: 83 DDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRS 142 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG L Sbjct: 143 GAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSV 202 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GGQ V Sbjct: 203 EQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSV 262 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + ++ K Sbjct: 263 NTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKL--LERKRLEERAEL-DALK 319 Query: 304 TEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGDLD F++A + Sbjct: 320 ADGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGI 369 >gi|219559147|ref|ZP_03538223.1| peptide chain release factor 2 [Mycobacterium tuberculosis T17] gi|260206441|ref|ZP_05773932.1| peptide chain release factor 2 [Mycobacterium tuberculosis K85] gi|308369955|ref|ZP_07419655.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu002] gi|308371233|ref|ZP_07424282.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu003] gi|308372424|ref|ZP_07428636.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu004] gi|308373628|ref|ZP_07433110.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu005] gi|308374772|ref|ZP_07437352.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu006] gi|308375989|ref|ZP_07668163.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu007] gi|308377222|ref|ZP_07668462.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu008] gi|308378190|ref|ZP_07481848.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu009] gi|308379411|ref|ZP_07486192.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu010] gi|308380571|ref|ZP_07490411.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu011] gi|308406052|ref|ZP_07494953.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu012] gi|54039054|sp|P66027|RF2_MYCBO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54041597|sp|P66026|RF2_MYCTU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|308325955|gb|EFP14806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu002] gi|308329480|gb|EFP18331.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu003] gi|308333326|gb|EFP22177.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu004] gi|308336980|gb|EFP25831.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu005] gi|308340794|gb|EFP29645.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu006] gi|308344662|gb|EFP33513.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu007] gi|308348612|gb|EFP37463.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu008] gi|308353337|gb|EFP42188.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu009] gi|308357171|gb|EFP46022.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu010] gi|308361122|gb|EFP49973.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu011] gi|308364657|gb|EFP53508.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu012] gi|323718336|gb|EGB27514.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis CDC1551A] Length = 371 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 162/350 (46%), Positives = 225/350 (64%), Gaps = 8/350 (2%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + + D + R+ L + DPHLW + A+ + E H + ++E++ RL Sbjct: 16 LTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRL 75 Query: 67 CDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +L ELA EE + ++ L+ ++ ++E + +LLSGE D +A + + + Sbjct: 76 DDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRS 135 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG L Sbjct: 136 GAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSV 195 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GGQ V Sbjct: 196 EQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSV 255 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + ++ K Sbjct: 256 NTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKL--LERKRLEERAEL-DALK 312 Query: 304 TEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGDLD F++A + Sbjct: 313 ADGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGI 362 >gi|311086739|gb|ADP66820.1| peptide chain release factor 2 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 248 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 133/247 (53%), Positives = 185/247 (74%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S + D D Y+++ +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++ GE GIK Sbjct: 1 MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 S+T+ + G A+GW + E G+HRL+R SP+DS RRHTSFSSI++YP +++ I+I I+ S Sbjct: 61 SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ RSQHKNK QA +++KLYE Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++++K++E E +K++I WG QIRSY+L + +KDLRT +EK VLDGDLDDF Sbjct: 181 IQIRKKQEEKQKIEQNKSDITWGNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDF 239 Query: 347 MKATLAI 353 ++ +L + Sbjct: 240 IEQSLIM 246 >gi|319760398|ref|YP_004124336.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str. BVAF] gi|318039112|gb|ADV33662.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str. BVAF] Length = 265 Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 145/246 (58%), Positives = 182/246 (73%), Gaps = 4/246 (1%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSAT 169 E D+ + Y+++ +G+GG E+QDWANMLLRMY +W + +K F + GE GIKSAT Sbjct: 18 EHDNCNCYVDIQSGSGGIEAQDWANMLLRMYLKWLDSKKGFYVKKTTETSGEFLGIKSAT 77 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + I GP AYGWLK E GVHRLVR SP+DS RRHTSF+SI+VYP +DD+I I I D R Sbjct: 78 IKIIGPYAYGWLKTESGVHRLVRKSPFDSGGRRHTSFASIFVYPELDDNITINIRPEDLR 137 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +D YRASGAGGQHVN T+SAVR+THIPT VV QCQ +RSQHKNK QA L+AKLY LEL Sbjct: 138 VDVYRASGAGGQHVNRTESAVRVTHIPTNVVTQCQSDRSQHKNKNQAIKQLKAKLYNLEL 197 Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 QK++ I E+ K +I WG QIRSY+L + +KDLRT +EK + VL+GDLDDF+ Sbjct: 198 QKKQYEKKIRENKKLDITWGSQIRSYILDDSR-IKDLRTGLEKRNVKAVLNGDLDDFV-- 254 Query: 350 TLAIKK 355 T++IK+ Sbjct: 255 TMSIKQ 260 >gi|194333053|ref|YP_002014913.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271] gi|194310871|gb|ACF45266.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271] Length = 381 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 152/346 (43%), Positives = 222/346 (64%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 LN GG+FD D ++++ L T +P W + EA +++E ++I + Sbjct: 34 LNSYGGIFDIDERLKKIEELEQITAEPDFWNDQKEAHRIVKEINEHKTWTDDFQKIAADV 93 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +E+A E +D S+ E + + I+ E+ + +++LSG+ D +A L ++AGAG Sbjct: 94 ASRQEEVEIAEELEDESLGSEIAGGIDSIEKEITALESKNMLSGKDDPGNALLTINAGAG 153 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML RMY RWAE++ +K + +GE AGIK+ATL I GP AYG+LK E G Sbjct: 154 GTEAQDWAQMLYRMYMRWAERKGYKVFMDDYQEGEGAGIKTATLEIVGPYAYGYLKAENG 213 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+DSN+RRHTSF+S++ YP EI+I + D + T+R+ G GGQ+VN Sbjct: 214 VHRLVRVSPFDSNARRHTSFASVYTYPEAPPDAEIDIRKEDLELSTFRSGGKGGQNVNKV 273 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRI HIP+G+VV CQQERSQ +N+ +A ML A+LY+ + ++ E E K +I Sbjct: 274 ETAVRIKHIPSGIVVSCQQERSQFQNRERAIKMLMAQLYKKQREEEEARKQAVEGQKMKI 333 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYV+ + +KD RTN E+ VLDGD+DDF++ L+ Sbjct: 334 EWGSQIRSYVMDD-RRIKDHRTNHERHDIEAVLDGDIDDFIEKYLS 378 >gi|312868547|ref|ZP_07728744.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3] gi|311095918|gb|EFQ54165.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3] Length = 332 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 158/322 (49%), Positives = 211/322 (65%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A+ L+ + L ++D+L D LEL E D + +E + + Sbjct: 4 PDFWNDNERAQKLINDNNDLKAKRDTYVALRDQLADLETNLELLELEPDPELEKEFATSF 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + ++ + LLS + DS +A LE+H GAGGTE+QDW MLLRMY RWAE+ Sbjct: 64 AQTEEALQQYRLNQLLSEKYDSKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHGLTV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E GE AGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 124 ETANYEPGEVAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASVDVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V Q ERSQ N Sbjct: 184 PELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQLLN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD R+ E Sbjct: 244 RQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSGHET 303 Query: 333 TSPSDVLDGDLDDFMKATLAIK 354 + V+DGDLD F+ A L K Sbjct: 304 HNGQAVMDGDLDPFINAYLQWK 325 >gi|307155327|ref|YP_003890711.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822] gi|306985555|gb|ADN17436.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822] Length = 370 Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 157/359 (43%), Positives = 224/359 (62%), Gaps = 10/359 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTED-------PHLWQNVIEAKMLMRERQHLDN 54 +L R++ +G L L K +D P W + A+ ++E L + Sbjct: 5 ELKREIELIGSRLGKTQDYLDLPTLGAKIKDLEQVAAQPEFWDSPDMAQTTLQELNELKS 64 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 A+ ++ Q +L D ++EL E+D S+L+E NL+++ E+E + + LLSG D+ Sbjct: 65 ALELYQQWQTQLEDAKAIVELLELEEDTSLLEEAQTNLEQLNHELERWELQQLLSGLYDA 124 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 A L ++AGAGGT++QDWA MLLRMYTRW EK+ +K EI +G+EAG+KSATL I+G Sbjct: 125 KGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVHLAEISEGDEAGLKSATLEIEG 184 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEISESDCRIDTY 233 AYG+LKGE+G HRLVRISP+++N +R TSF+ + V P + +++ +EI E D I T Sbjct: 185 RYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPNLGVEAVNVEIPEKDLEITTS 244 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK-AQAWNMLRAKLYELELQKR 292 R+ G GGQ+VN ++AVR+ HIPTG+ V+C QERSQ +NK + L L Q+ Sbjct: 245 RSGGKGGQNVNKVETAVRVVHIPTGLAVRCTQERSQLQNKEKALALLKAKLLVILTEQRA 304 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +EIA I E WG QIR+YV PYQMVKDLRTN+E + V+DGDL+ F++A L Sbjct: 305 KEIAQI-RGDMVEAAWGNQIRNYVFHPYQMVKDLRTNVETSDVGAVMDGDLNGFIEAYL 362 >gi|182438348|ref|YP_001826067.1| peptide chain release factor 2 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778999|ref|ZP_08238264.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1] gi|238688991|sp|B1VV08|RF2_STRGG RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|178466864|dbj|BAG21384.1| putative peptide chain release factor 2 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659332|gb|EGE44178.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1] Length = 368 Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 158/355 (44%), Positives = 223/355 (62%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D E L+ ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAADEGDADAQAEAEAELESVRKALDEMEVRTLLSGEYDAREALVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMN-AL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364 >gi|326330854|ref|ZP_08197155.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1] gi|325951384|gb|EGD43423.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1] Length = 372 Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 157/351 (44%), Positives = 217/351 (61%), Gaps = 3/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + +G + D D + ++ L + P LW + A + L ++ E Sbjct: 12 QLQATMQTIGQVLDLDAMRKEIADLGEQVAAPDLWDDQDNATRVTGRLSLLQGELNKFTE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D +++E+A EE D L E+ L R+K VE + +LLSGE DS +A + + Sbjct: 72 LSSRIEDLELMVEMAQEEGDADTLAESEAELGRVKKAVESLEIRTLLSGEYDSREALVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A ML+RMY RWAE+ K+ E + EEAG+KSAT I P AYG L Sbjct: 132 RSGAGGVDAADFAEMLMRMYVRWAERNKYPVEVFDTSYAEEAGLKSATFAIHAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V PV++ + EIEI E+D ++D YR+SG GGQ Sbjct: 192 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIKVDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300 VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A M+ K L L+K EE A + E Sbjct: 252 SVNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKAAA--MIVLKAKLLALKKAEEEAQLKEL 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+R+YVL PYQ+VKDLRT E +P V DGD+D F++A + Sbjct: 310 KGDVAASWGDQMRNYVLNPYQIVKDLRTTYEVGNPQAVFDGDIDGFLEAGI 360 >gi|290890028|ref|ZP_06553113.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429] gi|290480375|gb|EFD89014.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429] Length = 372 Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 161/350 (46%), Positives = 213/350 (60%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q++ D D ++ K P W + A+ ++ E L N + Sbjct: 13 MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + EL EEDD + E ++++ + ++E LL+ + DSN+A LE+H Sbjct: 73 QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GGTES DWA+ L RMYTRWA+ FK E + G+ AGI SATL I G NAYG+L+ Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241 E+GVHR VRISP+DS RRHTSF SI V P +DD IEIEI D ++D YR+ GAGGQ Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN +AVR+THIPTG+VV Q ER+Q+ N+ A ML+AKLYE E QKREE Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K ++ WG QIRSYV QPY+MVKDLR+ E V+DG+LD F+ A L Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYL 362 >gi|116490620|ref|YP_810164.1| peptide chain release factor 2 [Oenococcus oeni PSU-1] gi|122277196|sp|Q04GC3|RF2_OENOB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116091345|gb|ABJ56499.1| bacterial peptide chain release factor 2 (bRF-2) [Oenococcus oeni PSU-1] Length = 372 Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 161/350 (46%), Positives = 213/350 (60%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q++ D D ++ K P W + A+ ++ E L N + Sbjct: 13 MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + EL EEDD + E ++++ + ++E LL+ + DSN+A LE+H Sbjct: 73 QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GGTES DWA+ L RMYTRWA+ FK E + G+ AGI SATL I G NAYG+L+ Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241 E+GVHR VRISP+DS RRHTSF SI V P +DD IEIEI D ++D YR+ GAGGQ Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN +AVR+THIPTG+VV Q ER+Q+ N+ A ML+AKLYE E QKREE Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEQEEQKREEEHAKLSG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K ++ WG QIRSYV QPY+MVKDLR+ E V+DG+LD F+ A L Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYL 362 >gi|257069176|ref|YP_003155431.1| peptide chain release factor 2 [Brachybacterium faecium DSM 4810] gi|256559994|gb|ACU85841.1| bacterial peptide chain release factor 2 (bRF-2) [Brachybacterium faecium DSM 4810] Length = 371 Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 148/351 (42%), Positives = 222/351 (63%), Gaps = 3/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L+ + + D D +++ L + LW +V A+ + H + I E Sbjct: 12 QLRSTLSSIEQVTDIDALDAKIADLEKQASAQDLWDDVDNAQKVSSALSHAQSERRRISE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D ++++LA EEDD L+E + L I ++ + +LLSGE D DA + + Sbjct: 72 LDSRIEDLEVMVQLAAEEDDADTLEEAENELVSIHKTLDELEVRTLLSGEYDERDAVITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A ML+RMY RWAE+ + T+ ++ EEAG+KS T + P AYG L Sbjct: 132 RAGAGGVDAADFAEMLMRMYLRWAERHGYATKVMDTSHAEEAGLKSVTFEVSAPFAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI E+D ++D +R+SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDSIEIPENDLKVDVFRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300 VNTTDSAVR+TH+PTG VV Q E+SQ +N+A A +++++L L L+K EE A E Sbjct: 252 SVNTTDSAVRMTHLPTGTVVSMQDEKSQIQNRAAALRVMQSRL--LLLKKAEEAAERKEL 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + WG Q+RSYVL PYQMVKDLRT+ ++ +PS V DG++D+F+ A + Sbjct: 310 AGDVKASWGDQMRSYVLNPYQMVKDLRTDYQEGNPSSVFDGEIDEFIDAGI 360 >gi|160914511|ref|ZP_02076726.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991] gi|158433669|gb|EDP11958.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991] Length = 346 Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 155/342 (45%), Positives = 219/342 (64%), Gaps = 8/342 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD ++ L +T + W + A+ L+++ L + + +++ L L Sbjct: 4 FDLAEKKHKIEELTARTMEESFWSDPQHAQTLIQQLNGLKDVVESYEQLDHALAGMEETL 63 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQ 131 L ++ D I + ++ ++E ++QFE LLS E D ++A LE+H GAGGTES Sbjct: 64 TLLKDDFDTEIFELL--EMEYHEMEERFEQFELKMLLSHEYDHSNAILELHPGAGGTESC 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY+RWAEK+ +K L+ G+EAGIKS T L++G AYG+LK E+GVHRLV Sbjct: 122 DWADMLYRMYSRWAEKKGYKVSVLDYLAGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DS RRHTSF+S+ V P +D IEIEI D ++T RASGAGGQH+N TDSA+R Sbjct: 182 RISPFDSGGRRHTSFASLDVMPQFNDEIEIEIRPEDLIVETKRASGAGGQHINKTDSAIR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWG 309 + H PTG+V CQ RSQH+N+ +A +L++++Y+ ++++E +IA I GE E WG Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRILKSRIYQKMIEEQEAKIAEIKGEQKANE--WG 299 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV PY MVKD RT E + V+DG+LD F+ A L Sbjct: 300 SQIRSYVFHPYSMVKDHRTGYETSDTQSVMDGNLDAFIFAYL 341 >gi|225020766|ref|ZP_03709958.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii ATCC 33806] gi|224946468|gb|EEG27677.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii ATCC 33806] Length = 368 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 155/331 (46%), Positives = 218/331 (65%), Gaps = 5/331 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K DP LW + A+ + E + + ++ ++ RL D I+ ELA EE + + + Sbjct: 35 LAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSLRSRLTDLPIMYELAEEEGEGADI 94 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + + L ++ +++ + ++LSGE DS +A + + +GAGG ++ DWA ML+RMY RWA Sbjct: 95 AD--EELADLRADIDALEVTTMLSGEYDSREALINIRSGAGGVDAADWAEMLMRMYIRWA 152 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK+ K E +I EEAGIKSAT ++ G YG L EQGVHRLVRISP+D+ +RR TS Sbjct: 153 EKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLSVEQGVHRLVRISPFDNQARRQTS 212 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+ + V PVV+ + I+I +S+ R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ Sbjct: 213 FAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQN 272 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 E+SQ +NKA A +L+AKL E + Q +R E+ +G WG Q+R+YVL P+QMVK Sbjct: 273 EKSQIQNKASALRVLQAKLLERKRQEERAELDALGAGGNA--SWGNQMRNYVLHPFQMVK 330 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 DLRT E P VLDGDLD F++A + +K Sbjct: 331 DLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361 >gi|209527406|ref|ZP_03275912.1| peptide chain release factor 2 [Arthrospira maxima CS-328] gi|209492141|gb|EDZ92490.1| peptide chain release factor 2 [Arthrospira maxima CS-328] Length = 339 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 151/324 (46%), Positives = 217/324 (66%), Gaps = 9/324 (2%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETS 89 P+ W + +A+ + Q L + S +++ QD L D + EL EDD S+ QE Sbjct: 8 PNFWDDQTQAQKTL---QTLSDLKSVLQQQQDWRKTLEDTGAIAELLELEDDESLRQEAE 64 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 N+ + +++ + + LLSG D + A L ++AGAGGT++QDWA MLLRMYTRW E + Sbjct: 65 SNVVHLGRDIDRWELQQLLSGPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAQG 124 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K EI +G+EAGIKSATL ++GP AYG+LK E+G HRLVRISP+++N +R TSF+ + Sbjct: 125 YKVHLAEISEGDEAGIKSATLEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGV 184 Query: 210 WVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + P++D+ +I ++I E D I T RA G GGQ+VN ++AVRI HIPTG+ V+C QERS Sbjct: 185 EIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERS 244 Query: 269 QHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 Q +N+ +A +L+AKL + ++R + IA I E WG QIR+YV PYQMVKDLR Sbjct: 245 QLQNREKAMALLKAKLLVVAQEQRAQAIAEI-RGDLVEAAWGNQIRNYVFHPYQMVKDLR 303 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T E T+ +DV++G+LD F++A L Sbjct: 304 TGEETTAINDVMNGELDGFIQAYL 327 >gi|224534879|ref|ZP_03675448.1| peptide chain release factor 2 [Borrelia spielmanii A14S] gi|224513819|gb|EEF84144.1| peptide chain release factor 2 [Borrelia spielmanii A14S] Length = 350 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 163/359 (45%), Positives = 229/359 (63%), Gaps = 36/359 (10%) Query: 9 CLGGLFD----------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 GG FD ++ + + +F N DP Q VI+A+ +++ + +D + Sbjct: 6 TFGGSFDKKEIQAKIEKYEKEINQKNFWN----DPKKAQKVIKAQRILKNK--VDPWVEL 59 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLS-----GEA 112 I +I+D D+L C I++ D N I+ V KQ++ LL+ E Sbjct: 60 INKIKD--LDDL-----------CEIIENEKDINSLEIEFNVLEKQYKDLLTISYFKEEL 106 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N A+L +H+GAGGTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ I Sbjct: 107 DANGAFLTIHSGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AYG LK E G+HRL+RISP+D+ +RHTSF+S++V PV+D+ IEI I D RIDT Sbjct: 166 KGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN T SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K Sbjct: 226 YRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKE 285 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +E + +K EI WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 286 DEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 344 >gi|312898633|ref|ZP_07758023.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359] gi|310620552|gb|EFQ04122.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359] Length = 338 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 152/327 (46%), Positives = 212/327 (64%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + DP W + AK + +E L + ++ + D L +LA E++D S E Sbjct: 2 RMSDPDFWNSPDTAKAVSQEATKLKEEVQGHDDLVNEAADLSELYDLAAEDEDTSFTGEI 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 R+ E+E ++ LLSGE DS +A + HAGAGGTE+QDW M++RMY+RWAE+ Sbjct: 62 ERQYYRLVKELEKREVLLLLSGEYDSCNAIMAFHAGAGGTEAQDWTQMIVRMYSRWAEQH 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 + ++ G+EAG KS ++G NAYG+LK E+GVHRLVRISP+D+N RRHTSF++ Sbjct: 122 GYTIRMIDYQPGDEAGTKSCAFTVEGENAYGYLKSEKGVHRLVRISPFDTNGRRHTSFTA 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P + D E+EI+ D R+D +RASGAGGQHVN T SAVR+THIPTG+VVQCQ ERS Sbjct: 182 VDVMPELPDDAEVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVQCQNERS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +N+ LRAKL+ELE +K+E++ ++ I WG QIRSYV PY +VKD RT Sbjct: 242 QIQNREMCMKYLRAKLFELEEEKKEKLRAELTGTQQSIEWGSQIRSYVFHPYNLVKDHRT 301 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355 +E ++ V+DG++D F++ L K Sbjct: 302 GVETSNIQSVMDGNIDMFIEGYLQFLK 328 >gi|289706413|ref|ZP_06502771.1| peptide chain release factor 2 [Micrococcus luteus SK58] gi|289556908|gb|EFD50241.1| peptide chain release factor 2 [Micrococcus luteus SK58] Length = 373 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 151/350 (43%), Positives = 221/350 (63%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ L + P LW + EA+ + + H + I + Sbjct: 13 LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ELA EED+ S+L++ + L I+ +E + +LLSGE D DA + + Sbjct: 73 ESRIEDLETMVELAAEEDEPSLLEDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A L+RMY RWAE+R + T+ ++ EEAG+KS T + P A+G L Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ IEI ES+ ++D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L L+K EE A E + Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLLRKAEEDAKKKEMA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVL PYQMVKDLRT E+ +PS V DG +DDF+ A + Sbjct: 311 GDVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGI 360 >gi|325953656|ref|YP_004237316.1| peptide chain release factor 2 [Weeksella virosa DSM 16922] gi|323436274|gb|ADX66738.1| peptide chain release factor 2 [Weeksella virosa DSM 16922] Length = 366 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 148/325 (45%), Positives = 218/325 (67%), Gaps = 2/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 KT P W + +A+M M+E + + I + ++ D +L+E +E + S + Sbjct: 36 KTASPDFWDDPKKAEMFMKELRSIKKWIEDYESVEQAANDLEVLIEFN-KEGEVSDEEVQ 94 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + IKL +E +F+++LS E D+ A L++ AGAGGTES DWA+ML+RMY WAE Sbjct: 95 EHYSKTIKL-LENIEFKNMLSDEGDNLGAILQITAGAGGTESCDWASMLMRMYLMWAESH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K L G+ AG+K+ TL I G A+GWLKGE GVHRLVRISP+DSN++RHTSF S Sbjct: 154 GYKVRELNFQAGDVAGVKTVTLEIDGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFVS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +V P+VD++IEI+I+ +D + T R+ GAGGQ+VN ++ V++TH PTG+VV CQ ERS Sbjct: 214 AYVSPMVDETIEIDINPADIEMQTSRSGGAGGQNVNKVETKVQLTHKPTGIVVICQIERS 273 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q N+ +A ML+++LY++EL K+ N ES+K +I WG QIR+YV+ PY++VKD+RT Sbjct: 274 QLANRERAMEMLKSELYKIELDKKMAARNEIESNKMKIEWGSQIRNYVMHPYKLVKDVRT 333 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 E + V++GD+D F+K+ L + Sbjct: 334 GTETGNVDAVMNGDIDQFLKSYLML 358 >gi|296129092|ref|YP_003636342.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109] gi|296020907|gb|ADG74143.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109] Length = 371 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 145/328 (44%), Positives = 213/328 (64%), Gaps = 1/328 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 +++ L+ + P+LW + A+ + + + + +++ R+ D L+E+A EEDD Sbjct: 32 KIAELSEQASVPNLWDDPEAAQKVTSALSSAQSELERVDKLRGRIDDLETLVEMAAEEDD 91 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 L E L I+ ++ + +LL+GE D DA + + AGAGG ++ D+A MLLRMY Sbjct: 92 ADTLAEAEAELVGIRKDLGELEIRTLLAGEYDVRDAVVTIRAGAGGVDAADFAEMLLRMY 151 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RWAE+ + T L+ EEAG+KSAT +K P A+G L E G HRLVRISP+D+ R Sbjct: 152 LRWAERHGYATSVLDTSYAEEAGLKSATFEVKAPYAFGHLSVEAGTHRLVRISPFDNQGR 211 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R TSF+++ V P+++ + +EI ES+ ++D +R+SG GGQ VNTTDSAVR+THIPTG+VV Sbjct: 212 RQTSFAAVEVIPLIEQTDSVEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMTHIPTGIVV 271 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 Q E+SQ +N+A A +L+++L L Q+ E A + + WG Q+RSYVLQPYQ Sbjct: 272 SMQNEKSQIQNRAAALRVLQSRLL-LVRQEEERAAKKELAGDIKASWGDQMRSYVLQPYQ 330 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 MVKDLRT E +P+ V DGD+DDF++A Sbjct: 331 MVKDLRTEHEVGNPASVFDGDIDDFIEA 358 >gi|29839933|ref|NP_829039.1| peptide chain release factor 2 [Chlamydophila caviae GPIC] gi|29834280|gb|AAP04917.1| peptide chain release factor 2 [Chlamydophila caviae GPIC] Length = 337 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 165/340 (48%), Positives = 218/340 (64%), Gaps = 19/340 (5%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L +T WQ+V A + L IS +E + ++ DNL L + + Sbjct: 1 MTELEDQTLKEDFWQDVAHAGKVSERVASLKRQISDYEEFKSKV-DNLTFF---LNDSEA 56 Query: 83 SILQETSDNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDW 133 S SD R LE E+ E+ LLSGE D N +L ++AGAGGTES DW Sbjct: 57 S-----SDPELREDLEKEFSVCETILAEWETQRLLSGEVDKNPCFLTINAGAGGTESCDW 111 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ML RMY+RWA ++K E ++ +G+ AGIK T+ G AYG+ K E+GVHRLVRI Sbjct: 112 VEMLFRMYSRWASHHQWKAEVIDRQEGDVAGIKHITVKFSGEYAYGYAKAERGVHRLVRI 171 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S+ VYP +DD IEI+I +D RIDTYR+SGAGGQHVN TDSAVRIT Sbjct: 172 SPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTYRSSGAGGQHVNVTDSAVRIT 231 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG++V CQ ERSQ +N+ MLRA++Y+ LQ+R E + +K EI WG QIR Sbjct: 232 HIPTGIIVSCQSERSQIQNRESCMKMLRARMYQQVLQERLEKQLLDRKNKKEIAWGSQIR 291 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 +YV QPY +VKD+RT E + ++DG+ LDDF+KA LA Sbjct: 292 NYVFQPYTLVKDMRTGHETGNVQAMMDGELLDDFVKAYLA 331 >gi|312865919|ref|ZP_07726140.1| peptide chain release factor 2 [Streptococcus downei F0415] gi|311098323|gb|EFQ56546.1| peptide chain release factor 2 [Streptococcus downei F0415] Length = 326 Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 147/320 (45%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + I A+ +E L ++++ ++ + LE+ E+D S+ + + Sbjct: 3 EPDFWDDNITAQKTSQELNELKQTYDTFNQMEELSEESELYLEML--EEDASVQGDLEET 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMY R+ + FK Sbjct: 61 LAKLDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYQRYGNAKGFK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+SI V Sbjct: 121 VEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSIEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q+ Sbjct: 181 MPELDDTIEVEIRDDDLKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RT E Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVSALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V+DGD+D F+ A L Sbjct: 301 VAQVDKVMDGDIDGFIDAYL 320 >gi|118586958|ref|ZP_01544390.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163] gi|118432580|gb|EAV39314.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163] Length = 378 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 161/350 (46%), Positives = 213/350 (60%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q++ D D ++ K P W + A+ ++ E L N + Sbjct: 19 MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 78 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + EL EEDD + E ++++ + ++E LL+ + DSN+A LE+H Sbjct: 79 QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 138 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GGTES DWA+ L RMYTRWA+ FK E + G+ AGI SATL I G NAYG+L+ Sbjct: 139 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 198 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241 E+GVHR VRISP+DS RRHTSF SI V P +DD IEIEI D ++D YR+ GAGGQ Sbjct: 199 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 258 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN +AVR+THIPTG+VV Q ER+Q+ N+ A ML+AKLYE E QKREE Sbjct: 259 NVNKVSTAVRLTHIPTGLVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 318 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K ++ WG QIRSYV QPY+MVKDLR+ E V+DG+LD F+ A L Sbjct: 319 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYL 368 >gi|225549349|ref|ZP_03770322.1| peptide chain release factor 2 [Borrelia burgdorferi 94a] gi|225370207|gb|EEG99647.1| peptide chain release factor 2 [Borrelia burgdorferi 94a] Length = 348 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 158/348 (45%), Positives = 226/348 (64%), Gaps = 14/348 (4%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ D Sbjct: 4 TFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123 L E+A E D + L+ + L+ KQ++ LL+ E D+N+A+L +H+ Sbjct: 64 LSDLCEIAENEKDTNGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHS 115 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK Sbjct: 116 GAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKS 174 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHV Sbjct: 175 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHV 234 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K Sbjct: 235 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTK 294 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EI WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 295 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 342 >gi|259502724|ref|ZP_05745626.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041] gi|259169369|gb|EEW53864.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041] Length = 332 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 156/322 (48%), Positives = 210/322 (65%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ L+ + L ++D+L D LEL E D + QE + + Sbjct: 4 PGFWDDNEKAQQLINDNNDLKEKRDTYVALRDQLADLETNLELLELEPDPDLEQEFAASF 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + ++ + LLS + D +A LE+H GAGGTE+QDW MLLRMY RWAE+ Sbjct: 64 AKTTEALQQYRLSQLLSEKYDGKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHGLTV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E GE AG+KS TLLIKG NA+G+L+ E+GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 124 ETANYEPGEVAGVKSVTLLIKGRNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASVDVM 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V Q ERSQ N Sbjct: 184 PELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQLLN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD R+ E Sbjct: 244 RQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSGYET 303 Query: 333 TSPSDVLDGDLDDFMKATLAIK 354 + V+DG+LD F+ A L K Sbjct: 304 HNGQAVMDGELDPFINAYLQWK 325 >gi|293400349|ref|ZP_06644495.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306749|gb|EFE47992.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 346 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 160/342 (46%), Positives = 217/342 (63%), Gaps = 8/342 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD ++ L KT + W + +A++++R+ + + + +Q L Sbjct: 4 FDLTARRYKIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALNSLDETQ 63 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQ 131 EL E+ D I + Q ++E + FE LLS E D + A LE+H GAGGTES Sbjct: 64 ELLKEDFDEEIFELFELEYQ--EMEKNFADFEIKVLLSHEYDHSSAILELHPGAGGTESC 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY+RWAEK +FK L+ G+EAGIKS T L++G AYG+LK E+GVHRLV Sbjct: 122 DWADMLYRMYSRWAEKHEFKVSVLDYQPGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+D+ RRHTSF+S+ V P +D IEIEI D ++T RASGAGGQH+N TDSAVR Sbjct: 182 RISPFDAGGRRHTSFASLDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWG 309 + H PTG+V CQ RSQH+N+ +A +L+++LY+ ++++E ++A I GE E WG Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEVKANE--WG 299 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 300 SQIRSYVFHPYSMVKDHRTNHETSDVQGVMDGDLDGFIFAYL 341 >gi|323342407|ref|ZP_08082639.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463519|gb|EFY08713.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 347 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 151/284 (53%), Positives = 193/284 (67%), Gaps = 11/284 (3%) Query: 80 DDCSILQETSDNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTES 130 D +L+E +D + LEVE K+ + LLS + D +A +E+H GAGGTES Sbjct: 61 DSILLLKEEADEEFQNSLEVEVKEIQKEMESFSVLVLLSHDYDQKNAIVEIHPGAGGTES 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QD+A ML RMYTRWA+ FK L DG+EAG+KS + + G AYG+LK E+GVHRL Sbjct: 121 QDFAEMLYRMYTRWAQDHGFKISVLNYLDGDEAGLKSVSFSVSGMFAYGYLKAEKGVHRL 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS+ RRHTSF+S+ V P D+SIEI I D +DT RA+GAGGQHVN TDSAV Sbjct: 181 VRISPFDSSGRRHTSFASVDVAPEFDNSIEITILPEDIDVDTMRATGAGGQHVNKTDSAV 240 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWG 309 RITH TG+VV CQ RSQ +N+ +A ML++KLY+ E+ +K+ ++A I K I WG Sbjct: 241 RITHKKTGIVVTCQAGRSQLQNREEALMMLKSKLYQREIEEKQAQLAAIKGEHKL-IEWG 299 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYV PY MVKD RT E + DVLDGD+DDF++A L + Sbjct: 300 SQIRSYVAHPYTMVKDHRTKFETSQYGDVLDGDIDDFIEAFLKM 343 >gi|315658891|ref|ZP_07911758.1| peptide chain release factor RF2 [Staphylococcus lugdunensis M23590] gi|315496015|gb|EFU84343.1| peptide chain release factor RF2 [Staphylococcus lugdunensis M23590] Length = 334 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 158/322 (49%), Positives = 217/322 (67%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W + +A+ ++ + L ++ + + D EL EE D + E N Sbjct: 4 EPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAELEMN 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ FK Sbjct: 64 VLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQNGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P ++ IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 184 IPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ +E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAQEMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F++A L Sbjct: 303 EETGKVDAVMDGDIGPFIEAYL 324 >gi|330444184|ref|YP_004377170.1| peptide chain release factor 2 [Chlamydophila pecorum E58] gi|328807294|gb|AEB41467.1| Peptide chain release factor 2 [Chlamydophila pecorum E58] Length = 344 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 157/337 (46%), Positives = 217/337 (64%), Gaps = 19/337 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L ++ + W++V++A + + L +S E+Q ++ +E L +++ Sbjct: 11 LEKQSAQENFWEDVVKAGKISEQIAALKRQLSEYSELQKKI----ETIEFFLNDNEACAD 66 Query: 86 QETSDNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E L++ E+ ES LLSGE D N +L ++AGAGGTES DW M Sbjct: 67 PEVGKELEK-----EFAFCESCLAVWETQRLLSGEVDKNSCFLSINAGAGGTESCDWVEM 121 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY+RWA + +K + ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+ Sbjct: 122 LFRMYSRWASRHHWKVDVIDRLDGEVAGIKHITLKLTGEYAYGYAKAESGVHRLVRISPF 181 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 DSN++RHTSF+S+ V+P VDD I+IEI +D RIDT+R+SGAGGQHVN T+SAVRITH+P Sbjct: 182 DSNAKRHTSFASVDVFPEVDDQIQIEILPNDLRIDTFRSSGAGGQHVNVTESAVRITHLP 241 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TG+VV CQ ERSQ +N+ +LRA+LY+ ELQ+R E + K EI WG QIR+YV Sbjct: 242 TGIVVSCQNERSQLQNRESCMKVLRARLYQRELQERLERRLLERKDKKEIAWGSQIRNYV 301 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 QPY +VKD+RT E + ++DG+ LD+F+K LA Sbjct: 302 FQPYTLVKDVRTGYEVGNIQAMMDGELLDEFIKVYLA 338 >gi|300932665|ref|ZP_07147921.1| peptide chain release factor 2 [Corynebacterium resistens DSM 45100] Length = 378 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 155/353 (43%), Positives = 217/353 (61%), Gaps = 10/353 (2%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + + D + L + DP LW + A+ + E + + +K ++ RL Sbjct: 16 LTTIEKVLDLEALADSARELEDRAADPSLWDDPDHAQKVTSELSRVQGKLRKVKSLRQRL 75 Query: 67 CDNLILLELALE-----EDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLE 120 D ++ ++A E D E +D + ++ E+E + ++LSGE D +A + Sbjct: 76 EDLPVMYDMAEEAAAEDPDTADEAMEMADEERAELRKEIESLEVTTMLSGEYDQREAVVN 135 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG Sbjct: 136 IRSGAGGVDAADWAEMLMRMYTRWAEKSGHKVDIYDISYAEEAGIKSATFVVHGEYMYGT 195 Query: 181 LKGEQGVHRLVRISPYDSNS-RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVR+SP+ S +R TSF+ + V PVV+ + I+I +++ R+D YR+SG G Sbjct: 196 LSVEQGAHRLVRLSPFGSGGDKRQTSFAEVEVLPVVEQTDHIDIPDAEVRVDVYRSSGPG 255 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANI 298 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q +R E+ + Sbjct: 256 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDAL 315 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G WG Q+RSYVL PYQMVKDLRTN E PS VLDGDLD F++A + Sbjct: 316 GAGGNA--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGI 366 >gi|291517989|emb|CBK73210.1| bacterial peptide chain release factor 2 (bRF-2) [Butyrivibrio fibrisolvens 16/4] Length = 338 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 148/321 (46%), Positives = 211/321 (65%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P W + + M+E + + + ++ I +++D + +EL EE+D I+ + Sbjct: 2 EAPDFWTDAQVSTAKMKELKSMKDDVAVIDKLEDLYKEIEDYIELGNEEEDQEIVDTVAL 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 ++ + ++E + ++LLSGE DS+ A + +H+GAGG E+ DW ML RMY+RWA F Sbjct: 62 LIEEFENDLESLRMKTLLSGEYDSDSAIVTLHSGAGGVEACDWVQMLYRMYSRWASDMGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + L+ +G+EAGIKS T + G NAYG+LK E+G+HRLVRISP+++ +R TSF+S Sbjct: 122 AVDELDYQEGDEAGIKSVTFQVNGDNAYGYLKSEKGIHRLVRISPFNAQGKRQTSFASCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ +++EI + D RIDTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ Sbjct: 182 VMPDIEEDVDVEIRDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK +A ML+ KL L+ ++ A+ +EIGWG QIRSYVLQPY MVKDLRT Sbjct: 242 QNKDKAMQMLKTKLLLLKQEENAAKASGIRGEVSEIGWGNQIRSYVLQPYTMVKDLRTGE 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + VLDG L FM A L Sbjct: 302 ESGNADAVLDGKLTPFMNAYL 322 >gi|254445589|ref|ZP_05059065.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235] gi|198259897|gb|EDY84205.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235] Length = 368 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 163/355 (45%), Positives = 223/355 (62%), Gaps = 9/355 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + GG+FD D + L + W + A+ ++ + ++ + Sbjct: 1 MKSEPDTYGGIFDVDKKKTEIGELEAQMSAEGFWNDQKAAQAVIAQANLAKGVVNGMTAF 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAY 118 +L D + EL L E+ L + ++ LQ +K E++ + + L+ D +A Sbjct: 61 MAKLDDARAMEEL-LNEEGVDELSDEAEELQAAAVALKEELDELEIQCYLNKPHDRCNAL 119 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L V+AGAGGTES DWA +L RMY+RWAE+R FK E +++ GEEAG+ TL I G NA+ Sbjct: 120 LSVNAGAGGTESCDWAELLYRMYSRWAERRGFKVEVVDMLPGEEAGLDKVTLRIVGENAF 179 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+ E+GVHRLVRISP+DS RRHTSF ++ V ++D IEIEI D R DTYR+SG Sbjct: 180 GYANAERGVHRLVRISPFDSQKRRHTSFCAVDVVAEIEDDIEIEIEAKDLREDTYRSSGK 239 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIAN 297 GGQHVN TDSAVR+THIPTG+V CQ +RSQHKN++ A ML+A+LYE +E +KR + Sbjct: 240 GGQHVNKTDSAVRLTHIPTGIVAACQSDRSQHKNRSAAMKMLKARLYERMEDEKRSAMEK 299 Query: 298 I-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + GE K EIGWG QIRSYV QPYQMVKDLRT +E + V+DGD+D F+ L Sbjct: 300 MYGE--KGEIGWGNQIRSYVFQPYQMVKDLRTGVETGNIQAVMDGDIDRFVSGWL 352 >gi|239917286|ref|YP_002956844.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus luteus NCTC 2665] gi|239838493|gb|ACS30290.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus luteus NCTC 2665] Length = 373 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 151/350 (43%), Positives = 220/350 (62%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ L + P LW + EA+ + + H + I + Sbjct: 13 LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ELA EED+ S+L + + L I+ +E + +LLSGE D DA + + Sbjct: 73 ESRIEDLETMVELAAEEDEPSLLDDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A L+RMY RWAE+R + T+ ++ EEAG+KS T + P A+G L Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ IEI ES+ ++D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L L+K EE A E + Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLLRKAEEDAKKKEMA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVL PYQMVKDLRT E+ +PS V DG +DDF+ A + Sbjct: 311 GDVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGI 360 >gi|332662344|ref|YP_004445132.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM 1100] gi|332331158|gb|AEE48259.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM 1100] Length = 358 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 155/349 (44%), Positives = 222/349 (63%), Gaps = 3/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L LG D +N + ++ + DP W + A+ +++E + N ++ K Sbjct: 9 LRERLVSLGRYLDVENRLIQIEEQEQLSLDPTFWNDPKRAETILKELKSHKNWVAQYKAA 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D +LLE E + +E +E +F + L+ D + LE++ Sbjct: 69 EAEVDDAEVLLEFNKEGEATE--EEVDQKYAEALAVIEGLEFHTTLNQPEDELNVVLEIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY WA++R FK L DG+ AG+KSA++ I+G +G LK Sbjct: 127 AGAGGTEACDWAEMLYRMYMMWAQRRGFKFTELNRQDGDVAGLKSASIEIEGEYVFGLLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY+S +R TSFSS++V+P+VDDSIEIEI+ +D DT+RASGAGGQH Sbjct: 187 GENGVHRLVRVSPYNSQGKRMTSFSSVFVHPMVDDSIEIEINPADLEWDTFRASGAGGQH 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVR+ H+P+G+V +CQQERSQH N+ +A ML+++LYE EL+K++ ES Sbjct: 247 VNKTESAVRVRHLPSGIVAECQQERSQHMNRDKAMQMLKSRLYERELEKQKAEKETIESG 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K + WG QIRSYVL + VKD RT + + VL+GD+D+F+KA L Sbjct: 307 KMKNEWGSQIRSYVLDD-RRVKDHRTGYQTSQTDAVLNGDIDEFLKAFL 354 >gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC 49030] gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC 49030] Length = 376 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 145/320 (45%), Positives = 207/320 (64%), Gaps = 3/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P LW + A+ + + H + +++ R+ D +L+ + +E D L E + + Sbjct: 42 PDLWDDPDVAQAITSKLSHKQGTLEKLQKFDQRIEDVELLVSMGEDEGDEDALNEAAAEV 101 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +++K E+ + +LLSGE D A + V AGAGG ++ DWA ML RMY RWAE R +K Sbjct: 102 EKLKSELAALEISTLLSGEFDERSAVITVRAGAGGDDATDWAQMLTRMYIRWAENRGYKV 161 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ E AG+KSAT+ + P AYG L E G HRLVRISP+D+ RR TSF+++ V Sbjct: 162 EELDTSYAEGAGVKSATVQVNAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVV 221 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P+++ + I+I E+D RID +R+SG GGQ VNTTDSAVRITH+PTGVVV Q E+SQ +N Sbjct: 222 PLIEQTDHIDIDENDLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGVVVSMQNEKSQIQN 281 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 +A A +L+++L L+L++ EE A + + + WG Q+RSYV PYQMVKDLRT E Sbjct: 282 RAAAMRVLQSRL--LQLKREEEEAQKKDLAGDIKASWGDQMRSYVTHPYQMVKDLRTGYE 339 Query: 332 KTSPSDVLDGDLDDFMKATL 351 +P V DGD+DDF++A + Sbjct: 340 VNNPQAVFDGDIDDFLEAGI 359 >gi|289642137|ref|ZP_06474289.1| peptide chain release factor 2 [Frankia symbiont of Datisca glomerata] gi|289508100|gb|EFD29047.1| peptide chain release factor 2 [Frankia symbiont of Datisca glomerata] Length = 366 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 153/349 (43%), Positives = 216/349 (61%), Gaps = 4/349 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D +R + L + DP LW + A+ + R + IS ++ + Sbjct: 12 LDATLAGIEAVLDLDTLRRRAADLEREAADPQLWSDQDRAQAVTRRLSSVRGDISRVEAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D + L+L +L E +++L + ++ + +LLSGE D DA +++ Sbjct: 72 RRRLDDVIAALDLGD----DDLLAEAANDLPTLARDISALEVRTLLSGEYDERDAIVQLS 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ DW MLLRMY RWAE+ + E + + EEAG+KSAT IK P AYG L+ Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYAAEVFDTSEAEEAGLKSATFQIKAPYAYGTLR 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S +EI + + RID +R+SG GGQ Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVEQSDHVEIDDKELRIDIFRSSGPGGQG 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 248 VNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRLTGG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ +G QIR+YVL PYQMVKDLRT +E + + VLDGD+D+F+ A + Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSGTAAVLDGDIDEFIDAEI 356 >gi|313901293|ref|ZP_07834780.1| peptide chain release factor 2 [Clostridium sp. HGF2] gi|312953901|gb|EFR35582.1| peptide chain release factor 2 [Clostridium sp. HGF2] Length = 349 Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 164/349 (46%), Positives = 216/349 (61%), Gaps = 22/349 (6%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD ++ L + T W + A+ L+R+ N I I E ++L LI L Sbjct: 8 FDLAEKKHKIQELTSMTLQDDFWNDPQHAQTLIRQL----NGIKDIVESYEKLNSALIGL 63 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAG 124 E + +L+E D+ E EY + E LLS E D + A LE+H G Sbjct: 64 E-----ETHDLLKEDYDDEIFELFEAEYLEMEKNFDDFEIKILLSHEYDHSSAILELHPG 118 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTES DWA+ML RMY+RWAEK+ FK L+ G+EAGIKS T L++G AYG+LK E Sbjct: 119 AGGTESCDWADMLYRMYSRWAEKKGFKVSVLDYLPGDEAGIKSVTFLVEGDMAYGYLKAE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +GVHRLVRISP+DS RRHTSF+S+ V P ++ IEIEI D ++T RASGAGGQH+N Sbjct: 179 KGVHRLVRISPFDSGGRRHTSFASLDVMPQFNNEIEIEIKPEDLIVETKRASGAGGQHIN 238 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESS 302 TDSAVR+ H PTG+V CQ RSQH+N+ +A +L+++LY+ ++++E +A I GE Sbjct: 239 KTDSAVRMVHKPTGLVAICQNGRSQHENREEALRVLKSRLYQKMIEEQEARLAEIKGEQK 298 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L Sbjct: 299 ANE--WGSQIRSYVFHPYSMVKDHRTSCETSDVQGVMDGDLDAFIFAYL 345 >gi|312891182|ref|ZP_07750704.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter paludis DSM 18603] gi|311296349|gb|EFQ73496.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter paludis DSM 18603] Length = 286 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 127/249 (51%), Positives = 192/249 (77%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F+++LS E D A L++ AGAGGTES DWA+ML+RMY WA+K +K ++ +G+ Sbjct: 30 EFKNMLSAEEDQLSAVLQITAGAGGTESCDWASMLMRMYMMWAQKNGYKITEIDYQEGDV 89 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AG+K+ TL G +YG+LKGE GVHRLVR+SP+D+N++RHTSF+S++VYP+VDD+I I+ Sbjct: 90 AGVKTVTLQFDGDFSYGYLKGENGVHRLVRVSPFDANAKRHTSFASVYVYPLVDDTINID 149 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 ++ +D +T+R+ GAGGQ+VN ++AVR+ H P+G++++ Q+ RSQ +NK A +L++ Sbjct: 150 VNPADIEFETFRSGGAGGQNVNKVETAVRLYHKPSGIIIKNQESRSQLQNKENAIRLLKS 209 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +LYE E++KR EI++ E +K +I WG QIR+YVL PY++VKDLRT+ E ++ VLDG+ Sbjct: 210 QLYEAEMRKRMEISDAIEGNKKKIEWGSQIRNYVLHPYKLVKDLRTDYETSNAQAVLDGE 269 Query: 343 LDDFMKATL 351 LD+F+KA L Sbjct: 270 LDEFLKAYL 278 >gi|15827278|ref|NP_301541.1| peptide chain release factor 2 [Mycobacterium leprae TN] gi|221229756|ref|YP_002503172.1| peptide chain release factor 2 [Mycobacterium leprae Br4923] gi|6093957|sp|O32885|RF2_MYCLE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790917|sp|B8ZUV0|RF2_MYCLB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|2326693|emb|CAB11005.1| peptide chain release factor 2 [Mycobacterium leprae] gi|13092827|emb|CAC30176.1| putative peptide chain release factor 2 [Mycobacterium leprae] gi|219932863|emb|CAR70761.1| putative peptide chain release factor 2 [Mycobacterium leprae Br4923] Length = 374 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 163/359 (45%), Positives = 224/359 (62%), Gaps = 15/359 (4%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R+ L + DP LW + + A+ + E H + I+E+ Sbjct: 12 LDSTLTTVERVLDVEGLRTRIEKLEHEASDPKLWDDQVRAQRVTSELSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEE------DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116 + RL D +L ELA EE E L+ +++++E + +LLSGE D + Sbjct: 72 RRRLDDLPVLYELAAEERAAAAASGMEAFAEADAELKALRVDIEATEVRTLLSGEYDERE 131 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A + + +GAGG ++ DWA ML+RMY RWAE+ K+ E L+ EEAG+KSAT + P Sbjct: 132 ALITIRSGAGGVDAADWAEMLMRMYIRWAEQHKYGVEVLDTSYAEEAGVKSATFAVHAPF 191 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 AYG L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+S Sbjct: 192 AYGTLASEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVEITDHIDIPEGDVRVDVYRSS 251 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEI 295 G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A +L+AKL E + L++R E+ Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGLVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEL 311 Query: 296 ANI---GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + G SS WG QIRSYVL PYQMVKDLR E +P+ VLDGD+D F++A + Sbjct: 312 DALKGRGGSS-----WGNQIRSYVLHPYQMVKDLRNEYEVGNPTAVLDGDIDGFLEAGI 365 >gi|194476812|ref|YP_002048991.1| peptide chain release factor 2 [Paulinella chromatophora] gi|171191819|gb|ACB42781.1| peptide chain release factor 2 [Paulinella chromatophora] Length = 354 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 213/340 (62%), Gaps = 2/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD R L P W +A+ MR+ + + +++ Q + D Sbjct: 5 VFDVPALKARQQDLEQLASQPKFWDLQDQAQKQMRQLDEVREQLEKLRQWQGTIADAKAT 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LEL E D S+L E ++ +QR+K ++ + E LL+G D A + ++AGAGGT++QD Sbjct: 65 LELYNIEPDESMLNEGNEGMQRLKNNLDRWELERLLNGTYDKGGAVISINAGAGGTDAQD 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRW+E K EI +GEEAGIKS T I G AYG+L+ E+G HRLVR Sbjct: 125 WARMLLRMYTRWSEDHGMKVNICEISEGEEAGIKSVTFEIDGSYAYGYLRNEKGTHRLVR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V P +++ I++ I + D + T R+ GAGGQ+VN ++AVRI Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLNEDIDMFIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R EIA+I E WG Q Sbjct: 245 LHIPTGLAVRCTQERSQLQNKEKAMALLKAKLMVIAQEQRAAEIADI-RGEIVEAAWGNQ 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PYQMVKDLRTN E T V+DGDLD F++A L Sbjct: 304 IRNYVFHPYQMVKDLRTNKETTDVQGVMDGDLDLFIQALL 343 >gi|162449904|ref|YP_001612271.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56'] gi|161160486|emb|CAN91791.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56'] Length = 350 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 214/329 (65%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L L T W + +A+ ++R+R +++ + + + + D LEL E D Sbjct: 2 LQDLTQTTLSSGFWNDQEKAQAVLRKRAQVESKLEVAQRLGREIEDLAEYLELGAAEGDE 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 ++ + I + + + +LSG AD +A + +H GAGGT+++DWA+MLLRMY Sbjct: 62 GVIADADAQADAIAGRLRKVELDRMLSGPADRGNAIVSIHPGAGGTDAKDWASMLLRMYL 121 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ E+R +KTE ++ DG+EAGI + TL + G AYG+L+ E GVHRLVR+SP++++ R Sbjct: 122 RFCERRGYKTEIIDYQDGDEAGIDAVTLTVSGDAAYGYLRSEAGVHRLVRMSPFNADHTR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 T+F+++ V P DD I I+++E D I T RA G GGQ+VN ++AVR+ HIPTG+ + Sbjct: 182 QTAFAAVEVTPDSDDEINIQVNEKDIEITTMRAGGKGGQNVNKVETAVRLRHIPTGLNIV 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 C+ ERSQH+N+A A +L+AKLYE+ELQKRE ++K+ I +G QIR+YVL PY++ Sbjct: 242 CRAERSQHQNRAMAMKVLKAKLYEMELQKREAEVQAYNAAKSSINFGSQIRNYVLAPYRL 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD+RT+ E T VLDGDL+ F++A L Sbjct: 302 VKDVRTSTEATDVDAVLDGDLEGFIEAYL 330 >gi|269925864|ref|YP_003322487.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum terrenum ATCC BAA-798] gi|269789524|gb|ACZ41665.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum terrenum ATCC BAA-798] Length = 372 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 160/352 (45%), Positives = 219/352 (62%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ D +N + L + LW + EA+ +M+ L + + +I Sbjct: 12 LRERISTFKEHLDLENKRLEIEKLEQRAASSELWADPAEAQKVMKNLNDLKDQLEVWSKI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +LL+LA EED S E + ++ ++ ++ + + E LLSG D DA + +H Sbjct: 72 ERRLEDAEVLLDLAYEEDSASDFHEAASQIRALENQLNHLELELLLSGSYDQEDAIIAIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A GG ++QDWA+ML+RMY RWA++R ++ E + +GEEAG KSAT+ IKG AYG+ K Sbjct: 132 AREGGIDAQDWASMLVRMYLRWAQRRGWQAELVSSIEGEEAGYKSATIEIKGKYAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVR+SP+D RRHTSF+ + V P V+++ E++I E D +IDTYRAS AGGQH Sbjct: 192 AEAGQHRLVRLSPFDQAHRRHTSFALVEVLPDVEETPEVQIREEDLKIDTYRASSAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM--LRAKLYELELQKREEIANIGE 300 VN T SAVRITHIPTG+VV CQ ERSQ +NK A + R EL Q E+ GE Sbjct: 252 VNKTSSAVRITHIPTGIVVTCQNERSQFQNKETALKILRARLLELELRRQAEEQARLKGE 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 T GWG QIRSYVL PY MVKD RT E + VLDG++D F++A L+ Sbjct: 312 HIAT--GWGSQIRSYVLHPYTMVKDHRTGYEVSDVESVLDGEIDPFIEAYLS 361 >gi|312149296|gb|ADQ29367.1| peptide chain release factor 2 [Borrelia burgdorferi N40] Length = 359 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 158/344 (45%), Positives = 225/344 (65%), Gaps = 14/344 (4%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + ++ + + W + A+ +++ + L N I +E+ +++ D L Sbjct: 19 LFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKDLSDL 78 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHAGAGG 127 E+A E D S L+ + L+ KQ++ LL+ E D+N+A+L +H+GAGG Sbjct: 79 CEIAENEKDTSGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHSGAGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 131 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 189 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 190 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 249 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 250 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 309 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 310 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 353 >gi|296394151|ref|YP_003659035.1| peptide subunit release factor 2 [Segniliparus rotundus DSM 44985] gi|296181298|gb|ADG98204.1| peptide chain release factor 2 [Segniliparus rotundus DSM 44985] Length = 372 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 152/354 (42%), Positives = 216/354 (61%), Gaps = 8/354 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + D D ++ L T+ DP LW++ + + + + + Sbjct: 12 LATTLCTVESALDLDKLRAEIADLETQAADPSLWEDQERGQEVTSGLARKQATLRAVTGL 71 Query: 63 QDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA +E+ L+E + ++ E+E + +LL+GE D +A + Sbjct: 72 RSRLDDLHVLYELAEDEEGAQGQEALEEADTERKTLRAEIESLEVRTLLNGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K E +I EEAGIKSAT +K AYG Sbjct: 132 TIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEVYDISYAEEAGIKSATFAVKSAYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ RR TSF+ + V PVV + I++ E++ R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFADVEVLPVVGTTDHIDVPEAEIRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI- 298 GQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK A +L+AKL E + +E N Sbjct: 252 GQSVNTTDSAVRITHLPTGIVVTCQNEKSQLQNKLSAMRVLQAKLLERRRHEEQEQLNAL 311 Query: 299 -GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G+ + WG Q+RSYVL PYQMVKDLRT E+++P VLDG +D F+++ + Sbjct: 312 KGDGGTS---WGTQMRSYVLAPYQMVKDLRTEYEESNPGAVLDGAIDGFLESGI 362 >gi|311747486|ref|ZP_07721271.1| peptide chain release factor 2 [Algoriphagus sp. PR1] gi|126574844|gb|EAZ79215.1| peptide chain release factor 2 [Algoriphagus sp. PR1] Length = 315 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 141/267 (52%), Positives = 192/267 (71%), Gaps = 2/267 (0%) Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E S ++ K VE + + +LS E D +A LE++ GAGGTES DWA++L+RMY W Sbjct: 39 EEMSREFEKAKSTVEELELKKMLSSEEDQLNAVLEINPGAGGTESNDWASILMRMYIMWG 98 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK +K +++ G+ AGIKS TL +GP AYG+LK E GVHRLVRISP+DS RRHTS Sbjct: 99 EKNGYKVREVDVQQGDVAGIKSCTLEFEGPLAYGFLKSETGVHRLVRISPFDSGGRRHTS 158 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S++ YP VDDSIEI+I+ +D + T R+ GAGGQ+VN ++ V++TH PTG+VV CQ Sbjct: 159 FASVYAYPEVDDSIEIDINPADIELHTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQI 218 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ N+ +A ML+++L++LE++KR EIA I ESSK + +G QIR+YVL PY++VK Sbjct: 219 ERSQLANREKAMQMLKSRLFQLEVEKRNAEIAKI-ESSKLRVDFGSQIRNYVLHPYKLVK 277 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D RT E + VLDG L++FMKA L Sbjct: 278 DARTGHETSDTQHVLDGGLNEFMKAYL 304 >gi|88803344|ref|ZP_01118870.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P] gi|88780910|gb|EAR12089.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P] Length = 365 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 146/325 (44%), Positives = 218/325 (67%), Gaps = 6/325 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD--RLCDNLILLELALEEDDCSILQ 86 KT +P W + EA++ ++E L ++ + Q L D++I+L +E D + Sbjct: 36 KTTNPGFWDHPKEAEVAIKE---LRFKKKWVTDYQHAITLNDDVIVLYEFYKEGDVA-ET 91 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + +++ +E +F ++LS E DS A +++ AGAGGTES DW ML RMY+ WAE Sbjct: 92 EMDEQFEKVSSFLEDIEFRNMLSEEGDSLAATIQITAGAGGTESCDWVEMLSRMYSMWAE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 K+ FK + L G+ AGIK+ T+ I+G A+GWLKGE GVHRLVRISP+DSN +RHT+F Sbjct: 152 KQGFKLKTLNYQAGDVAGIKTITIEIEGDFAFGWLKGENGVHRLVRISPFDSNGKRHTTF 211 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 S++V+PV DDSIEI ++ +D I T R+SGAGGQ+VN ++ V++TH PTG+ +QC Sbjct: 212 GSVYVFPVADDSIEIAVNPADIEIVTARSSGAGGQNVNKVETKVQLTHKPTGIQIQCSNS 271 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH N+A A ML+++LYE+EL+K++ E+ K + WG QIR+YV+ PY++VKD+ Sbjct: 272 RSQHDNRATAMKMLKSQLYEIELKKQQATRADIEAGKLKNEWGSQIRNYVMHPYKLVKDV 331 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351 RT E + V+DG+++ F+K+ L Sbjct: 332 RTAYETGNVDAVMDGNINPFLKSYL 356 >gi|149277162|ref|ZP_01883304.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39] gi|149232039|gb|EDM37416.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39] Length = 324 Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 133/253 (52%), Positives = 188/253 (74%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E + +++LS + D A +++ AGAGGTES DWA ML+RMY W EK +K + Sbjct: 69 IEALELKNMLSSKEDQLHAVMQITAGAGGTESCDWAAMLMRMYIMWGEKNGYKVTEQDYQ 128 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE AG+KS TL G +YG+LKGE GVHRLVRISP+DSN+RRHTSF+S++VYP+VDD+ Sbjct: 129 EGEVAGVKSVTLQFAGDFSYGYLKGENGVHRLVRISPFDSNARRHTSFASVYVYPLVDDT 188 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEIE+ +S+ +T+R+ GAGGQ+VN ++AVR+ H P+G+V++ Q+ RSQ +NK A Sbjct: 189 IEIEVKDSEIEFETFRSGGAGGQNVNKVETAVRLYHKPSGIVIKNQESRSQLQNKENAMR 248 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +L+++LYE E++KR E E SK +I WG QIR+YVL PY++VKDLRTN E ++ V Sbjct: 249 LLKSQLYEAEMRKRMEATAAIEGSKKKIEWGSQIRNYVLHPYKLVKDLRTNYETSNAQGV 308 Query: 339 LDGDLDDFMKATL 351 LDG+L++F+KA L Sbjct: 309 LDGELNEFLKAYL 321 >gi|172041186|ref|YP_001800900.1| peptide chain release factor 2 [Corynebacterium urealyticum DSM 7109] gi|171852490|emb|CAQ05466.1| peptide chain release factor RF-2 [Corynebacterium urealyticum DSM 7109] Length = 377 Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 161/359 (44%), Positives = 218/359 (60%), Gaps = 15/359 (4%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R L + DP LW + A+ + E + + I+E+ Sbjct: 12 LEGTLTTIERVLDLDELDWRARELEDQAADPSLWDDPDHAQQVTSELSRVQAKLKKIREL 71 Query: 63 QDRLCDNLILLELALEE---------DDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 + RL D +L +A EE D ++ +E L + +E + ++LSGE D Sbjct: 72 RQRLEDLPVLYNMAEEEAAEDPAASEDAVAMAEEERSAL---RAAIESLEITTMLSGEYD 128 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 +A + + +GAGG ++ DWA MLLRMYTRWAE+ K + +I EEAGIKSAT +I Sbjct: 129 QREALVNIRSGAGGVDAADWAEMLLRMYTRWAEQHGHKVDIYDISYAEEAGIKSATFVIH 188 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G YG L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IE+ ++D R+D Y Sbjct: 189 GDYMYGTLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDADVRVDVY 248 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL LE +++E Sbjct: 249 RSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQE 306 Query: 294 EIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E A + + WG Q+RSYVL PYQMVKDLRT E P VLDGDLD ++A + Sbjct: 307 EKAEMDALGAGGNASWGNQMRSYVLHPYQMVKDLRTEYEVGDPQKVLDGDLDGLIEAGI 365 >gi|289551384|ref|YP_003472288.1| peptide chain release factor 2 [Staphylococcus lugdunensis HKU09-01] gi|289180915|gb|ADC88160.1| peptide chain release factor 2 [Staphylococcus lugdunensis HKU09-01] Length = 334 Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 157/322 (48%), Positives = 217/322 (67%), Gaps = 3/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W + +A+ ++ + L ++ + + D EL EE D + E + Sbjct: 4 EPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAELEMD 63 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ FK Sbjct: 64 VLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQNGFK 123 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S V Sbjct: 124 VETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASCDV 183 Query: 212 YP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P ++ IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERSQ Sbjct: 184 IPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 243 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+L+++ +E+A I + EIGWG QIRSYV PY MVKD RTN Sbjct: 244 KNREAAMKMLKSKLYQLKLEEQAQEMAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 302 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E V+DGD+ F++A L Sbjct: 303 EETGKVDAVMDGDIGPFIEAYL 324 >gi|282865194|ref|ZP_06274247.1| peptide chain release factor 2 [Streptomyces sp. ACTE] gi|282560117|gb|EFB65666.1| peptide chain release factor 2 [Streptomyces sp. ACTE] Length = 368 Score = 288 bits (738), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 159/355 (44%), Positives = 222/355 (62%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSRLSHLQAEVRKTEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D L E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLGVLFELAEDEGDADALAEAEAELVSVRKALDEMEVRTLLSGEYDAREAVVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFTVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMN-AL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEIGNPEAVFNGEIDGFIEAGIRWRK 364 >gi|284989796|ref|YP_003408350.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM 43160] gi|284063041|gb|ADB73979.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM 43160] Length = 370 Score = 288 bits (738), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 157/352 (44%), Positives = 224/352 (63%), Gaps = 6/352 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D + ++ L + P LW +V A+ L + +L + ++E Sbjct: 11 ELDTTLRSIEAVLDVDRLRREVAELEQQASAPDLWNDVEAAQALTSKLSYLQGDLRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L E+A+EE D + E L ++ ++ + +LLSGE DS +A + + Sbjct: 71 LRSRLDDVGLLHEMAVEESDEATAAEAERELASLRQAIDELEVRTLLSGEYDSREALVTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + AGG ++ D+A ML+RMY RWAE+ ++ E ++ EEAGIKSAT +K P AYG L Sbjct: 131 RSEAGGVDAADFAEMLMRMYLRWAERHRYPVELYDVSYAEEAGIKSATFAVKQPYAYGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + ++I E++ RID +R+SG GGQ Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVDIPENEIRIDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY--ELELQKREEIANIG 299 VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A +L+A+L E Q+ E A G Sbjct: 251 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQARLLARRQEEQRAEMDALRG 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E S WG Q+RSYVL PYQMVKDLRT E + S VLDGD+D F++A + Sbjct: 311 EGSS----WGNQMRSYVLHPYQMVKDLRTEQETGNTSAVLDGDIDPFIEAGI 358 >gi|328794147|ref|XP_003252002.1| PREDICTED: peptide chain release factor 2-like, partial [Apis mellifera] Length = 276 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 140/265 (52%), Positives = 183/265 (69%) Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E +LQ+++ E + + LLSG+ DS++A +E+H GAGGTE+ DW MLLRMY R+A+ Sbjct: 2 EVETDLQKLQSEFHNYELDLLLSGKYDSHNALIEIHPGAGGTEAMDWGQMLLRMYQRYAD 61 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 FK E GEEAG+KS + + G NAYG +K E GVHRLVRISP+DS RRHTSF Sbjct: 62 ICGFKFEINNYEPGEEAGLKSVSAKVCGKNAYGLMKSENGVHRLVRISPFDSAKRRHTSF 121 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DDSI+++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG V Q + Sbjct: 122 ASVEVIPEIDDSIKVDINPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGFVTTSQAQ 181 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDL Sbjct: 182 RSQLQNRETAMNELRAKLFHLEEEKKRQHKQALKGDQKEIGWGSQIRSYVFHPYNLVKDL 241 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351 RT E + S V+DG L F+ + L Sbjct: 242 RTGYETSDTSGVMDGKLQPFVYSYL 266 >gi|118617904|ref|YP_906236.1| peptide chain release factor 2 [Mycobacterium ulcerans Agy99] gi|166225111|sp|A0PQZ6|RF2_MYCUA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|118570014|gb|ABL04765.1| peptide chain release factor 2 PrfB [Mycobacterium ulcerans Agy99] Length = 371 Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 162/354 (45%), Positives = 225/354 (63%), Gaps = 8/354 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R+ L + DP LW + A+ + E H + ++E+ Sbjct: 12 LDSALTTVERVLDVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE+ + + E + ++ ++E + +LLSGE D +A + Sbjct: 72 RRRLEDLPVLYELAAEEEGAAAGEALTEADAEFKALRADIEATEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LERKRIEERAEL- 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGI 362 >gi|57234653|ref|YP_181313.1| peptide chain release factor 2, programmed frameshift [Dehalococcoides ethenogenes 195] gi|57225101|gb|AAW40158.1| peptide chain release factor 2, programmed frameshift [Dehalococcoides ethenogenes 195] Length = 362 Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 156/329 (47%), Positives = 211/329 (64%), Gaps = 8/329 (2%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSI 84 L + + P WQ+ A+ M++ + ++ R+ D LLEL AL +D S+ Sbjct: 31 LESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRGLEQRVND---LLELFALTHEDPSL 87 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E + + E++ + SG+ DS +A L VHAGAGG ESQDWA MLLRM+ RW Sbjct: 88 GNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTVHAGAGGVESQDWAGMLLRMFMRW 147 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AEK+ F E L+ GEEAGIKSATL I+G AYG+LK E GVHRL+R+SP+D++ RHT Sbjct: 148 AEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSPFDADHARHT 207 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+ + V P +DS++I+I D +ID +R+SG GGQ+V +AVR+THIP+G+VV Q Sbjct: 208 SFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIPSGIVVASQ 267 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRSYVLQPYQM 322 ERSQH+N+ A +L +KL +E+ KR EE A I GE E WG QIRSYVL PY+M Sbjct: 268 TERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERISAE--WGNQIRSYVLHPYKM 325 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RT+ E + VL+G+LD F+ A L Sbjct: 326 VKDHRTDYEVGNAEAVLEGELDGFINAYL 354 >gi|332707784|ref|ZP_08427811.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L] gi|332353487|gb|EGJ33000.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L] Length = 294 Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 151/285 (52%), Positives = 201/285 (70%), Gaps = 2/285 (0%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D +LEL E D ++L E NL ++ E++ + E LLSG D+ A L ++AGAGG Sbjct: 3 DTKAILELLELETDDALLAEAQTNLTQLNKELDRWELEQLLSGTYDAKGAVLTINAGAGG 62 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 T++QDWA++LLRMYTRWAE +K E+ G+EAGIKSATL I G AYG+LK E+G Sbjct: 63 TDAQDWADLLLRMYTRWAENHGYKVHLAELSPGDEAGIKSATLEIDGLRAYGYLKAEKGT 122 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+++N +R TSF+ + V P VD+++E+EI E D I T RA G GGQ+VN + Sbjct: 123 HRLVRISPFNANGKRQTSFAGVEVMPAVDNTVELEIPEKDLEITTSRAGGKGGQNVNKVE 182 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEI 306 +AVRI HIPTG+ V+C QERSQ +NK +A +L+AKL + E Q+ +EIA I E Sbjct: 183 TAVRIVHIPTGLAVRCTQERSQLQNKEKALVLLKAKLLVIAEEQRAQEIAEI-RGDMVEA 241 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIR+YV PYQMVKDLRT++E T+ +DVLDG+LD F++A L Sbjct: 242 AWGNQIRNYVFHPYQMVKDLRTSVETTAVNDVLDGNLDLFIEAYL 286 >gi|308176991|ref|YP_003916397.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117] gi|307744454|emb|CBT75426.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117] Length = 371 Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 152/350 (43%), Positives = 220/350 (62%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D D ++ L+ + P+LW + A+++ + H + + + + Sbjct: 13 LRSTFSAIEDVSDVDQIKADIAVLSEEAGVPNLWDDPAAAQIVTSKLSHRQSELERLTRL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L+ELA EDD L E L I+ + + +LLSGE DS A + + Sbjct: 73 RTRIDDLEVLVELAELEDDADTLDEAEKELVSIQKSLADLEIVTLLSGEFDSRGAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE+R +K ++ EEAG+KSAT I P A+G L Sbjct: 133 SGAGGVDAADFAEMLLRMYLRWAERRGYKATVMDTSYAEEAGLKSATFEIDAPYAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ R+D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDTIEIPESEIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301 VNTTDSAVR+THIPTGVVV Q E+SQ +N+A A +L+++L L L+K +E A E + Sbjct: 253 VNTTDSAVRMTHIPTGVVVSMQNEKSQIQNRAAALRVLQSRL--LLLKKEQEDAQKKEFA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVL PYQMVKDLRT E + VLDG++DDF+ A + Sbjct: 311 GDVKATWGDQMRSYVLNPYQMVKDLRTEHEVGNTQAVLDGEIDDFIDAGI 360 >gi|160947120|ref|ZP_02094287.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270] gi|158446254|gb|EDP23249.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270] Length = 349 Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 153/324 (47%), Positives = 213/324 (65%), Gaps = 4/324 (1%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + AK ++ ++L I + ++ D++ LE+ +E+ +E N+ Sbjct: 25 FWNDSKSAKSILDNMKNLKFKIETFTSLSRKIEDSIEFLEILSDEEFMEYEKEALKNIYN 84 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 I+ E + +L+ GE DSN+A LE+HAGAGGT++QDW ML R+YTRW + F Sbjct: 85 IEKEYLSLKLNTLMVGEYDSNNAILEIHAGAGGTDAQDWTEMLQRLYTRWINSKGFSFSI 144 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L+ + E GIKS TL + G NAYG+LKGE+GVHRLVRISPYDS+++RHTSF+S+ V+P Sbjct: 145 LDYNSDTEGGIKSVTLKVDGKNAYGFLKGEKGVHRLVRISPYDSSNKRHTSFASVDVFPE 204 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +++ +IEI+ D RIDTYR+ GAGGQHVN TDSAVRITHIPTGV V CQ ERSQ N+ Sbjct: 205 IEEITDIEINPKDLRIDTYRSGGAGGQHVNKTDSAVRITHIPTGVTVSCQSERSQMFNRD 264 Query: 275 QAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A L AKL ++ ++ RE+I +I + ++I WG QIRSYV QPY +VKD RT E Sbjct: 265 TAMRQLIAKLLIIKQEENREKIEDI-QGKYSQIAWGSQIRSYVFQPYTLVKDHRTGYETG 323 Query: 334 SPSDVLDGDLDDFMKATLA--IKK 355 + V++G++D+F+ L IKK Sbjct: 324 NVESVMNGNIDEFINQYLCELIKK 347 >gi|309777858|ref|ZP_07672804.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 3_1_53] gi|308914419|gb|EFP60213.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 3_1_53] Length = 327 Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 161/328 (49%), Positives = 209/328 (63%), Gaps = 22/328 (6%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ L+R+ N I I E ++L L LE + +L+E D+ Sbjct: 7 FWSDPQHAQTLIRQL----NGIKDIVESYEKLNSALEGLE-----ETHDLLKEDYDDEIF 57 Query: 95 IKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E EY + E LLS E D + A LE+H GAGGTES DWA+ML RMY+RWA Sbjct: 58 ELFEAEYMEMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRMYSRWA 117 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK+ FK L+ GEEAGIKS T L++G AYG+LK E+GVHRLVRISP+DS RRHTS Sbjct: 118 EKKGFKVSVLDYLPGEEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGGRRHTS 177 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +D IEIEI D ++T RASGAGGQH+N TDSAVR+ H PTG+V CQ Sbjct: 178 FASLDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLVATCQN 237 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWGRQIRSYVLQPYQMV 323 RSQH+N+ +A +L+++LY+ ++++E ++A I GE E WG QIRSYV PY MV Sbjct: 238 GRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEQKANE--WGSQIRSYVFHPYSMV 295 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KD RT+ E + V+DGDLD F+ A L Sbjct: 296 KDHRTSCETSDVQGVMDGDLDAFIFAYL 323 >gi|7388055|sp|P74476|RF2_SYNY3 RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 372 Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 146/321 (45%), Positives = 215/321 (66%), Gaps = 3/321 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ +++ + + Q + D+ ++EL EDD ++L E L Sbjct: 45 PDFWDDTDQAQQILQTLNETKSQLEQWGIWQQQWQDSQAIVELLELEDDQALLTEAETTL 104 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++++ E++ + + LLSG D+ A L ++AGAGGT++QDWA MLLRMYTRW+EK+ +K Sbjct: 105 EQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQDWAEMLLRMYTRWSEKQGYKV 164 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 EI +G+EAG+KS TL I+G AYG+LK E+G HRLVRISP+++N +R TSF+ + V Sbjct: 165 HLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLVRISPFNANGKRQTSFAGVEVM 224 Query: 213 PVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P++ +++I ++I + D I T RA G GGQ+VN ++AVRI H+PTG+ V+C QERSQ + Sbjct: 225 PLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVRIVHLPTGLAVRCTQERSQLQ 284 Query: 272 NKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK +A +L+AKL LE Q+ + IA I E WG QIR+YV PYQ+VKDLRTN+ Sbjct: 285 NKEKALAILKAKLLIVLEEQRAQAIAEI-RGDMVEAAWGTQIRNYVFHPYQLVKDLRTNV 343 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T V+DG+L DF++A L Sbjct: 344 ETTDVGGVMDGELSDFIEAYL 364 >gi|119511140|ref|ZP_01630258.1| peptide chain release factor 2 [Nodularia spumigena CCY9414] gi|119464235|gb|EAW45154.1| peptide chain release factor 2 [Nodularia spumigena CCY9414] Length = 288 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 141/274 (51%), Positives = 191/274 (69%), Gaps = 2/274 (0%) Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D ++LQE + ++ E++ + + LLSG D+ A L ++AGAGGT++QDWA ML+ Sbjct: 4 ETDEALLQEAESTVTKLNRELDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLM 63 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE +K E +G+EAGIKSATL I G AYG+L+ E G HRLVRISP+++ Sbjct: 64 RMYTRWAEDHGYKVSLAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNA 123 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+ + + P +D S+++EI E D I T RA G GGQ+VN ++AVRI H+PTG Sbjct: 124 NGKRQTSFAGVEIMPQLDHSVQLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTG 183 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVL 317 + V+C +ERSQ +NK +A L+AKL + QK +E+A I E WG QIR+YV Sbjct: 184 IAVRCTEERSQLQNKDKALARLKAKLLVIAREQKAQEVAEI-RGDMVEASWGNQIRNYVF 242 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PYQMVKDLRTN+E T+ SDV+DGDLD F++A L Sbjct: 243 HPYQMVKDLRTNVETTAISDVMDGDLDSFIQAYL 276 >gi|294790676|ref|ZP_06755834.1| peptide chain release factor 2 [Scardovia inopinata F0304] gi|294458573|gb|EFG26926.1| peptide chain release factor 2 [Scardovia inopinata F0304] Length = 370 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 148/335 (44%), Positives = 210/335 (62%), Gaps = 3/335 (0%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N +++ L + P LW + A+++ N + +++ RL D L EL Sbjct: 28 NLAEKIVSLEKEASAPGLWDDQENAQLVTSRLSQTQNEAKRLDDLERRLDDIATLYELGS 87 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EEDD E L ++ ++ + ++LL GE D+ A + + +GAGG ++ DWA ML Sbjct: 88 EEDDQDSKAEAEKELTAVRSDLSDLEIQTLLDGEYDNRAAVVTIRSGAGGVDAADWAQML 147 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +RMY RWAE+ +K + ++ EEAGIKSAT + P AYG L E G HRLVRISP+D Sbjct: 148 MRMYLRWAERHHYKVQIMDTSYAEEAGIKSATFEVDAPYAYGKLSVEGGTHRLVRISPFD 207 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +NSRR TSF+++ V P+V+ + I+I +SD R+DTY + G GGQ VNTT SAVRITHIPT Sbjct: 208 NNSRRQTSFAAVEVIPLVEPTDHIDIPDSDIRVDTYMSHGPGGQGVNTTYSAVRITHIPT 267 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYV 316 G+VV Q ERSQ +N+A A ++L+++L L +++ EE A E + + WG Q+RSYV Sbjct: 268 GIVVTMQDERSQIQNRAAAMSVLQSRL--LVMKQEEEAAKKKELAGDVKASWGDQMRSYV 325 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 L PYQMVKDLRT E + P V DGD+D F+ A + Sbjct: 326 LHPYQMVKDLRTGYETSDPQKVFDGDIDAFIDAGI 360 >gi|325105358|ref|YP_004275012.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter saltans DSM 12145] gi|324974206|gb|ADY53190.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter saltans DSM 12145] Length = 362 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 132/249 (53%), Positives = 190/249 (76%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F+++LS E D +A L++ AGAGGTES DWA+ML+RMY W EK K + +G+ Sbjct: 107 EFKNMLSAEEDQLNAVLQITAGAGGTESCDWASMLMRMYIMWGEKHGCKVIEQDSQEGDV 166 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIKS TL +G AYG LKGE GVHRLVRISP+DSN++RHTSF+S++VYP++DD+I+I+ Sbjct: 167 AGIKSVTLQFEGDFAYGHLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLIDDNIDIQ 226 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 ++ +D +T+R+ GAGGQ+VN ++AVR+ H PTG++++ Q+ RSQ +NK A +L++ Sbjct: 227 VNPADLEFETFRSGGAGGQNVNKVETAVRLYHKPTGIIIKNQESRSQLQNKENAIRLLKS 286 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +LYE+E++KR E + ES K +I WG QIR+YVL PY+++KD RT+ E ++ DVLDGD Sbjct: 287 QLYEIEMRKRREKSAAIESDKKKIEWGSQIRNYVLHPYKLIKDNRTDYETSNVQDVLDGD 346 Query: 343 LDDFMKATL 351 LD+F+KA L Sbjct: 347 LDEFIKAYL 355 >gi|315606122|ref|ZP_07881153.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180 str. F0310] gi|315312404|gb|EFU60490.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180 str. F0310] Length = 372 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 147/359 (40%), Positives = 228/359 (63%), Gaps = 11/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + D ++++ LN K P LW + A+ + H + + I ++ Sbjct: 12 LRTTMDNIVAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQEVTSALSHRQSELDRITQM 71 Query: 63 QDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +R+ D ++E+A E+ D IL E +L++++ ++ + +LL GE D +A + Sbjct: 72 SERIDDLEAMVEMAAEDPDEGAEILAEAEGDLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ D+A +LLRMY RWAE+ + T+ ++ EEAG+KSAT ++ P AYG Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GG Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL----YELELQKREEIA 296 Q VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L +E E K++E+A Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELA 311 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++S WG Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 312 GDVKAS-----WGDQMRSYVLQPYQMVKDLRTEFESGNPQSVFDGDIDGFINAGIRWRK 365 >gi|317486373|ref|ZP_07945201.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6] gi|316922362|gb|EFV43620.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6] Length = 329 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 140/243 (57%), Positives = 170/243 (69%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D DA LE+H GAGGTE+QDWA ML RMY RWA+ F E L+ G+EAGIKS Sbjct: 75 SSEEDHADAILEIHPGAGGTEAQDWAQMLQRMYLRWADSHGFSVEELDFLPGDEAGIKSV 134 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 +L I G N YG+LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P D IEIEI ESD Sbjct: 135 SLRISGENVYGFLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGDDIEIEIKESDL 194 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 R+D + ASG GGQ VNTT SAVRITHIP+G+ VQCQ ERSQH NK A +LR +LY+LE Sbjct: 195 RVDIFCASGPGGQGVNTTYSAVRITHIPSGISVQCQNERSQHHNKDSAMRILRGRLYDLE 254 Query: 289 LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 L KR+ + K I +G QIR+Y LQPY++VKD R N E VLDG +D ++ Sbjct: 255 LSKRDAARQAEYAGKNAISFGSQIRTYTLQPYRLVKDHRNNCEIGDTDAVLDGRIDKLLR 314 Query: 349 ATL 351 L Sbjct: 315 DYL 317 >gi|219684785|ref|ZP_03539727.1| peptide chain release factor 2 [Borrelia garinii PBr] gi|219671730|gb|EED28785.1| peptide chain release factor 2 [Borrelia garinii PBr] Length = 350 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 156/348 (44%), Positives = 222/348 (63%), Gaps = 14/348 (4%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG FD ++ + + W + A+ +++ + L N I +E+ +++ D Sbjct: 6 AFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 65 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123 L E+ E D + L+ I+ V KQ++ LL+ E D N+A+L +H+ Sbjct: 66 LSDLCEIVENEKDINSLE--------IEFNVLEKQYKDLLTISYFKEELDINNAFLTIHS 117 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK Sbjct: 118 GAGGTEACDWVTMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKS 176 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRL+RISP+D+ +RHTSF+S++V PV+D+ IEI I D RIDTYRASGAGGQHV Sbjct: 177 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHV 236 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K ++ + K Sbjct: 237 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQELK 296 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EI WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 297 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 344 >gi|329946372|ref|ZP_08293939.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str. F0386] gi|328527348|gb|EGF54346.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str. F0386] Length = 373 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 151/358 (42%), Positives = 222/358 (62%), Gaps = 6/358 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D ++ELA EE D IL E +L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGDDAAEILAEAESDLTAISKDLSDLEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ ++ + L EEAG+KS T + P AY Sbjct: 131 VTIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L L+++EE A Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRL--LLLKQQEEDAKK 308 Query: 299 GE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 E + + WG Q+RSYVL PYQMVKDLRT+ E +P V DGD+D F+ A + +K Sbjct: 309 KELAGDVKASWGDQMRSYVLNPYQMVKDLRTSFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|158521778|ref|YP_001529648.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3] gi|158510604|gb|ABW67571.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3] Length = 337 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 160/331 (48%), Positives = 221/331 (66%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +RL+ + W + A L++ER L + + + E+ + D +LLELA EE Sbjct: 3 ERLAEIEALVAREGAWDDPERAATLLKERSLLSDRLDLLSELGREVEDAEVLLELAEEEA 62 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D E + ++ ++ ++E + LS E D DA + ++AGAGGT++QDWA ML RM Sbjct: 63 DSDAAAEVTRRVEGVRKKIEKLSIDLTLSDEDDPADAIVAINAGAGGTDAQDWAEMLFRM 122 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTRW E++ +K E ++ G+EAGIKSAT KG NA+G+LK E GVHRLVRISP++++ Sbjct: 123 YTRWIERKGYKLEMIDHQPGDEAGIKSATFSAKGLNAFGYLKNESGVHRLVRISPFNASG 182 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +R TSF+S++V+P +D I+I+I E D RIDT+RASGAGGQHVN T SAVRITH P+GVV Sbjct: 183 KRQTSFASVFVFPQIDRQIDIDIDEKDLRIDTFRASGAGGQHVNKTSSAVRITHYPSGVV 242 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQQERSQ +N+ A +LRA+LY+LE K+ + E+ K +I WG QIRSY L PY Sbjct: 243 VQCQQERSQLRNREIAMAVLRARLYKLEKDKQNQKLQDMEAGKDDIAWGSQIRSYFLHPY 302 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Q KD RT+ E VLDG++D F++A L Sbjct: 303 QKAKDHRTDFEIGDVYSVLDGEIDPFIEAVL 333 >gi|303247215|ref|ZP_07333489.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ] gi|302491374|gb|EFL51262.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ] Length = 307 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 144/279 (51%), Positives = 195/279 (69%), Gaps = 3/279 (1%) Query: 75 LALEEDDCS--ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+L +DD S +L ++ + + E+ + + E D+ DA LE+H GAGGTE+QD Sbjct: 23 LSLAKDDGSPEVLDALAEQIATLDGELADAELAAFFRSE-DNVDAILEIHPGAGGTEAQD 81 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMY RWAE+++F + L+ G+EAG+KS TL GP AYG L E+G+HRL+R Sbjct: 82 WAEMLLRMYRRWAERKEFGVKILDYLPGDEAGLKSVTLQFSGPYAYGMLAAEKGIHRLIR 141 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+DS+ RRHTSF+S+ VYP I+I+I E D RID +RASG GGQHVN T SA+RI Sbjct: 142 ISPFDSSGRRHTSFASVDVYPDAGVDIDIDIKEDDLRIDVFRASGPGGQHVNKTSSAIRI 201 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VVQCQ E+SQH+N+ A +L+A+LY+LEL+K + SK IG+G QI Sbjct: 202 THLPTGIVVQCQNEKSQHRNRETAMKVLKARLYDLELKKLQAEKQESYESKNAIGFGSQI 261 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y +QPY++VKD RT ++ VLDGDLD F++ L Sbjct: 262 RTYTMQPYRLVKDHRTGVDAGDVEAVLDGDLDKFIRGYL 300 >gi|282900531|ref|ZP_06308475.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii CS-505] gi|281194584|gb|EFA69537.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii CS-505] Length = 291 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 143/281 (50%), Positives = 195/281 (69%), Gaps = 2/281 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++EL E D +LQE + ++ +++ + + LLSG DS A L ++AGAGGT++Q Sbjct: 1 MVELLELEADEGLLQEAETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA ML+RMYTRWAE +K E +G+EAGIKSATL I G AYG+L+ E G HRLV Sbjct: 61 DWAFMLMRMYTRWAEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+++N +R TSF+ + V P +D+S+ +EI E D I T RA G GGQ+VN ++AVR Sbjct: 121 RISPFNANGKRQTSFAGVEVMPQIDNSVTLEIPEKDLEITTSRAGGKGGQNVNKVETAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310 I HIPTGV V+C +ERSQ +NK +A L+AKL + ++R +EIA I E WG Sbjct: 181 IVHIPTGVAVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEI-RGDMVEASWGN 239 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQ+VKDLRTN+E T+ DV++GDLD+F++A L Sbjct: 240 QIRNYVFHPYQIVKDLRTNLETTAIGDVMNGDLDNFIQAYL 280 >gi|219685347|ref|ZP_03540166.1| peptide chain release factor 2 [Borrelia garinii Far04] gi|219673120|gb|EED30140.1| peptide chain release factor 2 [Borrelia garinii Far04] Length = 350 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 157/348 (45%), Positives = 221/348 (63%), Gaps = 14/348 (4%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG FD ++ + + W + A+ +++ + L N I +E+ +++ D Sbjct: 6 AFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 65 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123 L E+ E D + L+ I+ V KQ++ LL+ E D N A+L +H+ Sbjct: 66 LSDLCEIIENEKDINSLE--------IEFNVLEKQYKDLLTISYFKEELDINSAFLTIHS 117 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK Sbjct: 118 GAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKS 176 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRL+RISP+D+ +RHTSF+S++V PV+D+ IEI I D RIDTYRASGAGGQHV Sbjct: 177 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHV 236 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + K Sbjct: 237 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQELK 296 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EI WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 297 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 344 >gi|148240661|ref|YP_001226048.1| peptide chain release factor 2 [Synechococcus sp. WH 7803] gi|147849200|emb|CAK24751.1| Protein chain release factor B [Synechococcus sp. WH 7803] Length = 356 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 151/334 (45%), Positives = 211/334 (63%), Gaps = 9/334 (2%) Query: 26 LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 LN + +D P W + A+ MR + + + Q + D LEL Sbjct: 11 LNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLDTWQGAVSDAQATLELYDL 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D +L E L +++ +++ + E LLSGE D A L ++AGAGGT++QDWA MLL Sbjct: 71 EPDDDMLGEAQSGLTQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 130 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE R K E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRLVRISP+++ Sbjct: 131 RMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVRISPFNA 190 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+ + V P +++ ++I+I + D + T R+ GAGGQ+VN ++AVRI H+PTG Sbjct: 191 NDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTG 250 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317 + V+C QERSQ +NK +A +L+AKL + ++R EIA+I E WG QIR+YV Sbjct: 251 LAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 309 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PYQMVKDLRT E V+DGDLD F++A L Sbjct: 310 HPYQMVKDLRTQEETNDVQGVMDGDLDPFIQALL 343 >gi|212697040|ref|ZP_03305168.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM 7454] gi|212675815|gb|EEB35422.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM 7454] Length = 238 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 139/235 (59%), Positives = 177/235 (75%), Gaps = 2/235 (0%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +HAGAGG E+ DWA ML+RMYTR+ E+R FK + ++++ E GIKSAT+ IKG AYG+ Sbjct: 3 IHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAYGY 62 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI D RIDTYRASGAGG Sbjct: 63 LKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGAGG 122 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIG 299 QHVN TDSAVRITHIPTGV+ Q ERSQ +NK A +L AKL ++ E + RE+I +I Sbjct: 123 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDI- 181 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + T+I WG QIRSYV PY +VKD RTN E + V+DGD+D F+ A LA K Sbjct: 182 QGNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 236 >gi|154506039|ref|ZP_02042777.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149] gi|153793538|gb|EDN75958.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149] Length = 314 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 157/310 (50%), Positives = 221/310 (71%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L +++ I+++ D +L+E++ EE D +QE + L R + E E + + Sbjct: 1 MQVLKSLQDSVKQIEQMYADYEDLGLLIEMSQEEQDEETVQEIEEELLRFEGEFEELRIQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LL+GE D + A + +HAGAGGTES DWANML RMYTRWAEK+ F E L+ +G+ AGI Sbjct: 61 TLLTGEYDRDHAIVTLHAGAGGTESCDWANMLYRMYTRWAEKKGFSVEVLDYLEGDVAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K T ++G NAYG+L+ E+GVHRLVRISP+++ +R TSF+S V P +++ I+IEI++ Sbjct: 121 KGVTFEVRGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEEDIDIEIND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH NK +A ML+AKLY Sbjct: 181 DDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++ Q++ + + EIG+G QIRSYV+QPY +VKD RTN+E ++ + VLDG+LD Sbjct: 241 LMKQQEQADKVSGIRGEIKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVLDGNLDP 300 Query: 346 FMKATLAIKK 355 F+ A L+ K Sbjct: 301 FINAYLSAPK 310 >gi|148243347|ref|YP_001228504.1| peptide chain release factor 2 [Synechococcus sp. RCC307] gi|147851657|emb|CAK29151.1| Protein chain release factor B [Synechococcus sp. RCC307] Length = 349 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 145/320 (45%), Positives = 211/320 (65%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A+ MR+ + + ++ + + D LEL E D ++L+E + L Sbjct: 19 PDFWDDQNNARKQMRQLDDVKAQLEQLRTWRASVDDAAATLELYDLEPDDALLEEANGGL 78 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 Q ++L ++ + E LLSG D A + ++AGAGGT++QDWA ML+RMYTRWAE R K Sbjct: 79 QELRLALDRWELERLLSGTYDQEGAVISINAGAGGTDAQDWALMLMRMYTRWAEDRGMKV 138 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E+ +GEEAGIKS T+ ++G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V Sbjct: 139 TVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVRISPFNANDKRQTSFAGVEVM 198 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +++ +++EI + D + T R+ GAGGQ+VN ++AVRI HIPTG+ V+C QERSQ +N Sbjct: 199 PKLEEEVDLEIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQN 258 Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +A +L++KL + ++R EIA+I E WG QIR+YV PYQMVKDLRTN E Sbjct: 259 KEKAMALLKSKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVFHPYQMVKDLRTNEE 317 Query: 332 KTSPSDVLDGDLDDFMKATL 351 T V+DGDLD F+++ L Sbjct: 318 TTDVQGVMDGDLDPFIQSLL 337 >gi|160878415|ref|YP_001557383.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg] gi|160427081|gb|ABX40644.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg] Length = 333 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 161/321 (50%), Positives = 220/321 (68%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P+ W + +++ M+E ++L + +S ++ + D L LLE+ EE+D ++ E Sbjct: 2 EEPNFWDSQEKSQAYMKELKNLKDIVSEYNGLKQQYDDILTLLEMGYEEEDPDLIPEIEQ 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L++ +E + +LLS E D ++A L +HAGAGGTES DWA+ML RMY RWA+K+ + Sbjct: 62 ELEQFIDALEELRLNTLLSDEYDKDNAILTLHAGAGGTESCDWASMLYRMYQRWADKKGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 TE L+ DGEEAG KS TL I G NAYG LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 TTELLDFLDGEEAGYKSVTLQINGLNAYGHLKSERGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ I+IEI++ D RIDTYR+SGAGGQHVN T SA+RITHIPTG VVQCQ ERSQ Sbjct: 182 VMPDIEEDIDIEINDDDLRIDTYRSSGAGGQHVNKTSSAIRITHIPTGTVVQCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +NK +A ML+AKLY + ++ + +I +G QIRSYVLQPY MVKD RTN Sbjct: 242 QNKDKAMQMLKAKLYLKKKEENAAKESGIRGEIRDINFGNQIRSYVLQPYTMVKDHRTNT 301 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 + ++ VLDG++D F+ A L Sbjct: 302 DVSNALGVLDGNIDPFINAYL 322 >gi|51598335|ref|YP_072523.1| peptide chain release factor 2 [Borrelia garinii PBi] gi|51572906|gb|AAU06931.1| peptide chain release factor 2 [Borrelia garinii PBi] Length = 350 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 156/348 (44%), Positives = 222/348 (63%), Gaps = 14/348 (4%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG FD ++ + + W + A+ +++ + L N I +E+ +++ D Sbjct: 6 AFGGSFDKKEIQDKIEKYEKEIHQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIKD 65 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHA 123 L E+ E D + L+ I+ V KQ+++LL+ E D N A+L +H+ Sbjct: 66 LSDLCEIVENEKDINSLE--------IEFNVLEKQYKNLLTISYFKEELDINSAFLTIHS 117 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK Sbjct: 118 GAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSITIEIKGEYAYGLLKS 176 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRL+RISP+D+ +RHTSF+S++V PV+D+ IEI I D RIDTYRASGAGGQHV Sbjct: 177 EVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHV 236 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K ++ + K Sbjct: 237 NKTSSAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQEVK 296 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EI WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 297 KEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 344 >gi|312147930|gb|ADQ30589.1| peptide chain release factor 2 [Borrelia burgdorferi JD1] Length = 358 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 158/328 (48%), Positives = 220/328 (67%), Gaps = 20/328 (6%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP Q VI+A+ +++ N I +E+ +++ D L E+A E D + L+ + Sbjct: 43 DPKRAQEVIKAQSILK------NKIDPWEELINKIKDLSDLCEIAENEKDTNGLEIEFNT 96 Query: 92 LQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 L+ KQ++ LL+ E D+N+A+L +H+GAGGTE+ DW ML RMY+R+AE Sbjct: 97 LE--------KQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAE 148 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RISP+D+ +RHTSF Sbjct: 149 RKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSF 207 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S++V PV+DD IEI I D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q + Sbjct: 208 ASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSD 267 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKNK A +L+++LYE K +E + +K EI WG QIRSYV QPY +VKD Sbjct: 268 RSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDH 327 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT E ++ + V+DG++D+F++ L K Sbjct: 328 RTKFENSNTTSVMDGNIDNFIEEYLKWK 355 >gi|163840102|ref|YP_001624507.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC 33209] gi|229470354|sp|A9WPT6|RF2_RENSM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|162953578|gb|ABY23093.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC 33209] Length = 374 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 146/339 (43%), Positives = 217/339 (64%), Gaps = 1/339 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + D D+ + ++ L+ + P LW N EA+ + + H + + ++ + R+ D +L Sbjct: 26 VIDADSLRKDIAVLSEQAGVPDLWDNPAEAQKVTSKLSHAQSKLERLETLTARIDDLEVL 85 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +ELA E D L E S L ++ ++ + +LL+GE D +A + + +GAGG ++ D Sbjct: 86 VELAESEHDEDSLAEASKELVSLQKSLQELEVVTLLAGEYDEREAVVTIRSGAGGVDAAD 145 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L E G HRLVR Sbjct: 146 FAEMLLRMYLRWAERHGYPTSVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVR 205 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ RR TSF+++ V P+++ + IEI ++D R+D +R+SG GGQ VNTTDSAVR+ Sbjct: 206 ISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNDIRVDVFRSSGPGGQSVNTTDSAVRL 265 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG VV Q E+SQ +N+A A +L+++L L+ Q+ E+ + + WG Q+ Sbjct: 266 THLPTGTVVSMQNEKSQLQNRAAATRVLQSRLLLLKKQQ-EDAEKKALAGDVKASWGDQM 324 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYVL PYQMVKDLRT E + S VLDGD+DDF+ A + Sbjct: 325 RSYVLNPYQMVKDLRTEHEVGNTSGVLDGDIDDFIDAGI 363 >gi|317495961|ref|ZP_07954323.1| peptide chain release 2 [Gemella moribillum M424] gi|316913865|gb|EFV35349.1| peptide chain release 2 [Gemella moribillum M424] Length = 372 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 155/332 (46%), Positives = 213/332 (64%), Gaps = 1/332 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QR++ + D W + A L+ E + + + + D L + ++E +ED Sbjct: 31 QRVAEIENMMLDADFWNDSETASTLVTESKSIKKELDEFSAMLDYLNHSEEMIEFLNDED 90 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D I QE + ++ +K +VE F L + E D+N A LE+HAGAGGT++ DWA ++LRM Sbjct: 91 DEEIYQELIETVRDLKQQVEDFSFRLLFAEEYDNNTAILEIHAGAGGTDATDWAEIMLRM 150 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R+ K+ L G+ G+KSATL I+G AYG LKGE+GVHR+VRISP+D + Sbjct: 151 YERFFSKQGLTYSYLNYQSGDITGVKSATLKIEGDFAYGLLKGEKGVHRVVRISPFDPSG 210 Query: 201 RRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 +RHTSF+SI V P D+ IEI+ D +IDTYRA GAGGQH+NTTDSAVRITH+PTG+ Sbjct: 211 KRHTSFASIDVIPEFSDEEANIEINIEDLKIDTYRAQGAGGQHINTTDSAVRITHLPTGI 270 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VVQ Q ERSQ KN+ A L++KL++LEL+++E + +IGWG QIRSYV P Sbjct: 271 VVQSQAERSQIKNRDFAMKNLKSKLHQLELEEKERELASIRGEQKDIGWGSQIRSYVFTP 330 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y MVKD RTN E ++ V+DG++ DF+ A L Sbjct: 331 YTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362 >gi|88809865|ref|ZP_01125371.1| peptide chain release factor 2 [Synechococcus sp. WH 7805] gi|88786249|gb|EAR17410.1| peptide chain release factor 2 [Synechococcus sp. WH 7805] Length = 356 Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 151/334 (45%), Positives = 212/334 (63%), Gaps = 9/334 (2%) Query: 26 LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 LN + +D P W + A+ MR + + ++ Q + D LEL Sbjct: 11 LNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLETWQGAVSDAQATLELYDL 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D +L E L +++ +++ + E LLSGE D A L ++AGAGGT++QDWA MLL Sbjct: 71 EPDEDMLGEAQGGLNQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 130 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE R K E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRLVRISP+++ Sbjct: 131 RMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVRISPFNA 190 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+ + V P +++ ++I+I + D + T R+ GAGGQ+VN ++AVRI HIPTG Sbjct: 191 NDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTG 250 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317 + V+C QERSQ +NK +A +L+AKL + ++R EIA+I E WG QIR+YV Sbjct: 251 LAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 309 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PYQMVKDLRT E V+DGDL+ F++A L Sbjct: 310 HPYQMVKDLRTQEETNDVQGVMDGDLEPFIQALL 343 >gi|183981542|ref|YP_001849833.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M] gi|238689234|sp|B2HGJ2|RF2_MYCMM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|183174868|gb|ACC39978.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M] Length = 371 Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 161/354 (45%), Positives = 226/354 (63%), Gaps = 8/354 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R+ L + DP LW + A+ + E H + ++E+ Sbjct: 12 LDSALTTVERVLDVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE+ + + ++ + ++ ++E + +LLSGE D +A + Sbjct: 72 RRRLEDLPVLYELAAEEEGAAAGEALAEADAEFKALRADIEATEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL LE ++ EE A + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL--LERKRIEERAEL- 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGI 362 >gi|220918000|ref|YP_002493304.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans 2CP-1] gi|219955854|gb|ACL66238.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans 2CP-1] Length = 309 Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 143/266 (53%), Positives = 192/266 (72%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D L ELA E D + E ++ + + ++E + + +LSG D+ A +EV +GA Sbjct: 12 LDDAQALCELAEEARDEATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVEVKSGA 71 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ DWA ML RMY R+ E+R ++ E ++ GEEAGI SA+ +++G + YGWLK E+ Sbjct: 72 GGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGWLKAEK 131 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+D N+RR TSF+++ V P ++D I I+I E+D RIDTYR+SGAGGQ VN Sbjct: 132 GVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGGQKVNK 191 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+TH+PTG+VV Q ERSQ KN++ AW +LRAKLY+LE +KR + E+ K + Sbjct: 192 TDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAEALKKD 251 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIE 331 I +G QIRSYVLQPYQMVKDLRT +E Sbjct: 252 IDFGSQIRSYVLQPYQMVKDLRTGVE 277 >gi|227494927|ref|ZP_03925243.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436] gi|226831379|gb|EEH63762.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436] Length = 372 Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 148/337 (43%), Positives = 218/337 (64%), Gaps = 5/337 (1%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA---LE 78 R++ L+ K P LW N A+ + E H + I+++ +R+ D ++E+A L+ Sbjct: 31 RIAELSEKAAVPDLWDNPEAAQAVTSELSHTQAELGRIEKMVERIDDLETIVEMAEEDLD 90 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D +L+E +L I+ + + ++LLSGE D A + + AGAGG ++ D+A MLL Sbjct: 91 EKDL-LLEEAEADLAGIRQALADLEIKTLLSGEYDERSAVVTIRAGAGGVDAADFAEMLL 149 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RWAE+ + T+ ++ EEAG+KSAT + P AYG L E G HRLVRISP+D+ Sbjct: 150 RMYLRWAERNGYPTKVMDTSYAEEAGLKSATFEVNAPYAYGTLSVEAGTHRLVRISPFDN 209 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RR TSF+++ V P+++ + IEI ES+ +ID +R+SG GGQ VNTTDSAVR+THIPTG Sbjct: 210 QGRRQTSFAAVEVIPLIETTDHIEIPESELKIDVFRSSGPGGQSVNTTDSAVRMTHIPTG 269 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV Q E+SQ +N+A A +L+++L +L + E+ A + + WG Q+RSYVLQ Sbjct: 270 IVVSMQNEKSQIQNRAAALRVLQSRLLQLR-HEEEQAAKKALAGDVKASWGDQMRSYVLQ 328 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 PYQMVKDLRT+ E + V DG++DDF+ A + +K Sbjct: 329 PYQMVKDLRTSHENGNTGAVFDGEIDDFINAGIRWRK 365 >gi|293189308|ref|ZP_06608031.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309] gi|292821771|gb|EFF80707.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309] Length = 373 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 145/345 (42%), Positives = 223/345 (64%), Gaps = 11/345 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D ++++ LN K P LW + A+ + H + + I ++ +R+ D ++++A Sbjct: 26 DKLREQIAELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQMSERIDDLEAMVDMA 85 Query: 77 LEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E+ D IL E +L++++ ++ + +LL GE D +A + + +GAGG ++ D+A Sbjct: 86 AEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFA 145 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +LLRMY RWAE+ + T+ ++ EEAG+KSAT ++ P AYG L E G HRLVRIS Sbjct: 146 EILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRIS 205 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GGQ VNTTDSAVR+TH Sbjct: 206 PFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTH 265 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKL----YELELQKREEIANIGESSKTEIGWGR 310 IPTG+VV Q E+SQ +N+A A +L+++L +E E K++E+A ++S WG Sbjct: 266 IPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGDVKAS-----WGD 320 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 321 QMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365 >gi|315037900|ref|YP_004031468.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112] gi|325956373|ref|YP_004291785.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC] gi|312276033|gb|ADQ58673.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112] gi|325332938|gb|ADZ06846.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC] gi|327183192|gb|AEA31639.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1118] Length = 332 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 P W + +A+ L+ E L + SF+K +Q D +EL EE D + +ET ++ Sbjct: 4 PDFWNDQEKAQKLISENNVLKEKRDSFLK-LQKGYEDESTAVELLREEPDPDLQKETEED 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ E + + LLSG+ DS++A +E+H GAGGTE+ DW MLLRMY R+ + FK Sbjct: 63 LATLQDEFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDSAGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GEEAG+KS + I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ V Sbjct: 123 FEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ + Sbjct: 183 IPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT E Sbjct: 243 NRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG L F+ + L Sbjct: 303 TADANGVMDGKLQPFIYSYL 322 >gi|22298070|ref|NP_681317.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1] gi|22294248|dbj|BAC08079.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1] Length = 290 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 139/251 (55%), Positives = 187/251 (74%), Gaps = 4/251 (1%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + E LLSG D N+A + ++AGAGGT++QDWA MLLRMYTRWAE+ ++T E+ +GEE Sbjct: 35 ELEQLLSGPYDKNNAIVTINAGAGGTDAQDWAEMLLRMYTRWAERHGYQTHLAELSEGEE 94 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIKSATL I+G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P +D S+ +E Sbjct: 95 AGIKSATLEIRGRYAYGYLRSEKGTHRLVRISPFNANGKRQTSFAGVDVMPELDQSVTVE 154 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I ESD I T R+ G GGQ+VN ++AVRI H PTG+ V+C QERSQ +NK +A +L+A Sbjct: 155 IPESDLEITTSRSGGKGGQNVNKVETAVRIVHKPTGLAVRCTQERSQLQNKEKALAILKA 214 Query: 283 KLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 KL + + QK +EIA+I GE+ E WG QIR+YV PYQ+VKDLRT +E T+ DV+D Sbjct: 215 KLLVIAQEQKAKEIADIRGEA--VEAAWGNQIRNYVFHPYQLVKDLRTEVETTAIQDVMD 272 Query: 341 GDLDDFMKATL 351 G+LD F++A L Sbjct: 273 GNLDPFIQAYL 283 >gi|225012847|ref|ZP_03703280.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A] gi|225002969|gb|EEG40946.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A] Length = 314 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 142/283 (50%), Positives = 200/283 (70%), Gaps = 11/283 (3%) Query: 80 DDCSILQE--TSDNLQRIKLEVEYK---------QFESLLSGEADSNDAYLEVHAGAGGT 128 DD +L E S + + +++ +Y+ +F ++LS E D A L++ AGAGGT Sbjct: 22 DDLEVLMEFEKSGDAEAVEVNSQYESSLELLEALEFRNMLSDEGDDLSAVLQITAGAGGT 81 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ES DWA ML+RMY W EK+ +K + L G+ AGIK+ TL ++G A+GWLKGE GVH Sbjct: 82 ESCDWAEMLMRMYLMWGEKQGYKIKELNHQAGDVAGIKTVTLELEGDFAFGWLKGENGVH 141 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DSN++RHTSF+S++VYP+VDDSIEI IS SD +T RASGAGGQ+VN ++ Sbjct: 142 RLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIVISPSDYTWETMRASGAGGQNVNKVET 201 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+ H PTG++++ + RSQ +NK +A +LR++LYE+ELQK+ + E+SK +I W Sbjct: 202 AVRLRHHPTGIIIENSETRSQLENKNKAMQLLRSQLYEIELQKKLSARDEIEASKKKIEW 261 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIR+YV+ PY++VKD+RT E T V++G +D F+KA L Sbjct: 262 GSQIRNYVMHPYKLVKDVRTQHEVTDVDAVMNGQIDPFLKAYL 304 >gi|297571771|ref|YP_003697545.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM 20595] gi|296932118|gb|ADH92926.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM 20595] Length = 376 Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 150/349 (42%), Positives = 219/349 (62%), Gaps = 20/349 (5%) Query: 19 AVQRLSFLNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 AV ++ L TK D P LW + +A+ + + H + + + ++ +R+ D Sbjct: 21 AVTDVTALQTKIADLTEQSGAPDLWDDPEKAQGVTSQLSHAQSELDRVVKMGERVADLET 80 Query: 72 LLELALEEDD------CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L ++A+EE + + E L+R++ ++ + ++LLSGE D DA + + +GA Sbjct: 81 LYDMAVEESESDAAMGAELFAEVDGELERVRTDLSELEIKTLLSGEYDERDAVVTIRSGA 140 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG ++ DWA ML RMY RWAE+R +KT+ ++ EEAGIKS T + P AYG L E Sbjct: 141 GGVDAADWAQMLQRMYLRWAERRGYKTKVMDTSYAEEAGIKSTTFEVSAPYAYGTLSVEA 200 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HRLVRISP+D+ RR TSF+++ V P+++ + I+I ES+ +ID +R+SG GGQ VNT Sbjct: 201 GTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIDIPESELKIDVFRSSGPGGQSVNT 260 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKT 304 TDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L LQKR EE A I + Sbjct: 261 TDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRL----LQKRHEEEAAIKKELAG 316 Query: 305 EI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ WG Q+RSYVL PYQMVKDLRT E + V DGD+D F+ A + Sbjct: 317 DVKGAWGDQMRSYVLHPYQMVKDLRTGFEVGNTESVFDGDIDGFIDAGI 365 >gi|291568918|dbj|BAI91190.1| peptide chain release factor 2 [Arthrospira platensis NIES-39] Length = 316 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 145/300 (48%), Positives = 206/300 (68%), Gaps = 6/300 (2%) Query: 57 SFIKEIQD---RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 S +++ QD L D + EL EDD S+ QE N+ + +++ + + LLSG D Sbjct: 6 SVLQQQQDWRKTLEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRWELQQLLSGPYD 65 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + A L ++AGAGGT++QDWA MLLRMYTRW E + +K E+ +G+EAGIKSATL ++ Sbjct: 66 RSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSATLEME 125 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDT 232 GP AYG+LK E+G HRLVRISP+++N +R TSF+ + + P++D+ +I ++I E D I T Sbjct: 126 GPYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDLEITT 185 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RA G GGQ+VN ++AVRI HIPTG+ V+C QERSQ +N+ +A +L+AKL + ++R Sbjct: 186 SRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVAQEQR 245 Query: 293 -EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + IA I E WG QIR+YV PYQMVKDLRT E T+ +DV++G+LD F++A L Sbjct: 246 AQAIAEI-RGDLVEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQAYL 304 >gi|78213950|ref|YP_382729.1| peptide chain release factor 2 [Synechococcus sp. CC9605] gi|78198409|gb|ABB36174.1| peptide chain release factor 2 [Synechococcus sp. CC9605] Length = 356 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 153/334 (45%), Positives = 211/334 (63%), Gaps = 9/334 (2%) Query: 26 LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 LN + +D P W + A+ MR + +S + + + D LEL Sbjct: 11 LNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLGGWRGAVDDAQATLELYEL 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D +LQE + L +++ ++ + E LLSGE D A L ++AGAGGT++QDWA MLL Sbjct: 71 EPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 130 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRLVRISP+++ Sbjct: 131 RMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVRISPFNA 190 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++AVRI HIPTG Sbjct: 191 NDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTG 250 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317 + V+C QERSQ +NK +A +L AKL + ++R EIA+I E WG QIR+YV Sbjct: 251 LFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 309 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QPYQMVKDLRTN E V+DG LD F+ A+L Sbjct: 310 QPYQMVKDLRTNEETNDVQAVMDGALDPFIDASL 343 >gi|282898121|ref|ZP_06306116.1| Peptide chain release factor 2 [Raphidiopsis brookii D9] gi|281197265|gb|EFA72166.1| Peptide chain release factor 2 [Raphidiopsis brookii D9] Length = 290 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 143/281 (50%), Positives = 195/281 (69%), Gaps = 5/281 (1%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLEL E D +LQE + ++ +++ + + LLSG DS A L ++AGAGGT++Q Sbjct: 3 LLEL---EADEGLLQEAETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQ 59 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA ML+RMYTRWAE +K E +G+EAGIKSATL I G AYG+L+ E G HRLV Sbjct: 60 DWAFMLMRMYTRWAEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLV 119 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+++N +R TSF+ + V P +D+S+ +EI E D + T RA G GGQ+VN ++AVR Sbjct: 120 RISPFNANGKRQTSFAGVEVMPQIDNSVTLEIPEKDLEVTTSRAGGKGGQNVNKVETAVR 179 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310 I HIPTG+ V+C +ERSQ +NK +A L+AKL + ++R +EIA I E WG Sbjct: 180 IVHIPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEI-RGDMVEASWGN 238 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQ+VKDLRTN+E T+ DV++GDLD+F++A L Sbjct: 239 QIRNYVFHPYQIVKDLRTNLETTAIIDVMNGDLDNFIQAYL 279 >gi|309791264|ref|ZP_07685795.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6] gi|308226690|gb|EFO80387.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6] Length = 361 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 146/348 (41%), Positives = 220/348 (63%), Gaps = 2/348 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 R L GG+FD +++S L + +P LW + A+ +M++ L + ++ ++ Sbjct: 9 RVLPPSGGIFDLATKQEQISSLEERAAEPDLWNDPRTAQGVMQQLTRLKDEVAQWTNLES 68 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 +L L++L E D ++ E + ++ + E+ ++ LLSG D DA++ + AG Sbjct: 69 QLISLDELIDLTEAEGDATLYTEIAAEVRAAQKELAQRELALLLSGPYDDRDAFVSIQAG 128 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GGT++QDWA+M+LRMY RWAE R + +++ G+EAGIKSATL ++GP AYG ++ E Sbjct: 129 MGGTDAQDWADMMLRMYLRWAETRGYSVTIVDMSAGDEAGIKSATLELRGPYAYGNIRAE 188 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRL+R+SP+++ R TSF+ + V P VDD+ E+ I D RID +R+ G GGQ VN Sbjct: 189 AGVHRLIRLSPFNAAHTRQTSFARVEVVPEVDDAPEVTIKPEDLRIDVFRSGGHGGQGVN 248 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSK 303 TTDSAVR+TH+PTG+VV CQ ERSQ +N+ A +LR +L E ELQ++ EE A + Sbjct: 249 TTDSAVRLTHLPTGIVVTCQNERSQLQNRETAMRVLRGRLLERELQRQLEERARL-RGEH 307 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +G Q+R+Y L P +VKD RT E ++ VLDG LD F++A L Sbjct: 308 RDAAFGSQMRTYYLHPSTLVKDHRTEHETSNVYAVLDGQLDPFIEAYL 355 >gi|210631232|ref|ZP_03296815.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279] gi|210160119|gb|EEA91090.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279] Length = 376 Score = 285 bits (729), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 151/348 (43%), Positives = 208/348 (59%), Gaps = 3/348 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS +L + + A R++ L + P W + A+ M E + + + Sbjct: 17 LSARLTEVEAYLHIEEARGRVTELEEASAAPGFWDDAEAARAYMAELAQVKGDVGLVDRA 76 Query: 63 QDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +RL D LELA E +D + E + + + ++ + S +GE D A L Sbjct: 77 HERLSDARAALELADEMGQDGAEFIAEAAAAAEELTRAIDEMELSSWFTGEFDHGSAILS 136 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + G GG E+QDW ML +MY ++ +R +K + E GI AT+ ++G +A+G Sbjct: 137 IKPGQGGLEAQDWTFMLFKMYMKYFARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFGM 196 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHRLVRISP D+ RR T+F+ + V PV+ D IEIE++ D R+D Y ASG GG Sbjct: 197 LRAEAGVHRLVRISPTDAKKRRQTTFAGVEVIPVLPDDIEIEVAPDDIRVDVYHASGPGG 256 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA +L+A+LYELEL+KR E + Sbjct: 257 QGVNTTDSAVRVTHIPTGIVVTCQNERSQIQNKAACMQILKARLYELELEKRAETLDEIR 316 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347 KTEIG+G QIRSYVL PYQMVKDLR+ +E ++ VL DGDLD F+ Sbjct: 317 GPKTEIGFGNQIRSYVLYPYQMVKDLRSGVETSNVDSVLEDGDLDPFI 364 >gi|149371331|ref|ZP_01890817.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49] gi|149355469|gb|EDM44028.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49] Length = 317 Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 133/255 (52%), Positives = 187/255 (73%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E +F ++LS E D+ A L++ AGAGGTES DWANML+RMY WAE+ FK + L Sbjct: 52 IEALEFRNMLSEEGDAMSAVLQITAGAGGTESCDWANMLMRMYLMWAERNGFKVKELNYQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 G+ AGIK+ TL I G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+ Sbjct: 112 AGDVAGIKTVTLEIDGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDT 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEI+I+ +D D R+ GAGGQ+VN ++ +TH P+G+V+ + RSQ +N+ +A Sbjct: 172 IEIDINPADIGWDFARSGGAGGQNVNKVETKAILTHKPSGIVIHNSETRSQLENRQKAMQ 231 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 ML+++LYE+EL+K++ E +K I WG QIR+YVLQPY++VKD+R N E T+P + Sbjct: 232 MLKSQLYEIELRKQQAQRAEIEGNKMAIEWGSQIRNYVLQPYKLVKDVRNNHESTNPDAI 291 Query: 339 LDGDLDDFMKATLAI 353 LDG +D+F+KA L + Sbjct: 292 LDGHIDEFLKAYLMM 306 >gi|147669189|ref|YP_001214007.1| peptide chain release factor 2 [Dehalococcoides sp. BAV1] gi|146270137|gb|ABQ17129.1| bacterial peptide chain release factor 2 (bRF-2) [Dehalococcoides sp. BAV1] Length = 356 Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 14/354 (3%) Query: 7 LNCLGGLF----DWDNAVQRLSF--LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +N F D+D + + L L T + +P WQ+ A+ M++ + Sbjct: 1 MNLRAAFFLTWCDFDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWR 60 Query: 61 EIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 ++ R+ D L ELA L +D S+ E + + E++ + SG+ D+ +A L Sbjct: 61 GLERRIND---LTELAVLSREDPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALL 117 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 VHAGAGG ESQDWA MLLRM+ RWAEK+ F E L+ GEEAGIKSATL I+G AYG Sbjct: 118 TVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEILDQSPGEEAGIKSATLQIEGEYAYG 177 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E GVHRL+R+SP+D++ RHTSF+ + + P +DS++I+I D +ID +R+SG G Sbjct: 178 FLKSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPG 237 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI 298 GQ+V +AVR+THIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR EE A + Sbjct: 238 GQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKL 297 Query: 299 -GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GE E WG QIRSYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 298 KGERISAE--WGSQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYL 349 >gi|89898648|ref|YP_515758.1| peptide chain release factor 2 [Chlamydophila felis Fe/C-56] gi|89332020|dbj|BAE81613.1| hypothetical protein [Chlamydophila felis Fe/C-56] Length = 315 Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 142/251 (56%), Positives = 184/251 (73%), Gaps = 1/251 (0%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + + LLSGE D N +L ++AGAGGTES DW ML RMY RWA + ++K E ++ DG+ Sbjct: 59 EIQRLLSGEVDKNSCFLTINAGAGGTESCDWVEMLFRMYCRWASEHRWKVEVIDRQDGDV 118 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIK T+ G AYG+ K E+GVHRLVRISP++SN++RHTSF+S+ VYP +DD IEI+ Sbjct: 119 AGIKHVTVKFSGDYAYGYAKAERGVHRLVRISPFNSNAKRHTSFASVDVYPEIDDEIEID 178 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG+ V CQ ERSQ +N+ MLRA Sbjct: 179 IQPNDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGITVSCQNERSQLQNRESCMKMLRA 238 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 ++Y+ LQ+R E + +K EI WG QIR+YV QPY +VKD+RT E + ++DG+ Sbjct: 239 RMYQQILQERLEKQLLERKNKKEIAWGSQIRNYVFQPYTLVKDVRTGYETGNVQAMMDGE 298 Query: 343 -LDDFMKATLA 352 LDDF+KA LA Sbjct: 299 LLDDFVKAYLA 309 >gi|126664153|ref|ZP_01735146.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38] gi|126623867|gb|EAZ94562.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38] Length = 285 Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 131/268 (48%), Positives = 195/268 (72%) Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E Q +E +F ++LS E DS A L++ AGAGGTES DWA+ML+RMY W Sbjct: 12 EEVETQYQHTLSHIEDLEFRNMLSDEGDSMSAVLQITAGAGGTESCDWASMLMRMYLMWG 71 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK+ +K + L +GE AGIK+ TL +G A+G+LKGE GVHRLVRISP+DSN++RHTS Sbjct: 72 EKQGYKIKELNFQEGEVAGIKTVTLEFEGDFAFGYLKGENGVHRLVRISPFDSNAKRHTS 131 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S++VYP+VDD+IEI+I+ +D I T R+SGAGGQ+VN ++ V++ H PTG+ +QC + Sbjct: 132 FASVYVYPLVDDTIEIDINPADIEIITSRSSGAGGQNVNKVETKVQLFHKPTGIQIQCSE 191 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 RSQ N+ +A ML+++LYE+EL+K++ + E+ K +I WG QIR+YV+ PY++VKD Sbjct: 192 TRSQQDNRQRAMQMLKSQLYEIELKKQQAQRSDIEAGKMKIEWGSQIRNYVMHPYKLVKD 251 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +R+ E + +++G++D+F+KA L + Sbjct: 252 VRSGHESSDVEGIMNGEIDNFLKAYLMM 279 >gi|145220477|ref|YP_001131186.1| peptide chain release factor 2 [Prosthecochloris vibrioformis DSM 265] gi|145206641|gb|ABP37684.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium phaeovibrioides DSM 265] Length = 300 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 139/280 (49%), Positives = 194/280 (69%), Gaps = 1/280 (0%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L LA E + S +E ++ I+ E++ +F ++LSG+ D +A + +HAGAGGTE+QD Sbjct: 18 LTLADELGEESYAEELDASIAAIEAEMDAIEFRNMLSGKDDEGNAIITIHAGAGGTEAQD 77 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML RMY RWAE++ FK + G+ AGIK+ATL I+GP AYG+LK E GVHRLVR Sbjct: 78 WAEMLYRMYMRWAERKGFKIYTDDYQAGDGAGIKTATLEIQGPYAYGYLKAENGVHRLVR 137 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +SP+DSN+RRHTSF+S++ YP +EIE+ + D + T+R+ G GGQ+VN ++AVRI Sbjct: 138 VSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVETAVRI 197 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 H+P+G+VV CQQERSQ +N+ +A ML A+LY+ + ++ + E K +I WG QI Sbjct: 198 KHVPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDAKKREVEGKKKKIEWGSQI 257 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 RSYVL + +KD RTN E+ VLDGD+DDFM A L+ Sbjct: 258 RSYVLDD-RRIKDHRTNHERFDIETVLDGDIDDFMHAYLS 296 >gi|284053267|ref|ZP_06383477.1| peptide chain release factor 2 [Arthrospira platensis str. Paraca] Length = 309 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 142/288 (49%), Positives = 200/288 (69%), Gaps = 3/288 (1%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D + EL EDD S+ QE N+ + +++ + + LLSG D + A L ++AGA Sbjct: 11 LEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRWELQQLLSGPYDRSGAVLTINAGA 70 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGT++QDWA MLLRMYTRW E + +K E+ +G+EAGIKSATL ++GP AYG+LK E+ Sbjct: 71 GGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSATLEMEGPYAYGYLKAEK 130 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVN 244 G HRLVRISP+++N +R TSF+ + + P++D+ +I ++I E D I T RA G GGQ+VN Sbjct: 131 GTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVN 190 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSK 303 ++AVRI HIPTG+ V+C QERSQ +N+ +A +L+AKL + ++R + IA I Sbjct: 191 KVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIAEI-RGDL 249 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E WG QIR+YV PYQMVKDLRT E T+ +DV++G+LD F++A L Sbjct: 250 VEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQAYL 297 >gi|227497420|ref|ZP_03927652.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM 15434] gi|226833096|gb|EEH65479.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM 15434] Length = 374 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 147/338 (43%), Positives = 216/338 (63%), Gaps = 6/338 (1%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-- 79 R++ L+ + P LW + A+++ H + ++++ R+ D ++E+A EE Sbjct: 31 RIAELSEQAAAPDLWDDPDAAQVVTSNLSHAQADLKRVEDLGSRIDDLEAMVEMAGEEEG 90 Query: 80 -DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D +L E +L I ++ + +LLSGE D DA + + +GAGG ++ D+A MLL Sbjct: 91 DDAAELLAEAESDLASISKDLSELEIRTLLSGEYDQRDAVVTIRSGAGGVDAADFAEMLL 150 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RWAE+ + T+ L+ EEAG+KS T + P AYG L E G HRLVRISP+D+ Sbjct: 151 RMYLRWAERHGYATKVLDTSYAEEAGLKSVTFEVHAPYAYGTLSVEGGTHRLVRISPFDN 210 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RR TSF+++ V P+++ + IE+ E+D RID +R+SG GGQ VNTTDSAVRITH+PTG Sbjct: 211 QGRRQTSFAAVEVIPLIESTDHIEVPETDIRIDVFRSSGPGGQSVNTTDSAVRITHLPTG 270 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVL 317 +VV Q E+SQ +N+A A +L+++L L L+++EE A E + + WG Q+RSYVL Sbjct: 271 LVVSMQDEKSQIQNRAAAMRVLQSRL--LLLKQQEEDAKKKELAGDVKASWGDQMRSYVL 328 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 PYQMVKDLRT+ E +P V DGD+D F+ A + +K Sbjct: 329 NPYQMVKDLRTSYEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|154507630|ref|ZP_02043272.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC 17982] gi|153797264|gb|EDN79684.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC 17982] Length = 373 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 144/336 (42%), Positives = 218/336 (64%), Gaps = 11/336 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD--CS 83 LN K P LW + A+ + H + + I ++ +R+ D ++++A E+ D Sbjct: 35 LNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQMSERIDDLEAMVDMAAEDPDEGAD 94 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 IL E +L++++ ++ + +LL GE D +A + + +GAGG ++ D+A +LLRMY R Sbjct: 95 ILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFAEILLRMYLR 154 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE+ + T+ ++ EEAG+KSAT ++ P AYG L E G HRLVRISP+D+ RR Sbjct: 155 WAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRISPFDNQGRRQ 214 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+++ V P+++ + IEI ES+ ++D +R+SG GGQ VNTTDSAVR+THIPTG+VV Sbjct: 215 TSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTHIPTGIVVSM 274 Query: 264 QQERSQHKNKAQAWNMLRAKL----YELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q E+SQ +N+A A +L+++L +E E K++E+A ++S WG Q+RSYVLQP Sbjct: 275 QDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGDVKAS-----WGDQMRSYVLQP 329 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 YQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 330 YQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365 >gi|328773067|gb|EGF83104.1| hypothetical protein BATDEDRAFT_85755 [Batrachochytrium dendrobatidis JAM81] Length = 367 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 156/368 (42%), Positives = 231/368 (62%), Gaps = 24/368 (6%) Query: 1 MKLSRQLNCLGGLF-------DWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHL 52 M LS+ N + LF +W+ + S L + +D +LW + EA + ++ L Sbjct: 1 MTLSK--NNISKLFKTIDEKKNWEVVESKASDLRDRLKDDNLWTTDTKEAIEIQKDISRL 58 Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 ++ I+ + + + ++ELA EE D ++L+E +++ ++ ++ +SL++ E Sbjct: 59 ESEIAEHSKFTVKWNETQSMIELAKEEGDDTLLKEVVADMEDLEAQLRQYFIKSLMTDEV 118 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + Y+E+ AGAGG ES DW +ML RMY RW + ++ G+ AG+KS+T I Sbjct: 119 DQSGCYIEIRAGAGGAESCDWVSMLTRMYERWGADQGHTVTSIAQVKGDVAGLKSSTTQI 178 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS----IEIEISESDC 228 +G AYGW K E GVHR VR+SP+DSN++RHTSF S+ V P++ S IEIS ++ Sbjct: 179 QGDYAYGWSKNESGVHRFVRVSPFDSNAKRHTSFVSVQVLPILSTSRLSTKTIEISTNEL 238 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 +++ RA GAGGQHVN T+SAVR+THIPTG+ V CQ ERSQ +NKA A ML++KLY++E Sbjct: 239 KLEFMRAQGAGGQHVNKTESAVRMTHIPTGITVFCQSERSQVQNKATALEMLKSKLYQVE 298 Query: 289 L-----QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L QK+E AN+GE++ WG IRSYVLQPYQ+VKD RT + T+ DVL+G L Sbjct: 299 LDKLSRQKQEHHANLGENA-----WGNHIRSYVLQPYQLVKDTRTGTQTTNVQDVLNGGL 353 Query: 344 DDFMKATL 351 +FM++ L Sbjct: 354 QEFMESAL 361 >gi|320095989|ref|ZP_08027602.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977060|gb|EFW08790.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178 str. F0338] Length = 372 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 146/340 (42%), Positives = 220/340 (64%), Gaps = 11/340 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 +++ LN K P LW + A+ + H + + + + +R+ D ++E+A E+ D Sbjct: 31 QIAELNEKAAAPDLWDDPARAQEVTSALSHRQSELDRVVRMGERIDDLEAMVEMAGEDPD 90 Query: 82 CS--ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + IL E + +L +K +V + +LL GE D +A + + +GAGG ++ D+A +LLR Sbjct: 91 EAEEILDEAAADLDTLKKDVSDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFAEILLR 150 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY RWAE+ + T+ ++ EEAG+KSAT ++ P AYG L E G HRLVRISP+D+ Sbjct: 151 MYLRWAERHGYATKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRISPFDNQ 210 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GGQ VNTTDSAVR+THIPTG+ Sbjct: 211 GRRQTSFAAVEVIPLIESTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTHIPTGI 270 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKL----YELELQKREEIANIGESSKTEIGWGRQIRSY 315 VV Q E+SQ +N+A A +L+++L +E E K++E+A ++S WG Q+RSY Sbjct: 271 VVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGDVKAS-----WGDQMRSY 325 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 VLQPYQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 326 VLQPYQMVKDLRTEFESGNPQAVFDGDIDGFINAGIRWRK 365 >gi|218885659|ref|YP_002434980.1| peptide chain release factor 2 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|65736690|dbj|BAD98502.1| peptide release factor 2 [Desulfovibrio vulgaris] gi|218756613|gb|ACL07512.1| Peptide chain release factor 2 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 376 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 159/353 (45%), Positives = 218/353 (61%), Gaps = 9/353 (2%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 Q L G D RL + + P W N + +++E+ L+ I+ ++ ++ Sbjct: 17 QYASLWGRLDLAGNRNRLDEIERQLSSPDAWNNPEKLTPVLQEKSQLEGEITRLERLET- 75 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ-------FESLLSGEADSNDAY 118 C + L L E++ + + + L+ + +V Q LLSG+ D A Sbjct: 76 -CRRDVTEWLTLAEEEEAAGEPGQEALESLAEQVTVLQNLLQETEMNMLLSGKEDRMPAI 134 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+H GAGGTE+QDWA ML+RMY RWA+ K E L+ G+EAG+KS TL + GPNAY Sbjct: 135 VEIHPGAGGTEAQDWAEMLVRMYLRWADTHDMKAEYLDYLAGDEAGVKSVTLRMAGPNAY 194 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P V I ++I E+D RID +R+SG Sbjct: 195 GLLKGEKGIHRLIRISPFDSSGRRHTSFASVDVIPDVGQEITVDIKETDLRIDIFRSSGP 254 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTT SAVRITH+PTG+ QCQ E+SQH N+ A +LRA+LYELEL+K EE Sbjct: 255 GGQSVNTTSSAVRITHLPTGISAQCQNEKSQHSNRDTAMQILRARLYELELRKLEEEKKA 314 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K IG+G QIR+Y LQPY++VKD RTN E VLDG +D ++ L Sbjct: 315 QYAGKDAIGFGSQIRTYTLQPYRLVKDHRTNTEIGDVEAVLDGRIDQLLRDYL 367 >gi|113953765|ref|YP_731847.1| peptide chain release factor 2 [Synechococcus sp. CC9311] gi|113881116|gb|ABI46074.1| peptide chain release factor 2, programmed frameshift [Synechococcus sp. CC9311] Length = 375 Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 150/334 (44%), Positives = 210/334 (62%), Gaps = 9/334 (2%) Query: 26 LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 LN K +D P W + A+ MR + + + + + + D LEL Sbjct: 30 LNAKQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLVDWRGAIDDGQATLELHEL 89 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D +L E L +++ ++ + E LLSGE D A L ++AGAGGT++QDWA MLL Sbjct: 90 EPDEDLLGEAQQGLNQLRQALDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 149 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE + E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRLVRISP+++ Sbjct: 150 RMYTRWAEDQGMSVSVNELSEGEEAGIKSTTIEIEGRYAYGYLRNEKGTHRLVRISPFNA 209 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+ + V P +D+ +E++I E D + T R+ GAGGQ+VN ++AVRI H+PTG Sbjct: 210 NDKRQTSFAGVEVMPKLDEEVELDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTG 269 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317 + V+C QERSQ +NK +A +L+AKL + ++R EIA+I E WG QIR+YV Sbjct: 270 LAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 328 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PYQMVKDLRT E T V+DGDL+ F++A L Sbjct: 329 HPYQMVKDLRTQEETTDVQGVMDGDLNPFIQALL 362 >gi|78188007|ref|YP_378345.1| peptide chain release factor 2 [Chlorobium chlorochromatii CaD3] gi|78170206|gb|ABB27302.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium chlorochromatii CaD3] Length = 312 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 136/280 (48%), Positives = 196/280 (70%), Gaps = 1/280 (0%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +++ALE D S E ++ + ++ + +F ++LSG+ D+ +A + +HAGAGGTE+QD Sbjct: 29 MDIALELQDESFGDELTNTITELEQAIAAIEFRNMLSGKDDAGNAMVTIHAGAGGTEAQD 88 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML RMY RWAE++ FKT + +G+ AGIK+ATL I+G AYG+LK E GVHRLVR Sbjct: 89 WAEMLYRMYMRWAERKGFKTFTDDYQEGDGAGIKTATLEIQGAYAYGYLKAENGVHRLVR 148 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +SP+D+N+RRHTSF+S++ YP +EIE+ + D + T+R+ G GGQ+VN ++AVRI Sbjct: 149 VSPFDANARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVETAVRI 208 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 H+PTG+VV CQ+ERSQ +N+ +A ML A+LY+ + ++ + E K +I WG QI Sbjct: 209 KHLPTGIVVGCQEERSQLQNRERAMKMLMAQLYQRQREEEDAKKREIEGKKKKIEWGSQI 268 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 RSYVL + +KD RTN E+ VLDGDLDDFM+ L+ Sbjct: 269 RSYVLDD-RRIKDHRTNYERFDIETVLDGDLDDFMEKYLS 307 >gi|87123562|ref|ZP_01079413.1| Peptide chain release factor 2 [Synechococcus sp. RS9917] gi|86169282|gb|EAQ70538.1| Peptide chain release factor 2 [Synechococcus sp. RS9917] Length = 356 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 152/340 (44%), Positives = 210/340 (61%), Gaps = 2/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD R L P W + A+ MR + + +++ + + D Sbjct: 5 VFDVPALKARQQDLEQLASQPDFWDDQPNAQKQMRRLDEVKAQLQQLEQWRGAIDDAQAT 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LEL E D +L E + L ++ ++ + E LLSGE D A L ++AGAGGT++QD Sbjct: 65 LELYDLEPDDDMLSEAQEGLTTLRHALDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRWAE K E+ +GEEAGIKSAT+ I G AYG+L+ E+G HRLVR Sbjct: 125 WAQMLLRMYTRWAEDHGMKVSVDELSEGEEAGIKSATIEIDGRYAYGYLRNEKGTHRLVR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V P ++D ++I+I + D + T R+ GAGGQ+VN ++AVRI Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLEDEVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R EIA+I E WG Q Sbjct: 245 LHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQ 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PYQMVKDLRT E T V+DG LD F++A L Sbjct: 304 IRNYVFHPYQMVKDLRTQEETTDVQGVMDGHLDPFIQALL 343 >gi|317124427|ref|YP_004098539.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium calvum DSM 43043] gi|315588515|gb|ADU47812.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium calvum DSM 43043] Length = 370 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 143/351 (40%), Positives = 222/351 (63%), Gaps = 5/351 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + G+ D D +++ L + +P+LW + +A+ + + + + Sbjct: 12 LRATMDSVRGVTDLDVLAKQIVELERQASEPNLWDDQDKAQQVTSALSRANAERDRVLSM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D L+E+A EE D + E +L +IK ++ + +LLSGE D +A + + Sbjct: 72 DSRINDLETLVEMATEESDQDTMDEALRDLAKIKKDLGELEVRTLLSGEYDEREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T+ ++ EEAG+KSAT + P A+G L Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVNVPYAFGHLN 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ IEI E++ +ID +R+SG GGQ Sbjct: 192 VEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESDDSIEIPENELKIDVFRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L LQ++ E A + + Sbjct: 252 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLL---LQRKAEEAAVKKEM 308 Query: 303 KTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ WG Q+RSYVL PYQMVKDLRT+ E +P+ V DGD+D F++A + Sbjct: 309 AGDVKASWGDQMRSYVLNPYQMVKDLRTDFETGNPAAVFDGDIDGFIEAGI 359 >gi|283769449|ref|ZP_06342347.1| peptide chain release factor 2 [Bulleidia extructa W1219] gi|283103974|gb|EFC05359.1| peptide chain release factor 2 [Bulleidia extructa W1219] Length = 346 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 150/345 (43%), Positives = 221/345 (64%), Gaps = 14/345 (4%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNL 70 FD D Q + N W + +A+ +++E L + + + + E L ++ Sbjct: 5 FDLDQKKQEIQKNNDLMAQEDFWNDQKKAQKIIKENNSLKDLVDQHTKLYETTLDLLASV 64 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGT 128 L+ +L+ED +++E + ++ + +Y FE LLSG D ++A LE+H GAGGT Sbjct: 65 TELQSSLDEDMKELVEE-----EYVQYDQDYALFEVRVLLSGPYDDHNAILEIHPGAGGT 119 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ DWA ML RMYTR+AE++ + + L+ GEEAG+KS ++ + G AYG+LK E GVH Sbjct: 120 EAMDWAGMLYRMYTRFAERKGYHLDVLDYQPGEEAGVKSVSMRVSGNMAYGYLKAENGVH 179 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DSN+RRHTSF+S+ + P +D +EIEI + D + T R+SGAGGQH+N TDS Sbjct: 180 RLVRISPFDSNARRHTSFASVEIMPEFEDDLEIEIEDKDLDVITMRSSGAGGQHINKTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN--IGESSKTEI 306 AVR+TH PTG+ V Q +RSQ +N+ NML++KL +L+++++E+ A+ GE E Sbjct: 240 AVRMTHKPTGITVFSQSQRSQLQNRETCLNMLKSKLLQLKIREQEQRASEIKGEVKANE- 298 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV PY MVKDLRT E + V+DGD++ F+ + L Sbjct: 299 -WGSQIRSYVFAPYTMVKDLRTGYEVGNVQSVMDGDIEGFIDSYL 342 >gi|170782441|ref|YP_001710774.1| chain release factor 2 [Clavibacter michiganensis subsp. sepedonicus] gi|169157010|emb|CAQ02182.1| chain release factor 2 [Clavibacter michiganensis subsp. sepedonicus] Length = 367 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 149/336 (44%), Positives = 216/336 (64%), Gaps = 5/336 (1%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q + L+ + +P LW + +A+ + + H + + I E+Q RL D +L+E+A +D Sbjct: 31 QEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDELQRRLDDLDVLVEMA--KD 88 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D +E L I ++ + ++LL+GE D A + + AGAGG ++ D+A ML+RM Sbjct: 89 DEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTIRAGAGGVDAADFAEMLMRM 148 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE+ + L+ EEAGIKSAT I P A+G L E G HRLVR+SP++S Sbjct: 149 YLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTLSVEAGTHRLVRMSPFNSAG 208 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +R TSF+++ V P+++ + IEI E+D R+D +R+SG GGQ VNTTDSAVRITH+PTG+V Sbjct: 209 KRQTSFAAVEVVPLIEQTESIEIPENDMRVDVFRSSGPGGQSVNTTDSAVRITHLPTGIV 268 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQP 319 V CQ E+SQ +N+A A +L+++L L +Q+ +E A E + WG Q+RSYVL P Sbjct: 269 VTCQNEKSQIQNRAAALRVLQSRL--LLVQREQEAATKKELAGNITASWGDQMRSYVLAP 326 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 YQMVKDLRT E +PS+V DGDLD F+ A + +K Sbjct: 327 YQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRK 362 >gi|16331171|ref|NP_441899.1| peptide chain release factor 2 [Synechocystis sp. PCC 6803] gi|1653665|dbj|BAA18577.1| peptide chain release factor [Synechocystis sp. PCC 6803] Length = 288 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 143/282 (50%), Positives = 200/282 (70%), Gaps = 6/282 (2%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLEL EDD ++L E L++++ E++ + + LLSG D+ A L ++AGAGGT++Q Sbjct: 3 LLEL---EDDQALLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQ 59 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMYTRW+EK+ +K EI +G+EAG+KS TL I+G AYG+LK E+G HRLV Sbjct: 60 DWAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLV 119 Query: 192 RISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RISP+++N +R TSF+ + V P++ +++I ++I + D I T RA G GGQ+VN ++AV Sbjct: 120 RISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAV 179 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGWG 309 RI H+PTG+ V+C QERSQ +NK +A +L+AKL LE Q+ + IA I E WG Sbjct: 180 RIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEI-RGDMVEAAWG 238 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQ+VKDLRTN+E T V+DG+L DF++A L Sbjct: 239 TQIRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYL 280 >gi|325963891|ref|YP_004241797.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter phenanthrenivorans Sphe3] gi|323469978|gb|ADX73663.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter phenanthrenivorans Sphe3] Length = 371 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 140/326 (42%), Positives = 211/326 (64%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ + +P LW + A+ + H + + + + R+ D +L+EL +EDD + + Sbjct: 36 LSERAGEPDLWDDPSAAQKITSRLSHRQSELERLNNLASRIDDLEVLVELGQDEDDAASM 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L+ IK ++ + +LLSGE D +A + + AGAGG ++ D+A ML+RMY RWA Sbjct: 96 GEAAAELESIKKALKELEVVTLLSGEYDEREAVVSIRAGAGGVDAADFAEMLMRMYLRWA 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ + T ++ EEAG+KSAT +K P AYG L E G HRLVRISP+D+ RR TS Sbjct: 156 ERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P+++ + IEI +++ R+D +R+SG GGQ VNTTDSAVR+THIPTG VV Q Sbjct: 216 FAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQSVNTTDSAVRLTHIPTGTVVSMQN 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 E+SQ +N+A A +L+++L L+ +++E+ + + WG Q+RSYVL PYQMVKD Sbjct: 276 EKSQLQNRAAAMRVLQSRLLLLK-KEQEDAEKKALAGDVKASWGDQMRSYVLNPYQMVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT E + S V DG++DDF+ A + Sbjct: 335 LRTEHEVGNTSAVFDGEIDDFIDAGI 360 >gi|73748409|ref|YP_307648.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1] gi|73660125|emb|CAI82732.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1] Length = 356 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 158/354 (44%), Positives = 220/354 (62%), Gaps = 14/354 (3%) Query: 7 LNCLGGLF----DWDNAVQRLSF--LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +N F D+D + + L L T + +P WQ+ A+ M++ + Sbjct: 1 MNLRAAFFLTWCDFDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWR 60 Query: 61 EIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 ++ R+ D L ELA L +D S+ E + + E++ + SG+ D+ +A L Sbjct: 61 GLERRIND---LTELAVLSREDPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALL 117 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 VHAGAGG ESQDWA MLLRM+ RWAEK+ F E L+ GEEAGIKSATL I+G AYG Sbjct: 118 TVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYG 177 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E GVHRL+R+SP+D++ RHTSF+ + + P +DS++I+I D +ID +R+SG G Sbjct: 178 FLKSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPG 237 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI 298 GQ+V +AVR+THIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR EE A + Sbjct: 238 GQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKL 297 Query: 299 -GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GE E WG QIRSYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 298 KGERISAE--WGSQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYL 349 >gi|260436566|ref|ZP_05790536.1| peptide chain release factor 2 [Synechococcus sp. WH 8109] gi|260414440|gb|EEX07736.1| peptide chain release factor 2 [Synechococcus sp. WH 8109] Length = 356 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 152/334 (45%), Positives = 210/334 (62%), Gaps = 9/334 (2%) Query: 26 LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 LN + +D P W + A+ MR + +S + + + D LEL Sbjct: 11 LNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLAGWRGAVDDAQATLELYEL 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + D +LQE + L +++ ++ + E LLSGE D A L ++AGAGGT++QDWA MLL Sbjct: 71 DPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 130 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRLVRISP+++ Sbjct: 131 RMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVRISPFNA 190 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++AVRI HIPTG Sbjct: 191 NDKRQTSFAGVEVMPKIEEDVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTG 250 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317 + V+C QERSQ +NK +A +L AKL + ++R EIA+I E WG QIR+YV Sbjct: 251 LFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 309 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QPYQMVKDLRTN E V+DG LD F+ A L Sbjct: 310 QPYQMVKDLRTNEETNDVQAVMDGALDPFIDACL 343 >gi|83814103|ref|YP_445897.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855] gi|83755497|gb|ABC43610.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855] Length = 378 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 153/357 (42%), Positives = 226/357 (63%), Gaps = 8/357 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ ++ LGG D D + LN + DP W + A+ + + + I ++ Sbjct: 11 QLAERVEALGGYLDVDGRRMTVEELNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWED 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++++ +++ L+L EE+ + E ++++ +++ + ESLL D DA +E+ Sbjct: 71 VKEQ-AEDIETLQLLSEEEGEDMSDEIDAEARKLEQKLDRLELESLLDDPDDERDAIVEI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + GAGGTESQDWA MLLRMY RWAE + + E + GEEAGIKSATL ++G +AYG L Sbjct: 130 NPGAGGTESQDWAEMLLRMYMRWAEDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D++SRRHTSF+S++VYP VDDSI +++SE + + T+R+ G GGQ Sbjct: 190 KSETGVHRLVRISPFDADSRRHTSFASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQ 249 Query: 242 HVNTTDSAVRITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 HVN ++ VR+ T V C QERSQH+N+ +A ML++++Y+ E + +EE Sbjct: 250 HVNKVETGVRLIWTGTLSNGEETTVRAACTQERSQHQNRRRAREMLKSRIYQAERELKEE 309 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ESSK I WG QIRSYVL PY+MV D RT+ ++ VL+G+LD F+KA L Sbjct: 310 EKERLESSKKSIEWGSQIRSYVLHPYKMVNDHRTDTKRNDAEAVLEGELDPFIKAYL 366 >gi|119952877|ref|YP_945086.1| peptide chain release factor 2 [Borrelia turicatae 91E135] gi|119861648|gb|AAX17416.1| bacterial peptide chain release factor 2 [Borrelia turicatae 91E135] Length = 353 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 152/356 (42%), Positives = 225/356 (63%), Gaps = 8/356 (2%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M +L GG FD + +L + D + W + +A+ +++ + L I + Sbjct: 1 MNFWNKLKMSGGSFDSNKIKVKLKEYEKQINDENFWNDNKKAQEILKNQNILKAKIEPWE 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAY 118 ++ +L D L E+A E+D ++L + + KL +YK +L + D N+A+ Sbjct: 61 DLICKLKDLRELCEIAESEEDTALLDQDIN-----KLREQYKHLLTLSYFKEDIDINNAF 115 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L +H+GAGGTE+ DW +ML R+Y R++E+ +KTE +++ + E GIKS T+ IKG AY Sbjct: 116 LTIHSGAGGTEACDWVSMLYRIYLRYSERHGYKTELIDLLEAE-GGIKSVTIEIKGEYAY 174 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+LK E G+HRLVRISP+D+ +RHTSF+S+++ PV+DD IEI I D R+DTYRASGA Sbjct: 175 GFLKSEVGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEITIKPEDIRVDTYRASGA 234 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T SAVRITH+ TG+V Q Q +RSQH+NK A +L++KLYE ++ + Sbjct: 235 GGQHVNKTSSAVRITHLQTGIVTQSQTDRSQHRNKDLAMRVLKSKLYEHYKILEQQKSKS 294 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + K +I WG QIRSY+ QPY +VKD RT E + V+DG++D+F++ L K Sbjct: 295 KQEEKKDISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350 >gi|89890713|ref|ZP_01202222.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium BBFL7] gi|89516858|gb|EAS19516.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium BBFL7] Length = 386 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 215/329 (65%), Gaps = 2/329 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ L KT P W + A+++M+E ++ + D +L E +E D Sbjct: 48 ITNLEEKTFSPDFWNDAKAAELIMKELRNKKQWTTDYATATTLAEDTEVLYEF-FKEGDA 106 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S + + + + E +F+++LS E D A L++ AGAGGTES DWA ML+RMY Sbjct: 107 SEDEVMAKYNAAVDI-TEKLEFKNMLSNEGDDMSAVLQITAGAGGTESCDWAEMLMRMYM 165 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 WA+K +K + L G+ AGIK+ TL I+G ++GWLKGE GVHRLVRISP+DSN++R Sbjct: 166 MWAQKNNYKVKELNFQAGDVAGIKTVTLEIEGDYSFGWLKGENGVHRLVRISPFDSNAKR 225 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S++VYP+ DD+IEI+I+ +D + D R+SGAGGQ+VN ++ +TH P+G+V+ Sbjct: 226 HTSFASVYVYPLADDTIEIDINPADIKWDFARSSGAGGQNVNKVETKAILTHHPSGIVIH 285 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 + RSQ +N+ +A ML+++L+E+ELQKR + ES K +I WG QIR+YV+ PY++ Sbjct: 286 NSETRSQLENREKAMQMLKSQLFEIELQKRNAARDEIESGKMKIEWGSQIRNYVMHPYKL 345 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD+RT E + V++GD+D F+KA L Sbjct: 346 VKDVRTAHETGNVDAVMNGDIDAFLKAFL 374 >gi|224543374|ref|ZP_03683913.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM 15897] gi|224523701|gb|EEF92806.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM 15897] Length = 371 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 154/337 (45%), Positives = 206/337 (61%), Gaps = 22/337 (6%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE--DDCS 83 L +T D H W + + H + + E++ ++ D LE + +E + Sbjct: 36 LTVQTMDEHFWDD----------QAHATKVYAHLNEMK-KVADTDASLEASYKELMEVYE 84 Query: 84 ILQETSDNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++T D LE +Y F L E D ++A +E+H GAGGTESQDWA Sbjct: 85 YVKDTEDPDFMASLEEDYMTFHKNLDEFEKTLLFDQEYDHSNAIVEIHPGAGGTESQDWA 144 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML+RMY R+ EK+ +K + + G+EAG+KS ++ G NAYG L+ E+GVHRLVRIS Sbjct: 145 EMLMRMYIRYGEKKGWKVDVDDYLAGDEAGLKSCSIRFTGYNAYGHLRAEKGVHRLVRIS 204 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS+ RRHTSF+S+ V P +DD IEI I + RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 205 PFDSSKRRHTSFASVEVSPELDDDIEITIDPKNLRIDTYRASGAGGQHINKTDSAVRITH 264 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPT VV CQ +RSQ +N+ QA ML++KLY L ++ E + + K I WG QIRS Sbjct: 265 IPTNTVVSCQSQRSQLQNREQAMLMLKSKLYLLMQEEHAEKLSEIQGEKKNIEWGSQIRS 324 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL PY MVKD R+ E +LDG+LDD + A L Sbjct: 325 YVLHPYSMVKDNRSGYESNDQKKILDGELDDLIYAYL 361 >gi|169838345|ref|ZP_02871533.1| Protein chain release factor B [candidate division TM7 single-cell isolate TM7a] Length = 243 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 144/241 (59%), Positives = 183/241 (75%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N+A L +++GAGGTE+ DWA ML RMY RWA + FK E L+ GEEAGIKS TL IKG Sbjct: 2 NNAILTINSGAGGTEACDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIKG 61 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 AYG+LKGE+GVHRLVRISP+DSN+RRHTSF+++ V P ++D ++I+I D ++DTYR Sbjct: 62 NYAYGYLKGEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVKIDIRPEDLKVDTYR 121 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVNTTDSAVRITHIPT VV CQ ERSQ KN+ A +L++KL+ELEL+KRE+ Sbjct: 122 ASGAGGQHVNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREK 181 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + ++++I WG QIRSYV QPY+MVKD RT E+ + V+DGD+D F+ L Sbjct: 182 EMAELKGTESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYA 241 Query: 355 K 355 K Sbjct: 242 K 242 >gi|88856358|ref|ZP_01131017.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1] gi|88814442|gb|EAR24305.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1] Length = 368 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 148/347 (42%), Positives = 213/347 (61%), Gaps = 9/347 (2%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + D D ++ L+ P LW + +A+ + + H ++ I I +RL D I+ Sbjct: 23 VVDTDRLTSEIARLSEAAGAPDLWDDTDKAQKVTSDLSHRQAELAKINSISNRLDDLEIM 82 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++LA EE D + L IK + + ++LL+GE D A + + AGAGG ++ D Sbjct: 83 VQLANEESDAQAGADARAELTGIKKTLGDLEVQTLLNGEFDQRPAVITIRAGAGGVDAAD 142 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A MLLRMY R+AE+ + T L+ EEAGIKSAT + P A+G L E G HRLVR Sbjct: 143 FAEMLLRMYLRYAEQHSYPTRVLDTSYAEEAGIKSATFEVDAPFAFGTLSVEAGTHRLVR 202 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +SP++S +R TSF+++ V P+++ + +E+ E+D R+D +R+SG GGQ VNTTDSAVRI Sbjct: 203 MSPFNSAGKRQTSFAAVEVVPLIETTDVVEVPENDIRVDVFRSSGPGGQSVNTTDSAVRI 262 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNM----LRAKLYELELQKREEIANIGESSKTEIGW 308 TH+PTG+VV CQ E+SQ +N+A A + L E E ++EIA + +S W Sbjct: 263 THLPTGIVVSCQNEKSQIQNRAAAMRVLQSRLLLLQREQEAATKKEIAGVITAS-----W 317 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G Q+RSYVL PYQMVKDLRT E +PS+V DGDLD F+ A + +K Sbjct: 318 GDQMRSYVLAPYQMVKDLRTEFEVNNPSNVFDGDLDGFISAGIKWRK 364 >gi|332287121|ref|YP_004422022.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC] gi|325506910|gb|ADZ18548.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC] gi|328914361|gb|AEB55194.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC] Length = 294 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 143/249 (57%), Positives = 185/249 (74%), Gaps = 1/249 (0%) Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + LLSGE D N +L ++AGAGGTES DW ML RMY RWA + ++K E ++ +G+ AG Sbjct: 40 QRLLSGEVDKNPCFLTINAGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAG 99 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IK T+ G AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I Sbjct: 100 IKHVTVKFSGDYAYGYAKAERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIR 159 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG++V CQ+ERSQ +N+ MLRA++ Sbjct: 160 PNDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARM 219 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-L 343 Y+ LQ+R E I +K EI WG QIR+YV QPY +VKD+RT E + ++DG+ L Sbjct: 220 YQQILQERLEKQLIDRKNKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELL 279 Query: 344 DDFMKATLA 352 DDF+KA LA Sbjct: 280 DDFVKAYLA 288 >gi|256424469|ref|YP_003125122.1| peptide chain release factor 2 [Chitinophaga pinensis DSM 2588] gi|256039377|gb|ACU62921.1| bacterial peptide chain release factor 2 (bRF- 2) [Chitinophaga pinensis DSM 2588] Length = 362 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 149/355 (41%), Positives = 229/355 (64%), Gaps = 12/355 (3%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +L+ LGG D + + ++ T P W + A +++E + + + +Q Sbjct: 12 RLHVLGGFLDVQDRIAKIENDKQLTLAPGFWDDNARATSILKEIKVNKFWVDLYENVQTS 71 Query: 66 LCDNLILLEL-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + D+ +LL+ A EE+ ++ L + +F+S L+ D A L Sbjct: 72 IEDSAVLLDFQKEGEASEEEVAQAYHAATEALDEL-------EFKSTLNEPEDEMPAVLT 124 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +++GAGGTESQDWA MLLRMY + EK+ +K +++ G+ AGIKSA+L + G AYG Sbjct: 125 INSGAGGTESQDWAEMLLRMYRMYGEKQGWKVSEIDVQYGDGAGIKSASLEMDGSFAYGL 184 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+D+N+RRHTSF+SI+VYP+VDD+IEI ++ +D + YR+ G GG Sbjct: 185 LKAESGVHRLVRISPFDANARRHTSFASIFVYPLVDDTIEIAVNPADLVWEFYRSGGKGG 244 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN ++AVR+ H+P+G++++CQQ R+Q +N+ +A ML+++LYE EL+KREE+ N Sbjct: 245 QNVNKVETAVRLKHVPSGIIIECQQARTQGENREKALTMLKSRLYEEELRKREELKNAAN 304 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++K +I WG QIRSYV PY+M+KD RT+ E + V+DG+L+ F+KA L + K Sbjct: 305 ANKRKIEWGSQIRSYVFHPYKMIKDHRTDYEVGNVQPVMDGELEGFIKAYLMMSK 359 >gi|300361282|ref|ZP_07057459.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03] gi|300353901|gb|EFJ69772.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03] Length = 270 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 137/245 (55%), Positives = 180/245 (73%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A K E + GEEAG+K Sbjct: 16 LLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHDLKFEIEDYEPGEEAGVK 75 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 S ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ V P +D SIE++I+ Sbjct: 76 SVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDQSIEVDINPD 135 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ +N+ A NMLRAKL++ Sbjct: 136 DLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNRETAMNMLRAKLFQ 195 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE +K+++ + ++ EIG+G QIRSYV PY MVKD RTN E + + V+DG LD+F Sbjct: 196 LEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFETSDVNGVMDGKLDNF 255 Query: 347 MKATL 351 + A L Sbjct: 256 IYAYL 260 >gi|298244286|ref|ZP_06968092.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963] gi|297551767|gb|EFH85632.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963] Length = 337 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 141/322 (43%), Positives = 214/322 (66%), Gaps = 6/322 (1%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL---EEDDCSILQETS 89 P W + +A+ M++ L ++ +++ +L D L ELAL EE D + E + Sbjct: 3 PDFWSDNRKAQAHMQQLNALREEVTTWEQLATQLKD---LQELALMLEEEPDDDMQAEVA 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ I+ ++E +F +LSGE D +A L +HAG+GG ++QDWA MLLRMY RWA++ + Sbjct: 60 QSIHPIEEQIEKLEFALMLSGEHDEKNAILSIHAGSGGVDAQDWAEMLLRMYLRWADQHR 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+T+ + +GEEAGIKSAT+ I+G AYG+L+ E G HRL+R+SP+D+ RR TSF+ + Sbjct: 120 FRTQIYDYSEGEEAGIKSATVEIEGRFAYGYLRSEAGTHRLIRLSPFDAAHRRQTSFAKV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P ++++IEI I D +DTYR++GAGGQHVN TDSAVR+ H+P+G+VV CQ ERSQ Sbjct: 180 ELMPDIENTIEISIRPEDIEVDTYRSTGAGGQHVNKTDSAVRMRHVPSGIVVTCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A +L+A+L+ELE +K +E A + + +G QIRS ++ PY + KD RTN Sbjct: 240 LQNREVALKILKARLFELEQKKHDEEAARLKGEHVQADFGTQIRSVIVHPYNIAKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + + L G++D F+ A L Sbjct: 300 HETSDTTAYLAGNVDPFIHAYL 321 >gi|308235215|ref|ZP_07665952.1| peptide chain release factor 2 [Gardnerella vaginalis ATCC 14018] gi|311114816|ref|YP_003986037.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019] gi|310946310|gb|ADP39014.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019] Length = 380 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 144/327 (44%), Positives = 209/327 (63%), Gaps = 3/327 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + +P LW + A+ + + + + ++ ++ R+ D L+EL EE+D + Sbjct: 36 LEKQASEPGLWDDSDHAQQVTSKLSAAQSQLKRLQAVEQRIEDTKTLIELGQEEEDADSM 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L I E++ + ++LL GE D+ A + + +GAGG ++ D+A MLLRMY RWA Sbjct: 96 SEAQEELGSIAHELDDMEVQTLLDGEYDARAAVVTIRSGAGGVDAADFAQMLLRMYLRWA 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ +KT+ ++ EEAGIKSAT + P AYG L E G HR+VRISP+D+ RR T Sbjct: 156 ERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTG 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FS++ V P+V+ + I+I +SD R+DT++ASG GGQ VNTT SAVRITH+PTG+VV Q Sbjct: 216 FSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQD 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ +N+A A +L+++L L L+ EE A E + + WG Q+RSYVL PYQMVK Sbjct: 276 ERSQIQNRAAAMAVLQSRL--LVLKHAEEAAKKKELAGDIKASWGDQMRSYVLHPYQMVK 333 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 DLRT E + V DGD+D F++A + Sbjct: 334 DLRTGYETSQTQAVFDGDIDGFIEAGI 360 >gi|297243831|ref|ZP_06927761.1| protein chain release factor B [Gardnerella vaginalis AMD] gi|296888252|gb|EFH26994.1| protein chain release factor B [Gardnerella vaginalis AMD] Length = 378 Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 146/339 (43%), Positives = 213/339 (62%), Gaps = 3/339 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D+ ++ L + +P LW + A+ + + + + ++ ++ R+ D L+ Sbjct: 24 LDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVEQRIEDTKTLI 83 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EE D + E + L I E++ + ++LL GE D+ A + + +GAGG ++ D+ Sbjct: 84 ELGEEEGDADSMNEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGVDAADF 143 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L E G HR+VRI Sbjct: 144 AQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRMVRI 203 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ VNTT SAVRIT Sbjct: 204 SPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRIT 263 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQI 312 H+PTG+VV Q ERSQ +N+A A +L+++L L L+ EE A E + + WG Q+ Sbjct: 264 HLPTGLVVSMQDERSQIQNRAAAMAVLQSRL--LVLKHAEEAAKKKELAGDIKASWGDQM 321 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYVL PYQMVKDLRT E + V DGD+D F++A + Sbjct: 322 RSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGI 360 >gi|15842676|ref|NP_337713.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551] gi|13882995|gb|AAK47527.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551] Length = 371 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 156/348 (44%), Positives = 217/348 (62%), Gaps = 4/348 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + + D + R+ L + DPHLW + A+ + E H + ++E++ RL Sbjct: 16 LTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRL 75 Query: 67 CDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +L ELA EE + ++ L+ ++ ++E + +LLSGE D +A + + + Sbjct: 76 DDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRS 135 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG L Sbjct: 136 GAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSV 195 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GGQ V Sbjct: 196 EQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSV 255 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ E+SQ +NK A +L+AKL E + + ++ Sbjct: 256 NTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERXRLEERAELDALKADG 315 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRT E +P+ VLDGDLD F++A + Sbjct: 316 GS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGI 362 >gi|161507200|ref|YP_001577154.1| peptide chain release factor 2 [Lactobacillus helveticus DPC 4571] gi|160348189|gb|ABX26863.1| Peptide chain release factor 2 [Lactobacillus helveticus DPC 4571] gi|328461868|gb|EGF34090.1| peptide chain release factor 2 [Lactobacillus helveticus MTCC 5463] Length = 332 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 155/315 (49%), Positives = 204/315 (64%), Gaps = 6/315 (1%) Query: 37 QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96 Q +I L++E++ SF+K QD D L LEL E D + QE +L+ ++ Sbjct: 14 QKLISDNNLLKEKRD-----SFLKLQQD-YEDELTALELLRAEPDADLQQEVETDLKDLQ 67 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + LLSG+ DS++A LE+H GAGGTE+ DW ML RMY R+ + FK E + Sbjct: 68 EAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAGFKFEIND 127 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GEEAG+KS ++ I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ V P +D Sbjct: 128 YEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASVEVIPEID 187 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 DSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ +N+ A Sbjct: 188 DSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQNRETA 247 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT E + Sbjct: 248 MNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGYETADVN 307 Query: 337 DVLDGDLDDFMKATL 351 V+DG L F+ + L Sbjct: 308 GVMDGKLQPFIYSYL 322 >gi|283783522|ref|YP_003374276.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05] gi|283441040|gb|ADB13506.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05] Length = 378 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 146/339 (43%), Positives = 212/339 (62%), Gaps = 3/339 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D+ ++ L + +P LW + A+ + + + + ++ + R+ D L+ Sbjct: 24 LDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIEDTKTLI 83 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EE D + E + L I E++ + ++LL GE D+ A + + +GAGG ++ D+ Sbjct: 84 ELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGVDAADF 143 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L E G HR+VRI Sbjct: 144 AQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRMVRI 203 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ VNTT SAVRIT Sbjct: 204 SPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRIT 263 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQI 312 H+PTG+VV Q ERSQ +N+A A +L+++L L L+ EE A E + + WG Q+ Sbjct: 264 HLPTGLVVSMQDERSQIQNRAAAMAVLQSRL--LVLKHAEEAAKKKELAGDIKASWGDQM 321 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYVL PYQMVKDLRT E + V DGD+D F++A + Sbjct: 322 RSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGI 360 >gi|300783176|ref|YP_003763467.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32] gi|299792690|gb|ADJ43065.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32] Length = 357 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 151/349 (43%), Positives = 217/349 (62%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L + + D D +++ L + P+LW + A+ + + H + + ++ Sbjct: 4 LTGKLTQIESVMDLDALRAQVADLEQQASSPNLWDDPEAAQKVTSQLSHRQGELRRVSDL 63 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA E D + E L + ++ + +LLSGE D +A + + Sbjct: 64 RQRLDDLGVLYELAEAEGDSGSMAEAEAELTDLGKAIDGLEVRTLLSGEYDDRNAVVTIR 123 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ + T+ +I EEAGIKSAT + P YG L Sbjct: 124 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVYDISYAEEAGIKSATFKVSAPYVYGTLS 183 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V P V++ ++++E D R+D YR+SG GGQ Sbjct: 184 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDVAEKDIRVDVYRSSGPGGQS 243 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A +L+A+L + +K EE A + Sbjct: 244 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAAAMKVLQARL--MLRKKEEERAEMDALR 301 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRT+ E +P+ VLDGD+D F+ A + Sbjct: 302 DGGSSWGNQMRSYVLHPYQMVKDLRTDYEVGNPTAVLDGDIDGFLDAGI 350 >gi|221195492|ref|ZP_03568547.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626] gi|221184679|gb|EEE17071.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626] Length = 371 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 161/351 (45%), Positives = 207/351 (58%), Gaps = 7/351 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L+ + D + ++ L + W + A+ M L + ++ I Sbjct: 12 LTARLDEVESYLHIDEKREEIASLTQISAKADFWNDADFARQTMARLASLKDDVAGIDAA 71 Query: 63 QDRLCDNLILLELALEEDDCSILQET---SDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 +L D LEL E +D +L E+ +D+L R E+E S + E D DA + Sbjct: 72 HAKLEDAKAALELGSETEDAGLLAESEHLADSLARDLSELE---LSSWFTDELDHGDAIV 128 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 V G GG E+QDWA+ML MY R+A +R + + E E GI AT + G NAYG Sbjct: 129 TVKPGQGGLEAQDWADMLFHMYLRYAARRGWSVDIAEATPAEVIGIDRATFTVSGKNAYG 188 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L+ EQGVHRLVRISP D RR TSF+ + V PV+ IE++I SD RID Y ASG G Sbjct: 189 MLRAEQGVHRLVRISPTDDKKRRQTSFAGVEVLPVLPAEIEVDIDPSDLRIDVYHASGPG 248 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVRITHIPTGVVV CQ ERSQ +NKA A N+LR++LYE+E +KRE + Sbjct: 249 GQGVNTTDSAVRITHIPTGVVVTCQNERSQLQNKAAAMNILRSRLYEIEREKREAELDEL 308 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKA 349 K EI +G QIRSYVL PYQ+VKDLRT E + VL DGDLD F+ A Sbjct: 309 RGPKHEISFGNQIRSYVLYPYQLVKDLRTGEETGNVDAVLDDGDLDPFIIA 359 >gi|302334951|ref|YP_003800158.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM 7084] gi|301318791|gb|ADK67278.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM 7084] Length = 370 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 155/346 (44%), Positives = 206/346 (59%), Gaps = 1/346 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+R+L+ + D + ++ L ++ P W + A M E + I++ Sbjct: 11 LARRLDEVESYLHIDERRRVVAELEERSARPGFWDDADAASRSMTELTRAKEDVQGIEDA 70 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D LEL LE D +L E + ++ E+ + S + + D DA + V Sbjct: 71 RTRLGDASAALELGLETGDGDLLDEAARICGALEDELGELELSSWFADDLDHGDAIVTVT 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+QDW +ML +MY R+ ++R +K + E GI AT + G NAYG L+ Sbjct: 131 PGQGGLEAQDWCDMLFKMYLRYCDRRGWKVTVNDAPAAEAIGIDRATFTVSGKNAYGMLR 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRLVRISP D RR T+F+ + V PV+ D +E++I D RID Y ASG GGQ Sbjct: 191 AEQGVHRLVRISPTDDKKRRQTTFAGVEVLPVLPDDVEVDIDPGDLRIDVYHASGHGGQG 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG VV CQ ERSQ +NKA A +LR++LYELEL KRE + Sbjct: 251 VNTTDSAVRITHLPTGTVVTCQNERSQIQNKAIAMGILRSRLYELELAKREAEIDELRGP 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347 K EIG+G QIRSYVL PYQ+VKDLRT +E + VL DGDLD F+ Sbjct: 311 KHEIGFGNQIRSYVLYPYQLVKDLRTGVETGNVESVLDDGDLDKFI 356 >gi|318040666|ref|ZP_07972622.1| peptide chain release factor 2 [Synechococcus sp. CB0101] Length = 356 Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 147/340 (43%), Positives = 215/340 (63%), Gaps = 2/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD R L P W + +A+ MR+ + + + + Q + D Sbjct: 5 VFDVPALKARQQDLEQLASQPDFWDDQKQAQAKMRQLDEVKAQLEQLSQWQGAVADAEAT 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +E+ E D +L E+++ LQ+++ +++ + E LLSG D A + ++AGAGGT++QD Sbjct: 65 VEIYGLEPDEELLSESNEALQKLRSDLDRWELERLLSGPYDKEGAVISINAGAGGTDAQD 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML+RMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRLVR Sbjct: 125 WALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V P +++ ++++I + D I T R+ GAGGQ+VN ++AVRI Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 HIPTG+ V+C QERSQ +NK +A +L AKL + ++R EIA+I E WG Q Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQ 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PYQMVKDLRT E T V+DGDLD F+++ L Sbjct: 304 IRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343 >gi|91202802|emb|CAJ72441.1| strong similarity to protein chain release factor 2 (RF-2) [Candidatus Kuenenia stuttgartiensis] Length = 316 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 143/293 (48%), Positives = 204/293 (69%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++E+Q + L++L EE D E ++ ++E + ++L D +AY Sbjct: 3 LQELQKTYEEIEFLVDLMDEESDERTTAEIVGDIALFTQKLEKLELHTMLGEAHDHCNAY 62 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L ++AGAGGTES DW +ML RMY+RWAEK ++ GEEAG+K T+LI+G Y Sbjct: 63 LSIYAGAGGTESCDWVSMLFRMYSRWAEKNGHTLSLIDSLAGEEAGLKRITVLIEGEYVY 122 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G LK E GVHRLVRISP+DSN+RRHTSF+++ V P +++ EIEI++++ ++DTYR+SGA Sbjct: 123 GHLKSEIGVHRLVRISPFDSNARRHTSFAAVDVLPEIEEEEEIEINDNELQVDTYRSSGA 182 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T SAVRITH+PTG+V+ CQ ERSQH+N+ +A NML+AK+Y+++ +++E + Sbjct: 183 GGQHVNKTSSAVRITHLPTGIVIACQSERSQHQNRRRAINMLKAKIYQIKEKEKERELSA 242 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K EI WG QIRSYVLQPY +VKDLRT E + +LDG+++ F++A L Sbjct: 243 AYDEKGEIAWGNQIRSYVLQPYSLVKDLRTGKESGNTQAMLDGEIEGFIEAYL 295 >gi|58336996|ref|YP_193581.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM] gi|227903556|ref|ZP_04021361.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC 4796] gi|58254313|gb|AAV42550.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM] gi|227868443|gb|EEJ75864.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC 4796] Length = 332 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 204/320 (63%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 P W N +A+ L+ E L + SF+K +D + L L+L EE D + E + Sbjct: 4 PDFWDNQEKAQKLISENNVLKEKRDSFLKLSED-YENELTALDLLREEPDSDLQTEVETD 62 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L ++ + + LLSG+ DS++A E+H GAGGTE+ DW MLLRMY R+ + FK Sbjct: 63 LIALQEAFHNYELDLLLSGKYDSHNALFEIHPGAGGTEAMDWGQMLLRMYQRYCDTAGFK 122 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GEEAG+KS T + G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ V Sbjct: 123 FEINDYEPGEEAGVKSVTARVVGHNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASVEV 182 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ + Sbjct: 183 IPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQIQ 242 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT E Sbjct: 243 NRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGYE 302 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + V+DG L F+ + L Sbjct: 303 TADTTGVMDGKLQPFIYSYL 322 >gi|317507095|ref|ZP_07964856.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC BAA-974] gi|316254589|gb|EFV13898.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC BAA-974] Length = 372 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 157/356 (44%), Positives = 216/356 (60%), Gaps = 12/356 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L+ + D ++ L ++ DP LW++ + + + + + Sbjct: 12 LSATLSTVESALDLSKLEAEIADLESQAADPSLWEDQDRGQEVTSGLARRQATLRAVTAL 71 Query: 63 QDRLCDNLILLELALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 + RL D +L ELA EDD L E + ++ ++E + +LL+GE D +A Sbjct: 72 RSRLDDLHVLYELA--EDDSGAEGQEALAEADAERKALREDIETLEVRTLLNGEYDEREA 129 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + +GAGG ++ DWA ML+RMY RWAE+ K E +I EEAGIKSAT +K A Sbjct: 130 LVTIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEIYDISYAEEAGIKSATFAVKSAYA 189 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG L EQG HRLVRISP+D+ RR TSF+ + V PVV + IEI ES+ R+D YR+SG Sbjct: 190 YGTLSVEQGTHRLVRISPFDNQGRRQTSFADVEVLPVVGTTDHIEIPESEVRVDVYRSSG 249 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVR+TH+PTGVVV CQ E+SQ +NK A +L+AKL E Q+ +E N Sbjct: 250 PGGQSVNTTDSAVRLTHLPTGVVVTCQNEKSQLQNKLSAMRVLQAKLLERRRQEEQEQLN 309 Query: 298 I--GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G+ + WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F+++ + Sbjct: 310 ALKGDGGSS---WGTQMRSYVLAPYQMVKDLRTEYEVGNPTTVLDGDIDGFLESGI 362 >gi|186681801|ref|YP_001864997.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102] gi|186464253|gb|ACC80054.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102] Length = 289 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 140/281 (49%), Positives = 194/281 (69%), Gaps = 5/281 (1%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +LEL E D ++LQE + ++ +++ + + LLSG D+ A L + AGAGGT++Q Sbjct: 1 MLEL---ETDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTISAGAGGTDAQ 57 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA ML+RMYTRW E +K E +G+EAGIKSATL I G AYG+L+ E G HRLV Sbjct: 58 DWAFMLMRMYTRWGEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRSEMGTHRLV 117 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+++N +R TSF+ + V P +D+S+++EI + D I T R+ G GGQ+VN ++AVR Sbjct: 118 RISPFNANGKRQTSFAGVEVMPQIDNSVQLEIPDKDLEITTTRSGGKGGQNVNKVETAVR 177 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310 I HIPTG+ V+C +ERSQ +NK +A N L+AKL + ++R +EIA I E WG Sbjct: 178 IVHIPTGLAVRCTEERSQLQNKEKALNRLKAKLLVIAKEQRAQEIAEI-RGDMVEASWGN 236 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRTN E T+ DV++G+LD F++A L Sbjct: 237 QIRNYVFHPYQMVKDLRTNTETTAIGDVMNGELDPFIQAYL 277 >gi|298208407|ref|YP_003716586.1| putative peptide chain release factor [Croceibacter atlanticus HTCC2559] gi|83848330|gb|EAP86199.1| putative peptide chain release factor [Croceibacter atlanticus HTCC2559] Length = 316 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 133/253 (52%), Positives = 190/253 (75%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E +F+++LS E D A L++ AGAGGTES DWA ML+RMY WAEKR FK + L + Sbjct: 52 IEDLEFKNMLSEEGDDLSAVLQITAGAGGTESCDWAEMLMRMYLMWAEKRGFKIKELNLQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+ AGIK+ +L I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDS Sbjct: 112 NGDVAGIKTVSLEIEGNFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDS 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEI+I+ +D D R+SGAGGQ+VN ++ +TH P+G+V+ + RSQ +N+ +A Sbjct: 172 IEIDINPADISWDFARSSGAGGQNVNKVETKAILTHHPSGIVIHNSETRSQLENREKAMQ 231 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 ML+++LYE+EL+K++ + ESSK +I WG QIR+YV+ PY++VKD+RT E + V Sbjct: 232 MLKSQLYEIELRKQQAQRDEIESSKMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAV 291 Query: 339 LDGDLDDFMKATL 351 ++GD+D F+KA L Sbjct: 292 MNGDIDAFLKAFL 304 >gi|148272488|ref|YP_001222049.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830418|emb|CAN01353.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 367 Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 148/336 (44%), Positives = 216/336 (64%), Gaps = 5/336 (1%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q + L+ + +P LW + +A+ + + H + + I E+Q RL D +L+E+A +D Sbjct: 31 QEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDELQRRLDDLDVLVEMA--KD 88 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D +E L I ++ + ++LL+GE D A + + AGAGG ++ D+A ML+RM Sbjct: 89 DEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTIRAGAGGVDAADFAEMLMRM 148 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE+ + L+ EEAGIKSAT I P A+G L E G HRLVR+SP++S Sbjct: 149 YLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTLSVEAGTHRLVRMSPFNSAG 208 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +R TSF+++ V P+++ + IEI E++ R+D +R+SG GGQ VNTTDSAVRITH+PTG+V Sbjct: 209 KRQTSFAAVEVVPLIEQTESIEIPENEMRVDVFRSSGPGGQSVNTTDSAVRITHLPTGIV 268 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQP 319 V CQ E+SQ +N+A A +L+++L L +Q+ +E A E + WG Q+RSYVL P Sbjct: 269 VTCQNEKSQIQNRAAALRVLQSRL--LLVQREQEAATKKELAGNITASWGDQMRSYVLAP 326 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 YQMVKDLRT E +PS+V DGDLD F+ A + +K Sbjct: 327 YQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRK 362 >gi|298252599|ref|ZP_06976393.1| protein chain release factor B [Gardnerella vaginalis 5-1] gi|297532963|gb|EFH71847.1| protein chain release factor B [Gardnerella vaginalis 5-1] Length = 378 Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 146/345 (42%), Positives = 214/345 (62%), Gaps = 3/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + + D D+ ++ L + +P LW + A+ + + + + ++ + R+ Sbjct: 18 SSISKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIE 77 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L+EL EE D + E + L I E++ + ++LL GE D+ A + + +GAGG Sbjct: 78 DTKTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGG 137 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ++ D+A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L E G Sbjct: 138 VDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGT 197 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+VRISP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ VNTT Sbjct: 198 HRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGVNTTY 257 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEI 306 SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L L+ EE A E + + Sbjct: 258 SAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRL--LVLKHAEEAAKKKELAGDIKA 315 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + Sbjct: 316 SWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGI 360 >gi|332671116|ref|YP_004454124.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484] gi|332340154|gb|AEE46737.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484] Length = 382 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 148/351 (42%), Positives = 220/351 (62%), Gaps = 3/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D +++ L+ + P+LW + A+ + + + + Sbjct: 24 ELRTTLESIQAVSDPTALKAKIALLSEQASVPNLWDDPDAAQKVTSALSATQAELDRVAK 83 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D L+EL +E +D L E L I+ ++ + +LL+GE D +A + + Sbjct: 84 LGGRIDDLETLVELGVEMEDEDSLAEAEVELTGIRKDLGELEVRTLLNGEYDQREAVVTI 143 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 144 RSGAGGVDAADFAEMLLRMYLRWAERHGYPTTVLDTSYAEEAGLKSATFEVKAPYAFGHL 203 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GGQ Sbjct: 204 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPESEIKVDVFRSSGPGGQ 263 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++K EE A E Sbjct: 264 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLVRKAEEDAKKKEL 321 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + WG Q+RSYVLQPYQMVKDLRT E +PS V DGD+DDF++A + Sbjct: 322 AGDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGI 372 >gi|331089985|ref|ZP_08338875.1| peptide chain release factor 2 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402899|gb|EGG82465.1| peptide chain release factor 2 [Lachnospiraceae bacterium 3_1_46FAA] Length = 332 Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 152/322 (47%), Positives = 224/322 (69%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W + ++ +M+E + L +++ I+++ D ++L+E++ EED +E + Sbjct: 2 EEPGFWDDPEVSQQVMKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIEE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 LQ+ + E + +LL+G D ++A + +HAGAGGTES DW ML RMYTRWAEK+ + Sbjct: 62 ELQQFEETFEELRIGTLLTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+ +G+ AG+K T +KG NAYG+L+ E+GVHRLVRISP++S +R TSF+S Sbjct: 122 SIEELDYLEGDVAGVKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ I+IEI++ D +IDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQH Sbjct: 182 VIPDIEEDIDIEINDDDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQH 241 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK +A ML++KLY ++ Q++ E + +I +G QIRSYV+QPY MVKD RTN Sbjct: 242 MNKDKAMQMLKSKLYLMKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTMVKDHRTNA 301 Query: 331 EKTSPSDVLDGDLDDFMKATLA 352 E ++ V+DG++D F+ A L+ Sbjct: 302 EVSNVGGVMDGNIDPFINAYLS 323 >gi|159902739|ref|YP_001550083.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9211] gi|159887915|gb|ABX08129.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9211] Length = 356 Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 149/323 (46%), Positives = 209/323 (64%), Gaps = 8/323 (2%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETS 89 P W + +AK MR LD + +K++ D + D + LEL E D +L E Sbjct: 25 PEFWNDQQKAKKEMR---RLDEVKAQLKKLVDWDAAIEDAQVSLELYELEPDDEMLAEAI 81 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L +K +++ + E LLSG+ D L ++AGAGGT++QDWA MLLRMYTRWA+ Sbjct: 82 KGLDNLKSDLDLWELERLLSGQYDKEGVVLSINAGAGGTDAQDWAQMLLRMYTRWADDHG 141 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E+ +GEEAGIKSATL I G AYG+L+ E+G HRLVRISP+++N +R TSF+ + Sbjct: 142 MKVTVDELSEGEEAGIKSATLEIDGRYAYGYLQNEKGTHRLVRISPFNANGKRQTSFAGV 201 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +++ +E++I E D I T R+ GAGGQ+VN ++AVRI H+P+G+ V+C QERSQ Sbjct: 202 EIMPKLEEEVELDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGLAVRCTQERSQ 261 Query: 270 HKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 +NK +A +L+AKL + ++R +IA+I E WG QIR+YV PYQMVKDLRT Sbjct: 262 LQNKEKAMALLKAKLMIIAQEQRASQIADI-RGDIVEAAWGNQIRNYVFHPYQMVKDLRT 320 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 E T V++GDLD F++A L Sbjct: 321 GKESTDVEGVMNGDLDPFIQALL 343 >gi|32474334|ref|NP_867328.1| peptide chain release factor 2 [Rhodopirellula baltica SH 1] gi|32444872|emb|CAD74874.1| peptide chain release factor 2 (RF-2) [Rhodopirellula baltica SH 1] gi|327543020|gb|EGF29467.1| peptide chain release factor 2 [Rhodopirellula baltica WH47] Length = 337 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 146/323 (45%), Positives = 215/323 (66%), Gaps = 3/323 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + A+ ++ + + L +S + E++ D L E+A ++D SI+ E + Sbjct: 4 PDFWNDSESAQKVVMQLKGLKGIVSPLNELESSAEDLEALFEMA--DEDESIVDEVRSEI 61 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 R+++ ++ + ++LL+G DS A + ++A GGT++ DWA+MLLRMY+ WA +++K Sbjct: 62 DRLEVVLDDLELKALLNGPNDSAGAIVTINARDGGTDANDWADMLLRMYSAWAVGQEYKI 121 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ + EEAGI A++ ++GP AYG+LKGE+G+HRLVRISP++S S+R TSF+++ V Sbjct: 122 ELLDRQENEEAGINHASIAVRGPMAYGYLKGEEGMHRLVRISPFNSESKRQTSFAAVSVS 181 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DDSIE+ + + D R DTYRASGAGGQHVN TDSA+R+THIPT VVQCQ +RSQH+N Sbjct: 182 PEIDDSIEVNVEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNTVVQCQNQRSQHQN 241 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + AW MLRAKL +E ++RE ++ G+G QIR+Y L P Q VKD RT Sbjct: 242 RDTAWKMLRAKLARIEEERREAEEAKKYETQARTGFGSQIRNYFLHPDQRVKDARTGHYV 301 Query: 333 TSPSDVLDG-DLDDFMKATLAIK 354 + + VLDG +L F A L +K Sbjct: 302 GNFNSVLDGSELQGFFDAFLRLK 324 >gi|254422250|ref|ZP_05035968.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335] gi|196189739|gb|EDX84703.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335] Length = 345 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 141/320 (44%), Positives = 211/320 (65%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W A+ ++E + ++ L D+ +LEL E D S+L E + Sbjct: 15 PDFWDEQESAQKSLQELNDYKANLDQVEGWSTSLEDSEAILELLDLEQDESLLLEAESTV 74 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 R+ E++ + + LLSG D A L ++AGAGGT++QDW+ MLLRMYTRW+E+ ++ Sbjct: 75 NRLSKELDQWELQQLLSGPYDKAGAVLTINAGAGGTDAQDWSEMLLRMYTRWSEQNGYQF 134 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 + +E +G+EAG+KS T+ + G AYG+LKGE+G HRLVRISP+++N +R TSF+ + V Sbjct: 135 KLIEKSEGDEAGLKSVTMEVYGRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 194 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P++D +E++I + D I T R+ GAGGQ+VN ++AVRITH+PT + V+C QERSQ +N Sbjct: 195 PILDQKVELDIPDKDLEIKTSRSGGAGGQNVNKVETAVRITHLPTSISVRCTQERSQLQN 254 Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +A +L +KL + ++R + IA+I E WG QIR+YV PYQMVKDLRT++E Sbjct: 255 KEKAMALLTSKLLVIAQEQRTQAIADI-RGDMVEAAWGNQIRNYVFHPYQMVKDLRTSVE 313 Query: 332 KTSPSDVLDGDLDDFMKATL 351 T+ DV++GDL+ F++A L Sbjct: 314 TTAVDDVMNGDLEAFIQAYL 333 >gi|224101237|ref|XP_002312196.1| predicted protein [Populus trichocarpa] gi|222852016|gb|EEE89563.1| predicted protein [Populus trichocarpa] Length = 379 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 147/336 (43%), Positives = 220/336 (65%), Gaps = 7/336 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L+ L +K D LW + +A+ + + + I + E + ++ + +++L E D Sbjct: 32 QELADLESKAADSSLWDDRAKAQETLLALTDVKDKIKLLAEFKTKVEEAETIVKLTEEMD 91 Query: 81 --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D L+E + ++ + ++ + LLSG D A L + AGAGGT++QDWA+MLL Sbjct: 92 STDAGFLEEATGIIKELNKALDKYELTQLLSGPYDKEGAVLSITAGAGGTDAQDWADMLL 151 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW EK+++KT+ +E GEEAGIKSAT+ ++G AYG+L GE+G HR+VR SP++S Sbjct: 152 RMYVRWGEKQRYKTKVVESSPGEEAGIKSATVEVEGRYAYGYLSGEKGTHRIVRQSPFNS 211 Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 R TSFS + V P++ ++S+++E+ E D I T RA G GGQ+VN ++AVRITHIPT Sbjct: 212 KGLRQTSFSGVEVMPLLPEESMDVELPEEDLEISTSRAGGKGGQNVNKVETAVRITHIPT 271 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315 GV V+C +ERSQ NK +A + L+AKL + E Q+ EI I G++ K E WG+QIR+Y Sbjct: 272 GVTVRCTEERSQLSNKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIRNY 329 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V PY++VKD+RT E + + V+DG+LD F++A L Sbjct: 330 VFHPYKLVKDVRTGHETSDIASVMDGELDPFIRAYL 365 >gi|261749632|ref|YP_003257318.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497725|gb|ACX84175.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 367 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 146/350 (41%), Positives = 229/350 (65%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S ++N L + + D + + K + + W+N +AK + + I E+ Sbjct: 10 ISEKINKLQEVLNIDQIKESIEKEEKKISNQNFWKNCKKAKNFTKRLHAMKTCIKNFFEL 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L + IL L+ EED + +E L + K + +F++LLS E D +A L++ Sbjct: 70 KNALEELEILFSLSKEED---LEKEVKIQLNKTKNLLSNIEFKNLLSEEEDIFNAVLQIS 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DW +ML+RMY WAEK KF + + G+ GIKS TL + G A+G+LK Sbjct: 127 SGAGGTESCDWTSMLMRMYIMWAEKNKFSVKNIHHIPGDITGIKSVTLELDGLYAFGYLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRL+R+SP+D+NS+RHTSFSS++VYP+VD I+I I+ SD + +T+R+SG+GGQ+ Sbjct: 187 GENGVHRLIRLSPFDNNSKRHTSFSSVYVYPLVDKDIDININMSDIQWNTFRSSGSGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN +S VR+ H PTG++++ + RSQ +N+ +A ++L+++L+E+E+ K+ E N ESS Sbjct: 247 VNKVESGVRLRHHPTGIIIENTETRSQMQNRQKALHLLKSRLFEIEISKKNEKKNKIESS 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIR+Y++ PY++VKDLRT E T V++G++D F+K L Sbjct: 307 KKKIEWGSQIRNYIMHPYKLVKDLRTGYETTQIHSVMNGEIDIFLKKFLV 356 >gi|269795803|ref|YP_003315258.1| peptide chain release factor 2 [Sanguibacter keddieii DSM 10542] gi|269097988|gb|ACZ22424.1| bacterial peptide chain release factor 2 (bRF-2) [Sanguibacter keddieii DSM 10542] Length = 372 Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 144/348 (41%), Positives = 219/348 (62%), Gaps = 4/348 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + + D + R++ L+ + P LW + A+ + + I ++ R+ Sbjct: 17 LATISAVTDPEALKIRIAELSDQASAPDLWDDTDAAQKVTTALSQAQTELDRIVNMESRI 76 Query: 67 CDNLILLELALE---EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +L+E+A E DD L+E +L I+ ++ + +LLSGE D+ +A + + A Sbjct: 77 DDLEVLVEMATEGDGADDVETLEEAQKDLDGIRRDLGDLEVRTLLSGEWDAREAVVSIRA 136 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ D+A ML+RMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 137 GAGGVDAADFAEMLMRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGNLSV 196 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HRLVRISP+D+ RR TSF+++ V P+++ + ++I +++ R+D +R+SG GGQ V Sbjct: 197 EAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHVDIPDNEIRVDVFRSSGPGGQSV 256 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L LE Q +E+ + Sbjct: 257 NTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LERQAQEKAMKKEMAGD 315 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVLQPYQMVKDLRT E + S V DG++DDF++A + Sbjct: 316 VKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTSAVFDGEIDDFIEAGI 363 >gi|289432457|ref|YP_003462330.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT] gi|288946177|gb|ADC73874.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT] Length = 361 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 152/329 (46%), Positives = 210/329 (63%), Gaps = 8/329 (2%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSI 84 L T + +P WQ+ A+ M++ + ++ R+ D L ELA L +D S+ Sbjct: 31 LETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRIND---LTELAVLSREDPSL 87 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E + + E++ + SG+ D+ +A L VHAGAGG ESQDWA MLLRM+ RW Sbjct: 88 SNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDWAGMLLRMFMRW 147 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A K+ F E L+ GEEAGIKSATL I+G AYG+LK E GVHRL+R+SP+D++ RHT Sbjct: 148 AAKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSPFDADHARHT 207 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+ + + P +DS++I+I D +ID +R+SG GGQ+V +AVR+THIP+G+VV Q Sbjct: 208 SFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIPSGIVVASQ 267 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRSYVLQPYQM 322 ERSQH+N+ A +L +KL +E+ KR EE A + GE E WG QIRSYVL PY+M Sbjct: 268 TERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAE--WGSQIRSYVLHPYKM 325 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RT+ E + VL+G+LD F+ A L Sbjct: 326 VKDHRTDYEVGNAEAVLEGELDGFISAYL 354 >gi|320335022|ref|YP_004171733.1| peptide chain release factor 2 [Deinococcus maricopensis DSM 21211] gi|319756311|gb|ADV68068.1| Peptide chain release factor 2 [Deinococcus maricopensis DSM 21211] Length = 363 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 155/358 (43%), Positives = 221/358 (61%), Gaps = 20/358 (5%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L L D +RL+ L+ + EDP+LW + A+ + +E L Sbjct: 3 ELLEKLAALREYLDIPGKTRRLNELDKELEDPNLWNDQERARRVTQEATTLRRVTEGYAS 62 Query: 62 IQDRLCDNLILLELA-------LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + +L++A LEE+ SI Q+ D+L R E+L + + Sbjct: 63 LSSDAQGLSEMLDIASDDEKEMLEEEQASI-QQRVDDLYR----------ETLFTMKHSE 111 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 A + + +GAGGTESQDWA ML+RMY RWAE+R FKTE L+ DGE+AGI SA +++G Sbjct: 112 APAIIRIKSGAGGTESQDWAGMLMRMYIRWAERRGFKTEILDQQDGEQAGITSAEFIVRG 171 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTY 233 AYG + E GVHRLVR+SP+DSN+RRHTSF+S+ + P V ++ I+I + +SD R+D Y Sbjct: 172 DRAYGMMAPEHGVHRLVRVSPFDSNNRRHTSFASVDIVPEVPEEQIDIHVPDSDVRVDVY 231 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+ GAGGQ VNTTDSAVR+TH+PTG++V Q RSQ KN+ A+ +L+ +LY++E++KRE Sbjct: 232 RSQGAGGQGVNTTDSAVRVTHLPTGLMVAIQVTRSQIKNREMAFQILKQRLYDIEVKKRE 291 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + I WG QIRSYVL Q VKD RT + + +VLDGD++++M A L Sbjct: 292 AEEMKARGEQKAIEWGSQIRSYVLDK-QYVKDHRTGVMRHDTGNVLDGDIEEYMWAGL 348 >gi|225552175|ref|ZP_03773115.1| peptide chain release factor 2 [Borrelia sp. SV1] gi|225371173|gb|EEH00603.1| peptide chain release factor 2 [Borrelia sp. SV1] Length = 282 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 147/285 (51%), Positives = 200/285 (70%), Gaps = 14/285 (4%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHAGAG 126 + E+A E D S L+ + L+ KQ++ LL+ E D+N+A+L +H+GAG Sbjct: 1 MCEIAENEKDTSGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHSGAG 52 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G Sbjct: 53 GTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVG 111 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRL+RISP+D++ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 112 IHRLIRISPFDADKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKT 171 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 172 SSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEI 231 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 232 SWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 276 >gi|32491189|ref|NP_871443.1| hypothetical protein WGLp440 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166396|dbj|BAC24586.1| prfB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 278 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 140/279 (50%), Positives = 192/279 (68%), Gaps = 1/279 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++LEE+D L E ++ + + ++ + + D + Y+++ G+GG ++QDWA Sbjct: 1 MSLEENDSKSLLEVNNEIILLNKRMKKIELMCYFFEKNDRCNCYMDIQPGSGGIDAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++LLRMY +WA++ FKT+ + E AGIKSAT+ G AYGWLK E G+HRLVR S Sbjct: 61 SILLRMYLKWADRNNFKTDIIYKSSSEIAGIKSATVKFLGSYAYGWLKKETGIHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DSN +RHTSF SI+VYP ++D IEI+I+ SD RID YR+SGAGGQHVN T+SAVRITH Sbjct: 121 PFDSNGKRHTSFCSIFVYPDINDKIEIKINLSDLRIDVYRSSGAGGQHVNRTESAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PT + QCQ +RSQHKNK +A N L++KLYE EL+K+ + I E SK++I WG QIRS Sbjct: 181 LPTKITTQCQSDRSQHKNKEKAINQLKSKLYEFELRKKNKDKKIIEKSKSKIAWGNQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 Y+ +VKDLRT IE +LDGDL+ F+ I Sbjct: 241 YIFDN-SIVKDLRTGIESKKIQSILDGDLNIFLNKNFNI 278 >gi|302024124|ref|ZP_07249335.1| peptide chain release factor 2 [Streptococcus suis 05HAS68] Length = 253 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 134/245 (54%), Positives = 171/245 (69%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 LLS D N+A LE+H G+GGTE+QDW MLLRMY R+ + F E L+ G+EAGIK Sbjct: 4 LLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIK 63 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 S TL GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IEIEI + Sbjct: 64 SVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDD 123 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 + ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q+ N+ +A +L+AKLY+ Sbjct: 124 EVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQ 183 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE +K+ + + K EI WG QIRSYV PY MVKD RT E V+DGDLD F Sbjct: 184 LEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGF 243 Query: 347 MKATL 351 + A L Sbjct: 244 IDAYL 248 >gi|256824891|ref|YP_003148851.1| peptide chain release factor 2 [Kytococcus sedentarius DSM 20547] gi|256688284|gb|ACV06086.1| bacterial peptide chain release factor 2 (bRF-2) [Kytococcus sedentarius DSM 20547] Length = 370 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 147/344 (42%), Positives = 214/344 (62%), Gaps = 3/344 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + D ++L+ L ++ P LW + + + + + I+ + R+ D +L Sbjct: 22 VIDLPRLKEQLADLEQQSSAPDLWDDPENGQKVSAAMSRVRGEVERIESMDSRIDDLEVL 81 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +E+ EE D L E + L I+ VE + +LLSGE D +A + + AGAGG ++ D Sbjct: 82 VEMGTEEGDAETLAEATKELAAIQAAVEKLEVRTLLSGEYDEREAVITIRAGAGGVDAAD 141 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A ML+RMY RWAE+ ++ T+ L+ EEAG+KS T + P AYG L E G HRLVR Sbjct: 142 FAEMLMRMYLRWAERHEYPTKVLDTSYAEEAGLKSVTFEVNVPYAYGNLVVEGGTHRLVR 201 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISPYD+ RR TSF+++ V PV++ + IEI E++ ++D +R+SG GGQ VNTTDSAVR+ Sbjct: 202 ISPYDNQGRRQTSFAAVEVVPVIEQTDSIEIPENEIKVDVFRSSGPGGQSVNTTDSAVRM 261 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQ 311 THIPTG+VV Q E+SQ +N+A A +L+++L L +K EE A E + + WG Q Sbjct: 262 THIPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLQRKAEEAAERKELAGDIKASWGDQ 319 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +RSYVL PYQMVKDLRT E + V DGD+D F++A + K+ Sbjct: 320 MRSYVLHPYQMVKDLRTEHEVGNTQSVFDGDIDGFIEAGIRWKR 363 >gi|156744082|ref|YP_001434211.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941] gi|156235410|gb|ABU60193.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941] Length = 317 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 144/285 (50%), Positives = 195/285 (68%), Gaps = 7/285 (2%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L++LA E+D S+ + + L+R + E+E + E LLSG D DA+L + AG GGT++Q Sbjct: 27 LIDLAAAEEDDSLQADIAAELERTRREIEALEIEVLLSGPYDDRDAFLSIKAGMGGTDAQ 86 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RW E+R F+ ++ DGEEAGIKSAT+ ++GP AYG K E GVHRL+ Sbjct: 87 DWAEMLLRMYMRWGERRGFQVALIDQSDGEEAGIKSATIELRGPYAYGSAKAEAGVHRLI 146 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+SP+++ + R TSF+ + V P VDD+ E+ I D R+D +RASG GGQ VNTTDSAVR Sbjct: 147 RLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRPEDIRVDVFRASGHGGQGVNTTDSAVR 206 Query: 252 ITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANI-GESSKTEI 306 IT+ P +VV CQ ERSQ +N+ A +LR +L E ELQ KREE A + GE + + Sbjct: 207 ITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRGRLLERELQRKREERARLRGEYRQAD- 265 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G Q+R+Y L PY +VKD RT+ E + VLDGD+D F++A L Sbjct: 266 -FGNQMRTYYLHPYTLVKDHRTDYETSDVQAVLDGDIDPFIEAYL 309 >gi|119960719|ref|YP_948373.1| peptide chain release factor 2 [Arthrobacter aurescens TC1] gi|119947578|gb|ABM06489.1| peptide chain release factor 2 [Arthrobacter aurescens TC1] Length = 398 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 144/339 (42%), Positives = 214/339 (63%), Gaps = 5/339 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D D ++ L+ + P LW + A+++ H + + + ++ R+ D +L+E Sbjct: 51 DVDALKTEIAELSEQAGAPDLWDDPASAQVITSRLSHRQSEVERLSKLASRIDDLEVLVE 110 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L +E D + E + L I+ + + +LLSGE D +A + + AGAGG ++ D+A Sbjct: 111 LGQDEGDEDSMAEAAKELSSIRKALAELEITTLLSGEYDEREAVVTIRAGAGGVDAADFA 170 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML+RMY RWAE+ + T ++ EEAG+KSAT +K P A+G L E G HRLVRIS Sbjct: 171 EMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVRIS 230 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D+ RR TSF+++ V P+++ + IEI +++ R+D +R+SG GGQ VNTTDSAVR+TH Sbjct: 231 PFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQSVNTTDSAVRLTH 290 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWGRQI 312 IPTG+VV Q E+SQ +N+A A +L+++L + E Q E+ A G+ + WG Q+ Sbjct: 291 IPTGIVVSMQNEKSQLQNRAAAMRVLQSRLLLVKKEQQDAEKKALAGD---VKASWGDQM 347 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYVL PYQMVKDLRT E + S VLDGD+DDF+ A + Sbjct: 348 RSYVLNPYQMVKDLRTEHEVGNTSAVLDGDIDDFIDAGI 386 >gi|284029674|ref|YP_003379605.1| peptide chain release factor 2 [Kribbella flavida DSM 17836] gi|283808967|gb|ADB30806.1| peptide chain release factor 2 [Kribbella flavida DSM 17836] Length = 373 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 150/351 (42%), Positives = 214/351 (60%), Gaps = 3/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D + ++ L + P LW + A+ + L + + Sbjct: 12 QLDATLTSIEKVLDLDALRREIADLGEQVAAPDLWDDQANAQKVTSRLSSLQADVERVTN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D +++EL+ EE+D L E+ + + ++ + +LLSGE D +A + + Sbjct: 72 LRSRIDDLGVMIELSREENDADSLAESEKEIAALAKSIQSLEVRTLLSGEYDEREALVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A ML RMY RWAE+ + TE + EEAG+KS T +K P AYG L Sbjct: 132 RSGAGGVDAADFAEMLQRMYLRWAERHGYPTEVYDTSYAEEAGLKSTTFGVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V PV++ + EI++ E + RID YR+SG GGQ Sbjct: 192 SVESGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIDVPEEELRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE- 300 VNTTDSAVRITH+PTG VV CQ E+SQ +NKA A M+ K L L+K EE A I Sbjct: 252 SVNTTDSAVRITHLPTGTVVSCQNEKSQLQNKASA--MVILKAKLLALKKAEERAQIDAL 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVL PYQMVKDLRT E + S V DG++DDF++A + Sbjct: 310 RGDVQGSWGDQMRSYVLHPYQMVKDLRTQYESGNTSGVFDGEIDDFVEAGI 360 >gi|111114896|ref|YP_709514.1| peptide chain release factor 2 [Borrelia afzelii PKo] gi|216263773|ref|ZP_03435767.1| peptide chain release factor 2 [Borrelia afzelii ACA-1] gi|110890170|gb|ABH01338.1| peptide chain release factor 2 [Borrelia afzelii PKo] gi|215979817|gb|EEC20639.1| peptide chain release factor 2 [Borrelia afzelii ACA-1] Length = 269 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 141/264 (53%), Positives = 192/264 (72%), Gaps = 10/264 (3%) Query: 97 LEVEY----KQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 +E+E+ KQ++ LL+ E D+NDA+L +H+GAGGTE+ DW ML RMY+R+AE+ Sbjct: 1 MEIEFNILEKQYKDLLTISYFKEELDANDAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RISP+D+ +RHTSF+ Sbjct: 61 KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S+++ PV+D+ IEI I D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R Sbjct: 120 SVFIDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK A +L+++LYE K +E + +K EI WG QIRSYV QPY +VKD R Sbjct: 180 SQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T E ++ + V+DG++D+F++ L Sbjct: 240 TKFENSNITSVMDGNIDNFIEEYL 263 >gi|325066934|ref|ZP_08125607.1| peptide chain release factor 2 [Actinomyces oris K20] Length = 373 Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 151/358 (42%), Positives = 221/358 (61%), Gaps = 6/358 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D ++ELA EE+ IL E +L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGEDAAEILAEAETDLAAISKDLSDLEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ + + L EEAG+KS T + P AY Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L L+++EE A Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRL--LLLKQQEEDAKK 308 Query: 299 GE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 E + + WG Q+RSYVL PYQMVKDLRTN E +P V DGD+D F+ A + +K Sbjct: 309 KELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|218249952|ref|YP_002374604.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7] gi|223889107|ref|ZP_03623696.1| peptide chain release factor 2 [Borrelia burgdorferi 64b] gi|224533928|ref|ZP_03674513.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a] gi|226322014|ref|ZP_03797539.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26] gi|218165140|gb|ACK75201.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7] gi|223885356|gb|EEF56457.1| peptide chain release factor 2 [Borrelia burgdorferi 64b] gi|224512931|gb|EEF83297.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a] gi|226232604|gb|EEH31358.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26] Length = 282 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 147/285 (51%), Positives = 199/285 (69%), Gaps = 14/285 (4%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-----GEADSNDAYLEVHAGAG 126 + E+A E D S L+ + L+ KQ++ LL+ E D+N+A+L +H+GAG Sbjct: 1 MCEIAENEKDTSGLEIEFNTLE--------KQYKDLLTISYFKEELDANNAFLTIHSGAG 52 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G Sbjct: 53 GTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVG 111 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 112 IHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKT 171 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 172 SSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEI 231 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L Sbjct: 232 SWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYL 276 >gi|17227769|ref|NP_484317.1| peptide chain release factor 2 [Nostoc sp. PCC 7120] gi|17135251|dbj|BAB77797.1| peptide chain release factor [Nostoc sp. PCC 7120] Length = 292 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 138/281 (49%), Positives = 198/281 (70%), Gaps = 5/281 (1%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLEL E D ++LQE + ++ +++ + + LLSG D+ A L ++AGAGGT++Q Sbjct: 4 LLEL---ETDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMYTRWAE + +K E +G+EAGIKSATL I G AYG+L+ E G HRLV Sbjct: 61 DWAFMLLRMYTRWAEDQGYKVALAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+++N +R TSF+ + V P +D++++++I + D I T R+ G GGQ+VN ++AVR Sbjct: 121 RISPFNANGKRQTSFAGVEVMPQLDNTVQLDIPDKDLEITTTRSGGKGGQNVNKVETAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310 + H+PTG+ V+C +ERSQ +NK +A L+AKL + + QK +EIA I E WG Sbjct: 181 VVHLPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQI-RGDMVEASWGN 239 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRTN+E T+ +DV++G+LD F+++ L Sbjct: 240 QIRNYVFHPYQMVKDLRTNVETTAIADVMNGELDMFIQSYL 280 >gi|320103729|ref|YP_004179320.1| peptide chain release factor 2 (bRF-2) [Isosphaera pallida ATCC 43644] gi|319751011|gb|ADV62771.1| bacterial peptide chain release factor 2 (bRF-2) [Isosphaera pallida ATCC 43644] Length = 334 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 153/322 (47%), Positives = 205/322 (63%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + AK + E + L+ + + + + D L+ELA E D S+ E Sbjct: 4 PDFWNHQDRAKATIAEIKTLNAVLKPYEALVKQAEDLQALVELADEAGDDSLDDEIDQAT 63 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 Q+ + + + +S+LSG D +A+LE+H G GGTE+ DW+ MLLRMY WAE + +K Sbjct: 64 QKAREAFDKFELQSMLSGMNDHCNAFLEIHPGEGGTEACDWSEMLLRMYMMWAESKGYKV 123 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E + DG AGI+SA L I G A+G+LKGE GVHRLVRISP+D+ RR TSF+S+ V Sbjct: 124 ELISREDGGVAGIQSAQLKISGDYAFGYLKGEAGVHRLVRISPFDAAGRRQTSFASVDVT 183 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD+IEIEI + D + D +R G GGQH N T+S VR TH+PTGVV + + ERSQ +N Sbjct: 184 PEIDDTIEIEIRDCDLKRDVFRCGGPGGQHQNKTESGVRYTHLPTGVVAESRSERSQFQN 243 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 A +L+AKL LE +KRE + K++IG+G QIRSYVLQPY +VKDLRT E Sbjct: 244 DDLALKLLKAKLIRLEEEKREAESIKAYDDKSKIGFGSQIRSYVLQPYTLVKDLRTGYET 303 Query: 333 TSPSDVLDGDLDDFMKATLAIK 354 +P VLDGDLD F+ A L +K Sbjct: 304 GNPRAVLDGDLDGFINAYLRMK 325 >gi|314923649|gb|EFS87480.1| peptide chain release factor 2 [Propionibacterium acnes HL001PA1] gi|314967087|gb|EFT11186.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA2] gi|315092708|gb|EFT64684.1| peptide chain release factor 2 [Propionibacterium acnes HL060PA1] gi|315103819|gb|EFT75795.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA2] gi|327327221|gb|EGE68997.1| peptide chain release factor 2 [Propionibacterium acnes HL103PA1] Length = 371 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 2/329 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 342 >gi|75908996|ref|YP_323292.1| peptide chain release factor 2 [Anabaena variabilis ATCC 29413] gi|75702721|gb|ABA22397.1| bacterial peptide chain release factor 2 (bRF-2) [Anabaena variabilis ATCC 29413] Length = 292 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 139/281 (49%), Positives = 197/281 (70%), Gaps = 5/281 (1%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLEL E D ++LQE + ++ +++ + + LLSG D+ A L ++AGAGGT++Q Sbjct: 4 LLEL---ETDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMYTRWAE + +K E +G+EAGIKSATL I G AYG+L+ E G HRLV Sbjct: 61 DWAFMLLRMYTRWAEDQGYKVALAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+++N +R TSF+ + V P +D++++++I + D I T R+ G GGQ+VN ++AVR Sbjct: 121 RISPFNANGKRQTSFAGVEVMPQLDNTVQLDIPDKDLEITTTRSGGKGGQNVNKVETAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310 + H+PTG+ V+C +ERSQ +NK +A L+AKL + + QK +EIA I E WG Sbjct: 181 VVHLPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQI-RGDMVEASWGN 239 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRTN E T+ +DV++G+LD F++A L Sbjct: 240 QIRNYVFHPYQMVKDLRTNAETTAIADVMNGELDMFIQAYL 280 >gi|33239657|ref|NP_874599.1| peptide chain release factor 2 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237182|gb|AAP99251.1| Protein chain release factor B [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 356 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 145/320 (45%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W + +A+ MR+ + + ++ + + D + LEL E D +++E L Sbjct: 25 PDFWNDQQKARKQMRQLDEVKDQLTKLANWNAAIEDAKVSLELYELEPDNEMIEEAQIGL 84 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++K E++ + E LLSG D A L ++AGAGGT++QDWA MLLRMY RWAE K Sbjct: 85 CQLKTELDLWELERLLSGPYDKEGAVLAINAGAGGTDAQDWAQMLLRMYMRWAESHGMKV 144 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRLVRISP+++N +R TSF+ I V Sbjct: 145 ILSELSEGEEAGIKSATIEIEGRYAYGYLQNEKGTHRLVRISPFNANGKRQTSFAGIEVM 204 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +++ + +EI E D + T R+ GAGGQ+VN ++AVRI HIPTG+ V+C QERSQ +N Sbjct: 205 PQLEEDVHLEIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQN 264 Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +A +L+AKL + ++R EIA+I E WG QIR+YV PYQMVKDLR+ E Sbjct: 265 KEKAMALLKAKLMIIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVFHPYQMVKDLRSGTE 323 Query: 332 KTSPSDVLDGDLDDFMKATL 351 V++GDLD F+++ L Sbjct: 324 SNDVESVMNGDLDLFIQSLL 343 >gi|223940442|ref|ZP_03632294.1| peptide chain release factor 2 [bacterium Ellin514] gi|223890887|gb|EEF57396.1| peptide chain release factor 2 [bacterium Ellin514] Length = 384 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 160/354 (45%), Positives = 221/354 (62%), Gaps = 7/354 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+R GG FD N +RL L++ W N +A+ L+ E L + + + Sbjct: 16 LARNWPTYGGFFDVANVQKRLGELDSLMAGESFWSNRDQAQKLIDESNSLRKKVEPLLKA 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + +L D +++ELA E + +D L E+E + + L+G D N+ L Sbjct: 76 EKQLEDYKVMIELAEAEPAAEQEKYQNDVDRELVVFNKELENLELKVFLNGPHDKNNCIL 135 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 ++AGAGGTES DWANMLLRMY RWAE R ++ E + GE AGIKSATLLI G NAYG Sbjct: 136 SINAGAGGTESCDWANMLLRMYQRWAELRGWQVEVTDALPGETAGIKSATLLISGENAYG 195 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 + K E+GVHRLVRISP+DSN RRHTSF+S+ +++ EI I ++ +DT+R+ G G Sbjct: 196 FCKAERGVHRLVRISPFDSNKRRHTSFASVDAIAEIEEEGEIAIPPNEFHVDTFRSGGKG 255 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY--ELELQKREEIAN 297 GQ+VN ++AVRITHIPTG+VV Q +RSQH+N+A A +L ++++ L+ QK+E Sbjct: 256 GQNVNKVETAVRITHIPTGLVVASQTQRSQHQNRATAMKLLLSRIFAQRLDAQKQEMERF 315 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GE K + WG QIRSYV QPY+MVKDLRT +E + V+DGDLD ++ L Sbjct: 316 YGE--KGSVSWGNQIRSYVFQPYRMVKDLRTGVETSDVQGVMDGDLDPYVNGWL 367 >gi|213622420|ref|ZP_03375203.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 240 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 140/221 (63%), Positives = 169/221 (76%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 5 LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 64 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ E GVHRLV Sbjct: 65 DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 124 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 125 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 184 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 ITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ Sbjct: 185 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKK 225 >gi|30692908|ref|NP_851096.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana] gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana] gi|21436317|gb|AAM51328.1| putative translation releasing factor RF-2 [Arabidopsis thaliana] gi|21536944|gb|AAM61285.1| translation releasing factor RF-2 [Arabidopsis thaliana] gi|332006668|gb|AED94051.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana] Length = 456 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 149/336 (44%), Positives = 218/336 (64%), Gaps = 7/336 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q ++ L +K D W + +A+ + L + + + E + + D +++L E D Sbjct: 109 QEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKLTEEMD 168 Query: 81 --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D S+L+E ++ + ++ + LLSG D A + + AGAGGT++QDWA+MLL Sbjct: 169 STDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLL 228 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G AYG++ GE+G HR+VR SP++S Sbjct: 229 RMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNS 288 Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 R TSFS + V P++ ++++ IEI E D I RA G GGQ+VN ++AVRITHIPT Sbjct: 289 KGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPT 348 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315 GV V+C +ERSQ NK +A L+AKL + E Q+ EI I G++ K E WG+QIR+Y Sbjct: 349 GVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDAVKAE--WGQQIRNY 406 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V PY++VKD+RT E + + V+DGDLD F+KA L Sbjct: 407 VFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYL 442 >gi|282853672|ref|ZP_06263009.1| peptide chain release factor 2 [Propionibacterium acnes J139] gi|282583125|gb|EFB88505.1| peptide chain release factor 2 [Propionibacterium acnes J139] gi|314983205|gb|EFT27297.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA3] gi|315092426|gb|EFT64402.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA4] Length = 368 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 2/329 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 13 LDASLSSIENVLDPEAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 73 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 133 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 311 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 339 >gi|314986213|gb|EFT30305.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA2] Length = 371 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 2/329 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 136 SEAGGVDASDFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 342 >gi|30692913|ref|NP_851097.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|13568392|emb|CAC36322.1| translation releasing factor2 [Arabidopsis thaliana] gi|332006670|gb|AED94053.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana] Length = 455 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 149/336 (44%), Positives = 218/336 (64%), Gaps = 7/336 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q ++ L +K D W + +A+ + L + + + E + + D +++L E D Sbjct: 108 QEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKLTEEMD 167 Query: 81 --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D S+L+E ++ + ++ + LLSG D A + + AGAGGT++QDWA+MLL Sbjct: 168 STDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLL 227 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G AYG++ GE+G HR+VR SP++S Sbjct: 228 RMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNS 287 Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 R TSFS + V P++ ++++ IEI E D I RA G GGQ+VN ++AVRITHIPT Sbjct: 288 KGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPT 347 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315 GV V+C +ERSQ NK +A L+AKL + E Q+ EI I G++ K E WG+QIR+Y Sbjct: 348 GVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDAVKAE--WGQQIRNY 405 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V PY++VKD+RT E + + V+DGDLD F+KA L Sbjct: 406 VFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYL 441 >gi|195941813|ref|ZP_03087195.1| peptide chain release factor 2 [Borrelia burgdorferi 80a] Length = 282 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 143/264 (54%), Positives = 192/264 (72%), Gaps = 10/264 (3%) Query: 97 LEVEY----KQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 LE+E+ KQ++ LL+ E D+N+A+L +H+GAGGTE+ DW ML RMY+R+AE+ Sbjct: 14 LEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 73 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RISP+D+ +RHTSF+ Sbjct: 74 KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 132 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++V PV+DD IEI I D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R Sbjct: 133 SVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 192 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK A +L+++LYE K +E + +K EI WG QIRSYV QPY +VKD R Sbjct: 193 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 252 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T E ++ + V+DG++D+F++ L Sbjct: 253 TKFENSNTTSVMDGNIDNFIEEYL 276 >gi|50842838|ref|YP_056065.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202] gi|289426937|ref|ZP_06428661.1| peptide chain release factor 2 [Propionibacterium acnes J165] gi|295130890|ref|YP_003581553.1| peptide chain release factor 2 [Propionibacterium acnes SK137] gi|81611548|sp|Q6A808|RF2_PROAC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|50840440|gb|AAT83107.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202] gi|289159877|gb|EFD08057.1| peptide chain release factor 2 [Propionibacterium acnes J165] gi|291375816|gb|ADD99670.1| peptide chain release factor 2 [Propionibacterium acnes SK137] gi|332675771|gb|AEE72587.1| peptide chain release factor 2 [Propionibacterium acnes 266] Length = 368 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 2/329 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 13 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 73 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 133 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 311 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 339 >gi|326771885|ref|ZP_08231170.1| peptide chain release factor 2 [Actinomyces viscosus C505] gi|326638018|gb|EGE38919.1| peptide chain release factor 2 [Actinomyces viscosus C505] Length = 373 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 151/358 (42%), Positives = 221/358 (61%), Gaps = 6/358 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D ++ELA EE+ IL E +L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGEDAAEILAEAEMDLAAISKDLSDLEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ + + L EEAG+KS T + P AY Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L L+++EE A Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRL--LLLKQQEEDAKK 308 Query: 299 GE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 E + + WG Q+RSYVL PYQMVKDLRTN E +P V DGD+D F+ A + +K Sbjct: 309 KELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|297805172|ref|XP_002870470.1| HCF109 [Arabidopsis lyrata subsp. lyrata] gi|297316306|gb|EFH46729.1| HCF109 [Arabidopsis lyrata subsp. lyrata] Length = 453 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 149/336 (44%), Positives = 218/336 (64%), Gaps = 7/336 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q ++ L +K D W + +A+ + L + + + E + + D +++L E D Sbjct: 106 QEIANLESKATDTSFWDDRTKAQETLSALNDLKDRMRLLSEFKTMVEDAETIVKLTEEMD 165 Query: 81 --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D S+L+E ++ + ++ + LLSG D A + + AGAGGT++QDWA+MLL Sbjct: 166 STDVSLLEEAMGIIKELNKSLDRFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLL 225 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G AYG++ GE+G HR+VR SP++S Sbjct: 226 RMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNS 285 Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 R TSFS + V P++ ++++ IEI E D I RA G GGQ+VN ++AVRITHIPT Sbjct: 286 KGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPT 345 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315 GV V+C +ERSQ NK +A L+AKL + E Q+ EI I G++ K E WG+QIR+Y Sbjct: 346 GVAVRCTEERSQLANKTRALIRLKAKLLVIAEEQRATEIKEIRGDAVKAE--WGQQIRNY 403 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V PY++VKD+RT E + + V+DGDLD F+KA L Sbjct: 404 VFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYL 439 >gi|289425462|ref|ZP_06427239.1| peptide chain release factor 2 [Propionibacterium acnes SK187] gi|289154440|gb|EFD03128.1| peptide chain release factor 2 [Propionibacterium acnes SK187] gi|313771879|gb|EFS37845.1| peptide chain release factor 2 [Propionibacterium acnes HL074PA1] gi|313807112|gb|EFS45607.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA2] gi|313809604|gb|EFS47340.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA1] gi|313813321|gb|EFS51035.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA1] gi|313819308|gb|EFS57022.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA2] gi|313819957|gb|EFS57671.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA1] gi|313823250|gb|EFS60964.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA2] gi|313824962|gb|EFS62676.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA1] gi|313829923|gb|EFS67637.1| peptide chain release factor 2 [Propionibacterium acnes HL007PA1] gi|313833072|gb|EFS70786.1| peptide chain release factor 2 [Propionibacterium acnes HL056PA1] gi|314924796|gb|EFS88627.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA3] gi|314960646|gb|EFT04748.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA2] gi|314972908|gb|EFT17005.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA1] gi|314975668|gb|EFT19763.1| peptide chain release factor 2 [Propionibacterium acnes HL045PA1] gi|314978052|gb|EFT22146.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA2] gi|314984148|gb|EFT28240.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA1] gi|314989571|gb|EFT33662.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA3] gi|315080944|gb|EFT52920.1| peptide chain release factor 2 [Propionibacterium acnes HL078PA1] gi|315084867|gb|EFT56843.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA2] gi|315086040|gb|EFT58016.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA3] gi|315088241|gb|EFT60217.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA1] gi|315095727|gb|EFT67703.1| peptide chain release factor 2 [Propionibacterium acnes HL038PA1] gi|315105991|gb|EFT77967.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA1] gi|327327935|gb|EGE69709.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA3] gi|327330072|gb|EGE71825.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA2] gi|327442693|gb|EGE89347.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA1] gi|327443908|gb|EGE90562.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA2] gi|327443976|gb|EGE90630.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA2] gi|328754956|gb|EGF68572.1| peptide chain release factor 2 [Propionibacterium acnes HL020PA1] gi|328761406|gb|EGF74932.1| peptide chain release factor 2 [Propionibacterium acnes HL099PA1] Length = 371 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 2/329 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 342 >gi|33866841|ref|NP_898400.1| peptide chain release factor 2 [Synechococcus sp. WH 8102] gi|81573750|sp|Q7U3W6|RF2_SYNPX RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|33639442|emb|CAE08826.1| peptide chain release factor RF-2 [Synechococcus sp. WH 8102] Length = 374 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 149/323 (46%), Positives = 208/323 (64%), Gaps = 8/323 (2%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETS 89 P W + A+ MR LD + ++++ D + D LEL E D +L E Sbjct: 43 PDFWDDQQAAQKQMR---RLDEVKAQLQQLADWGGAVDDAKATLELYELEPDEEMLTEAQ 99 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L +++ ++ + E LLSG+ D A L ++AGAGGT++QDWA MLLRMYTRWAE Sbjct: 100 EGLNQLRQGLDRWELERLLSGDYDKEGAVLTINAGAGGTDAQDWAQMLLRMYTRWAEDHG 159 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E+ +GEEAGIKS T+ ++G AYG+L+ E+G HRLVRISP+++N +R TSF+ I Sbjct: 160 MKVTVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVRISPFNANDKRQTSFAGI 219 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D+ ++I+I E D + T R+ GAGGQ+VN ++AVRI HIPTG+ V+C QERSQ Sbjct: 220 EVMPKIDEEVDIDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQ 279 Query: 270 HKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 +NK +A +L+AKL + ++R EIA+I E WG QIR+YV PYQMVKDLRT Sbjct: 280 LQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVFHPYQMVKDLRT 338 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 + E V+DG LD F+ A+L Sbjct: 339 SEETNDVQAVMDGALDPFIDASL 361 >gi|68171151|ref|ZP_00544559.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa] gi|67999421|gb|EAM86062.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa] Length = 221 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 131/220 (59%), Positives = 168/220 (76%), Gaps = 1/220 (0%) Query: 136 MLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML RMY RWAE FKTE + DGEE G+KSAT+ + G NAYGW K E G+HRLVRIS Sbjct: 1 MLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYGWAKTESGIHRLVRIS 60 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P++SN++RHT+FSSI V PV+++ IEI + D RIDTYRASGAGGQHVN T+SAVRITH Sbjct: 61 PFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITH 120 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IP+G+VVQCQ RSQH+N A+A N+L+++LY+L+LQ++E+ + + IGWG QIRS Sbjct: 121 IPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRS 180 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 YV+ PYQMVKD+RT E + + VLDG+LD F+ + L K Sbjct: 181 YVMHPYQMVKDIRTGHEIGNVNSVLDGNLDSFIISALTTK 220 >gi|216264821|ref|ZP_03436813.1| peptide chain release factor 2 [Borrelia burgdorferi 156a] gi|226320754|ref|ZP_03796310.1| peptide chain release factor 2 [Borrelia burgdorferi 29805] gi|215981294|gb|EEC22101.1| peptide chain release factor 2 [Borrelia burgdorferi 156a] gi|226233809|gb|EEH32534.1| peptide chain release factor 2 [Borrelia burgdorferi 29805] Length = 269 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 142/264 (53%), Positives = 192/264 (72%), Gaps = 10/264 (3%) Query: 97 LEVEY----KQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 +E+E+ KQ++ LL+ E D+N+A+L +H+GAGGTE+ DW ML RMY+R+AE+ Sbjct: 1 MEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RISP+D+ +RHTSF+ Sbjct: 61 KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++V PV+DD IEI I D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R Sbjct: 120 SVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK A +L+++LYE K +E + +K EI WG QIRSYV QPY +VKD R Sbjct: 180 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T E ++ + V+DG++D+F++ L Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYL 263 >gi|317968157|ref|ZP_07969547.1| peptide chain release factor 2 [Synechococcus sp. CB0205] Length = 356 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 147/340 (43%), Positives = 212/340 (62%), Gaps = 2/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD R L P W + A+ MR+ + + + + + + D Sbjct: 5 VFDVAALKARQQDLEQLASQPDFWDDQKLAQSKMRQLDEVKAQLEQLSQWKGAVADAEAT 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +E+ E D +L E+ L++++ +++ + E LLSG D A + ++AGAGGT++QD Sbjct: 65 VEIYGLEPDDELLSESDAALKKLRADLDRWELERLLSGTYDKEGAVISINAGAGGTDAQD 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML+RMYTRWAE K E+ DGEEAGIKS T+ I+G AYG+L+ E+G HRLVR Sbjct: 125 WALMLMRMYTRWAEDHGMKVTVDELSDGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++AVRI Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 HIPTG+ V+C QERSQ +NK +A +L AKL + ++R EIA+I E WG Q Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQ 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PYQMVKDLRT E T V+DGDLD F+++ L Sbjct: 304 IRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343 >gi|270307933|ref|YP_003329991.1| peptide chain release factor 2 [Dehalococcoides sp. VS] gi|270153825|gb|ACZ61663.1| peptide chain release factor 2 [Dehalococcoides sp. VS] Length = 357 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 156/354 (44%), Positives = 217/354 (61%), Gaps = 14/354 (3%) Query: 7 LNCLGGLF----DWDNAVQRLSF--LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +N F D+D + + L L + P WQ+ A+ +M++ + Sbjct: 1 MNLRAAFFLIWCDFDVSAKELEITELENASASPDFWQDQQNAQRVMKKLAANKRTSELWR 60 Query: 61 EIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 ++ R+ D L ELA L +D S+ E + + E+ + SG+ D+ +A L Sbjct: 61 GLERRVND---LTELAVLSYEDPSLSNEIEHEISGLTAELNSLEVGLAFSGQYDNRNALL 117 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 VHAGAGG ESQDWA MLLRM+ RWAEK+ F E L+ GEEAG+KSATL I G AYG Sbjct: 118 TVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEILDQSPGEEAGVKSATLQIDGEYAYG 177 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E GVHRL+R+SP+D++ RHTSF+ + + P +DS++I+I D +I+ +R+SG G Sbjct: 178 FLKSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIEMFRSSGPG 237 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI 298 GQ+V +AVRITHIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR EE A + Sbjct: 238 GQNVQKVSTAVRITHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKL 297 Query: 299 -GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GE E WG QIRSYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 298 KGERISAE--WGNQIRSYVLHPYKMVKDHRTDYEVGNAETVLEGELDGFINAYL 349 >gi|324997823|ref|ZP_08118935.1| peptide chain release factor 2 [Pseudonocardia sp. P1] Length = 368 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 153/349 (43%), Positives = 220/349 (63%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D Q + L+ + P LW +V A+ + + + + ++ Sbjct: 12 LDTTLSSIEAVADVPRLRQEIEELSEQAGRPDLWDDVEAAQKITSRLAYAQGDLRRLDDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA +E D + + + + R++ E+ + +LLSGE D +A + + Sbjct: 72 RRRLDDLPVLYELAEDEGDQAAVADADADRARLRSEIASLEVRTLLSGEYDEREALVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ + T+ E EEAGIKSAT + P A+G L Sbjct: 132 SEAGGIDAADFAEMLLRMYLRWAERHGYGTDVFETSYAEEAGIKSATFAVHAPYAFGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ S +EI E D R+D +RASG GGQ Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESSDHVEIDEKDLRVDVFRASGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A +L+AKL + Q+ E+ + + S Sbjct: 252 VNTTDSAVRLTHIPTGIVVACQNERSQLQNKASAMVVLQAKLLDRRRQEERELMDSFKDS 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+R+YVL PYQ+VKDLRT E+ +PS VLDG++DDF++A + Sbjct: 312 GS--SWGNQMRNYVLHPYQLVKDLRTEHEEGNPSQVLDGEIDDFIEAGI 358 >gi|260102492|ref|ZP_05752729.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM 20075] gi|260083697|gb|EEW67817.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM 20075] Length = 332 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 154/315 (48%), Positives = 203/315 (64%), Gaps = 6/315 (1%) Query: 37 QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96 Q +I L++E++ SF+K QD D L LEL E D + QE +L+ ++ Sbjct: 14 QKLISDNNLLKEKRD-----SFLKLQQD-YEDELTALELLRAEPDADLQQEVETDLKDLQ 67 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + LLSG+ DS++A LE+H GAGGTE+ DW ML RMY R+ + FK E + Sbjct: 68 EAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAGFKFEIND 127 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GEEAG+KS ++ I G NAYG LK E GVHRLV ISP+D+ RRHTSF+S+ V P +D Sbjct: 128 YEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVIISPFDAAKRRHTSFASVEVIPEID 187 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 DSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ +N+ A Sbjct: 188 DSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQLQNRETA 247 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT E + Sbjct: 248 MNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTGYETADVN 307 Query: 337 DVLDGDLDDFMKATL 351 V+DG L F+ + L Sbjct: 308 GVMDGKLQPFIYSYL 322 >gi|269215856|ref|ZP_06159710.1| peptide chain release factor 2 [Slackia exigua ATCC 700122] gi|269130806|gb|EEZ61882.1| peptide chain release factor 2 [Slackia exigua ATCC 700122] Length = 364 Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 149/347 (42%), Positives = 217/347 (62%), Gaps = 4/347 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +L G + +RL L+ P W + A+ + + + + + Sbjct: 11 ELAERLAAARGYLHIEENERRLHDLDAVISQPGFWDDAQAAQATSKRASDIRSTLDEYRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLE 120 L D LEL +EEDD ++ D L+ + ++ + ES + +D+ DA + Sbjct: 71 ACATLEDARAALEL-IEEDDAFAVE--FDELRAGLSSALDRMEVESWFTDPSDACDAIVS 127 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 V+ G+GG E+QDW +ML RMY R+AEK+ +K + L++ GE G+ A + I+G NA+G Sbjct: 128 VNPGSGGLEAQDWTDMLYRMYVRYAEKKGWKVKLLDVVPGEVIGLDRAVVQIEGKNAFGM 187 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHRLVRISP D RR T+F+ + V PVV+D IE+EI+ SD R+D YR+SG GG Sbjct: 188 LRSEHGVHRLVRISPTDDKKRRQTTFAGVEVLPVVEDDIEVEINPSDVRVDVYRSSGPGG 247 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A+ +LRAKLYELE QKRE+ + Sbjct: 248 QCVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKESAFKVLRAKLYELERQKREDEMDALR 307 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K + +G QIR+YVL PYQ+VKD+R+ +E + VLDG +D+F+ Sbjct: 308 GEKRDNSFGSQIRNYVLYPYQLVKDVRSGVETGNVDAVLDGQIDEFV 354 >gi|297564871|ref|YP_003683843.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946] gi|296849320|gb|ADH62335.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946] Length = 375 Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 162/354 (45%), Positives = 218/354 (61%), Gaps = 9/354 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ L G D RL L K DPHLW N EAK + +E L A+ + + Sbjct: 16 LQHRLDALRGYLDIAGKESRLRELEVKLNDPHLWDNPTEAKAISQEATRLRKAVENYRRL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L+ L L ++ + +Q D R +LE Y Q +LLS N A + + Sbjct: 76 ESDL-QGLLELWPELSAEERAQMQPELDKAGR-ELEDLYHQ--TLLSFPYAENAAIVTIK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+ DWA ML RMYTR+AE+ FK E +++ G EAGI A +++G AYG L Sbjct: 132 PGAGGTEACDWAEMLYRMYTRFAERHGFKVEVVDVEPGAEAGIDLAQFIVRGEYAYGLLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+++ +R TSF+++ V P VD+S+E+ I+ D RID R+ G GGQ Sbjct: 192 AEAGVHRLVRPSPFNAQGKRQTSFAALEVMPEVDESVEVAINPEDLRIDVMRSQGKGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GE 300 VNTTDSAVR+ H+PTG++V+CQ RSQ KNK A N+LR+KL+E+E +K+ EE+A + GE Sbjct: 252 VNTTDSAVRVVHLPTGIMVKCQITRSQQKNKELAMNILRSKLFEIEWKKKQEELARLKGE 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S E WG QIRSYVL Q VKD RT + P +VLDGDL++ + A L K Sbjct: 312 SRPNE--WGSQIRSYVLDK-QYVKDHRTGEMRHDPENVLDGDLENLVWAGLEWK 362 >gi|146300308|ref|YP_001194899.1| peptide chain release factor 2 [Flavobacterium johnsoniae UW101] gi|146154726|gb|ABQ05580.1| bacterial peptide chain release factor 2 (bRF-2) [Flavobacterium johnsoniae UW101] Length = 254 Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 128/247 (51%), Positives = 182/247 (73%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 +LS E DS A +++ AGAGGTES DWA ML+RMY W E +K + L +G+ AGIK Sbjct: 1 MLSDEGDSLSAVVQITAGAGGTESCDWAGMLMRMYMMWGESYGYKIKELNFQEGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 + TL +G ++G+LKGE GVHRLVRISP+DSN++RHTSF S++VYP+VDDSIEI+I+ + Sbjct: 61 TVTLEFEGDYSFGYLKGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDSIEIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D I T R+SGAGGQ+VN ++ V++ H PTG+ +QC + RSQ N+ +A MLR++LYE Sbjct: 121 DIEITTSRSSGAGGQNVNKVETKVQLVHKPTGIQIQCSETRSQQDNRQRAMQMLRSQLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +EL+K++ E+ K +I WG QIR+YV+QPY++VKD+RT E + V++G++D F Sbjct: 181 IELKKQQAQRADIEAGKMKIEWGSQIRNYVMQPYKLVKDVRTGYETSDVDGVMNGNIDAF 240 Query: 347 MKATLAI 353 +KA L + Sbjct: 241 LKAYLMM 247 >gi|116671212|ref|YP_832145.1| peptide chain release factor 2 [Arthrobacter sp. FB24] gi|229576665|sp|A0JYC5|RF2_ARTS2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116611321|gb|ABK04045.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter sp. FB24] Length = 371 Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 138/326 (42%), Positives = 210/326 (64%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ + +P+LW + A+ + H + + + + R+ D +L+EL +EDD + Sbjct: 36 LSERAGEPNLWDDPAAAQKITSRLSHRQSELERLNTLVSRIDDLEVLVELGQDEDDADSM 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L+ I+ ++ + +LLSGE D +A + + AGAGG ++ D+A MLLRMY RWA Sbjct: 96 GEAAAELESIRKSLKDLEVVTLLSGEFDEREAVVTIRAGAGGVDAADFAEMLLRMYLRWA 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ + T ++ EEAG+KSAT + P AYG L E G HRLVRISP+D+ RR TS Sbjct: 156 ERHGYPTTIMDTSYAEEAGLKSATFEVNAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P+++ + I+I +++ R+D +R+SG GGQ VNTTDSAVR+THIPTG VV Q Sbjct: 216 FAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQSVNTTDSAVRLTHIPTGTVVSMQN 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 E+SQ +N+A A +L+++L L+ +++E+ + + WG Q+RSYVL PYQMVKD Sbjct: 276 EKSQLQNRAAALRVLQSRLLLLK-KEQEDAEKKAFAGDVKASWGDQMRSYVLNPYQMVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT E + S V DG++DDF+ A + Sbjct: 335 LRTEHEVGNTSAVFDGEIDDFIDAGI 360 >gi|184200580|ref|YP_001854787.1| peptide chain release factor 2 [Kocuria rhizophila DC2201] gi|183580810|dbj|BAG29281.1| peptide chain release factor 2 [Kocuria rhizophila DC2201] Length = 372 Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 140/345 (40%), Positives = 221/345 (64%), Gaps = 11/345 (3%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + + + D + ++ ++ L + P LW N EA+ + + H + + +++I+ R+ Sbjct: 18 DSVAAVSDAEMLLKEITELEQQAAAPDLWDNPDEAQKVTSQLSHKQSKVDRLRKIESRID 77 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D +++ELA +EDD ++ L I+ + + ++LL+GE D +A + + +GAGG Sbjct: 78 DLEVMVELAEDEDDQETRDASATELTSIQKALSELEIQTLLAGEYDEREAVVTIRSGAGG 137 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ++ D+A +L+RMY RWAE+ + T+ L+ EEAG+KSAT +K P A+G L E G Sbjct: 138 VDAADFAEILMRMYLRWAERHGYPTKVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGT 197 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D+ RR TSF+++ V P+++ +EI E++ ++D +R+SG GGQ VNTTD Sbjct: 198 HRLVRISPFDNQGRRQTSFAAVEVIPLIESDDTVEIPETELKVDVFRSSGPGGQSVNTTD 257 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-----ELELQKREEIANIGESS 302 SAVR+THIPTG+VV Q E+SQ +N+A A +L+++L E + +K+E ++ S Sbjct: 258 SAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRQEEADAKKKEMAGDVKAS- 316 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 WG Q+RSYVL PYQMVKDLRTN E+ +PS V DG +D F+ Sbjct: 317 -----WGDQMRSYVLNPYQMVKDLRTNYEEGNPSSVFDGGIDSFI 356 >gi|91215788|ref|ZP_01252758.1| putative peptide chain release factor [Psychroflexus torquis ATCC 700755] gi|91186254|gb|EAS72627.1| putative peptide chain release factor [Psychroflexus torquis ATCC 700755] Length = 316 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 137/290 (47%), Positives = 205/290 (70%), Gaps = 7/290 (2%) Query: 65 RLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +L ++L +L EE D S I ++ ++ L+ I E +F+++LS E+D A L++ Sbjct: 19 QLVEDLNVLFEFFEEGDVSEDEIKEKYAEALELI----EDLEFKNMLSEESDPLTAILQI 74 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTES DWA ML+RMY WA++R FK L G+ AGIK+ TL I+G A+GWL Sbjct: 75 TAGAGGTESCDWAEMLMRMYIMWADRRNFKIRELNHQGGDVAGIKTVTLEIEGEYAFGWL 134 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ S+ + + R+ GAGGQ Sbjct: 135 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPSEIKWEFARSGGAGGQ 194 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++ +TH P+G+V+ + RSQ +N+ +A ML+++LYE+EL+K++ + ES Sbjct: 195 NVNKVETKAILTHYPSGIVIHNSETRSQLENRQKAMQMLKSQLYEIELKKQQAARSEIES 254 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K I WG QIR+YV+ PY++VKD+RT E + D+++G +D F+K+ L Sbjct: 255 EKKSIEWGSQIRNYVMHPYKLVKDVRTGFESGNVDDIMNGHIDSFLKSYL 304 >gi|260904322|ref|ZP_05912644.1| peptide chain release factor 2 [Brevibacterium linens BL2] Length = 372 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 143/342 (41%), Positives = 213/342 (62%), Gaps = 3/342 (0%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D DN ++ + + P W + A+ + H + +++ +R+ D +++E Sbjct: 24 DLDNLRSEVAEMTEQASAPSFWDDPDSAQKISATLSHKQGTLEKLEKFGERIDDAELIIE 83 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++ +E D E +L+++ ++ + +LL+ E D A + V +GAGG ++ DWA Sbjct: 84 MSEDEGDEDSKVEAERDLKKLHDQLAELEISTLLNHEYDERSAVVTVRSGAGGDDATDWA 143 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML+RMY RWAE R + + L+ E AGIKSAT+ + P AYG L E G HRLVRIS Sbjct: 144 QMLIRMYVRWAENRGYNVQQLDTSYAEGAGIKSATIQVNAPYAYGTLSVEAGTHRLVRIS 203 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D+ RR TSF+++ V P+++ + +EI E+D RID YR+SG GGQ VNTTDSAVRITH Sbjct: 204 PFDNQGRRQTSFAAVEVVPLIESTDHVEIDENDLRIDVYRSSGPGGQSVNTTDSAVRITH 263 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIR 313 PTGVVV Q E+SQ +N+ A +L+++L L+L+++EE A E + + WG Q+R Sbjct: 264 APTGVVVSMQNEKSQIQNREAAMRVLQSRL--LDLKRKEEAAEKKELAGDIKASWGDQMR 321 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 SYV PYQMVKDLRT E +PS+V DGDLD ++A + +K Sbjct: 322 SYVTHPYQMVKDLRTGYEVNNPSNVFDGDLDGLIEAGIRWRK 363 >gi|313792395|gb|EFS40490.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA1] gi|313801469|gb|EFS42718.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA2] gi|313838232|gb|EFS75946.1| peptide chain release factor 2 [Propionibacterium acnes HL086PA1] gi|314963179|gb|EFT07279.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA1] gi|315078242|gb|EFT50285.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA2] gi|327453496|gb|EGF00151.1| peptide chain release factor 2 [Propionibacterium acnes HL092PA1] Length = 371 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 205/329 (62%), Gaps = 2/329 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPAAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 342 >gi|183602511|ref|ZP_02963876.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis HN019] gi|219683556|ref|YP_002469939.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis AD011] gi|241190585|ref|YP_002967979.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195991|ref|YP_002969546.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218152|gb|EDT88798.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis HN019] gi|219621206|gb|ACL29363.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis AD011] gi|240248977|gb|ACS45917.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250545|gb|ACS47484.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178324|gb|ADC85570.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium animalis subsp. lactis BB-12] gi|295793572|gb|ADG33107.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis V9] Length = 377 Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 142/326 (43%), Positives = 203/326 (62%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + P LW + A+ +M + + + + RL D L+EL EE+D L Sbjct: 36 LEQQASAPGLWDDSEHAQKVMSQLSACQSQLKHLSSAASRLDDVATLIELGQEENDADTL 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E ++ I+ +++ + E+L+ GE DS A + + +GAGG ++ D+A MLLRMY RWA Sbjct: 96 HEAQTEIESIQKDLDQMEIETLMDGEYDSRSAVVTIRSGAGGVDAADFAQMLLRMYLRWA 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ +K + ++ EEAGIKSAT I P AYG + E G HRLVRISP+D+ RR TS Sbjct: 156 ERNGYKAKVMDTSYAEEAGIKSATFQIDAPYAYGRMSVEGGTHRLVRISPFDNQGRRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P+V+ + IE+ +S+ R+DTY ASG GGQ VNTT SAVRITH+PTG+VV Q Sbjct: 216 FAAVEVVPLVEATDHIEVPDSEIRVDTYCASGPGGQGVNTTYSAVRITHLPTGIVVTMQD 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ +N+A A +L+++L L + E + + WG Q+RSYVL PYQMVKD Sbjct: 276 ERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT E + V DGD+D+F++A + Sbjct: 335 LRTGCETSQTQAVFDGDIDEFIQAGI 360 >gi|72383384|ref|YP_292739.1| peptide chain release factor 2 [Prochlorococcus marinus str. NATL2A] gi|72003234|gb|AAZ59036.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus marinus str. NATL2A] Length = 313 Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 140/280 (50%), Positives = 193/280 (68%), Gaps = 2/280 (0%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +EL + D IL E + L+++K E+E + E LLSG D A L ++AGAGGT++QD Sbjct: 28 VELYELDPDEEILSEAHNGLEQLKQELERWETERLLSGIYDKEGAVLSINAGAGGTDAQD 87 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRLVR Sbjct: 88 WAQMLLRMYTRWAENNGMKVSINELSEGEEAGIKSVTIEIEGVYAYGFLQNEKGTHRLVR 147 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V P +D+ +E+EI E D I T R+ GAGGQ+VN ++AVRI Sbjct: 148 ISPFNANGKRQTSFAGVEVMPKLDEEVELEIPEKDLEITTSRSGGAGGQNVNKVETAVRI 207 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 H+PTG+ V+C QERSQ +NK +A +L++KL + +++R EIA+I E WG Q Sbjct: 208 LHVPTGIAVRCTQERSQLQNKDKAMALLKSKLMVIAVEQRAAEIADI-RGDIVEAAWGNQ 266 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PYQMVKDLRT E T V++G +D F+++ L Sbjct: 267 IRNYVFHPYQMVKDLRTEQETTDVDSVMNGKIDIFIQSLL 306 >gi|166363701|ref|YP_001655974.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843] gi|166086074|dbj|BAG00782.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843] Length = 330 Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 144/321 (44%), Positives = 216/321 (67%), Gaps = 3/321 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W N+ A+ ++E +++ + +L D ++EL E D ++L+E +DNL Sbjct: 5 PTFWDNLDTAQKTLQELNECKSSLETYQGWCGQLEDTKAIIELLELESDRTLLEEATDNL 64 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++ +++ + + LL+G D+ A L ++AGAGGT++QDW MLLRMY+RWAEK+ +K Sbjct: 65 THLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKV 124 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 EI +G+EAGIKS T+ I G AYG+LKGE+G HRLVRISP+++N +R TSF+ + V Sbjct: 125 TLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 184 Query: 213 PVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P++ DD++ +EI + D I T R+ G GGQ+VN ++AVR+ H+PTG+ V+C QERSQ + Sbjct: 185 PILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQ 244 Query: 272 NKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK +A +L+AKL + Q+ + IA I E WG QIR+YV PYQ+VKDLR+N+ Sbjct: 245 NKEKALALLKAKLLIIAREQQAQAIAEI-RGDMVEAAWGNQIRNYVFHPYQLVKDLRSNV 303 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T + V++GDLD F++A L Sbjct: 304 ETTDVTRVMNGDLDSFIEAYL 324 >gi|254432093|ref|ZP_05045796.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001] gi|197626546|gb|EDY39105.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001] Length = 358 Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 148/340 (43%), Positives = 211/340 (62%), Gaps = 2/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD R L P W + A+ MR+ + + ++ + + D Sbjct: 5 VFDVPALKARQQDLEQLASQPDFWDDQQAAQKQMRQLDDVKAQLEQLERWKAAVSDAEAT 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LEL E D +L+E + L ++ +++ + E LLSG D A L ++AGAGGT++QD Sbjct: 65 LELHELEPDGDLLEEANAGLTSLRGDLDRWELERLLSGPYDKEGAVLTINAGAGGTDAQD 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRWAE E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRLVR Sbjct: 125 WAQMLLRMYTRWAEDHGMTVSVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V P +++ ++++I + D I T R+ GAGGQ+VN ++AVRI Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 HIPTG+ V+C QERSQ +NK +A +L AKL + ++R EIA+I E WG Q Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQ 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PYQ+VKDLRT E T V+DGDLD F+++ L Sbjct: 304 IRNYVFHPYQLVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343 >gi|116074014|ref|ZP_01471276.1| peptide chain release factor 2 [Synechococcus sp. RS9916] gi|116069319|gb|EAU75071.1| peptide chain release factor 2 [Synechococcus sp. RS9916] Length = 356 Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 149/340 (43%), Positives = 209/340 (61%), Gaps = 2/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD R L P W + A+ MR + + + + + + D Sbjct: 5 VFDVPALKARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLEQLNQWKRAVDDADAT 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +EL E D +L E L +++ E++ + E LLSGE D A L ++AGAGGT++QD Sbjct: 65 VELYALEPDDDMLGEAQTGLTQLRTELDRWELERLLSGEYDKEGAVLSINAGAGGTDAQD 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML+RMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRLVR Sbjct: 125 WALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++AVRI Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKIEEDVQLDIPEKDLEITTSRSGGAGGQNVNKVETAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 HIPTG+ V+C QERSQ +NK +A +L AKL + ++R EIA+I E WG Q Sbjct: 245 LHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQ 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PYQMVKDLRT E V+DGDLD F+++ L Sbjct: 304 IRNYVFHPYQMVKDLRTQHETNDVQGVMDGDLDPFIQSLL 343 >gi|116072022|ref|ZP_01469290.1| peptide chain release factor 2 [Synechococcus sp. BL107] gi|116065645|gb|EAU71403.1| peptide chain release factor 2 [Synechococcus sp. BL107] Length = 356 Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 152/337 (45%), Positives = 211/337 (62%), Gaps = 15/337 (4%) Query: 26 LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLEL 75 LN + +D P W + A+ MR LD + +K++ D + D LEL Sbjct: 11 LNARQQDLEQLAAQPDFWNDQQNAQKQMR---RLDEVKAQLKQLADWRSAIDDAKATLEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E D +L E L ++ ++ + E LLSGE D A L ++AGAGGT++QDWA Sbjct: 68 YELEADEDMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQ 127 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 MLLRMYTRWAE + EI +GEEAGIKSAT+ ++G AYG+L+ E+G HRLVRISP Sbjct: 128 MLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRLVRISP 187 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +++N +R TSF+ I V P +++ ++I+I + D + T R+ GAGGQ+VN ++AVRI H+ Sbjct: 188 FNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRIQHL 247 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRS 314 PTG+ V+C QERSQ +NK +A +L+AKL + ++R EIA+I E WG QIR+ Sbjct: 248 PTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRN 306 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YV PYQMVKDLRT E V+DG LD F+ A+L Sbjct: 307 YVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASL 343 >gi|124024969|ref|YP_001014085.1| peptide chain release factor 2 [Prochlorococcus marinus str. NATL1A] gi|123960037|gb|ABM74820.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. NATL1A] Length = 313 Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 142/284 (50%), Positives = 198/284 (69%), Gaps = 5/284 (1%) Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +L L EL L+E+ IL E + L+++K E++ + E LLSG D A L ++AGAGGT Sbjct: 27 SLELYELDLDEE---ILSEAHNGLEKLKQELDRWETERLLSGIYDKEGAVLSINAGAGGT 83 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ++QDWA MLLRMYTRWA+ K E+ +GEEAGIKS T+ I+G AYG+L+ E+G H Sbjct: 84 DAQDWAQMLLRMYTRWADNNGMKVIINELSEGEEAGIKSVTIEIEGVYAYGFLQNEKGTH 143 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+++N +R TSF+ + V P +D+ +E+EI E D I T R+ GAGGQ+VN ++ Sbjct: 144 RLVRISPFNANGKRQTSFAGVEVMPKLDEEVELEIPEKDLEITTSRSGGAGGQNVNKVET 203 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIG 307 AVRI H+PTG+ V+C QERSQ +NK +A +L++KL + L++R EIA+I E Sbjct: 204 AVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSKLMVIALEQRAAEIADI-RGDIVEAA 262 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIR+YV PYQMVKDLRT E T V++G++D F+++ L Sbjct: 263 WGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGEIDIFIQSLL 306 >gi|323466941|gb|ADX70628.1| Peptide chain release factor 2 [Lactobacillus helveticus H10] Length = 332 Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 157/325 (48%), Positives = 207/325 (63%), Gaps = 12/325 (3%) Query: 33 PHLW------QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 P W Q +I L++E++ SF+K QD D L LEL E D + Q Sbjct: 4 PGFWDDQEGAQKLISDNNLLKEKRD-----SFLKLQQD-YEDELTALELLRAEPDADLQQ 57 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E +L+ ++ + + LLSG+ DS++A LE+H GAGGTE+ DW ML RMY R+ + Sbjct: 58 EVETDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCD 117 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 FK E + GEEAG+KS ++ I G NAYG LK E GVHRLVRISP+D+ RRHTSF Sbjct: 118 AAGFKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDATKRRHTSF 177 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q + Sbjct: 178 ASVEVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQ 237 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+ A N LRAKL+ LE +K+++ + + EIGWG QIRSYV PY +VKDL Sbjct: 238 RSQLQNRETAMNELRAKLFHLEEEKKQKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDL 297 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351 RT E + V+DG L F+ + L Sbjct: 298 RTGYETADVNGVMDGKLQPFIYSYL 322 >gi|256826989|ref|YP_003150948.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641] gi|256583132|gb|ACU94266.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641] Length = 364 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 148/328 (45%), Positives = 205/328 (62%), Gaps = 4/328 (1%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QRL+ L+ +T P W ++ A+ + +E + + + L D L+LA ++ Sbjct: 28 QRLAELDQQTAQPGFWDDIDRAQAVSKEASDIRTLLDTYEHAHTLLDDWRCALDLAQDDP 87 Query: 81 DCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 D + Q+ +D L R+ + E ES D D + ++ G+GG E+QDW +ML Sbjct: 88 DFATEAQKAADELSRLLDDFE---IESWFGNRFDEGDCIVTINPGSGGLEAQDWCDMLFH 144 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MYT++AE R +K L+ GE GI+ A+ I+G AYG L+ E GVHRLVRISP D Sbjct: 145 MYTKYAENRGWKVRVLDAPLGEVIGIEHASFQIEGRFAYGMLRSEIGVHRLVRISPTDDK 204 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 RRHT+F+S+ V PV+ D IE+ ++ +D R+D YRASG GGQ VNTTDSAVR+THIPTG Sbjct: 205 KRRHTTFASVEVMPVLPDDIEVNLNPADVRVDVYRASGPGGQCVNTTDSAVRLTHIPTGT 264 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VV CQ ++SQ +NK A+ +LRA+L+ELE +KR+E K E +G QIR+YVL P Sbjct: 265 VVTCQNQKSQLQNKEAAFRILRARLFELEERKRQEEIEALRGEKRENSFGSQIRNYVLYP 324 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 YQMVKDLR+ IE + VL GDLD F+ Sbjct: 325 YQMVKDLRSGIETGNVDAVLGGDLDQFV 352 >gi|67920292|ref|ZP_00513812.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501] gi|67857776|gb|EAM53015.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501] Length = 358 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 151/341 (44%), Positives = 221/341 (64%), Gaps = 3/341 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD + L + P W A+ ++E L + + ++ +L D + Sbjct: 11 IFDLPALKAVIKDLENTSAQPQFWDQPETAQTTLQELNDLKSQLEQYQQWCLQLDDTKAI 70 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 EL EDD ++ QE DN+ ++ ++ + + LLSG D+ A L ++AGAGGT++QD Sbjct: 71 AELLELEDDATLRQEAEDNIIQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQD 130 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRW E++ +K E+ +G+EAGIKSATL I+G A+G+LKGE+G HRLVR Sbjct: 131 WAQMLLRMYTRWGEQQGYKVHLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRLVR 190 Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 ISP+++N +R TSF+ I + P + +D ++++I + D I T R+ G GGQ+VN ++AVR Sbjct: 191 ISPFNANGKRQTSFAGIEIMPALEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVR 250 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGR 310 + H+PTG+ V+C QERSQ +NK +A +L+AKL + E Q+ +EIA I E WG Sbjct: 251 VVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAEEQRAQEIAEI-RGDIVEAAWGT 309 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRTNIE T + V+DG LD+F++A L Sbjct: 310 QIRNYVFHPYQMVKDLRTNIETTDVNGVMDGSLDEFIEAYL 350 >gi|220913146|ref|YP_002488455.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6] gi|254790908|sp|B8HBH8|RF2_ARTCA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|219860024|gb|ACL40366.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6] Length = 371 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 137/326 (42%), Positives = 210/326 (64%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ + +P LW + A+ + H + + + + R+ D +L+EL +E D + Sbjct: 36 LSERAGEPDLWDDPAAAQKITSRLSHRQSELERLTTLASRIDDLEVLVELGQDEGDADSM 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L+ I+ ++ + +LLSGE D +A + + AGAGG ++ D+A ML+RMY RWA Sbjct: 96 GEAAAELESIQKALKNLEVVTLLSGEYDEREAVVSIRAGAGGVDAADFAEMLMRMYLRWA 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ + T ++ EEAG+KSAT +K P A+G L E G HRLVRISP+D+ RR TS Sbjct: 156 ERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVRISPFDNQGRRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P+++ + I+I +++ R+D +R+SG GGQ VNTTDSAVR+THIPTGVVV Q Sbjct: 216 FAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQSVNTTDSAVRLTHIPTGVVVSMQN 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 E+SQ +N+A A +L+++L L+ +++E+ + + WG Q+RSYVL PYQMVKD Sbjct: 276 EKSQLQNRAAAMRVLQSRLLLLK-KEQEDAEKKALAGDVKASWGDQMRSYVLNPYQMVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT E + S V DG++DDF+ A + Sbjct: 335 LRTEHEVGNTSAVFDGEIDDFIDAGI 360 >gi|224532320|ref|ZP_03672952.1| peptide chain release factor 2 [Borrelia valaisiana VS116] gi|224511785|gb|EEF82191.1| peptide chain release factor 2 [Borrelia valaisiana VS116] Length = 269 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 140/264 (53%), Positives = 190/264 (71%), Gaps = 10/264 (3%) Query: 97 LEVEY----KQFESLLS-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 +E+E+ KQ++ LL+ E D+N A+L +H+GAGGTE+ DW ML RMY+R+ E+ Sbjct: 1 MEIEFNILEKQYKDLLTISYFKEELDANGAFLTIHSGAGGTEACDWVAMLYRMYSRYVER 60 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RISP+D+ +RHTSF+ Sbjct: 61 KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++V PV+D+ IEI I D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R Sbjct: 120 SVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK A +L+++LYE K +E + +K EI WG QIRSYV QPY +VKD R Sbjct: 180 SQHKNKEMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T E ++ + V+DG++D+F++ L Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYL 263 >gi|294786673|ref|ZP_06751927.1| peptide chain release factor 2 [Parascardovia denticolens F0305] gi|294485506|gb|EFG33140.1| peptide chain release factor 2 [Parascardovia denticolens F0305] Length = 377 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 144/331 (43%), Positives = 207/331 (62%), Gaps = 3/331 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 +++ L + P LW + A+ + + E RL D L L +EE+D Sbjct: 32 KIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTEAGQRLDDIDTLYSLGMEEED 91 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 QE L+++ ++ + ++LL GE D+ A + + +GAGG ++ DWA ML+RMY Sbjct: 92 EDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTIRSGAGGVDAADWAQMLMRMY 151 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RWAE+ ++K + ++ EEAGIKSAT + P AYG L E G HRLVRISP+D+NSR Sbjct: 152 IRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKLSVEGGTHRLVRISPFDNNSR 211 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R TSF+++ V P+V+ + I++ +SD R+DTY + G GGQ VNTT SAVR+TH+PTG+VV Sbjct: 212 RQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQGVNTTYSAVRLTHLPTGIVV 271 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPY 320 Q ERSQ +N+A A +L+++L L L++ EE A E + + WG Q+RSYVL PY Sbjct: 272 TMQDERSQIQNRAAAMAVLQSRL--LVLKQEEEAAKKKELAGDIKASWGDQMRSYVLHPY 329 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QMVKDLRT E + P V DGD+D F+ A + Sbjct: 330 QMVKDLRTGYETSDPQAVFDGDIDGFIDAGI 360 >gi|78185691|ref|YP_378125.1| peptide chain release factor 2 [Synechococcus sp. CC9902] gi|78169985|gb|ABB27082.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus sp. CC9902] Length = 356 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 148/334 (44%), Positives = 208/334 (62%), Gaps = 9/334 (2%) Query: 26 LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 LN + +D P W + A+ MR + + + + + + D LEL Sbjct: 11 LNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLADWRSAIDDAKATLELYEL 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D +L E L ++ ++ + E LLSGE D A L ++AGAGGT++QDWA MLL Sbjct: 71 EADEEMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 130 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE + EI +GEEAGIKSAT+ ++G AYG+L+ E+G HRLVRISP+++ Sbjct: 131 RMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRLVRISPFNA 190 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+ I V P +++ ++I+I + D + T R+ GAGGQ+VN ++AVRI H+PTG Sbjct: 191 NDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRIQHLPTG 250 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317 + V+C QERSQ +NK +A +L+AKL + ++R EIA+I E WG QIR+YV Sbjct: 251 LAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 309 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PYQMVKDLRT E V+DG LD F+ A+L Sbjct: 310 HPYQMVKDLRTQEETNDVQAVMDGALDPFIDASL 343 >gi|217963389|ref|YP_002349067.1| peptide chain release factor 2, programmed [Listeria monocytogenes HCC23] gi|217332659|gb|ACK38453.1| peptide chain release factor 2, programmed [Listeria monocytogenes HCC23] Length = 304 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 137/264 (51%), Positives = 179/264 (67%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R++ L + DP+ W + A+ ++ E +++ I LEL EE D Sbjct: 4 RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY Sbjct: 64 EDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV Sbjct: 184 RHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243 Query: 262 QCQQERSQHKNKAQAWNMLRAKLY 285 CQ ERSQ KN+ QA ML+ KLY Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLY 267 >gi|269955834|ref|YP_003325623.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM 15894] gi|269304515|gb|ACZ30065.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM 15894] Length = 370 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 144/350 (41%), Positives = 219/350 (62%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + G+ D +++ L+ + P LW + A+ + ++ +K + Sbjct: 13 LRSTLESIEGVSDPVALQAKIAVLSEQASVPDLWDDPEAAQKITSALSATQAELNRVKSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D L+EL E D L E + I+ +++ + +LLSGE D+ DA + + Sbjct: 73 GRRIDDVETLVELGQEMGDEDSLTEAEAEVVGIRKDLDALEVRTLLSGEYDARDAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ F T+ ++ EEAG+KSAT + P A+G L Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGFPTKVMDTSYAEEAGLKSATFEVNAPYAFGNLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI ES+ ++D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDSVEIPESEIKVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++++EE A E + Sbjct: 253 VNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLVRQQEEAAKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+RSYVLQPYQMVKDLRT E + + V DG +D+F++A + Sbjct: 311 GDIKASWGDQMRSYVLQPYQMVKDLRTEHESGNTAAVFDGAIDEFIEAGI 360 >gi|257785087|ref|YP_003180304.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469] gi|257473594|gb|ACV51713.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469] Length = 369 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 146/330 (44%), Positives = 200/330 (60%), Gaps = 1/330 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q++S L ++ P+ W + A+ +M + L + ++ I +++L D EL E Sbjct: 30 QQISELEAESARPNFWDDAEAAQKIMTQLASLRDDVAGIDRAKEKLGDAEAAFELGTELG 89 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + E+ ++ ++ + S + E D DA + + G GG ESQDW ML M Sbjct: 90 DQASFDESRALAVSLEKDLSELELSSWFTDELDHGDAIVTIKPGQGGLESQDWCEMLFHM 149 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y ++ ++R +K + + E G+ AT + G NAYG L+ EQGVHRLVRISP D Sbjct: 150 YLKYCDRRGWKVDINDAPAAEVIGLDRATFTVSGKNAYGMLRAEQGVHRLVRISPTDDKK 209 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RR TSF+ + V PV+ + IE++I +D RID Y ASG GGQ VNTTDSAVRITHIPTG V Sbjct: 210 RRQTSFAGVEVLPVLPEDIEVDIDPNDLRIDVYHASGPGGQGVNTTDSAVRITHIPTGTV 269 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V CQ ERSQ +NKA A N+LR++LYE+E +KRE + K EI +G QIRSYVL PY Sbjct: 270 VTCQNERSQLQNKAAAMNILRSRLYEIEKEKREAELDELRGPKREISFGNQIRSYVLYPY 329 Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKA 349 Q++KDLRT E + V DGDLD F+ A Sbjct: 330 QLIKDLRTGAETGNVESVFSDGDLDQFIIA 359 >gi|111220808|ref|YP_711602.1| peptide chain release factor 2 [Frankia alni ACN14a] gi|111148340|emb|CAJ60012.1| peptide chain release factor RF-2 [Frankia alni ACN14a] Length = 369 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 150/350 (42%), Positives = 215/350 (61%), Gaps = 4/350 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L+ + + D + +R L + DP LW + A+++ R IS ++ Sbjct: 14 QLDATLSGIESVLDVEGLRRRAEELERQAADPDLWSDQDRAQVVTRRLSSTRGDISRVEG 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L +L E + +L + ++ + +LLSGE D DA +++ Sbjct: 74 LRRRLDDIAAAADLGD----DDLLAEAAADLPALNGDISALEVRTLLSGEFDERDAIVQL 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT +K P AYG L Sbjct: 130 SAGAGGVDAADWTAMLLRMYLRWAERHGYPTEVFDTSEAEEAGLKSATFQVKAPYAYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S ++I + D RID +R+SG GGQ Sbjct: 190 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 250 GVNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAAKQRITG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ +G QIR+YVL PYQ+VKDLRT+ E ++ VLDG+LD+F+ A + Sbjct: 310 GPQDVSFGSQIRNYVLHPYQLVKDLRTDTETSNTGGVLDGELDNFIDAEI 359 >gi|313816439|gb|EFS54153.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA1] gi|313827262|gb|EFS64976.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA2] gi|314917824|gb|EFS81655.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA1] gi|314919714|gb|EFS83545.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA3] gi|314930043|gb|EFS93874.1| peptide chain release factor 2 [Propionibacterium acnes HL067PA1] gi|314956378|gb|EFT00690.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA1] gi|314957250|gb|EFT01353.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA1] gi|314967699|gb|EFT11798.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA1] gi|315098170|gb|EFT70146.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA2] gi|315101677|gb|EFT73653.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA1] gi|315109496|gb|EFT81472.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA2] gi|327452380|gb|EGE99034.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA3] gi|327452743|gb|EGE99397.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA2] gi|328753837|gb|EGF67453.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA1] Length = 370 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 209/329 (63%), Gaps = 3/329 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +D S+ + T++ + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDKESLAEATTETV-KLREEIDALEVRTLLSGQYDEREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 341 >gi|288923233|ref|ZP_06417373.1| peptide chain release factor 2 [Frankia sp. EUN1f] gi|288345407|gb|EFC79796.1| peptide chain release factor 2 [Frankia sp. EUN1f] Length = 366 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 202/327 (61%), Gaps = 4/327 (1%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + D + +R L + DP LW + A+ + R + I+ + ++ RL D + Sbjct: 22 VLDIEGLRRRAQELEQEAADPDLWSDQARAQAVTRRLSGVKGDIARVDGLRRRLDDLIAA 81 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+L D +L E + +L + ++ + +LLSGE D DA +++ AGAGG ++ D Sbjct: 82 LDLG----DEDLLAEMAVDLPSLTRDISALEVRTLLSGEYDERDAIVQLSAGAGGVDAAD 137 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W MLLRMY RWAE+ + TE + + EEAG+KSAT ++ P AYG L+ E GVHRLVR Sbjct: 138 WTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVRCPYAYGTLRSEHGVHRLVR 197 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ +RR TSF+ + V P V+ S ++I E + RID +R+SG GGQ VNTTDSAVRI Sbjct: 198 ISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQGVNTTDSAVRI 257 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VV CQ ERSQ +NKA A +L+AKL E + ++ +G QI Sbjct: 258 THLPTGIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGGPQDVSFGSQI 317 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVL 339 R+YVL PYQMVKDLRT +E ++ VL Sbjct: 318 RNYVLHPYQMVKDLRTEVETSNTGAVL 344 >gi|255530197|ref|YP_003090569.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366] gi|255343181|gb|ACU02507.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366] Length = 357 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 140/288 (48%), Positives = 200/288 (69%), Gaps = 7/288 (2%) Query: 66 LCDNLILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L+L + L+ D + +QE D + ++E K ++L + D A +++ A Sbjct: 72 LEDTLVLFDF-LQSGDATEEEMQEQYDACLKAIEDLELK---NMLKSKEDQLPAVMQITA 127 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA ML+RMY W EK +K + +GE AG+KS TL G AYG+LKG Sbjct: 128 GAGGTESCDWAYMLMRMYMMWGEKNGYKITEQDYQEGEIAGVKSVTLQFSGDFAYGYLKG 187 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+DSN+RRHTSF+S++VYP+VDD+IEIE+ +S+ +T+R+ GAGGQ+V Sbjct: 188 ENGVHRLVRISPFDSNARRHTSFASVYVYPLVDDTIEIEVKDSEIEFETFRSGGAGGQNV 247 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N ++AVR+ H P+G++++ Q+ RSQ +NK A +L+++LYE E++KR E + E +K Sbjct: 248 NKVETAVRLYHKPSGIIIKNQESRSQLQNKENAIRLLKSQLYEAEMRKRMEATALIEGNK 307 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYVL + VKD RTN + ++P VLDG+L+DF+KA L Sbjct: 308 KKIEWGSQIRSYVLDD-RRVKDHRTNFQSSNPQAVLDGELNDFLKAYL 354 >gi|300868546|ref|ZP_07113164.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506] gi|300333459|emb|CBN58356.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506] Length = 291 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 143/281 (50%), Positives = 201/281 (71%), Gaps = 5/281 (1%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLEL E D S+LQE NL ++ E++ + + LLSG D+ A L ++AGAGGT++Q Sbjct: 3 LLEL---ETDESLLQEAYTNLSQLSRELDQWELQQLLSGPYDAGGAVLTINAGAGGTDAQ 59 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMYTRW E++ +K EI +G+EAG+KSATL I G AYG+L+ E+G HRLV Sbjct: 60 DWAEMLLRMYTRWGERQGYKVHLAEISEGDEAGLKSATLEIVGRYAYGYLRSEKGTHRLV 119 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+++N +R TSF+ + V P++D S+E++I E D + T RA G GGQ+VN ++AVR Sbjct: 120 RISPFNANDKRQTSFAGVEVMPILDRSVELDIPEKDLEVTTSRAGGKGGQNVNKVETAVR 179 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310 I H+PTG+ V+C +ERSQ +NK +A +L+AKL + ++R +EIA I E WG Sbjct: 180 IVHLPTGLAVRCTEERSQLQNKEKALVLLKAKLLVVAREQRAKEIAEI-RGDMVEAAWGN 238 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRT +E T+ +DV++G+L+ F++A L Sbjct: 239 QIRNYVFHPYQMVKDLRTGVETTAIADVMNGELEPFIQAYL 279 >gi|302820696|ref|XP_002992014.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii] gi|300140136|gb|EFJ06863.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii] Length = 382 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 145/338 (42%), Positives = 217/338 (64%), Gaps = 7/338 (2%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--ALEED 80 L+ L + DP W+ +A+ ++ E + + ++ K + ++ D ++EL +E Sbjct: 39 LADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTFRAKVDDAQCIVELLEEMESP 98 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D ++ E ++ + I ++ + LLSG D A + + AGAGGT++QDWA MLLRM Sbjct: 99 DAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARITITAGAGGTDAQDWAEMLLRM 158 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWA + FK+ +E GEEAGIKSATL I G AYG++ GE+G HRLVR SP++S Sbjct: 159 YQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGYISGEKGTHRLVRQSPFNSKG 218 Query: 201 RRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R TSF+ + V P++++S IE+EI E D I T R+ G GGQ+VN ++AVR+THIPTG+ Sbjct: 219 LRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKGGQNVNKVETAVRVTHIPTGI 278 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANI-GESSKTEIGWGRQIRSYVL 317 ++C +ERSQ +NK +A +L++KL LE Q+ EI I G+ K E WG+QIR+YV Sbjct: 279 ALRCSEERSQLQNKIKAIALLKSKLLVILEDQRAAEIKEIRGDVVKAE--WGQQIRNYVF 336 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 PY++VKDLRTN+E + S ++DG+L+ + A L K+ Sbjct: 337 HPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSKQ 374 >gi|328752610|gb|EGF66226.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA2] Length = 370 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 209/329 (63%), Gaps = 3/329 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWGDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +D S+ + T++ + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDKESLAEATTETV-KLREEIDALEVRTLLSGQYDEREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 341 >gi|172039100|ref|YP_001805601.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142] gi|171700554|gb|ACB53535.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142] Length = 358 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 150/340 (44%), Positives = 219/340 (64%), Gaps = 3/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD + L P W + A+ ++E L + + + +L D + Sbjct: 12 FDLPALKAAIKNLENTAAQPQFWDDPETAQTTLQELNDLKSQLEQYQRWCHQLEDTKAIA 71 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EDD ++ QE +N+ ++ ++ + + LLSG D+ A L ++AGAGGT++QDW Sbjct: 72 ELLELEDDTTLRQEAQENITQLNHNLDRWELQQLLSGIYDTKGAILTINAGAGGTDAQDW 131 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMYTRW E++ +K + E+ +G+EAGIKSATL I+G A+G+LKGE+G HRLVRI Sbjct: 132 AQMLLRMYTRWGEQQGYKVDLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRLVRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+++N +R TSF+ + V P + +D +++EI + D I T R+ G GGQ+VN ++AVR+ Sbjct: 192 SPFNANGKRQTSFAGVEVMPALEEDDLKVEIPDKDLEISTSRSGGKGGQNVNKVETAVRV 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R +EIA I + WG Q Sbjct: 252 VHIPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEI-RGDMVDAAWGNQ 310 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PYQMVKDLRTNIE T + V+DG LD F++A L Sbjct: 311 IRNYVFHPYQMVKDLRTNIETTDITGVMDGYLDPFIEAYL 350 >gi|315226283|ref|ZP_07868071.1| peptide chain release factor RF2 [Parascardovia denticolens DSM 10105] gi|315120415|gb|EFT83547.1| peptide chain release factor RF2 [Parascardovia denticolens DSM 10105] Length = 396 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 144/331 (43%), Positives = 207/331 (62%), Gaps = 3/331 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 +++ L + P LW + A+ + + E RL D L L +EE+D Sbjct: 51 KIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTEAGQRLDDIDTLYSLGMEEED 110 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 QE L+++ ++ + ++LL GE D+ A + + +GAGG ++ DWA ML+RMY Sbjct: 111 EDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTIRSGAGGVDAADWAQMLMRMY 170 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RWAE+ ++K + ++ EEAGIKSAT + P AYG L E G HRLVRISP+D+NSR Sbjct: 171 IRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKLSVEGGTHRLVRISPFDNNSR 230 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R TSF+++ V P+V+ + I++ +SD R+DTY + G GGQ VNTT SAVR+TH+PTG+VV Sbjct: 231 RQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQGVNTTYSAVRLTHLPTGIVV 290 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPY 320 Q ERSQ +N+A A +L+++L L L++ EE A E + + WG Q+RSYVL PY Sbjct: 291 TMQDERSQIQNRAAAMAVLQSRL--LVLKQEEEAAKKKELAGDIKASWGDQMRSYVLHPY 348 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QMVKDLRT E + P V DGD+D F+ A + Sbjct: 349 QMVKDLRTGYETSDPQAVFDGDIDGFIDAGI 379 >gi|302762182|ref|XP_002964513.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii] gi|300168242|gb|EFJ34846.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii] Length = 366 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 145/337 (43%), Positives = 216/337 (64%), Gaps = 7/337 (2%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--ALEED 80 L+ L + DP W+ +A+ ++ E + + ++ K + ++ D ++EL +E Sbjct: 32 LADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTFRAKVDDAQCIVELLEEMESP 91 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D ++ E ++ + I ++ + LLSG D A + + AGAGGT++QDWA MLLRM Sbjct: 92 DAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARITITAGAGGTDAQDWAEMLLRM 151 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWA + FK+ +E GEEAGIKSATL I G AYG++ GE+G HRLVR SP++S Sbjct: 152 YQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGYISGEKGTHRLVRQSPFNSKG 211 Query: 201 RRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R TSF+ + V P++++S IE+EI E D I T R+ G GGQ+VN ++AVR+THIPTG+ Sbjct: 212 LRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKGGQNVNKVETAVRVTHIPTGI 271 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANI-GESSKTEIGWGRQIRSYVL 317 ++C +ERSQ +NK +A +L++KL LE Q+ EI I G+ K E WG+QIR+YV Sbjct: 272 ALRCSEERSQLQNKIKAIALLKSKLLVILEEQRAAEIKEIRGDVVKAE--WGQQIRNYVF 329 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY++VKDLRTN+E + S ++DG+L+ + A L K Sbjct: 330 HPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSK 366 >gi|255547508|ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis] gi|223545862|gb|EEF47365.1| peptide chain release factor, putative [Ricinus communis] Length = 458 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 144/339 (42%), Positives = 218/339 (64%), Gaps = 7/339 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q ++ L +K + W + A+ + + + I + E + ++ D +++L E D Sbjct: 114 QEVTNLESKAANTSFWDDRATAQETLLALTDVKDKIKLLTEFKTKVEDAETIVKLTEEMD 173 Query: 81 --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D +L+E S ++ + +E + LLSG D A + + AGAGGT++QDWA+MLL Sbjct: 174 SIDTGLLEEASSIIKELNKSLERFELTQLLSGPYDKESAVISITAGAGGTDAQDWADMLL 233 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW EK+++KT +E GEEAGIKSA + ++G AYG+L GE+G HR+VR SP+++ Sbjct: 234 RMYVRWGEKQRYKTRVVEKSPGEEAGIKSAMIEVEGRYAYGYLSGEKGTHRIVRQSPFNA 293 Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 R TSFS I V P++ ++S+++E+ E D I RA G GGQ+VN ++AVRITHIPT Sbjct: 294 KGLRQTSFSGIEVMPLLPEESMDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 353 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRSY 315 GV V+C +ERSQ NK +A + L+AKL + +++R EI I G++ K E WG+QIR+Y Sbjct: 354 GVTVRCTEERSQLANKIKALSRLKAKLLVIAVEQRASEIKQIRGDAVKAE--WGQQIRNY 411 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 V PY++VKD+RT E + + V+DG+L+ F+KA L K Sbjct: 412 VFHPYKLVKDVRTGYETSDVTSVMDGELEAFIKAYLKYK 450 >gi|313764090|gb|EFS35454.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA1] gi|314914951|gb|EFS78782.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA4] Length = 370 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 144/329 (43%), Positives = 209/329 (63%), Gaps = 3/329 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQGAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +D S+ + T++ + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDKESLAEATTETV-KLREEIDALEVRTLLSGQYDEREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 341 >gi|119715500|ref|YP_922465.1| peptide chain release factor 2 [Nocardioides sp. JS614] gi|119536161|gb|ABL80778.1| bacterial peptide chain release factor 2 (bRF-2) [Nocardioides sp. JS614] Length = 375 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 148/350 (42%), Positives = 207/350 (59%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + D + ++ L + P LW + A + L + Sbjct: 15 QLQATMHTIEQVLDLETMRAEIADLGEQVAAPDLWDDQDNATRVTGRLSALQGELDRFTA 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D I++E+A EE D L E L R+K VE + +LLSGE D+ +A + + Sbjct: 75 LQGSVDDLAIMVEMAQEEGDADALAEAEAELGRLKRSVEALEVRTLLSGEYDAREAIVTI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A ML+RMYTRWAE+ K+ E ++ EEAGIKSA I P AYG L Sbjct: 135 RSGAGGVDAADFAEMLMRMYTRWAEQHKYPVEVFDVSYAEEAGIKSAEFAIHAPYAYGTL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V PV++ + EIEI E+D R D +R+ G GGQ Sbjct: 195 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIRTDVFRSGGPGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A ++ + + E Sbjct: 255 SVNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKASAM-VVLKAKLLAKKKAEEAALKKDLK 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+R+YVL PYQMVKDLRT E +P V DGD+DDF++A + Sbjct: 314 GDVAAAWGDQMRNYVLNPYQMVKDLRTGYEVGNPQSVFDGDVDDFIEAGI 363 >gi|225011020|ref|ZP_03701485.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C] gi|225004825|gb|EEG42782.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C] Length = 288 Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 137/278 (49%), Positives = 193/278 (69%), Gaps = 8/278 (2%) Query: 77 LEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 + ED+ I Q T D L+ + +F ++LS E D+ A L++ AGAGGTES DWA Sbjct: 10 ITEDELKIAYQNTLDVLEDL-------EFRNMLSEEGDNLSAVLQITAGAGGTESCDWAA 62 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 ML+RMY W++K FK + L +G+ AG+K+ TL I+G A+GWLKGE GVHRLVRISP Sbjct: 63 MLMRMYMMWSQKAGFKIKELNYQEGDVAGVKTVTLGIEGDFAFGWLKGENGVHRLVRISP 122 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +DSN++RHTSF+S++VYP++DDSIEI I+ +D R+ GAGGQ+VN ++ V +TH Sbjct: 123 FDSNAKRHTSFASVYVYPLIDDSIEIVINPADISWAFARSGGAGGQNVNKVETKVILTHH 182 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 PTG+++ + RSQ N+ A +L+++LYE+EL+KR+E + ESSK +I WG QIR+Y Sbjct: 183 PTGIIIHNSETRSQLDNRENAMKLLKSQLYEIELRKRQEARSEIESSKMKIEWGSQIRNY 242 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 VL PY++VKD+R+ E VLDG LD F+K L + Sbjct: 243 VLHPYKLVKDVRSGTETGDVDAVLDGHLDPFLKGFLML 280 >gi|222624780|gb|EEE58912.1| hypothetical protein OsJ_10554 [Oryza sativa Japonica Group] Length = 356 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 146/333 (43%), Positives = 199/333 (59%), Gaps = 35/333 (10%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 W ++R L+ E P LW + + A + RE L I + + + L +++ +L L Sbjct: 46 WGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDMLRL 105 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A EEDD + ET V AGAGGTES DWA Sbjct: 106 AREEDDNEL--ET--------------------------------VQAGAGGTESMDWAA 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 M++ MY+ WA++R + +E GE AGIK AT+ + G A+G+ K E GVHRLVRISP Sbjct: 132 MVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +DS RRHTSF+++ V P++ D S +I +SD RI+ +R+ G GGQH N T+SAVRI H Sbjct: 192 FDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRIVH 251 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ ++ S +EI WG QIRS Sbjct: 252 IPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGNQIRS 311 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 YVL PY+MVKDLRTN E + P VL+GDLDDF+ Sbjct: 312 YVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 344 >gi|327329965|gb|EGE71719.1| peptide chain release factor 2 [Propionibacterium acnes HL097PA1] Length = 370 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 209/329 (63%), Gaps = 3/329 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +D S+ + T++ + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDKESLAEATTETV-KLREEIDALEVRTLLSGQYDEREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIK+AT ++ P AYG L Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKAATFVVHAPFAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 313 SEGNSWGAQMRSYVLHPYQMVKDLRTNHE 341 >gi|159027417|emb|CAO86901.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 330 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 214/321 (66%), Gaps = 3/321 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W N A+ ++E +++ + ++L D ++EL E D ++L+E +DN+ Sbjct: 5 PTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLELESDRALLEEATDNI 64 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++ +++ + + LL+G D A L ++AGAGGT++QDW MLLRMY+RWAEK+ +K Sbjct: 65 THLQHDLDRWELQQLLNGPYDPKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKV 124 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 EI +G+EAGIKS T+ I G AYG+LKGE+G HRLVRISP+++N +R TSF+ + V Sbjct: 125 TLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 184 Query: 213 PVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P++ DD + +EI + D I T R+ G GGQ+VN ++AVR+ H+PTG+ V+C QERSQ + Sbjct: 185 PILGDDVVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQ 244 Query: 272 NKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK +A +L+AKL + Q+ + IA I E WG QIR+YV PYQ+VKDLR+N+ Sbjct: 245 NKEKALALLKAKLLIIAREQQAQAIAEI-RGDMVEAAWGNQIRNYVFHPYQLVKDLRSNV 303 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E T + V++GDLD F++A L Sbjct: 304 ETTDVTGVMNGDLDSFIEAYL 324 >gi|126657098|ref|ZP_01728269.1| peptide chain release factor 2 [Cyanothece sp. CCY0110] gi|126621641|gb|EAZ92351.1| peptide chain release factor 2 [Cyanothece sp. CCY0110] Length = 358 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 147/341 (43%), Positives = 222/341 (65%), Gaps = 3/341 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD + L P W A+ +++ L + + ++ ++L D + Sbjct: 11 IFDLPALKANIKNLENTAAQPQFWDEPETAQKTLQKLNDLKSQLEQYQQWCEQLEDTEAI 70 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 EL EDD ++ +E +N+ ++ ++ + + LLSG D+ A L ++AGAGGT++QD Sbjct: 71 AELLELEDDTTLRREAQENITQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQD 130 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRW E++ +K E+ +G+EAGIKSATL I+G A+G+LKGE+G HRLVR Sbjct: 131 WAQMLLRMYTRWGEQQGYKVNLTELSEGDEAGIKSATLEIEGCYAFGYLKGEKGTHRLVR 190 Query: 193 ISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 ISP+++N +R TSF+ + V P++ +D ++++I + D I T R+ G GGQ+VN ++AVR Sbjct: 191 ISPFNANGKRQTSFAGVEVMPMLEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVR 250 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310 I H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R +EIA I E WG Sbjct: 251 IVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEI-RGDMVEAAWGN 309 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRTN+E T + V+DG+LD F++A L Sbjct: 310 QIRNYVFHPYQMVKDLRTNVETTDVTGVMDGNLDSFIEAYL 350 >gi|327403921|ref|YP_004344759.1| peptide chain release factor 2 (bRF-2) [Fluviicola taffensis DSM 16823] gi|327319429|gb|AEA43921.1| bacterial peptide chain release factor 2 (bRF-2) [Fluviicola taffensis DSM 16823] Length = 360 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 215/329 (65%), Gaps = 11/329 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDDCSI 84 KT+DP+ W + +A+ M++ + L I ++ + D +L+E A EE +C Sbjct: 36 KTQDPNFWDDPKKAEAEMKDIRGLKFWIESYTRLKSQSDDLEVLIEFVKEGAAEESECD- 94 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 + Q + +E + +++LSGE D+ A +++ AGAGGTE+ DWA ML+RMY W Sbjct: 95 -----EAYQSMLTTIEEVELKNMLSGEEDALSAVIQITAGAGGTEACDWAGMLMRMYIMW 149 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AEK +K + L +G+ AGIK+ TL I+G A+G+LKGE G+HRLVR+SPY+S +R T Sbjct: 150 AEKSGYKVKELNFQEGDVAGIKTVTLEIEGEFAFGYLKGENGIHRLVRVSPYNSQGKRMT 209 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S++VYP VDD+IEI ++ +D +T+R+ GAGGQ+VN ++AVR+ H +G++++ Sbjct: 210 SFASVYVYPSVDDTIEIYVNPADITFETFRSGGAGGQNVNKVETAVRLRHAASGIIIENS 269 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 + RSQ NK +A +LR++LYE+EL+KR E + E+ K +I WG QIRSYVL + VK Sbjct: 270 ESRSQLANKEKAMQLLRSQLYEIELRKRAESRDQIEAGKKKIEWGSQIRSYVLDD-RRVK 328 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 D RT+ P VLDGDL F+K+ L + Sbjct: 329 DHRTDYSVNDPDKVLDGDLLPFLKSFLMM 357 >gi|328955235|ref|YP_004372568.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium glomerans PW2] gi|328455559|gb|AEB06753.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium glomerans PW2] Length = 383 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 146/336 (43%), Positives = 203/336 (60%), Gaps = 5/336 (1%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D +R+ L ++ P W + A+ +M E + +S ++ + RL D + L+LA Sbjct: 30 DEKRERIVELEQRSARPDFWDDGERARAVMEELSCARDDVSGVERARTRLADAVAALQLA 89 Query: 77 --LEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQD 132 LE D + +L E Q E S +GE D A + + G GG E+QD Sbjct: 90 SELEHGDEADELAAEATAAASELTREIDQMELSSWFTGEFDHGSAIITIKPGQGGLEAQD 149 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W ML +MY ++ E+R +K + + GI AT ++G +A+G L+ E GVHRLVR Sbjct: 150 WTFMLFKMYMKYCERRGWKVTVNDCPPADVIGIDRATFTVEGKDAFGMLRAEAGVHRLVR 209 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP D RR T+F+ + V PV+ D I++EI +D R+D Y ASG GGQ VNTTDSAVR+ Sbjct: 210 ISPTDDKKRRQTTFAGVEVIPVLPDDIDVEIDPTDIRVDVYHASGPGGQGVNTTDSAVRV 269 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VV CQ ERSQ +NKA +L+++L+ELEL+KREE + K IG+G QI Sbjct: 270 THLPTGIVVTCQNERSQIQNKAACMQILKSRLFELELEKREEALDEIRGPKHTIGFGNQI 329 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347 RSYVL PYQMVKDLR+ +E + + VL DGDLD F+ Sbjct: 330 RSYVLYPYQMVKDLRSGVETGNVASVLEDGDLDPFI 365 >gi|311743767|ref|ZP_07717573.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272] gi|311312897|gb|EFQ82808.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272] Length = 371 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 152/350 (43%), Positives = 217/350 (62%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L + + D D + ++ L + P LW + A+ + L + + + Sbjct: 13 LDQTLTSVEKVLDLDAMRKEIAELQEQVGAPDLWDDQANAQRVTGRLSVLQAEVDKVTGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L E+ALEE D + + + + L R+ +E + +LLSGE D DA + + Sbjct: 73 RQRLDDLELLHEMALEEGDDASVADAAAELVRVHKSIEALEVRTLLSGEYDMRDALVSIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A ML RMY RWAE+ + E ++ EEAG+KS T +K P AYG L Sbjct: 133 SGAGGVDAADFALMLQRMYIRWAERHGYTVEIYDVSYAEEAGLKSTTFAVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF++I V PV++ + EI++ + + R+D YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAAIEVVPVLEQTDEIDVPDEEIRVDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301 VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A M+ K L L+K EE A++ E Sbjct: 253 VNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKASA--MVILKAKLLALKKAEERAHLDELR 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG Q+R+YVL PYQMVKDLRT E + VLDG++DDF++A + Sbjct: 311 GDVQASWGDQMRNYVLNPYQMVKDLRTEHESGNTQGVLDGEIDDFIEAGI 360 >gi|284929451|ref|YP_003421973.1| peptide chain release factor 2 [cyanobacterium UCYN-A] gi|284809895|gb|ADB95592.1| bacterial peptide chain release factor 2 (bRF-2) [cyanobacterium UCYN-A] Length = 344 Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 147/328 (44%), Positives = 219/328 (66%), Gaps = 3/328 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T P+ W N A+ + +E + + + + ++L D I+++L + ++D S+L Sbjct: 11 LENTTIQPNFWDNPETAQKISQELSNFKSQLDQYHQWYNKLEDTKIIMDLLILDNDKSLL 70 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E +N+ ++K ++ + LLSG D A L ++ G GGT++QDW+ MLLRMY RW Sbjct: 71 EEAQNNITQLKKNLDNWDLQQLLSGTYDIKGAILNINTGVGGTDAQDWSEMLLRMYRRWG 130 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + +K +EI +G+EAGIKSATL +G A+G+LKGE+G HRLVRISP+++N +R TS Sbjct: 131 ESQGYKVNLVEISEGDEAGIKSATLEFEGCYAFGYLKGEKGTHRLVRISPFNANGKRQTS 190 Query: 206 FSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 F+ I V P ++ + I++EI + D I T R+ G GGQ+VN ++AVRI H+PTG+ V+C Sbjct: 191 FTGIEVMPKLEGNDIKVEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVHLPTGISVRCT 250 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 QERSQ +NK +A +L+AKL + ++R ++IA I E WG QIRSYV PYQMV Sbjct: 251 QERSQLQNKEKALILLKAKLLIIAQEQRAKKIAEI-RGDIVEAAWGNQIRSYVFHPYQMV 309 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KDLRTN+E T+ +DV+DGDL F++A L Sbjct: 310 KDLRTNVETTNINDVMDGDLGLFIEAYL 337 >gi|87300848|ref|ZP_01083690.1| peptide chain release factor 2 [Synechococcus sp. WH 5701] gi|87284719|gb|EAQ76671.1| peptide chain release factor 2 [Synechococcus sp. WH 5701] Length = 355 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 138/280 (49%), Positives = 190/280 (67%), Gaps = 2/280 (0%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LEL E D +L E + LQ +K ++ + E LLSG D A + ++AGAGGT++QD Sbjct: 65 LELYDLEPDEELLSEANGGLQSLKAALDRWELERLLSGPYDKEGAVISINAGAGGTDAQD 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML+RMYTRWAE K E+ +GEEAGIKS T+ I G AYG+L+ E+G HRLVR Sbjct: 125 WALMLMRMYTRWAEDHGMKVSVDELSEGEEAGIKSCTIEIDGRYAYGYLRNEKGTHRLVR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V P +++ ++++I + D + T R+ GAGGQ+VN ++AVRI Sbjct: 185 ISPFNANDKRQTSFAGVEVMPKLEEDVKLDIPDKDLEVTTSRSGGAGGQNVNKVETAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 H+PTG+ V+C QERSQ +NK +A +L AKL + ++R EIA+I E WG Q Sbjct: 245 LHVPTGLAVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRASEIADI-RGDIVEAAWGNQ 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PYQMVKDLRT +E T V+DGDLD F++A L Sbjct: 304 IRNYVFHPYQMVKDLRTAVETTDVQGVMDGDLDPFIQALL 343 >gi|148657451|ref|YP_001277656.1| peptide chain release factor 2 [Roseiflexus sp. RS-1] gi|148569561|gb|ABQ91706.1| bacterial peptide chain release factor 2 (bRF-2) [Roseiflexus sp. RS-1] Length = 317 Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 148/311 (47%), Positives = 202/311 (64%), Gaps = 7/311 (2%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ L + I+ I +L L+ELA EDD S+ + + L+R +E + E Sbjct: 1 MQRLTRLKEEVERIEAIDRQLTALADLIELAAAEDDDSLQADIAAELKRTGEAIEALEIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL+G D DA+L + AG GGT++QDWA MLLRMY RW E+R F+ ++ +GEEAGI Sbjct: 61 VLLNGPYDDRDAFLSIKAGTGGTDAQDWAEMLLRMYMRWGERRGFQVALIDKSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ ++GP AYG K E GVHRL+R+SP+++ + R TSF+ + V P VDD+ E+ I Sbjct: 121 KSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRP 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRA 282 D RID +R+SG GGQ VNTTDSAVRIT+ P +VV CQ ERSQ +N+ A +LR Sbjct: 181 EDIRIDVFRSSGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRG 240 Query: 283 KLYELELQ-KREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 +L E ELQ KREE A + GE + + +G Q+R+Y L PY +VKD RT+ E + VLD Sbjct: 241 RLLERELQRKREERARLRGEYRQAD--FGNQMRTYYLHPYTLVKDHRTDHETSDVHAVLD 298 Query: 341 GDLDDFMKATL 351 GD+D F++A L Sbjct: 299 GDIDPFIEAYL 309 >gi|153814569|ref|ZP_01967237.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756] gi|317501267|ref|ZP_07959471.1| peptide chain release factor 2 [Lachnospiraceae bacterium 8_1_57FAA] gi|145848063|gb|EDK24981.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756] gi|316897334|gb|EFV19401.1| peptide chain release factor 2 [Lachnospiraceae bacterium 8_1_57FAA] Length = 316 Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 216/307 (70%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L +++ I+++ D ++L+E++ EED +E + LQ+ + E + Sbjct: 1 MKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIEEELQQFEETFEELRIG 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LL+G D ++A + +HAGAGGTES DW ML RMYTRWAEK+ + E L+ +G+ AG+ Sbjct: 61 TLLTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKGYSIEELDYLEGDVAGV 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K T +KG NAYG+L+ E+GVHRLVRISP++S +R TSF+S V P +++ I+IEI++ Sbjct: 121 KGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEEDIDIEIND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQH NK +A ML++KLY Sbjct: 181 DDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++ Q++ E + +I +G QIRSYV+QPY MVKD RTN E ++ V+DG++D Sbjct: 241 LMKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTMVKDHRTNAEVSNVGGVMDGNIDP 300 Query: 346 FMKATLA 352 F+ A L+ Sbjct: 301 FINAYLS 307 >gi|217967791|ref|YP_002353297.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724] gi|217336890|gb|ACK42683.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724] Length = 330 Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 141/249 (56%), Positives = 181/249 (72%), Gaps = 1/249 (0%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + E +L D +A L +HAG GGT++QDW +LLRMY RWAE++ ++ + L+I GEE Sbjct: 73 EIEMVLQDPHDEANAVLSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKILDISPGEE 132 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIKSATLLI+G AYG+LKGE+GVHRLVRISP+D+N RRHTSF+ + V P + +S IE Sbjct: 133 AGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPELPEST-IE 191 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I D +I+T+RA GAGGQHVN +SAVRITHIPTG+VVQCQ ERSQH NK A +L+A Sbjct: 192 IKPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEMALRVLKA 251 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +L ELE +KR E + EI WG QIRSYV PY +VKD RT +E + V+DG+ Sbjct: 252 RLEELEERKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNVQAVIDGE 311 Query: 343 LDDFMKATL 351 +D F++A L Sbjct: 312 IDPFIEAYL 320 >gi|46406291|emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus] Length = 453 Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 148/349 (42%), Positives = 221/349 (63%), Gaps = 10/349 (2%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GL D Q L+ L +K D W + +A+ ++ + + I + + + ++ + Sbjct: 101 AGLLQLD---QELADLESKAADNSFWDDRSKAQKVLMAMTDVKDKIKMLTDFKTQVEEAE 157 Query: 71 ILLELALEED--DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +++L E D D +L+E + ++ + ++ + LLSG D A + + AGAGGT Sbjct: 158 TIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELSELLSGPYDKEGAVISISAGAGGT 217 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ++QDWA+MLLRMY RW EK+++KT +E GEEAGIKSAT+ I+G AYG++ GE+G H Sbjct: 218 DAQDWADMLLRMYVRWGEKQRYKTRVVEKSAGEEAGIKSATIEIEGRYAYGYISGEKGTH 277 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 R+VR SP++S R TSFS + V P++ D+S+ +E+ E D I RA G GGQ+VN + Sbjct: 278 RIVRQSPFNSKGLRQTSFSGVEVMPLLPDESMNVELPEEDLEISFSRAGGKGGQNVNKVE 337 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTE 305 +AVRITHIPTGV V+C +ERSQ NK +A + L+AKL + E Q+ EI I G++ K E Sbjct: 338 TAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE 397 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG+QIR+YV PY++VKD+RT E + V+DG+L+ F+KA L K Sbjct: 398 --WGQQIRNYVFHPYKLVKDVRTGYETSDIVSVMDGELEPFIKAYLKYK 444 >gi|317061399|ref|ZP_07925884.1| peptide chain release factor 2 [Fusobacterium sp. D12] gi|313687075|gb|EFS23910.1| peptide chain release factor 2 [Fusobacterium sp. D12] Length = 331 Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 152/273 (55%), Positives = 198/273 (72%), Gaps = 9/273 (3%) Query: 88 TSDNLQRIKLEVEYKQF----ES-----LLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D +++LE ++KQ ES LL GE D N+A + +H+GAGGTE+ DWA+ML Sbjct: 53 AGDESSQVELEEKHKQLLKDMESFSTGLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLY 112 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRW +K+K E ++ G+ GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+ Sbjct: 113 RMYTRWCHDKKYKIEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDA 172 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +RHTSF+S+ V P VD+S+E+E+ +D RIDTYRASGAGGQH+N TDSAVRITH PTG Sbjct: 173 NKKRHTSFASVEVVPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTG 232 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ+ERSQ N+ A ML++KL ELEL+K+EE + ++EIGWG QIRSYV Q Sbjct: 233 IVVTCQKERSQLNNRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWGSQIRSYVFQ 292 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY MVKD RT +E + V+DGDLD+FM L Sbjct: 293 PYTMVKDHRTGVEVGNIKAVMDGDLDEFMNGYL 325 >gi|257463869|ref|ZP_05628255.1| peptide chain release factor 2 [Fusobacterium sp. D12] Length = 326 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 152/273 (55%), Positives = 198/273 (72%), Gaps = 9/273 (3%) Query: 88 TSDNLQRIKLEVEYKQF----ES-----LLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D +++LE ++KQ ES LL GE D N+A + +H+GAGGTE+ DWA+ML Sbjct: 48 AGDESSQVELEEKHKQLLKDMESFSTGLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLY 107 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRW +K+K E ++ G+ GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+ Sbjct: 108 RMYTRWCHDKKYKIEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDA 167 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +RHTSF+S+ V P VD+S+E+E+ +D RIDTYRASGAGGQH+N TDSAVRITH PTG Sbjct: 168 NKKRHTSFASVEVVPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTG 227 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ+ERSQ N+ A ML++KL ELEL+K+EE + ++EIGWG QIRSYV Q Sbjct: 228 IVVTCQKERSQLNNRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWGSQIRSYVFQ 287 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY MVKD RT +E + V+DGDLD+FM L Sbjct: 288 PYTMVKDHRTGVEVGNIKAVMDGDLDEFMNGYL 320 >gi|320531255|ref|ZP_08032234.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str. F0337] gi|320136522|gb|EFW28491.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str. F0337] Length = 373 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 149/358 (41%), Positives = 221/358 (61%), Gaps = 6/358 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D ++ELA EE+ + ++ L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGEDAAEILAEAEADLSAISKDLSELEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ ++ + L EEAG+KS T I P AY Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEIHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L L+++EE A Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRL--LLLKQQEEDAKK 308 Query: 299 GE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 E + + WG Q+RSYVL PYQMVKDLRTN E +P V DGD+D F+ A + +K Sbjct: 309 KELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|206901574|ref|YP_002251123.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12] gi|206740677|gb|ACI19735.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12] Length = 330 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 141/249 (56%), Positives = 181/249 (72%), Gaps = 1/249 (0%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + E +L D +A L +HAG GGT++QDW +LLRMY RWAE++ ++ + L+I GEE Sbjct: 73 EIEMILQDPHDEANAILSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKILDISPGEE 132 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIKSATLLI+G AYG+LKGE+GVHRLVRISP+D+N RRHTSF+ + V P + +S IE Sbjct: 133 AGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPELPEST-IE 191 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I D +I+T+RA GAGGQHVN +SAVRITHIPTG+VVQCQ ERSQH NK A +L+A Sbjct: 192 IRPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEMALRVLKA 251 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +L ELE +KR E + EI WG QIRSYV PY +VKD RT +E + V+DG+ Sbjct: 252 RLEELEEKKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNVQAVIDGE 311 Query: 343 LDDFMKATL 351 +D F++A L Sbjct: 312 IDPFIEAYL 320 >gi|328949576|ref|YP_004366911.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM 14884] gi|328449900|gb|AEB10801.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM 14884] Length = 367 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 154/350 (44%), Positives = 220/350 (62%), Gaps = 7/350 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ L G D +RL+ L + DP+LW + A+ + +E + + + + Sbjct: 6 LEARLDALRGYLDIPAKERRLAELEAELNDPNLWNDAERARRISQEAARIRRTVETYRTL 65 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L + L+ L L+ ++ L ++ Q+ KLE Y E+LL+ +A L + Sbjct: 66 EADL-EGLVELWNELDPEEREALAGEAEEAQK-KLEALY--HETLLTFPHAEKNAILTIQ 121 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+ DWA MLLRMY R A++ F E +++ G EAGI A ++++G NAYG L Sbjct: 122 PGAGGTEACDWAEMLLRMYRRLADRLGFSVEVVDVTPGAEAGIDYAQIIVRGENAYGLLS 181 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+D++ RRHTSF+ + V P VDD++E+EI D RID +R+ G GGQ Sbjct: 182 VENGVHRLVRPSPFDASGRRHTSFAGVEVMPEVDDTVEVEIKPEDLRIDVFRSQGHGGQG 241 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301 VNTTDSAVRI H+PTG++V CQ RSQHKNK A +L+++L++LE +K+ EE+A + Sbjct: 242 VNTTDSAVRIVHLPTGIIVTCQNTRSQHKNKEIALKVLKSRLFQLEWKKKQEELAKLRGE 301 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K I WG QIRSYVL Q VKD RT + + P +VLDGD++DF+ A L Sbjct: 302 VKP-IEWGSQIRSYVLDK-QYVKDHRTGLMRHDPQNVLDGDIEDFIWAGL 349 >gi|87309088|ref|ZP_01091225.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM 3645] gi|87288079|gb|EAQ79976.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM 3645] Length = 332 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 150/319 (47%), Positives = 213/319 (66%), Gaps = 2/319 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W N A+ ++ + + L + + ++ + D +LE+A EEDD S E + Sbjct: 4 PDFWDNQEIAQTVVGQLKSLKSILEPLEACAAAVGDLDAMLEMA-EEDD-SFDAEAKAEV 61 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 R++ E++ + ++LL+G+ D+ A + +HA GGT++ DWA MLLRMY+ WA + + Sbjct: 62 ARLEAELDQLELKALLNGQHDACGALVSIHARDGGTDANDWAEMLLRMYSHWAAEHDYTV 121 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E ++ D EEAGI SAT ++G AYG+LKGE G+HRLVRISP++S +R TSF+++ V Sbjct: 122 ELIDRADNEEAGINSATFAVRGVMAYGYLKGESGMHRLVRISPFNSEGKRQTSFAAVDVS 181 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P + DS E+EI E D RIDTYRASGAGGQHVN TDSA+R+TH+PTGVVVQCQ ERSQHKN Sbjct: 182 PEIPDSEEVEIDEEDVRIDTYRASGAGGQHVNKTDSAIRLTHLPTGVVVQCQNERSQHKN 241 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 +AQAW MLR+++ +E ++RE ++ ++G+G QIR+Y L P Q VKD RT Sbjct: 242 RAQAWKMLRSRIARIEEERREAEEAARYKTQAKVGFGSQIRNYFLHPDQRVKDARTGHYV 301 Query: 333 TSPSDVLDGDLDDFMKATL 351 S V+DGD+ F+ A L Sbjct: 302 GSFHAVMDGDIQGFLDAYL 320 >gi|225430898|ref|XP_002276037.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 454 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 144/339 (42%), Positives = 219/339 (64%), Gaps = 7/339 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + L+ L K D W + +A+ + + + I + + + ++ D +++L E D Sbjct: 109 EELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQVEDAETIVKLTEEMD 168 Query: 81 --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D +L+E ++ ++ + ++ + LLSG D A + + AGAGGT++QDWA+MLL Sbjct: 169 SIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLL 228 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW EK+++KT +E GEEAGIKSAT+ ++G AYG+L GE+G HR+VR SP+++ Sbjct: 229 RMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQSPFNA 288 Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 R TSFS + V P++ ++S+++EI E D I RA G GGQ+VN ++AVRITHIPT Sbjct: 289 KGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 348 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315 GV V+C +ERSQ NK +A + L+AKL + E Q+ EI I G++ K E WG+QIR+Y Sbjct: 349 GVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIRNY 406 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 V PY++VKD+RT E + + V+DG+L+ F+KA L K Sbjct: 407 VFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFK 445 >gi|254411738|ref|ZP_05025514.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC 7420] gi|196181460|gb|EDX76448.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC 7420] Length = 305 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 138/267 (51%), Positives = 192/267 (71%), Gaps = 2/267 (0%) Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 QE N+ ++ E++ + E LLSG D+N A L ++AGAGGT++QDWA MLLRMYTRWA Sbjct: 33 QEAQTNVVKLNRELDRWELEQLLSGPYDANGAVLAINAGAGGTDAQDWAEMLLRMYTRWA 92 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + +K + E +G+EAGIKSATL I+G AYG+LK E+G HRLVRISPY++N +R TS Sbjct: 93 ENQGYKVQLAEFSEGDEAGIKSATLEIQGLRAYGYLKAEKGTHRLVRISPYNANGKRQTS 152 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+ + V P++++ ++++I E+D I T R+ G GGQ+VN ++AVR+ HIPT + V+C Q Sbjct: 153 FAGVEVMPILNEDVDLDIPETDLEITTSRSGGKGGQNVNKVETAVRVKHIPTDIAVRCTQ 212 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ +NK +A +L+AKL + ++R +EIA I E WG QIR+YV PYQ+VK Sbjct: 213 ERSQLQNKEKALALLKAKLLVIAQEQRAQEIAEI-RGDMVEAAWGNQIRNYVFHPYQLVK 271 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 DLRTN+E T DVL+G LD F++A L Sbjct: 272 DLRTNVETTGVDDVLNGTLDPFIEAYL 298 >gi|297735238|emb|CBI17600.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 144/339 (42%), Positives = 219/339 (64%), Gaps = 7/339 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + L+ L K D W + +A+ + + + I + + + ++ D +++L E D Sbjct: 106 EELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQVEDAETIVKLTEEMD 165 Query: 81 --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D +L+E ++ ++ + ++ + LLSG D A + + AGAGGT++QDWA+MLL Sbjct: 166 SIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLL 225 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW EK+++KT +E GEEAGIKSAT+ ++G AYG+L GE+G HR+VR SP+++ Sbjct: 226 RMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQSPFNA 285 Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 R TSFS + V P++ ++S+++EI E D I RA G GGQ+VN ++AVRITHIPT Sbjct: 286 KGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 345 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSY 315 GV V+C +ERSQ NK +A + L+AKL + E Q+ EI I G++ K E WG+QIR+Y Sbjct: 346 GVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIRNY 403 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 V PY++VKD+RT E + + V+DG+L+ F+KA L K Sbjct: 404 VFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFK 442 >gi|139438906|ref|ZP_01772366.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC 25986] gi|133775617|gb|EBA39437.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC 25986] Length = 382 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 147/331 (44%), Positives = 201/331 (60%), Gaps = 5/331 (1%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--- 78 R+S L K+ P W + A+ M E I+ + + L D LELA E Sbjct: 34 RVSELEAKSVAPGFWDDADAARATMEEIARTKEDIAAVDTARGELSDARAALELAEEMGD 93 Query: 79 -EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D ++ +E + +R+ ++ + S +GE D DA + + G GG E+QDW ML Sbjct: 94 DPDAAALREEAAATAERLARAIDELELSSWFTGEFDHGDAIVTIKPGQGGLEAQDWTFML 153 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +MY ++ ++R +K + E GI AT ++G +A+G L+ E GVHRLVRISP D Sbjct: 154 FKMYMKYCQRRGWKVTINDCPAAEVIGIDRATFTVEGKDAFGMLRAEAGVHRLVRISPTD 213 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 RR T+F+ + V PV+ D I+IEIS D R+D Y ASG GGQ VNTTDSAVR+TH P+ Sbjct: 214 DKRRRQTTFAGVEVIPVLPDDIDIEISPDDIRVDVYHASGPGGQGVNTTDSAVRVTHFPS 273 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VV CQ ERSQ +NKA +L+A+LYE+EL+KR E + KT IG+G QIRSYVL Sbjct: 274 GIVVTCQNERSQIQNKAACMQILKARLYEIELEKRAEALDEIRGPKTTIGFGNQIRSYVL 333 Query: 318 QPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347 PYQMVKDLR+ +E ++ VL DGDLD F+ Sbjct: 334 YPYQMVKDLRSGVETSNVEAVLDDGDLDPFV 364 >gi|229032803|ref|ZP_04188759.1| Peptide chain release factor 2 [Bacillus cereus AH1271] gi|228728476|gb|EEL79496.1| Peptide chain release factor 2 [Bacillus cereus AH1271] Length = 272 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 142/269 (52%), Positives = 183/269 (68%), Gaps = 2/269 (0%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W + A+ ++ E L + +++ + + I EL EE D + +E ++ Sbjct: 6 FWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVKG 65 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 66 LIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVET 125 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 126 VDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPE 185 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D +EIEI D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 186 FNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNRE 245 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSK 303 A ML+AKLY+ +L+ E+ A + E+S+ Sbjct: 246 HAMKMLKAKLYQKKLE--EQQAELDENSR 272 >gi|294507807|ref|YP_003571865.1| peptide chain release factor RF-2 [Salinibacter ruber M8] gi|294344135|emb|CBH24913.1| peptide chain release factor RF-2 [Salinibacter ruber M8] Length = 349 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 148/333 (44%), Positives = 214/333 (64%), Gaps = 8/333 (2%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 LN + DP W + A+ + + + I ++++++ +++ L+L EE+ + Sbjct: 6 LNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWEDVKEQ-AEDIETLQLLSEEEGEDMS 64 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E +R++ +++ + ESLL D DA +E++ GAGGTESQDWA MLLRMY RWA Sbjct: 65 DEIDAEARRLEQKLDRLELESLLDDPDDERDAIVEINPGAGGTESQDWAEMLLRMYMRWA 124 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + + E + GEEAGIKSATL ++G +AYG LK E GVHRLVRISP+D++SRRHTS Sbjct: 125 EDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRLKSETGVHRLVRISPFDADSRRHTS 184 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI-------PTG 258 F+S++VYP VDDSI +++SE + + T+R+ G GGQHVN ++ VR+ T Sbjct: 185 FASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQHVNKVETGVRLIWTGTLSNGEETT 244 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 V C QERSQH+N+ +A ML++++Y+ E + +EE ESSK I WG QIRSYVL Sbjct: 245 VRAACTQERSQHQNRRRAREMLKSRIYQAERELKEEEKERLESSKKSIEWGSQIRSYVLH 304 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY+MV D RT+ ++ VL+G LD F+KA L Sbjct: 305 PYKMVNDHRTDTKRNDAEAVLEGGLDPFIKAYL 337 >gi|257063623|ref|YP_003143295.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM 20476] gi|256791276|gb|ACV21946.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM 20476] Length = 369 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 143/326 (43%), Positives = 207/326 (63%), Gaps = 4/326 (1%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L LN + P W + A + + + + + + + L D EL+ +++ Sbjct: 34 LEKLNEEIASPDFWNDSQNALQVSKRASEVRSILDEYEHVASLLEDARTADELSADDE-- 91 Query: 83 SILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + E D L+R + ++ + S SGE D DA + ++ G GG E+QDW +ML +MY Sbjct: 92 -MFAEERDELRRQLSDLLDGLEVSSWFSGEMDPCDAIVSINPGQGGLEAQDWVDMLYKMY 150 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 +++AEK+ +K L+I GE G+ A + I+G NAYG L+ E GVHRLVRISP D R Sbjct: 151 SKYAEKKGWKVRLLDITPGEVIGLDRAVIQIEGKNAYGMLRSENGVHRLVRISPTDDKKR 210 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R T+F+ + V PVVDD IE++++ +D R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV Sbjct: 211 RQTTFAGVEVLPVVDDEIEVDLNVNDVRVDVYRSSGPGGQCVNTTDSAVRLTHIPTGIVV 270 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ++SQ +NK A+ +LRAKLYELE QKREE + + + +G QIR+YVL PYQ Sbjct: 271 TCQNQKSQLQNKDAAFKVLRAKLYELERQKREEEIDALRGERMDNSFGSQIRNYVLYPYQ 330 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFM 347 +VKDLR+ IE + VL GD+++F+ Sbjct: 331 LVKDLRSGIETGNVDAVLSGDIEEFV 356 >gi|28493165|ref|NP_787326.1| peptide chain release factor 2 [Tropheryma whipplei str. Twist] gi|28572722|ref|NP_789502.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27] gi|28410855|emb|CAD67240.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27] gi|28476205|gb|AAO44295.1| peptide chain release factor RF-2 [Tropheryma whipplei str. Twist] Length = 376 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 143/333 (42%), Positives = 207/333 (62%), Gaps = 5/333 (1%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R++ L + DP LW A+ + RE + + ++ +L + +L+ L E Sbjct: 31 KRIAELTARVSDPDLWTTPDRAQQIARELSITKAQLDRLTNLEAQLDEMRVLVTLLENEH 90 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D +L E S + + E + +++L+ E D A L + AGAGG ++ D+A MLLRM Sbjct: 91 DAGLLDEGSRKAKLLLEEANHLLIQNMLNNEYDCYPAVLTIRAGAGGIDAADFAQMLLRM 150 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWA+K + ++I EEAGI+SATL I P A+G L E G HRLVRISP+++ Sbjct: 151 YIRWAQKHSSEAIVMDISYAEEAGIRSATLRIDLPFAFGKLHQESGTHRLVRISPFNAAG 210 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+++ V P++++ IEI+ + RID +R+SG GGQ VNTTDSAVRITH+PTG+V Sbjct: 211 KRHTSFAAVEVIPLLEEVSSIEITNDEIRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIV 270 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--GWGRQIRSYVLQ 318 V CQ E+SQ +N+ A +LRA+L L KR+E A I + I WG Q+R+YVL Sbjct: 271 VSCQNEKSQIQNRESAMRILRARLL---LNKRQEEAAIRKELAGNIVASWGEQVRNYVLA 327 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PYQ+VKDLR+ E + P V DGD+D F+ A + Sbjct: 328 PYQLVKDLRSLHESSMPDKVFDGDIDGFIDAGI 360 >gi|266622716|ref|ZP_06115651.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479] gi|288865539|gb|EFC97837.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479] Length = 275 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 129/264 (48%), Positives = 193/264 (73%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E+P W++ ++ +++ ++L + ++ K+++ + D +++E+ EE+D S++ E + Sbjct: 2 EEPGFWEDPEKSTKIVQLAKNLKDTVNGYKDLEQQYEDIGVMIEMGNEENDPSVVPEVEE 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L+ K ++E + +LLSGE DS++A L ++AGAGGTES DW +ML RMY RWAEK+ + Sbjct: 62 MLKEFKDKLEEIRINTLLSGEYDSDNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKGY 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E L+ DGEEAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 122 SVEVLDYLDGEEAGIKSVTIQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCD 181 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ ++++I+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 182 VMPDIEEDLDVDINEEDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQF 241 Query: 271 KNKAQAWNMLRAKLYELELQKREE 294 +NK +A ML+AKLY L+ Q+ E Sbjct: 242 QNKDKAMQMLKAKLYMLKQQENAE 265 >gi|84494447|ref|ZP_00993566.1| peptide chain release factor 2 [Janibacter sp. HTCC2649] gi|84383940|gb|EAP99820.1| peptide chain release factor 2 [Janibacter sp. HTCC2649] Length = 370 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 146/325 (44%), Positives = 204/325 (62%), Gaps = 13/325 (4%) Query: 33 PHLWQNVIEAK----MLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQE 87 P LW + +A+ +L R + D D D+L L+E+ EE+D L E Sbjct: 42 PDLWDDQEKAQAVTSLLSRAKAEYDRVTGM-----DTKVDDLEALVEMGQEENDAETLLE 96 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 L+ +K V + +LLSGE D A + + AGAGG ++ D+A ML+RMY RWAE+ Sbjct: 97 AEKELKIVKKAVGELEVRTLLSGEWDERSAVVTIRAGAGGVDAADFAEMLMRMYLRWAER 156 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + T+ ++ EEAGIKSAT + P A+G L E G HRLVRISP+D+ RR TSF Sbjct: 157 HGYPTKVMDTSYAEEAGIKSATFEVNVPYAFGNLSVEGGTHRLVRISPFDNQGRRQTSFV 216 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P+++ + IEI E+D +ID +R+SG GGQ VNTTDSAVR+THIPTG VV Q E+ Sbjct: 217 AVEVIPLIEGTDSIEIPENDLKIDVFRSSGPGGQSVNTTDSAVRMTHIPTGTVVSMQNEK 276 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDL 326 SQ +N+A A +++++L L L++ EE A E + + WG Q+RSYVL PYQMVKDL Sbjct: 277 SQIQNRAAALRVMQSRL--LLLKRAEEAAVKKEMAGDVKASWGDQMRSYVLNPYQMVKDL 334 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351 RT E +P+ V DGD+D F++A + Sbjct: 335 RTEFETGNPTAVFDGDIDGFIEAGI 359 >gi|159898428|ref|YP_001544675.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC 23779] gi|159891467|gb|ABX04547.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC 23779] Length = 337 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 146/331 (44%), Positives = 207/331 (62%), Gaps = 10/331 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE--LALEEDDCS 83 L + +P LW N +A+ +++ + + ++ D L +L L L L DD Sbjct: 4 LEHQAAEPSLWDNPQQAQSILQRLARMQEEL----KMWDSLAVDLATLRDLLQLSADDAD 59 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L + + + V+ + LL + DS +A++ + +GAGG ESQDWA MLLRMY+R Sbjct: 60 SLSQIEREVNGLTKSVDQLELSILLGEKYDSTNAFISIQSGAGGVESQDWAQMLLRMYSR 119 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E + F+T +++ DGEEAGIKSATL ++GP AYG+ K E G+HRLVR+SP+D+N RRH Sbjct: 120 WGESQGFRTTIVDMMDGEEAGIKSATLELRGPYAYGYAKAEAGIHRLVRLSPFDANHRRH 179 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVV 260 TSF+ + V P VDD+ E++I+ D R+D YRA G GGQ VNTTDSAVR+ + P ++ Sbjct: 180 TSFARVEVLPEVDDAAEVKINPEDLRVDVYRAGGHGGQGVNTTDSAVRLVYRGGTPDEII 239 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 V CQ ERSQ +NK A N+LRA+L E EL ++ + + WG QIRSYVL Sbjct: 240 VTCQNERSQLQNKETAMNVLRARLLERELARQVAERAKLKGEHRDAAWGNQIRSYVLDD- 298 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN+E ++ VLDG++D F+ A L Sbjct: 299 RRVKDHRTNVETSNTQAVLDGEIDLFIDAFL 329 >gi|110639213|ref|YP_679422.1| peptide chain release factor 2 [Cytophaga hutchinsonii ATCC 33406] gi|110281894|gb|ABG60080.1| bacterial peptide chain release factor 2 (bRF-2) [Cytophaga hutchinsonii ATCC 33406] Length = 358 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 127/252 (50%), Positives = 184/252 (73%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F+ +LS E D A LE++ GAGGTES DWA+ML+RMY W EK + + GE Sbjct: 107 EFKKMLSAEEDQLSAVLEINPGAGGTESNDWADMLMRMYIMWGEKNGYTVREIVNQPGEV 166 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIK A+L I+G AYG LK E GVHRLVR SP++++ +R TSF+S++VYP VD++I IE Sbjct: 167 AGIKFASLGIEGQFAYGNLKSEIGVHRLVRDSPFNADGKRQTSFASVYVYPEVDETINIE 226 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ D DT+RA GAGGQ+VN ++AVR+ H P+G++++CQQERSQ +NK +A +L++ Sbjct: 227 INMGDVEWDTFRAGGAGGQNVNKVETAVRLKHKPSGLIIECQQERSQIQNKDKALKLLKS 286 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +LY++E+ KR E E +K +I +G QIR+YVL PY+++KD+RT +E+T +VL GD Sbjct: 287 RLYQIEIDKRNEAKAAVEGTKKKIDFGSQIRNYVLFPYKLIKDVRTGVERTDVDNVLAGD 346 Query: 343 LDDFMKATLAIK 354 L++++KA L +K Sbjct: 347 LNEYIKAYLLMK 358 >gi|257060501|ref|YP_003138389.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802] gi|256590667|gb|ACV01554.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802] Length = 375 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 151/338 (44%), Positives = 218/338 (64%), Gaps = 10/338 (2%) Query: 23 LSFLNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 L LN +D P W N A+ +++ L +++ + +L D + EL Sbjct: 36 LPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQWMGQLEDLKAIAEL 95 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E+D ++ +E NL ++ E++ + + LLSG DS A L ++AGAGGT++QDWA Sbjct: 96 LELEEDATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTINAGAGGTDAQDWAE 155 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 MLLRMYTRW E++ +K EI +G+EAGIKSATL I+G AYG+LKGE+G HRLVRISP Sbjct: 156 MLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLVRISP 215 Query: 196 YDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +++N +R TSF+ I V P +++ +++EI E D I T R+ G GGQ+VN ++AVR+ H Sbjct: 216 FNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGGQNVNKVETAVRVVH 275 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313 +PTG+ V+C QERSQ +NK +A +L+AKL + ++R + IA I E WG QIR Sbjct: 276 LPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEI-RGDMVEAAWGNQIR 334 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +YV PYQMVKD+RTN E T + V+DG LD F+++ L Sbjct: 335 NYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYL 372 >gi|291550769|emb|CBL27031.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus torques L2-14] Length = 320 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 147/309 (47%), Positives = 215/309 (69%), Gaps = 1/309 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV-EYKQF 104 M+E + L +++ I ++ D L+L+E++ ED+ E + EV E + Sbjct: 1 MKELKGLQDSVKEIDKLFTDYEDMLLLIEMSEGEDEEQEAAEEIEEELGTFEEVFEKLRI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +LL G D+++A + +HAGAGGTE+ DW ML RMY+RWAEK+ ++ E L+ +G+ AG Sbjct: 61 STLLIGPYDADNAIVTLHAGAGGTEAMDWTGMLYRMYSRWAEKKGYEVEMLDYLEGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IK T +KG NAYG+L+ E+GVHRLVRISP+++N +R TSF+S V P +++ I+IEI+ Sbjct: 121 IKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNANGKRQTSFASCDVIPDIEEDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQH NK +A ML++KL Sbjct: 181 DDDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 Y L+ Q++ E + +I +G QIRSYV+QPY +VKD RTN E ++ V+DG++D Sbjct: 241 YVLKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTLVKDHRTNAEISNVGAVMDGNID 300 Query: 345 DFMKATLAI 353 F+ A L++ Sbjct: 301 PFINAYLSM 309 >gi|326511439|dbj|BAJ87733.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 517 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 142/340 (41%), Positives = 219/340 (64%), Gaps = 7/340 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL--CDNLILLELAL 77 ++ ++ L K+ D LW + +A+ L+ L + + + + ++ D ++ L L Sbjct: 169 LEEIASLENKSGDSTLWDDPSKAQELLVALTELKEKVKLLNDFKSQVEEADTIVQLTEEL 228 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 + D +L+E S ++ + ++ + LLSG D + A + + AGAGGT++QDWA+ML Sbjct: 229 DSIDTGLLEEASKIIKALNKALDNFEMTRLLSGPYDKDGAVITISAGAGGTDAQDWADML 288 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 LRMY RW EK+++K+ +E GEEAGIKSAT+ ++G AYG+L GE+G HR+VR SP++ Sbjct: 289 LRMYVRWGEKQRYKSRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFN 348 Query: 198 SNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 + R TSF+ + V P++ ++S+++EI E D I RA G GGQ+VN ++AVR+ HIP Sbjct: 349 AKGLRQTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIP 408 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRS 314 TG+ V+C +ERSQ NK +A L+AKL + E Q+ EI I G++ K E WG+QIR+ Sbjct: 409 TGIAVRCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIRN 466 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 YV PY++VKD+RT E + S V+DG+LD F+KA L K Sbjct: 467 YVFHPYKLVKDVRTACETSDISGVMDGELDPFIKAYLQYK 506 >gi|218248175|ref|YP_002373546.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801] gi|226739124|sp|B7K0A6|RF2_CYAP8 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|218168653|gb|ACK67390.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801] Length = 365 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 151/338 (44%), Positives = 218/338 (64%), Gaps = 10/338 (2%) Query: 23 LSFLNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 L LN +D P W N A+ +++ L +++ + +L D + EL Sbjct: 26 LPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQWMGQLEDLKAIAEL 85 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E+D ++ +E NL ++ E++ + + LLSG DS A L ++AGAGGT++QDWA Sbjct: 86 LELEEDATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTINAGAGGTDAQDWAE 145 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 MLLRMYTRW E++ +K EI +G+EAGIKSATL I+G AYG+LKGE+G HRLVRISP Sbjct: 146 MLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLVRISP 205 Query: 196 YDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +++N +R TSF+ I V P +++ +++EI E D I T R+ G GGQ+VN ++AVR+ H Sbjct: 206 FNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGGQNVNKVETAVRVVH 265 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIR 313 +PTG+ V+C QERSQ +NK +A +L+AKL + ++R + IA I E WG QIR Sbjct: 266 LPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEI-RGDMVEAAWGNQIR 324 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +YV PYQMVKD+RTN E T + V+DG LD F+++ L Sbjct: 325 NYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYL 362 >gi|291295687|ref|YP_003507085.1| LigA [Meiothermus ruber DSM 1279] gi|290470646|gb|ADD28065.1| LigA [Meiothermus ruber DSM 1279] Length = 365 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 154/352 (43%), Positives = 214/352 (60%), Gaps = 11/352 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L G D RL L+ + DP LW + A+ + +E L A+ + + Sbjct: 6 LEHRLEALRGYLDIAGKEARLKELDRQINDPSLWNDPAHARKISQEAARLRKAVEGYRRL 65 Query: 63 QDRLCDNLIL-LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L L L EL+ EE + + L+R E+E ++LL N A + + Sbjct: 66 ESDLQGLLELWPELSPEERE-----QMQPELERAGRELEELYHQTLLGFPYAENAAIVTI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTE+ DWA ML RMYTR+AE++ F E +++ G EAGI A +++G NAYG L Sbjct: 121 KPGAGGTEACDWAQMLYRMYTRFAERKGFSLELVDLEPGAEAGIDQAQFIVRGENAYGLL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVR SP+++ +R TSF+++ V P VD+S++I+I+ D RID R+ G GGQ Sbjct: 181 SAEAGVHRLVRPSPFNAQGKRQTSFAAVEVMPEVDESVDIQIAPEDLRIDVMRSQGKGGQ 240 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-G 299 VNTTDSAVR+ H+PTG+ V+CQ RSQ KNK A N+LR+KL+E+E +K+ EE+A + G Sbjct: 241 GVNTTDSAVRVVHLPTGIFVKCQVTRSQQKNKEMALNILRSKLFEIEWKKKQEELARLKG 300 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ES E WG QIRSYVL Q +KD RT + P +VLDGDL+ + A L Sbjct: 301 ESRPIE--WGSQIRSYVLD-KQYIKDHRTGEMRHDPENVLDGDLESLIWAGL 349 >gi|86159138|ref|YP_465923.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775649|gb|ABC82486.1| bacterial peptide chain release factor 2 (bRF-2) [Anaeromyxobacter dehalogenans 2CP-C] Length = 309 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 144/270 (53%), Positives = 193/270 (71%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L ELA E D + E ++ + + ++E + + +LSG D+ A +EV Sbjct: 8 VRRSLDDAQALNELAEEARDEATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVEV 67 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG E+ DWA ML RMY R+ E+R ++ E ++ GEEAGI SA+ +++G + YGWL Sbjct: 68 KSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGWL 127 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D N+RR TSF+++ V P +DD I I+I E+D RIDTYR+SGAGGQ Sbjct: 128 KAERGVHRLVRISPFDQNARRQTSFAAVDVTPEIDDDIVIDIKEADVRIDTYRSSGAGGQ 187 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VN TDSAVR+TH+PTG+VV Q ERSQ KN+ AW +LRAKLY+LE +KR + E+ Sbjct: 188 KVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRNVAWKILRAKLYDLEEKKRAAARDAAEA 247 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +I +G QIRSYVLQPYQMVKDLRT +E Sbjct: 248 LKKDIDFGSQIRSYVLQPYQMVKDLRTGVE 277 >gi|229815728|ref|ZP_04446053.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM 13280] gi|229808644|gb|EEP44421.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM 13280] Length = 377 Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 148/335 (44%), Positives = 202/335 (60%), Gaps = 4/335 (1%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILL 73 D A R+ L + P W + A+ M E + ++ + ++RL D L L Sbjct: 31 DEARGRVGELEQASAAPGFWDDADAARAHMAELAQVKGDVALVDGARERLSDARAALELA 90 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E EE + E ++ + ++ + S +GE D A L + G GG E+QDW Sbjct: 91 EEMGEEGGAEFVAEATEAAAELTHSIDEMELSSWFTGEFDHGSAILSIKPGQGGLEAQDW 150 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 ML +MY ++ +R +K + E GI AT+ ++G +A+G L+ E GVHRLVRI Sbjct: 151 TFMLFKMYMKYCARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFGMLRAEAGVHRLVRI 210 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP D+ RR T+F+ + V PV+ D I+IE++ D R+D Y ASG GGQ VNTTDSAVR+T Sbjct: 211 SPTDAKKRRQTTFAGVEVIPVLPDDIQIEVAPDDIRVDVYHASGPGGQGVNTTDSAVRVT 270 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV CQ ERSQ +NKA +L+A+LYELELQKRE+ + KTEIG+G QIR Sbjct: 271 HIPTGIVVTCQNERSQIQNKAACMQILKARLYELELQKREDTLDEIRGPKTEIGFGNQIR 330 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347 SYVL PYQMVKDLR +E ++ VL DGDLD F+ Sbjct: 331 SYVLYPYQMVKDLRCGVETSNVDGVLEDGDLDPFI 365 >gi|113475767|ref|YP_721828.1| peptide chain release factor 2 [Trichodesmium erythraeum IMS101] gi|110166815|gb|ABG51355.1| bacterial peptide chain release factor 2 (bRF-2) [Trichodesmium erythraeum IMS101] Length = 288 Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 136/273 (49%), Positives = 192/273 (70%) Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D S+L E + + + E++ + + LLSG D N A + ++AGAGGT++QDWA MLL Sbjct: 4 ETDESLLAEANLTIANLNQELDQWELQQLLSGLYDQNGAVVTINAGAGGTDAQDWAEMLL 63 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRW E+ K+K + EI +G+EAG+KSATL I G AYG+LK E+G HRLVRISP+++ Sbjct: 64 RMYTRWGEEHKYKVQLAEISEGDEAGLKSATLEIIGRYAYGYLKAEKGTHRLVRISPFNA 123 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+ + V P++D S+E++I E D I T R+ G GGQ+VN ++AVR+ HIPTG Sbjct: 124 NGKRQTSFAGVEVMPILDHSVELDIPEKDLEITTSRSGGKGGQNVNKVETAVRVVHIPTG 183 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 + V+C QERSQ +NK +A +L+A+L + ++R + N E WG QIR+YV Sbjct: 184 LSVRCTQERSQLQNKDKALALLKARLLIIAQEQRAQEINEIRGDMVEAAWGNQIRNYVFH 243 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PYQMVKDLRT E T+ +DV++G+LD F++A L Sbjct: 244 PYQMVKDLRTQKETTAINDVMNGELDQFIEAYL 276 >gi|119025481|ref|YP_909326.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC 15703] gi|154486912|ref|ZP_02028319.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis L2-32] gi|118765065|dbj|BAF39244.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC 15703] gi|154084775|gb|EDN83820.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis L2-32] Length = 376 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 141/338 (41%), Positives = 205/338 (60%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D L K +P LW + A+ + + + + + + R+ D L+ Sbjct: 24 LDVDRLTAEAKDLEVKAAEPGLWDDPENAQKVTSKLSAVQSQLKRLASADQRIEDVETLV 83 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EE+D L E ++ I+ +++ + ++LL GE D A + + +GAGG ++ D+ Sbjct: 84 ELGQEEEDADTLAEAKAEVESIQKDLDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG L E G HRLVRI Sbjct: 144 AQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRI 203 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ VNTT SAVRIT Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAVRIT 263 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV Q ERSQ +N+A A +L+++L L + E + + WG Q+R Sbjct: 264 HIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL PYQMVKDLRT E + V DGD+D+F++A + Sbjct: 323 SYVLHPYQMVKDLRTGYETSQTQAVFDGDIDEFIEAGI 360 >gi|171741050|ref|ZP_02916857.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC 27678] gi|283455565|ref|YP_003360129.1| peptide chain release factor 2 [Bifidobacterium dentium Bd1] gi|171276664|gb|EDT44325.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC 27678] gi|283102199|gb|ADB09305.1| prfB Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium dentium Bd1] Length = 380 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 207/338 (61%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D + L + +P LW + A+ + + + + + + R+ D L+ Sbjct: 28 LDVDRLTAQAKELEVQAAEPGLWDDPENAQKITSKLSAVQSQLKRLSSASQRIDDVETLV 87 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EE+D L+E + ++ I+ +++ + ++LL GE D A + + +GAGG ++ D+ Sbjct: 88 ELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 147 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + E G HRLVRI Sbjct: 148 AQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRLVRI 207 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ VNTT SAVRIT Sbjct: 208 SPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAVRIT 267 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV Q ERSQ +N+A A +L+++L L + E + + WG Q+R Sbjct: 268 HIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL PYQMVKDLRT E + V DGD+D F++A + Sbjct: 327 SYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGI 364 >gi|197302438|ref|ZP_03167493.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC 29176] gi|197298336|gb|EDY32881.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC 29176] Length = 339 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 150/329 (45%), Positives = 225/329 (68%), Gaps = 1/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + + E+P W N ++ +M+E + L +++ I+++ D L+L++++ ED+ Sbjct: 1 MEKRLEEPGFWDNPEVSQQVMKELKGLQDSVKEIEKLYTDYEDMLLLIDMSAGEDEEEET 60 Query: 86 QETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E LQ+ + E + +LL G D ++A + +HAGAGGTE+ DW ML RMY+RW Sbjct: 61 AEEVAEELQQFEAVFEQLRISTLLIGPYDRDNAIVTLHAGAGGTEAMDWTGMLYRMYSRW 120 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AEK+ ++ E L+ +G+ AGIK T +KG NAYG+L+ E+GVHRLVRISP+++ +R T Sbjct: 121 AEKKGYELEVLDYLEGDVAGIKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNAAGKRQT 180 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S V P +++ I+IEI+E + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ Sbjct: 181 SFASCDVIPDIEEDIDIEINEDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQ 240 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQH NK +A ML++KL L+ Q++ E + ++I +G QIRSYV+QPY MVK Sbjct: 241 NERSQHMNKDKAMQMLKSKLLLLKQQEQAEKMSDIRGEVSDINFGNQIRSYVMQPYTMVK 300 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 D RTN E ++ V+DG++D F+ A L++ Sbjct: 301 DHRTNAEISNVGAVMDGNIDPFINAYLSM 329 >gi|24638472|sp|P96314|RF2_BACFI RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 294 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 138/282 (48%), Positives = 191/282 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++L G D + +R++ L+ P W + A+ ++ E L ++ E+ Sbjct: 13 MAKRLTDFRGSLDLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +++ + + EL EE D + +E ++ + + + + LLS D N+A LE+H Sbjct: 73 EEKYENLEVSYELVKEEADEELEKELEAGVKELISRLNDFELQLLLSEPYDKNNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRW+E+R FK E ++ G+EAG+KS TLLIKG NAYG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +DD++EI+I D ++DTYRASGAGGQH Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +NTTDSA+RITH+PT VV CQ ERSQ KN+ QA ML+AKL Sbjct: 253 INTTDSAIRITHLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 294 >gi|203287543|ref|YP_002222558.1| peptide chain release factor RF-2 [Borrelia recurrentis A1] gi|201084763|gb|ACH94337.1| peptide chain release factor RF-2 [Borrelia recurrentis A1] Length = 347 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 153/350 (43%), Positives = 219/350 (62%), Gaps = 8/350 (2%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG FD D +L + + + W + A+ +++ + L I K + +L Sbjct: 1 MKMYGGSFDSDKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWKNLICQL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAG 124 D L ++A EDD +IL+ + KL +YK +L + D N A+L +H+G Sbjct: 61 KDLRELCKIAESEDDKAILERDVN-----KLREQYKHILTLSYFKEDIDINSAFLTIHSG 115 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+ DW NML R Y R++E+R +K E +++ + E GIKS T+ IKG AYG+LK E Sbjct: 116 AGGTEACDWVNMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSE 174 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G+HRLVRISP+D+ +RHTSF+S+++ PV+DD IEI I D R+DTYRASGAGGQHVN Sbjct: 175 VGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKSEDIRVDTYRASGAGGQHVN 234 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVRITH+ TG+V Q Q +RSQH+NK A +L++KLYE ++ + + K Sbjct: 235 KTSSAVRITHLKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKK 294 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +I WG QIRSY+ QPY +VKD RT E + V+DG++D+F++ L K Sbjct: 295 DISWGNQIRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWK 344 >gi|119486315|ref|ZP_01620374.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106] gi|119456528|gb|EAW37658.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106] Length = 308 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 142/290 (48%), Positives = 197/290 (67%), Gaps = 2/290 (0%) Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D ++EL E D S+L E NL R+ +++ + + LLS D N A L ++ Sbjct: 8 QKTIEDTDAIVELLELESDESLLAEAESNLTRLNHDLDRWELQQLLSAPYDKNGAVLTIN 67 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGT++QDWA MLLRMYTRW E +K E+ +G+EAGIKS TL I+G AYG+LK Sbjct: 68 AGAGGTDAQDWAEMLLRMYTRWGEAHGYKVYLAELSEGDEAGIKSVTLEIEGRYAYGYLK 127 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+G HRLVRISP+++N +R TSF+ + + P++D + +EI E D + T RA G GGQ+ Sbjct: 128 CEKGTHRLVRISPFNANGKRQTSFAGVEIMPMIDQGVHLEIPEKDLEVTTSRAGGKGGQN 187 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301 VN ++AVRI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R +EIA I Sbjct: 188 VNKVETAVRIVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEI-RG 246 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E WG QIR+YV PYQMVKDLRT+ E T+ DV++G+LD F++A L Sbjct: 247 DLVEAAWGNQIRNYVFHPYQMVKDLRTSEETTAIDDVMNGELDRFIQAYL 296 >gi|309810763|ref|ZP_07704570.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185] gi|308435300|gb|EFP59125.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185] Length = 370 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 146/351 (41%), Positives = 219/351 (62%), Gaps = 17/351 (4%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL------ 66 + D + +++ L ++ P LW + A Q + +A+S DR+ Sbjct: 22 VLDLEKLKKQIVDLEEQSAAPDLWDDPDAA-------QKITSALSRANAENDRVENMDAA 74 Query: 67 CDNL-ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 D+L +L+E+ EE+D L E L++++ V + +LL+GE D +A + + AGA Sbjct: 75 IDDLEVLVEMGTEENDADTLAEAERELKKLQKAVGELEVRTLLNGEFDEREAVVTIRAGA 134 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG ++ D+A ML+RMY RWAE+ + T+ ++ EEAG+KS T + P A+G L E Sbjct: 135 GGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSVTFEVNVPYAFGNLSVEA 194 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HRLVRISP+D+ RR TSF+++ V P+++ + IEI E++ +ID +R+SG GGQ VNT Sbjct: 195 GTHRLVRISPFDNQGRRQTSFAAVEVVPLIETTDTIEIPENELKIDVFRSSGPGGQSVNT 254 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKT 304 TDSAVR+THIPTG VV Q E+SQ +N+A A +++++L L L+K+EE A E + Sbjct: 255 TDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRL--LLLKKQEEDAQKKELAGDI 312 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E + S V DGD+D F++A + K+ Sbjct: 313 KASWGDQMRSYVLHPYQMVKDLRTEYEVGNTSGVFDGDIDGFIEAGIRWKR 363 >gi|1865700|emb|CAA67778.1| peptide release factor 2 [Bacillus firmus] Length = 282 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 138/282 (48%), Positives = 191/282 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++L G D + +R++ L+ P W + A+ ++ E L ++ E+ Sbjct: 1 MAKRLTDFRGSLDLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLEL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +++ + + EL EE D + +E ++ + + + + LLS D N+A LE+H Sbjct: 61 EEKYENLEVSYELVKEEADEELEKELEAGVKELISRLNDFELQLLLSEPYDKNNAILELH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRW+E+R FK E ++ G+EAG+KS TLLIKG NAYG+LK Sbjct: 121 PGAGGTESQDWASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLK 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +DD++EI+I D ++DTYRASGAGGQH Sbjct: 181 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +NTTDSA+RITH+PT VV CQ ERSQ KN+ QA ML+AKL Sbjct: 241 INTTDSAIRITHLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 282 >gi|125558711|gb|EAZ04247.1| hypothetical protein OsI_26391 [Oryza sativa Indica Group] Length = 457 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 139/343 (40%), Positives = 221/343 (64%), Gaps = 7/343 (2%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL--CDNLILLE 74 D + ++ L K+ D LW + +A+ ++ + + + + +++ ++ + ++ L Sbjct: 106 DQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLLNDLKSQVEEAETIVKLT 165 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L+ D +L+E S ++ + ++ + LLSG D A + + AGAGGT++QDWA Sbjct: 166 EELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINITAGAGGTDAQDWA 225 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +MLLRMY RW EK+++KT +E GEEAGIKSAT+ ++G AYG+L GE+G HR+VR S Sbjct: 226 DMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQS 285 Query: 195 PYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 P+++ R TSF+ + V P++ ++S+++EI E D I RA G GGQ+VN ++AVR+ Sbjct: 286 PFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMV 345 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQ 311 HIPTG+ V+C +ERSQ NK +A + L+AKL + E Q+ EI I G++ K E WG+Q Sbjct: 346 HIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQ 403 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+YV PY++VKD+RT E + + V+DG+LD F++A L K Sbjct: 404 IRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 446 >gi|306823395|ref|ZP_07456770.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC 27679] gi|309802644|ref|ZP_07696748.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022] gi|304553102|gb|EFM41014.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC 27679] gi|308220708|gb|EFO77016.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022] Length = 380 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 207/338 (61%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D + L + +P LW + A+ + + + + + + R+ D L+ Sbjct: 28 LDVDRLTVQAKELEVQATEPGLWDDPENAQKITSKLSAVQSQLKRLASASQRIDDVETLV 87 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EE+D L+E + ++ I+ +++ + ++LL GE D A + + +GAGG ++ D+ Sbjct: 88 ELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 147 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + E G HRLVRI Sbjct: 148 AQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRLVRI 207 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ VNTT SAVRIT Sbjct: 208 SPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAVRIT 267 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV Q ERSQ +N+A A +L+++L L + E + + WG Q+R Sbjct: 268 HIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 326 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL PYQMVKDLRT E + V DGD+D F++A + Sbjct: 327 SYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGI 364 >gi|229817216|ref|ZP_04447498.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM 20098] gi|229785005|gb|EEP21119.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM 20098] Length = 373 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 141/338 (41%), Positives = 206/338 (60%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D +++ L + +P LW + A+ + + + + R+ D L+ Sbjct: 24 LDMDRLKAQIAELEQQAAEPGLWDDPENAQKVTSRLSAAQSQLKRLNSASQRIDDVETLV 83 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EE+D L E + +++I+ +++ + ++LL GE D A + + +GAGG ++ D+ Sbjct: 84 ELGQEEEDADTLAEAQEEVKKIQSDLDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L E G HRLVRI Sbjct: 144 AQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRI 203 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RR TSF+++ V P+V+ + I+I +SD R+DTY +SG GGQ VNTT SAVRIT Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDSDIRVDTYCSSGPGGQGVNTTYSAVRIT 263 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+PTG+VV Q ERSQ +N+A A +L+++L L + E + + WG Q+R Sbjct: 264 HLPTGLVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL PYQMVKDLRT E + V DGDLD F++A + Sbjct: 323 SYVLHPYQMVKDLRTGYETSQTQAVFDGDLDGFIQAGI 360 >gi|225350864|ref|ZP_03741887.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158320|gb|EEG71562.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 376 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 140/338 (41%), Positives = 204/338 (60%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D + L + +P LW N A+ + + + + + + R+ D L+ Sbjct: 24 LDVDRLTAQAKDLEVQAAEPGLWDNPENAQKVTSKLSAVQSQLKRLASASQRIDDVETLV 83 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EE+D L E ++ I+ ++ + ++LL GE D A + + +GAGG ++ D+ Sbjct: 84 ELGQEEEDADTLAEAQSEVESIQNDLADMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + E G HRLVRI Sbjct: 144 AQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRLVRI 203 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ VNTT SAVRIT Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAVRIT 263 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV Q ERSQ +N+A A +L+++L L + E + + WG Q+R Sbjct: 264 HIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL PYQMVKDLRT E + V DGD+D F++A + Sbjct: 323 SYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGI 360 >gi|212716462|ref|ZP_03324590.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM 16992] gi|212660715|gb|EEB21290.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM 16992] Length = 376 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 140/338 (41%), Positives = 204/338 (60%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D + L + +P LW + A+ + + + + + + R+ D L+ Sbjct: 24 LDVDRLTAQAKDLEVQAAEPGLWDDPENAQKVTSKLSAVQSQLKRLSSASQRIDDVETLV 83 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EEDD L E ++ I+ ++ + ++LL GE D A + + +GAGG ++ D+ Sbjct: 84 ELGQEEDDADTLAEARSEVESIQNDLADMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + E G HRLVRI Sbjct: 144 AQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRMSVEGGTHRLVRI 203 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ VNTT SAVRIT Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQGVNTTYSAVRIT 263 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VV Q ERSQ +N+A A +L+++L L + E + + WG Q+R Sbjct: 264 HIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL PYQMVKDLRT E + V DGD+D F++A + Sbjct: 323 SYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGI 360 >gi|295105719|emb|CBL03262.1| peptide chain release factor 2 [Gordonibacter pamelaeae 7-10-1-b] Length = 363 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 150/337 (44%), Positives = 211/337 (62%), Gaps = 4/337 (1%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 G D+ L+ L+ + P W + A+ + ++ +L I E L D Sbjct: 20 GFLHIDDKTAELAKLDEEIAAPGFWDDAAHAQGVSKQASNLRETIREYDEAAALLEDARA 79 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LELA E+ + E D L R+ ++ + S S D DA L V+ G+GG E+Q Sbjct: 80 ALELAGED--EAFAAEADDALARLSDLLDALEITSWFSERFDGGDAILTVNPGSGGLEAQ 137 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW +ML RMY R+AEK+ +K L++ GE G+ AT+ I+G NA+G LK E GVHRLV Sbjct: 138 DWTDMLYRMYVRYAEKKDWKVTILDVVPGEGIGLDKATIQIEGRNAFGMLKSENGVHRLV 197 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP D RRHT+F+ + V PV+ D IE++++ +D R+D YR+SG GGQ VNTTDSAVR Sbjct: 198 RISPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQCVNTTDSAVR 257 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGR 310 +THIPT +VV CQ E+SQ +NK A+ +L+AKLYE E QKR +E+A + + + +G Sbjct: 258 LTHIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRAQELAEL-RGDRMDNTFGS 316 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 QIR+YVL PYQMVKD+R+ +E + VLDGDL++F+ Sbjct: 317 QIRNYVLYPYQMVKDVRSGVETGNVDAVLDGDLEEFV 353 >gi|158317542|ref|YP_001510050.1| peptide chain release factor 2 [Frankia sp. EAN1pec] gi|158112947|gb|ABW15144.1| peptide chain release factor 2 [Frankia sp. EAN1pec] Length = 386 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 147/337 (43%), Positives = 207/337 (61%), Gaps = 4/337 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R L + DP LW + A+ + R + I ++ + Sbjct: 32 LDATLAGIATVLDVEGLRRRAQALEQEAADPDLWSDQDRAQAVTRRLSAVKGDIGRVEGL 91 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D+LI AL+ D +L E + +L + ++ + +LLSGE D DA +++ Sbjct: 92 RRRL-DDLIA---ALDLGDDDLLTEAAADLPALARDISTLEVRTLLSGEYDERDAIVQLS 147 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT +K P AYG L+ Sbjct: 148 AGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKCPYAYGTLR 207 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+ +RR TSF+ + V P V+ S ++I E + RID +R+SG GGQ Sbjct: 208 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQG 267 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 268 VNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGG 327 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++ +G QIR+YVL PYQMVKDLRT +E ++ + VL Sbjct: 328 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTNAVL 364 >gi|33864328|ref|NP_895888.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9313] gi|33641108|emb|CAE22237.1| peptide-chain-release factor RF-2 [Prochlorococcus marinus str. MIT 9313] Length = 375 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 150/334 (44%), Positives = 210/334 (62%), Gaps = 9/334 (2%) Query: 26 LNTKTED-------PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 LN + +D P W + A+ MR+ + ++ I + + D LEL Sbjct: 30 LNARQQDLEQLAAQPDFWNDQQNAQKQMRQLDEVKAQLTQITLWRSAVNDAQATLELYDL 89 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D +L E L++++ ++ + E LLSGE D A L ++AGAGGT++QDWA MLL Sbjct: 90 EPDDEMLSEAQSGLKQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLL 149 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRLVRISP+++ Sbjct: 150 RMYTRWAEDHDMTVTVDELSEGEEAGIKSATVEIEGRYAYGYLRNEKGTHRLVRISPFNA 209 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+ + + P +D +E++I E D + T R+ GAGGQ+VN ++AVRI HIPTG Sbjct: 210 NGKRQTSFAGVEIMPKIDQEVELDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTG 269 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317 + V+C QERSQ +NK +A +L+AKL + ++R EIA+I E WG QIR+YV Sbjct: 270 LAVRCTQERSQLQNKEKALALLKAKLMVIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVF 328 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PYQMVKDLRT E T V++GDLD F++ L Sbjct: 329 HPYQMVKDLRTAEETTDVQAVMNGDLDRFIQTLL 362 >gi|291299376|ref|YP_003510654.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM 44728] gi|290568596|gb|ADD41561.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM 44728] Length = 376 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 152/354 (42%), Positives = 220/354 (62%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D S L P LW + A+ + ++ + ++ I+++ Sbjct: 13 LNSTLESVTAVLDLDALSVEKSELEAAAASPDLWDDTTHAQKVTSRLSYVQSELNRIEDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L +LA E+D + ++E S L + +E + +LLSGE DS +A + + Sbjct: 73 RRRLDDAEVLWDLAQSEEDPAAVEEASKELAALSKAIEELEVRTLLSGEYDSREALISIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG +S D+A L+RMY RWAE+ + TE ++ EEAGIKSAT +K P AYG L Sbjct: 133 SGAGGADSADFAEQLMRMYLRWAERHGYPTEVYDVSYAEEAGIKSATFAVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HR+VRIS YD+ RR T+F+++ V PVV+ + +I+I + + R+D YR+SG GGQ Sbjct: 193 VEQGTHRVVRISKYDNQGRRQTAFAAVEVVPVVEQTDDIDIPDDEIRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-S 301 VNTTDSAVRITH+ TG+VV CQ ERSQ +N+A A +L+AKL L ++ EE A I E Sbjct: 253 VNTTDSAVRITHLETGIVVSCQNERSQLQNRATAMAVLKAKL--LARRREEENAKIDELR 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYV PYQMVKDLRT E + V DG++D ++A + +K Sbjct: 311 GSVQASWGEQMRSYVQHPYQMVKDLRTGWETANVMAVYDGEIDGLIEAGIRWRK 364 >gi|222637229|gb|EEE67361.1| hypothetical protein OsJ_24645 [Oryza sativa Japonica Group] Length = 498 Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 139/343 (40%), Positives = 221/343 (64%), Gaps = 7/343 (2%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL--CDNLILLE 74 D + ++ L K+ D LW + +A+ ++ + + + + +++ ++ + ++ L Sbjct: 147 DQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLLNDLKLQVEEAETIVKLT 206 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L+ D +L+E S ++ + ++ + LLSG D A + + AGAGGT++QDWA Sbjct: 207 EELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINITAGAGGTDAQDWA 266 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +MLLRMY RW EK+++KT +E GEEAGIKSAT+ ++G AYG+L GE+G HR+VR S Sbjct: 267 DMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQS 326 Query: 195 PYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 P+++ R TSF+ + V P++ ++S+++EI E D I RA G GGQ+VN ++AVR+ Sbjct: 327 PFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMV 386 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQ 311 HIPTG+ V+C +ERSQ NK +A + L+AKL + E Q+ EI I G++ K E WG+Q Sbjct: 387 HIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQ 444 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+YV PY++VKD+RT E + + V+DG+LD F++A L K Sbjct: 445 IRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 487 >gi|269218746|ref|ZP_06162600.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str. F0332] gi|269211857|gb|EEZ78197.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str. F0332] Length = 378 Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 143/341 (41%), Positives = 211/341 (61%), Gaps = 15/341 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE- 79 +R++ L + P LW + +A+ + + H + I + L D L E+A EE Sbjct: 30 ERIAELTEASAAPDLWDDQDKAQSVTSKLSHAQAELDKINAMSAALDDLETLKEMADEEA 89 Query: 80 -DDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 D E +L+R + ++ + +LLSG+ D +A + + +GAGG ++ D+A Sbjct: 90 GSDPETAAELYSDLERELGQVGADMSELEIRTLLSGKYDEREAVVTIRSGAGGVDAADFA 149 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +L RMY RWAE+R + + L+ EEAGIKS T + P AYG L E G HRLVRIS Sbjct: 150 QILQRMYLRWAERRGYSAKVLDTSYAEEAGIKSTTFEVSAPYAYGTLSVEAGTHRLVRIS 209 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D+ RR TSF+++ V P+++ + I++ E+D R+D +R+SG GGQ VNTTDSAVRITH Sbjct: 210 PFDNQGRRQTSFAAVEVIPLIEQTDHIDVPEADIRVDVFRSSGPGGQSVNTTDSAVRITH 269 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLY----ELELQKREEIANIGESSKTEIGWGR 310 IPTG+VV Q E+SQ +N+A A +L+++L E E ++++E+A ++S WG Sbjct: 270 IPTGIVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQEEEAREKKELAGDIKAS-----WGD 324 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + Sbjct: 325 QMRSYVLQPYQMVKDLRTGYEAGNPEAVFDGDIDGFIDAGI 365 >gi|115472651|ref|NP_001059924.1| Os07g0546600 [Oryza sativa Japonica Group] gi|33146529|dbj|BAC79675.1| putative translation releasing factor2 [Oryza sativa Japonica Group] gi|113611460|dbj|BAF21838.1| Os07g0546600 [Oryza sativa Japonica Group] Length = 460 Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 139/343 (40%), Positives = 221/343 (64%), Gaps = 7/343 (2%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL--CDNLILLE 74 D + ++ L K+ D LW + +A+ ++ + + + + +++ ++ + ++ L Sbjct: 109 DQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLLNDLKLQVEEAETIVKLT 168 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L+ D +L+E S ++ + ++ + LLSG D A + + AGAGGT++QDWA Sbjct: 169 EELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINITAGAGGTDAQDWA 228 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +MLLRMY RW EK+++KT +E GEEAGIKSAT+ ++G AYG+L GE+G HR+VR S Sbjct: 229 DMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQS 288 Query: 195 PYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 P+++ R TSF+ + V P++ ++S+++EI E D I RA G GGQ+VN ++AVR+ Sbjct: 289 PFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMV 348 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQ 311 HIPTG+ V+C +ERSQ NK +A + L+AKL + E Q+ EI I G++ K E WG+Q Sbjct: 349 HIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQ 406 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+YV PY++VKD+RT E + + V+DG+LD F++A L K Sbjct: 407 IRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 449 >gi|283778052|ref|YP_003368807.1| peptide chain release factor 2 [Pirellula staleyi DSM 6068] gi|283436505|gb|ADB14947.1| bacterial peptide chain release factor 2 (bRF- 2) [Pirellula staleyi DSM 6068] Length = 398 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 145/350 (41%), Positives = 220/350 (62%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ ++++ L G D+D ++ FL + P W +A ++ + + L ++ + Sbjct: 33 KIQQRVDQLRGSLDYDGKKKQFEFLEARMSQPDFWNVQEKALEVVSQVKSLKAILAPLDA 92 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D +L++A DD S + ++RI+ +++ + ++LL+G D+ A + + Sbjct: 93 IVNSASDLPGMLDMA--GDDESFAADLRAEIERIEKQLDDLELKALLNGPLDNVGAIVTI 150 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HA GGT++ DWA MLLRMY WA+K ++ + E + + AGI +ATL+I+GP AYG+L Sbjct: 151 HARDGGTDASDWAEMLLRMYIGWAQKNGYEYKVTERDEADVAGISAATLVIRGPMAYGYL 210 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G HRLVRISP++S +R TSF+++ V P + D E+ I++ D R DTYRA GAGGQ Sbjct: 211 KGESGHHRLVRISPFNSEGKRQTSFAAVDVLPEIADDFEVVINKEDIREDTYRAGGAGGQ 270 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+TH P+G+VVQCQ ERSQH N+A A+ MLRA+L E ++RE + Sbjct: 271 HVNKTESAVRLTHFPSGIVVQCQNERSQHSNRATAYKMLRARLARAEEERREAESASKYK 330 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 S ++G+G QIR+Y L P Q VKD RT + VLDG+L F+ + L Sbjct: 331 SAAKVGFGSQIRNYFLHPTQRVKDSRTGYSEGDFHSVLDGNLQGFIDSVL 380 >gi|295111639|emb|CBL28389.1| peptide chain release factor 2 [Synergistetes bacterium SGP1] Length = 224 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 128/220 (58%), Positives = 165/220 (75%), Gaps = 2/220 (0%) Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 MLLRMY R+AE+ K LE + EEAGIKSAT++++G NAYG+LK E+GVHRLVRISP Sbjct: 1 MLLRMYLRYAERDGLKATVLEATNDEEAGIKSATVMMEGDNAYGFLKAERGVHRLVRISP 60 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +DS RRHTSF+S+ V P D ++++I D ++DTYRASGAGGQ+VN TDSA+RITH+ Sbjct: 61 FDSAHRRHTSFASVLVTPEFSDDVDVDIRPEDLKVDTYRASGAGGQYVNRTDSAIRITHL 120 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRS 314 PTG+VV CQ ERSQH N+ A ++LR+KLYE LQ+R+ E+A++ K E WG QIRS Sbjct: 121 PTGIVVTCQNERSQHMNRQVAMHVLRSKLYERALQERQDELASV-VGDKKETTWGSQIRS 179 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 YVL PY +VKD RT +EK + VLDGD+DDF+ L + Sbjct: 180 YVLHPYTLVKDHRTGLEKGNAQAVLDGDIDDFIMEYLRFR 219 >gi|116515195|ref|YP_802824.1| hypothetical protein BCc_269 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116257049|gb|ABJ90731.1| peptide chain release factor RF-2 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 365 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 130/275 (47%), Positives = 192/275 (69%), Gaps = 1/275 (0%) Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D +IL+E + + IK ++ + + + + D N+ YL++ +G+GG ESQDW MLL Sbjct: 90 ENDINILKEINIQYKAIKNKIYVLESYMMFNHKNDKNNCYLDIQSGSGGLESQDWTKMLL 149 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 +MY ++ K+KF T+ + G+ GIKS TL IKG A+GWL+ E G+HRLVR SP+D+ Sbjct: 150 KMYLKYLYKKKFVTKIISETVGDNGGIKSITLSIKGKFAFGWLRTETGIHRLVRKSPFDA 209 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +RHT+FSSI+VYP + ++I+I + + RID YR+SGAGGQHVN T+SAVRITH+PTG Sbjct: 210 GKKRHTTFSSIFVYPALTNNIDINLQSKNLRIDVYRSSGAGGQHVNRTESAVRITHLPTG 269 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +V QCQ RSQHKNK A L+AKLYE+E++K++ K+ I G QIRSY+L Sbjct: 270 IVTQCQNSRSQHKNKNTAIKQLKAKLYEIEIKKKKIEKKKINKKKSNIRSGNQIRSYILD 329 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + +KD+RT +E+ ++VL+GD+ +F+K +L + Sbjct: 330 DSR-IKDMRTKLERKDINNVLNGDIHEFIKKSLKM 363 >gi|261338116|ref|ZP_05966000.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093] gi|270276738|gb|EFA22592.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093] Length = 376 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 140/326 (42%), Positives = 199/326 (61%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + +P LW + A+ + + + + + + R+ D L+EL EE D L Sbjct: 36 LEQEAAEPGLWDDPEHAQKVTSKLSAVQSQLKHLASAASRIDDVETLVELGREEADQDTL 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E ++ I ++ + ++L+ GE D A + + +GAGG ++ D+A MLLRMY RWA Sbjct: 96 DEAQSEVESITNDLRDMEIQTLMDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRWA 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ +K + ++ EEAGIKSAT + P AYG L E G HRLVRISP+D+ RR TS Sbjct: 156 ERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P+V+ + IE+ ES+ R+DTY ASG GGQ VNTT SAVRITHIPTG+VV Q Sbjct: 216 FAAVEVVPLVEATDHIEVPESEIRVDTYCASGPGGQGVNTTYSAVRITHIPTGIVVTMQD 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ +N+A A +L+++L L + E + + WG Q+RSYVL PYQMVKD Sbjct: 276 ERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT E + V DGD+D F++A + Sbjct: 335 LRTGEETSQTQAVFDGDIDAFIQAGI 360 >gi|187917953|ref|YP_001883516.1| peptide chain release factor 2 [Borrelia hermsii DAH] gi|119860801|gb|AAX16596.1| bacterial peptide chain release factor 2 [Borrelia hermsii DAH] Length = 353 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/356 (42%), Positives = 226/356 (63%), Gaps = 8/356 (2%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M ++ GG FD D +L + + + W + +A+ +++ + L I + Sbjct: 1 MNFWKKFKMSGGSFDKDKLKTQLKEYEKQINNENFWNDNKKAQEILKNQNILKAKIEPWE 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAY 118 ++ +L D L E+A E+D +L + + KL+ +YK ++ + D ++A+ Sbjct: 61 DLIFKLQDLRELCEIAESEEDTILLDKDIN-----KLKEQYKHLLTISYFKEDIDISNAF 115 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L +H+GAGGTE+ DW +ML R+Y R++E+R +KTE +++ + E GIKS T+ IKG AY Sbjct: 116 LTIHSGAGGTEACDWVSMLYRIYLRYSERRGYKTELIDLLEAE-GGIKSVTIEIKGKYAY 174 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+LK E G+HRLVRISP+D+ +RHTSF+S+++ PV+DD IEI I D R+DTYRASGA Sbjct: 175 GFLKSEIGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGA 234 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T SAVRITH+ TG+V Q Q +RSQH+NK A +L++KLYE ++ + Sbjct: 235 GGQHVNKTSSAVRITHLQTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKALEQQKSKS 294 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + K +I WG QIRSY+ QPY +VKD RT E + V+DG++D+F++ L K Sbjct: 295 KQEEKKDISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350 >gi|203284000|ref|YP_002221740.1| peptide chain release factor RF-2 [Borrelia duttonii Ly] gi|201083443|gb|ACH93034.1| peptide chain release factor RF-2 [Borrelia duttonii Ly] Length = 347 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 151/346 (43%), Positives = 218/346 (63%), Gaps = 8/346 (2%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG FD D +L + + + W + A+ +++ + L I + + +L D Sbjct: 5 GGSFDSDKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWENLICQLKDLR 64 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGT 128 L ++A EDD ++L+ + KL +YK +L + D N A+L +H+GAGGT Sbjct: 65 ELCKIAESEDDKALLERDVN-----KLREQYKHILTLSYFKEDIDINSAFLTIHSGAGGT 119 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ DW NML R Y R++E+R +K E +++ + E GIKS T+ IKG AYG+LK E G+H Sbjct: 120 EACDWVNMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSEVGIH 178 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+D+ +RHTSF+S+++ PV+DD IEI I D R+DTYRASGAGGQHVN T S Sbjct: 179 RLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGAGGQHVNKTSS 238 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+ TG+V Q Q +RSQH+NK A +L++KLYE ++ + + K +I W Sbjct: 239 AVRITHLKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKKDISW 298 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSY+ QPY +VKD RT E + V+DG++D+F++ L K Sbjct: 299 GNQIRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWK 344 >gi|224282580|ref|ZP_03645902.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB 41171] gi|310287040|ref|YP_003938298.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium bifidum S17] gi|311063912|ref|YP_003970637.1| peptide chain release factor 2 (RF-2) PrfB [Bifidobacterium bifidum PRL2010] gi|313139738|ref|ZP_07801931.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB 41171] gi|309250976|gb|ADO52724.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium bifidum S17] gi|310866231|gb|ADP35600.1| PrfB Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium bifidum PRL2010] gi|313132248|gb|EFR49865.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB 41171] Length = 375 Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 142/338 (42%), Positives = 202/338 (59%), Gaps = 1/338 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D + +++ L T+ P LW + A+ + + + E R+ D L+ Sbjct: 24 LDIERLKSQIATLETEAAKPGLWDDPENAQKVTSRLSAAQAQLKRLNEANRRIEDVETLV 83 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA EE D L E + I E++ + ++LL GE D A + + +GAGG ++ D+ Sbjct: 84 ELAQEEADADSLSEAQSEIGSIAQELDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L E G HRLVRI Sbjct: 144 AQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRI 203 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ VNTT SAVRIT Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRIT 263 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+PTG+VV Q ERSQ +N+A A +L+++L L + E + + WG Q+R Sbjct: 264 HLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL PYQMVKDLRT E + V DGD+D F++A + Sbjct: 323 SYVLHPYQMVKDLRTGCETSQTQAVFDGDIDAFIEAGI 360 >gi|226531101|ref|NP_001152654.1| peptide chain release factor 2 [Zea mays] gi|195658609|gb|ACG48772.1| peptide chain release factor 2 [Zea mays] gi|223950205|gb|ACN29186.1| unknown [Zea mays] Length = 449 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 137/337 (40%), Positives = 217/337 (64%), Gaps = 7/337 (2%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL--CDNLILLELALEED 80 ++ L K+ D LW + +A+ ++ + + + + + + ++ + ++ L L+ Sbjct: 108 IASLENKSSDSSLWDDPSKAQGILVSLTEVKDKVKLLNDFKLQIEEAETIVKLTEELDSI 167 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D +L+E S ++ + ++ + LLSG D A + + AGAGGT++QDWA+MLLRM Sbjct: 168 DTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINISAGAGGTDAQDWADMLLRM 227 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RW EK+++KT +E GEEAGIKSAT+ ++G AYG+L GE+G HR+VR SP+++ Sbjct: 228 YVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKG 287 Query: 201 RRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R TSF+ + V P++ ++S+ ++I E D I RA G GGQ+VN ++AVR+ HIPTG+ Sbjct: 288 LRQTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGI 347 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRSYVL 317 V+C +ERSQ NK +A + L+AKL + L++R EI I G+ K E WG+QIR+YV Sbjct: 348 AVRCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAE--WGQQIRNYVF 405 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY++VKD+RT E + + V+DG+LD F++A L K Sbjct: 406 HPYKLVKDVRTGCETSDITGVMDGELDPFIRAYLKYK 442 >gi|257791746|ref|YP_003182352.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243] gi|317487783|ref|ZP_07946376.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA] gi|325831767|ref|ZP_08164956.1| peptide chain release factor 2 [Eggerthella sp. HGA1] gi|257475643|gb|ACV55963.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243] gi|316913058|gb|EFV34574.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA] gi|325486436|gb|EGC88886.1| peptide chain release factor 2 [Eggerthella sp. HGA1] Length = 364 Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 149/346 (43%), Positives = 213/346 (61%), Gaps = 2/346 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+++++ G D L+ L+ + P W + A+ + ++ L + I+ E Sbjct: 11 KVAQRVEAAHGYLHIDERAAELAKLDEEIAQPGFWDDASHAQSVSKQASVLRDTIAEYDE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 L D +LA E D +E S L ++ ++ + S S D DA L V Sbjct: 71 AAALLDDARAAFDLASE--DELFAEEASAALDKLDELLDALEISSWFSERFDGGDAILTV 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + G+GG E+QDW +ML RMY R+AEK+ +K L++ GE G+ AT+ I+G NA+G L Sbjct: 129 NPGSGGLEAQDWTDMLYRMYVRYAEKKDWKVTVLDVVPGEGIGLDKATIQIEGRNAFGML 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP D RRHT+F+ + V PV+ D IE++++ +D R+D YR+SG GGQ Sbjct: 189 KSESGVHRLVRISPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPT +VV CQ E+SQ +NK A+ +L+AKLYE E QKR+E Sbjct: 249 CVNTTDSAVRLTHIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRQEELAELRG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + +G QIR+YVL PYQMVKD+R+ IE + VLDG+LD+F+ Sbjct: 309 DRMDNTFGSQIRNYVLYPYQMVKDVRSGIETGNVDAVLDGELDEFV 354 >gi|189347853|ref|YP_001944382.1| peptide chain release factor 2 [Chlorobium limicola DSM 245] gi|189342000|gb|ACD91403.1| peptide chain release factor 2 [Chlorobium limicola DSM 245] Length = 249 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 128/246 (52%), Positives = 175/246 (71%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 +LSG+ D +A + +HAGAGGTE+QDWA +L RMY RWAE++ FK + +G+ AGIK Sbjct: 1 MLSGKDDPGNAIITIHAGAGGTEAQDWAEILYRMYMRWAERKGFKVYTDDYQEGDGAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +ATL I+G AYG+LK E GVHRLVR+SP+DSN+RRHTSF+S++ YP +EI++ + Sbjct: 61 TATLEIQGQYAYGYLKAENGVHRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKE 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D + T+R+ G GGQ+VN ++AVRI HIP+G+VV CQQERSQ +N+ +A ML A+LY+ Sbjct: 121 DLELSTFRSGGKGGQNVNKVETAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQ 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + ++ E E K +I WG QIRSYVL + +KD RTN E+ VLDGDLD F Sbjct: 181 RQREEEEAKKREIEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNYERFDIETVLDGDLDAF 239 Query: 347 MKATLA 352 M+ L+ Sbjct: 240 MEKYLS 245 >gi|124024426|ref|YP_001018733.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9303] gi|123964712|gb|ABM79468.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9303] Length = 319 Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 145/307 (47%), Positives = 201/307 (65%), Gaps = 2/307 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MR+ + + IK + + D LEL E D +L E LQ+++ ++ + E Sbjct: 1 MRQLDEVKAQLVQIKLWRSAVNDAQATLELYDLEPDDEMLSEAQSGLQQLRQGLDRWELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGE D A L ++AGAGGT++QDWA MLLRMYTRWAE + E+ +GEEAGI Sbjct: 61 RLLSGEYDKKGAVLSINAGAGGTDAQDWAQMLLRMYTRWAEDHDMRVTVDELSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I+G AYG+L+ E+G HRLVRISP+++N +R TSF+ + + P +D +E++I E Sbjct: 121 KSATVEIEGRYAYGYLRNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQEVELDIPE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D + T R+ GAGGQ+VN ++AVRI HIPTG+ V+C QERSQ +NK +A +L+AKL Sbjct: 181 KDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKAKLM 240 Query: 286 ELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + ++R EIA+I E WG QIR+YV PYQMVKDLRT E T V++G+LD Sbjct: 241 VIAQEQRAAEIADI-RGDIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGELD 299 Query: 345 DFMKATL 351 F++ L Sbjct: 300 RFIQTLL 306 >gi|94984277|ref|YP_603641.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300] gi|94554558|gb|ABF44472.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300] Length = 380 Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 143/326 (43%), Positives = 207/326 (63%), Gaps = 6/326 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G FD +RL+ L+ + DP LW N A+ + +E L + + +Q Sbjct: 28 GSTFDIPGKTRRLNELDRELSDPELWNNPSRARQVTQEAGSLRRIVDGYRTLQSDANSLN 87 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LE+A +E+ ++L E D +Q +++ Y+ E+L + + A + V GAGGTE+ Sbjct: 88 EMLEMASDEER-ALLAEEQDTIQ-ARVDELYR--ETLFTMKHADAPAIVRVKGGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML RMY RWAE+R +K + L+ GE+AG +S +I+G A+G + E GVHRL Sbjct: 144 QDWAGMLARMYMRWAERRGYKVDVLDEQPGEQAGYQSIEFIIRGEKAFGMMAPEHGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VR+SP+D+N+RR TSF+S+ V P V ++ I+I I +SD R+D YR+ GAGGQ VNTTDSA Sbjct: 204 VRVSPFDANNRRQTSFASVDVVPEVPEEQIDIVIPDSDVRVDVYRSQGAGGQGVNTTDSA 263 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG++V Q RSQ KN+ A+ +L+ +LY+LE++KREE + +I WG Sbjct: 264 VRVTHLPTGIIVAIQVTRSQIKNREMAFQILKQRLYDLEMRKREEEEAKARGEQKKIEWG 323 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSP 335 QIRSYVL Q VKD RT + K +P Sbjct: 324 SQIRSYVLD-KQYVKDHRTGLMKHNP 348 >gi|262340849|ref|YP_003283704.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272186|gb|ACY40094.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 365 Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 136/324 (41%), Positives = 217/324 (66%), Gaps = 3/324 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P+ W++ ++K +R + +I ++++ L + I+ + EE+ L+ Sbjct: 39 NPNFWKDYKKSKDSIRSLHEMKTSIKDFMKLKNALEELEIIFSFSKEENLEKELEIQFHK 98 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ +E+K +LLS + DS +A L++ +GAGGTES DW +ML+RMY WAEK F Sbjct: 99 TMKLLSNIEFK---NLLSEKEDSLNAILQISSGAGGTESCDWTSMLMRMYFMWAEKHNFS 155 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + + G+ GIKS TL I G A+G+LKGE GVHRL+RISP+DSNS+RHTSFSS++V Sbjct: 156 VKKINFISGDITGIKSVTLEIDGIYAFGYLKGENGVHRLIRISPFDSNSKRHTSFSSVYV 215 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP+++D+I+I+I SD + +T+R+SGAGGQ+VN ++ VR+ H PTG+ ++ + RSQ + Sbjct: 216 YPMINDNIDIDIKTSDIQWETFRSSGAGGQNVNKVETGVRLRHHPTGITIENTESRSQMQ 275 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A +L+++L+E+E+ K+ E +S K +I WG QIR+Y++ PY++VKDLRT + Sbjct: 276 NRQKALLLLKSRLFEIEMIKKNEKKEKIKSEKKKIEWGSQIRNYIMHPYKLVKDLRTGYQ 335 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 T V+DG++D F+K L KK Sbjct: 336 TTQIQSVMDGEIDTFLKKFLMYKK 359 >gi|123967735|ref|YP_001008593.1| peptide chain release factor 2 [Prochlorococcus marinus str. AS9601] gi|123197845|gb|ABM69486.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. AS9601] Length = 354 Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W N EAK M + + + + + + D LEL E + ++ E+ L Sbjct: 25 PEFWDNQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSLEPEEEMILESQLGL 84 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++++ ++ +FE LL GE D A + ++AGAGGT++QDW +LLRMY+RWA+ + Sbjct: 85 KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEILLRMYSRWADNNQMSL 144 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E+ GEEAGIKS T I+G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V Sbjct: 145 VINELSQGEEAGIKSVTFEIEGKYAYGYLQHEKGTHRLVRISPFNANGKRQTSFAGVEVM 204 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD+I ++I E D I T R+ GAGGQ+VN ++AVRI H+P+G+ V+C QERSQ +N Sbjct: 205 PKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGISVRCTQERSQLQN 264 Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +A +L++KL + ++R E+A+I + E WG QIR+YV PYQMVKDLRT E Sbjct: 265 KEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNYVFHPYQMVKDLRTMQE 323 Query: 332 KTSPSDVLDGDLDDFMKATL 351 VLDG LD F+ L Sbjct: 324 TNELDSVLDGGLDPFIHELL 343 >gi|126695538|ref|YP_001090424.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9301] gi|126542581|gb|ABO16823.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9301] Length = 354 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 138/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W+N EAK M + + + + + + D LEL E + ++ E+ L Sbjct: 25 PEFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSLEPEEEMILESKQGL 84 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++++ ++ +FE LL GE D A + ++AGAGGT++QDW +LLRMY+RWA+ + Sbjct: 85 KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEILLRMYSRWADNNQMSL 144 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E+ GEEAGIKS T I G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V Sbjct: 145 IINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHRLVRISPFNANGKRQTSFAGVEVM 204 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD+I ++I E D I T R+ GAGGQ+VN ++AVRI H+P+G+ V+C QERSQ +N Sbjct: 205 PKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGISVRCTQERSQLQN 264 Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +A +L++KL + ++R E+A+I + E WG QIR+YV PYQMVKDLRT E Sbjct: 265 KEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNYVFHPYQMVKDLRTMQE 323 Query: 332 KTSPSDVLDGDLDDFMKATL 351 VLDG L+ F+ L Sbjct: 324 TNELDSVLDGGLEPFIHELL 343 >gi|157412537|ref|YP_001483403.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9215] gi|157387112|gb|ABV49817.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9215] Length = 354 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 138/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W+N EAK M + + + + + + D LEL E + ++ E+ L Sbjct: 25 PAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSLEPEEEMILESKQGL 84 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++++ ++ +FE LL GE D A + ++AGAGGT++QDW +LLRMY+RWA+ + Sbjct: 85 KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEILLRMYSRWADNNQMSL 144 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E+ GEEAGIKS T I G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V Sbjct: 145 VINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHRLVRISPFNANGKRQTSFAGVEVM 204 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD+I ++I E D I T R+ GAGGQ+VN ++AVRI H+P+G+ V+C QERSQ +N Sbjct: 205 PKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGISVRCTQERSQLQN 264 Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +A +L++KL + ++R E+A+I + E WG QIR+YV PYQMVKDLRT E Sbjct: 265 KEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNYVFHPYQMVKDLRTMQE 323 Query: 332 KTSPSDVLDGDLDDFMKATL 351 VLDG L+ F+ L Sbjct: 324 TNDLDSVLDGGLEPFIHELL 343 >gi|254526132|ref|ZP_05138184.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9202] gi|221537556|gb|EEE40009.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9202] Length = 354 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 138/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W+N EAK M + + + + + + D LEL E + ++ E+ L Sbjct: 25 PAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSLEPEEEMILESKQGL 84 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++++ ++ +FE LL GE D A + ++AGAGGT++QDW +LLRMY+RWA+ + Sbjct: 85 KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTDAQDWVEILLRMYSRWADNNQMTL 144 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E+ GEEAGIKS T I G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V Sbjct: 145 VINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHRLVRISPFNANGKRQTSFAGVEVM 204 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD+I ++I E D I T R+ GAGGQ+VN ++AVRI H+P+G+ V+C QERSQ +N Sbjct: 205 PKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGISVRCTQERSQLQN 264 Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +A +L++KL + ++R E+A+I + E WG QIR+YV PYQMVKDLRT E Sbjct: 265 KEKAMLLLKSKLLVIAKEQRAAEVADI-KGDIVEAAWGNQIRNYVFHPYQMVKDLRTMQE 323 Query: 332 KTSPSDVLDGDLDDFMKATL 351 VLDG L+ F+ L Sbjct: 324 TNDLDSVLDGGLEPFIHELL 343 >gi|291456213|ref|ZP_06595603.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213] gi|291381490|gb|EFE89008.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213] Length = 374 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 138/344 (40%), Positives = 205/344 (59%), Gaps = 1/344 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + + D D + L + P LW N A+ + + ++ + + R+ Sbjct: 18 DSIAKALDVDRLKADIKDLEAQAAAPGLWDNPDNAQKITSKLSAAESQLKRLTSASQRID 77 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L+EL EE D L E + + I+ +++ + ++LL GE D A + + +GAGG Sbjct: 78 DVETLVELGQEEQDQESLDEAQNEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGG 137 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L E G Sbjct: 138 VDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGT 197 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D+ RR TSF+++ V P+V+ + ++I ++D R+DTY +SG GGQ VNTT Sbjct: 198 HRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHVDIPDTDIRVDTYCSSGPGGQGVNTTY 257 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L + E + + Sbjct: 258 SAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKAS 316 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG Q+RSYVL PYQMVKDLRT E + V DGD+++F++A + Sbjct: 317 WGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINNFIEAGI 360 >gi|300741817|ref|ZP_07071838.1| peptide chain release factor 2 [Rothia dentocariosa M567] gi|300381002|gb|EFJ77564.1| peptide chain release factor 2 [Rothia dentocariosa M567] Length = 375 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 139/327 (42%), Positives = 209/327 (63%), Gaps = 6/327 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83 L+ + P LW + A+ + H ++ + + R+ D +++ELA ED+ S Sbjct: 36 LSQQASAPELWDDPEHAQRVTSALSHKQAELNRLTNLASRIDDVEVMVELAQTEDESSKE 95 Query: 84 -ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +L E + ++ +++ + LLSGE D +A + + +GAGG ++ D+A MLLRMY Sbjct: 96 DLLAEAEAECKELRKKLDELEVLVLLSGEYDQREAVVTIRSGAGGVDAADFAEMLLRMYL 155 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAEK + T+ L+ EEAG+KS T + P A+G L E G HRLVRISP+D+ RR Sbjct: 156 RWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLVRISPFDNQGRR 215 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TSF+++ V P+++ + +EI ES+ ++D +R+SG GGQ VNTTDSAVR+THIPTG+VV Sbjct: 216 QTSFAAVEVIPLIEQTDALEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMTHIPTGIVVS 275 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQ 321 Q E+SQ +N+A A +L+++L L L++ +E A E + + WG Q+RSYVL PYQ Sbjct: 276 MQNEKSQIQNRAAALRVLQSRL--LMLRQEQEDAKKKELAGDIKASWGDQMRSYVLHPYQ 333 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMK 348 MVKDLRT E+ + S VLDG L+ F++ Sbjct: 334 MVKDLRTGYEEGNTSSVLDGGLNRFIE 360 >gi|311111708|ref|YP_003982930.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931] gi|310943202|gb|ADP39496.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931] Length = 375 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 139/327 (42%), Positives = 209/327 (63%), Gaps = 6/327 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83 L+ + P LW + A+ + H ++ + + R+ D +++ELA ED+ S Sbjct: 36 LSQQASAPELWDDPEHAQRVTSALSHKQAELNRLTNLASRIDDVEVMVELAQTEDESSAE 95 Query: 84 -ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +L E + ++ +++ + LLSGE D +A + + +GAGG ++ D+A MLLRMY Sbjct: 96 DLLAEAEAECKELRKKLDELEVLVLLSGEYDQREAVVTIRSGAGGVDAADFAEMLLRMYL 155 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAEK + T+ L+ EEAG+KS T + P A+G L E G HRLVRISP+D+ RR Sbjct: 156 RWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLVRISPFDNQGRR 215 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TSF+++ V P+++ + +EI ES+ ++D +R+SG GGQ VNTTDSAVR+THIPTG+VV Sbjct: 216 QTSFAAVEVIPLIEQTDALEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMTHIPTGIVVS 275 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQ 321 Q E+SQ +N+A A +L+++L L L++ +E A E + + WG Q+RSYVL PYQ Sbjct: 276 MQNEKSQIQNRAAALRVLQSRL--LMLRQEQEDAKKKELAGDIKASWGDQMRSYVLHPYQ 333 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMK 348 MVKDLRT E+ + S VLDG L+ F++ Sbjct: 334 MVKDLRTGYEEGNTSSVLDGGLNRFIE 360 >gi|320449740|ref|YP_004201836.1| peptide chain release factor 2, programmed [Thermus scotoductus SA-01] gi|320149909|gb|ADW21287.1| peptide chain release factor 2, programmed [Thermus scotoductus SA-01] Length = 307 Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 136/256 (53%), Positives = 173/256 (67%), Gaps = 3/256 (1%) Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 KLE Y E+LLS +A L + GAGGTE+ DWA MLLRMYTR+AE++ F+ E + Sbjct: 39 KLESLYH--ETLLSFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVV 96 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 ++ G EAGI A ++++G NAYG L E GVHRLVR SP+D++ RRHTSF+ + V P V Sbjct: 97 DVTPGAEAGIDYAQIIVRGENAYGLLAPEAGVHRLVRPSPFDASGRRHTSFAGVEVMPEV 156 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD++E+ I D RID +R+ G GGQ VNTTDSAVRI H+PTG+ V CQ RSQ KNK Sbjct: 157 DDTVEVVIRPEDLRIDVFRSQGHGGQGVNTTDSAVRIVHLPTGITVTCQTTRSQIKNKEL 216 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A +LR++LYELE +K++E I WG QIRSYVL Q VKD RT + + P Sbjct: 217 AMKVLRSRLYELEWKKKQEELRKLRGEVRPIEWGSQIRSYVLD-KQYVKDHRTGLMRFDP 275 Query: 336 SDVLDGDLDDFMKATL 351 +VLDGDL DF+ A L Sbjct: 276 QNVLDGDLLDFIWAGL 291 >gi|322688633|ref|YP_004208367.1| peptide chain release factor [Bifidobacterium longum subsp. infantis 157F] gi|320459969|dbj|BAJ70589.1| peptide chain release factor [Bifidobacterium longum subsp. infantis 157F] Length = 374 Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T+ P LW + A+ + ++ + + R+ D L+EL EE D L Sbjct: 36 LETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVELGREEGDQDSL 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + I+ +++ + ++LL GE D A + + +GAGG ++ D+A MLLRMY R+ Sbjct: 96 DEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYC 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ FK + ++ EEAGIKSAT + P AYG L E G HRLVRISP+D+ RR TS Sbjct: 156 ERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P+V+ + I+I ++D R+DTY +SG GGQ VNTT SAVRITH+PTG+VV Q Sbjct: 216 FAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQD 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ +N+A A +L+++L L + E + + WG Q+RSYVL PYQMVKD Sbjct: 276 ERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT E + V DGD++ F++A + Sbjct: 335 LRTGYETSQTQAVFDGDINAFIEAGI 360 >gi|213692886|ref|YP_002323472.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524347|gb|ACJ53094.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459060|dbj|BAJ69681.1| peptide chain release factor [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 374 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T+ P LW + A+ + ++ + + R+ D L+EL EE D L Sbjct: 36 LETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVELGHEEGDQDSL 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + I+ +++ + ++LL GE D A + + +GAGG ++ D+A MLLRMY R+ Sbjct: 96 DEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYC 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ FK + ++ EEAGIKSAT + P AYG L E G HRLVRISP+D+ RR TS Sbjct: 156 ERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P+V+ + I+I ++D R+DTY +SG GGQ VNTT SAVRITH+PTG+VV Q Sbjct: 216 FAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQD 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ +N+A A +L+++L L + E + + WG Q+RSYVL PYQMVKD Sbjct: 276 ERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT E + V DGD++ F++A + Sbjct: 335 LRTGYETSQTQAVFDGDINAFIEAGI 360 >gi|23465750|ref|NP_696353.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705] gi|189439805|ref|YP_001954886.1| peptide chain release factor 2 [Bifidobacterium longum DJO10A] gi|239622364|ref|ZP_04665395.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296453666|ref|YP_003660809.1| peptide chain release factor 2 [Bifidobacterium longum subsp. longum JDM301] gi|312133211|ref|YP_004000550.1| prfb [Bifidobacterium longum subsp. longum BBMN68] gi|322690619|ref|YP_004220189.1| peptide chain release factor [Bifidobacterium longum subsp. longum JCM 1217] gi|23326435|gb|AAN24989.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705] gi|189428240|gb|ACD98388.1| Protein chain release factor B [Bifidobacterium longum DJO10A] gi|239514361|gb|EEQ54228.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291517272|emb|CBK70888.1| bacterial peptide chain release factor 2 (bRF-2) [Bifidobacterium longum subsp. longum F8] gi|296183097|gb|ADG99978.1| peptide chain release factor 2 [Bifidobacterium longum subsp. longum JDM301] gi|311772412|gb|ADQ01900.1| PrfB [Bifidobacterium longum subsp. longum BBMN68] gi|320455475|dbj|BAJ66097.1| peptide chain release factor [Bifidobacterium longum subsp. longum JCM 1217] Length = 374 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T+ P LW + A+ + ++ + + R+ D L+EL EE D L Sbjct: 36 LETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVELGHEEGDQDSL 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + I+ +++ + ++LL GE D A + + +GAGG ++ D+A MLLRMY R+ Sbjct: 96 DEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYC 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ FK + ++ EEAGIKSAT + P AYG L E G HRLVRISP+D+ RR TS Sbjct: 156 ERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P+V+ + I+I ++D R+DTY +SG GGQ VNTT SAVRITH+PTG+VV Q Sbjct: 216 FAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQD 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ +N+A A +L+++L L + E + + WG Q+RSYVL PYQMVKD Sbjct: 276 ERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT E + V DGD++ F++A + Sbjct: 335 LRTGYETSQTQAVFDGDINAFIEAGI 360 >gi|213162329|ref|ZP_03348039.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 194 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 129/193 (66%), Positives = 154/193 (79%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G Sbjct: 2 DCYLDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRA Sbjct: 62 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRA 121 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ Sbjct: 122 SGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 181 Query: 296 ANIGESSKTEIGW 308 E +K++IGW Sbjct: 182 KQAMEDTKSDIGW 194 >gi|227546362|ref|ZP_03976411.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|317482557|ref|ZP_07941572.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA] gi|227213343|gb|EEI81215.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|316915979|gb|EFV37386.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA] Length = 374 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 1/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T+ P LW + A+ + ++ + + R+ D L+EL EE D L Sbjct: 36 LETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVELGHEEGDQDSL 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + I+ +++ + ++LL GE D A + + +GAGG ++ D+A MLLRMY R+ Sbjct: 96 DEAQGEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYC 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ FK + ++ EEAGIKSAT + P AYG L E G HRLVRISP+D+ RR TS Sbjct: 156 ERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P+V+ + I+I ++D R+DTY +SG GGQ VNTT SAVRITH+PTG+VV Q Sbjct: 216 FAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQD 275 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ +N+A A +L+++L L + E + + WG Q+RSYVL PYQMVKD Sbjct: 276 ERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKD 334 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 LRT E + V DGD++ F++A + Sbjct: 335 LRTGYETSQTQAVFDGDINAFIEAGI 360 >gi|78778568|ref|YP_396680.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9312] gi|78712067|gb|ABB49244.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus marinus str. MIT 9312] Length = 354 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 138/320 (43%), Positives = 199/320 (62%), Gaps = 2/320 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W+N AK M + + + + + + D LEL E + ++ E+ L Sbjct: 25 PEFWENQEAAKKQMLILDDVKAQLELLDKWKTFISDANASLELYSLEPEEEMILESQQGL 84 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++++ ++ +FE LL GE D A + + AGAGGT++QDW +LLRMY+RWA+ + Sbjct: 85 KKLRDNLDKWEFERLLCGEYDKEGAVVSIKAGAGGTDAQDWVEILLRMYSRWADNNQMSL 144 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E+ GEEAGIKS T I G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V Sbjct: 145 IINELSQGEEAGIKSVTFEIDGKYAYGYLQYEKGTHRLVRISPFNANGKRQTSFAGVEVM 204 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD+I ++I E D I T R+ GAGGQ+VN ++AVRI H+P+G+ V+C QERSQ +N Sbjct: 205 PKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGISVRCTQERSQLQN 264 Query: 273 KAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +A +L++KL + ++R EIA+I + E WG QIR+YV PYQMVKDLRT E Sbjct: 265 KEKAMLLLKSKLLVIAKEQRAAEIADI-KGDIVEAAWGNQIRNYVFHPYQMVKDLRTMQE 323 Query: 332 KTSPSDVLDGDLDDFMKATL 351 VLDG L+ F+ L Sbjct: 324 TNELDSVLDGGLEPFIHELL 343 >gi|226324356|ref|ZP_03799874.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758] gi|225206804|gb|EEG89158.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758] Length = 313 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 149/306 (48%), Positives = 211/306 (68%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + + + + +++++ D L+EL EE+D +++E + + + E E + Sbjct: 1 MKELRKMQDCVKEVRDLESSYEDINALIELTEEEEDREMIKEIQREIAKFEKEFEDLRIR 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE DS +A + +HAGAGGT+S DWANML RMYTR+A+ + F+ L+ DG+ G+ Sbjct: 61 TLLSGEYDSCNAIVTLHAGAGGTDSCDWANMLYRMYTRYAQSKGFQITVLDYQDGDITGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K T + G NAYG+ + E+GVHRLVRISP++S +R TSF+S V P ++D I+IE+++ Sbjct: 121 KGITFEVTGDNAYGYFQSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEDDIDIELND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQ NK +A ML+AKLY Sbjct: 181 DDLRIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQLFNKDKAMQMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++EE + +I +G QIRSY+L PY +VKD RT E + S VLDG+LD Sbjct: 241 LLKKQEQEEKVSGIRGEVQDINFGSQIRSYILHPYNLVKDHRTGEETGNVSAVLDGELDP 300 Query: 346 FMKATL 351 F+ A L Sbjct: 301 FINAYL 306 >gi|291442144|ref|ZP_06581534.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] gi|291345039|gb|EFE71995.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] Length = 375 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 143/351 (40%), Positives = 208/351 (59%), Gaps = 6/351 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S ++I ESD R+D YR+SG + Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSC-N 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +D VRITH+PTG++ ERS+ +NK A N+L+A+L L +++EE A + ++ Sbjct: 252 PRDSDFMVRITHLPTGIMASSDSERSRTRNKVTAMNVLKARL--LGRRRQEEQAKM-DAL 308 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K E G G Q+RSY L PYQMVKDLRT E +P V +G++D F++A + Sbjct: 309 KDEGGNPCGNQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGI 359 >gi|78044242|ref|YP_359035.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans Z-2901] gi|77996357|gb|ABB15256.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans Z-2901] Length = 371 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 155/329 (47%), Positives = 218/329 (66%), Gaps = 1/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L KT +P W N EA+ ++E L + I +E+ + +LL+L EE++ + Sbjct: 35 LTAKTYEPDFWDNYTEAQKTLKELNRLKDDIEKYEELLKAQEELTVLLQLLEEEENEELA 94 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E D +++ ++ + E LLSG D N A + +HAGAGGTE+QDW ML RMYTRWA Sbjct: 95 VEAQDKAKKLMEKLHRMEIELLLSGPYDKNSAIVSLHAGAGGTEAQDWVEMLYRMYTRWA 154 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + +K E ++ GEEAG+KS T ++G AYG+LK E+GVHRL+RISP+D + RRHTS Sbjct: 155 EDKGYKVELIDRLLGEEAGLKSVTFSVEGFGAYGYLKAERGVHRLIRISPFDFSGRRHTS 214 Query: 206 FSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 F+S+ V P V +D EIE+ E + +I+T+R+ GAGGQHVN T+SAVRITH+PTG+ V CQ Sbjct: 215 FASVDVLPEVAEDIPEIELKEEELKIETFRSGGAGGQHVNKTESAVRITHLPTGITVVCQ 274 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ N+A A +L+AKL +LE++K+EE + EI WG QIR+YV PY +VK Sbjct: 275 NERSQLMNRALAEKLLKAKLLDLEMKKKEEEMAKLRGEQKEIAWGSQIRTYVFHPYSLVK 334 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 D RT +E V+DG++D F++A L + Sbjct: 335 DHRTGVEVGDVQGVMDGEIDIFIEAYLKM 363 >gi|226354826|ref|YP_002784566.1| peptide chain release factor 2 [Deinococcus deserti VCD115] gi|226316816|gb|ACO44812.1| putative Peptide chain release factor 2 (RF-2) [Deinococcus deserti VCD115] Length = 383 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 146/342 (42%), Positives = 205/342 (59%), Gaps = 6/342 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G FD +RL+ L+ + DP LW + A+ + +E + I E L + Sbjct: 31 GSTFDIPGKTRRLNELDRELSDPELWNDQSRARQVTQE----SGTLRRIVESYSSLHSDA 86 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L LE D + + ++ V+ E+L + + A + V GAGGTE+ Sbjct: 87 QGLNEMLEIADEEEREMLVEEQSSLQTRVDELYRETLFTMKHADTAAIVRVKGGAGGTEA 146 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML RMY RWAE+R +K + L+ G++AG +S +I+G AYG + E GVHRL Sbjct: 147 QDWAGMLARMYMRWAERRGYKVDILDEQPGDQAGYQSIEFIIRGEKAYGMMAAEHGVHRL 206 Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VR+SP+DSN+RR TSF+S+ V P V ++ I I I +SD R D +R+ GAGGQ VNTTDSA Sbjct: 207 VRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGVNTTDSA 266 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG+ V CQ RSQ KN A +L+ +LY++E++KRE ++ ++ WG Sbjct: 267 VRLTHLPTGIAVACQITRSQIKNAELALQILKQRLYDIEVKKREAEEAAARGAQAKVEWG 326 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Q+RSYVL Q +KD RT + K +P DVLDGDLD+ M A L Sbjct: 327 SQMRSYVLDK-QYIKDHRTGLMKHNPDDVLDGDLDELMWAGL 367 >gi|304389757|ref|ZP_07371716.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326933|gb|EFL94172.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 376 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 137/361 (37%), Positives = 217/361 (60%), Gaps = 12/361 (3%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + D + Q+++ L + P LW + A+ + + + +++ Sbjct: 13 KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQK 72 Query: 62 IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ R+ D L+EL EE D +IL + + +K +++ + ++LL+GE D A Sbjct: 73 MRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY R+ E+ + T+ L+ EEAGIKS T + P AY Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRL R+SP+++ +R TSF+++ V P+++ + IE+ ESD +ID +R+SG Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ----KREE 294 GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L L Q K++E Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +A ++S WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ A + + Sbjct: 313 LAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367 Query: 355 K 355 K Sbjct: 368 K 368 >gi|206895563|ref|YP_002247293.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM 5265] gi|206738180|gb|ACI17258.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM 5265] Length = 370 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 133/331 (40%), Positives = 205/331 (61%), Gaps = 1/331 (0%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ LS + E P +W + +A + R+ Q L+ I +++I++ L D LEL Sbjct: 27 DDKKAELSDVRKVYEKPDIWSDPDKAVAVARKVQRLEEEIERVEQIENLLKDLDAALELL 86 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E D + + L+ ++ +E + +L + D+NDA L +HAGAGG ++ DW M Sbjct: 87 QEGYDEELFEHALATLKELQQRIELFRLVTLFTEPYDTNDAILMLHAGAGGVDAMDWTQM 146 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L+RMY RWAE+ F+TE ++I GEEAG+KS T+ ++G AYG+L+ E+GVHRLVR+SP+ Sbjct: 147 LMRMYLRWAERMGFETEIVDISRGEEAGVKSCTVFVRGSYAYGYLRAEKGVHRLVRLSPF 206 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 D++ RRHTSF ++ + +E+EI+ D ++T+R+ GAGGQH N T+S VR+ H P Sbjct: 207 DADHRRHTSF-ALVDVVPDVEDVEVEINPDDIEVETFRSGGAGGQHQNKTESGVRLIHKP 265 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TG+ V +ERSQ +N+ +A +LRA++++ ++R++ WG QIRSYV Sbjct: 266 TGITVTVTEERSQLQNRERAMRILRARVHQYHEEERKKSLEEIRGDVKSASWGNQIRSYV 325 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 PY MVKD RT + +V+DGD+ DFM Sbjct: 326 FHPYNMVKDHRTGYSRGDIDNVMDGDITDFM 356 >gi|315657060|ref|ZP_07909945.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492452|gb|EFU82058.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 376 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 137/361 (37%), Positives = 217/361 (60%), Gaps = 12/361 (3%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + D + Q+++ L + P LW + A+ + + + +++ Sbjct: 13 KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADMQRLQK 72 Query: 62 IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ R+ D L+EL EE D +IL + + +K +++ + ++LL+GE D A Sbjct: 73 MRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY R+ E+ + T+ L+ EEAGIKS T + P AY Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRL R+SP+++ +R TSF+++ V P+++ + IE+ ESD +ID +R+SG Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ----KREE 294 GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L L Q K++E Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +A ++S WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ A + + Sbjct: 313 LAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367 Query: 355 K 355 K Sbjct: 368 K 368 >gi|315655086|ref|ZP_07907988.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333] gi|315490567|gb|EFU80190.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333] Length = 376 Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 137/361 (37%), Positives = 217/361 (60%), Gaps = 12/361 (3%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + D + Q+++ L + P LW + A+ + + + +++ Sbjct: 13 KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQVDMQRLQK 72 Query: 62 IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ R+ D L+EL EE D +IL + + +K +++ + ++LL+GE D A Sbjct: 73 MRARIDDMEALVELGAEEAGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY R+ E+ + T+ L+ EEAGIKS T + P AY Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRL R+SP+++ +R TSF+++ V P+++ + IE+ ESD +ID +R+SG Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ----KREE 294 GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L L Q K++E Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +A ++S WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ A + + Sbjct: 313 LAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367 Query: 355 K 355 K Sbjct: 368 K 368 >gi|50954999|ref|YP_062287.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951481|gb|AAT89182.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 372 Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 138/350 (39%), Positives = 209/350 (59%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D ++ L+ + P LW + + A+ + H + ++ I Sbjct: 12 ELRSTLADITAVVDVDKLRAAIADLSERAGAPDLWDDPVNAQKVTSALSHRQSELARITA 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 IQ RL D +L+ELA E DD E L+ ++ + + ++LLSGE D A + + Sbjct: 72 IQQRLDDLEVLVELANEGDDEESAAEARAELEALQKALGDLEVQTLLSGEYDERAAIVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ K+ ++ E AGIKSAT + P A+G L Sbjct: 132 RSGAGGDDATDFAEMLLRMYLRWAEQHKYPVTVMDTSYAEGAGIKSATFEVDMPYAFGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRL RISP+ S +R TSF+++ V P+++++ ++++ E D R+D +R+SG GGQ Sbjct: 192 SVEAGTHRLARISPFGSADKRQTSFAAVEVIPLMEEANQVDVPEGDIRVDVFRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+ +L L+ ++ Sbjct: 252 SVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNRAAAMRVLQTRLLLLQKEEEAAKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + T WG Q+RSY L Q+VKDLRT E +P+ V DGDLD F+ A + Sbjct: 312 NITA-SWGDQMRSYFLYGQQLVKDLRTGYESGNPATVFDGDLDGFIAAGI 360 >gi|298346504|ref|YP_003719191.1| peptide subunit release factor RF2 [Mobiluncus curtisii ATCC 43063] gi|298236565|gb|ADI67697.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 43063] Length = 376 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 137/361 (37%), Positives = 217/361 (60%), Gaps = 12/361 (3%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + D + Q+++ L + P LW + A+ + + + +++ Sbjct: 13 KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQK 72 Query: 62 IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ R+ D L+EL EE D +IL + + +K +++ + ++LL+GE D A Sbjct: 73 MRARIDDMEALVELGAEESGEDRDAILVDAEQTYETLKRDLDAMEVKTLLNGEYDERFAV 132 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY R+ E+ + T+ L+ EEAGIKS T + P AY Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRL R+SP+++ +R TSF+++ V P+++ + IE+ ESD +ID +R+SG Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ----KREE 294 GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L L Q K++E Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +A ++S WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ A + + Sbjct: 313 LAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367 Query: 355 K 355 K Sbjct: 368 K 368 >gi|222100137|ref|YP_002534705.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359] gi|221572527|gb|ACM23339.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359] Length = 218 Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 124/211 (58%), Positives = 158/211 (74%), Gaps = 2/211 (0%) Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAE++ F E +E GEEAGIK AT+LIKG AYG+LK E GVHRLVRISP+D+ RR Sbjct: 2 RWAERKGFDVEIVEYQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARRR 61 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P ++D + IEI D +I+T+RASG GGQHVN T+SAVRITHIPTG+VV Sbjct: 62 HTSFASVNVIPEIEDDVHIEIKPEDLKIETFRASGHGGQHVNKTESAVRITHIPTGIVVT 121 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQH+NK A +L+A+LY+LEL+ KR+EI I + +I WG QIRSYV PY Sbjct: 122 CQNERSQHQNKQTALKILKARLYQLELEKKRKEIQEI-QGELKDISWGNQIRSYVFHPYT 180 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +VKD RT +E ++ V+DGD+D F++A L Sbjct: 181 LVKDHRTGVETSNVDAVMDGDIDIFIEAELV 211 >gi|15807620|ref|NP_293897.1| peptide chain release factor 2 [Deinococcus radiodurans R1] Length = 421 Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 153/350 (43%), Positives = 214/350 (61%), Gaps = 22/350 (6%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQ--D 64 G FD +RL+ L+ + DP LW + A+ + +E R+ ++ + Q Sbjct: 69 GSTFDIPGKTRRLNELDRELSDPDLWNDQSRARQVTQEAGSVRKIVEEYAGLTSDAQGLS 128 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + D E L ED+ + LQ+ D+L R E+L + + A + V G Sbjct: 129 EMLDLADEEERELLEDEQAGLQKRVDDLYR----------ETLFTMKHADTAAIVRVKGG 178 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDWA ML RMY RWAE+R +K + L+ G++AG +S +I+G A+G + E Sbjct: 179 AGGTEAQDWAGMLARMYMRWAERRGYKVDILDEVAGDQAGYQSIEFIIRGEKAFGMMAPE 238 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHV 243 GVHRLVR+SP+DSN+RR TSF+S+ V P V ++ I I I +SD R D +R+ GAGGQ V Sbjct: 239 HGVHRLVRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGV 298 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGES 301 NTTDSAVR+TH+PTG+ V CQ RSQ KN A +L+ +LY++E++KR EE+A G+ Sbjct: 299 NTTDSAVRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMKKREAEELAARGQQ 358 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K E WG Q+RSYVL Q +KD RT + +P DVLDGDLD+ M A L Sbjct: 359 AKVE--WGSQMRSYVLD-KQYIKDHRTGLMMHNPDDVLDGDLDELMWAGL 405 >gi|239933740|ref|ZP_04690693.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] Length = 359 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 141/347 (40%), Positives = 206/347 (59%), Gaps = 6/347 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW N EA+ + HL + + ++ R+ Sbjct: 1 MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ S ++I ESD R+D YR+SG + + Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSC-NPRDS 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 D VRITH+PTG++ ERS+ +NK A N+L+A+L L +++EE A + ++ K E Sbjct: 240 DFMVRITHLPTGIMASSDSERSRTRNKVTAMNVLKARL--LGRRRQEEQAKM-DALKDEG 296 Query: 307 G--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G G Q+RSY L PYQMVKDLRT E +P V +G++D F++A + Sbjct: 297 GNPCGNQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGI 343 >gi|270285531|ref|ZP_06194925.1| peptide chain release factor 2 [Chlamydia muridarum Nigg] gi|301336928|ref|ZP_07225130.1| peptide chain release factor 2 [Chlamydia muridarum MopnTet14] Length = 220 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 125/214 (58%), Positives = 155/214 (72%), Gaps = 1/214 (0%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+RWA +K E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN Sbjct: 1 MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 ++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+ Sbjct: 61 AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E N K EI WG QIR+YV QP Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGSQIRNYVFQP 180 Query: 320 YQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 Y +VKD+RT E + ++DG+ LD F+KA LA Sbjct: 181 YTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLA 214 >gi|300087667|ref|YP_003758189.1| peptide chain release factor 2 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527400|gb|ADJ25868.1| peptide chain release factor 2 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 327 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 204/323 (63%), Gaps = 15/323 (4%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA---LEEDDCSILQETSDN 91 W++ ++ +MR L + + ++ RL + L L + +D + + SD Sbjct: 7 FWEDSDNSQKVMRRLTGLKKTVEQWRSLERRLNELAELDALGDPEMAQDVDAETEAVSDE 66 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L R++ E+ Y SGE D +A L +HAGAGG ESQDWA MLL MY +W E+R + Sbjct: 67 LDRLEFELSY-------SGEYDERNALLSIHAGAGGVESQDWAEMLLAMYVKWGERRDYD 119 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E LE G+EAGIKS T +G AYG L+ E GVHRL+R+SP+DS+ RHTSF+ + V Sbjct: 120 VEILETSAGDEAGIKSVTAEFRGRYAYGNLRSEHGVHRLIRLSPFDSDHARHTSFALVEV 179 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P V++ E+EI+ D +++ +RASGAGGQ+V SAVR+TH P+G+VV Q ERSQH+ Sbjct: 180 MPEVEEDAEVEINPDDIKLEAFRASGAGGQNVQKVSSAVRLTHTPSGIVVTAQTERSQHQ 239 Query: 272 NKAQAWNMLRAKLYELELQKRE-EIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ++LRA+L + ++ ++E E A + GE E WG QIRSYVL PY+MVKD RT Sbjct: 240 NREVAMSLLRARLLQRKIAEQEAEKARLKGERISNE--WGSQIRSYVLHPYKMVKDHRTG 297 Query: 330 IEKTSPSDVL-DGDLDDFMKATL 351 +E + VL +G+++ F++A L Sbjct: 298 METGNTQAVLEEGNIEMFIEAYL 320 >gi|308233692|ref|ZP_07664429.1| peptide chain release factor 2 [Atopobium vaginae DSM 15829] gi|328943371|ref|ZP_08240836.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829] gi|327491340|gb|EGF23114.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829] Length = 375 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 139/326 (42%), Positives = 191/326 (58%), Gaps = 2/326 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSI 84 L + + W + A +M + L ++ L D ELA D + Sbjct: 40 LTVQAGETTFWNDAAHATEVMAQLGALKEKLNQYDSAYKLLLDVQAAFELADTSSQDDEM 99 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 L E ++ ++ + + + E D+ A + + G GG E+QDW +ML +MY + Sbjct: 100 LIEAKRLANKLTNVLDNLELNTWFNDEFDTGAAIVTITPGQGGLEAQDWCDMLFKMYLHY 159 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 E++ + + + GE GI AT + G NAYG L+ EQGVHRLVRISP D+ RR T Sbjct: 160 CERKSWTVDINDAPVGEVIGIDRATFTVTGKNAYGMLRAEQGVHRLVRISPTDAKKRRQT 219 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 +F+ + V PV+ +IE++I D RID Y ASG GGQ VNTTDSAVRITHIPTG+VV CQ Sbjct: 220 TFAGVEVLPVLPQTIEVQIDTQDIRIDVYHASGPGGQGVNTTDSAVRITHIPTGIVVTCQ 279 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ +NKA A +LR+KLYELE Q+REE + K +I WG QIR+Y+L P+Q+VK Sbjct: 280 NERSQLQNKAAAMQILRSKLYELEKQRREEELDDLRGPKHDISWGNQIRNYILYPFQLVK 339 Query: 325 DLRTNIEKTSPSDVL-DGDLDDFMKA 349 D RT +E + VL +GDLD F+ A Sbjct: 340 DTRTQVETGNVDAVLQEGDLDQFIIA 365 >gi|150004050|ref|YP_001298794.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482] gi|254882894|ref|ZP_05255604.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA] gi|294778088|ref|ZP_06743522.1| peptide chain release factor 2-like protein [Bacteroides vulgatus PC510] gi|319639698|ref|ZP_07994431.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A] gi|149932474|gb|ABR39172.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482] gi|254835687|gb|EET15996.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA] gi|294448146|gb|EFG16712.1| peptide chain release factor 2-like protein [Bacteroides vulgatus PC510] gi|317388662|gb|EFV69508.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A] Length = 371 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 145/348 (41%), Positives = 212/348 (60%), Gaps = 15/348 (4%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D +N + ++ +T+ P W + +A+ MR+ + L I +E++ + D L Sbjct: 21 LDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQKWIDGYREVK-TMADEL--- 76 Query: 74 ELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ELA + +DD +E Q+ VE + +++L EAD D L+++ GAGGTESQ Sbjct: 77 ELAFDFCKDDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQMDCVLKINCGAGGTESQ 136 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE +K + DG+EAGIK+ T+ I+G AYG+LKGE GVHRLV Sbjct: 137 DWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMNIEGSFAYGYLKGENGVHRLV 196 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+SPY++ +R TSF+S++V P+VDDSIE+ I + DT+R+ GAGGQ+VN +S VR Sbjct: 197 RVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWDTFRSGGAGGQNVNKVESGVR 256 Query: 252 ITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + TG ++++ + R Q KNK A LR+ LY+ ELQ R E E+ K Sbjct: 257 LRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVEAGK 316 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 317 KKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363 >gi|168025410|ref|XP_001765227.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683546|gb|EDQ69955.1| predicted protein [Physcomitrella patens subsp. patens] Length = 406 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 133/335 (39%), Positives = 211/335 (62%), Gaps = 7/335 (2%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED- 80 RL+ L + LW + A+ + + + + +++ ++++ + +++EL E++ Sbjct: 61 RLADLELQASQDTLWDDPDAAQRTLSDLAEVKENLDLLQQFENKVEEAQLIIELMGEKEG 120 Query: 81 -DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 D ++QE S+ + + ++ + LLSG D A + + AGAGGT++QDWA MLLR Sbjct: 121 PDGGLVQEASEIVSWLSNALDKFELAKLLSGPYDRRGARVTISAGAGGTDAQDWAEMLLR 180 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+RWAEK+ + + +E GEEAGIKS T + G AYG+L E+G HRLVR SP+++ Sbjct: 181 MYSRWAEKQGYTVKVMEKSPGEEAGIKSVTFEVDGRFAYGYLASEKGTHRLVRQSPFNAK 240 Query: 200 SRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R TSF+ + V P+ ++S+++EI E++ + T RA G GGQ+VN ++AVRI HIPTG Sbjct: 241 GLRQTSFAGVEVMPIFEEESLDVEIPETELEVTTTRAGGKGGQNVNKVETAVRIVHIPTG 300 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANI-GESSKTEIGWGRQIRSYV 316 + V+C +ERSQ NK + +L+AKL + L QK ++ I G+ K E WG+QIR+YV Sbjct: 301 IAVRCTEERSQLANKIKGLRLLKAKLLVIALEQKASDLKEIRGDVVKAE--WGQQIRNYV 358 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PY++VKD+RT E + + V+DG+L F+ A L Sbjct: 359 FHPYKLVKDVRTATETSDVAGVMDGELGSFITAFL 393 >gi|281205221|gb|EFA79414.1| class I peptide chain release factor [Polysphondylium pallidum PN500] Length = 434 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 135/316 (42%), Positives = 203/316 (64%), Gaps = 11/316 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 ++E Q L I I+E+Q + A +++D S+L E S+ + + + +F+ Sbjct: 123 LKECQRLKRDIEQIEELQSNFMYYEEISGEAKKKNDQSMLSEMSECISDLYQQSTDLEFK 182 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 S++SGE D D YLE+HAGAGG +S DW+ +L MY +W++++ FK ++I GE G Sbjct: 183 SIMSGENDHEDCYLEIHAGAGGADSMDWSEILSNMYRKWSQRKDFKVTLVDISPGE-VGY 241 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K A L I+G AYGW + E GVH+L+R+SP+DS+ +RHTSF+S+ YP VDDSI I++ Sbjct: 242 KRAILKIEGEFAYGWCRSESGVHKLIRLSPFDSSGKRHTSFASVLAYPAVDDSISIDLQT 301 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D I+T R+SG GGQH N T+SAVRITH PTG+ V +RSQH+NK+ A ++L+AK+ Sbjct: 302 KDLLIETMRSSGPGGQHSNKTESAVRITHTPTGISVAVSDQRSQHQNKSIAMDLLKAKIM 361 Query: 286 ELELQKREEIANIGESSKTEI---GWG--RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 E++KR A ES ++++ GW R +R+Y + P VKD RTN+E + ++L+ Sbjct: 362 ASEIKKR---AQQEESFRSDLGVNGWASDRIVRTYTMHPQTRVKDQRTNLESLNIDEILE 418 Query: 341 G--DLDDFMKATLAIK 354 G +LD F+K L+ K Sbjct: 419 GGDELDIFIKTALSQK 434 >gi|255074407|ref|XP_002500878.1| predicted protein [Micromonas sp. RCC299] gi|226516141|gb|ACO62136.1| predicted protein [Micromonas sp. RCC299] Length = 428 Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 144/361 (39%), Positives = 216/361 (59%), Gaps = 27/361 (7%) Query: 20 VQRLSF----LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V+RL+ L+ + LW + I+AK +M E ++ + ++ L D + LE+ Sbjct: 56 VERLAATVADLDAAASEGTLWDDPIKAKAVMAELADAKEQLATARGFENLLGDAAVALEM 115 Query: 76 --ALEEDDC---------------SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 A EDD +IL E SD ++ +++ + LL G+ D+ A Sbjct: 116 IDAEREDDSLSGAAANDASAGPDPTILAELSDACDNLERQLDKWEVRRLLGGKYDAMPAL 175 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + V+AGAGGT++QDWA ML RMY W R F +E +GEEAG+KS T ++G AY Sbjct: 176 VNVYAGAGGTDAQDWAEMLERMYRGWCNSRGFTWRTVERSEGEEAGLKSVTFEVQGRFAY 235 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRAS 236 G+L+ E+G HRLVR SP+ ++ R TSF+++ V PV+D+ E+ + +SD I T R+ Sbjct: 236 GYLRSERGTHRLVRQSPFKKDATRQTSFAAVEVTPVLDEGSVEELTLRDSDLEISTMRSG 295 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEI 295 GAGGQ+VN ++AVRI H+PTG+ V+C++ERSQ NKA+ L+AKL + E Q+ ++ Sbjct: 296 GAGGQNVNKVETAVRIKHVPTGITVRCEEERSQAANKAKGLARLKAKLVAVAEEQRAADV 355 Query: 296 ANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 A I G++ + E WG+QIR+YV PY+MVKD+RT E + V+ GDLD+FM L K Sbjct: 356 AAIRGDAVRAE--WGQQIRNYVFHPYKMVKDVRTGKETSDVDGVMSGDLDEFMDEFLRWK 413 Query: 355 K 355 + Sbjct: 414 R 414 >gi|283457761|ref|YP_003362349.1| protein chain release factor B [Rothia mucilaginosa DY-18] gi|283133764|dbj|BAI64529.1| protein chain release factor B [Rothia mucilaginosa DY-18] Length = 421 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 141/330 (42%), Positives = 213/330 (64%), Gaps = 6/330 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83 L+ + P LW +V A+ + + + ++ ++ + R+ D +++ELA ED+ + Sbjct: 82 LSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRSLSSRIDDVEVMVELAEAEDEETAA 141 Query: 84 -ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +L + I+ ++E + LLSGE D +A + + +GAGG ++ D+A MLLRMY Sbjct: 142 ELLADAERECAEIRAKLEELEVLVLLSGEYDQREAVVTIRSGAGGVDAADFAEMLLRMYL 201 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAEK + T+ L+ EEAG+KS T + P A+G L E G HRLVRISP+D+ RR Sbjct: 202 RWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLVRISPFDNQGRR 261 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TSF+++ V P+++ + IEI ES+ ++D +R+SG GGQ VNTTDSAVR+TH+PTG+VV Sbjct: 262 QTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMTHLPTGIVVS 321 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQ 321 Q E+SQ +N+A A +L+++L L L+K +E A E + + WG Q+RSYVL PYQ Sbjct: 322 MQNEKSQLQNRAAALRVLQSRL--LLLRKEQEDAKKKELAGDIKASWGDQMRSYVLHPYQ 379 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKDLRT E+ + S+VLDG L+ F+ A + Sbjct: 380 MVKDLRTGYEEGNTSNVLDGGLNAFIDAGI 409 >gi|255327042|ref|ZP_05368118.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296] gi|255296259|gb|EET75600.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296] Length = 375 Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 141/330 (42%), Positives = 213/330 (64%), Gaps = 6/330 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83 L+ + P LW +V A+ + + + ++ ++ + R+ D +++ELA ED+ + Sbjct: 36 LSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRSLSSRIDDVEVMVELAEAEDEETAA 95 Query: 84 -ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +L + I+ ++E + LLSGE D +A + + +GAGG ++ D+A MLLRMY Sbjct: 96 ELLADAERECAEIRAKLEELEVLVLLSGEYDQREAVVTIRSGAGGVDAADFAEMLLRMYL 155 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAEK + T+ L+ EEAG+KS T + P A+G L E G HRLVRISP+D+ RR Sbjct: 156 RWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAGTHRLVRISPFDNQGRR 215 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TSF+++ V P+++ + IEI ES+ ++D +R+SG GGQ VNTTDSAVR+TH+PTG+VV Sbjct: 216 QTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGPGGQSVNTTDSAVRMTHLPTGIVVS 275 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQ 321 Q E+SQ +N+A A +L+++L L L+K +E A E + + WG Q+RSYVL PYQ Sbjct: 276 MQNEKSQLQNRAAALRVLQSRL--LLLRKEQEDAKKKELAGDIKASWGDQMRSYVLHPYQ 333 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 MVKDLRT E+ + S+VLDG L+ F+ A + Sbjct: 334 MVKDLRTGYEEGNTSNVLDGGLNAFIDAGI 363 >gi|212692934|ref|ZP_03301062.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855] gi|237708323|ref|ZP_04538804.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA] gi|237723533|ref|ZP_04554014.1| peptide chain release factor RF-2 [Bacteroides sp. D4] gi|265757045|ref|ZP_06090907.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA] gi|212664519|gb|EEB25091.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855] gi|229438084|gb|EEO48161.1| peptide chain release factor RF-2 [Bacteroides dorei 5_1_36/D4] gi|229457544|gb|EEO63265.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA] gi|263233544|gb|EEZ19173.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA] Length = 371 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 144/348 (41%), Positives = 212/348 (60%), Gaps = 15/348 (4%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D +N + ++ +T+ P W + +A+ MR+ + L I +E++ + D L Sbjct: 21 LDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQKWIDGYREVK-TMADEL--- 76 Query: 74 ELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ELA + +DD +E Q+ VE + +++L EAD D L+++ GAGGTESQ Sbjct: 77 ELAFDFCKDDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQMDCVLKINCGAGGTESQ 136 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RMY RWAE +K + DG+EAGIK+ T+ I+G +YG+LKGE GVHRLV Sbjct: 137 DWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMNIEGSFSYGYLKGENGVHRLV 196 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+SPY++ +R TSF+S++V P+VDDSIE+ I + DT+R+ GAGGQ+VN +S VR Sbjct: 197 RVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWDTFRSGGAGGQNVNKVESGVR 256 Query: 252 ITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + TG ++++ + R Q KNK A LR+ LY+ ELQ R E E+ K Sbjct: 257 LRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVEAGK 316 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 317 KKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363 >gi|313204692|ref|YP_004043349.1| bacterial peptide chain release factor 2 (brf-2) [Paludibacter propionicigenes WB4] gi|312444008|gb|ADQ80364.1| bacterial peptide chain release factor 2 (bRF-2) [Paludibacter propionicigenes WB4] Length = 368 Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 210/332 (63%), Gaps = 13/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ MR+ + L N ++ ++ + + + EE ++ +E Sbjct: 36 RTQVPGFWDDAKAAEAQMRKVKELKNWVTGYNAVKTAADELQLAFDFYKEE---AVSEEE 92 Query: 89 SDNLQRIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 D R +E+ E + +++LS E D A +++ GAGGTE+QDWA+ML RMY RW E+ Sbjct: 93 VDEAYRHAMELLENIEMKNMLSHEEDKLGAVIKIVGGAGGTEAQDWASMLFRMYQRWCER 152 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + + E + +G+EAGIK+ T+ I+G AYG+LK E GVHRLVR+SP+++ +R TSF+ Sbjct: 153 QGYACEITNLQEGDEAGIKTVTMQIEGEMAYGYLKSENGVHRLVRVSPFNAQGKRMTSFT 212 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR--------ITHIPTGV 259 S++V P+VDD+IEIE++ DT+R+SGAGGQ+VN ++ VR +T+ P + Sbjct: 213 SVYVVPLVDDTIEIEVNPGMLSWDTFRSSGAGGQNVNKVETGVRLHYKFVNPVTNQPDEI 272 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 V++ + RSQ NK A +L+++LYELEL+KR + E+ K +I WG QIRSYV Sbjct: 273 VIENTESRSQFGNKDNAIRLLKSQLYELELEKRRAATAVVEAGKKKIEWGSQIRSYVFDD 332 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + ++ + V+DGD+D F+KA L Sbjct: 333 -RRVKDHRTNYQTSNVNGVMDGDIDAFIKAYL 363 >gi|325280722|ref|YP_004253264.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712] gi|324312531|gb|ADY33084.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712] Length = 370 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 139/346 (40%), Positives = 211/346 (60%), Gaps = 11/346 (3%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D D L + +T+ P W + +A+ +M++ + L I + + + D +L Sbjct: 21 LDIDRKKIELEEVEMRTQAPDFWNDAKQAEKVMKQVRELKGWIEGCEAVSRSVDDLNVLF 80 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + A E + +E + VE + +++L GEAD L++++GAGGTESQDW Sbjct: 81 DFAKEGEATE--EEVDTHYAETLQLVEELELKNMLRGEADQMSCILKINSGAGGTESQDW 138 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+ML+RMY RWAE +K I +G+EAGIK+ TL ++G AYG+LKGE GVHRLVR+ Sbjct: 139 ASMLMRMYMRWAEANNYKLTVSNIQEGDEAGIKTVTLQLEGDFAYGYLKGENGVHRLVRV 198 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+++ +R TSF+S++V P+VDDSIEI I+ +D DT+R+ GAGGQ+VN ++ VR+ Sbjct: 199 SPFNAQGKRMTSFASVFVTPLVDDSIEIAINAADISWDTFRSGGAGGQNVNKVETGVRLR 258 Query: 254 H----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 + TG ++++ + RSQ N+ A +LR+ LY++ELQ+R ES+K + Sbjct: 259 YNYKDPDTGETREILIENTETRSQLDNRENAMRLLRSMLYDMELQRRMAEQQKIESNKKK 318 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIRSYV + VKD RTN + + V+DG +D F+KA L Sbjct: 319 IEWGSQIRSYVFDD-RRVKDHRTNFQTSDVGGVMDGKIDGFIKAYL 363 >gi|269976501|ref|ZP_06183486.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1] gi|269935302|gb|EEZ91851.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1] Length = 378 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 134/358 (37%), Positives = 215/358 (60%), Gaps = 17/358 (4%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + + D ++++ L + P LW + A+ + + + + ++ Sbjct: 12 KLQATFDTVEAVMDPALLQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQT 71 Query: 62 IQDRLCDNLILLELALEE--------DDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 ++ RL D L+EL EE D +I+++ + + ++ + +LL+GE D Sbjct: 72 MKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYD 131 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 A + + +GAGG ++ D+A MLLRMY RWAE+ + T+ ++ EEAGIKSAT I Sbjct: 132 ERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEID 191 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 P AYG L E G HRL R+SP+++ +R TSF+++ V P+++ + I++ ESD +ID + Sbjct: 192 APYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVF 251 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL----YELEL 289 R+SG GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L ++ E Sbjct: 252 RSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLLRHQQEH 311 Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +K++E+A ++S WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ Sbjct: 312 EKKKELAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDTFI 364 >gi|134104518|pdb|2IHR|1 Chain 1, Rf2 Of Thermus Thermophilus Length = 365 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 158/350 (45%), Positives = 214/350 (61%), Gaps = 5/350 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+++L LGG+FD RL L + EDP LW + A+ + +E L + + Sbjct: 5 RLAQRLEGLGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L L L+E E+ ++ E + + KL+ Y Q +LL+ +A L + Sbjct: 65 LESDLQGLLELMEELPAEEREALKPELEEAAK--KLDELYHQ--TLLNFPHAEKNAILTI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIRSYVL VKD RT + + P +VLDGDL D + A L Sbjct: 301 EVRPIEWGSQIRSYVLD-KNYVKDHRTGLMRHDPENVLDGDLMDLIWAGL 349 >gi|227874895|ref|ZP_03993048.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243] gi|306818191|ref|ZP_07451922.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239] gi|307701756|ref|ZP_07638770.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16] gi|227844670|gb|EEJ54826.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243] gi|304649155|gb|EFM46449.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239] gi|307613014|gb|EFN92269.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16] Length = 378 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 134/358 (37%), Positives = 215/358 (60%), Gaps = 17/358 (4%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + + D ++++ L + P LW + A+ + + + + ++ Sbjct: 12 KLQATFDTVEAVMDPALLQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQT 71 Query: 62 IQDRLCDNLILLELALEE--------DDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 ++ RL D L+EL EE D +I+++ + + ++ + +LL+GE D Sbjct: 72 MKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYD 131 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 A + + +GAGG ++ D+A MLLRMY RWAE+ + T+ ++ EEAGIKSAT I Sbjct: 132 ERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEID 191 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 P AYG L E G HRL R+SP+++ +R TSF+++ V P+++ + I++ ESD +ID + Sbjct: 192 APYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVF 251 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL----YELEL 289 R+SG GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L ++ E Sbjct: 252 RSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLLRHQQEH 311 Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +K++E+A ++S WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ Sbjct: 312 EKKKELAGDVKAS-----WGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDAFI 364 >gi|323359619|ref|YP_004226015.1| protein chain release factor B [Microbacterium testaceum StLB037] gi|323275990|dbj|BAJ76135.1| protein chain release factor B [Microbacterium testaceum StLB037] Length = 370 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 145/324 (44%), Positives = 202/324 (62%), Gaps = 3/324 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P LW +V A+ + H + I EI+ RL D +L+ELA+E DD E L Sbjct: 43 PDLWDDVDNAQKVTSRLSHRQAELKRITEIEQRLDDLEVLVELAIEMDDEDSADEARREL 102 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +K + + ++LL GE DS A + + +GAGG ++ D+A MLLRMY RWAE+ K+ Sbjct: 103 ASLKDVIGQLEVQTLLDGEYDSRSAVVTIRSGAGGDDATDFAEMLLRMYLRWAERHKYPV 162 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 + ++ E AGIKSAT + P AYG L E G HRL RISP+ +R TSF+++ V Sbjct: 163 KVMDTSYAEGAGIKSATFEVDVPYAYGTLSVEAGTHRLARISPFGGADKRQTSFAAVEVI 222 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 PV+++++E+E+ E D R+D +R+SG GGQ VNTTDSAVRITHIPTG+VV Q E+SQ +N Sbjct: 223 PVMEEAVEVEVPEGDIRVDVFRSSGPGGQSVNTTDSAVRITHIPTGLVVSMQNEKSQIQN 282 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKT-EIGWGRQIRSYVLQPYQMVKDLRTNIE 331 +A A +L+ +L L L++ EE A E + T WG Q+RSY L Q+VKDLRT E Sbjct: 283 RAAAMRVLQTRL--LLLKREEEAAKKKELAGTITASWGDQMRSYFLYGQQLVKDLRTGYE 340 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 +P+ V DGDLD + A + +K Sbjct: 341 VGNPAVVFDGDLDGLIAAGIRWRK 364 >gi|224025165|ref|ZP_03643531.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM 18228] gi|224018401|gb|EEF76399.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM 18228] Length = 371 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 142/351 (40%), Positives = 209/351 (59%), Gaps = 11/351 (3%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 L D DN ++ +T+ P W + +A+ M++ + L N I E++ L D Sbjct: 16 ALHRYLDIDNKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKTLQNWIEGYNEVK-TLAD 74 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L L +D+ E D + +E + +++L EAD D L++++GAGGT Sbjct: 75 EL-ELSFDFYKDELVTEAEVDDAYNKAMQAIEELELKNMLRSEADQMDCVLKINSGAGGT 133 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDWA+ML+RMY RWAE +K + +G+EAGIK+ T+ I+G AYG+LKGE GVH Sbjct: 134 ESQDWASMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGSYAYGYLKGENGVH 193 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR+SPY++ +R TSF+S++V P+VDDSIE+ + + DT+R+ GAGGQ+VN +S Sbjct: 194 RLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQNVNKVES 253 Query: 249 AVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 VR+ + TG ++++ + R Q KNK A LR+ LY+ ELQ R E E Sbjct: 254 GVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVE 313 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 314 AGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 363 >gi|307111728|gb|EFN59962.1| hypothetical protein CHLNCDRAFT_133064 [Chlorella variabilis] Length = 426 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 141/344 (40%), Positives = 213/344 (61%), Gaps = 10/344 (2%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D + +R++ L LW+ A ++++ L ++ ++ +L D + +E Sbjct: 64 DLPSLKRRMAELEEAAGASDLWEQRARATAVLQQLTALREEVAALERFCGQLEDLGVAME 123 Query: 75 LALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L LE +D + Q + I +E + LL G D A L + AGAGGT++ Sbjct: 124 L-LEMEDEAGAQAMAAEAGSICDGLAAGLEAWELRRLLGGPYDDRGAVLTIQAGAGGTDA 182 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML RMY RWAEK+ +T ++ GEEAGIKS + + G AYG+L GE+G HRL Sbjct: 183 QDWAEMLERMYLRWAEKQGHRTRVVDRQQGEEAGIKSVEIEVDGRYAYGYLHGEKGTHRL 242 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VR SP+++ + R TSF+++ V P++ + + E+E+ ESD I T R++GAGGQ+VN ++A Sbjct: 243 VRQSPFNAKAARQTSFAAVEVMPMLGELVDEVELPESDLEITTMRSAGAGGQNVNKVETA 302 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIG 307 VRI H+PTG+ V+CQ ERSQ +NK+ A ML+AKL + + Q+ +E+A I G+ K E Sbjct: 303 VRIKHLPTGIAVKCQMERSQAQNKSIALGMLKAKLLVVAQEQQLQEVAEIRGDLVKAE-- 360 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG+QIR+YV PY++VKD+RT E + + V+DG+L FM+A L Sbjct: 361 WGQQIRNYVFHPYKLVKDVRTGQETSDVAGVMDGELQPFMQAYL 404 >gi|325283910|ref|YP_004256451.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP] gi|324315719|gb|ADY26834.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP] Length = 365 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 136/335 (40%), Positives = 207/335 (61%), Gaps = 5/335 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L L D +RL+ L+ DP LW + A+ + +E + + + Sbjct: 3 ELQEKLASLREYLDIPGKERRLNELDHFLADPELWNDQNRARSITQEATSVRGVVEKYQG 62 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L +LELA ED+ +L E +++ +++ Y+ E+L + + A + V Sbjct: 63 LKSDLDGLAEMLELAESEDEREMLLEEQGGIEQ-RVDELYR--ETLFTMKHADTPAIIRV 119 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTE+QDWA ML RMY RWAE+R ++ + L+ G++AG +S +I+G AYG + Sbjct: 120 KGGAGGTEAQDWAGMLARMYMRWAERRGYRVDILDEQPGDQAGYQSIEFIIRGEKAYGMM 179 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 E GVHRLVR+SP+DSN+RR TSF+S+ V P V ++ I+I I +SD R D +R+ G+GG Sbjct: 180 SAEHGVHRLVRVSPFDSNNRRQTSFASVDVVPEVPEEEIDIHIPDSDLRRDVFRSQGSGG 239 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+TH+PTG+ V CQ RSQ KN A +L+ +LY++E++KREE A Sbjct: 240 QGVNTTDSAVRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMRKREEEALAAR 299 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 ++ + WG Q+RSYVL Q +KD R+ + + +P Sbjct: 300 GQQSSVEWGSQMRSYVLDK-QYIKDHRSGLMQHNP 333 >gi|332827204|gb|EGJ99978.1| hypothetical protein HMPREF9455_03672 [Dysgonomonas gadei ATCC BAA-286] Length = 318 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 130/265 (49%), Positives = 186/265 (70%), Gaps = 10/265 (3%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +KL VE + +++L E D A L+V++GAGGTE QDWA+ML RMY RW + R +KT Sbjct: 49 VKL-VENLELKNMLRREEDKLGAVLKVNSGAGGTEGQDWASMLFRMYQRWCDARGYKTTI 107 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 DG+EAGIK+ATL ++G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+ Sbjct: 108 THWQDGDEAGIKTATLQVEGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVYVVPL 167 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQE 266 VDD+IEIE+++SD DT+R+SGAGGQ+VN ++ VR+ + TG +V++ + Sbjct: 168 VDDTIEIEVNQSDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTES 227 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ NK A +L+++LYE+EL++R + E+ K +I WG QIRSYV + VKD Sbjct: 228 RSQFGNKDNAIRLLKSQLYEMELERRSREQSKIEAGKKKIEWGSQIRSYVFDD-RRVKDH 286 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351 RTN + ++ + V+DGDLDDF+KA L Sbjct: 287 RTNYQTSNVNAVMDGDLDDFIKAYL 311 >gi|33860740|ref|NP_892301.1| peptide chain release factor 2 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33633682|emb|CAE18639.1| peptide chain release factor RF-2 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 373 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 141/351 (40%), Positives = 209/351 (59%), Gaps = 2/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+++L D N V + L P W N +AK M + + + + + Sbjct: 13 ELTKRLGNAQDCLDVPNLVAKKKELEQIAAQPEFWGNQADAKKHMLNLDDVRDQLQLLDK 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D LEL E + ++ E+ L ++ ++ +F+ LL GE D A + + Sbjct: 73 WKMFISDAEASLELYSLEPEEEMIVESHQGLVTLRENLDKWEFQRLLCGEYDKEAAIVSI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGT++QDW +LLRMY+RW + E ++ DGEEAGIKS T + G AYG+L Sbjct: 133 NAGAGGTDAQDWVEILLRMYSRWVDNNGMSLEITDLSDGEEAGIKSVTFEVNGKYAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G HRLVRISP+++N +R TSF+ + V P +D SI ++I + D I T R+ GAGGQ Sbjct: 193 QNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDQSISLDIPDKDLEITTSRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGE 300 +VN ++AVRI H+P+G+ V+C QERSQ +NK +A +L+AKL + ++R EI++I + Sbjct: 253 NVNKVETAVRIVHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRASEISDI-K 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E WG QIR+YV PYQMVKDLRT E VL+G LD F+ L Sbjct: 312 GDIVEAAWGNQIRNYVFHPYQMVKDLRTMKETNDLDAVLNGGLDQFIHELL 362 >gi|213580224|ref|ZP_03362050.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 209 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 126/199 (63%), Positives = 151/199 (75%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTGVVVQCQQERSQH 270 ITHIPTG+V QCQ +RSQH Sbjct: 191 ITHIPTGIVTQCQNDRSQH 209 >gi|123965444|ref|YP_001010525.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9515] gi|123199810|gb|ABM71418.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9515] Length = 354 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 140/340 (41%), Positives = 207/340 (60%), Gaps = 2/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD + V + L +P W N AK M + + + + + + + D Sbjct: 5 VFDVPSLVAKRKELEQIAAEPDFWINQAAAKKHMLNLDDVRDQLQLLDKWKILIADAEAS 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LEL + + ++ E+ L ++ ++ +F+ LLSGE D A + ++AGAGGT++QD Sbjct: 65 LELYSLDPEEEMIVESHLGLVTLRENLDKWEFQRLLSGEYDKESAIVSINAGAGGTDAQD 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W +LLRMY+RWA+ E ++ +GEEAGIKS T + G AYG+L+ E+G HRLVR Sbjct: 125 WVEILLRMYSRWADNNGMSLEITDLSNGEEAGIKSVTFEVNGKYAYGYLQNEKGTHRLVR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+ + V P +D SI +EI + D I T R+ GAGGQ+VN ++AVRI Sbjct: 185 ISPFNANGKRQTSFAGVEVMPKLDQSISLEIPDKDLEITTSRSGGAGGQNVNKVETAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 H+P+G+ V+C QERSQ +NK +A +L+AKL + ++R EI++I + E WG Q Sbjct: 245 LHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRAAEISDI-KGDIVEAAWGNQ 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PYQMVKDLRT E VL+G LD F+ L Sbjct: 304 IRNYVFHPYQMVKDLRTMKETNDLDGVLNGGLDQFIHELL 343 >gi|261881148|ref|ZP_06007575.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361] gi|270332153|gb|EFA42939.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361] Length = 374 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 134/332 (40%), Positives = 209/332 (62%), Gaps = 12/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + L N + +++ L N + L +++ +E Sbjct: 36 RTQAPDFWDDPKRAEAQMKKVKGLQNWLKDYSDVE--LLANELELAFDYYKEELVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++ +E +F+++L E DS DA L++++GAGGTESQDWA ML+RMY RW E Sbjct: 94 DADYAKVIKAIEDLEFKNMLRSEEDSMDAVLKINSGAGGTESQDWAQMLMRMYMRWCESH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K + DG+EAGIKS T+ ++G AYG+LK E GVHRLVR+SPY++ +R TSF+ Sbjct: 154 GYKVTITNLQDGDEAGIKSVTMTVEGGEFAYGYLKSENGVHRLVRVSPYNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259 S+++ P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + TG + Sbjct: 214 SVFISPLVDDTIEVYVDPARLSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEKEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 +++ + R Q KNKA+A +L+++LY+ E++KR E E+ K +I WG QIRSYV Sbjct: 274 LIENTETRDQPKNKAKAMLLLKSQLYDREMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + V+DGDLD F+KA L Sbjct: 334 -RRVKDHRTNYQTSDVDGVMDGDLDGFIKAYL 364 >gi|332299528|ref|YP_004441449.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM 20707] gi|332176591|gb|AEE12281.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM 20707] Length = 373 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 150/364 (41%), Positives = 218/364 (59%), Gaps = 23/364 (6%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + LG D D +L +T+ P W +V A+ MR + + I + Sbjct: 9 ELLERTKALGRYLDIDQRRVQLEEEELRTQAPDFWDDVPRAQQQMRRVGEIRSWIEAFEA 68 Query: 62 IQDRLCDNLILL-----ELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSN 115 + D + L E A+EE Q+ D R IKL VE + ++LS E D Sbjct: 69 V-DAATQEVALAYDFYKEEAIEE------QDVDDAYARAIKL-VEDLELRNMLSAEEDRL 120 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 A L+++AGAGGTESQDWA+ML+RMY RWAE+ +K DG++AGIK+ T+ I+G Sbjct: 121 GAVLKINAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDGDDAGIKTVTMQIEGE 180 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+E++ DT+R+ Sbjct: 181 LAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEVEVNPGLLSWDTFRS 240 Query: 236 SGAGGQHVNTTDSAVRI----THIPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 SGAGGQ+VN ++ VR+ T TG +V++ + RSQ N+ A +LR++LY+ Sbjct: 241 SGAGGQNVNKVETGVRLHYQYTDPDTGETEEIVIENTETRSQMDNRENALRLLRSQLYDK 300 Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 EL++R + E++K +I WG QIRSYV + VKD RT + + + V+DGDLD F+ Sbjct: 301 ELERRRAAQSEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQTSDVNGVMDGDLDAFI 359 Query: 348 KATL 351 KA L Sbjct: 360 KAYL 363 >gi|293977889|ref|YP_003543319.1| bacterial peptide chain release factor 2 [Candidatus Sulcia muelleri DMIN] gi|292667820|gb|ADE35455.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Sulcia muelleri DMIN] Length = 345 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 111/249 (44%), Positives = 171/249 (68%), Gaps = 6/249 (2%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F G+ D+ +A L++ AGAGGTES DWA+ML RMY WAEK FK + + G+ Sbjct: 101 EFTKFFFGKEDNLNAVLQISAGAGGTESCDWASMLYRMYIMWAEKHNFKIKKINSLQGDI 160 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G++S T ++KG + +G+LKGE GVHRLVRISP+D NS+RHTSF+S+++YP++DD I I+ Sbjct: 161 IGLRSITFIVKGLSPFGYLKGENGVHRLVRISPFD-NSKRHTSFASVYIYPLIDDDINIK 219 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ SD +T+R+ G+GGQ+VN +S VR+ H PT ++++ + +SQ NK +A +L++ Sbjct: 220 INTSDISWNTFRSRGSGGQNVNKVESGVRLHHHPTNIIIENSETKSQFNNKIKALKLLKS 279 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +L+ +E + + K +I W QIR+Y++ PY++VKDLRT E + VL+G+ Sbjct: 280 RLFYIEKKSKNTTC-----IKKKIEWSSQIRNYIMHPYKLVKDLRTGYETSDIESVLNGE 334 Query: 343 LDDFMKATL 351 +D F+K L Sbjct: 335 IDIFLKKNL 343 >gi|242050470|ref|XP_002462979.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor] gi|241926356|gb|EER99500.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor] Length = 363 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 129/316 (40%), Positives = 201/316 (63%), Gaps = 7/316 (2%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE--IQDRLCDNLILLELALEED 80 ++ L K+ D LW + +A+ ++ + + + + + +Q + ++ L L+ Sbjct: 50 IASLEKKSADSSLWDDPSKAQEILVSLTEVKDRVKLLNDFKLQVEEAETIVKLTEELDSI 109 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D +L+E S ++ + ++ + LLSG D A + + AGAGGT++QDWA+MLLRM Sbjct: 110 DTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGAVINISAGAGGTDAQDWADMLLRM 169 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RW EK+++KT +E GEEAGIKSAT+ ++G AYG++ GE+G HR+VR SP+++ Sbjct: 170 YVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYAYGYISGEKGTHRIVRQSPFNAKG 229 Query: 201 RRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R TSF+ + V P++ ++S+ ++I E D I RA G GGQ+VN ++AVR+ HIPTG+ Sbjct: 230 LRQTSFAGVEVMPLLPEESMAVDIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIPTGI 289 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVL 317 V+C +ERSQ NK +A N L+AKL + E Q+ EI I G+ K E WG+QIR+YV Sbjct: 290 AVRCSEERSQLANKIKALNRLKAKLLVIAEEQRASEIKQIRGDMVKAE--WGQQIRNYVF 347 Query: 318 QPYQMVKDLRTNIEKT 333 PY++VKD+RT E + Sbjct: 348 HPYKLVKDVRTGCETS 363 >gi|325299167|ref|YP_004259084.1| Class I peptide chain release factor [Bacteroides salanitronis DSM 18170] gi|324318720|gb|ADY36611.1| Class I peptide chain release factor [Bacteroides salanitronis DSM 18170] Length = 371 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 139/333 (41%), Positives = 206/333 (61%), Gaps = 15/333 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86 +T+ P W + +A+ M++ + L I E++ L D L ELA + +D+ Sbjct: 36 RTQAPGFWDDAKKAEAQMKKVKTLQGWIDGYNEVK-TLADEL---ELAFDFYKDELVSEA 91 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + + + VE + +++L EAD D L++++GAGGTESQDWA+ML+RMY RWAE Sbjct: 92 EVDEAYVQAQKAVEELELKNMLRSEADQMDCVLKINSGAGGTESQDWASMLMRMYMRWAE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +K + +G+EAGIK+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF Sbjct: 152 SHGYKLSVANLQEGDEAGIKTVTMNIEGAYAYGYLKGENGVHRLVRVSPYNAQGKRMTSF 211 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG---- 258 +S++V P+VDDSIE+ + + DT+R+ GAGGQ+VN +S VR+ + TG Sbjct: 212 ASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEE 271 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 ++++ + R Q KNK A LR+ LY+ ELQ R E E+ K +I WG QIRSYV Sbjct: 272 ILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFD 331 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 332 D-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363 >gi|198274326|ref|ZP_03206858.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135] gi|198272816|gb|EDY97085.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135] Length = 371 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 137/331 (41%), Positives = 204/331 (61%), Gaps = 11/331 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + L I+ +E++ L D L L +D+ +E Sbjct: 36 RTQAPGFWDDQKAAEAQMKKVKALQQWITGYQEVK-TLADEL-QLSFDFYKDELVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + VE + +++L EAD D L++++GAGGTESQDWA+ML+RMY RWAE Sbjct: 94 DEAYSKAISAVEELELKNMLRSEADQMDCVLKINSGAGGTESQDWASMLMRMYMRWAESN 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +G+EAGIK+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S Sbjct: 154 GYKLSVANLQEGDEAGIKTVTMNIEGSYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260 ++V P+VDDSIE+ + + DT+R+ GAGGQ+VN +S VR+ + TG ++ Sbjct: 214 VFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEIL 273 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 ++ + R Q KNK A LR+ LY+ ELQ R E E+ K +I WG QIRSYV Sbjct: 274 IENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFDD- 332 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 333 RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 363 >gi|168702592|ref|ZP_02734869.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246] Length = 342 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 133/328 (40%), Positives = 193/328 (58%), Gaps = 5/328 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K + W N +AK ++ + + + + +E+ D + ELA E+D + Sbjct: 5 LEAKQAEGDFWNNPEKAKSVIGQLKVCNALLKPYEELTAAANDIKAMAELA--EEDAAFE 62 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E LQ+ + + E + + ++ G+ DS A + + GAGGT++ D+A ML R Y RWA Sbjct: 63 SELEPALQKAETQYEAFELQIMMGGKHDSRSAIVTIKPGAGGTDACDFAEMLFRAYGRWA 122 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 ++ F E +I +EAG+ S + I GP AYG+++ E GVHRLVRISP+ R TS Sbjct: 123 QRHGFSVEDEDIEPNQEAGVASVSFKIVGPYAYGYMQSEIGVHRLVRISPFGGGDTRQTS 182 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F++I V P + D IEI I ++D + T+ G GGQHVN T S VR+ H +G+ +C+ Sbjct: 183 FAAIDVLPELPDDIEIVIKDTDYEVQTFSTGGPGGQHVNKTQSGVRLIH-KSGIRAECRM 241 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 RSQHKNKA+A ML+ +L +E QKR A +K EI +G QIRSYVLQPY +V+D Sbjct: 242 GRSQHKNKAEALKMLQTRLEAVEEQKRMGDAVKSYDAKGEIAFGSQIRSYVLQPYTLVRD 301 Query: 326 LRTNIEKTSPS--DVLDGDLDDFMKATL 351 R I+ +P+ DVLDG+ D FM A L Sbjct: 302 ERDGIDVKTPAVNDVLDGNFDQFMHAYL 329 >gi|46200154|ref|YP_005821.1| peptide chain release factor 2 [Thermus thermophilus HB27] gi|55980111|ref|YP_143408.1| peptide chain release factor 2 [Thermus thermophilus HB8] gi|218766794|pdb|3F1E|X Chain X, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766850|pdb|3F1G|X Chain X, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|46197782|gb|AAS82194.1| bacterial peptide chain release factor 2 (RF-2) [Thermus thermophilus HB27] gi|55771524|dbj|BAD69965.1| peptide chain release factor 2 [Thermus thermophilus HB8] Length = 378 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 156/344 (45%), Positives = 208/344 (60%), Gaps = 5/344 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD RL L + EDP LW + A+ + +E L + + ++ L L Sbjct: 27 GGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLESDLQGLL 86 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+E E+ ++ E + + KL+ Y Q +LL+ +A L + GAGGTE+ Sbjct: 87 ELMEELPAEEREALKPELEEAAK--KLDELYHQ--TLLNFPHAEKNAILTIQPGAGGTEA 142 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L E GVHRL Sbjct: 143 CDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSPEAGVHRL 202 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ VNTTDSAV Sbjct: 203 VRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGVNTTDSAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE I WG Sbjct: 263 RVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEVRPIEWGS 322 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYVL VKD RT + + P +VLDGDL D + A L K Sbjct: 323 QIRSYVLD-KNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 365 >gi|88192320|pdb|2B9M|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf2 And Is Described In Remark 400 Length = 365 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 156/350 (44%), Positives = 211/350 (60%), Gaps = 5/350 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+++L L G D RL L + EDP LW + A+ + +E L + + Sbjct: 5 RLAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L L L+E E+ ++ E + + KL+ Y Q +LL+ +A L + Sbjct: 65 LESDLQGLLELMEELPAEEREALKPELEEAAK--KLDELYHQ--TLLNFPHAEKNAILTI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIRSYVL VKD RT + + P +VLDGDL D + A L Sbjct: 301 EVRPIEWGSQIRSYVLD-KNYVKDHRTGLMRHDPENVLDGDLMDLIWAGL 349 >gi|332886361|gb|EGK06605.1| peptide chain release factor 2 [Dysgonomonas mossii DSM 22836] Length = 318 Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 125/261 (47%), Positives = 182/261 (69%), Gaps = 9/261 (3%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E + +++L E D A L++++GAGGTE QDWA+ML RMY RW E +K+KT Sbjct: 52 IENLELKNMLRREEDKLGAVLKINSGAGGTEGQDWASMLFRMYQRWCEDKKYKTTITNWQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 DG+EAGIK+ATL ++G AYG+LK E GVHRLVR+SP+++ +R TSF+S++V P+VDD+ Sbjct: 112 DGDEAGIKTATLQVEGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVVPLVDDT 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270 I+I+I+ SD DT+R+SGAGGQ+VN ++ VR+ + TG +V++ + RSQ Sbjct: 172 IDIDINLSDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTESRSQF 231 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK A +L+++LYELEL++R + E+ K +I WG QIRSYV + VKD RTN Sbjct: 232 GNKDNAIRLLKSQLYELELERRSREQSKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNY 290 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 + ++ + V+DGDLDDF+K L Sbjct: 291 QTSNVNAVMDGDLDDFIKEYL 311 >gi|228469749|ref|ZP_04054715.1| peptide chain release factor 2, programmed [Porphyromonas uenonis 60-3] gi|228308684|gb|EEK17417.1| peptide chain release factor 2, programmed [Porphyromonas uenonis 60-3] Length = 328 Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 187/275 (68%), Gaps = 11/275 (4%) Query: 86 QETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 Q+ D R IKL VE + ++LS E D A L+V+AGAGGTESQDWA+ML+RMY RW Sbjct: 46 QDVDDAYARAIKL-VEDLELRNMLSAEEDRLGAVLKVNAGAGGTESQDWASMLVRMYQRW 104 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AE+ +K DG++AG+K+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R T Sbjct: 105 AERSGYKVTITNWQDGDDAGVKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMT 164 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI--------THIP 256 SF+S++V P+VDDSIE+E++ + DT+R+SGAGGQ+VN ++ VR+ T +P Sbjct: 165 SFASVFVVPLVDDSIEVEVNPALLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGVP 224 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 +V++ + RSQ +N+ A +LR++LY+ EL++R N E++K +I WG QIRSYV Sbjct: 225 EEIVIENTETRSQLENRENALRLLRSQLYDKELERRRAAQNEVEANKKKIEWGSQIRSYV 284 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RT + + + V+DGD+D F+KA L Sbjct: 285 FDD-RRVKDHRTGYQTSDVNGVMDGDIDAFIKAYL 318 >gi|211938843|pdb|2JL5|Y Chain Y, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File Contains The 30s Subunit. gi|211938901|pdb|2JL7|Y Chain Y, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File Contains The 30s Subunit. gi|237823553|pdb|2WH1|Y Chain Y, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823612|pdb|2WH3|Y Chain Y, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome). This File Contains The 30s Subunit Length = 351 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 156/349 (44%), Positives = 210/349 (60%), Gaps = 5/349 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++L L G D RL L + EDP LW + A+ + +E L + + + Sbjct: 1 LAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L L+E E+ ++ E + + KL+ Y Q +LL+ +A L + Sbjct: 61 ESDLQGLLELMEELPAEEREALKPELEEAAK--KLDELYHQ--TLLNFPHAEKNAILTIQ 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L Sbjct: 117 PGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLS 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ Sbjct: 177 PEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQG 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE Sbjct: 237 VNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGE 296 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIRSYVL VKD RT + + P +VLDGDL D + A L Sbjct: 297 VEPIEWGSQIRSYVLD-KNYVKDHRTGLMRHDPENVLDGDLMDLIWAGL 344 >gi|295982099|pdb|2X9R|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982158|pdb|2X9T|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release Length = 351 Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 156/349 (44%), Positives = 210/349 (60%), Gaps = 5/349 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++L L G D RL L + EDP LW + A+ + +E L + + + Sbjct: 1 LAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L L+E E+ ++ E + + KL+ Y Q +LL+ +A L + Sbjct: 61 ESDLQGLLELMEELPAEEREALKPELEEAAK--KLDELYHQ--TLLNFPHAEKNAILTIQ 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L Sbjct: 117 PGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLS 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ Sbjct: 177 PEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQG 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE Sbjct: 237 VNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGE 296 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIRSYVL VKD RT + + P +VLDGDL D + A L Sbjct: 297 VRPIEWGSQIRSYVLD-KNYVKDHRTGLMRHDPENVLDGDLMDLIWAGL 344 >gi|297623932|ref|YP_003705366.1| hypothetical protein Trad_1705 [Truepera radiovictrix DSM 17093] gi|297165112|gb|ADI14823.1| conserved hypothetical protein [Truepera radiovictrix DSM 17093] Length = 377 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 149/351 (42%), Positives = 204/351 (58%), Gaps = 9/351 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++ QL+ L G D RL+ L + DP LW + A+ L +E L + Sbjct: 14 EMTAQLHALRGYLDLARKEARLAELEPQLSDPKLWDDPEAARTLTQEAARLRRVLETFHR 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L L ELA ++ L+ LQR L+ Y+ E+L SG D A L + Sbjct: 74 LEGDLEGLRELQELATTPEEQQDLEAERAALQRT-LDALYR--ETLFSGPHDDRAAILTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI--HDGEEAGIKSATLLIKGPNAYG 179 GAGGTES DWA ML RMY R+AE++ F+ E L+ D GI A L+I+G AYG Sbjct: 131 KPGAGGTESSDWAGMLWRMYRRFAERQGFEVELLDATPSDAAPNGIDYAQLIIRGERAYG 190 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L+ E GVHRLVR+SP+D+ RRHTSF+S+ V P +DD++EI I D R+D YR+SG G Sbjct: 191 LLQVESGVHRLVRVSPFDAQGRRHTSFASVEVMPEIDDAVEITIDPKDVRVDVYRSSGPG 250 Query: 240 GQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GQ VNTTDSAVR+ + P +VV CQ +SQ KN+ +A +LR++L+E E ++R E Sbjct: 251 GQSVNTTDSAVRVVYKGGTPEEIVVTCQDGKSQIKNREKAMTVLRSRLFEREERRRLEEQ 310 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + I WG QIRSYVL + VKD RT + P DVLDGD++ + Sbjct: 311 MRARGEQKAIEWGSQIRSYVLD-KRYVKDHRTGEMRHDPDDVLDGDIEGLI 360 >gi|154490399|ref|ZP_02030660.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC 43184] gi|154089010|gb|EDN88054.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC 43184] Length = 322 Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 129/262 (49%), Positives = 180/262 (68%), Gaps = 11/262 (4%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 VE +F ++L EAD L++++GAGGTESQDWA+MLLRMYTRWAE +K Sbjct: 52 VESLEFRNMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+EAGIK+ATL I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDD+ Sbjct: 112 EGDEAGIKTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDT 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270 IE++I ++ DT+R+ GAGGQ+VN +S VR+ + TG ++++ + R Q Sbjct: 172 IEVKIDQAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQP 231 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A LR+ LY+ ELQ R EE A + E+ K +I WG QIRSYV + VKD RTN Sbjct: 232 KNRENAMRQLRSILYDKELQHRMEEQAKV-EAGKKKIEWGSQIRSYVFDD-RRVKDHRTN 289 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 + + + V+DG +DDF+KA L Sbjct: 290 FQTSDVNGVMDGKIDDFIKAYL 311 >gi|218131879|ref|ZP_03460683.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697] gi|317474512|ref|ZP_07933786.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA] gi|217986182|gb|EEC52521.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697] gi|316909193|gb|EFV30873.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA] Length = 372 Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 136/332 (40%), Positives = 207/332 (62%), Gaps = 13/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + L IS E+ R+ + + L +D+ +E Sbjct: 36 RTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV--RILADELQLAFDFYKDELVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + VE + +++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE Sbjct: 94 DEAYAKASAAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +G+EAGIK+ T+ I G AYG+LKGE GVHRLVR+SPY++ +R TSF+S Sbjct: 154 GYKATIANLQEGDEAGIKACTIEIAGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260 ++V P+VDD+IE+ I+ ++ DT+R+SGAGGQ+VN +S VR+ + TG ++ Sbjct: 214 VFVTPLVDDTIEVNINVANISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319 ++ + R Q KN+ A LR+ LY+ ELQ R E A + E+ K +I WG QIRSYV Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 333 -RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYL 363 >gi|319900327|ref|YP_004160055.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides helcogenes P 36-108] gi|319415358|gb|ADV42469.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides helcogenes P 36-108] Length = 371 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 137/332 (41%), Positives = 207/332 (62%), Gaps = 13/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W++ A+ M++ + L IS ++ L D + L +D+ +E Sbjct: 36 RTQAPGFWEDQKAAEAQMKKVKGLQQWISGYNGVK-TLTDE-VQLAFDFYKDELVSEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + VE + +++L EAD D L++++GAGGTESQDWANML+RMY R+AE Sbjct: 94 DEAFAKASAAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWANMLMRMYLRYAETH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +G+EAGIK+ T+ I G AYG+LKGE GVHRLVR+SPY++ +R TSF+S Sbjct: 154 GYKAAIANLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260 ++V P+VDD+IE++I ++ DT+R+SGAGGQ+VN +S VR+ + TG ++ Sbjct: 214 VFVTPLVDDTIEVDIKVANISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319 ++ + R Q KN+ A LR+ LY+ ELQ R E A + E+ K +I WG QIRSYV Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 333 -RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363 >gi|218259544|ref|ZP_03475251.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii DSM 18315] gi|218225027|gb|EEC97677.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii DSM 18315] Length = 322 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 129/262 (49%), Positives = 180/262 (68%), Gaps = 11/262 (4%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 VE +F ++L EAD L++++GAGGTESQDWA+MLLRMYTRWAE +K Sbjct: 52 VESLEFRNMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+EAGIK+ATL I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDD+ Sbjct: 112 EGDEAGIKTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDT 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270 IE++I ++ DT+R+ GAGGQ+VN +S VR+ + TG ++++ + R Q Sbjct: 172 IEVKIDQAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQP 231 Query: 271 KNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A LR+ LY+ ELQ R EE A + E+ K +I WG QIRSYV + VKD RTN Sbjct: 232 KNRENAMRQLRSILYDKELQHRMEEQAKV-EAGKKKIEWGSQIRSYVFDD-RRVKDHRTN 289 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 + + + V+DG +DDF+KA L Sbjct: 290 YQTSDVNGVMDGKIDDFIKAYL 311 >gi|188995108|ref|YP_001929360.1| putative peptide chain release factor RF-2 [Porphyromonas gingivalis ATCC 33277] gi|188594788|dbj|BAG33763.1| putative peptide chain release factor RF-2 [Porphyromonas gingivalis ATCC 33277] Length = 319 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 123/261 (47%), Positives = 182/261 (69%), Gaps = 9/261 (3%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E + +++L E D A L+V+AGAGGTESQDWA+ML+RMY RWA+K+ ++ Sbjct: 52 IEEVELKNMLRSEEDHFGAVLKVNAGAGGTESQDWASMLVRMYQRWADKQGYQVTITNWQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 DG+EAGIK+ T+ ++G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDDS Sbjct: 112 DGDEAGIKTVTMQVEGNLAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDS 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270 IEIEI+ + DT+R+ GAGGQ+VN ++ VR+ + TG +V++ + R+Q+ Sbjct: 172 IEIEINAAGISWDTFRSGGAGGQNVNKVETGVRLHYKYKDPETGEDKEIVIENTESRTQY 231 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ A +LR++LYE+ELQ+R E+ K +I WG QIRSYV + VKD RTN Sbjct: 232 DNRENAMRLLRSQLYEMELQRRRAAEAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNY 290 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 + ++ + V+DGD+D+F+KA L Sbjct: 291 QTSNVNAVMDGDIDEFIKAYL 311 >gi|308804958|ref|XP_003079791.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri] gi|116058248|emb|CAL53437.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri] Length = 419 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 132/337 (39%), Positives = 211/337 (62%), Gaps = 10/337 (2%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCDNLILLELAL 77 R L+ ++ LW++ +A+++M E R+ LD A +F + + D L L E+ Sbjct: 76 RFESLDERSSAGDLWEDANKARVVMAELAGVREELDAARAFEEHVSDAKT-ALELAEVGE 134 Query: 78 EEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 +++ S +L E +++ + +E + LL G+ D+ A ++++AGAGG ++QDW M Sbjct: 135 SDNEMSEMLCEAMASVEALDEALEQWELRRLLGGKYDALGAVVQIYAGAGGLDAQDWTEM 194 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY W EKR + E +GE G+K+ATL + G +AYG+L E+G HRLVR SP+ Sbjct: 195 LERMYIGWCEKRGYGVRVTERQEGEGGGLKTATLEVDGRHAYGYLSSEKGTHRLVRQSPF 254 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 + ++ R TSF+++ V P++ D E+++ E D I T R+SGAGGQ+VN ++AVRI H+P Sbjct: 255 NKDAARQTSFAAVDVIPLLQDEDEVKVPEGDLEITTMRSSGAGGQNVNKLETAVRIKHVP 314 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRS 314 TG+ V+ ++ R+Q N+ A ++AKL L + R +IA + G+ K E WG+QIR+ Sbjct: 315 TGISVKAEEHRTQALNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAE--WGQQIRN 372 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVL PY+MVKD+RT +E + + VL+G LD++M L Sbjct: 373 YVLHPYKMVKDVRTGVETSDVTRVLNGGLDEYMNGYL 409 >gi|258648792|ref|ZP_05736261.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259] gi|260851127|gb|EEX70996.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259] Length = 371 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 134/333 (40%), Positives = 207/333 (62%), Gaps = 15/333 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86 +T+ P W + A+ M++ + ++ + ++ C + LE A E +D+ + Sbjct: 36 RTQAPDFWDDPKRAEEQMKKVKGIEKWVIDYNDV----CLLVGELETAFEFYKDELVTEE 91 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + Q+ +E + ++L GE DS DA L++++GAGGTESQDWA+ML+RMY R+AE Sbjct: 92 EVDADYQKAIDAIEALELRNMLRGEEDSMDAVLKINSGAGGTESQDWASMLMRMYLRYAE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +KT + DG+EAGIK+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R TSF Sbjct: 152 AQGYKTRISNLQDGDEAGIKTVTIEIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSF 211 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG---- 258 +S++V P+VDD+IE+ + S D +R+ GAGGQ+VN ++ VR+ T TG Sbjct: 212 ASVFVTPLVDDNIEVYVDPSKISWDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGETEE 271 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 ++++ + R Q +N+ A +LR++LY+ LQKR E+ K +I WG QIRSYV Sbjct: 272 ILIENTESRKQLENRENAMRLLRSQLYDRALQKRRAAQAKIEAGKKKIEWGSQIRSYVFD 331 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG LD F+KA L Sbjct: 332 D-RRVKDHRTNFQTSDVNGVMDGKLDGFIKAYL 363 >gi|160891387|ref|ZP_02072390.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492] gi|270295480|ref|ZP_06201681.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317478476|ref|ZP_07937636.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36] gi|156858794|gb|EDO52225.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492] gi|270274727|gb|EFA20588.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316905365|gb|EFV27159.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36] Length = 371 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 137/332 (41%), Positives = 205/332 (61%), Gaps = 13/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + L IS E++ L D + L +D+ +E Sbjct: 36 RTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEVK-TLTDE-VQLAFDFYKDELVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 D + VE + +++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE Sbjct: 94 DDAYAKAITAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +G+EAGIK+ T+ I G AYG+LKGE GVHRLVR+SPY++ +R TSF+S Sbjct: 154 GYKATIANLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260 ++V P+VDD+IE+ I + DT+R+ GAGGQ+VN +S VR+ + TG ++ Sbjct: 214 VFVTPLVDDTIEVNIEPARMSWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEIL 273 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319 ++ + R Q KN+ A +LR+ LY+ ELQ R E A + E+ K +I WG QIRSYV Sbjct: 274 IENTETRDQPKNRENALRLLRSMLYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 333 -RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363 >gi|313157406|gb|EFR56829.1| putative peptide chain release factor 2 [Alistipes sp. HGB5] Length = 370 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 138/345 (40%), Positives = 213/345 (61%), Gaps = 21/345 (6%) Query: 21 QRLSFLNT--KTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCDNLILLE 74 +R+ LN KT+ P W N +A+ +R + +D+ + K+++D L L+ Sbjct: 26 KRIDLLNEEEKTQVPDFWDNPDQAREQLRRVAAIKAWVDDYDAVAKDVED-----LALMP 80 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++E S QE + + +E + ++L + D A L+++AGAGGTE+ DWA Sbjct: 81 EFVKEGVVS-EQEMDAHYAQTLERIEKLEMRNMLRRDEDKLGAILDINAGAGGTEALDWA 139 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +MLLRMYTRW E +K + L+ G+E G+KS TL +G AYG+LK E GVHR+VR+S Sbjct: 140 SMLLRMYTRWGEAHGYKVKVLDYQAGDEVGVKSCTLEFEGEYAYGYLKSENGVHRMVRLS 199 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++N++R T+F+S++V P VDD+IE+ ++ SD DT+RASGAGGQ+VN ++AVR+ + Sbjct: 200 PFNANNKRQTTFASVFVSPAVDDTIEVTVNPSDIEWDTFRASGAGGQNVNKVETAVRLRY 259 Query: 255 ----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 TG +++ + RSQ N+ A +L++KLY+ EL KR E+SK +I Sbjct: 260 HGKDADTGEAVEFLIENMETRSQLMNRENAMRILKSKLYQRELDKRMATQQALEASKKKI 319 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV + VKD RT ++ ++ V+DG LD+F+KA L Sbjct: 320 EWGSQIRSYVFDD-RRVKDHRTGVQTSAVEAVMDGGLDEFIKAYL 363 >gi|329956010|ref|ZP_08296781.1| putative peptide chain release factor 2 [Bacteroides clarus YIT 12056] gi|328524769|gb|EGF51823.1| putative peptide chain release factor 2 [Bacteroides clarus YIT 12056] Length = 372 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 135/332 (40%), Positives = 206/332 (62%), Gaps = 13/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + L IS E+ ++ + + L +D+ +E Sbjct: 36 RTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV--KVMADELQLAFDFYKDELVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + VE + +++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE Sbjct: 94 DEAYAKASAAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +G+EAGIK+ T+ I G AYG+LKGE GVHRLVR+SPY++ +R TSF+S Sbjct: 154 GYKATIANLQEGDEAGIKACTIEIAGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260 ++V P+VDD+IE+ I ++ DT+R+SGAGGQ+VN +S VR+ + TG ++ Sbjct: 214 VFVTPLVDDTIEVNIEQARISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319 ++ + R Q KN+ A LR+ LY+ ELQ R E A + E+ K +I WG QIRSYV Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 333 -RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYL 363 >gi|167764194|ref|ZP_02436321.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC 43183] gi|167698310|gb|EDS14889.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC 43183] Length = 372 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 138/332 (41%), Positives = 206/332 (62%), Gaps = 13/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + L IS E++ L D L L +D+ +E Sbjct: 36 RTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEVK-VLADEL-QLAFDFYKDELVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + VE + +++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE Sbjct: 94 DEAYAKASAAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +G+EAGIK+ T+ I G AYG+LKGE GVHRLVR+SPY++ +R TSF+S Sbjct: 154 GYKATISNLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260 ++V P+VDD+IE+ I ++ DT+R+SGAGGQ+VN +S VR+ + TG ++ Sbjct: 214 VFVTPLVDDTIEVNIEQARISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319 ++ + R Q KN+ A LR+ LY+ ELQ R E A + E+ K +I WG QIRSYV Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 333 -RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYL 363 >gi|330997843|ref|ZP_08321678.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila YIT 11841] gi|329569731|gb|EGG51496.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila YIT 11841] Length = 370 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 137/337 (40%), Positives = 205/337 (60%), Gaps = 23/337 (6%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL------ELALEEDDC 82 +T+ P W + A+ M++ + L I KE++ LCD L L E+ EE+ Sbjct: 36 RTQAPGFWDDAKAAEEQMKKVKGLQKWIDGYKEVK-TLCDELELAFDFYKEEMVTEEEVD 94 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 + T D L+ ++L ++L E D DA L++++GAGGTESQDWA+ML+RMY Sbjct: 95 GLYSRTVDALEDLELR-------NMLRQEEDPMDAVLKINSGAGGTESQDWASMLMRMYM 147 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAE +K DG+EAGIK+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R Sbjct: 148 RWAESHGYKCTISNYQDGDEAGIKTVTMQIEGEFAYGYLKSENGVHRLVRVSPYNAQGKR 207 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG 258 TSF+S++V P+VDDSIE+ + S D +R+ GAGGQ+VN ++ VR+ + TG Sbjct: 208 MTSFASVFVTPLVDDSIEVYVDPSRVSWDLFRSGGAGGQNVNKVETGVRLRYQYKDPDTG 267 Query: 259 ----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 ++++ + R Q +N+ A +L+++LY+ LQKR+ E+ K +I WG QIRS Sbjct: 268 EEEEILIENTESRKQLENRENAMRLLKSQLYDRALQKRKAKQAEIEAGKKKIEWGSQIRS 327 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YV + VKD RTN + + + V+DG LD F+K+ L Sbjct: 328 YVFDD-RRVKDHRTNYQTSDVNGVMDGKLDGFIKSYL 363 >gi|332881782|ref|ZP_08449430.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680421|gb|EGJ53370.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 370 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 137/337 (40%), Positives = 205/337 (60%), Gaps = 23/337 (6%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL------ELALEEDDC 82 +T+ P W + A+ M++ + L I KE++ LCD L L E+ EE+ Sbjct: 36 RTQAPGFWDDAKAAEEQMKKVKGLQKWIDGYKEVK-TLCDELELAFDFYKEEMVTEEEVD 94 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 + T D L+ ++L ++L E D DA L++++GAGGTESQDWA+ML+RMY Sbjct: 95 GLYGRTVDALEDLELR-------NMLRQEEDPMDAVLKINSGAGGTESQDWASMLMRMYM 147 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAE +K DG+EAGIK+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R Sbjct: 148 RWAESHGYKCTVSNYQDGDEAGIKTVTMQIEGEFAYGYLKSENGVHRLVRVSPYNAQGKR 207 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG 258 TSF+S++V P+VDDSIE+ + S D +R+ GAGGQ+VN ++ VR+ + TG Sbjct: 208 MTSFASVFVTPLVDDSIEVYVDPSRVSWDLFRSGGAGGQNVNKVETGVRLRYQYKDPDTG 267 Query: 259 ----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 ++++ + R Q +N+ A +L+++LY+ LQKR+ E+ K +I WG QIRS Sbjct: 268 EEEEILIENTESRKQLENRENAMRLLKSQLYDRALQKRKAKQAEIEAGKKKIEWGSQIRS 327 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YV + VKD RTN + + + V+DG LD F+K+ L Sbjct: 328 YVFDD-RRVKDHRTNYQTSDVNGVMDGKLDGFIKSYL 363 >gi|229496829|ref|ZP_04390538.1| peptide chain release factor 2, programmed [Porphyromonas endodontalis ATCC 35406] gi|229316240|gb|EEN82164.1| peptide chain release factor 2, programmed [Porphyromonas endodontalis ATCC 35406] Length = 318 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 128/275 (46%), Positives = 185/275 (67%), Gaps = 10/275 (3%) Query: 86 QETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 +E D +I L +E + ++L E D A L+V+AGAGGTESQDWA+ML+R+Y RW Sbjct: 38 EEEVDQAYQIALSLIENVELRNMLRREEDRLGAVLKVNAGAGGTESQDWASMLVRLYQRW 97 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AE +K DG+EAGIK+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R T Sbjct: 98 AENHDYKVTITNWQDGDEAGIKTVTMQIEGDLAYGFLKSENGVHRLVRVSPYNAQGKRMT 157 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG-- 258 SF+S++V P+VDDSIEI ++ ++ DT+R+SGAGGQ+VN ++ VR+ + TG Sbjct: 158 SFASVFVVPLVDDSIEIAVNPANLSWDTFRSSGAGGQNVNKVETGVRLHYQFKDPDTGEE 217 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 +V++ + RSQ N+ A +LR++LY++EL+KR E+ K +I WG QIRSYV Sbjct: 218 REIVIENTESRSQLDNRENALRLLRSQLYDIELEKRRAAQAEVEAGKKKIEWGSQIRSYV 277 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + ++ + V+DGD+DDF+KA L Sbjct: 278 FDD-RRVKDHRTNFQTSNVNAVMDGDIDDFIKAYL 311 >gi|189459974|ref|ZP_03008759.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136] gi|189433347|gb|EDV02332.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136] Length = 371 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 205/333 (61%), Gaps = 15/333 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86 +T+ P W + +A+ M++ + L I ++ L D L ELA + +D+ + Sbjct: 36 RTQAPGFWDDAKKAEAQMKKVKSLQGWIEGYNAVK-TLTDEL---ELAFDFYKDELVTEE 91 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + + +E + +++L EAD D L++++GAGGTESQDW++ML+RMY RWAE Sbjct: 92 EVDEAYAKSLQALEELELKNMLRSEADQMDCVLKINSGAGGTESQDWSSMLMRMYMRWAE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +K + +G+EAGIK+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF Sbjct: 152 SNGYKLSVANLQEGDEAGIKTVTMNIEGAYAYGYLKGENGVHRLVRVSPYNAQGKRMTSF 211 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG---- 258 +S++V P+VDDSIE+ + + DT+R+ GAGGQ+VN +S VR+ + TG Sbjct: 212 ASVFVTPLVDDSIEVVVEPARLSWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEE 271 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 ++++ + R Q KNK A LR+ LY+ ELQ R E E+ K +I WG QIRSYV Sbjct: 272 ILIENTETRDQPKNKENAMRQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFD 331 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 332 D-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 363 >gi|330840796|ref|XP_003292395.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum] gi|325077351|gb|EGC31069.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum] Length = 330 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 126/320 (39%), Positives = 192/320 (60%), Gaps = 17/320 (5%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 ++E L I + + D ++E++ +E D +L E+ + L + + Sbjct: 18 IKEYNSLKAVIDEFNSLNNSFKDYQEIVEMSKKEGDQEMLNESRNLLNSLYSICTDLEIN 77 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 L+ GE D N ++EVHAG GG +S DW ++ +MY WAE++ F+ +E GE G+ Sbjct: 78 VLMIGEEDDNSCFIEVHAGVGGADSMDWTEIIHKMYINWAERKGFQVSIIESIPGE-FGL 136 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 + ATL I G NAYGWL+ E G+H+L+RISP+ + +RHTSF+S+ VYP D+SI +++ Sbjct: 137 RRATLKIDGKNAYGWLRTEMGIHKLIRISPFSPDFKRHTSFASVVVYPSSDNSINVDLKP 196 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D +I+ R+SGAGGQHVNTT+SAVRI HIPT + V C ERSQH+NKA ++L+ K++ Sbjct: 197 NDLKIEFTRSSGAGGQHVNTTESAVRIVHIPTNISVFCSSERSQHQNKAIGLDLLKTKIF 256 Query: 286 --------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 E E + R+E+ G +S G +RSY + P + VKD RT E + S Sbjct: 257 RHYLSIKNEKEKKFRDELGTNGFAS------GNIVRSYTMHPQERVKDQRTGFETSQLSK 310 Query: 338 VLDGD--LDDFMKATLAIKK 355 +L+GD LD +K L++ + Sbjct: 311 ILEGDEELDKMIKLALSVSQ 330 >gi|303233066|ref|ZP_07319741.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4] gi|302480841|gb|EFL43926.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4] Length = 420 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 116/240 (48%), Positives = 159/240 (66%), Gaps = 1/240 (0%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D DA + + G GG E+QDW MLL+MY ++ E++ ++ + E GI AT + Sbjct: 173 DQGDAIVTIKPGQGGLEAQDWCAMLLKMYCKYCERKSWRVTINDCPQAEVIGIDRATFTV 232 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E GVHRLVRISP D+ RR T+F+ + V PV+ + ++EI+ D R+D Sbjct: 233 HGVRAYGMLKAEAGVHRLVRISPTDAKHRRQTTFAGVEVIPVLPEETDVEINPQDVRVDV 292 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + ASG GGQ VNTTDSAVR+TH+P+G+VV CQ ERSQ +NKA A +L+A+LYEL+ Q+R Sbjct: 293 FHASGPGGQGVNTTDSAVRLTHMPSGIVVSCQNERSQLQNKAAAMEILKARLYELQRQQR 352 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATL 351 N + T I WG QIR+Y+L P+Q+VKD RT +E + VL +G+LD F+ A L Sbjct: 353 ATQLNDLKGLTTTISWGNQIRNYILYPFQLVKDTRTQVETGNVDAVLQEGNLDPFIIAYL 412 >gi|291515566|emb|CBK64776.1| bacterial peptide chain release factor 2 (bRF-2) [Alistipes shahii WAL 8301] Length = 370 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 135/332 (40%), Positives = 209/332 (62%), Gaps = 13/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 KT++P+ W N +A+ +R+ + + I+ + ++L L+ ++E S +E Sbjct: 36 KTQEPNFWDNPDKAREQLRKVAGIKAWVEDYDAIR-KDAEDLQLMPDFVKEGVVS--EEE 92 Query: 89 SDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 D LE +E + ++L + D A L+++AGAGGTE+ DWA+ML+RMYTRW E Sbjct: 93 MDAHYAATLEKIEKLEMRNMLRRDEDKLGAILDINAGAGGTEALDWASMLMRMYTRWGEA 152 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K + L+ G+E G+KS TL +G AYG+LK E GVHR+VR+SP+++N++R T+F+ Sbjct: 153 HGYKVKVLDFQAGDEVGVKSCTLEFEGEYAYGYLKSENGVHRMVRLSPFNANNKRQTTFA 212 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259 S++V P VDD+IEI ++ +D DT+R+SGAGGQ+VN ++AVR+ + TG Sbjct: 213 SVFVSPAVDDTIEITVNAADIEWDTFRSSGAGGQNVNKVETAVRLRYHAKDPDTGEAIEY 272 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 +++ + RSQ N+ A +LR+KLY+ EL KR E+SK +I WG QIRSYV Sbjct: 273 LIENMETRSQLMNRENAMRILRSKLYQRELDKRMATQQALEASKKKIEWGSQIRSYVFDD 332 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RT ++ ++ V+DGDLD F+KA L Sbjct: 333 -RRVKDHRTGVQTSAVESVMDGDLDAFIKAYL 363 >gi|224536533|ref|ZP_03677072.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus DSM 14838] gi|224521789|gb|EEF90894.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus DSM 14838] Length = 371 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 134/331 (40%), Positives = 205/331 (61%), Gaps = 11/331 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + L I+ EI+ L D L L +D+ +E Sbjct: 36 RTQAPGFWDDQKTAEAQMKKVKGLQQWIAGYNEIK-TLSDEL-QLAFDFYKDELVTEEEI 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + + ++ + +++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE Sbjct: 94 DEAYAKASVAIDELELKNMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETN 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +G+EAGIK+ T+ I G AYG+LKGE GVHRLVR+SPY++ +R TSF+S Sbjct: 154 GYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260 ++V P+VDD+IE+ I+ ++ DT+R+SGAGGQ+VN +S VR+ + TG ++ Sbjct: 214 VFVTPLVDDTIEVNINVANISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 ++ + R Q KN+ A LR+ LY+ ELQ R E+ K +I WG QIRSYV Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD- 332 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 333 RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363 >gi|282880596|ref|ZP_06289302.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS 5C-B1] gi|281305491|gb|EFA97545.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS 5C-B1] Length = 374 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 135/334 (40%), Positives = 211/334 (63%), Gaps = 16/334 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86 +T+ P W++ A+ M + + ++ + ++++ ++ D L +LA E DD + Sbjct: 36 RTQAPDFWEDPQRAQEQMIKVKGIEKWLKGYEQVR-QMADEL---QLAYEFYRDDMVTEE 91 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + + +E + +++L + D D +++++GAGGTESQDWA ML+RMY RWAE Sbjct: 92 ELDHDYAKAIAAIEDLELKNMLRQKEDPMDCVMKINSGAGGTESQDWAQMLMRMYMRWAE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 +K +I DGEEAGIKS T+ I+G AYG+LK E GVHRLVR+SP+++ +R TS Sbjct: 152 AHDYKCTVSDIQDGEEAGIKSVTMKIEGNEYAYGFLKSENGVHRLVRVSPFNAQGKRMTS 211 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---HIP-TG--- 258 F+S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ H P TG Sbjct: 212 FASVFVSPLVDDTIEVFVDPACVSWDTFRSSGAGGQNVNKVESGVRLRYQYHDPDTGEEE 271 Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 ++++ + R Q KN+A+A +L+++LY+ ++KR E E+ K +I WG QIRSYV Sbjct: 272 EILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVF 331 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + T V+DG +DDF+KA L Sbjct: 332 DD-RRVKDHRTNFQTTDVDGVMDGKIDDFIKAYL 364 >gi|329964588|ref|ZP_08301642.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT 12057] gi|328524988|gb|EGF52040.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT 12057] Length = 371 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 137/332 (41%), Positives = 207/332 (62%), Gaps = 13/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + L IS E++ L + L L +D+ +E Sbjct: 36 RTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEVK-TLAEEL-QLSFDFYKDELVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + VE + +++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE Sbjct: 94 DEAYVKASAAVEALELKNMLREEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETY 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +G+EAGIK+ T+ I G AYG+LKGE GVHRLVR+SPY++ +R TSF+S Sbjct: 154 GYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260 ++V P+VDD+IE+ I+ ++ DT+R+SGAGGQ+VN +S VR+ + TG ++ Sbjct: 214 VFVTPLVDDTIEVNINVANISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQP 319 ++ + R Q KN+ A LR+ LY+ ELQ R E A + E+ K +I WG QIRSYV Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKKKIEWGSQIRSYVFDD 332 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 333 -RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 363 >gi|313886616|ref|ZP_07820328.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923912|gb|EFR34709.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas asaccharolytica PR426713P-I] Length = 328 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 130/275 (47%), Positives = 185/275 (67%), Gaps = 11/275 (4%) Query: 86 QETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 Q+ D R IKL VE + ++LS E D A L+++AGAGGTESQDWA+ML+RMY RW Sbjct: 46 QDVDDAYARAIKL-VEDLELRNMLSAEEDRLGAVLKINAGAGGTESQDWASMLVRMYQRW 104 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AE+ +K DG++AGIK+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R T Sbjct: 105 AERSGYKVTITNWQDGDDAGIKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMT 164 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG-- 258 SF+S++V P+VDDSIE+E++ DT+R+SGAGGQ+VN ++ VR+ T TG Sbjct: 165 SFASVFVVPLVDDSIEVEVNPGLLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGET 224 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 +V++ + RSQ N+ A +LR++LY+ EL++R + E++K +I WG QIRSYV Sbjct: 225 EEIVIENTETRSQMDNRENALRLLRSQLYDKELERRRAAQSEVEANKKKIEWGSQIRSYV 284 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RT + + + V+DGDLD F+KA L Sbjct: 285 FDD-RRVKDHRTGYQTSDVNGVMDGDLDAFIKAYL 318 >gi|294675125|ref|YP_003575741.1| peptide chain release factor 2 [Prevotella ruminicola 23] gi|294472270|gb|ADE81659.1| peptide chain release factor 2 [Prevotella ruminicola 23] Length = 374 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 132/334 (39%), Positives = 209/334 (62%), Gaps = 12/334 (3%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + +T+ P W++ A+ M++ + + + KE++ L D L L +D+ + Sbjct: 34 DLRTQAPDFWEDRKRAEEQMKKVKGIKKWLDGYKEVR-TLADEL-QLAFDFFKDEMVTEE 91 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E D + +E + +++L + D +A L++++GAGGTE+QDWA+ML+RMY RWAE Sbjct: 92 EVEDTYAKAIKAIEDLELKNMLRQKEDPMEAVLKINSGAGGTEAQDWASMLMRMYMRWAE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 +K + DG+EAGIKS T+ ++G + AYG+LK E GVHRLVR+SP+++ +R TS Sbjct: 152 AHGYKVTISNLLDGDEAGIKSVTMQLEGGDYAYGYLKSENGVHRLVRVSPFNAQGKRMTS 211 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG--- 258 F+S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ T TG Sbjct: 212 FASVFVSPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNVNKVESGVRLRYWYTDPDTGEEE 271 Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 ++++ + R Q KNK +A +L+++LY+ ++KR E E+ K +I WG QIRSYV Sbjct: 272 EILIENTETRDQPKNKERAMTLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVF 331 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + T V+DG +DDF+KA L Sbjct: 332 DD-RRVKDHRTNYQTTDVDGVMDGKIDDFIKAYL 364 >gi|298706071|emb|CBJ29181.1| peptide chain release factor [Ectocarpus siliculosus] Length = 789 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 132/347 (38%), Positives = 205/347 (59%), Gaps = 9/347 (2%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD L +L + + W + A+ + + L + + + D + Sbjct: 107 LFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLHRWRGWEADAETV 166 Query: 73 LELALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +EL EE+ ++L E + LQ ++ +++ + + LLSG+ D+ L + AGAGG Sbjct: 167 IELCGEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQLLSGKYDNCGCRLTIMAGAGG 226 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY R+ ++R FK + +E GE AGIKS + ++G AYG+L GE+G Sbjct: 227 TEAQDWAEMLQRMYIRFFQRRGFKYKMVEEESGEVAGIKSCEMQVEGDFAYGYLAGEKGT 286 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVV--DDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HRLVR SP+++ ++R TSF+ + +P++ DD ++ + E + + T R+ G+GGQ+VN Sbjct: 287 HRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEGELEVSTMRSGGSGGQNVNK 346 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKT 304 ++ VR+ HIPTG+ V+C QERSQ NK A NML+ KL ++ Q+ ++A I Sbjct: 347 VETGVRMKHIPTGIAVRCTQERSQMLNKELALNMLKEKLVVVMQEQQTRDLAEI-RGDMV 405 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E WG+QIR+YV PY++VKD RT E DV+DGDLD ++A L Sbjct: 406 EASWGQQIRNYVFHPYKLVKDTRTGAETVQVQDVMDGDLDALIEAYL 452 >gi|281425018|ref|ZP_06255931.1| peptide chain release factor 2 [Prevotella oris F0302] gi|281400862|gb|EFB31693.1| peptide chain release factor 2 [Prevotella oris F0302] Length = 378 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 209/333 (62%), Gaps = 14/333 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ MR+ + ++ + + +L D L L +D+ +E Sbjct: 36 RTQAPDFWDDPKRAEAQMRKVKGIEKWLKGYNACR-QLTDEL-QLAFDFYKDEMVSEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + VE + +++L E DS DA L++++GAGGTESQDWA ML+RMY RW+E Sbjct: 94 DADYAKAVKAVEDLELKNMLRQEEDSMDAVLKINSGAGGTESQDWAQMLMRMYQRWSESH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + + +I DG+EAGIKS T+ I+G + AYG+LK E GVHRLVR+SPY++ +R TSF+ Sbjct: 154 GYTVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259 S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + TG + Sbjct: 214 SVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEHEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQ 318 +++ + R Q KN+A+A +L+++LY+ L+KR+ E A I E+ K +I WG QIRSYV Sbjct: 274 LIENTETRDQPKNRAKAMLLLKSQLYDRALKKRQAEQAKI-EAGKKKIEWGSQIRSYVFD 332 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RT + + V+DG LD F+KA L Sbjct: 333 D-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYL 364 >gi|299142161|ref|ZP_07035294.1| peptide chain release factor 2, programmed [Prevotella oris C735] gi|298576250|gb|EFI48123.1| peptide chain release factor 2, programmed [Prevotella oris C735] Length = 378 Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 209/333 (62%), Gaps = 14/333 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ MR+ + ++ + + +L D L L +D+ +E Sbjct: 36 RTQAPDFWDDPKRAEAQMRKVKGIEKWLKGYDACR-QLTDEL-QLAFDFYKDEMVSEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + VE + +++L E DS DA L++++GAGGTESQDWA ML+RMY RW+E Sbjct: 94 DADYAKAVKAVEDLELKNMLRQEEDSMDAVLKINSGAGGTESQDWAQMLMRMYQRWSESH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + + +I DG+EAGIKS T+ I+G + AYG+LK E GVHRLVR+SPY++ +R TSF+ Sbjct: 154 GYTVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259 S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + TG + Sbjct: 214 SVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEHEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSYVLQ 318 +++ + R Q KN+A+A +L+++LY+ L+KR+ E A I E+ K +I WG QIRSYV Sbjct: 274 LIENTETRDQPKNRAKAMLLLKSQLYDRALKKRQAEQAKI-EAGKKKIEWGSQIRSYVFD 332 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RT + + V+DG LD F+KA L Sbjct: 333 D-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYL 364 >gi|167752837|ref|ZP_02424964.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216] gi|167659906|gb|EDS04036.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216] Length = 315 Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 125/304 (41%), Positives = 189/304 (62%), Gaps = 17/304 (5%) Query: 57 SFIKEIQD-RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + +KE++D RL + + E QE + R +E + ++L + D Sbjct: 13 AVVKEVEDLRLMPEFVKEGVVTE-------QELDEQYARAMHRIEELELRNMLRRDEDRM 65 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 A +++++GAGGTE+ DWA MLLRMYTRW E +K + L+ GEE G+KS TL +G Sbjct: 66 GAIMDINSGAGGTEALDWAGMLLRMYTRWGEAHGYKVKVLDYQAGEEVGVKSCTLEFEGE 125 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG+LK E GVHR+VR+SP+++N++R T+F+S++V P +DD+IEI ++ +D DT+R+ Sbjct: 126 YAYGYLKSENGVHRMVRLSPFNANNKRQTTFASVFVSPAIDDTIEITVNPADIEWDTFRS 185 Query: 236 SGAGGQHVNTTDSAVRI--------THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 SGAGGQ+VN ++AVR+ T P +++ + RSQ N+ A +L++KLY+ Sbjct: 186 SGAGGQNVNKVETAVRLRYHGKDADTGEPIEYLIENMETRSQLMNRENAMRILKSKLYQR 245 Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 EL KR E++K I WG QIRSYV + VKD RT ++ + V+DGDLD+F+ Sbjct: 246 ELDKRMATQQALEATKKRIEWGSQIRSYVFDD-RRVKDHRTGVQTSDVEGVMDGDLDEFI 304 Query: 348 KATL 351 KA L Sbjct: 305 KAYL 308 >gi|189464495|ref|ZP_03013280.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM 17393] gi|189438285|gb|EDV07270.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM 17393] Length = 371 Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 131/331 (39%), Positives = 202/331 (61%), Gaps = 11/331 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + L I+ EI + + L +D+ +E Sbjct: 36 RTQAPGFWDDQKAAEAQMKKVKGLQQWIAGYNEI--KTLSEELQLAFDFYKDELVTEEEI 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + ++ + +++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE Sbjct: 94 DEAYAKASTAIDELELKNMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETN 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +G+EAGIK+ T+ I G AYG+LKGE GVHRLVR+SPY++ +R TSF+S Sbjct: 154 GYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 213 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VV 260 ++V P+VDD+IE+ I+ ++ DT+R+SGAGGQ+VN +S VR+ + TG ++ Sbjct: 214 VFVTPLVDDTIEVNINVANISWDTFRSSGAGGQNVNKVESGVRLRYQFKDPYTGEEEEIL 273 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 ++ + R Q KN+ A LR+ LY+ ELQ R E+ K +I WG QIRSYV Sbjct: 274 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD- 332 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG +D F+KA L Sbjct: 333 RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYL 363 >gi|253571104|ref|ZP_04848511.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251839057|gb|EES67141.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 354 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 140/354 (39%), Positives = 214/354 (60%), Gaps = 21/354 (5%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKM-LMRERQHLDNAISFIKEIQDRL- 66 GG+FD D ++ +T+ P W Q EA+M L+++ Q + + +K + D L Sbjct: 1 GGIFDIDGKKIQVEEEQLRTQAPGFWDDQKKAEAQMKLVKDLQKWIDGYNEVKTLADELE 60 Query: 67 -CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + EL E D + + S+ ++ ++L+ ++L EAD L++++GA Sbjct: 61 LSFDFYKEELVTEGDVDAAYAKASEAVEALELK-------NMLRDEADQMACVLKINSGA 113 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTESQDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I+G AYG+LKGE Sbjct: 114 GGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGEN 173 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ I + DT+R+ GAGGQ+VN Sbjct: 174 GVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNK 233 Query: 246 TDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 +S VR+ + TG ++++ + R Q KN+ A LR+ LY+ ELQ R Sbjct: 234 VESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQA 293 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +++F+KA L Sbjct: 294 KVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIEEFIKAYL 346 >gi|300726271|ref|ZP_07059724.1| peptide chain release factor 2 [Prevotella bryantii B14] gi|299776468|gb|EFI73025.1| peptide chain release factor 2 [Prevotella bryantii B14] Length = 376 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 131/334 (39%), Positives = 209/334 (62%), Gaps = 16/334 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86 +T+ P W + A+ M++ + + + KE++ + D L +LA E +D+ + Sbjct: 36 RTQAPDFWDDPKYAQEQMKKVKEIQKWLDGYKEVR-QYADEL---QLAFEFYKDEMVTEE 91 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E D+ + +E + +++L E DS DA L++++GAGGTESQDWA+ML+RMY RW E Sbjct: 92 EVDDDYAKAIKAIENLELKNMLRQEEDSMDAVLKINSGAGGTESQDWASMLMRMYMRWCE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + + + DG+EAGIKS + I+G AYG+LK E GVHRLVR+SPY++ +R TS Sbjct: 152 AHGYSVKITNMQDGDEAGIKSVEMTIEGGEFAYGFLKSENGVHRLVRVSPYNAQGKRMTS 211 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG--- 258 F+S++V P+VDD+IEI + + DT+R+ GAGGQ+VN +S VR+ + TG Sbjct: 212 FASVFVTPLVDDTIEIYVDPAKVSWDTFRSGGAGGQNVNKVESGVRLRYQYEDPDTGEHE 271 Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 ++++ + R Q KN+A+A +L+++LY+ L++++ E+ K +I WG QIRSYV Sbjct: 272 EILIENTETRDQPKNRAKAMLLLKSQLYDRALKRKQAEQAKVEAGKKKIEWGSQIRSYVF 331 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + V+DG LD+F+K+ L Sbjct: 332 DD-RRVKDHRTNYQTSDVDGVMDGKLDEFIKSYL 364 >gi|325190234|emb|CCA24711.1| peptide chain release factor putative [Albugo laibachii Nc14] Length = 372 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 120/286 (41%), Positives = 176/286 (61%), Gaps = 12/286 (4%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 W N A + + +++ + + + + + L L+ E D +++E + ++ Sbjct: 88 FWGNAANAIAISQRLSAMESQLQRVSAYRAQFLETKELYLLSEAEKDQEMMEECFETMES 147 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 I+ V+ E +LSG+ D +LE+ AGAGGT+SQDW ML +MY RWA+ +K+K + Sbjct: 148 IRKAVQTLSMELMLSGKDDRLPCFLEIQAGAGGTDSQDWVAMLSKMYERWAQHKKYKVQY 207 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ E G +S L I G AYGW+K E GVHRL+R+SPYD RRHTSF+ + VYP+ Sbjct: 208 VDGLRTELGGFRSVCLRIDGDLAYGWIKLEAGVHRLIRLSPYDQQKRRHTSFAQVRVYPI 267 Query: 215 --VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 + + +S D RIDT+RA+G GGQHVN+TDSAVRITH+P+G+VVQCQ ERSQH+N Sbjct: 268 EAAEATTRTAVSGKDLRIDTFRATGPGGQHVNSTDSAVRITHLPSGIVVQCQSERSQHRN 327 Query: 273 KAQAWNMLRAKLYELEL-----QKREEIANIGESSKTEIGWGRQIR 313 KAQA +L AKL E+ KR+ +G+++ WG Q+R Sbjct: 328 KAQAMEVLLAKLNNQEIAEQQSAKRQYAKGLGDNA-----WGNQVR 368 >gi|317504105|ref|ZP_07962107.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606] gi|315664777|gb|EFV04442.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606] Length = 376 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 133/336 (39%), Positives = 209/336 (62%), Gaps = 20/336 (5%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +T+ P W + A+ M++ + ++ + +E+ D L L +D+ Sbjct: 36 RTQAPDFWDDPKRAEAQMKKVKGIEKWLKGYNACRELADELQ-----LAFDFYKDNMVTE 90 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E + + VE + +++L E D+ DA L++++GAGGTESQDWA ML+RMY RW+ Sbjct: 91 EEVDTDYAKAVKAVEDLELKNMLRQEEDAMDAVLKINSGAGGTESQDWAQMLMRMYQRWS 150 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHT 204 E + + +I DG+EAGIKS T+ I+G + AYG+LK E GVHRLVR+SPY++ +R T Sbjct: 151 ESHGYNVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYLKSENGVHRLVRVSPYNAQGKRMT 210 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG-- 258 SF+S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + TG Sbjct: 211 SFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQ 270 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGWGRQIRSY 315 ++++ + R Q KN+A+A +L+++LY+ L+K++ E A I E+ K +I WG QIRSY Sbjct: 271 EEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKKQAEQAKI-EAGKKKIEWGSQIRSY 329 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V + VKD RT + + V+DG LD F+KA L Sbjct: 330 VFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYL 364 >gi|281421022|ref|ZP_06252021.1| peptide chain release factor 2 [Prevotella copri DSM 18205] gi|281404940|gb|EFB35620.1| peptide chain release factor 2 [Prevotella copri DSM 18205] Length = 375 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 128/332 (38%), Positives = 206/332 (62%), Gaps = 12/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W++ A+ M++ + + + K + RL + + L +D+ +E Sbjct: 36 RTQAPDFWEDPKYAQEQMKKVKGIQKWLDGYKTV--RLYADELQLAFDFYKDEMVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + +E + +++L + D D L++++GAGGTESQDWA ML+RMY RW+E Sbjct: 94 DADYAKAIKAIEDLELKNMLRQKEDPMDCVLKINSGAGGTESQDWAQMLMRMYMRWSEAH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K ++ +G+EAGIKS T+ I+G AYG+LK E GVHRLVR+SP+++ +R TSF+ Sbjct: 154 GYKVTITDMQEGDEAGIKSVTMTIEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG----V 259 S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ T TG + Sbjct: 214 SVFVTPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNVNKVESGVRLRYWYTDPDTGEEEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 +++ + R Q KN+A+A +L+++LY+ ++KR E E+ K +I WG QIRSYV Sbjct: 274 LIENTETRDQPKNRAKALLLLKSQLYDRAMKKRLEAKAKIEAGKKKIEWGSQIRSYVFDD 333 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + V+DG +DDF+KA L Sbjct: 334 -RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYL 364 >gi|282878031|ref|ZP_06286839.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC 35310] gi|281299866|gb|EFA92227.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC 35310] Length = 374 Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 132/334 (39%), Positives = 209/334 (62%), Gaps = 16/334 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86 +T+ P W++ A+ M + + ++ + ++++ +L D L ELA + D+ Sbjct: 36 RTQAPDFWEDPKRAQEQMIKVKGIEKWLVGYQQVR-QLADEL---ELAFDFYRDEMITED 91 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + + +E+ + +++L D D +++++GAGGTESQDWA ML+RMY RWAE Sbjct: 92 ELDADYAKAVAAIEHLEMKNMLRQTEDPMDCVMKINSGAGGTESQDWAQMLMRMYMRWAE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 +K +I DG+EAGIKS T+ I+G AYG+LK E GVHRLVR+SP+++ +R TS Sbjct: 152 AHDYKCTISDIQDGDEAGIKSVTMKIEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTS 211 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG--- 258 F+S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + TG Sbjct: 212 FASVFVSPLVDDTIEVFVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEEE 271 Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 ++++ + R Q KN+A+A +L+++LY+ ++KR E E+ K +I WG QIRSYV Sbjct: 272 EILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVF 331 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + T V+DG LD+F+KA L Sbjct: 332 DD-RRVKDHRTNYQTTDVDAVMDGKLDEFIKAYL 364 >gi|313147825|ref|ZP_07810018.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12] gi|313136592|gb|EFR53952.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12] Length = 337 Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 203/333 (60%), Gaps = 15/333 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86 +T+ P W + +A+ M+ + L I E++ L D L ELA + +D+ Q Sbjct: 2 RTQAPGFWDDQKKAEAQMKLVKGLQKWIDGYNEVK-TLADEL---ELAFDFYKDELVTEQ 57 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + + VE + +++L EAD L++++GAGGTESQDWA+ML+RMY R+AE Sbjct: 58 EVDEAYAKALEHVENLELQNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAE 117 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +K + +G+EAGIK+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF Sbjct: 118 TNGYKATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSF 177 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG---- 258 +S++V P+VDDSIE+ I + DT+R+ GAGGQ+VN +S VR+ + TG Sbjct: 178 ASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEE 237 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 ++++ + R Q KN+ A LR+ LY+ ELQ R E+ K +I WG QIRSYV Sbjct: 238 ILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFD 297 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + + V+DG ++ F+KA L Sbjct: 298 D-RRVKDHRTNFQTSDVNGVMDGKIEGFIKAYL 329 >gi|307128661|ref|YP_003880691.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI] gi|306483123|gb|ADM89993.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI] Length = 337 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 108/261 (41%), Positives = 177/261 (67%), Gaps = 3/261 (1%) Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E + L +IK + + + + + + +A +++ GAGGTES DW +ML RMYT WA Sbjct: 65 RELINKLNKIKNFINQIESQIIFTKKEYKLNAIIQITPGAGGTESCDWVSMLYRMYTMWA 124 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK + + L G+ G+K ++G + +G+LKGE GVHRLVRISP+D NS+RHTS Sbjct: 125 EKNNYSIKELYNLQGDVGGLKYILFEVQGFSPFGFLKGENGVHRLVRISPFD-NSKRHTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+++YP+++D I+I+I+ SD + T+R+ G+GGQ+VN ++ VR+ H PT ++++ + Sbjct: 184 FASVYIYPLINDDIKIKINNSDIKWSTFRSGGSGGQNVNKVETGVRLHHKPTNIIIENTE 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 RSQ KNK +A +L+++LY +E Q + I + K E WG QIR+Y++ PY++VKD Sbjct: 244 TRSQIKNKTKALKLLKSRLYYIEKQNKNIIRKKNKLKKIE--WGSQIRNYIMHPYKLVKD 301 Query: 326 LRTNIEKTSPSDVLDGDLDDF 346 L+T E ++ + V+DG+L++F Sbjct: 302 LKTGYETSNINSVMDGNLNNF 322 >gi|323343897|ref|ZP_08084124.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269] gi|323095716|gb|EFZ38290.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269] Length = 373 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 135/354 (38%), Positives = 212/354 (59%), Gaps = 14/354 (3%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + L D D + +T+ P W++ A+ M+ + ++ I KE+ R Sbjct: 15 DALHRYLDIDRKMVEFEEEQLRTQAPDFWEDPQRAQEQMKLVKGIEKWIKGYKEV--RQY 72 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + + L DD +E + + +E + +++L + D + L++++GAGG Sbjct: 73 ADELQLAFDFYHDDMVSEEEVDADYAKAIKAIEDLELKNMLRQQEDPMECVLKINSGAGG 132 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQG 186 TESQDWA ML+RMY RWAE +K + +G+EAGIKS T+ I+G AYG+LK E G Sbjct: 133 TESQDWAQMLMRMYMRWAEAHGYKVSISNLQEGDEAGIKSVTMEIEGGEYAYGFLKSENG 192 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+++ +R TSF+S++V P+VDDSIE+ + + DT+R+ GAGGQ+VN Sbjct: 193 VHRLVRVSPFNAQGKRMTSFASVFVSPLVDDSIEVFVDPARVSWDTFRSGGAGGQNVNKV 252 Query: 247 DSAVRITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIAN 297 +S VR+ ++ TG ++++ + R Q KN+A+A +L+++LY+ ++KR EE A Sbjct: 253 ESGVRLRYMYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEEQAK 312 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I E+ K +I WG QIRSYV + VKD RTN + + V+DG +DDF+KA L Sbjct: 313 I-EAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYL 364 >gi|333029659|ref|ZP_08457720.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011] gi|332740256|gb|EGJ70738.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011] Length = 370 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/290 (44%), Positives = 190/290 (65%), Gaps = 13/290 (4%) Query: 73 LELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LELA + +D+ +E + + +E + +++L EAD L++++GAGGTES Sbjct: 76 LELAFDFYKDELVSEEEVDAAYNKALVCIENLELKNMLRQEADQLGCILKINSGAGGTES 135 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML+R+Y RWAE +K + +G+EAGIK+ T+ ++G AYG+LKGE GVHRL Sbjct: 136 QDWASMLMRLYLRWAEDHNYKATLSNLQEGDEAGIKTCTIQVEGEYAYGYLKGENGVHRL 195 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR+SPY++ +R TSF+SI+V P+VD+SIE+ I S D +R+ GAGGQ+VN ++ V Sbjct: 196 VRVSPYNAQGKRMTSFASIFVTPLVDESIEVTIDPSAITWDLFRSGGAGGQNVNKVETGV 255 Query: 251 RITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGES 301 R+ + TG ++V+ + RSQ N+ A +LR+ LYE ELQKR E+ I E Sbjct: 256 RLRYQYKDPDTGQEEEILVENTESRSQLDNRENAMRLLRSILYEKELQKRLAELRKI-ED 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SK +I WG QIRSYV + VKD RTN + + + V+DGD+D+F+KA L Sbjct: 315 SKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGDIDEFIKAYL 363 >gi|329942484|ref|ZP_08291294.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10] gi|328815394|gb|EGF85382.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10] Length = 272 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 117/219 (53%), Positives = 159/219 (72%), Gaps = 3/219 (1%) Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + LLSGE D N +L ++AGAGGTES DW ML RMY RWA + ++K E ++ +G+ AG Sbjct: 40 QRLLSGEVDKNPCFLTINAGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAG 99 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IK T+ G AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I Sbjct: 100 IKHVTVKFSGDYAYGYAKAERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIR 159 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG++V CQ+ERSQ +N+ MLRA++ Sbjct: 160 PNDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARM 219 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Y+ LQ+R E I +K ++ +R +V+ + ++ Sbjct: 220 YQQILQERLEKQLIDRKNKKKL---LGVRKFVIMFFSLI 255 >gi|160885362|ref|ZP_02066365.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483] gi|237716574|ref|ZP_04547055.1| peptide chain release factor RF-2 [Bacteroides sp. D1] gi|237720319|ref|ZP_04550800.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4] gi|260172304|ref|ZP_05758716.1| peptide chain release factor RF-2 [Bacteroides sp. D2] gi|262405351|ref|ZP_06081901.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|293370547|ref|ZP_06617099.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC 3f] gi|294644599|ref|ZP_06722352.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC 2a] gi|294810341|ref|ZP_06769002.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens SD CC 1b] gi|315920609|ref|ZP_07916849.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156108984|gb|EDO10729.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483] gi|229442557|gb|EEO48348.1| peptide chain release factor RF-2 [Bacteroides sp. D1] gi|229450070|gb|EEO55861.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4] gi|262356226|gb|EEZ05316.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292634281|gb|EFF52818.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC 3f] gi|292640036|gb|EFF58301.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC 2a] gi|294442449|gb|EFG11255.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens SD CC 1b] gi|295086344|emb|CBK67867.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides xylanisolvens XB1A] gi|313694484|gb|EFS31319.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 319 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 126/286 (44%), Positives = 185/286 (64%), Gaps = 16/286 (5%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EED + + S+ ++ ++L+ ++L EAD D L++++GAGGTESQDW Sbjct: 34 ELVTEEDVDAAYAKASEAVEALELK-------NMLRDEADQMDCVLKINSGAGGTESQDW 86 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+ML+RMY R+AE +K + +G+EAGIK+ T+ I+G AYG+LKGE GVHRLVR+ Sbjct: 87 ASMLMRMYLRYAETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGENGVHRLVRV 146 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY++ +R TSF+S++V P+VDDSIE+ I ++ DT+R+ GAGGQ+VN +S VR+ Sbjct: 147 SPYNAQGKRMTSFASVFVTPLVDDSIEVNILPANISWDTFRSGGAGGQNVNKVESGVRLR 206 Query: 254 H----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 + TG ++++ + R Q KN+ A LR+ LY+ ELQ R E+ K + Sbjct: 207 YQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKK 266 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 267 IEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 311 >gi|153809227|ref|ZP_01961895.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185] gi|149128203|gb|EDM19423.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185] Length = 319 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 128/287 (44%), Positives = 187/287 (65%), Gaps = 18/287 (6%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL EED + + S+ ++ ++L+ ++L EAD D L++++GAGGTESQDW Sbjct: 34 ELVTEEDVDAAYAKASEAVEALELK-------NMLRDEADQMDCVLKINSGAGGTESQDW 86 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+ML+RMY R+AE +K + +G+EAGIK+ T+ I+G AYG+LKGE GVHRLVR+ Sbjct: 87 ASMLMRMYLRYAETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGENGVHRLVRV 146 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY++ +R TSF+S++V P+VDDSIE+ I + DT+R+ GAGGQ+VN +S VR+ Sbjct: 147 SPYNAQGKRMTSFASVFVTPLVDDSIEVNIETARISWDTFRSGGAGGQNVNKVESGVRLR 206 Query: 254 H----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKT 304 + TG ++++ + R Q KN+ A LR+ LY+ ELQ R E A + E+ K Sbjct: 207 YQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKV-EAGKM 265 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 266 KIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYL 311 >gi|255692994|ref|ZP_05416669.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565] gi|260621306|gb|EEX44177.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565] Length = 319 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 121/261 (46%), Positives = 174/261 (66%), Gaps = 9/261 (3%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 VE + +++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE +K + Sbjct: 52 VEALELKNMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+EAGIK+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDDS Sbjct: 112 EGDEAGIKTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDS 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270 IE+ I + DT+R+ GAGGQ+VN +S VR+ + TG ++++ + R Q Sbjct: 172 IEVNIETARISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQP 231 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN Sbjct: 232 KNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNY 290 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 + + + V+DG ++DF+KA L Sbjct: 291 QTSDVNGVMDGKIEDFIKAYL 311 >gi|260593398|ref|ZP_05858856.1| peptide chain release factor 2, programmed [Prevotella veroralis F0319] gi|260534674|gb|EEX17291.1| peptide chain release factor 2, programmed [Prevotella veroralis F0319] Length = 372 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 129/333 (38%), Positives = 205/333 (61%), Gaps = 14/333 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + ++ I E R + + L +D+ +E Sbjct: 36 RTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA--RSLTDEVQLAFDFYKDNLVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + +E + +++L E D + +++++GAGGTESQDWA+ML+RMY RW E Sbjct: 94 DTAYNKALKAIEDLELKNMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEAH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K +I +G+EAGIKS T+ +G AYG+LK E GVHRLVR+SP+++ +R TSF+ Sbjct: 154 GYKVTISDIQEGDEAGIKSVTMKFEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259 S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + TG + Sbjct: 214 SVFVSPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQ 318 +++ + R Q KN+A+A +L+++LY+ ++KR EE A I E+ K +I WG QIRSYV Sbjct: 274 LIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEEQAKI-EAGKKKIEWGSQIRSYVFD 332 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + V+DG +DDF+KA L Sbjct: 333 D-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYL 364 >gi|167842465|gb|ACA03160.1| RF2 [Dictyostelium fasciculatum] gi|328868131|gb|EGG16511.1| class I peptide chain release factor [Dictyostelium fasciculatum] Length = 425 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 128/316 (40%), Positives = 194/316 (61%), Gaps = 7/316 (2%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L++E H+ + I ++ + D L L+++A D ++QE +++ + +F Sbjct: 109 LLKEYNHIRVQVDQIDQLPVQFKDYLELVKMAKTAGDREMMQEAQSTTEQLMSQCNELEF 168 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +SL+S + D++ AY+E+HAGAGGT+S DW ML MY +WA +R F + ++ G+ G Sbjct: 169 KSLMSNDMDNDSAYMEIHAGAGGTDSMDWTQMLSSMYIKWASRRGFDAQIIDESHGDICG 228 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV--VDDSIEIE 222 K L I GP AYGW + E GVH+L+R+SP+++N +RHTSF+S++VYP D+ + ++ Sbjct: 229 YKKVILKISGPYAYGWTRTENGVHKLIRMSPFNTNGKRHTSFASVFVYPSSDADEKVAVD 288 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + D I+T R+SGAGGQH N T+SAVRITH P+G+ V QERSQHKNK A ++L++ Sbjct: 289 LVSRDLVIETMRSSGAGGQHTNKTESAVRITHTPSGLSVNISQERSQHKNKQIAMDLLKS 348 Query: 283 KLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 KL LEL+KR+E S + I G G R Y P +KD RT E ++ + L Sbjct: 349 KLLSLELRKRDEQEKNLRSEQMGINGFGSGSINRVYTQHPQTRIKDQRTGQESSNFEEFL 408 Query: 340 DG--DLDDFMKATLAI 353 G +LD +K L+I Sbjct: 409 QGGEELDQMIKEVLSI 424 >gi|288929843|ref|ZP_06423686.1| peptide chain release factor 2, programmed [Prevotella sp. oral taxon 317 str. F0108] gi|288328944|gb|EFC67532.1| peptide chain release factor 2, programmed [Prevotella sp. oral taxon 317 str. F0108] Length = 372 Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 128/332 (38%), Positives = 199/332 (59%), Gaps = 12/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + ++ I KE+ R + + L DD +E Sbjct: 36 RTQAPDFWDDPARAQEQMKKVKGIEKWIVGYKEV--RQAADELQLAFDFYHDDMVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ ++ VE + ++L + D D L++++GAGGTESQDWA ML+RMY RWAE Sbjct: 94 DEDYRKAITAVENLELMNMLRQKEDPMDCVLKINSGAGGTESQDWAQMLMRMYMRWAESH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + + +G+EAGIKS T+ I+G AYG+LK E GVHRLVR+SPY++ +R TSF+ Sbjct: 154 GHRVTISNLQEGDEAGIKSVTMEIEGGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG----V 259 S++V P+VDD+IE+ + S D +R+ GAGGQ+VN ++ VR+ T TG + Sbjct: 214 SVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGEEEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 +++ + R Q +N+ A +L+++LY+ ++KR E E+ K +I WG QIRSYV Sbjct: 274 LIENTESRKQLENRNNAMRLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + V+DG +DDF+KA L Sbjct: 334 -RRVKDHRTNYQTADVDGVMDGKIDDFIKAYL 364 >gi|288803779|ref|ZP_06409207.1| peptide chain release factor 2, programmed [Prevotella melaninogenica D18] gi|302345945|ref|YP_003814298.1| putative peptide chain release factor 2 [Prevotella melaninogenica ATCC 25845] gi|288333766|gb|EFC72213.1| peptide chain release factor 2, programmed [Prevotella melaninogenica D18] gi|302150148|gb|ADK96410.1| putative peptide chain release factor 2 [Prevotella melaninogenica ATCC 25845] Length = 371 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 127/334 (38%), Positives = 210/334 (62%), Gaps = 16/334 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI-QDRLCDNLILLELALEEDDCSILQE 87 +T+ P W + A+ M++ + ++ ++K+ + R + + L +D+ +E Sbjct: 36 RTQAPDFWDDPARAQEQMKKVKDIEK---WVKDYDKARALADEVQLAFDFYKDELVTEEE 92 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ +E + +++L E D + +++++GAGGTESQDWA+ML+RMY RW E Sbjct: 93 VDTAYAKVLKVIEGLELKNMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEA 152 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + ++ +I +G+EAGIKS T+ +G AYG+LK E GVHRLVR+SP+++ +R TSF Sbjct: 153 QGYRVTISDIQEGDEAGIKSVTMKFEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSF 212 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG---- 258 +S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + TG Sbjct: 213 ASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEE 272 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVL 317 ++++ + R Q KN+A+A +L+++LY+ ++KR EE A I E+ K +I WG QIRSYV Sbjct: 273 ILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEEQAKI-EAGKKKIEWGSQIRSYVF 331 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + V+DG +DDF+KA L Sbjct: 332 DD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYL 364 >gi|256370731|ref|YP_003108556.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM] gi|256009523|gb|ACU52883.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM] Length = 360 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 109/258 (42%), Positives = 175/258 (67%), Gaps = 3/258 (1%) Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E ++ L++I+ + + ++ + D+++A L++ AGAGGTES DW +ML RMY WAE Sbjct: 92 EINNLLKKIENLISKIELKNFFFEKEDASNAVLQISAGAGGTESCDWVSMLYRMYFLWAE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 K FK + L G+ G KS T +KG +G+LKGE GVHRLVRISP+D NS+RHTSF Sbjct: 152 KNNFKIKKLNSLQGDIIGFKSITFEVKGFYPFGYLKGENGVHRLVRISPFD-NSKRHTSF 210 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+++YP++ + ++I SD DT+R+ GAGGQ+VN ++ VR+ H PT ++++ + Sbjct: 211 ASVYIYPLIKKDLNLDIKASDITWDTFRSGGAGGQNVNKVETGVRLHHRPTNIIIENSET 270 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +NK +A +L+++LY +E QK + + +K +I WG QIR+Y++ PY++VKD+ Sbjct: 271 RSQIQNKNKALKLLKSRLYYIEKQKL--FKSKMKFNKKKIEWGSQIRNYIMHPYKLVKDI 328 Query: 327 RTNIEKTSPSDVLDGDLD 344 +T E + VL+G+++ Sbjct: 329 KTGYETSDIHSVLNGEIN 346 >gi|256842350|ref|ZP_05547853.1| peptide chain release factor RF-2 [Parabacteroides sp. D13] gi|256735957|gb|EEU49288.1| peptide chain release factor RF-2 [Parabacteroides sp. D13] Length = 322 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/257 (45%), Positives = 169/257 (65%), Gaps = 9/257 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F ++L EAD L++++GAGGTESQDWA+ML+RMY RWAE +K +G+E Sbjct: 56 EFRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDE 115 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIK+ T I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE++ Sbjct: 116 AGIKTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVK 175 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274 + + DT+R+ GAGGQ+VN +S VR+ + TG ++++ + R Q KN+ Sbjct: 176 VEAAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRE 235 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + Sbjct: 236 NAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSD 294 Query: 335 PSDVLDGDLDDFMKATL 351 + V+DG +DDF+KA L Sbjct: 295 VNGVMDGKIDDFIKAYL 311 >gi|255016197|ref|ZP_05288323.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_7] Length = 322 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/257 (45%), Positives = 169/257 (65%), Gaps = 9/257 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F ++L EAD L++++GAGGTESQDWA+ML+RMY RWAE +K +G+E Sbjct: 56 EFRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDE 115 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIK+ T I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE++ Sbjct: 116 AGIKTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVK 175 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274 + + DT+R+ GAGGQ+VN +S VR+ + TG ++++ + R Q KN+ Sbjct: 176 VEAAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRE 235 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + Sbjct: 236 NAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSD 294 Query: 335 PSDVLDGDLDDFMKATL 351 + V+DG +DDF+KA L Sbjct: 295 VNGVMDGKIDDFIKAYL 311 >gi|298377870|ref|ZP_06987820.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19] gi|301312251|ref|ZP_07218168.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3] gi|298265316|gb|EFI06979.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19] gi|300829673|gb|EFK60326.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3] Length = 322 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/257 (45%), Positives = 170/257 (66%), Gaps = 9/257 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F ++L EAD L++++GAGGTESQDWA+ML+RMY RWAE +K +G+E Sbjct: 56 EFRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDE 115 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIK+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE++ Sbjct: 116 AGIKTVTIDIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVK 175 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274 + + DT+R+ GAGGQ+VN +S VR+ + TG ++++ + R Q KN+ Sbjct: 176 VEAAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRE 235 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + Sbjct: 236 NAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSD 294 Query: 335 PSDVLDGDLDDFMKATL 351 + V+DG +DDF+KA L Sbjct: 295 VNGVMDGKIDDFIKAYL 311 >gi|150009345|ref|YP_001304088.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC 8503] gi|262384740|ref|ZP_06077873.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B] gi|149937769|gb|ABR44466.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC 8503] gi|262293721|gb|EEY81656.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B] Length = 322 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/257 (45%), Positives = 169/257 (65%), Gaps = 9/257 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F ++L EAD L++++GAGGTESQDWA+ML+RMY RWAE +K +G+E Sbjct: 56 EFRNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDE 115 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AGIK+ T I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE++ Sbjct: 116 AGIKTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVK 175 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274 + + DT+R+ GAGGQ+VN +S VR+ + TG ++++ + R Q KN+ Sbjct: 176 VETAAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRE 235 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + Sbjct: 236 NAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSD 294 Query: 335 PSDVLDGDLDDFMKATL 351 + V+DG +DDF+KA L Sbjct: 295 VNGVMDGKIDDFIKAYL 311 >gi|255010031|ref|ZP_05282157.1| putative peptide chain release factor [Bacteroides fragilis 3_1_12] Length = 319 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 126/289 (43%), Positives = 184/289 (63%), Gaps = 11/289 (3%) Query: 73 LELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LELA + +D+ QE + + VE + +++L EAD L++++GAGGTES Sbjct: 24 LELAFDFYKDELVTEQEVDEAYAKALEHVENLELQNMLRDEADQMSCVLKINSGAGGTES 83 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I+G AYG+LKGE GVHRL Sbjct: 84 QDWASMLMRMYLRYAETNGYKATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRL 143 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR+SPY++ +R TSF+S++V P+VDDSIE+ I + DT+R+ GAGGQ+VN +S V Sbjct: 144 VRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGV 203 Query: 251 RITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 R+ + TG ++++ + R Q KN+ A LR+ LY+ ELQ R E+ Sbjct: 204 RLRYQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAG 263 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV + VKD RTN + + + V+DG ++ F+KA L Sbjct: 264 KKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIEGFIKAYL 311 >gi|53711665|ref|YP_097657.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46] gi|60679910|ref|YP_210054.1| putative peptide chain release factor [Bacteroides fragilis NCTC 9343] gi|253564278|ref|ZP_04841735.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265765049|ref|ZP_06093324.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52214530|dbj|BAD47123.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46] gi|60491344|emb|CAH06092.1| putative peptide chain release factor [Bacteroides fragilis NCTC 9343] gi|251948054|gb|EES88336.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263254433|gb|EEZ25867.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301161435|emb|CBW20975.1| putative peptide chain release factor [Bacteroides fragilis 638R] Length = 319 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 126/289 (43%), Positives = 184/289 (63%), Gaps = 11/289 (3%) Query: 73 LELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LELA + +D+ QE + + VE + +++L EAD L++++GAGGTES Sbjct: 24 LELAFDFYKDELVTEQEVDEAYAKALEHVENLELQNMLRDEADQMSCVLKINSGAGGTES 83 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I+G AYG+LKGE GVHRL Sbjct: 84 QDWASMLMRMYLRYAETNGYKATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRL 143 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR+SPY++ +R TSF+S++V P+VDDSIE+ I + DT+R+ GAGGQ+VN +S V Sbjct: 144 VRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGV 203 Query: 251 RITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 R+ + TG ++++ + R Q KN+ A LR+ LY+ ELQ R E+ Sbjct: 204 RLRYQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAG 263 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV + VKD RTN + + + V+DG ++ F+KA L Sbjct: 264 KKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIEGFIKAYL 311 >gi|213861334|ref|ZP_03385804.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 197 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 118/187 (63%), Positives = 141/187 (75%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ E GVHRLV Sbjct: 71 DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLV 130 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 131 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVR 190 Query: 252 ITHIPTG 258 ITHIPTG Sbjct: 191 ITHIPTG 197 >gi|66805655|ref|XP_636549.1| class I peptide chain release factor [Dictyostelium discoideum AX4] gi|60464924|gb|EAL63039.1| class I peptide chain release factor [Dictyostelium discoideum AX4] Length = 424 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 126/292 (43%), Positives = 184/292 (63%), Gaps = 11/292 (3%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ++E++ D L+ET + ++ + ++L++G+ DS LE+ AGAGG Sbjct: 136 DYLEVVEMSKNIGDNDWLKETRSLINQLFSNCSELEVKALMNGKDDSKGCLLEIQAGAGG 195 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 +S DW +L MY +W ++ + E ++ DGE G + A+L I G NAYGWL+ E G+ Sbjct: 196 NDSMDWTKILFEMYCKWGARKGYNVEIIDTADGE-FGYRHASLKIDGHNAYGWLRTEMGI 254 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+ S+ +RHTSF+S+ VYP+ DDSI+I I D +T R+SGAGGQHVN T+ Sbjct: 255 HRLIRISPFSSSGKRHTSFASVVVYPISDDSIKINIDPKDLHFETLRSSGAGGQHVNKTE 314 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRI HIPTG+ V ERSQH+NK+ +L++KLY EL+K+ E +S + E+G Sbjct: 315 SAVRIVHIPTGISVLSSSERSQHQNKSNGLLLLKSKLYSHELKKKIEAE---KSFRDELG 371 Query: 308 ---WGRQ--IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLA 352 W +R+Y + P + VKD RT IE S +LDG +LD+ +K L+ Sbjct: 372 KNSWASDSVVRNYSMHPQERVKDQRTGIEVLQISKILDGEEELDNMIKKALS 423 >gi|288927134|ref|ZP_06421019.1| peptide chain release factor 2, programmed [Prevotella buccae D17] gi|288336096|gb|EFC74492.1| peptide chain release factor 2, programmed [Prevotella buccae D17] Length = 373 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 126/332 (37%), Positives = 208/332 (62%), Gaps = 12/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W++ A+ M++ + ++ + KE++ + D L L +D S + Sbjct: 36 RTQAPDFWEDPTRAQEQMKKVKSIEKWLDGYKEVR-QYADELQLAFDFFHDDMVSEEEVD 94 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +D + IK +E + +++L + D +A +++++GAGGTESQDWA+ML+RMY RW E Sbjct: 95 ADYAKAIKA-IEALELKNMLRQKEDPMEAVIKINSGAGGTESQDWASMLMRMYMRWCEAH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 ++ + +G+EAGIKS T+ ++G AYG+LK E GVHRLVR+SP+++ +R TSF+ Sbjct: 154 GYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259 S++V P+VDD+IE+ + + DT+R+ GAGGQ+VN +S VR+ + TG + Sbjct: 214 SVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNVNKVESGVRLRYWYQDPDTGEEEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 +++ + R Q KN+A+A +L+++LY+ ++KR E E+ K +I WG QIRSYV Sbjct: 274 LIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + V+DG +D+F+KA L Sbjct: 334 -RRVKDHRTNYQTADVDGVMDGKIDEFIKAYL 364 >gi|315607246|ref|ZP_07882247.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574] gi|315251063|gb|EFU31051.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574] Length = 373 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 126/332 (37%), Positives = 208/332 (62%), Gaps = 12/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W++ A+ M++ + ++ + KE++ + D L L +D S + Sbjct: 36 RTQAPDFWEDPARAQEQMKKVKSIEKWLDGYKEVR-QYADELQLAFDFFHDDMVSEEEVD 94 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +D + IK +E + +++L + D +A +++++GAGGTESQDWA+ML+RMY RW E Sbjct: 95 ADYAKAIKA-IEALELKNMLRQKEDPMEAVIKINSGAGGTESQDWASMLMRMYMRWCEAH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 ++ + +G+EAGIKS T+ ++G AYG+LK E GVHRLVR+SP+++ +R TSF+ Sbjct: 154 GYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259 S++V P+VDD+IE+ + + DT+R+ GAGGQ+VN +S VR+ + TG + Sbjct: 214 SVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNVNKVESGVRLRYWYQDPDTGEEEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 +++ + R Q KN+A+A +L+++LY+ ++KR E E+ K +I WG QIRSYV Sbjct: 274 LIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + V+DG +D+F+KA L Sbjct: 334 -RRVKDHRTNYQTADVDGVMDGKIDEFIKAYL 364 >gi|260911088|ref|ZP_05917720.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472 str. F0295] gi|260634786|gb|EEX52844.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472 str. F0295] Length = 394 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 126/332 (37%), Positives = 199/332 (59%), Gaps = 12/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + ++ I KE+ R + + L D+ +E Sbjct: 58 RTQAPDFWDDPARAQEQMKKVKGIEKWIVGYKEV--RQATDELQLAFDFYHDEMVTEEEV 115 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ ++ +E + ++L + D D L++++GAGGTESQDWA ML+RMY RWAE Sbjct: 116 DEDYRKAITAIENLELMNMLRQKEDPMDCVLKINSGAGGTESQDWAQMLMRMYMRWAEAH 175 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + + +G+EAGIKS T+ I+G AYG+LK E GVHRLVR+SPY++ +R TSF+ Sbjct: 176 GHRVTISNLQEGDEAGIKSVTMEIEGGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFA 235 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG----V 259 S++V P+VDD+IE+ + S D +R+ GAGGQ+VN ++ VR+ T TG + Sbjct: 236 SVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGEEEEI 295 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 +++ + R Q +N+ A +L+++LY+ ++KR E E+ K +I WG QIRSYV Sbjct: 296 LIENTESRKQLENRNNAMRLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 355 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + V+DG +DDF+KA L Sbjct: 356 -RRVKDHRTNYQTADVDGVMDGKIDDFIKAYL 386 >gi|307566238|ref|ZP_07628684.1| putative peptide chain release factor 2 [Prevotella amnii CRIS 21A-A] gi|307345042|gb|EFN90433.1| putative peptide chain release factor 2 [Prevotella amnii CRIS 21A-A] Length = 374 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 126/334 (37%), Positives = 203/334 (60%), Gaps = 16/334 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86 +T+ P W++ A+ M++ + ++ + D+ L+LA + +D Sbjct: 36 RTQAPDFWESPDYARQQMKKVKEIERWVKGY----DKAKAQAEELQLAFDFYKDKLVTED 91 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E ++ +E + +++L E D + +++++GAGGTESQDWA ML+RMY RW E Sbjct: 92 EVDTMYNKVVSTIEDLELKNMLRQEEDPMECVMKINSGAGGTESQDWAEMLMRMYMRWGE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 +K +I G+EAGIKS T+ + G AYG+LK E GVHRLVR+SP+++ +R TS Sbjct: 152 AHGYKVTISDILSGDEAGIKSVTMKFESGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTS 211 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG--- 258 F+S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + TG Sbjct: 212 FASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEKE 271 Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 ++++ + R Q KN+A+A +L+++LY E++KR E E++K +I WG QIRSYV Sbjct: 272 EILIENTETRDQPKNRAKAMQLLKSQLYNREMKKRMEAQAKVEAAKKKIEWGSQIRSYVF 331 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + V++G +DDF+KA L Sbjct: 332 DD-RRVKDHRTNYQTSDVEGVMNGKIDDFIKAYL 364 >gi|303236882|ref|ZP_07323461.1| putative peptide chain release factor 2 [Prevotella disiens FB035-09AN] gi|302483050|gb|EFL46066.1| putative peptide chain release factor 2 [Prevotella disiens FB035-09AN] Length = 371 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 121/334 (36%), Positives = 210/334 (62%), Gaps = 16/334 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQ 86 +T+ P W++ A+ M++ + ++ I + ++ + + L+LA + +D+ + Sbjct: 36 RTQAPDFWEDAERAQEQMKKVKGIEKWIKGYENVKTQADE----LQLAFDFYKDELVTEE 91 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + ++ ++E + ++L E D + +++++GAGGTESQDWA+ML+RMY R+ E Sbjct: 92 DVDTAYAKVITDIENLELMNMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMYMRYGE 151 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + +K +I +G+EAGIKS T+ +G A+G+LK E GVHRLVR+SP+++ +R TS Sbjct: 152 QHGYKVTIADIQEGDEAGIKSVTMKFEGGEYAFGFLKSENGVHRLVRVSPFNAQGKRMTS 211 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI----PTG--- 258 F+S++V P++DD+IE+ + + DT+R+ GAGGQ+VN +S VR+ ++ TG Sbjct: 212 FASVFVSPLIDDTIEVFVDPARVSWDTFRSGGAGGQNVNKVESGVRLRYMYQDPDTGEEE 271 Query: 259 -VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 ++++ + R Q KN+A+A +L+++LY+ ++KR E E+SK +I WG QIRSYV Sbjct: 272 EILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEAQAKVEASKKKIEWGSQIRSYVF 331 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + V+DG +D F+KA L Sbjct: 332 DD-RRVKDHRTNYQTSDVDGVMDGKIDGFIKAYL 364 >gi|288801053|ref|ZP_06406509.1| peptide chain release factor 2, programmed [Prevotella sp. oral taxon 299 str. F0039] gi|288331987|gb|EFC70469.1| peptide chain release factor 2, programmed [Prevotella sp. oral taxon 299 str. F0039] Length = 373 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 127/332 (38%), Positives = 201/332 (60%), Gaps = 12/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W +V A+ M++ + ++ + KE+ RL + + L D+ E Sbjct: 36 RTQAPDFWDDVERAQEQMKKVKGIEKWLVGYKEV--RLLADELQLSFDFFHDEMVSESEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++ VE + ++L + D D L++++GAGGTESQDWA+ML+R+Y RWAE Sbjct: 94 DETYKKALQAVEALELMNMLRQKEDPMDCVLKINSGAGGTESQDWASMLMRLYMRWAESH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 K + +G+EAGIKS T+ I+G AYG+LK E GVHRLVR+SP+++ +R TSF+ Sbjct: 154 GHKVTISNLQEGDEAGIKSVTMEIEGGEFAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTGV---- 259 S++V P+VDD+IE+ + S D +R+ GAGGQ+VN ++ VR+ T TGV Sbjct: 214 SVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGVEEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 +++ + R Q +N+ A +L+++LY+ ++KR E E+ K +I WG QIRSYV Sbjct: 274 LIENTESRKQLENRNNAMRLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + T V++G +D+F+KA L Sbjct: 334 -RRVKDHRTNYQTTDVDGVMNGKIDEFIKAYL 364 >gi|325268643|ref|ZP_08135273.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608] gi|324989171|gb|EGC21124.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608] Length = 371 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 128/333 (38%), Positives = 203/333 (60%), Gaps = 14/333 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + A+ M++ + ++ I E R + L +D+ +E Sbjct: 36 RTQAPDFWDDPKRAQEQMKKVKEIEKWIKGYDEA--RSLTDEAQLAFDFYKDELVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + +E + +++L E D + +++++GAGGTESQDWA+ML+RMY RW E Sbjct: 94 DTAYDKAFKVIEDLELKNMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMYMRWGEAH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K +I +G+EAGIKS T+ +G AYG+LK E GVHRLVR+SP+++ +R TSF+ Sbjct: 154 GYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----V 259 S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + TG + Sbjct: 214 SVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPDTGEQEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQ 318 +++ + R Q KN+A+A +L+++LY+ ++KR EE A I E+ K +I WG QIRSYV Sbjct: 274 LIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEEQAKI-EAGKKKIEWGSQIRSYVFD 332 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + + V+DG +D F+KA L Sbjct: 333 D-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYL 364 >gi|187918069|ref|YP_001883632.1| peptide chain release factor 1 [Borrelia hermsii DAH] gi|238689283|sp|B2RZQ6|RF1_BORHD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119860917|gb|AAX16712.1| bacterial peptide chain release factor 1 [Borrelia hermsii DAH] Length = 357 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 143/350 (40%), Positives = 210/350 (60%), Gaps = 32/350 (9%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----------NAISFIKEIQDRLCD--N 69 ++ L K +D +L +N E ++E +L+ N +S I E Q L + N Sbjct: 12 KIKILEEKLQDINLVKNQKEYAKTVKEYNYLEKIKAKKDEYENILSQINENQKILSEEEN 71 Query: 70 LILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L + EL +E ++ ++ +++ +I L L E DS + +E+ AG GG Sbjct: 72 LEMKELVKQELAHLNLKKDEVEHMIKILL---------LHQDENDSKNIIIEIRAGTGGE 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ L MYT+++EK+K+KTE + ++ E G K + IKG + + LK E GVH Sbjct: 123 EAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKDVFKKLKHESGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +SN R TS +++ V P V+D+ +IEI+E D RID YR+SGAGGQHVNTTDS Sbjct: 183 RVQRVPITESNGRLQTSAATVAVLPEVEDT-DIEINEKDLRIDVYRSSGAGGQHVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIG 307 AVRITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E L+K+E+ +N K ++G Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFENLKKQEQRSN---DRKQQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G +IR+Y P V D R NI +++ G+L DF+ TLA+K Sbjct: 299 SGDRSERIRTYNF-PQNRVTDHRANISLYKLEEIMQGEL-DFLLDTLALK 346 >gi|325860237|ref|ZP_08173362.1| putative peptide chain release factor 2 [Prevotella denticola CRIS 18C-A] gi|325482324|gb|EGC85332.1| putative peptide chain release factor 2 [Prevotella denticola CRIS 18C-A] Length = 371 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 132/340 (38%), Positives = 208/340 (61%), Gaps = 28/340 (8%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCDNLILLELALEEDD 81 +T+ P W + A+ M++ + + D A S +E Q L + EL EE+ Sbjct: 36 RTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEARSLTEETQ--LAFDFYKDELVTEEEV 93 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + + ++ ++L+ ++L E D + +++++GAGGTESQDWA+ML+RMY Sbjct: 94 DAAYAKALKVIEDLELK-------NMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMY 146 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNS 200 RW E +K +I +G+EAGIKS T+ +G AYG+LK E GVHRLVR+SP+++ Sbjct: 147 MRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYLKSENGVHRLVRVSPFNAQG 206 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IP 256 +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + Sbjct: 207 KRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPD 266 Query: 257 TG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 TG ++++ + R Q KN+A+A +L+++LY+ ++KR EE A I E+ K +I WG Q Sbjct: 267 TGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRIEEQAKI-EAGKKKIEWGSQ 325 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYV + VKD RTN + + V+DG +D F+KA L Sbjct: 326 IRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYL 364 >gi|327312646|ref|YP_004328083.1| putative peptide chain release factor 2 [Prevotella denticola F0289] gi|326945641|gb|AEA21526.1| putative peptide chain release factor 2 [Prevotella denticola F0289] Length = 371 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 132/340 (38%), Positives = 208/340 (61%), Gaps = 28/340 (8%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCDNLILLELALEEDD 81 +T+ P W + A+ M++ + + D A S +E Q L + EL EE+ Sbjct: 36 RTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEARSLTEETQ--LAFDFYKDELVTEEEV 93 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + + ++ ++L+ ++L E D + +++++GAGGTESQDWA+ML+RMY Sbjct: 94 DAAYAKALKVIEDLELK-------NMLRQEEDPMECVMKINSGAGGTESQDWASMLMRMY 146 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNS 200 RW E +K +I +G+EAGIKS T+ +G AYG+LK E GVHRLVR+SP+++ Sbjct: 147 MRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYLKSENGVHRLVRVSPFNAQG 206 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IP 256 +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + Sbjct: 207 KRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPD 266 Query: 257 TG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQ 311 TG ++++ + R Q KN+A+A +L+++LY+ ++KR EE A I E+ K +I WG Q Sbjct: 267 TGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEEQAKI-EAGKKKIEWGSQ 325 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYV + VKD RTN + + V+DG +D F+KA L Sbjct: 326 IRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYL 364 >gi|212550868|ref|YP_002309185.1| peptide chain release factor 2 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549106|dbj|BAG83774.1| peptide chain release factor 2 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 328 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 119/289 (41%), Positives = 186/289 (64%), Gaps = 11/289 (3%) Query: 73 LELALEEDDCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+LA + + ++ +E + L +E + +++L E D A ++++AGAGGTE+ Sbjct: 34 LQLAFDFNKEGVVSEEEVDKVYSDVVLLIEQLELKNMLHSEEDHLGAVIKINAGAGGTEA 93 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ML RMY+RW E + +K +G++AGIK+ TL ++G +A+G+LK E GVHRL Sbjct: 94 QDWVAMLYRMYSRWCEVKMYKVNITNWLEGDDAGIKTVTLQVEGDDAFGYLKSENGVHRL 153 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR+SPY++ +R TSF+S+ V P++DD+IEI+I+ D DT+R+SGAGGQ+VN ++ V Sbjct: 154 VRVSPYNAQGKRMTSFASVAVVPLIDDTIEIDINLGDITWDTFRSSGAGGQNVNKVETGV 213 Query: 251 RITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 R+ + + +V++ + RSQ NK A +L++ LY+LEL++R + E+ Sbjct: 214 RLHYNYKDPNSGETSEIVIENTESRSQFGNKDNAIRLLKSHLYKLELKRRRQAFAKIEAH 273 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV + VKD RT + ++ V+DGDLDD +KA L Sbjct: 274 KKKIEWGSQIRSYVFDD-RRVKDHRTGWQTSNVQAVMDGDLDDLIKAYL 321 >gi|224003217|ref|XP_002291280.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973056|gb|EED91387.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 343 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 126/340 (37%), Positives = 197/340 (57%), Gaps = 20/340 (5%) Query: 22 RLSFLNTKTEDPHLW--QNVIEAKMLMRE--------------RQHLDNAISFIKEIQDR 65 RL L T+T P W N ++++ RE + +A+ ++ +QD Sbjct: 4 RLQDLETETSSPSFWDASNSDRSEVVTREIGRYTRLKGEMEGWERLRGDALGALELLQDL 63 Query: 66 LCDNLILLELALEEDDCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L + +ED+ +L +E + Q++ + + + ++LLSG DS L++ A Sbjct: 64 LDGSSGGDNFEEDEDEMILLTFEECQSSAQKLLEQSQKYELQTLLSGPYDSAQCTLQLTA 123 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW +ML RMY R A+ +K LE G+ G KS LL++G NAYGW KG Sbjct: 124 GAGGTEACDWVSMLYRMYMRHAQFMDYKVTVLEESVGDVVGYKSVELLVEGVNAYGWFKG 183 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRASGAGGQ 241 E+G HRLVR+SP+++N++R T+F+ + V P++++ EI+I E + I T R+ G GGQ Sbjct: 184 EKGAHRLVRLSPFNANNKRQTTFAGVDVIPLLEEGTVSEIDIPEKELEITTMRSGGKGGQ 243 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++ VR+ HIP+G+ ++C QERSQ +NK A L+ +L + +++ + N Sbjct: 244 NVNKVETGVRVKHIPSGIAIKCTQERSQSQNKQIALTRLKGQLLVIAQEQQLQSINAIRG 303 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 E WG QIR+YV+QPY+MVKD R+ E + VLDG Sbjct: 304 DIVEASWGAQIRNYVMQPYKMVKDARSGWETSDVEGVLDG 343 >gi|29348961|ref|NP_812464.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron VPI-5482] gi|29340868|gb|AAO78658.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron VPI-5482] Length = 319 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 119/261 (45%), Positives = 173/261 (66%), Gaps = 9/261 (3%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 VE + +++L EAD L++++GAGGTESQDWA+ML+RMY R+AE +K + Sbjct: 52 VEALELKNMLRDEADQMACVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQ 111 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G+EAGIK+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDDS Sbjct: 112 EGDEAGIKTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDS 171 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQH 270 IE+ I + DT+R+ GAGGQ+VN +S VR+ + TG ++++ + R Q Sbjct: 172 IEVNILPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQP 231 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 KN+ A LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN Sbjct: 232 KNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNY 290 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 + + + V+DG +++F+KA L Sbjct: 291 QTSDVNGVMDGKIEEFIKAYL 311 >gi|282859886|ref|ZP_06268974.1| peptide chain release factor 2-like protein [Prevotella bivia JCVIHMP010] gi|282587289|gb|EFB92506.1| peptide chain release factor 2-like protein [Prevotella bivia JCVIHMP010] Length = 374 Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 127/339 (37%), Positives = 208/339 (61%), Gaps = 26/339 (7%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCDNLILLELALEEDD 81 +T+ P W++ A+ M++ + + D A + +E+Q L + EL EE+ Sbjct: 36 RTQAPDFWEDPDRAREQMKKVKEIERWVKGYDKARAQAEELQ--LAFDFYKDELVTEEEV 93 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 +I + ++ ++L+ ++L + D + +++++GAGGTESQDWA+ML+RMY Sbjct: 94 DAIYNKVVATIEDLELK-------NMLRQQEDPMECVMKINSGAGGTESQDWADMLMRMY 146 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNS 200 RW E +K +I G+EAGIKS T+ +G A+G+LK E GVHRLVR+SP+++ Sbjct: 147 MRWGEAHGYKVTISDIQVGDEAGIKSVTMKFEGGEYAFGYLKSENGVHRLVRVSPFNAQG 206 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IP 256 +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN +S VR+ + Sbjct: 207 KRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQNVNKVESGVRLRYQYEDPD 266 Query: 257 TG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TG ++++ + R Q KN+A+A +L+++LY+ ++KR E E++K +I WG QI Sbjct: 267 TGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEAQAKVEAAKKKIEWGSQI 326 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYV + VKD RTN + + V++G LD F+KA L Sbjct: 327 RSYVFDD-RRVKDHRTNYQTSDVDSVMNGKLDGFIKAYL 364 >gi|304383714|ref|ZP_07366173.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973] gi|304335238|gb|EFM01509.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973] Length = 374 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 122/332 (36%), Positives = 199/332 (59%), Gaps = 12/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W++ A+ M++ + + + E+ R + + L D+ +E Sbjct: 36 RTQAPDFWEDTARAQEQMKKVKGIKRWLDGYAEV--RTLTDELQLAFDFYHDEMVTEEEV 93 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 D+ ++ +E + ++L + D L++++GAGGTESQDWA ML+RMY RWAE Sbjct: 94 EDDYRKAVKAIENLELMNMLRQKEDPMGCVLKINSGAGGTESQDWAQMLMRMYVRWAEAH 153 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPN-AYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 ++ + +G+EAGIKS T+ I+G AYG+LK E GVHRLVR+SP+++ +R TSF+ Sbjct: 154 GYRCTISNLQEGDEAGIKSVTMEIEGGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFA 213 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI----THIPTG----V 259 S++V P+VDD+IE+ + + D +R+ GAGGQ+VN ++ VR+ T TG + Sbjct: 214 SVFVSPLVDDTIEVYVDPAKVSWDLFRSGGAGGQNVNKVETGVRLRYQYTDPDTGEEEEI 273 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 +++ + R Q +N+ A +L+++LY+ ++KR E E+ K +I WG QIRSYV Sbjct: 274 LIENTESRKQLENRNNAMRLLKSQLYDRAMKKRLEAQAKIEAGKKKIEWGSQIRSYVFDD 333 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + VKD RTN + T V+DG +D+F+KA L Sbjct: 334 -RRVKDHRTNYQTTDVDGVMDGKIDEFIKAYL 364 >gi|291533125|emb|CBL06238.1| Protein chain release factor B [Megamonas hypermegale ART12/1] Length = 182 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 100/155 (64%), Positives = 128/155 (82%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY RWAE+ F E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D+N Sbjct: 1 MYGRWAERNGFSVETADLLPGDEAGVKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDAN 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 SRRHTSFS+ V P +DD +E++I+ +D R+DTYRASGAGGQH+N TDSAVR+THIPTGV Sbjct: 61 SRRHTSFSACDVMPEIDDDVEVDINMADVRVDTYRASGAGGQHINKTDSAVRMTHIPTGV 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 V QCQ ERSQ +N+ Q +LRA+L+ELE++K+E+ Sbjct: 121 VAQCQSERSQLQNREQCLRLLRARLFELEMEKKEK 155 >gi|145347488|ref|XP_001418196.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578425|gb|ABO96489.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 278 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 113/272 (41%), Positives = 180/272 (66%), Gaps = 6/272 (2%) Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 +L+E +++ + ++ + LL G+ D+ A L+++AGAGG ++QDW ML RMY Sbjct: 1 MLREALTSVEALDKALDAWELRRLLGGKYDAFGAVLQIYAGAGGLDAQDWTEMLERMYLG 60 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W EKR F A E +GE G+K+ATL ++G AYG+L E+G HRLVR SP++ ++ R Sbjct: 61 WCEKRGFAVRATERLEGEGGGLKTATLEVEGRYAYGYLSSEKGTHRLVRQSPFNKDAARQ 120 Query: 204 TSFSSIWVYPVVDDSIE--IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 TSF+++ V P+ ++ +E +++ ++D + T R+ GAGGQ+VN ++AVRI HIPTG+ V Sbjct: 121 TSFAAVDVIPLFEEDMEEVVKVPDTDLEVTTMRSGGAGGQNVNKVETAVRIKHIPTGITV 180 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQIRSYVLQP 319 + ++ R+Q N+ A ++AKL L + R +IA + G+ K E WG+QIR+YVL P Sbjct: 181 KAEEHRTQQLNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAE--WGQQIRNYVLHP 238 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y++VKD+RT +E + + VL+G LD++M L Sbjct: 239 YKLVKDVRTGVETSDANKVLNGALDEYMNGYL 270 >gi|224534432|ref|ZP_03675010.1| peptide chain release factor 1 [Borrelia spielmanii A14S] gi|224514534|gb|EEF84850.1| peptide chain release factor 1 [Borrelia spielmanii A14S] Length = 357 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 134/343 (39%), Positives = 207/343 (60%), Gaps = 13/343 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCD 68 L ++A ++ + K +D +L +N + +++E HL+ I + K I +++ D Sbjct: 3 LEKLNSATSKIKSIEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEK-ILNQIND 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 N +LE +++ ++++ +L + K EVE++ + L E DS + +E+ AG GG Sbjct: 62 NKTILEKEDQQEMKELIKQELIDLDKKKEEVEHEIKILLLPQDENDSKNIIIEIRAGTGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GV Sbjct: 122 EEAALFANNLYGMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGV 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +SN R TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTD Sbjct: 182 HRVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G Sbjct: 241 SAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G +IR+Y P + D R NI + + G+LD + Sbjct: 299 SGDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLL 340 >gi|160902302|ref|YP_001567883.1| peptide chain release factor 1 [Petrotoga mobilis SJ95] gi|160359946|gb|ABX31560.1| peptide chain release factor 1 [Petrotoga mobilis SJ95] Length = 356 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 137/349 (39%), Positives = 211/349 (60%), Gaps = 18/349 (5%) Query: 13 LFDWDNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D+ V++ + L + DP++ ++ K L +E L + + + L D Sbjct: 3 ILDFKGEVKKKIKELEKQLSDPYITNDIENLKKLGQEHSKLSELNTLFESYEQDLEDIKA 62 Query: 72 LLEL-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGA 125 L E+ EE+ S+LQE + + ++ E L+S E D + +E+ AG Sbjct: 63 LREMYENKDVSEEEYQSMLQELEKKEEETRKKI----IEGLVSQDEYDERNIIMEIRAGT 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A+ L+RMY R+AE++ +K E L++++ E GIK+A L IKG AY LK E Sbjct: 119 GGDEASLFASELMRMYLRYAERKNWKYELLDLNENELGGIKTAILKIKGQGAYRRLKYES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S+ R HTS +++ V P D I+++I+E+D RIDTYRASGAGGQ+VN Sbjct: 179 GVHRVQRVPQTESSGRIHTSTATVAVLPEATD-IDVQINENDLRIDTYRASGAGGQYVNK 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV CQ ERSQH+NK +A N+LRAKL+E++L+ E+ + + + K++ Sbjct: 238 TDSAVRITHLPTGIVVTCQNERSQHQNKEKALNILRAKLFEIKLE--EQQSQLTQERKSQ 295 Query: 306 IGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IG + +IR+Y P V D R +++LDGDLD+ + L Sbjct: 296 IGTAQRSEKIRTYNF-PQNRVTDHRIQYTTHRINEILDGDLDEIIDKLL 343 >gi|255017364|ref|ZP_05289490.1| peptide chain release factor 2 [Listeria monocytogenes FSL F2-515] Length = 231 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 113/228 (49%), Positives = 150/228 (65%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R++ L + DP+ W + A+ ++ E +++ I LEL EE D Sbjct: 4 RIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEAD 63 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY Sbjct: 64 EDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMY 123 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ R Sbjct: 124 QRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGR 183 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 RHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSA Sbjct: 184 RHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSA 231 >gi|219685818|ref|ZP_03540627.1| peptide chain release factor 1 [Borrelia garinii Far04] gi|219672651|gb|EED29681.1| peptide chain release factor 1 [Borrelia garinii Far04] Length = 357 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 134/344 (38%), Positives = 207/344 (60%), Gaps = 15/344 (4%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCD 68 L ++A ++ L K +D +L +N + +++E HL+ I + K I ++ D Sbjct: 3 LEKLNSATTKIKSLEEKLQDVNLIKNQKKYSKIIKEYTHLEKINTKKIEYEK-ILSQIND 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 N +LE +++ ++++ +L + K ++E+ Q + LL E DS + +E+ AG G Sbjct: 62 NKTILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +AN L MY +++E++K+KTE + ++ E G K IKG + + LK E G Sbjct: 121 GEEAALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ RI +SN R TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTT Sbjct: 181 VHRVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++ Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G G +IR+Y P + D R NI + + G+LD + Sbjct: 298 GSGDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLL 340 >gi|145627802|ref|ZP_01783603.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21] gi|144979577|gb|EDJ89236.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21] Length = 183 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 113/180 (62%), Positives = 142/180 (78%), Gaps = 1/180 (0%) Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID Sbjct: 1 MSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRID 60 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK Sbjct: 61 VYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQK 120 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E +K++IGWG QIRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 121 KNADKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASL 179 >gi|301346253|ref|ZP_07226994.1| peptide chain release factor 2 [Acinetobacter baumannii AB056] gi|301513591|ref|ZP_07238828.1| peptide chain release factor 2 [Acinetobacter baumannii AB058] gi|301596660|ref|ZP_07241668.1| peptide chain release factor 2 [Acinetobacter baumannii AB059] Length = 201 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 103/200 (51%), Positives = 144/200 (72%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVN 244 SD R DTYRASGAGGQH+N Sbjct: 181 PSDVRTDTYRASGAGGQHIN 200 >gi|219684506|ref|ZP_03539449.1| peptide chain release factor 1 [Borrelia garinii PBr] gi|219671868|gb|EED28922.1| peptide chain release factor 1 [Borrelia garinii PBr] Length = 357 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 133/344 (38%), Positives = 207/344 (60%), Gaps = 15/344 (4%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCD 68 L ++A ++ L K +D +L +N + +++E HL+ I + K I ++ D Sbjct: 3 LEKLNSATSKIKSLEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEK-ILSQIND 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 N +LE +++ ++++ +L + + ++E+ Q + LL E DS + +E+ AG G Sbjct: 62 NKTILEKEDQQEMKELIKQELIDLDKKREDLEH-QIKILLLPQDENDSKNIIIEIRAGTG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +AN L MY +++E++K+KTE + ++ E G K IKG + + LK E G Sbjct: 121 GEEAALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ RI +SN R TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTT Sbjct: 181 VHRVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++ Sbjct: 240 DSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G G +IR+Y P + D R NI + + G+LD + Sbjct: 298 GSGDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLL 340 >gi|203284116|ref|YP_002221856.1| peptide chain release factor A [Borrelia duttonii Ly] gi|201083559|gb|ACH93150.1| peptide chain release factor A [Borrelia duttonii Ly] Length = 359 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 118/248 (47%), Positives = 165/248 (66%), Gaps = 10/248 (4%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D + +E+ AG GG E+ +A+ L MYT+++EK+K+KTE + ++ E G K + Sbjct: 107 ENDDKNIIIEIRAGTGGEEAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSF 166 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG + + LK E GVHR+ RI +SN + TS +++ V P V+D+ +IEI++ D RI Sbjct: 167 EIKGKDVFKKLKHESGVHRVQRIPITESNGKLQTSAATVAVLPEVEDT-DIEINDKDLRI 225 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-L 289 D YR+SGAGGQHVNTTDSAVRITH+PTG+V QCQ ERSQHKNK QA +LRA+LYELE L Sbjct: 226 DVYRSSGAGGQHVNTTDSAVRITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENL 285 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +K+E+ +N K ++G G +IR+Y P V D R NI +++ G+LD Sbjct: 286 KKQEQRSN---DRKQQVGSGDRSERIRTYNF-PQNRVTDHRANISLYKLEEIMQGELDSL 341 Query: 347 MKATLAIK 354 + TLA+K Sbjct: 342 LN-TLALK 348 >gi|51598456|ref|YP_072644.1| peptide chain release factor 1 [Borrelia garinii PBi] gi|61214604|sp|Q662G9|RF1_BORGA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|51573027|gb|AAU07052.1| peptide chain release factor 1 [Borrelia garinii PBi] Length = 357 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 131/341 (38%), Positives = 206/341 (60%), Gaps = 15/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71 ++A ++ + K +D +L +N + +++E +L+ I + K I ++ DN Sbjct: 6 LNSATSKIKLIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYEK-ILSQINDNKT 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129 +LE +++ ++++ +L + K ++E+ Q + LL E DS + +E+ AG GG E Sbjct: 65 ILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +AN L MY +++E++K+KTE + ++ E G K IKG + + LK E GVHR Sbjct: 124 AALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI +SN R TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSA Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 243 VRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P + D R NI + + G+LD + Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLL 340 >gi|291278533|ref|YP_003495368.1| peptide chain release factor RF-1 [Deferribacter desulfuricans SSM1] gi|290753235|dbj|BAI79612.1| peptide chain release factor RF-1 [Deferribacter desulfuricans SSM1] Length = 355 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 119/243 (48%), Positives = 159/243 (65%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A LLRMY R+AEK ++KTE ++ +D G K LLI Sbjct: 105 DEKNIYLEIRAGTGGDEATLFAADLLRMYMRYAEKHRWKTEIVDYNDTGVGGYKEVVLLI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ RI +S R HTS ++ V P DD +E+EI SD RID Sbjct: 165 KGKGAYSRLKFEGGGHRVQRIPVTESGGRIHTSACTVAVLPEADD-VEVEIDPSDLRIDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ KNK +A +L+AK+ E+E++K+ Sbjct: 224 FRASGAGGQHVNTTDSAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKAKILEMEIRKQ 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E I + K ++G G +IR+Y P V D R N+ + V++G+LD+ + A Sbjct: 284 QEA--IASNRKLQVGSGDRSERIRTYNF-PQNRVTDHRINLTLYNLDQVMEGELDEIIDA 340 Query: 350 TLA 352 +A Sbjct: 341 LIA 343 >gi|220927713|ref|YP_002504622.1| peptide chain release factor 1 [Clostridium cellulolyticum H10] gi|254790874|sp|B8I562|RF1_CLOCE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219998041|gb|ACL74642.1| peptide chain release factor 1 [Clostridium cellulolyticum H10] Length = 359 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 136/350 (38%), Positives = 204/350 (58%), Gaps = 16/350 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD A + R ++ K DP + N E K M+E L+ + +E + + + Sbjct: 1 MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKECSDLEEIVQKYREYTKVTKEIEE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125 LLE L++D ++Q+ Q KLEV +Q + L+ + D ND +E+ GA Sbjct: 61 ARELLEQTLDKDFREMVQQEFQEAQE-KLEVIKRQLKILIVPK-DPNDDKNVIVEIRGGA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A +L R ++AEK+++K E L+ + E G K I+G AY LK E Sbjct: 119 GGEEAALFAGVLFRAMAKYAEKKRWKYEILDSNPTELGGFKEVVFTIEGKGAYSRLKFES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S+ R HTS ++ V P V++ ++++I+ SD RIDTYRASGAGGQH+N Sbjct: 179 GVHRVQRVPSTESSGRIHTSTITVAVLPEVEE-VDVDINPSDLRIDTYRASGAGGQHINK 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSA+RITH+PTG+VV CQ ERSQHKNK +A +LR+KLY E+ + ++I + + K + Sbjct: 238 TDSAIRITHMPTGIVVSCQDERSQHKNKDKAMKILRSKLY--EIAQEQQINEVAQDRKNQ 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G G +IR+Y P V D R N+ VLDGDLD+ + A + Sbjct: 296 VGTGDRSERIRTYNY-PQGRVTDHRINLTLYKLEQVLDGDLDELIDALIT 344 >gi|203287654|ref|YP_002222669.1| peptide chain release factor A [Borrelia recurrentis A1] gi|201084874|gb|ACH94448.1| peptide chain release factor A [Borrelia recurrentis A1] Length = 359 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 139/349 (39%), Positives = 209/349 (59%), Gaps = 28/349 (8%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD-------RLCDNLILL 73 +++ L K +D +L +N E +++E +L+ IKE +D ++ +N +L Sbjct: 13 KKIKILEEKLQDVNLIKNQKEYSKIIKEYNYLEK----IKEKKDEYQHILNQINENQKIL 68 Query: 74 ELALEEDDCS---ILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTE 129 EED+ ++++ +L K E+E + L E D + +E+ AG GG E Sbjct: 69 S---EEDNLEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDENDDKNIIIEIRAGTGGEE 125 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A+ L MYT+++EK+K+KTE + + E G K + IKG + + LK E GVHR Sbjct: 126 AALFAHNLYEMYTKYSEKKKWKTELINFNKTELGGFKEVSFEIKGKDVFKKLKHESGVHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI +SN + TS +++ V P V+D+ +IEI++ D R D YR+SGAGGQHVNTTDSA Sbjct: 186 VQRIPITESNGKLQTSAATVAVLPEVEDT-DIEINDKDLRTDVYRSSGAGGQHVNTTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIGW 308 VRITH+PTG+V QCQ ERSQHKNK QA +LRA+LYELE L+K+E+ +N K ++G Sbjct: 245 VRITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKKQEQRSN---DRKQQVGS 301 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G +IR+Y P V D R NI +++ G+LD + TLA+K Sbjct: 302 GDRSERIRTYNF-PQNRVTDHRANISLYKLEEIMQGELDSLLN-TLALK 348 >gi|111115018|ref|YP_709636.1| peptide chain release factor 1 [Borrelia afzelii PKo] gi|119361512|sp|Q0SNW8|RF1_BORAP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110890292|gb|ABH01460.1| peptide chain release factor 1 [Borrelia afzelii PKo] Length = 357 Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 130/340 (38%), Positives = 205/340 (60%), Gaps = 13/340 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71 ++A R+ + K +D +L +N + +++E +L+ I + + I +++ DN Sbjct: 6 LNSATSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEY-ENILNQINDNKT 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130 +LE +++ ++++ +L + K +E++ + L E DS + +E+ AG GG E+ Sbjct: 65 ILEKEEQQEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGTGGEEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 125 ALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +SN R TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSAV Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 244 RITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P + D R NI + + G+LD + Sbjct: 302 RSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLL 340 >gi|168334105|ref|ZP_02692318.1| peptide chain release factor 1 [Epulopiscium sp. 'N.t. morphotype B'] Length = 356 Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 128/335 (38%), Positives = 202/335 (60%), Gaps = 11/335 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLILLELA 76 V + ++ K +P + + + + LM+E L + KE + L D+L++LE Sbjct: 9 VVKFENISAKVNEPAVIADQVTWRALMKEISTLSPIVEKYKEYKTVLTAIDDSLLMLEEK 68 Query: 77 LEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 L++D +++ +E SDN +R++ E + L + D + +E+ GAGG E+ +A Sbjct: 69 LDDDMLALVKEELSDNKKRVEPLEEELKILLLPTDPNDEKNVIVEIRGGAGGDEAALFAA 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY R+AE+ K+KTE ++I++ G K A ++KG AY LK E GVHR+ R+ Sbjct: 129 DLYRMYHRFAERSKWKTELMDINENGIGGFKEAIFMLKGDGAYSRLKYESGVHRVQRVPD 188 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S+ R HTS ++ + P +D +++E++ +D ++D +R+SG GGQ VNTTDSAVR+TH+ Sbjct: 189 TESSGRIHTSTVTVAIMPEAED-VDVEVNPNDVKVDVFRSSGNGGQSVNTTDSAVRLTHL 247 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV CQ E+SQ KNK +A +LRAKLYELEL K++ A I K+++G G +I Sbjct: 248 PTGIVVSCQDEKSQLKNKDKAMKVLRAKLYELELNKQK--ALIAAEKKSQVGTGDRSERI 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 R+Y P V D R + VLDGDL++ + Sbjct: 306 RTYNF-PQGRVTDHRVGLTVHKLEQVLDGDLEEII 339 >gi|303280341|ref|XP_003059463.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459299|gb|EEH56595.1| predicted protein [Micromonas pusilla CCMP1545] Length = 289 Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 117/280 (41%), Positives = 177/280 (63%), Gaps = 19/280 (6%) Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 D + E SD + ++ +E + LL G D+ A + ++AGAGGT++QDW+ ML R Sbjct: 10 DVPELASEVSDAVNALEGALEAWEARRLLGGTYDALGATVFIYAGAGGTDAQDWSEMLER 69 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS- 198 Y +WA++R F G+EAG+KS TL I+G AYG+L E+G HRLVR SP++ Sbjct: 70 CYLQWADRRGFAVRVEARTPGDEAGLKSVTLEIEGRYAYGYLASEKGTHRLVRTSPFNKG 129 Query: 199 -----NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R TSF+++ V P ++D IE + T R+ GAGGQ+VN ++AVR+ Sbjct: 130 AFSFIHATRQTSFAAVDVMPTLEDKIE---------VTTMRSGGAGGQNVNKVETAVRMK 180 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQ 311 H+PTG+VV+C++ERSQ N+A+A L+AKL + ++R ++A + G+ K E WG+Q Sbjct: 181 HLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVVKAE--WGQQ 238 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+YV PY+MVKD+RT +E + V++G LD+F A L Sbjct: 239 IRNYVFHPYKMVKDVRTGMETSDVEGVMNGKLDEFQNAWL 278 >gi|150021273|ref|YP_001306627.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429] gi|149793794|gb|ABR31242.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429] Length = 358 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 118/250 (47%), Positives = 159/250 (63%), Gaps = 7/250 (2%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L E + +LE+ AG GG E+ +A LLRMY R+ EK+ FK E ++ + + G K Sbjct: 95 LPKNEYSGKNVFLEIRAGTGGEEAALFAADLLRMYLRYVEKKNFKAEIVDENKTDLGGYK 154 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 + IKG N LK E GVHR+ R+ +S R HTS +++ V P V + +EIEI+ S Sbjct: 155 EVVVRIKGKNVGNLLKYESGVHRVQRVPTTESGGRIHTSTATVAVLPEVSN-VEIEINPS 213 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQ+VN T+SAVRITHIPTG+VV CQ ERSQ +NK QA N+LRA+LY+ Sbjct: 214 DIRIDTYRASGAGGQYVNKTESAVRITHIPTGIVVTCQSERSQLQNKEQAMNILRARLYK 273 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L+L+ E+ I + K++IG G +IR+Y P V D R N + VLDG+L Sbjct: 274 LKLE--EQAKKISSNRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYNLQAVLDGEL 330 Query: 344 DDFMKATLAI 353 D+F+ + I Sbjct: 331 DEFITRLMRI 340 >gi|15594541|ref|NP_212330.1| peptide chain release factor 1 [Borrelia burgdorferi B31] gi|216264551|ref|ZP_03436543.1| peptide chain release factor 1 [Borrelia burgdorferi 156a] gi|218249543|ref|YP_002374724.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7] gi|221217544|ref|ZP_03589014.1| peptide chain release factor 1 [Borrelia burgdorferi 72a] gi|223889241|ref|ZP_03623829.1| peptide chain release factor 1 [Borrelia burgdorferi 64b] gi|224532854|ref|ZP_03673469.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23] gi|224534094|ref|ZP_03674677.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a] gi|225549805|ref|ZP_03770769.1| peptide chain release factor 1 [Borrelia burgdorferi 118a] gi|226321514|ref|ZP_03797040.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26] gi|3914620|sp|O51214|RF1_BORBU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739097|sp|B7J1C9|RF1_BORBZ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|2688096|gb|AAC66592.1| peptide chain release factor 1 (prfA) [Borrelia burgdorferi B31] gi|215981024|gb|EEC21831.1| peptide chain release factor 1 [Borrelia burgdorferi 156a] gi|218164731|gb|ACK74792.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7] gi|221192607|gb|EEE18824.1| peptide chain release factor 1 [Borrelia burgdorferi 72a] gi|223885274|gb|EEF56376.1| peptide chain release factor 1 [Borrelia burgdorferi 64b] gi|224512243|gb|EEF82629.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23] gi|224512793|gb|EEF83161.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a] gi|225369613|gb|EEG99062.1| peptide chain release factor 1 [Borrelia burgdorferi 118a] gi|226232703|gb|EEH31456.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26] gi|312148526|gb|ADQ31185.1| peptide chain release factor 1 [Borrelia burgdorferi JD1] Length = 357 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 130/341 (38%), Positives = 205/341 (60%), Gaps = 15/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71 ++A ++ + K +D +L ++ + +++E +L+ I + K I ++ D Sbjct: 6 LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEK-ILSQINDTKT 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129 +LE +++ ++++ +L + K ++E+ Q + LL E DS + +E+ AG GG E Sbjct: 65 ILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI +SN R TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSA Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 243 VRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P + D R NI + + G+LD + Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLL 340 >gi|328466430|gb|EGF37577.1| peptide chain release factor 2 [Lactobacillus rhamnosus MTCC 5462] Length = 189 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 99/186 (53%), Positives = 135/186 (72%) Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 +E D + E L+ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW +ML Sbjct: 4 DEPDPDLQHEEETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSML 63 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +RMY RWA++ FK E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+D Sbjct: 64 MRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFD 123 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S RRHTSF+S+ V P +D+SIE++I D +++ +R+SGAGGQH+N T SAVR+ H+PT Sbjct: 124 SAGRRHTSFASVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPT 183 Query: 258 GVVVQC 263 G+V Sbjct: 184 GIVTSS 189 >gi|216263966|ref|ZP_03435960.1| peptide chain release factor 1 [Borrelia afzelii ACA-1] gi|215980010|gb|EEC20832.1| peptide chain release factor 1 [Borrelia afzelii ACA-1] Length = 357 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 129/340 (37%), Positives = 204/340 (60%), Gaps = 13/340 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71 ++ R+ + K +D +L +N + +++E +L+ I + + I +++ DN Sbjct: 6 LNSVTSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEY-ENILNQINDNKT 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130 +LE +++ ++++ +L + K +E++ + L E DS + +E+ AG GG E+ Sbjct: 65 ILEKEEQQEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGTGGEEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 125 ALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +SN R TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSAV Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 244 RITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P + D R NI + + G+LD + Sbjct: 302 RSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLL 340 >gi|225552361|ref|ZP_03773301.1| peptide chain release factor 1 [Borrelia sp. SV1] gi|225371359|gb|EEH00789.1| peptide chain release factor 1 [Borrelia sp. SV1] Length = 357 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 130/341 (38%), Positives = 205/341 (60%), Gaps = 15/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71 ++A ++ + K +D +L ++ + +++E +L+ I + K I ++ D Sbjct: 6 LNSATSKIKLIEEKLQDINLIKDQKKYSKIVKEYTYLEKINTKKIEYEK-ILSQINDTKT 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129 +LE +++ ++++ +L + K ++E+ Q + LL E DS + +E+ AG GG E Sbjct: 65 ILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI +SN R TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSA Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 243 VRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P + D R NI + + G+LD + Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYKLEEFIQGELDPLL 340 >gi|326203238|ref|ZP_08193103.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782] gi|325986496|gb|EGD47327.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782] Length = 359 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 133/350 (38%), Positives = 206/350 (58%), Gaps = 16/350 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD A + R ++ K DP + N E K M+E L+ + +E + + + Sbjct: 1 MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKEYSDLEEIVQKYREYTKVSKEIEE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125 LL+ L++D ++Q+ Q KLEV +Q + L+ + D ND +E+ GA Sbjct: 61 ARELLDQTLDKDFREMVQQEFQEAQE-KLEVIKRQLKILIVPK-DPNDDKNVIVEIRGGA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A +L R T++AEK+++K E ++ + E G K I+G AY LK E Sbjct: 119 GGEEAALFAGVLFRAMTKYAEKKRWKYEIMDSNPTELGGFKEVVFSIEGKGAYSRLKFES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S+ R HTS ++ V P V++ ++++I+ +D RIDTYRASGAGGQH+N Sbjct: 179 GVHRVQRVPSTESSGRIHTSTITVAVLPEVEE-VDVDINPNDLRIDTYRASGAGGQHINK 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSA+RITH+P+G+VV CQ ERSQHKNK +A +LR+KLY E+ + ++I + + K++ Sbjct: 238 TDSAIRITHMPSGIVVSCQDERSQHKNKDRAMKILRSKLY--EIAQEQQINEVAQDRKSQ 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G G +IR+Y P V D R N+ VLDGDLD+ + A + Sbjct: 296 VGTGDRSERIRTYNY-PQGRVTDHRINLTLYKLEQVLDGDLDELIDALIT 344 >gi|182420270|ref|ZP_02951499.1| peptide chain release factor 1 [Clostridium butyricum 5521] gi|237666557|ref|ZP_04526542.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375865|gb|EDT73457.1| peptide chain release factor 1 [Clostridium butyricum 5521] gi|237657756|gb|EEP55311.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 360 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 194/334 (58%), Gaps = 11/334 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ K DP + QN E + L +E L+ ++ KE + D E+ EE+D + Sbjct: 16 LSVKISDPSIMQNQNEWRKLCKEHADLEIIVNAYKEYKKVTEDLEANKEMLSEENDKEMR 75 Query: 86 QETSDNLQRI-KLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141 + S+ + + K EVE + +L D ND ++E+ GAGG E+ +A L RMY Sbjct: 76 EMLSEEISDLTKREVELENHIQILLLPKDPNDDKNVFVEIRGGAGGEEAALFAYNLFRMY 135 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TR+AE +++ E + +++ + G K +IKG AY LK E GVHR+ R+ +S+ R Sbjct: 136 TRYAETQRWAVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVPDTESSGR 195 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS S++ V P VDD +EIEISE D RID +RASG GGQ VNTTDSAVRITH+P+G+VV Sbjct: 196 IHTSTSTVAVLPEVDD-VEIEISEKDLRIDVFRASGNGGQCVNTTDSAVRITHLPSGLVV 254 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 CQ E+SQ KNK +A +L+++LY E +RE I E K+++G G +IR+Y Sbjct: 255 SCQDEKSQLKNKEKAMKVLKSRLY--EQAERERAEGIAEDRKSQVGTGDRSERIRTYNY- 311 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + L+GD+D+ + A + Sbjct: 312 PQGRVTDHRIGLTLYKLETFLNGDIDEMINALIT 345 >gi|227486771|ref|ZP_03917087.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC 51172] gi|227235241|gb|EEI85256.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC 51172] Length = 358 Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 133/337 (39%), Positives = 196/337 (58%), Gaps = 17/337 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELALEEDDC 82 L K DP + ++ + + + +E L + +EI +D + +N EL E DD Sbjct: 15 LEAKLADPAVLADMDQFRKVSKEYNSLKPVVEKYEEIKNAEDTIAENQ---ELINEADDQ 71 Query: 83 SILQETSDNLQ--RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++Q D ++ + KLEV + + LL D D +E+ GAGG E+ +A L Sbjct: 72 DMIQMLKDEIEENKDKLEVLKDEMQILLIPKDPNDEKDVIVEIRPGAGGDEAGLFAGDLY 131 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY +A+K FKTE +E++ GIK AT +++G AY LK E GVHR+ R+ +S Sbjct: 132 RMYNMYADKAGFKTEEIEVNTQGVGGIKDATFVVRGEGAYSKLKYESGVHRVQRVPETES 191 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS +++ V P VD+ +E+ I +D R D YR+SG GGQ VNTTDSAVR+THIPTG Sbjct: 192 GGRIHTSTATVAVLPEVDE-VELHIDPNDIRTDVYRSSGNGGQSVNTTDSAVRLTHIPTG 250 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VV Q E+SQ KNK +A +LRA+LYELE QKR + I ++ K+++G G +IR+Y Sbjct: 251 LVVAIQDEKSQIKNKEKAMRVLRARLYELEEQKRNK--EIADNRKSQVGTGDRSERIRTY 308 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P + D R N D L+GD++D + + +A Sbjct: 309 NF-PQGRITDHRINKTIYQLDDFLNGDIEDMINSLIA 344 >gi|225548553|ref|ZP_03769601.1| peptide chain release factor 1 [Borrelia burgdorferi 94a] gi|225370816|gb|EEH00251.1| peptide chain release factor 1 [Borrelia burgdorferi 94a] Length = 357 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 113/244 (46%), Positives = 156/244 (63%), Gaps = 7/244 (2%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L E DS + +E+ AG GG E+ +AN L MY +++EK+K+KTE + ++ E G K Sbjct: 101 LPQDENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFK 160 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 IKG + + LK E GVHR+ RI +SN R TS +++ V P ++++ EI+I+E Sbjct: 161 EIIFEIKGKDVFKKLKYESGVHRVQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEK 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YR+SGAGGQHVNTTDSAVRITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE Sbjct: 220 DLRIDVYRSSGAGGQHVNTTDSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYE 279 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 E K++E + K ++G G +IR+Y P + D R NI + + G+L Sbjct: 280 FEDSKKQE--QRSSNRKQQVGSGDRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGEL 336 Query: 344 DDFM 347 D + Sbjct: 337 DPLL 340 >gi|217077770|ref|YP_002335488.1| peptide chain release factor 1 [Thermosipho africanus TCF52B] gi|217037625|gb|ACJ76147.1| peptide chain release factor 1 [Thermosipho africanus TCF52B] Length = 358 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 117/250 (46%), Positives = 160/250 (64%), Gaps = 7/250 (2%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L E + +LE+ AG GG E+ +A LLRMY R+ EK+ FK E ++ + + G K Sbjct: 95 LPESEYSGKNVFLEIRAGTGGEEAALFAADLLRMYLRYVEKKNFKAEIVDENKTDLGGYK 154 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 + IKG N LK E GVHR+ R+ +S R HTS +++ V P V + +EIEI+ S Sbjct: 155 EVVIKIKGKNVGNLLKYESGVHRVQRVPTTESGGRIHTSTATVAVLPEVSN-VEIEINPS 213 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQ+VN T+SAVRITHIPTG+VV CQ ERSQ +NK QA N+LRA+L++ Sbjct: 214 DIRIDTYRASGAGGQYVNKTESAVRITHIPTGIVVTCQSERSQLQNKEQAMNILRARLFK 273 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L+L+++E I + K++IG G +IR+Y P V D R N + VLDG+L Sbjct: 274 LKLEEQER--KISSNRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYNLQAVLDGEL 330 Query: 344 DDFMKATLAI 353 D+F+ + I Sbjct: 331 DEFITRLMRI 340 >gi|153007050|ref|YP_001381375.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5] gi|166223527|sp|A7HI45|RF1_ANADF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|152030623|gb|ABS28391.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5] Length = 372 Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 124/336 (36%), Positives = 196/336 (58%), Gaps = 12/336 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QR L DP + N + + +ER L+ + ++ + +L ++ E LEE Sbjct: 15 QRFEELTALLSDPSVASNGDRFRKVSKERASLEPTVEALRAYR-KLVTDIGDNEALLEEK 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANM 136 D + + + L +++ +V+ + + L AD D LE+ AGAGG E+ +A Sbjct: 74 DPDLREMAKEELAQLRPQVDPAEEQLKLYLVPKDPADEKDVILEIRAGAGGDEAGLFAAE 133 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R+AE+R ++TE + G G+K T+ I G + Y WLK E GVHR+ R+ Sbjct: 134 LLRMYLRYAERRGWRTEVADTSAGNLGGVKDVTVNIAGDSVYSWLKFESGVHRVQRVPAT 193 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P +D I+I++S +D +D +R++G+GGQ VNTTDSAVR+TH P Sbjct: 194 EAQGRIHTSTVTVAVMPEAED-IDIQVSPADIEMDVFRSTGSGGQSVNTTDSAVRLTHKP 252 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG++V+CQQE+SQ KN+ A MLRAKLYE+EL+++ + + K+++G G +IR Sbjct: 253 TGIIVKCQQEKSQLKNRNMAMRMLRAKLYEIELERQRSARDA--ARKSQVGTGDRSEKIR 310 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +Y P + D R N + + V+DGD+ D + A Sbjct: 311 TYNF-PQDRLTDHRINYTRHNLPAVMDGDVQDVIDA 345 >gi|195941927|ref|ZP_03087309.1| peptide chain release factor 1 [Borrelia burgdorferi 80a] Length = 357 Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 129/341 (37%), Positives = 204/341 (59%), Gaps = 15/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71 ++ ++ + K +D +L ++ + +++E +L+ I + K I ++ D Sbjct: 6 LNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEK-ILSQINDTKT 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129 +LE +++ ++++ +L + K ++E+ Q + LL E DS + +E+ AG GG E Sbjct: 65 ILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI +SN R TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSA Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 243 VRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P + D R NI + + G+LD + Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYRLEEFMQGELDPLL 340 >gi|303239757|ref|ZP_07326281.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2] gi|302592694|gb|EFL62418.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2] Length = 360 Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 133/350 (38%), Positives = 204/350 (58%), Gaps = 18/350 (5%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68 +FD A + R +N K DP + +N E + LM+E Q L K++ + D Sbjct: 1 MFDRLQAAENRYEEMNHKLSDPAVIENQDEYRKLMKEHAELQELVGKYGEYKKVTQEIAD 60 Query: 69 NLILLELALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 LL L++D + L+E + L++IK E+ + L D D +E+ G Sbjct: 61 AKELLNDKLDKDFREMVEMELKEAEEGLEKIKKEL---KILLLPKDPNDEKDVIVEIRGG 117 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A +L RMYTR+AE+ +KTE L+ + E G K I+G A+ LK E Sbjct: 118 AGGEEAALFAGVLFRMYTRYAERCGWKTEMLDSNPTEIGGFKEVVFAIEGNGAFSKLKFE 177 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ RI ++N R HTS ++ V P V++ ++++I+ +D RIDTYRASGAGGQH+N Sbjct: 178 SGVHRVQRIPETEANGRIHTSTVTVAVLPEVEE-VDVDINPNDLRIDTYRASGAGGQHIN 236 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSA+RITHIPTG+VV CQ +RSQ+KNK +A +LR+KLYE+ +++ + I ++ K Sbjct: 237 KTDSAIRITHIPTGLVVCCQDQRSQYKNKDKAMRVLRSKLYEIAQEQQN--SEIAQARKG 294 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++G G +IR+Y P + D R + +L+GD+D+ + A + Sbjct: 295 QVGTGDRSERIRTYNY-PQGRMTDHRIGLTLYKLESILEGDMDEVIDALI 343 >gi|219123603|ref|XP_002182112.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406713|gb|EEC46652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 406 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 122/281 (43%), Positives = 168/281 (59%), Gaps = 11/281 (3%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 IL +LA EE +L E + R++ + + + E LLSG D A L + AGAGGTE+ Sbjct: 105 ILSQLASEER-AMLLDEFRSAIARLREDSDRFELELLLSGPYDHAPARLLLTAGAGGTEA 163 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW L RMY R E + GE G KS LL+ G NAYGWL+GE+G HR+ Sbjct: 164 NDWVGDLKRMYQRHCEAMGLSCVVQDEQAGEAVGYKSVELLVSGDNAYGWLQGEKGAHRM 223 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVV----DDSI--EIEISESDCRIDTYRASGAGGQHVN 244 VR+SP+++N++R T+F+ + V P + DD+ I++ ES+ I T RA G GGQ+VN Sbjct: 224 VRLSPFNANNKRQTTFAGVDVAPDILNQDDDAYWNTIDVPESELEITTMRAGGKGGQNVN 283 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SS 302 +SAVRI H+P+G+ V+C QERSQ NK A L+A+L L + + + +A I E Sbjct: 284 KVNSAVRIKHLPSGLQVKCAQERSQSMNKNIALKRLKAQL--LAIVQEQRVAEIKEIRGD 341 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 E WG QIR+YV PY+MVKD RT E ++ +DGDL Sbjct: 342 MVEASWGAQIRNYVFHPYKMVKDQRTGWETSNVQAFMDGDL 382 >gi|119952993|ref|YP_945202.1| peptide chain release factor 1 [Borrelia turicatae 91E135] gi|254790864|sp|A1QYZ0|RF1_BORT9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119861764|gb|AAX17532.1| bacterial peptide chain release factor 1 [Borrelia turicatae 91E135] Length = 357 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 138/338 (40%), Positives = 201/338 (59%), Gaps = 31/338 (9%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----------NAISFIKEIQDRLCD--N 69 ++ L K +D +L +N E +++E +L+ N IS I E Q L + N Sbjct: 12 KIKILEEKLQDTNLIKNQKEYAKVIKEYNYLEKIKEKKDEYENIISQIDENQKILSEEEN 71 Query: 70 LILLELALEEDDCSILQE-TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L + EL I QE T NL++ ++E K L E D+ + +E+ AG GG Sbjct: 72 LEMKEL--------IKQELTHLNLKKDEIEHTIKIL-LLHQDENDNKNIIIEIRAGTGGE 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ L MYT+++EK+K+KTE + ++ E G K + IKG + LK E GVH Sbjct: 123 EAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKEVFKKLKHESGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +SN R TS +++ V P V+++ +IEI+E D RID YR+SGAGGQHVNTTDS Sbjct: 183 RVQRVPITESNGRLQTSAATVAVLPEVEET-DIEINEKDLRIDVYRSSGAGGQHVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSKTEIG 307 AVRITH+PTG+VVQCQ ERSQHKNK QA +LRA+LY+ E L+K+E+ +N K ++G Sbjct: 242 AVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYKFEDLKKQEQRSN---DRKQQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 G +IR+Y P V + R NI +++ G+ Sbjct: 299 SGDRSERIRTYNF-PQNRVTEHRANISLYKLEEIMQGE 335 >gi|161833777|ref|YP_001597973.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS] gi|152206267|gb|ABS30577.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS] Length = 214 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 96/216 (44%), Positives = 149/216 (68%), Gaps = 4/216 (1%) Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 ML RMY WAEK FK + + G+ G++S T ++KG + +G+LKGE GVHRLVRISP Sbjct: 1 MLYRMYIMWAEKHNFKIKKINSLQGDIIGLRSITFIVKGLSPFGYLKGENGVHRLVRISP 60 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +D NS+RHTSF+S+++YP++DD I I+I+ SD +T+R+ G+GGQ+VN +S VR+ H Sbjct: 61 FD-NSKRHTSFASVYIYPLIDDDINIKINTSDISWNTFRSRGSGGQNVNKVESGVRLHHH 119 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 PT ++++ + +SQ NK +A +L+++L+ +E + + N K +I W QIR+Y Sbjct: 120 PTNIIIENSETKSQFNNKIKALKLLKSRLFYIEKKSKNTTCN---KLKKKIEWSSQIRNY 176 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ PY++VKDLRT E + VL+G++D F+K L Sbjct: 177 IMHPYKLVKDLRTGYETSDIESVLNGEIDIFLKKNL 212 >gi|157825817|ref|YP_001493537.1| peptide chain release factor 1 [Rickettsia akari str. Hartford] gi|166223595|sp|A8GNQ4|RF1_RICAH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157799775|gb|ABV75029.1| peptide chain release factor 1 [Rickettsia akari str. Hartford] Length = 355 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 138/349 (39%), Positives = 204/349 (58%), Gaps = 29/349 (8%) Query: 16 WDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 +DN ++LS F+ E L V++ K + + L+ A +F E+ D Sbjct: 14 YDNLGKKLSSGIMGDEFVKASKEYAELEDVVVKIKEYNKAKSELEEANNFKLELG---FD 70 Query: 69 NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 N L A+ ED+ IL+ + L+R +K+ + L +ADS A +EV AG+GG Sbjct: 71 NATL---AMIEDEIHILENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L MY R+AE + ++ E L I D G K A+ IKG + + LK E GV Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ ++I+I + D RIDTYRASGAGGQHVNTTD Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E + +E+ +S + +IG Sbjct: 240 SAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRNKEQ--ERADSRRGQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 G +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFIEALIA 345 >gi|28210063|ref|NP_781007.1| peptide chain release factor 1 [Clostridium tetani E88] gi|32171526|sp|Q898Y5|RF1_CLOTE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|28202498|gb|AAO34944.1| bacterial peptide chain release factor 1 [Clostridium tetani E88] Length = 355 Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 130/351 (37%), Positives = 211/351 (60%), Gaps = 24/351 (6%) Query: 22 RLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLI 71 RL+F+ K E DP + Q+ E + L +E ++ ++ KE ++ L DN Sbjct: 4 RLNFIENKYEELSIKISDPTVMQDQKEWQKLCKEHSDMETIVTTYKEYKEVLQSIEDNKE 63 Query: 72 LLELALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGG 127 +L+ +E++ ++QE L QR++ E +Q +L D ND ++E+ AGAGG Sbjct: 64 MLKEDIEQELRDMVQEDIKELEQRVQ---ELEQELKMLLVPKDPNDEKNVFIEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE+ +KTEA+ +++ + G K +++G AY LK E GV Sbjct: 121 DEAALFAANLFRMYTRYAERHNWKTEAVSVNETDIGGFKEIVFMVRGKGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P V+D +++EI+++D R+D YRASG GGQ VNTTD Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLPEVED-VDVEINQNDLRVDVYRASGHGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+G+VV CQ E+SQ KNK +A +L+++LY++ +R A+I E K+++G Sbjct: 240 SAVRITHLPSGLVVTCQDEKSQLKNKEKAMKVLKSRLYDMLESERS--ASIAEDRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + LDGD+++ + + +++ Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLYKLESFLDGDIEEMIDGLITVEQ 347 >gi|312148979|gb|ADQ29050.1| peptide chain release factor 1 [Borrelia burgdorferi N40] Length = 357 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 128/341 (37%), Positives = 204/341 (59%), Gaps = 15/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71 ++ ++ + K +D +L ++ + +++E +L+ I + K I ++ D Sbjct: 6 LNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEK-ILSQINDTKT 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129 +LE +++ ++++ +L + K ++E+ Q + LL E DS + +E+ AG GG E Sbjct: 65 ILEKEDQQEMKELIKQELIDLDKKKEDLEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI +SN R TS +++ V P ++++ EI+I+E D RID YR+SGAGGQHVNTTDSA Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEET-EIDINEKDLRIDVYRSSGAGGQHVNTTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ ERSQ+KNK QA +LRA+LYE E K++E + K ++G G Sbjct: 243 VRITHLPTGIVVQCQNERSQYKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P + D R NI + + G+LD + Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLL 340 >gi|93279782|pdb|2FVO|A Chain A, Docking Of The Modified Rf1 X-Ray Structure Into The Low Resolution Cryo-Em Map Of E.Coli 70s Ribosome Bound With Rf1 Length = 333 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 162/250 (64%), Gaps = 8/250 (3%) Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 Y++ LLS EA S+ A +E+ G GG E+ +A L RMYTR+AE++ + E EIH+ Sbjct: 73 YQELLFLLSPEA-SDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHET 131 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 + GI+ +KG NAYG LK E GVHR+ R+ +S R HTS +++ V P +++ + Sbjct: 132 DLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEK-D 190 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 IEI D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERSQ++NK A +L Sbjct: 191 IEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRIL 250 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 RA+LY+L+ +++E I + K++IG G +IR+Y P V D R N + Sbjct: 251 RARLYQLQKEQKER--EISQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQE 307 Query: 338 VLDGDLDDFM 347 +LDGDLD+ + Sbjct: 308 ILDGDLDEII 317 >gi|15644115|ref|NP_229164.1| peptide chain release factor 1 [Thermotoga maritima MSB8] gi|7388056|sp|Q9X183|RF1_THEMA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52695394|pdb|1RQ0|A Chain A, Crystal Structure Of Peptide Releasing Factor 1 gi|52695395|pdb|1RQ0|B Chain B, Crystal Structure Of Peptide Releasing Factor 1 gi|52695396|pdb|1RQ0|C Chain C, Crystal Structure Of Peptide Releasing Factor 1 gi|4981923|gb|AAD36433.1|AE001790_5 peptide chain release factor RF-1 [Thermotoga maritima MSB8] Length = 342 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 162/250 (64%), Gaps = 8/250 (3%) Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 Y++ LLS EA S+ A +E+ G GG E+ +A L RMYTR+AE++ + E EIH+ Sbjct: 73 YQELLFLLSPEA-SDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHET 131 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 + GI+ +KG NAYG LK E GVHR+ R+ +S R HTS +++ V P +++ + Sbjct: 132 DLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEK-D 190 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 IEI D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERSQ++NK A +L Sbjct: 191 IEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRIL 250 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 RA+LY+L+ +++E I + K++IG G +IR+Y P V D R N + Sbjct: 251 RARLYQLQKEQKER--EISQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQE 307 Query: 338 VLDGDLDDFM 347 +LDGDLD+ + Sbjct: 308 ILDGDLDEII 317 >gi|323445681|gb|EGB02173.1| hypothetical protein AURANDRAFT_35500 [Aureococcus anophagefferens] Length = 268 Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 111/257 (43%), Positives = 162/257 (63%), Gaps = 11/257 (4%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + E+ ++G D D LE+ AGAGG ++Q+W M+ RMY R+ EKR F E +G+ Sbjct: 1 ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60 Query: 163 AG-IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIE 220 G +K +L I+G NA+G +GE+G HRLVR SP++S ++R TSF+S+ P + DD + Sbjct: 61 PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120 Query: 221 I-----EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + E+ +D + T RA GAGGQ+VN ++AVR+TH+PTG+ V+C +ER+Q NKA Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRMTHVPTGLRVRCARERTQGANKAI 180 Query: 276 AWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A MLRAKL + Q+ +A+I + +G +RSYVL PY++VKD + E Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADI-RGDRVAADFGASVRSYVLHPYKLVKDDKH--ETPH 237 Query: 335 PSDVLDGDLDDFMKATL 351 +DVLDGDL F+ A L Sbjct: 238 ATDVLDGDLGPFLDAEL 254 >gi|269792432|ref|YP_003317336.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100067|gb|ACZ19054.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 357 Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 129/332 (38%), Positives = 193/332 (58%), Gaps = 14/332 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + ++ DP + NV E + L R L + +E + ++ +L + LE+DD + Sbjct: 17 IESRMADPEISNNVQEMQSLSRRHSELYPVVQAFREYR-KVMRSLEEAQELLEQDDEEMR 75 Query: 86 QETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 Q + +QR+ LE + K L D + +E+ AGAGG E+ +A L RM Sbjct: 76 QLAKEEVQRLSDMLPGLEQDLKVL-LLPRDPNDHKNVIIEIRAGAGGDEAALFAADLFRM 134 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+ E++ ++ E +E+++ G K L+KG AY LK E GVHR+ RI +++ Sbjct: 135 YTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGEGAYSKLKFESGVHRVQRIPVTEASG 194 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P +D ++++I D +IDTYRASGAGGQ+VN TDSAVRITHIPTG+V Sbjct: 195 RIHTSTATVAVLPEAED-VDVQIRPEDLKIDTYRASGAGGQYVNMTDSAVRITHIPTGLV 253 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ ERSQ KN+A+A +LRA+LY+ ELQK++ A + K ++G G +IR+Y Sbjct: 254 VTCQDERSQLKNRAKAMQLLRARLYDQELQKQQ--AQMAAERKGQVGTGDRSERIRTYNY 311 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P + D R VLDGDL + ++A Sbjct: 312 -PQNRLTDHRIGFTLYKLDQVLDGDLYELIEA 342 >gi|329913866|ref|ZP_08275999.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium IMCC9480] gi|327545272|gb|EGF30526.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium IMCC9480] Length = 164 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 99/161 (61%), Positives = 130/161 (80%), Gaps = 1/161 (0%) Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 +R SP+DS + RHTSFSS++VYP VDDS+EI+I+ +D R+DTYRASGAGGQH+N TDSAV Sbjct: 1 MRKSPFDSANGRHTSFSSLFVYPEVDDSLEIDINPADVRVDTYRASGAGGQHINKTDSAV 60 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+VVQCQ +RSQH+N+A+AW ML+++LYE E++KR E SKT+IGWG Sbjct: 61 RLTHGPTGIVVQCQNDRSQHRNRAEAWAMLKSRLYEHEMRKRMSDQQKLEDSKTDIGWGH 120 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRT+ E + VLDGD+D+F+ A+L Sbjct: 121 QIRSYVLDQSR-IKDLRTSFETGNTKAVLDGDIDEFIAASL 160 >gi|254520297|ref|ZP_05132353.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA] gi|226914046|gb|EEH99247.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA] Length = 361 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 131/333 (39%), Positives = 191/333 (57%), Gaps = 11/333 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ K DP + N E + L +E L+ ++ KE + + D E+ EE D + Sbjct: 16 LSVKISDPSIMANQNEWRKLCKEHADLEVIVTAYKEYRTVIDDLAANKEMLAEESDREMR 75 Query: 86 QETSDNLQRIKL-EVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141 + S+ + + E E ++ +L D ND ++E+ GAGG E+ +A L RMY Sbjct: 76 EMLSEEISDLTAREGELEKHIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFAANLFRMY 135 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TR+AE +++ E + ++ + G K +IKG AY LK E GVHR+ R+ +S+ R Sbjct: 136 TRYAETQRWSVELMSANETDIGGFKEVVFMIKGSGAYSKLKYESGVHRVQRVPDTESSGR 195 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P VDD +EIEI+E D RID YR+SG GGQ VNTTDSAVRITHIPTGVVV Sbjct: 196 IHTSTATVAVLPEVDD-VEIEINEKDLRIDVYRSSGNGGQCVNTTDSAVRITHIPTGVVV 254 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 CQ E+SQ KNK +A +LR++LYE +R A I E K+++G G +IR+Y Sbjct: 255 ACQDEKSQLKNKEKAMKVLRSRLYEAAEAERN--AGIAEDRKSQVGSGDRSERIRTYNY- 311 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V D R + L+GD+++ + A + Sbjct: 312 PQGRVTDHRIGLTLYKLESYLNGDIEEVINALI 344 >gi|120555272|ref|YP_959623.1| peptide chain release factor 1 [Marinobacter aquaeolei VT8] gi|166223568|sp|A1U367|RF1_MARAV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120325121|gb|ABM19436.1| bacterial peptide chain release factor 1 (bRF-1) [Marinobacter aquaeolei VT8] Length = 363 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 104/235 (44%), Positives = 157/235 (66%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +LE+ AG GG E+ +A L RMY+R+AEKR+++ E L ++GE G K + Sbjct: 109 DTKNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAEKRRWQVEVLSENEGEHGGFKEIIARL 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P D++ +EI+++D R+DT Sbjct: 169 SGDGVYGTLKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A ++L ++L EL+K+ Sbjct: 229 FRSSGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAELEKQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ ++ E+ K+ +G G +IR+Y P V D R N+ +V+ GDLD Sbjct: 289 QK--SMAETRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGDLD 340 >gi|302875888|ref|YP_003844521.1| peptide chain release factor 1 [Clostridium cellulovorans 743B] gi|307689321|ref|ZP_07631767.1| peptide chain release factor 1 [Clostridium cellulovorans 743B] gi|302578745|gb|ADL52757.1| peptide chain release factor 1 [Clostridium cellulovorans 743B] Length = 358 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 141/358 (39%), Positives = 196/358 (54%), Gaps = 39/358 (10%) Query: 20 VQRLSF-------LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE----------- 61 ++RL+F L+ K DP + N E + L +E L ++ KE Sbjct: 2 LERLNFIENKYDELSIKISDPSIMSNQKEWQKLCKEHSDLGIVVNKYKEYKKTIEDIEDN 61 Query: 62 ---IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 IQD D L ELA EE + IL+ + RI L L D + Sbjct: 62 KEMIQDGSLDPE-LKELASEEIKELEILKNKYEEELRILL---------LPKDPNDDKNV 111 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 Y+E+ AGAGG E+ +AN L RMY R+AE + E + I+ + GIK ++IKG A Sbjct: 112 YVEIRAGAGGEEAALFANNLTRMYARYAETHGCRVETISINPTDLGGIKEIVMMIKGTGA 171 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E GVHR+ R+ +S+ R HTS +++ + P VDD +EIEIS +D RID +RASG Sbjct: 172 YSKLKYESGVHRVQRVPDTESSGRIHTSTATVAIMPEVDD-VEIEISANDLRIDVFRASG 230 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNK +A N+L+A+L+E +R A+ Sbjct: 231 HGGQCVNTTDSAVRITHLPTGIVVSCQDEKSQLKNKEKALNVLKARLFEKAESERS--AS 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 I E K+++G G +IR+Y P V D R + LDG +D+ + A + Sbjct: 289 IAEDRKSQVGTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSFLDGAIDEVINALIT 345 >gi|126665163|ref|ZP_01736146.1| peptide chain release factor 1 [Marinobacter sp. ELB17] gi|126630533|gb|EBA01148.1| peptide chain release factor 1 [Marinobacter sp. ELB17] Length = 364 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 105/242 (43%), Positives = 156/242 (64%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY+R+AE+R+++ E L +GE G K + Sbjct: 111 DGKNVFLEVRAGTGGDEAAIFAGDLFRMYSRFAERRRWQVEILSASEGEHGGYKEVIARV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ +S R HTS ++ V P D++ +EI++ D R+DT Sbjct: 171 AGSGVYGTLKFESGVHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A ++L ++L +E ++ Sbjct: 231 FRASGAGGQHVNKTDSAIRITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETERA 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + ++ E+ K+ +G G +IR+Y P V D R N+ +V+ GDLD +K Sbjct: 291 HQ--SMAETRKSLVGSGDRSERIRTYNF-PQSRVTDHRINLTLYKLDEVIAGDLDSVVKP 347 Query: 350 TL 351 L Sbjct: 348 LL 349 >gi|187935755|ref|YP_001884696.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund 17B] gi|238691625|sp|B2TJY5|RF1_CLOBB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|187723908|gb|ACD25129.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund 17B] Length = 360 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 128/335 (38%), Positives = 198/335 (59%), Gaps = 13/335 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD---C 82 L+ K DP + QN E + L +E+ L+ ++ KE + + D + E+ +E D Sbjct: 16 LSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSDESDREMK 75 Query: 83 SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 +L E +L + ++E+E K+ + LL D + ++E+ GAGG E+ +A L RM Sbjct: 76 EMLNEEIASLSQREVELE-KEIQILLLPKDPNDDKNVFVEIRGGAGGEEAALFAYNLFRM 134 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+AE++++ TE + +++ + G K +IKG AY LK E GVHR+ R+ +S+ Sbjct: 135 YTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVPDTESSG 194 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V P VDD +EIEI++ D RID +RASG GGQ VNTTDSAVRITH+P+G+V Sbjct: 195 RIHTSTVTVAVLPEVDD-VEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITHLPSGLV 253 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ E+SQ KNK +A +LR++L+E Q+R + I K+++G G +IR+Y Sbjct: 254 VSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSERIRTYNY 311 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P + D R + LDGD+ + + A + Sbjct: 312 -PQGRITDHRIGLTLYKLDSFLDGDVQEMINALIT 345 >gi|88607753|ref|YP_505069.1| peptide chain release factor 2, truncation [Anaplasma phagocytophilum HZ] gi|88598816|gb|ABD44286.1| peptide chain release factor 2, truncated [Anaplasma phagocytophilum HZ] Length = 226 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 105/212 (49%), Positives = 141/212 (66%), Gaps = 1/212 (0%) Query: 41 EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100 +AK L+ ER + ++ + ++ D L E+ + DD L + LQ +KL + Sbjct: 7 KAKSLLSERSRVSAVLTSFRVLEKEHKDLAELAEMISDSDDRDFLATINAELQSLKLRIS 66 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK-RKFKTEALEIHD 159 K+ E + S EAD+N +L + +GAGGTES DW MLLRMYT+WAE +F E ++ D Sbjct: 67 QKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETVDSVD 126 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 GEE G+K+ T+ I G AYGW + E G+HRLVRISP+D ++RHTSF+S+ V PVVD I Sbjct: 127 GEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVVDHEI 186 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 +I+I E D RIDTYRASGAGGQHVN T+SAVR Sbjct: 187 DIKILEKDLRIDTYRASGAGGQHVNKTESAVR 218 >gi|225849764|ref|YP_002729998.1| peptide chain release factor 1 [Persephonella marina EX-H1] gi|254790894|sp|C0QTI3|RF1_PERMH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225646004|gb|ACO04190.1| peptide chain release factor 1 [Persephonella marina EX-H1] Length = 361 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 133/346 (38%), Positives = 192/346 (55%), Gaps = 10/346 (2%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L +N ++L L DP + ++ + + + +E + + KE + L D Sbjct: 7 LQKLENIDEKLKKLEAALSDPEVLKDQKKLQQVAKEHKETEKLSKLYKEYKKVLKDIEET 66 Query: 73 LELALEEDDCSIL--QETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTE 129 L D+ L +E NL + K E+E + Q E L D + LE+ GAGG E Sbjct: 67 KSLLNNPDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPNDEKNVILEIRQGAGGEE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+AE++ +K E L +H + GIK LIKG AY LK E GVHR Sbjct: 127 AALFAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALIKGQGAYSRLKFESGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S+ R HTS +++ V P ++ ++IEI + +I+T RASGAGGQHVNTTDSA Sbjct: 187 VQRVPETESSGRIHTSTATVAVLPEAEE-VDIEIKPEELKIETMRASGAGGQHVNTTDSA 245 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+VV CQ ERSQ +N+A+A +LRA+L + R E I + + ++G G Sbjct: 246 VRITHIPTGIVVSCQDERSQLQNRAKAMQILRARLK--DYYDRLEREKIEKERRMQVGTG 303 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N D+LDGDLD+ + +A Sbjct: 304 DRSEKIRTYNF-PQNRVTDHRINYTSHRLHDILDGDLDEIIDQLIA 348 >gi|313672261|ref|YP_004050372.1| bacterial peptide chain release factor 1 (brf-1) [Calditerrivibrio nitroreducens DSM 19672] gi|312939017|gb|ADR18209.1| bacterial peptide chain release factor 1 (bRF-1) [Calditerrivibrio nitroreducens DSM 19672] Length = 356 Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 139/357 (38%), Positives = 204/357 (57%), Gaps = 30/357 (8%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS----------FIKE 61 +FD + +++ + L K DP++ ++ + L +E L + IKE Sbjct: 1 MFDHLEEVLEKYNELTEKLADPNVMSDIKVYQQLSKEHSDLKPIVEKYLEYKDVQRSIKE 60 Query: 62 IQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + L D + L+ELA E L E + L++I E+ + L D + Y+ Sbjct: 61 AEAILKDGGDKDLIELAEIE-----LAEGKEKLEKISEEL---KILLLPKDPFDEKNIYI 112 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ AG GG ES +A LLRMY R+AEK +KTE ++ ++ G K LL+KG NAY Sbjct: 113 EIRAGTGGEESALFAADLLRMYIRYAEKCGWKTEIIDANETGMGGYKEVILLVKGKNAYS 172 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E G HR+ RI +S+ R HTS ++ V P DD +++ I D RID YR+SGAG Sbjct: 173 KLKYEAGGHRVQRIPETESSGRIHTSACTVAVIPEADD-VDVHIDPKDLRIDVYRSSGAG 231 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANI 298 GQHVNTTDSAVRITHIPTG+VV CQ ERSQ KNK +A +L++K++E+EL++ R E A Sbjct: 232 GQHVNTTDSAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKSKIFEMELERQRTEQA-- 289 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K ++G G +IR+Y P + D R N+ + V++G+LD+ + A + Sbjct: 290 -ENRKQQVGSGDRSERIRTYNF-PQNRLTDHRINLTVYNLDMVMEGELDEIIDALIT 344 >gi|302671177|ref|YP_003831137.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus B316] gi|302395650|gb|ADL34555.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus B316] Length = 357 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 127/350 (36%), Positives = 203/350 (58%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ +++ + + DP + + + LM+E+++L+ + E + C I Sbjct: 1 MFDKIEDILRKFEDITMELNDPSVIADQERFRKLMKEQKNLEPLVECYNEYKK--CKETI 58 Query: 72 LLELAL--EEDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSND---AYLEVHAGA 125 LA+ EE D + + D LQ K ++ E + +L D ND +E+ AG Sbjct: 59 DESLAMLDEESDPEMKEMLKDELQTAKDKIPELEDKLKILLLPKDPNDDKNVIVEIRAGV 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A + R+YTR+AE++ ++ E + + D GIK+ + +IKG AY LK E Sbjct: 119 GGDEAALFAADMYRVYTRYAERQNWRVETMSVEDIGIGGIKTVSFMIKGNGAYSRLKFES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ RI +S R HTS ++ + P V+D +E+EI +DC+ D +RASG GGQ VNT Sbjct: 179 GVHRVQRIPATESGGRIHTSAITVAIMPEVED-VEVEIDMNDCKFDVFRASGNGGQCVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+TH PTG+V+ CQ E+SQ +NKA+A +LRAKLYELE +K+ N E +++ Sbjct: 238 TDSAVRLTHFPTGIVISCQDEKSQQQNKAKALRVLRAKLYELEQEKKHN--NEAELRRSQ 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G G +IR+Y + V D R + ++DGD+D+ + + +A Sbjct: 296 VGSGDRSEKIRTYNFHQGR-VTDHRIGLTLYKIDQIMDGDIDEIIDSLIA 344 >gi|294341235|emb|CAZ89636.1| Peptide chain release factor 1 (RF-1) [Thiomonas sp. 3As] Length = 358 Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 109/240 (45%), Positives = 155/240 (64%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + ++E+ AG GG ES +A LLRMY R+AE++++ TE + + G K L + Sbjct: 107 DSRNVFVEIRAGTGGEESALFAADLLRMYARYAERKRWTTEVISESPSDLGGYKEVILRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ ++ R HTS +++ V P VD++ I+I+ SD RIDT Sbjct: 167 AGEGAYGLLKYESGGHRVQRVPKTETQGRIHTSAATVAVMPEVDEAQAIQINPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSA+RITH+PTG+VV+CQ ERSQH+NKA+A ++L A+L E E Q R Sbjct: 227 FRASGAGGQHINKTDSAIRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQAR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + K+ +G G +IR+Y P V + R N+ +LDGDLD+ + A Sbjct: 287 Q--AEEAATRKSLVGSGDRSDRIRTYNF-PQGRVSEHRINLTLYKIDAILDGDLDELLTA 343 >gi|251778025|ref|ZP_04820945.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082340|gb|EES48230.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 360 Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 127/335 (37%), Positives = 197/335 (58%), Gaps = 13/335 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD---C 82 L+ K DP + QN E + L +E+ L+ ++ KE + + D + E+ +E D Sbjct: 16 LSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSDESDREMK 75 Query: 83 SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 +L E +L ++E+E K+ + LL D + ++E+ GAGG E+ +A L RM Sbjct: 76 EMLNEEISSLSEREIELE-KEIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFAYNLFRM 134 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+AE++++ TE + +++ + G K +IKG AY LK E GVHR+ R+ +S+ Sbjct: 135 YTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVPDTESSG 194 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V P VDD +EIEI++ D RID +RASG GGQ VNTTDSAVRITH+P+G+V Sbjct: 195 RIHTSTVTVAVLPEVDD-VEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITHLPSGLV 253 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ E+SQ KNK +A +LR++L+E Q+R + I K+++G G +IR+Y Sbjct: 254 VSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSERIRTYNY 311 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P + D R + LDG++ + + A + Sbjct: 312 -PQGRITDHRIGLTLYKLDSFLDGEVQEMINALIT 345 >gi|298245470|ref|ZP_06969276.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963] gi|297552951|gb|EFH86816.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963] Length = 358 Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 103/244 (42%), Positives = 160/244 (65%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A + + GAGG E+ +A L RMY+R+A+ R++K E L+ +D E+ G K T +I Sbjct: 107 DEKNAVVTIQGGAGGDEAALFAADLFRMYSRYADGRRWKIEILDGNDTEQGGFKDITFVI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY +K E G HR+ R+ ++N R HTS + + V P DD I+IE+ ++D R+D Sbjct: 167 RGKGAYSRMKYEGGTHRVQRVPSTEANGRIHTSTAKVIVLPEADDDIQIEVKDADIRVDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR++G GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNK +A N+L+++L++LE KR Sbjct: 227 YRSTGHGGQSVNTTDSAVRITHLPTGLVVTCQDEKSQLKNKQKALNVLKSRLWDLEEAKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E +G++ ++++ G +IR+Y P V D R + + + +LDG LD+F+ Sbjct: 287 QE--ELGKARRSQVQTGDRSEKIRTYNF-PQDRVTDHRIGLTRHNLPGILDGSLDEFIDN 343 Query: 350 TLAI 353 + + Sbjct: 344 LITV 347 >gi|91205113|ref|YP_537468.1| peptide chain release factor 1 [Rickettsia bellii RML369-C] gi|119361596|sp|Q1RJT5|RF1_RICBR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91068657|gb|ABE04379.1| Peptide chain release factor RF-1 [Rickettsia bellii RML369-C] Length = 357 Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 115/246 (46%), Positives = 160/246 (65%), Gaps = 9/246 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EADS A +E+ AG GG E+ +A L MY R+AE + ++ E L I + G K + Sbjct: 107 EADSKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSA 166 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG + + LK E GVHR+ R+ +S R HTS +++ V P V+D ++I++ E D RI Sbjct: 167 SIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEVED-VDIKLEEKDLRI 225 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYRASGAGGQHVNTTDSAVRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E + Sbjct: 226 DTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR 285 Query: 291 KR-EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 K+ +E AN + + +IG G +IR+Y P V D R N+ +V++G LD+F Sbjct: 286 KKDQERAN---NRRKQIGSGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVINGQLDEF 341 Query: 347 MKATLA 352 ++A +A Sbjct: 342 IEALIA 347 >gi|157827554|ref|YP_001496618.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389] gi|166223596|sp|A8GXI1|RF1_RICB8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157802858|gb|ABV79581.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389] Length = 357 Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 116/250 (46%), Positives = 161/250 (64%), Gaps = 9/250 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L EADS A +E+ AG GG E+ +A L MY R+AE + ++ E L I + G K Sbjct: 103 LPKDEADSKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYK 162 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 + IKG + + LK E GVHR+ R+ +S R HTS +++ V P V+D ++I++ E Sbjct: 163 EVSASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEVED-VDIKLEEK 221 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE Sbjct: 222 DLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYE 281 Query: 287 LELQKR-EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 E +K+ +E AN + + +IG G +IR+Y P V D R N+ +V++G Sbjct: 282 EERRKKDQERAN---NRREQIGSGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVINGQ 337 Query: 343 LDDFMKATLA 352 LD+F++A +A Sbjct: 338 LDEFIEALIA 347 >gi|188590258|ref|YP_001919883.1| peptide chain release factor 1 [Clostridium botulinum E3 str. Alaska E43] gi|238689644|sp|B2UZI5|RF1_CLOBA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|188500539|gb|ACD53675.1| peptide chain release factor 1 [Clostridium botulinum E3 str. Alaska E43] Length = 360 Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 127/335 (37%), Positives = 197/335 (58%), Gaps = 13/335 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD---C 82 L+ K DP + QN E + L +E+ L+ ++ KE + + D + E+ +E D Sbjct: 16 LSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSDESDREMK 75 Query: 83 SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 +L E +L ++E+E K+ + LL D + ++E+ GAGG E+ +A L RM Sbjct: 76 EMLNEEISSLAEREIELE-KEIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFAYNLFRM 134 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+AE++++ TE + +++ + G K +IKG AY LK E GVHR+ R+ +S+ Sbjct: 135 YTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVPDTESSG 194 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V P VDD +EIEI++ D RID +RASG GGQ VNTTDSAVRITH+P+G+V Sbjct: 195 RIHTSTVTVAVLPEVDD-VEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITHLPSGLV 253 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ E+SQ KNK +A +LR++L+E Q+R + I K+++G G +IR+Y Sbjct: 254 VSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSERIRTYNY 311 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P + D R + LDG++ + + A + Sbjct: 312 -PQGRITDHRIGLTLYKLDSFLDGEVQEMINALIT 345 >gi|332295519|ref|YP_004437442.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM 14796] gi|332178622|gb|AEE14311.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM 14796] Length = 361 Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 127/309 (41%), Positives = 183/309 (59%), Gaps = 19/309 (6%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107 E L N +S +KE+++ + + AL E++ ++++ +NL E K + Sbjct: 55 ELNKLKNYLSDLKELKNSEDEEI----KALAEEEFQVVEKNIENL-------ESKLLNFI 103 Query: 108 LSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L + D + LE+ AGAGG E+ +A+ LLRMY R+AE++ KTE L I++ GIK Sbjct: 104 LPKDPLDEKNIILEIRAGAGGEEAALFASELLRMYLRYAERKNAKTEILSINETGIGGIK 163 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A + IKG Y LK E G HR+ R+ +S R HTS +++ V P D+ I+I I E Sbjct: 164 EAIISIKGKRIYSRLKFESGTHRVQRVPETESGGRIHTSTATVAVLPEADE-IDITIDEK 222 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +IDT+RA GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ +NK +A +L AK+ Sbjct: 223 DLKIDTFRAGGAGGQHVNKTDSAVRITHLPTGIVVACQDERSQFQNKEKAMRILAAKI-- 280 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 LE ++ I S + ++G G +IR+Y P V D R N+ ++VLDGDL Sbjct: 281 LEEKRVASEKEIAMSRRIQVGSGDRSEKIRTYNF-PQGRVTDHRINLTLYRLNEVLDGDL 339 Query: 344 DDFMKATLA 352 D+ + A +A Sbjct: 340 DEIIDALIA 348 >gi|254504878|ref|ZP_05117029.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11] gi|222440949|gb|EEE47628.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11] Length = 357 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 119/270 (44%), Positives = 170/270 (62%), Gaps = 13/270 (4%) Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E S+N++R+ +V + L EAD+NDA LEV AG GG E+ +A L RMY R+AE Sbjct: 83 ELSENVERLTQDV---RIGLLPKDEADTNDAILEVRAGTGGDEAALFAGDLFRMYQRYAE 139 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 R +K E L +GE G K + G N + LK E GVHR+ R+ +S R HTS Sbjct: 140 LRGWKVEILSASEGEVGGFKEVIASVSGENVFARLKFESGVHRVQRVPATESGGRIHTSA 199 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +++ V P ++ ++I++ +SD RIDT+RASGAGGQHVNTTDSAVRITHIPTG+VV Q E Sbjct: 200 ATVAVLPQAEN-VDIDVQDSDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGIVVAVQDE 258 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQM 322 RSQHKNKA+A +LRA++Y+ ++RE A+ E+ + ++G G +IR+Y P Sbjct: 259 RSQHKNKARAMQLLRARIYD---EERERAASERTEARRLQVGSGDRSERIRTYNF-PQGR 314 Query: 323 VKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 V D R + ++ G+ LD+ ++A + Sbjct: 315 VTDHRIGLTLYKLDQIIAGESLDEVIEALI 344 >gi|23010857|ref|ZP_00051405.1| COG1186: Protein chain release factor B [Magnetospirillum magnetotacticum MS-1] Length = 136 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 94/111 (84%), Positives = 104/111 (93%) Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI ESDCRIDTYR+SGAGGQHVNTT Sbjct: 1 MHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKESDCRIDTYRSSGAGGQHVNTT 60 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 DSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE A Sbjct: 61 DSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKAT 111 >gi|304415271|ref|ZP_07395967.1| peptide chain release factor 1 [Candidatus Regiella insecticola LSR1] gi|304282877|gb|EFL91344.1| peptide chain release factor 1 [Candidatus Regiella insecticola LSR1] Length = 360 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 121/288 (42%), Positives = 175/288 (60%), Gaps = 16/288 (5%) Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAY 118 E ++ D+L + ELA +E L+E +I+ E ++ + LL D D + Sbjct: 63 ETAKKMLDDLEMRELAQDE-----LKEA-----KIRSEALEQKLQVLLLPQDPDDERDCF 112 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 LE+ AG GG E+ +A + RMY+R+AE R++K E + I++GE+ G K I G Y Sbjct: 113 LEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKMEVININEGEKGGYKEVITKITGNGVY 172 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G LK E G HR+ R+ +S R HTS ++ V PV+ ++ +EIS++D RIDT+R+SGA Sbjct: 173 GQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPVLPETEVLEISDNDLRIDTFRSSGA 232 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E E QKR++ Sbjct: 233 GGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAKSVLAARIREAERQKRQQTQ-- 290 Query: 299 GESSKTEIGWG-RQIRSYVLQ-PYQMVKDLRTNIEKTSPSDVLDGDLD 344 + +G G R RS P V D R N+ +V++G LD Sbjct: 291 ASERRNLLGSGDRSDRSRTYNFPQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|325278151|ref|ZP_08143660.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51] gi|324096726|gb|EGB95063.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51] Length = 157 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 99/154 (64%), Positives = 121/154 (78%), Gaps = 1/154 (0%) Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH+PT Sbjct: 1 SGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHVPT 60 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 VV CQ ERSQH NK A MLRAKLYELE+QKR + E SK++IGWG QIRSYVL Sbjct: 61 NTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVL 120 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +KDLRT +E++ VLDGDLD +++A+L Sbjct: 121 DDSR-IKDLRTGVERSDCQKVLDGDLDQYLEASL 153 >gi|30692917|ref|NP_198466.2| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|332006669|gb|AED94052.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana] Length = 391 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 105/246 (42%), Positives = 158/246 (64%), Gaps = 3/246 (1%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q ++ L +K D W + +A+ + L + + + E + + D +++L E D Sbjct: 109 QEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKLTEEMD 168 Query: 81 --DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D S+L+E ++ + ++ + LLSG D A + + AGAGGT++QDWA+MLL Sbjct: 169 STDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADMLL 228 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G AYG++ GE+G HR+VR SP++S Sbjct: 229 RMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPFNS 288 Query: 199 NSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 R TSFS + V P++ ++++ IEI E D I RA G GGQ+VN ++AVRITHIPT Sbjct: 289 KGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPT 348 Query: 258 GVVVQC 263 GV V+C Sbjct: 349 GVAVRC 354 >gi|296137058|ref|YP_003644300.1| peptide chain release factor 1 [Thiomonas intermedia K12] gi|295797180|gb|ADG31970.1| peptide chain release factor 1 [Thiomonas intermedia K12] Length = 358 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 108/240 (45%), Positives = 155/240 (64%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + ++E+ AG GG ES +A LLRMY R+AE++++ TE + + G K L + Sbjct: 107 DSRNVFVEIRAGTGGEESALFAADLLRMYARYAERKRWATEVISESPSDLGGYKEVILRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ ++ R HTS +++ V P +D++ I+I+ SD RIDT Sbjct: 167 AGEGAYGLLKYESGGHRVQRVPKTETQGRIHTSAATVAVMPEMDEAQAIQINPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSA+RITH+PTG+VV+CQ ERSQH+NKA+A ++L A+L E E Q R Sbjct: 227 FRASGAGGQHINKTDSAIRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQSR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + K+ +G G +IR+Y P V + R N+ +LDGDLD+ + A Sbjct: 287 Q--AEEAATRKSLVGSGDRSDRIRTYNF-PQGRVSEHRINLTLYKIDAILDGDLDELLTA 343 >gi|170289255|ref|YP_001739493.1| peptide chain release factor 1 [Thermotoga sp. RQ2] gi|281412857|ref|YP_003346936.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10] gi|170176758|gb|ACB09810.1| peptide chain release factor 1 [Thermotoga sp. RQ2] gi|281373960|gb|ADA67522.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10] Length = 342 Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 107/237 (45%), Positives = 154/237 (64%), Gaps = 7/237 (2%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + A +E+ GAGG E+ +A L RMYTR+AE++ + E EIH+ + GI+ +K Sbjct: 85 GDKAIVEIRPGAGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHETDLGGIREVVFFVK 144 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G NAYG LK E GVHR+ RI +S R HTS +++ V P +++ +IEI D +I+T+ Sbjct: 145 GKNAYGILKYESGVHRVQRIPVTESGGRIHTSTATVAVLPEIEEK-DIEIRPEDLKIETF 203 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASG GGQ+VN T+SAVRITHIPTG+VV CQ ERSQ++N+ A +LRA+LY+L+ +++E Sbjct: 204 RASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQNRQTALRILRARLYQLQKEQKE 263 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 I + K++IG G +IR+Y P V D R N ++LDGDLD+ + Sbjct: 264 R--EISQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQEILDGDLDEII 317 >gi|18311184|ref|NP_563118.1| peptide chain release factor 1 [Clostridium perfringens str. 13] gi|110799590|ref|YP_696880.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124] gi|110802815|ref|YP_699476.1| peptide chain release factor 1 [Clostridium perfringens SM101] gi|168205561|ref|ZP_02631566.1| peptide chain release factor 1 [Clostridium perfringens E str. JGS1987] gi|168210131|ref|ZP_02635756.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC 3626] gi|168213694|ref|ZP_02639319.1| peptide chain release factor 1 [Clostridium perfringens CPE str. F4969] gi|168215831|ref|ZP_02641456.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239] gi|169344167|ref|ZP_02865149.1| peptide chain release factor 1 [Clostridium perfringens C str. JGS1495] gi|182624062|ref|ZP_02951850.1| peptide chain release factor 1 [Clostridium perfringens D str. JGS1721] gi|20139327|sp|Q8XIB9|RF1_CLOPE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361525|sp|Q0TNB0|RF1_CLOP1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361526|sp|Q0SQY1|RF1_CLOPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|18145867|dbj|BAB81908.1| peptide chain release factor 1 [Clostridium perfringens str. 13] gi|110674237|gb|ABG83224.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124] gi|110683316|gb|ABG86686.1| peptide chain release factor 1 [Clostridium perfringens SM101] gi|169297625|gb|EDS79725.1| peptide chain release factor 1 [Clostridium perfringens C str. JGS1495] gi|170662868|gb|EDT15551.1| peptide chain release factor 1 [Clostridium perfringens E str. JGS1987] gi|170711762|gb|EDT23944.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC 3626] gi|170714864|gb|EDT27046.1| peptide chain release factor 1 [Clostridium perfringens CPE str. F4969] gi|177910955|gb|EDT73309.1| peptide chain release factor 1 [Clostridium perfringens D str. JGS1721] gi|182382220|gb|EDT79699.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239] Length = 360 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 131/346 (37%), Positives = 194/346 (56%), Gaps = 18/346 (5%) Query: 20 VQRLSF-------LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + RL+F L+ K DP + N E + L +E L+ ++ KE ++ + Sbjct: 3 LDRLNFIENKYDELSVKISDPSIMANQKEWRKLCKEHADLEVIVNKYKEYKEATEELEAN 62 Query: 73 LELALEEDDCS----ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 E+ EE D I E D +R K + Q L D + ++E+ GAGG Sbjct: 63 KEMLSEESDQEMREMINSEIKDLTERKKELEDEIQILLLPKDPNDDKNVFVEIRGGAGGD 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYT++AEK ++K E + ++ + G K +IKG AY LK E G H Sbjct: 123 EAALFAANLFRMYTKYAEKNRWKVELMSANETDIGGFKEVVFMIKGAGAYSKLKYESGAH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ V P VDD +EIEI++ D +ID +RASG GGQ VNTTDS Sbjct: 183 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VEIEINDKDIKIDVFRASGNGGQCVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+P+G+VV CQ E+SQ KNK +A +LRA+L+ E + E +A I E K+++G Sbjct: 242 AVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRARLF--EQAEAERLAGIAEDRKSQVGT 299 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R N+ L+GD+D+ + A + Sbjct: 300 GDRSERIRTYNY-PQGRVTDHRINMTLYKLDSFLEGDIDEILNALI 344 >gi|225848358|ref|YP_002728521.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644346|gb|ACN99396.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense Az-Fu1] Length = 360 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 111/243 (45%), Positives = 151/243 (62%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ G GG E+ +A L RMY R+AE+ +KTE L IH + G+K LI Sbjct: 110 DEKNVILEIRQGTGGEEAALFAAELFRMYQRYAERHGWKTEVLSIHPTDRGGVKEVIALI 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E GVHR+ R+ +S+ R HTS +++ V P ++ ++IEI D +I+T Sbjct: 170 KGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTATVAVLPEAEE-VDIEIKPEDLKIET 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RA GAGGQHVNTTDSAVRITH+PTG+VVQCQ ERSQ +NK +A +LRA+L + R Sbjct: 229 MRAGGAGGQHVNTTDSAVRITHLPTGIVVQCQDERSQLQNKLKAMQILRARLK--DYYDR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E I + K ++G G +IR+Y P V D R N +D+LDGDLD+ ++ Sbjct: 287 LEREKIAKERKEQVGTGERSEKIRTYNF-PQNRVTDHRVNYTSYRINDILDGDLDEIIEV 345 Query: 350 TLA 352 +A Sbjct: 346 LIA 348 >gi|148270549|ref|YP_001245009.1| peptide chain release factor 1 [Thermotoga petrophila RKU-1] gi|147736093|gb|ABQ47433.1| bacterial peptide chain release factor 1 (bRF-1) [Thermotoga petrophila RKU-1] Length = 342 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 106/237 (44%), Positives = 154/237 (64%), Gaps = 7/237 (2%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + A +E+ GAGG E+ +A L RMYTR+AE++ + E EIH+ + GI+ +K Sbjct: 85 GDKAIVEIRPGAGGEEAALFARDLFRMYTRYAERKGWNLEVAEIHETDLGGIREVVFFVK 144 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G NAYG LK E GVHR+ R+ +S R HTS +++ V P +++ +IEI D +I+T+ Sbjct: 145 GKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIEEK-DIEIRPEDLKIETF 203 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERSQ++NK A +LRA+LY+L+ +++E Sbjct: 204 RASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRILRARLYQLQKEQKE 263 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 I + K++IG G +IR+Y P V D R N ++LDGDLD+ + Sbjct: 264 R--EISQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQEILDGDLDEII 317 >gi|302036343|ref|YP_003796665.1| peptide chain release factor RF-1 [Candidatus Nitrospira defluvii] gi|300604407|emb|CBK40739.1| Peptide chain release factor RF-1 [Candidatus Nitrospira defluvii] Length = 386 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 136/348 (39%), Positives = 197/348 (56%), Gaps = 18/348 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN-AISFIK--EIQDRLCDNLIL 72 W+ R L + DP + L +ER L+ A+ FI E + +L D L Sbjct: 35 WEGMAARFQELTNQLMDPSVLNQPGMIHKLNKERTELEEPALQFIAYCEAKKQLEDVSAL 94 Query: 73 LELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 L+ A D + E SD+LQ+ LE+E++ + L + D + +LE+ AG GG E+ Sbjct: 95 LQDASTGADMKQLFAEESDHLQQQVLEIEHRAKDFLTPKDPRDEKNMFLEIRAGTGGDEA 154 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI---KSATLLIKGPNAYGWLKGEQGV 187 +A L RMY ++AE+ + K LE+ D E GI + L++G AYG L+ E GV Sbjct: 155 ALFAGDLFRMYLKYAERNRLK---LEVVDASETGIGGYREVIALLEGKGAYGRLRYESGV 211 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS ++ V P VD+ +E+ I D RIDT+ +SGAGGQ VNTT Sbjct: 212 HRVQRVPTTEASGRIHTSTVTVAVMPEVDE-VEVHIDPKDLRIDTFCSSGAGGQSVNTTY 270 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTGVVV CQ ERSQ KN+ +A LRA++ E E +K+E A I ++ K+++G Sbjct: 271 SAVRITHIPTGVVVSCQDERSQLKNRTKAMRNLRARIVEAEREKQE--AEIAQNRKSQVG 328 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R + VL GDL++ ++A A Sbjct: 329 TGDRSEKIRTYNF-PQNRVTDHRIGLTVHKLDQVLAGDLEEIVQALRA 375 >gi|256545370|ref|ZP_05472733.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170] gi|256398931|gb|EEU12545.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170] Length = 357 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 126/335 (37%), Positives = 198/335 (59%), Gaps = 13/335 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILLELALEEDDC 82 L K DP + + K + RE L + + I+ +D + +N LL+ A +++ Sbjct: 15 LEKKLADPEVLSDTERFKKVSREYNQLKPIVEKYNQIRSAEDMINENTELLKEADDKEMI 74 Query: 83 SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 +L+ D ++ LE + + LL + D D +E+ AGAGG E+ +A L RM Sbjct: 75 DLLKSEIDENKK-NLEKYNEDLKVLLIPTDPNDHKDVIVEIRAGAGGEEAGLFAGNLYRM 133 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y +A+K+K+KTE +++ G+K AT +++G AY LK E GVHR+ R+ +S Sbjct: 134 YHMYADKQKYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGVHRVQRVPETESGG 193 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P D+ ++I+I +D R D YR+SG GGQ VNTTDSAVR+THIPTG+V Sbjct: 194 RIHTSTATVAVLPEADE-VDIKIDPNDIRTDVYRSSGNGGQSVNTTDSAVRLTHIPTGLV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ E+SQ KNK +A +LRA+LYE+E QKR++ I ++ K+++G G +IR+Y Sbjct: 253 VTCQDEKSQIKNKDKAMRVLRARLYEIEEQKRQK--EISDNRKSQVGTGDRSERIRTYNY 310 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P + D R N D LDG++++ +++ + Sbjct: 311 -PQGRITDHRINKTIYQLDDFLDGNIEEMIESLIT 344 >gi|224531646|ref|ZP_03672278.1| peptide chain release factor 1 [Borrelia valaisiana VS116] gi|224511111|gb|EEF81517.1| peptide chain release factor 1 [Borrelia valaisiana VS116] Length = 357 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 130/341 (38%), Positives = 200/341 (58%), Gaps = 15/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRLCDNLI 71 ++A ++ L K +D +L +N E +++E HL+ I + K I ++ DN Sbjct: 6 LNSATSKIKSLEEKLQDINLIKNQKEYSKIIKEYTHLEKINTKKIEYEK-ILSQINDNKT 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129 +LE +++ ++++ +L + K ++E+ Q + LL E DS + +E+ AG GG E Sbjct: 65 ILEKEEQQEMKELIKQELIDLDKKKEDIEH-QIKILLLPQDENDSKNIIIEIRAGTGGEE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI +SN R TS +++ V P ++++ + D RID YR+SGAGGQHVNTTDSA Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEETEIEINEK-DLRIDVYRSSGAGGQHVNTTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 243 VRITHLPTRIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P + D R NI + + G+LD + Sbjct: 301 DRSERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLL 340 >gi|289450407|ref|YP_003475653.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184954|gb|ADC91379.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 366 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 130/337 (38%), Positives = 193/337 (57%), Gaps = 13/337 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 + + R L+ DP L + +++E+ L + I++ +D L +NL + Sbjct: 6 LEAVLNRYEELSAGLSDPSLLADRDRYLRVVKEQAGLTEIVGVIRDYIAKKDELAENLAM 65 Query: 73 LELALEEDDCSILQETSDNLQRIKL-EVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130 L+ +E+ +L+E +L ++KL E+E K Q L D + YLE+ GAGG E+ Sbjct: 66 LQETDDEEMRLLLKEEIRDL-KVKLPELEEKLQILLLPKDPRDEKNVYLEIRGGAGGEEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A +L RMY +AE + FK E +E + E G+K I+G AY K E GVHR+ Sbjct: 125 ALFAEVLFRMYQSYAESKHFKVEIVEWNATELGGLKEVVCSIQGSGAYSLFKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P VD+ +++EI D IDTYR+SGAGGQHVN TDSA+ Sbjct: 185 QRVPVTESGGRIHTSTVTVAVLPEVDE-VDVEILPGDITIDTYRSSGAGGQHVNKTDSAI 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV CQ +RSQ+KNK +A +LRAKLYE ++R +I E+ + ++G G Sbjct: 244 RITHIPTGIVVTCQDQRSQYKNKDRAMAVLRAKLYERAQEER--AGSIAEARRDQVGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +IR+Y P V D R + ++L G+LD Sbjct: 302 RSERIRTYNY-PQGRVTDHRIGLTVYKIDEILAGNLD 337 >gi|260772290|ref|ZP_05881206.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14] gi|260611429|gb|EEX36632.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14] Length = 362 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 125/338 (36%), Positives = 192/338 (56%), Gaps = 11/338 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L ++ V+R + DP + + + + L +E L+ + Q + ++ + Sbjct: 6 LVKLESLVERYEEVQHLLGDPAVIGDQNKFRSLSKEYSQLEEVTKCFQAYQ-QAQEDFVA 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E +EDD + + D ++ K E+E E +L D ND +LE+ AGAGG Sbjct: 65 AEEMTKEDDAEMREMAQDEMKAAKAEIERLSAELQILLLPKDPNDDRNCFLEIRAGAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G H Sbjct: 125 EAGIFAGDLFRMYSRFAEKKGWRIEVMSASEAEHGGYKEMIAKVNGDGAYGVLKFESGGH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDS Sbjct: 185 RVQRVPATESQGRVHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR A I ++ + +G Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIVQAEEKKR--AAEISDTRRNLLGS 302 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 G +IR+Y P V D R N+ ++V++GDL Sbjct: 303 GDRSDRIRTYNY-PQSRVSDHRINLTIYRLNEVMEGDL 339 >gi|74318511|ref|YP_316251.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC 25259] gi|119361634|sp|Q3SG10|RF1_THIDA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|74058006|gb|AAZ98446.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC 25259] Length = 360 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 128/339 (37%), Positives = 193/339 (56%), Gaps = 9/339 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 A +RL L+ P + ++ + L RE L + ++ + D E+ + Sbjct: 12 ADERLEELDALLAQPEVAADMDSYRKLTREHAELSPVVGLYRQYKQVEADQKTAQEMLAD 71 Query: 79 EDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136 D + + E +D RI E+E + +LL + D + +LE+ AG GG ES +A Sbjct: 72 ADMRELAEAELADGAARIT-ELENELQTALLPRDPNDERNIFLEIRAGTGGDESALFAGN 130 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMYTR+AE++++K E + GE G K + I G AY LK E G HR+ R+ Sbjct: 131 LLRMYTRYAERQRWKVEIVSESPGEVGGYKEVIVRIVGEGAYSRLKFESGGHRVQRVPET 190 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS ++ V P + E++I+ +D RIDT+RASGAGGQH+N TDSAVRITH+P Sbjct: 191 ESQGRIHTSACTVAVMPEAAEVGEVDINPADLRIDTFRASGAGGQHINKTDSAVRITHLP 250 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV+CQ +RSQH+N+AQA ++L A+L + E+Q ++ A+ + K+ IG G +IR Sbjct: 251 TGLVVECQDDRSQHRNRAQAMSVLAARLKDREIQAQQ--ASEASTRKSLIGSGDRSDRIR 308 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +Y P + D R N+ V+DGDL + + A A Sbjct: 309 TYNF-PQGRITDHRINLTLYKIDAVMDGDLGELLDALAA 346 >gi|148546007|ref|YP_001266109.1| peptide chain release factor 1 [Pseudomonas putida F1] gi|166223590|sp|A5VYG5|RF1_PSEP1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148510065|gb|ABQ76925.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas putida F1] Length = 360 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 119/285 (41%), Positives = 171/285 (60%), Gaps = 18/285 (6%) Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEA---------DSNDA---YLEVHAGAGGTES 130 ++L+++ +L+ + LE + E LL+ EA D ND +LE+ AG GG E+ Sbjct: 67 ALLKDSDPDLREMALEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AEKR ++ E L ++GE G K ++G N YG LK E G HR+ Sbjct: 127 AIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P D+ IEI+ +D R+DTYRASGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++ + I K +G G Sbjct: 247 RITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA--IASERKLLVGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ S D+L G +D ++ LA Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348 >gi|260890431|ref|ZP_05901694.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254] gi|260860051|gb|EEX74551.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254] Length = 360 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 110/243 (45%), Positives = 156/243 (64%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A + RM+TR+AE+ ++KTE ++ + G+K T LI Sbjct: 106 DDKNVIMEIRAGAGGDEAALFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E GVHR+ R+ +S+ R HTS ++ V P +DD E+EI+ SD +IDT Sbjct: 166 KGNGAYSRLKFESGVHRVQRVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITH+PTG+VV Q RSQ KN+ A +L +KLYE+E +K+ Sbjct: 226 YRSSGAGGQHVNTTDSAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + ++++G G +IR+Y P V D R + VLDGDLD+ + A Sbjct: 286 R--SAVENERRSQVGSGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDA 342 Query: 350 TLA 352 +A Sbjct: 343 LIA 345 >gi|190570518|ref|YP_001974876.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019274|ref|ZP_03335081.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238054477|sp|B3CL87|RF1_WOLPP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|190356790|emb|CAQ54152.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995383|gb|EEB56024.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 363 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 160/250 (64%), Gaps = 8/250 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L E DS +A LE+ AG GG E+ +A ML RMY ++AE+R +K E + I + G K Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 162 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A+ LI G + LK E GVHR+ R+ +S+ R HTS +++ + P V++ ++ EI E Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEE-VDFEIEEK 221 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YR+SG GGQ VNTTDSAVR+TH+PTG+VV Q E+SQHKNKA+A +LRA+LYE Sbjct: 222 DLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYE 281 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGD 342 +E QK+E K++IG G +IR+Y P + D R N+ ++ +G+ Sbjct: 282 IERQKKE--MERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGE 338 Query: 343 LDDFMKATLA 352 LD+F++A ++ Sbjct: 339 LDEFIEALIS 348 >gi|189182919|ref|YP_001936704.1| peptide chain release factor 1 [Orientia tsutsugamushi str. Ikeda] gi|238692229|sp|B3CQD1|RF1_ORITI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189179690|dbj|BAG39470.1| peptide chain release factor RF-1 [Orientia tsutsugamushi str. Ikeda] Length = 359 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 122/257 (47%), Positives = 166/257 (64%), Gaps = 11/257 (4%) Query: 96 KLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 KLE E K SLL E+D + +A +EV AG GG E+ +A L +MY R+AE++K+K E Sbjct: 90 KLEEEVKI--SLLPKESDDHKNAIIEVRAGTGGDEAALFAASLFQMYNRYAERKKWKFEL 147 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L I D E G K A+ LI G + LK E GVHR+ RI +SN R HTS +++ V P Sbjct: 148 LSISDTEIGGYKEASALISGNGVFANLKFESGVHRVQRIPKTESNGRIHTSAATVVVLPE 207 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 ++ ++++I D +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVV Q E+SQHKNKA Sbjct: 208 AEE-VDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVSQQDEKSQHKNKA 266 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A +L A+LY+LE QK ++ + S K ++G G +IR+Y P V D R N+ Sbjct: 267 KAMKILYARLYDLEKQKSQQEQAM--SRKVQVGTGDRSERIRTYNY-PQGRVTDHRINLT 323 Query: 332 KTSPSDVL-DGDLDDFM 347 +++ +G LD+ + Sbjct: 324 LYKIEEIIQEGKLDEII 340 >gi|257126615|ref|YP_003164729.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b] gi|257050554|gb|ACV39738.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b] Length = 360 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 110/243 (45%), Positives = 156/243 (64%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A + RM+TR+AE+ ++KTE ++ + G+K T LI Sbjct: 106 DDKNVIMEIRAGAGGDEAALFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E GVHR+ R+ +S+ R HTS ++ V P +DD E+EI+ SD +IDT Sbjct: 166 KGHGAYSRLKFESGVHRVQRVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITH+PTG+VV Q RSQ KN+ A +L +KLYE+E +K+ Sbjct: 226 YRSSGAGGQHVNTTDSAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + ++++G G +IR+Y P V D R + VLDGDLD+ + A Sbjct: 286 R--SAVESERRSQVGSGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDA 342 Query: 350 TLA 352 +A Sbjct: 343 LIA 345 >gi|297181249|gb|ADI17443.1| protein chain release factor a [uncultured Rhodospirillales bacterium HF0070_31K06] Length = 357 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 113/245 (46%), Positives = 156/245 (63%), Gaps = 8/245 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG E+ +A+ L+RMY R+AE ++TE L++ + E G+K A L Sbjct: 106 ADEKSAILEIRAGTGGDEAALFASDLMRMYQRYAEMHGWRTEFLDLSETELGGVKEAALS 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ DS R HTS +++ V P ++ ++I+I SD R+D Sbjct: 166 IAGRGVFARLKFESGVHRVQRVPTTDSGGRIHTSAATVAVLPEAEE-VDIQIDTSDLRVD 224 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYRASGAGGQHVN TDSA+RITH+PTG+VVQCQ E+SQHKN+A+A +LRA+LY+ E Q Sbjct: 225 TYRASGAGGQHVNKTDSAIRITHLPTGIVVQCQDEKSQHKNRAKAMKVLRARLYDHERQT 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 + A KT++G G +IR+Y P V D R N+ +L GD LD+ + Sbjct: 285 LD--AERAADRKTQVGSGDRSERIRTYNF-PQGRVTDHRINLTLHKLDRILAGDELDEVV 341 Query: 348 KATLA 352 +A Sbjct: 342 DLLIA 346 >gi|237807596|ref|YP_002892036.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187] gi|259585258|sp|C4LBL5|RF1_TOLAT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|237499857|gb|ACQ92450.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187] Length = 362 Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 123/325 (37%), Positives = 185/325 (56%), Gaps = 13/325 (4%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI------- 84 +P++ + + + L RE L ++ ++ Q D L +E L DD + Sbjct: 25 EPNVVSDQDKFRALTREYSQLGEVVAGFQQYQQAEAD-LQAIEEMLSGDDAEMKAMAQEE 83 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 L E ++R++ E+ Q L D ++ +LE+ AGAGG E+ +A L RMY+++ Sbjct: 84 LAEAKQLIERVEAEL---QVLLLPKDPKDDSNCFLEIRAGAGGDEAAIFAGDLFRMYSKY 140 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 +E+R ++ E + DGE G K + ++G + YG +K E G HR+ R+ +S R HT Sbjct: 141 SERRGWRMEIMSTSDGEHGGYKEIIVRMEGDSVYGIMKFESGGHRVQRVPETESQGRVHT 200 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S ++ V P + + EI+ +D RIDT+RASGAGGQH+N TDSA+RITHIPTG VV+CQ Sbjct: 201 SACTVMVLPEIPEKEIPEINPADLRIDTFRASGAGGQHINKTDSAIRITHIPTGTVVECQ 260 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMV 323 ERSQHKNKA+A ++L A+L + E KR A+ S G +IR+Y P V Sbjct: 261 DERSQHKNKARAMSVLAARLAQQEEDKRRAEADSTRRSILSTGDRSDRIRTYNY-PQGRV 319 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMK 348 D R N+ S+V++GDLD +K Sbjct: 320 SDHRINLTLYRLSEVMEGDLDSLLK 344 >gi|157828568|ref|YP_001494810.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933282|ref|YP_001650071.1| peptide chain release factor 1 [Rickettsia rickettsii str. Iowa] gi|166223598|sp|A8GSC7|RF1_RICRS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039987|sp|B0BXT9|RF1_RICRO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157801049|gb|ABV76302.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908369|gb|ABY72665.1| bacterial peptide chain release factor 1 (RF-1) [Rickettsia rickettsii str. Iowa] Length = 355 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 131/333 (39%), Positives = 195/333 (58%), Gaps = 22/333 (6%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 F+ E L V + K + + L+ A +F E+ DN L + ED+ Sbjct: 30 FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIYT 83 Query: 85 LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L+ + L+R +K+ + L +ADS A +EV AG+GG E+ +A +L MY R Sbjct: 84 LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE + ++ E L I D G K A+ IKG + + LK E GVHR+ R+ +S R H Sbjct: 137 YAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ V P ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V Sbjct: 197 TSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q E+SQHKNKA+A +LRA++YE E +K+E+ +S + ++G G +IR+Y P Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKEQAR--ADSRRGQVGSGDRSERIRTYNF-PQ 312 Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 V D R ++ +V+ +G LD+F++A +A Sbjct: 313 GRVSDHRIHLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|148284270|ref|YP_001248360.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong] gi|166223581|sp|A5CCS8|RF1_ORITB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146739709|emb|CAM79522.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong] Length = 359 Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 122/257 (47%), Positives = 166/257 (64%), Gaps = 11/257 (4%) Query: 96 KLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 KLE E K SLL E+D + +A +EV AG GG E+ +A L +MY ++AE++K+K E Sbjct: 90 KLEEEVKI--SLLPKESDDHKNAIIEVRAGTGGDEAALFAASLFQMYNKYAERKKWKFEL 147 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L I D E G K A+ LI G + LK E GVHR+ RI +SN R HTS +++ V P Sbjct: 148 LSISDTEIGGCKEASALISGNGVFANLKFESGVHRVQRIPKTESNGRIHTSAATVVVLPE 207 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 ++ ++++I D +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVV Q E+SQHKNKA Sbjct: 208 AEE-VDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVSQQDEKSQHKNKA 266 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A +L A+LY+LE QK ++ I S K ++G G +IR+Y P V D R N+ Sbjct: 267 KAMKILYARLYDLEKQKSKQEQAI--SRKVQVGTGDRSERIRTYNY-PQGRVTDHRINLT 323 Query: 332 KTSPSDVL-DGDLDDFM 347 +++ +G LD+ + Sbjct: 324 LYKIEEIIQEGKLDEII 340 >gi|270289542|ref|ZP_06195844.1| peptide chain release factor 2 [Chlamydia muridarum Weiss] Length = 182 Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 98/164 (59%), Positives = 120/164 (73%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+RWA +K E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN Sbjct: 1 MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 ++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+ Sbjct: 61 AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E N K Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEK 164 >gi|146296536|ref|YP_001180307.1| peptide chain release factor 1 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166223538|sp|A4XJN1|RF1_CALS8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145410112|gb|ABP67116.1| bacterial peptide chain release factor 1 (bRF-1) [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 355 Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 129/337 (38%), Positives = 191/337 (56%), Gaps = 17/337 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81 L K DP + N E + LM+E +L + +E + R+ + LL+ L+ED Sbjct: 15 LEKKISDPEIINNNQEWQKLMKEHSNLQPIVEKFREYK-RIIKTIEEAEELLDTNLDEDF 73 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140 +++E + + K VE + LL + D + +E+ AGAGG E+ +A L RM Sbjct: 74 EKLVKEELNQAKEQKEIVERELKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRM 133 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y+R+AE++ +K E + + + G K +I G AY LK E GVHR+ R+ +S Sbjct: 134 YSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGG 193 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P V+D +E+EI E D I+T+RA GAGGQHVN T+SAVRITH PTG+V Sbjct: 194 RIHTSTATVAVLPEVED-VEVEIREEDLEIETFRAGGAGGQHVNKTESAVRITHKPTGIV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSY 315 V CQ ERSQH N+ +A +LRA+LY+ LQ++E I ++++G G +IR+Y Sbjct: 253 VSCQDERSQHANRDRAMKILRARLYDYYQSLQQKE----IESQRRSQVGTGDRSERIRTY 308 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + VLDGDLD+ + A + Sbjct: 309 NF-PQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALIT 344 >gi|46446286|ref|YP_007651.1| peptide chain release factor 1 [Candidatus Protochlamydia amoebophila UWE25] gi|61214629|sp|Q6MDH3|RF1_PARUW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46399927|emb|CAF23376.1| probable translation releasing factor RF-1 [Candidatus Protochlamydia amoebophila UWE25] Length = 359 Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 121/343 (35%), Positives = 204/343 (59%), Gaps = 16/343 (4%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLILLELA 76 ++RL+ + +PH++ + + + L +E +L+N K+++ +L DN LL++ Sbjct: 10 LERLAEVEEVLGNPHVYDDQKKYRALTQEHAYLNNLKKSWDEKKDLEKQLEDNQELLKI- 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQF--ESLL--SGEADSNDAYLEVHAGAGGTESQD 132 E D + D++++++ V+ Q E+LL D+ + +E+ AG GG E+ Sbjct: 69 --EKDLEFAEVLKDDIRQLQSRVQELQLLIENLLVPPDPLDNRPSIIELRAGTGGDEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + +RMY +A+++ ++ E L E G K +++ G N Y +++ E G HR+ R Sbjct: 127 FVGDCVRMYKLFADRKGWRYELLSCTPSEMGGFKEYVMVLSGENVYRFMQYEAGTHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +I V P D++ EI++ E D RIDTYR+SGAGGQHVNTTDSAVRI Sbjct: 187 VPATEAQGRVHTSAITIAVLPEPDENEEIDLDEKDLRIDTYRSSGAGGQHVNTTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV CQ+ERSQHKNK +A +L+AK+ E+E QK+++ + + ++G G Sbjct: 247 THVPSGIVVYCQEERSQHKNKDKAMRLLKAKMAEIEQQKKQQ--ELASTRAQQVGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ K + V++GDL++ A +A Sbjct: 305 ERIRTYNF-PQNRITDHRINLTKYNLDYVINGDLEEITSALVA 346 >gi|15604386|ref|NP_220902.1| peptide chain release factor 1 [Rickettsia prowazekii str. Madrid E] gi|6225942|sp|Q9ZD21|RF1_RICPR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|3861078|emb|CAA14978.1| PEPTIDE CHAIN RELEASE FACTOR 1 (prfA) [Rickettsia prowazekii] gi|292572142|gb|ADE30057.1| Peptide chain release factor RF-1 [Rickettsia prowazekii Rp22] Length = 355 Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 136/357 (38%), Positives = 201/357 (56%), Gaps = 29/357 (8%) Query: 8 NCLGGLFDWDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 N + L ++N ++LS F+ E L V++ K + + L+ A +F Sbjct: 6 NLVKILDKYENLGKKLSSGIIGDEFVKASKEYAELEDVVVKIKQYNKAKSELEEANNF-- 63 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYL 119 LE+AL+ ++ L+ + ++E SLL EADS A + Sbjct: 64 -----------RLEMALDNATLEMIDNEIHTLENLLPKLERAVRISLLPKDEADSKSAII 112 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 EV AG+GG E+ +A +L MY R++E + ++ E L I D G K A+ IKG + + Sbjct: 113 EVRAGSGGEEAALFAAVLFNMYQRYSEFKGWRFEILAISDTGIGGYKEASASIKGKDVFS 172 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E GVHR+ RI +S R HTS +++ V P + I+I+I + D RIDTYRASGAG Sbjct: 173 KLKFESGVHRVQRIPETESQGRIHTSAATVAVLPEAE-GIDIKIEDKDLRIDTYRASGAG 231 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVNTTDSAVRITHIPTG+ V Q E+SQHKNKA+A +LRA+LYE + +++E+ Sbjct: 232 GQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQ--ERS 289 Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352 +S + ++G G +IR+Y P V D R N+ +V+ G LD+F++A +A Sbjct: 290 DSRRGQVGSGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIA 345 >gi|269102026|ref|ZP_06154723.1| peptide chain release factor 1 [Photobacterium damselae subsp. damselae CIP 102761] gi|268161924|gb|EEZ40420.1| peptide chain release factor 1 [Photobacterium damselae subsp. damselae CIP 102761] Length = 362 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 118/291 (40%), Positives = 174/291 (59%), Gaps = 10/291 (3%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHA 123 D+L E EDD + + + ++ K E+E + E +L D ND +LE+ A Sbjct: 60 DDLAAAEEMANEDDAEMREMAQEEIKEAKAEIERLEDELQVLLIPKDPNDERNCFLEIRA 119 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG E+ +A L RMY+R+AE+R ++ E + +D E G K + G AYG LK Sbjct: 120 GAGGDEAGIFAGDLFRMYSRYAERRGWRIEVMSANDAEHGGYKEMIAKVTGDGAYGVLKF 179 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ V P + ++ EI+ SD +IDTYR+SGAGGQHV Sbjct: 180 ESGGHRVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINPSDLKIDTYRSSGAGGQHV 239 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR A + + Sbjct: 240 NTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRH--AEEASTRR 297 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R + ++V++GD+D ++ L Sbjct: 298 NLLGSGDRSDRIRTYNY-PQGRVSDHRITLTIYRLNEVMEGDVDCLIQPVL 347 >gi|311693603|gb|ADP96476.1| peptide chain release factor 1 [marine bacterium HP15] Length = 362 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 153/235 (65%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY R+AE+R+++ E L +GE G K + Sbjct: 109 DGKNVFLEIRAGTGGDEAAIFAGDLFRMYLRYAERRRWQVEVLSESEGEHGGFKELIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P D++ IE++++D R+DT Sbjct: 169 AGDGVYGALKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAIELNKADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A ++L ++L E +++ Sbjct: 229 FRASGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAETERQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ ++ E+ K+ +G G +IR+Y P V D R N+ +V+ GDLD Sbjct: 289 QK--SMAETRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGDLD 340 >gi|313497099|gb|ADR58465.1| PrfA [Pseudomonas putida BIRD-1] Length = 360 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 118/285 (41%), Positives = 171/285 (60%), Gaps = 18/285 (6%) Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEA---------DSNDA---YLEVHAGAGGTES 130 ++L+++ +L+ + +E + E LL+ EA D ND +LE+ AG GG E+ Sbjct: 67 ALLKDSDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AEKR ++ E L ++GE G K ++G N YG LK E G HR+ Sbjct: 127 AIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P D+ IEI+ +D R+DTYRASGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++ + I K +G G Sbjct: 247 RITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA--IASERKLLVGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ S D+L G +D ++ LA Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348 >gi|225630064|ref|YP_002726855.1| peptide chain release factor 1 [Wolbachia sp. wRi] gi|225592045|gb|ACN95064.1| peptide chain release factor 1 [Wolbachia sp. wRi] Length = 357 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 110/250 (44%), Positives = 160/250 (64%), Gaps = 8/250 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L E DS +A LE+ AG GG E+ +A ML RMY ++AE+R +K E + I + G K Sbjct: 101 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 160 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A+ LI G + LK E GVHR+ R+ +S+ R HTS +++ + P V++ ++ +I E Sbjct: 161 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEE-VDFKIEEK 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YR+SG GGQ VNTTDSAVR+TH+PTG+VV Q E+SQHKNKA+A +LRA+LYE Sbjct: 220 DLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYE 279 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGD 342 +E QK+E K++IG G +IR+Y P + D R N+ ++ +G+ Sbjct: 280 IERQKKE--MERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGE 336 Query: 343 LDDFMKATLA 352 LD+F++A ++ Sbjct: 337 LDEFIEALIS 346 >gi|42520141|ref|NP_966056.1| peptide chain release factor 1 [Wolbachia endosymbiont of Drosophila melanogaster] gi|58698355|ref|ZP_00373269.1| peptide chain release factor 1 [Wolbachia endosymbiont of Drosophila ananassae] gi|81652805|sp|Q73IC2|RF1_WOLPM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|42409878|gb|AAS13990.1| peptide chain release factor 1 [Wolbachia endosymbiont of Drosophila melanogaster] gi|58535109|gb|EAL59194.1| peptide chain release factor 1 [Wolbachia endosymbiont of Drosophila ananassae] Length = 359 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 110/250 (44%), Positives = 160/250 (64%), Gaps = 8/250 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L E DS +A LE+ AG GG E+ +A ML RMY ++AE+R +K E + I + G K Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 162 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A+ LI G + LK E GVHR+ R+ +S+ R HTS +++ + P V++ ++ +I E Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEE-VDFKIEEK 221 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YR+SG GGQ VNTTDSAVR+TH+PTG+VV Q E+SQHKNKA+A +LRA+LYE Sbjct: 222 DLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYE 281 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGD 342 +E QK+E K++IG G +IR+Y P + D R N+ ++ +G+ Sbjct: 282 IERQKKE--MERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGE 338 Query: 343 LDDFMKATLA 352 LD+F++A ++ Sbjct: 339 LDEFIEALIS 348 >gi|146306094|ref|YP_001186559.1| peptide chain release factor 1 [Pseudomonas mendocina ymp] gi|166223589|sp|A4XR61|RF1_PSEMY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145574295|gb|ABP83827.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas mendocina ymp] Length = 360 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 112/246 (45%), Positives = 153/246 (62%), Gaps = 12/246 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLEV AG GG E+ ++ L RMY+R+AEK+ ++ E L ++GE G K + Sbjct: 109 DGRNVYLEVRAGTGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ +D R+DT Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSA+RITHIPTG VV+CQ+ERSQHKN+A+A L AK LQ + Sbjct: 229 YRSSGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAK-----LQDQ 283 Query: 293 EEIA---NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E A I E+ K +G G +IR+Y P V D R N+ S S+V+ G ++ Sbjct: 284 QEAAAHKEISETRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLSEVMAGGVEAV 342 Query: 347 MKATLA 352 ++ LA Sbjct: 343 IEPLLA 348 >gi|326493842|dbj|BAJ85383.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 236 Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 151/221 (68%), Gaps = 5/221 (2%) Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L+ RW K+++K+ +E GEEAGIKSAT+ ++G AYG+L GE+G HR+VR SP+ Sbjct: 7 LVAPTPRWGGKQRYKSRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPF 66 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R TSF+ + V P++ ++S+++EI E D I RA G GGQ+VN ++AVR+ HI Sbjct: 67 NAKGLRQTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHI 126 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIR 313 PTG+ V+C +ERSQ NK +A L+AKL + E Q+ EI I G++ K E WG+QIR Sbjct: 127 PTGIAVRCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIR 184 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +YV PY++VKD+RT E + S V+DG+LD F+KA L K Sbjct: 185 NYVFHPYKLVKDVRTACETSDISGVMDGELDPFIKAYLQYK 225 >gi|118588514|ref|ZP_01545923.1| peptide chain release factor 1 [Stappia aggregata IAM 12614] gi|118439220|gb|EAV45852.1| peptide chain release factor 1 [Stappia aggregata IAM 12614] Length = 357 Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 113/236 (47%), Positives = 151/236 (63%), Gaps = 9/236 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EADSNDA LEV AG GG E+ +A L RMY R+AE + +K E L +GE G K Sbjct: 104 EADSNDAILEVRAGTGGDEAALFAGDLFRMYQRYAELQGWKVEILSASEGEVGGYKEVIA 163 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G N + LK E GVHR+ R+ +S R HTS +++ V P +D ++I++ ESD RI Sbjct: 164 SVSGENVFAKLKFESGVHRVQRVPATESGGRIHTSAATVAVLPQAED-VDIDVQESDLRI 222 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYRASGAGGQHVNTTDSAVRITH+PTG+VV Q ERSQHKNKA+A +LRA++Y+ + Sbjct: 223 DTYRASGAGGQHVNTTDSAVRITHLPTGIVVAVQDERSQHKNKARAMQLLRARIYD---E 279 Query: 291 KREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +RE A+ E+ + ++G G +IR+Y P V D R + +L G+ Sbjct: 280 ERERAASERTEARRLQVGSGDRSERIRTYNY-PQGRVTDHRIGLTLYKLEQILSGE 334 >gi|291547175|emb|CBL20283.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp. SR1/5] Length = 358 Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 127/349 (36%), Positives = 207/349 (59%), Gaps = 14/349 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD D+ + R L + +P + + + LM+E+ L + KE + + + D Sbjct: 1 MFDKLDDLLVRFEELLNELGEPGVTDDPAHFQKLMKEQSDLQPIVDAYKEYKKNKETIED 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126 +L +LE +E+ +L +E SD +R++ E+E++ LL + DS + +E+ GAG Sbjct: 61 SLSMLESEKDEEMREMLKEELSDAKKRVE-ELEHELKILLLPKDPNDSKNVIVEIRGGAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A + RMY ++AE R++KTE L +++ G K T +IKG AY LK E G Sbjct: 120 GDEAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIKGEGAYSRLKYESG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ + P ++ I+ + ++C+ D +RASG GGQ VNTT Sbjct: 180 VHRVQRVPETESGGRIHTSTCTVAIMPEAEE-IDFHLDLNECKFDVFRASGNGGQCVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LYE+EL K+ + E+ +++I Sbjct: 239 DSAVRLTHIPTGIVISCQDEKSQLKNKDKALRVLRSRLYEMELAKQHDAE--AEARRSQI 296 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G G +IR+Y P V D R + ++L+GDLD+ + + +A Sbjct: 297 GTGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLENILNGDLDEIIDSLIA 344 >gi|302872094|ref|YP_003840730.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis OB47] gi|302574953|gb|ADL42744.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis OB47] Length = 355 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 128/336 (38%), Positives = 189/336 (56%), Gaps = 15/336 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDC 82 L K DP + E + LM+E +L + +E I + + + LL+ L+ED Sbjct: 15 LEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKKILNTIKEAEELLDTDLDEDFE 74 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMY 141 +++E + + K VE + LL + D + +E+ AGAGG E+ +A L RMY Sbjct: 75 KLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRMY 134 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 +R+AE++ +K E + + + G K +I G AY LK E GVHR+ R+ +S R Sbjct: 135 SRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGGR 194 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P V+D +E+EI E D IDT+RA GAGGQHVN T+SAVRI H PTG+VV Sbjct: 195 IHTSTATVAVLPEVED-VEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGIVV 253 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSYV 316 CQ ERSQH N+ +A +LRA+LY+ LQ++E I ++++G G +IR+Y Sbjct: 254 TCQDERSQHANRDRAMKILRARLYDYYQSLQQKE----IESQRRSQVGTGDRSERIRTYN 309 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + VLDGDLD+ + A + Sbjct: 310 F-PQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALIT 344 >gi|237756512|ref|ZP_04585042.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691328|gb|EEP60406.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense SS-5] Length = 360 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 112/243 (46%), Positives = 151/243 (62%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ GAGG E+ +A L RMY R+AE+ +KTE L +H E+ GIK LI Sbjct: 110 DERNVILEIRQGAGGDEASLFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALI 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E GVHR+ R+ +S+ R HTS ++ V P ++ ++IEI + RI+T Sbjct: 170 KGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTVTVAVLPEAEE-VDIEIKPEELRIET 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RA GAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ +NK +A +LRA+L + +R Sbjct: 229 MRAGGAGGQHVNTTDSAVRITHIPTGMVVTCQDERSQLQNKMKAMQILRARLK--DYYER 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E I + K ++G G +IR+Y P V D R N +D++DGDLD+ + Sbjct: 287 LEKEKIAKERKEQVGTGERSEKIRTYNF-PQNRVTDHRVNYTSYRINDIMDGDLDEIIDV 345 Query: 350 TLA 352 +A Sbjct: 346 LIA 348 >gi|325273244|ref|ZP_08139524.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51] gi|324101621|gb|EGB99187.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51] Length = 360 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 117/285 (41%), Positives = 171/285 (60%), Gaps = 18/285 (6%) Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEA---------DSNDA---YLEVHAGAGGTES 130 ++L+++ +++ + +E + E LL+ EA D ND +LE+ AG GG E+ Sbjct: 67 ALLKDSDPDMREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AEKR ++ E L ++GE G K ++G N YG LK E G HR+ Sbjct: 127 AIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P D+ IEI+ +D R+DTYRASGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++ + I K +G G Sbjct: 247 RITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA--IASERKLLVGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ S D+L G +D ++ LA Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348 >gi|257092416|ref|YP_003166057.1| peptide chain release factor 1 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044940|gb|ACV34128.1| peptide chain release factor 1 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 360 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 153/243 (62%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A L RMYTR+AE+R+++ E + + G + I Sbjct: 107 DERNVFLEIRAGTGGDESALFAGNLFRMYTRYAERRRWQVEVISASASDLGGYREIIARI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ ++ R HTS ++ V P D E++++ +D RIDT Sbjct: 167 IGSDVYARLKFESGAHRVQRVPDTEAQGRIHTSACTVAVMPEADALEEVQVNPADIRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITH+PTGVVV+CQ +RSQHKNKAQA ++L A++ ++Q+R Sbjct: 227 YRASGAGGQHINKTDSAVRITHLPTGVVVECQDDRSQHKNKAQAMSVLVARIR--DMQER 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A+I ++ +G G +IR+Y P V D R N+ ++DGDLD+ + A Sbjct: 285 EQDASIASERRSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKIDAIMDGDLDELLGA 343 Query: 350 TLA 352 A Sbjct: 344 LTA 346 >gi|157803730|ref|YP_001492279.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel] gi|166223597|sp|A8EYR1|RF1_RICCK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157784993|gb|ABV73494.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel] Length = 355 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 135/349 (38%), Positives = 202/349 (57%), Gaps = 29/349 (8%) Query: 16 WDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 ++N ++LS F+ E L + V + K + + L+ A +F E+ D Sbjct: 14 YENLGKKLSSGIMGDEFVKASKEYAELEEVVEKIKEYNKAKSELEEANNFKLEVG---LD 70 Query: 69 NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 N L + ED+ L+ + L+R +K+ + L EADS A +EV AG+GG Sbjct: 71 NATL---EMIEDEIHTLENSLPKLERAVKIAL-------LPKDEADSKSAIIEVRAGSGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L MY R+AE + + E L I D G K A+ IKG + + LK E GV Sbjct: 121 EEAALFAAILFNMYQRYAELKGWHFEILAIVDTGIGGYKEASASIKGKDVFSKLKCESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S+ R HTS +++ V P V+D ++I++ + D RIDTYR+SGAGGQHVNTT+ Sbjct: 181 HRVQRIPETESHGRIHTSAATVAVLPEVED-VDIKLEDKDLRIDTYRSSGAGGQHVNTTN 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E +K+E+ + + ++G Sbjct: 240 SAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ--KRANNRRGQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 G +IR+Y P V D R N+ +V+ +G LD+F+ A +A Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVDALIA 345 >gi|124004130|ref|ZP_01688976.1| peptide chain release factor 1 [Microscilla marina ATCC 23134] gi|123990200|gb|EAY29699.1| peptide chain release factor 1 [Microscilla marina ATCC 23134] Length = 356 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 116/263 (44%), Positives = 164/263 (62%), Gaps = 10/263 (3%) Query: 91 NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 N Q+ K+E E K L+ + DS + LE+ GAGG E+ +A LLRMY R+AEKRK Sbjct: 85 NPQKEKIEEELKTL--LIPKDPNDSKNVILEIRGGAGGDEAAIFAGDLLRMYQRFAEKRK 142 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E ++ DG G K I G + YG +K E GVHR+ R+ ++ R HTS +S+ Sbjct: 143 WKFELMDFTDGSSGGFKEVVCSISGEDVYGMMKYESGVHRVQRVPATETQGRVHTSAASV 202 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++D +E+ I SD R D + +SG GGQ VNTT SAVR+THIPTG+VV CQ E+SQ Sbjct: 203 AVLPEMED-VEVNIDPSDVRSDYFCSSGPGGQSVNTTYSAVRLTHIPTGIVVSCQDEKSQ 261 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326 KNKA+A +LR+KLYE+EL K++E +G K+ +G G +IR+Y P V D Sbjct: 262 IKNKAKAMKVLRSKLYEIELSKQQE--ELGAQRKSMVGSGDRSDKIRTYNY-PQGRVTDH 318 Query: 327 RTNIEKTSPSDVLDGDLDDFMKA 349 R + +V+DG++ DF+++ Sbjct: 319 RIKYTVHNLPNVMDGEIADFIES 341 >gi|291288202|ref|YP_003505018.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM 12809] gi|290885362|gb|ADD69062.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM 12809] Length = 356 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 132/345 (38%), Positives = 193/345 (55%), Gaps = 23/345 (6%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L D + ++F T E L V + + E++ +D A S IK D+ D + L Sbjct: 19 LVDPELMKDNMAFQKTAKEHAELKPVVERYEEYLAEKEAVDEAHSIIKTSDDK--DLVEL 76 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131 E+ LEE +L E D L++ SLL+ + D + +LE+ AG GG E+ Sbjct: 77 AEMELEEKK-GVLDELEDELKK-----------SLLTKDPYDDKNIFLEIRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LL+MYT++AE +K E ++ ++ G K L+KG AY LK E G HR+ Sbjct: 125 LFAGDLLKMYTKYAEMNGWKVEVVDFNETGVGGYKEVVALVKGHGAYSKLKFEAGGHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P +D +++ I + D RID +RASGAGGQHVNTTDSAVR Sbjct: 185 RVPETESGGRIHTSACTVAVLPEAED-VDVHIEQKDLRIDVFRASGAGGQHVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTGVVV CQ ERSQ KN+ +A +L++K+ E E+QK++ S K ++G G Sbjct: 244 MTHIPTGVVVSCQDERSQIKNREKAMKLLKSKILEAEIQKKQSAE--AASRKLQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IR+Y P V D R E + L G+++D + AT+A Sbjct: 302 SERIRTYNF-PQNRVTDHRIK-ESANLDRFLLGEMEDMIDATIAF 344 >gi|188996904|ref|YP_001931155.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931971|gb|ACD66601.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1] Length = 360 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 111/243 (45%), Positives = 151/243 (62%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ GAGG E+ +A L RMY R+AE+ +KTE L +H E+ GIK LI Sbjct: 110 DEKNVILEIRQGAGGDEASLFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALI 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E GVHR+ R+ +S+ R HTS ++ V P ++ ++IEI + +I+T Sbjct: 170 KGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTVTVAVLPEAEE-VDIEIKPEELKIET 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RA GAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ +NK +A +LRA+L + +R Sbjct: 229 MRAGGAGGQHVNTTDSAVRITHIPTGMVVTCQDERSQLQNKMKAMQILRARLK--DYYER 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E I + K ++G G +IR+Y P V D R N +D++DGDLD+ + Sbjct: 287 LEKEKIAKERKEQVGTGERSEKIRTYNF-PQNRVTDHRVNYTSYRINDIMDGDLDEIIDV 345 Query: 350 TLA 352 +A Sbjct: 346 LIA 348 >gi|239996062|ref|ZP_04716586.1| peptide chain release factor 1 [Alteromonas macleodii ATCC 27126] Length = 361 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 193/339 (56%), Gaps = 11/339 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V+R + DP + + + + L +E L++ ++ Q + +NL + L E Sbjct: 13 VERFEEVQALLGDPGVIGDQDKFRNLSKEFSQLEDVVAGFNAYQ-QAQENLASAQEMLNE 71 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWAN 135 DD + + + ++ K E+E + E L D N+ +LE+ AGAGG E+ +A Sbjct: 72 DDAEMREMAQEEMKDAKAEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAIFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE R ++ E + ++GE G K + G YG LK E G HR+ R+ Sbjct: 132 DLFRMYSRYAESRGWRVELVNANEGEHGGYKEVIANVSGDGVYGVLKFESGGHRVQRVPE 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S IEI+ ++ RIDT+RASGAGGQHVN TDSA+RITH+ Sbjct: 192 TESQGRIHTSACTVAVLPEIPESQAIEINPAELRIDTFRASGAGGQHVNKTDSAIRITHL 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKN+A+A ++L+A+L ++E +KR + K+ +G G +I Sbjct: 252 PTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEA--STRKSLVGSGDRSERI 309 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++GDL + L Sbjct: 310 RTYNF-PQGRVTDHRINLTIYRLDEVVEGDLKQLIDPIL 347 >gi|313905737|ref|ZP_07839097.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6] gi|313469444|gb|EFR64786.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6] Length = 360 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 133/351 (37%), Positives = 197/351 (56%), Gaps = 17/351 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +F+ VQ RL + + DP + + LM+E+ L ++ ++ + D Sbjct: 1 MFEKLEDVQIRLDEILCQLSDPATAGDSARMQKLMKEQAELSPVAEMYAAYRKNEETISD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSND---AYLEVHAG 124 +L LLE E D + + + LQ K +Y++ LL D ND +E+ AG Sbjct: 61 SLELLE---SESDPDMREMLKEELQEAKANRSKYERELQLLLLPKDPNDDKSVIVEIRAG 117 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A + RMY R+AEK++++TE + I + G+K + I G AY LK E Sbjct: 118 AGGEEAALFAYEIYRMYVRYAEKQRWQTELMSIDETGLGGLKECSFEISGSGAYSKLKYE 177 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS ++ V P VDD I+IEI + D RID RASG GGQ VN Sbjct: 178 SGVHRVQRVPATESGGRIHTSTITVAVMPKVDDDIQIEIPDKDVRIDVMRASGNGGQCVN 237 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+TH PTG+V+ Q E+SQ +NKA+AW +LR+KLY LE++KR + + ++ Sbjct: 238 TTDSAVRLTHYPTGIVIYSQTEKSQIQNKAKAWELLRSKLYVLEMEKRHDAE--ADLRRS 295 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IG G +IR+Y P V D R + +L+GDLD+ ++ A Sbjct: 296 QIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHQIDSILNGDLDELIQTLTA 345 >gi|26987469|ref|NP_742894.1| peptide chain release factor 1 [Pseudomonas putida KT2440] gi|32171521|sp|Q88PW5|RF1_PSEPK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|24982133|gb|AAN66358.1|AE016264_2 peptide chain release factor 1 [Pseudomonas putida KT2440] Length = 360 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 117/285 (41%), Positives = 171/285 (60%), Gaps = 18/285 (6%) Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEA---------DSNDA---YLEVHAGAGGTES 130 ++L+++ +L+ + +E + E LL+ EA D ND +LE+ AG GG E+ Sbjct: 67 ALLKDSDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AEKR ++ E L ++GE G K ++G N YG LK E G HR+ Sbjct: 127 AIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P D+ IEI+ +D R+DTYRASGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++ + + K +G G Sbjct: 247 RITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA--LASERKLLVGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ S D+L G +D ++ LA Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLA 348 >gi|253580116|ref|ZP_04857383.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39B_FAA] gi|251848635|gb|EES76598.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39BFAA] Length = 358 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 124/348 (35%), Positives = 203/348 (58%), Gaps = 12/348 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD D+ + R + + +P + N + LM+E+ L + +E + + + D Sbjct: 1 MFDKLDDLLIRFEEVLNELGEPGVTDNQEHFQKLMKEQSDLQPIVDAYREYKKNKETIQD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGG 127 +L +LE +ED +L+E ++ E+E++ LL + + N + +E+ AGAGG Sbjct: 61 SLSMLEEEKDEDMREMLKEELSEAKKNVEELEHELKILLLPKDPNDNKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++AE R++KTE + +++ G K T +I G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMITGAGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P ++ I+ + +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMPEAEE-IDFHLDMNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LYE+EL K+ + E+ +++IG Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHDAE--AEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R + +VL+GDLD+ + + +A Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLENVLNGDLDEIIDSLIA 344 >gi|76664975|emb|CAJ17928.1| protein chain release factor 2 [Candidatus Phytoplasma solani] Length = 175 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 96/166 (57%), Positives = 122/166 (73%), Gaps = 1/166 (0%) Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SP+DSN++RHTSF S V P + D I+I + D +ID +R+SGAGGQHVNTTD Sbjct: 1 HRLVRVSPFDSNAKRHTSFVSCDVLPEIKDEIKINVKPEDLKIDVFRSSGAGGQHVNTTD 60 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEI 306 SAVRITH+PTG+VV CQ ERSQ KN+ +A ML+ KL++L L +++EE +S + EI Sbjct: 61 SAVRITHLPTGLVVGCQNERSQIKNREKALQMLKTKLFQLALKEQKEETVKQFQSDQKEI 120 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYV PY+MVKD RTN E V+DG+LDDF+ L Sbjct: 121 GWGSQIRSYVFHPYKMVKDHRTNQENFQLEQVMDGNLDDFINGYLT 166 >gi|315186593|gb|EFU20352.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta thermophila DSM 6578] Length = 357 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 128/338 (37%), Positives = 189/338 (55%), Gaps = 17/338 (5%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILLELALE 78 R L T DP ++ + + L +E HL + + ++ RL + +LE E Sbjct: 13 RFKELETALADPSVFNDQKRYRELAQEHAHLSQVVRTAEHYRRLEARLEEAKTVLE---E 69 Query: 79 EDDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWA 134 EDD + + + ++ ++ E+ +Q LL D D LE+ AG GG E+ +A Sbjct: 70 EDDHELKEMAREEIKALEGEIARTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEEAALFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E +E + E G + I G YG L+ E G HR+ RI Sbjct: 130 ADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHRVQRIP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P +++ E+EI D R+D +R+SG GGQ VNTTDSAVRITH Sbjct: 190 VTESGGRIHTSAVTVAVLPEPEET-EVEIRPEDIRVDVFRSSGPGGQSVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV CQ E+SQHKNKA+A +LRA+LYE+E Q++E + +++IG G + Sbjct: 249 LPTGLVVSCQDEKSQHKNKAKALKILRARLYEMEKQRQE--SERAAMRRSQIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 IR+Y P V D R N+ V+DGDLD+ + A Sbjct: 307 IRTYNF-PQNRVTDHRINLTLYKLEAVMDGDLDEIIDA 343 >gi|328542097|ref|YP_004302206.1| peptide chain release factor 1 [polymorphum gilvum SL003B-26A1] gi|326411847|gb|ADZ68910.1| Peptide chain release factor 1 [Polymorphum gilvum SL003B-26A1] Length = 357 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 112/242 (46%), Positives = 153/242 (63%), Gaps = 8/242 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+NDA LEV AG GG E+ +A L RMY R+A+ + +K E L +GE G K Sbjct: 105 ADTNDAILEVRAGTGGDEAALFAGDLFRMYQRYADLKGWKVEILSASEGEMGGFKEVIAS 164 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G N + LK E GVHR+ R+ +S R HTS +++ V P +D ++I++ +SD RID Sbjct: 165 VSGENVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPQAED-VDIDVHDSDLRID 223 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYRASGAGGQHVNTTDSAVRITH+PTG+VV Q ERSQHKNKA+A +LRAK+Y+ E +K Sbjct: 224 TYRASGAGGQHVNTTDSAVRITHLPTGIVVAVQDERSQHKNKAKAMQLLRAKIYDAEREK 283 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 + E+ + ++G G +IR+Y P V D R + V+ G+ LD+ + Sbjct: 284 --AASERTEARRLQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKLDQVISGEALDEVI 340 Query: 348 KA 349 A Sbjct: 341 DA 342 >gi|125975076|ref|YP_001038986.1| peptide chain release factor 1 [Clostridium thermocellum ATCC 27405] gi|256003270|ref|ZP_05428262.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360] gi|281418506|ref|ZP_06249525.1| peptide chain release factor 1 [Clostridium thermocellum JW20] gi|166223552|sp|A3DIL4|RF1_CLOTH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|125715301|gb|ABN53793.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium thermocellum ATCC 27405] gi|255992961|gb|EEU03051.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360] gi|281407590|gb|EFB37849.1| peptide chain release factor 1 [Clostridium thermocellum JW20] gi|316939241|gb|ADU73275.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313] Length = 360 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 128/324 (39%), Positives = 188/324 (58%), Gaps = 15/324 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72 + A R +N + DP + N E K LM+E L+ ++ K++ + D + Sbjct: 5 FQAAENRYDEINHRLSDPAVIANQDEYKKLMKEHAELEVLVTKYNEYKKLTKEIADAKEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130 L L+++ +++ Q KLEV K+ + LL D + +E+ GAGG E+ Sbjct: 65 LNEKLDKEFREMVETELKEAQE-KLEVLKKEMKILLLPKDPNDERNVIVEIRGGAGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYTR+AE+ +KTE L+ + E G K I+G AY LK E GVHR+ Sbjct: 124 ALFAGDLFRMYTRYAERNGWKTEILDSNPTEIGGFKEVVFSIEGNGAYSRLKFESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++N R HTS ++ V P ++ I++EI+ +D RIDTYRASGAGGQH+N TDSA+ Sbjct: 184 QRVPVTEANGRVHTSTVTVAVLPEAEE-IDVEINPNDLRIDTYRASGAGGQHINKTDSAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG 309 RITH+PTG+VV CQ +RSQHKNK +A +LR+KLYE+ RE+ N I + K+++G G Sbjct: 243 RITHLPTGLVVCCQDQRSQHKNKEKAMKVLRSKLYEM---AREQQHNEIAQERKSQVGTG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNI 330 +IR+Y P V D R + Sbjct: 300 DRSERIRTYNF-PQGRVTDHRIGL 322 >gi|302847640|ref|XP_002955354.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f. nagariensis] gi|300259426|gb|EFJ43654.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f. nagariensis] Length = 242 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 104/227 (45%), Positives = 148/227 (65%), Gaps = 6/227 (2%) Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA ML RMY RWAE++ ++ GEEAG+KS L + G YG+L+ E+G HRLV Sbjct: 2 DWAEMLERMYLRWAEQQGHGVRLVDRAPGEEAGVKSVELEVAGRYVYGYLRAEKGTHRLV 61 Query: 192 RISPYDSNSRRHTSFSSIWVYPVV--DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 R SP+++ R TSF+ + V PV+ D +++++E D T R+ G GGQ+VN ++ Sbjct: 62 RNSPFNAKGLRQTSFAGVDVMPVLGPGDLPDLDLNERDLEFSTMRSGGKGGQNVNKVETG 121 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK-LYELELQKREEIANI-GESSKTEIG 307 VRI H+PTG+ V+C QERSQ +N+ A ++L+++ L LE Q +A I G+ K E Sbjct: 122 VRIVHLPTGISVKCTQERSQSQNREIAMDILKSRLLVVLEEQNARRVAEIRGDLVKAE-- 179 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG+QIR+YV PY++VKD RT +E + + VLDGDL DFM A L +K Sbjct: 180 WGQQIRNYVFHPYKLVKDTRTGVETSDVAAVLDGDLADFMAAYLRMK 226 >gi|332290276|ref|YP_004421128.1| peptide chain release factor 1 [Gallibacterium anatis UMN179] gi|330433172|gb|AEC18231.1| peptide chain release factor 1 [Gallibacterium anatis UMN179] Length = 360 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 106/242 (43%), Positives = 157/242 (64%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++TE L ++ E+ G K + I Sbjct: 107 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRTEVLSANESEQGGYKEIIVKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 167 SGENVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESALPEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +++ Sbjct: 227 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRLVQAEEERK 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 A ++ ++ +G G +IR+Y P V D R N+ ++++G +DD ++ Sbjct: 287 --AAEQADTRRSLLGSGDRSDKIRTYNY-PQGRVTDHRINLTLYRLDEIMNGKIDDLIQP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|262038076|ref|ZP_06011481.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264] gi|261747896|gb|EEY35330.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264] Length = 359 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 110/244 (45%), Positives = 159/244 (65%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A + RM+TR+AE+ ++KTE ++ + G+K T LI Sbjct: 106 DDKNVIMEIRAGAGGDEAALFAADVFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E GVHR+ R+ +++ R HTS ++ V P ++D E+EI++SD +IDT Sbjct: 166 KGNGAYSRLKFESGVHRVQRVPATEASGRIHTSTITVAVLPEIEDVNEVEINQSDLKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291 YR+SGAGGQHVNTTDSAVRITH+PTG+VV Q RSQ KN+ A +L +KLYE+E +K Sbjct: 226 YRSSGAGGQHVNTTDSAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQ 285 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+E+ + ++++G G +IR+Y P V D R + VLDGDLD+ + Sbjct: 286 RKEVES---ERRSQVGSGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMID 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALIA 345 >gi|260767753|ref|ZP_05876688.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972] gi|260617262|gb|EEX42446.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972] gi|315179416|gb|ADT86330.1| peptide chain release factor 1 [Vibrio furnissii NCTC 11218] Length = 362 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 128/346 (36%), Positives = 194/346 (56%), Gaps = 11/346 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L ++ V+R + DP + + + + L +E L+ + Q + D+L Sbjct: 6 LVKLESLVERYEEVQHLLGDPAVIGDQDKFRALSKEYSQLEEITHCFQAYQ-QAQDDLSA 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E +EDD + + D ++ K E+E E +L D ND +LE+ AGAGG Sbjct: 65 AEEMAKEDDAEMREMAQDEIKVAKAEIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+R+AEKR ++ E + ++ E G K + G AYG LK E G H Sbjct: 125 EAGIFAGDLFRMYSRFAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ V V ++ EI +D +IDT+R+SGAGGQHVNTTDS Sbjct: 185 RVQRVPATESQGRVHTSACTVAVMAEVPEAEIPEIRTADLKIDTFRSSGAGGQHVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR A I ++ + +G Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAKAEEEKR--AAAISDTRRNLLGS 302 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R N+ S+V++GDL + + Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTVYRLSEVMEGDLQSLVDPVI 347 >gi|289523200|ref|ZP_06440054.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503743|gb|EFD24907.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 358 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 129/341 (37%), Positives = 200/341 (58%), Gaps = 12/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72 D+ ++ L TK DP + N + L +E + + +E Q RL + L L Sbjct: 8 LDDLERKYQELETKLSDPDVISNPAVLQRLAKEHSEMSKVVEKYREYRQAQKRLEEALAL 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131 E +ED + +E ++ L+ I E+E + LL + D +E+ AGAGG E+ Sbjct: 68 TE-EDDEDLRELAREEANQLKNIVEELEEELALLLLPKDPNDERSVIVEIRAGAGGEEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+AE++++K E L ++ G K ++G +AY LK E GVHR+ Sbjct: 127 LFAADLYRMYVRYAERKRWKVELLTANETGIGGYKEIVFRVEGQDAYSVLKYESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P D+ +++EI D +IDT+RASGAGGQ+VN TDSAVR Sbjct: 187 RVPVTEASGRIHTSTATVAVLPEPDE-VDVEIRPEDLKIDTFRASGAGGQYVNMTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV CQ ERSQ KN+A+A +LRAKLY++E+++++E + + +IG G Sbjct: 246 ITHIPTGIVVTCQDERSQLKNRAKAMQLLRAKLYDMEIRRQQEA--MASERRGQIGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + + ++L+GDLD+ + A Sbjct: 304 SERIRTYNF-PQNRVTDHRIGLTLHNLDEILEGDLDELLYA 343 >gi|150015294|ref|YP_001307548.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB 8052] gi|189039964|sp|A6LQG2|RF1_CLOB8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|149901759|gb|ABR32592.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB 8052] Length = 360 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 125/334 (37%), Positives = 192/334 (57%), Gaps = 11/334 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDC 82 L+ K DP + QN E + L +E L+ N+ K++ + L N +L +++ Sbjct: 16 LSVKISDPSIMQNQNEWRKLCKEHADLEVIVNSYREYKKVVEDLKANKEMLSGESDKEMR 75 Query: 83 SILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 +L E +L + ++E + Q L D + ++E+ GAGG E+ +A L RMY Sbjct: 76 EMLNEEITDLTNREEQLETEIQILLLPKDPNDDKNVFVEIRGGAGGEEAALFAYNLFRMY 135 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TR+AE +++ E + +++ + G K +IKG AY LK E GVHR+ R+ +S+ R Sbjct: 136 TRYAETQRWGVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVPDTESSGR 195 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P VDD +EIE+++ D RID +RASG GGQ VNTTDSAVRITH+PTG+VV Sbjct: 196 IHTSTATVAVLPEVDD-VEIEVADKDVRIDVFRASGNGGQCVNTTDSAVRITHLPTGLVV 254 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 CQ E+SQ KNK +A +L+++LY E +RE I E K+++G G +IR+Y Sbjct: 255 SCQDEKSQLKNKEKAMKVLKSRLY--EQAERERAQGIAEDRKSQVGTGDRSERIRTYNY- 311 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P + D R + L GD+D+ + A + Sbjct: 312 PQGRITDHRIGLTLYKLDTFLGGDIDEMINALIT 345 >gi|310829178|ref|YP_003961535.1| peptide chain release factor 1 [Eubacterium limosum KIST612] gi|308740912|gb|ADO38572.1| peptide chain release factor 1 [Eubacterium limosum KIST612] Length = 357 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 127/334 (38%), Positives = 198/334 (59%), Gaps = 12/334 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC----DNLILLELALEEDD 81 LN K DP + + + + LM+E H++ I+ E + L +L + ++++D Sbjct: 15 LNEKIADPDIIADQAQWQKLMKEHAHIEPIINRYNEYKKTLEGIEESKEMLSDKSIDKDF 74 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140 + + D L K +E + LL + D + +E+ AGAGG+E+ +A L RM Sbjct: 75 EEMCKAELDELTERKAALEDELKVLLLPKDPNDDKNVIVEIRAGAGGSEAALFAGDLFRM 134 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 +TR+AE++ +K+E + + + GIK T I+G AY LK E GVHR+ RI +S Sbjct: 135 FTRYAERQGWKSEIMNSNIPDIGGIKEITFSIEGRGAYSRLKYESGVHRVQRIPSTESGG 194 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P +D +EI+I+ +D RID YR+SG GGQ VNTTDSAVRITH PTG+V Sbjct: 195 RIHTSTATVAVLPEAED-VEIDINPNDLRIDVYRSSGNGGQCVNTTDSAVRITHEPTGMV 253 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ E+SQ KNK +A +L+A+L+E+E+QK++ + I E+ K+++G G +IR+Y Sbjct: 254 VTCQDEKSQLKNKEKAMKVLKARLFEIEMQKQQ--SEIAENRKSQVGTGDRSERIRTYNF 311 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V D R + LDG++D+ + A + Sbjct: 312 -PQGRVTDHRIGMTVYQLEAFLDGEIDEMVDALI 344 >gi|149377994|ref|ZP_01895719.1| peptide chain release factor 1 [Marinobacter algicola DG893] gi|149357703|gb|EDM46200.1| peptide chain release factor 1 [Marinobacter algicola DG893] Length = 361 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 151/235 (64%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L +MY R+AE+++++ E + +GE G K I Sbjct: 109 DGKNVFLEVRAGTGGDEAAIFAGDLFKMYMRYAERQRWQVEVISASEGEHGGYKEVIARI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P D++ +EI++SD R+DT Sbjct: 169 AGSAVYGALKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADETEAVEINKSDLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITHIPTG+VV+CQ+ERSQHKN+A+A + L ++L E++++ Sbjct: 229 FRASGAGGQHVNKTDSAIRITHIPTGIVVECQEERSQHKNRAKAMSFLASRLQNEEIERQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + K+ +G G +IR+Y P V D R N+ +V+ GDLD Sbjct: 289 QK--TMAATRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVISGDLD 340 >gi|332306089|ref|YP_004433940.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173418|gb|AEE22672.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 362 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 122/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 +R + P + + + + L +E L+ + + Q D E+ ++E Sbjct: 13 TERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQSAQQDFESAQEM-MQE 71 Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135 D + + + + KL +E Y+ +L D ND ++E+ AGAGG E+ +A Sbjct: 72 SDPEMREMAQEEYKSSKLAIEQYEDELQILLLPKDPNDESNCFVEIRAGAGGDEAAIFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE R++K E + +++G+ G K I G AYG LK E G HR+ R+ Sbjct: 132 DLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGILKFESGGHRVQRVPE 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P V +S IE++++D +IDT+RASGAGGQHVN TDSA+RITH+ Sbjct: 192 TESQGRIHTSACTVVVMPEVAESEAIEVNKADLKIDTFRASGAGGQHVNKTDSAIRITHV 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+G+VV+CQ ERSQHKN+A+A +L+++L +LE +KR+ A + + + G +I Sbjct: 252 PSGIVVECQDERSQHKNRAKAMAVLQSRLNQLEEEKRQ--AEETSTRRNLVASGDRSERI 309 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ DV+ GDLD ++ Sbjct: 310 RTYNF-PQGRVTDHRINLTLYRLDDVVAGDLDAVLE 344 >gi|34763568|ref|ZP_00144503.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742325|ref|ZP_04572806.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13] gi|256845604|ref|ZP_05551062.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2] gi|294785107|ref|ZP_06750395.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27] gi|27886757|gb|EAA23895.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229429973|gb|EEO40185.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13] gi|256719163|gb|EEU32718.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2] gi|294486821|gb|EFG34183.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27] Length = 357 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 107/244 (43%), Positives = 150/244 (61%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A L RMY+R+AE++K+K E +E DGE GIK I Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDT Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRA GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 226 YRAGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + ++G G +IR+Y P + D R + LDGD+D+ + A Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342 Query: 350 TLAI 353 + Sbjct: 343 LITF 346 >gi|269138757|ref|YP_003295458.1| peptide chain release factor 1 [Edwardsiella tarda EIB202] gi|267984418|gb|ACY84247.1| peptide chain release factor 1 [Edwardsiella tarda EIB202] gi|304558750|gb|ADM41414.1| Peptide chain release factor 1 [Edwardsiella tarda FL6-60] Length = 360 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K + Sbjct: 107 DERDCFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P V ++ +I+ +D RIDT Sbjct: 167 SGDGAYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 YRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + + +G G ++R+Y P V D R N+ +V++G LD+ ++ Sbjct: 287 QQ--EVASTRRNLLGSGDRSDRVRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDNLIEP 343 Query: 350 TL 351 + Sbjct: 344 IV 345 >gi|113971503|ref|YP_735296.1| peptide chain release factor 1 [Shewanella sp. MR-4] gi|114046304|ref|YP_736854.1| peptide chain release factor 1 [Shewanella sp. MR-7] gi|119361605|sp|Q0HFC8|RF1_SHESM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361606|sp|Q0HYK8|RF1_SHESR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|113886187|gb|ABI40239.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp. MR-4] gi|113887746|gb|ABI41797.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp. MR-7] Length = 363 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 118/310 (38%), Positives = 181/310 (58%), Gaps = 7/310 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L+ ++ K Q L D E+ LEEDD + + + ++ K E+E Sbjct: 36 RALSKEYSQLEEVVAGFKAYQQALADLESAKEM-LEEDDAEMREMAQEEIKAAKAELERL 94 Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E +L D ND A++E+ AGAGG E+ +A L RMY+R+AE +++ E + + Sbjct: 95 EAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K + + G AYG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA + Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ +E +KR S G ++R+Y P V + R N+ ++ Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333 Query: 338 VLDGDLDDFM 347 V++GDLD + Sbjct: 334 VMEGDLDAIL 343 >gi|262199727|ref|YP_003270936.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365] gi|262083074|gb|ACY19043.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365] Length = 363 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 122/285 (42%), Positives = 174/285 (61%), Gaps = 17/285 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGT 128 + ELA EE LQE+ LEV+ + + LL + D ND LE+ AG GG Sbjct: 79 MRELAREE--LRALQES--------LEVKEQHIKILLLPK-DPNDGKNILLELRAGTGGD 127 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY R+AE++ +KTE + + DG G+K A +LI G + Y LK E GVH Sbjct: 128 EAALFAGDLYRMYMRYAERQGWKTEIMSMSDGAAGGMKEAVVLIAGKDVYSSLKYESGVH 187 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P ++ ++I++ E D RID YR+SG GGQ VNTTDS Sbjct: 188 RVQRVPATESQGRVHTSAATVVVMPEAEE-VDIKLEEKDLRIDVYRSSGPGGQSVNTTDS 246 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307 AVR+TH+PTG+VV CQ E+SQHKNKA+A +LR+++ ++E+ K+E S + G Sbjct: 247 AVRVTHLPTGIVVICQDEKSQHKNKAKAMRILRSRVLDVEIAKQEAEERDQRRSMVKSGD 306 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ + + S VLDGDL D + A A Sbjct: 307 RSEKIRTYNF-PQDRLTDHRINLTRHNLSSVLDGDLYDVVDALRA 350 >gi|15602420|ref|NP_245492.1| peptide chain release factor 1 [Pasteurella multocida subsp. multocida str. Pm70] gi|13431785|sp|P57852|RF1_PASMU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|12720821|gb|AAK02639.1| PrfA [Pasteurella multocida subsp. multocida str. Pm70] Length = 360 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 115/280 (41%), Positives = 174/280 (62%), Gaps = 12/280 (4%) Query: 80 DDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND---AYLEVHAGAGGTESQDWA 134 DD S+ + + ++ K E+E +Q + LL + D ND YLE+ AG GG E+ +A Sbjct: 70 DDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPK-DPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++K E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++E+ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P V D R N+ +V++G +D+ ++ + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|326423672|ref|NP_759262.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6] gi|32171537|sp|Q8DFF9|RF1_VIBVU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46576703|sp|Q7MMY6|RF1_VIBVY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|319999027|gb|AAO08789.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6] Length = 362 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 173/291 (59%), Gaps = 10/291 (3%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHA 123 ++L+ E +EDD + + + ++ K+ +E E +L D ND +LE+ A Sbjct: 60 EDLVAAEEMAKEDDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRA 119 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG E+ +A L RMY+++AEKR ++ E + ++ E G K + G AYG+LK Sbjct: 120 GAGGDEAGIFAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKF 179 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ + P + ++ EI SD +IDT+R+SGAGGQHV Sbjct: 180 ESGGHRVQRVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHV 239 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSA+RITH+PTG VV+CQ ERSQHKNKA+A +L A++ + E KR A + ++ + Sbjct: 240 NTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKR--AAEVSDTRR 297 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R N+ S+V++GDL + + Sbjct: 298 NLLGSGDRSDRIRTYNY-PQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVI 347 >gi|37679115|ref|NP_933724.1| peptide chain release factor 1 [Vibrio vulnificus YJ016] gi|320157139|ref|YP_004189518.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O] gi|37197857|dbj|BAC93695.1| protein chain release factor A [Vibrio vulnificus YJ016] gi|319932451|gb|ADV87315.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O] Length = 363 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 173/291 (59%), Gaps = 10/291 (3%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHA 123 ++L+ E +EDD + + + ++ K+ +E E +L D ND +LE+ A Sbjct: 61 EDLVAAEEMAKEDDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRA 120 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG E+ +A L RMY+++AEKR ++ E + ++ E G K + G AYG+LK Sbjct: 121 GAGGDEAGIFAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKF 180 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ + P + ++ EI SD +IDT+R+SGAGGQHV Sbjct: 181 ESGGHRVQRVPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHV 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSA+RITH+PTG VV+CQ ERSQHKNKA+A +L A++ + E KR A + ++ + Sbjct: 241 NTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKR--AAEVSDTRR 298 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R N+ S+V++GDL + + Sbjct: 299 NLLGSGDRSDRIRTYNY-PQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVI 348 >gi|237744127|ref|ZP_04574608.1| peptide chain release factor 1 [Fusobacterium sp. 7_1] gi|256027764|ref|ZP_05441598.1| peptide chain release factor 1 [Fusobacterium sp. D11] gi|289765720|ref|ZP_06525098.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11] gi|229431356|gb|EEO41568.1| peptide chain release factor 1 [Fusobacterium sp. 7_1] gi|289717275|gb|EFD81287.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11] Length = 357 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 106/244 (43%), Positives = 150/244 (61%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A L RMY+R+AE++K+K E +E DGE GIK I Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDT Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + ++G G +IR+Y P + D R + LDGD+D+ + A Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342 Query: 350 TLAI 353 + Sbjct: 343 LITF 346 >gi|221632126|ref|YP_002521347.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159] gi|221155596|gb|ACM04723.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159] Length = 363 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 124/341 (36%), Positives = 192/341 (56%), Gaps = 12/341 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QR + + DP + + L RER L+ ++ ++++D + + E LE + Sbjct: 17 QRFDEVERQLADPDVATDPQRVAQLARERAELEEIVALYRQLKD-IDRQVAQAEELLEAE 75 Query: 81 DCSILQETSDNLQRIK--LEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136 D +++ ++ + R++ E Y++ L D D +E+ AG GG E+ +A Sbjct: 76 DPDLVELAAEEIDRLREYRETIYQELRRRLVPRDPNDEKDVIVEIRAGTGGEEAALFAAD 135 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMYTR+AE++ +K E L E G K ++G AY K E GVHR+ R+ Sbjct: 136 LFRMYTRYAERQGWKVEVLSSSPTELGGFKEIIFEVRGKGAYSHFKHESGVHRVQRVPIT 195 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S+ R HTS +++ V P D+ +E+ I E D RI+ +R+SG GGQ VNTTDSAVRITH+P Sbjct: 196 ESSGRIHTSTATVAVLPEADE-VEVHIDEDDLRIEVFRSSGHGGQSVNTTDSAVRITHLP 254 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV CQ ERSQ KN+ +A +LRA+LYEL+ +K EE G + ++G G +IR Sbjct: 255 TGIVVSCQDERSQLKNRLKAMAVLRARLYELQRRKLEE-ERTG-LRRQQVGTGERAEKIR 312 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +Y P V D R + + VLDG++D F++ A++ Sbjct: 313 TYNF-PQDRVTDHRLKLTVNNLPAVLDGEIDIFIQELQALE 352 >gi|222529063|ref|YP_002572945.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM 6725] gi|312622681|ref|YP_004024294.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis 2002] gi|254790859|sp|B9MR68|RF1_ANATD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|222455910|gb|ACM60172.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM 6725] gi|312203148|gb|ADQ46475.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis 2002] Length = 355 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 126/337 (37%), Positives = 190/337 (56%), Gaps = 17/337 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81 L K DP + E + LM+E +L + +E + R+ D + LL+ L+ED Sbjct: 15 LEKKISDPEIISQPQEWQKLMKEHSNLQPIVEKFREYK-RILDTIKEAEELLDTDLDEDF 73 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140 +++E + + K VE + LL + D + +E+ AGAGG E+ +A L RM Sbjct: 74 EKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRM 133 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y+R+AE++ +K E + + + G K +I G AY LK E GVHR+ R+ +S Sbjct: 134 YSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGG 193 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P V+D +E+EI E D IDT+RA GAGGQHVN T+SAVRI H PTG+V Sbjct: 194 RIHTSTATVAVLPEVED-VEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGIV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSY 315 V CQ ERSQH N+ +A +LRA+LY+ +Q++E I ++++G G +IR+Y Sbjct: 253 VTCQDERSQHANRDRAMKILRARLYDYYQSIQQKE----IESQRRSQVGTGDRSERIRTY 308 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + +LDG+LD+ + A + Sbjct: 309 NF-PQGRVTDHRIGLTLYKLEQILDGELDEIIDALIT 344 >gi|169333846|ref|ZP_02861039.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM 17244] gi|169259411|gb|EDS73377.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM 17244] Length = 355 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 132/343 (38%), Positives = 199/343 (58%), Gaps = 19/343 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLELAL 77 +R + ++ +P + N L++E HL+ + K ++ ++L N +L + Sbjct: 10 KRFNEVSEDISNPDIINNHELYTELIKEHSHLEPIVIAYKKYADVMEQLESNKEMLNDSD 69 Query: 78 EEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQD 132 ++D ++ E +S N Q+ LE E K +L D ND +E+ AG GG E+ Sbjct: 70 DDDFKEMILEDISSLNEQKEGLEQEIK----ILLIPKDPNDDKNVIVEIRAGVGGDEAAL 125 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMYTR+AE+ ++K E L ++ G K A I+G AY LK E G HR+ R Sbjct: 126 FAGDLLRMYTRYAERNRWKVEMLSTNEIGIGGYKEAVFSIQGKGAYSRLKYESGTHRVQR 185 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I +S+ R HTS ++ V P +D +E+ I +D RID YR+SG GGQ VNTTDSAVRI Sbjct: 186 IPDTESSGRIHTSAITVAVLPEAED-VEVNIDPNDLRIDVYRSSGNGGQSVNTTDSAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV CQ E+SQ KNK +A +L+A+L+E+E +K++E I + K++IG G Sbjct: 245 THIPSGLVVACQDEKSQLKNKDKALKILKARLFEIEQRKQQEA--IASNRKSQIGSGDRS 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R + +DVLDGD+D+F+ + Sbjct: 303 ERIRTYNF-PQGRVTDHRVGLTLYKLNDVLDGDIDEFIDTLIV 344 >gi|262166266|ref|ZP_06034003.1| peptide chain release factor 1 [Vibrio mimicus VM223] gi|262025982|gb|EEY44650.1| peptide chain release factor 1 [Vibrio mimicus VM223] Length = 362 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 121/327 (37%), Positives = 187/327 (57%), Gaps = 11/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + ++L+ E +EDD + + D Sbjct: 25 DPAVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+R+AEK Sbjct: 84 IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + + E G K + G AYG LK E G HR+ R+ ++ R HTS Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P V ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER Sbjct: 204 TVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A ++L A++ + E KR A I ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ ++V++GD+ ++ + Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIEPVI 347 >gi|307719604|ref|YP_003875136.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192] gi|306533329|gb|ADN02863.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192] Length = 357 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 125/340 (36%), Positives = 192/340 (56%), Gaps = 17/340 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELA 76 + R L DP ++ + + L +E HL + +E ++ RL + +LE Sbjct: 11 ITRFKELEEALADPSIFNDQKRYRELAQEHAHLSQVVRTAEEYRRLEARLEEAKTVLE-- 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132 EEDD + + + ++ ++ ++ + ++ + LL D + LE+ AG GG E+ Sbjct: 69 -EEDDHELKEMAREEIKALEDQILHTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEEAAL 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE++ +K E +E + E G + I G YG L+ E G HR+ R Sbjct: 128 FAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I +S R HTS ++ V P +++ E+EI D R+D +R+SG GGQ VNTTDSAVRI Sbjct: 188 IPVTESGGRIHTSAVTVAVLPEPEET-EVEIRPEDIRVDVFRSSGPGGQSVNTTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV CQ E+SQHKNKA+A +LRA+LYE+E Q++E + +++IG G Sbjct: 247 THLPTGLVVTCQDEKSQHKNKAKALKILRARLYEMEKQRQE--SERAAMRRSQIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R N+ V+DGDLD+ + A Sbjct: 305 ERIRTYNF-PQNRVTDHRINLTLYKLEAVMDGDLDEIIDA 343 >gi|325847800|ref|ZP_08170022.1| peptide chain release factor 1 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480818|gb|EGC83871.1| peptide chain release factor 1 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 357 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 125/335 (37%), Positives = 195/335 (58%), Gaps = 13/335 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELALEEDDC 82 L K DP + + + K + RE L + EI +D + +N LL+ A +++ Sbjct: 15 LEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEENTELLKEAEDKEMI 74 Query: 83 SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 +L+ D ++ LE + + LL D D +E+ AGAGG E+ +A L RM Sbjct: 75 DLLKAEIDENKK-NLEKYNEDLKILLIPQDPNDHKDVIVEIRAGAGGEEAGLFAGNLYRM 133 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y +A+K+ +KTE +++ G+K AT +++G AY LK E GVHR+ R+ +S Sbjct: 134 YHMYADKQNYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGVHRVQRVPETESGG 193 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P D+ ++I+I +D R D YR+SG GGQ VNTTDSAVR+THIPTG+V Sbjct: 194 RIHTSTATVAVLPEADE-VDIKIDPNDIRTDVYRSSGNGGQSVNTTDSAVRLTHIPTGLV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ E+SQ KNK +A +LRA+LYE+E +KR++ I ++ K+++G G +IR+Y Sbjct: 253 VTCQDEKSQIKNKDKAMRVLRARLYEMEEEKRQK--EISDNRKSQVGTGDRSERIRTYNY 310 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P + D R N D LDG++++ + + + Sbjct: 311 -PQGRITDHRINKTIYQLDDFLDGNIEEMIDSLIT 344 >gi|222100202|ref|YP_002534770.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359] gi|221572592|gb|ACM23404.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359] Length = 349 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 108/244 (44%), Positives = 157/244 (64%), Gaps = 8/244 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 LLS E + A +E+ G GG E+ +A L RMYTR+AE++ + E E+H+ + G+K Sbjct: 86 LLSPET-GDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWDVEIAEMHETDLGGVK 144 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A +KG NAY LK E GVHR+ R+ +S R HTS +++ V P +++ +IEI Sbjct: 145 EAVFFVKGKNAYSILKYESGVHRVQRVPITESGGRIHTSTATVVVLPEIEER-DIEIRPE 203 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +I+T+RASG GGQ+VN T+SAVRITHIPTG+VV CQ ERSQ++NK A +LRA+LY+ Sbjct: 204 DLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQNKQTALRILRARLYQ 263 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L+ ++ E+ + + K++IG G +IR+Y P V D R N ++LDGDL Sbjct: 264 LQREQLEK--ELSQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRLQEILDGDL 320 Query: 344 DDFM 347 D+ + Sbjct: 321 DEII 324 >gi|258544629|ref|ZP_05704863.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826] gi|258520137|gb|EEV88996.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826] Length = 360 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 107/238 (44%), Positives = 149/238 (62%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D YLE+ AG GG E+ +A L RMY ++AE++ +K E L + GE G K I Sbjct: 107 DGADIYLEIRAGTGGDEAAIFAGDLFRMYGKYAEQKNWKIEILSENPGEHGGYKEIISQI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y LK E G HR+ R+ +S R HTS +++ + PV DD IEI+ +D ++DT Sbjct: 167 SGNNVYSTLKYESGAHRVQRVPETESGGRIHTSAATVAILPVGDDIQPIEINPADLKVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A +L A+L ++E K Sbjct: 227 YRASGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRAKAMRLLAARLLDVERTKA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + K+ +G G +IR+Y P V D R N+ S +D+L+G LD + Sbjct: 287 QN--EQAAERKSLVGSGDRSERIRTYNY-PQSRVTDHRINLTLYSLADILEGGLDAII 341 >gi|325474790|gb|EGC77976.1| peptide chain release factor 1 [Treponema denticola F0402] Length = 361 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 131/350 (37%), Positives = 194/350 (55%), Gaps = 29/350 (8%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCD 68 DN +RL + + E+P+L ++V + K MRE +L DN +S K+I+D Sbjct: 5 LDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIEDSKL- 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL------SGEADSNDAYLEVH 122 L EE D + + + L LE +++ E+ L + + +E+ Sbjct: 64 ------LIQEESDAELKEMAREELH--SLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIR 115 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+ +A L RMYT +AE + +K E L +++ E G K T I G YG L+ Sbjct: 116 GGTGGDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLR 175 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ + + R HTS ++ V P +++ EIEI++ D RID RA G GGQ Sbjct: 176 YESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEET-EIEINQEDLRIDVMRAGGPGGQC 234 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ KNKA+A +LR++LY+LE K++ A ++ Sbjct: 235 VNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQ--AERAQNR 292 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K+++G G +IR+Y P V D R N+ V+ G LD+ + A Sbjct: 293 KSQVGSGDRSERIRTYNF-PQNRVTDHRINLTLYKLDSVMQGSLDELIDA 341 >gi|332993699|gb|AEF03754.1| peptide chain release factor 1 [Alteromonas sp. SN2] Length = 361 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 127/343 (37%), Positives = 194/343 (56%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N V+R + DP + N + + L +E L++ + Q + +NL Sbjct: 9 LENLVERFEEVQALLGDPQVIGNQDKFRNLSKEFSQLESVVGGFNAYQ-QAQENLDSANE 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQ 131 L+EDD + + + L+ K ++E + E +L D ND +LEV AGAGG E+ Sbjct: 68 MLKEDDAEMREMAQEELKIAKADIERLETELQVLLLPKDPNDDSNCFLEVRAGAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + ++ E + ++GE G K I G YG LK E G HR+ Sbjct: 128 IFAGDLFRMYSRYAETKGWRVELINANEGEHGGYKEVVANISGDGVYGILKFESGGHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P + +S I+I+ +D RIDT+RASGAGGQHVN TDSA+R Sbjct: 188 RVPDTESQGRIHTSACTVAVLPEIPESEAIDINPADLRIDTFRASGAGGQHVNKTDSAIR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+P+G+VV+CQ ERSQHKN+A+A ++L+A+L +E +KR + K+ +G G Sbjct: 248 ITHLPSGLVVECQDERSQHKNRAKAMSVLQARLNNIEEEKRAAEEA--STRKSLVGSGDR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ +V++GDL + + Sbjct: 306 SERIRTYNF-PQGRVTDHRINLTIYRLDEVIEGDLKQLLDPIM 347 >gi|319790214|ref|YP_004151847.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1] gi|317114716|gb|ADU97206.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1] Length = 365 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 112/244 (45%), Positives = 156/244 (63%), Gaps = 9/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGAGG E+ +A L RMY R+AE++ +K E L +++ GIK I Sbjct: 110 DEKNVILEIRAGAGGEEAALFAQDLFRMYCRYAERKGWKVEILSMNETGLGGIKEVVATI 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ RI +S R HTS +++ + P ++ +EIEI ESD +IDT Sbjct: 170 SGKGAYSRLKYESGVHRVQRIPVTESGGRIHTSTATVAILPEAEE-VEIEIKESDLKIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQK 291 YR+SGAGGQHVNTTDSAVRITH+PTG+VV C ERSQ +N+ +A +LRA+L EL E Q+ Sbjct: 229 YRSSGAGGQHVNTTDSAVRITHLPTGIVVTCSNERSQIQNRIKAMKILRARLKELYERQQ 288 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +E++ + + K ++G G +IR+Y P V D R + + + LDGDLD+ + Sbjct: 289 KEKMDS---ARKAQVGSGDRSEKIRTYNF-PEGRVTDHRIKLTLYNLQEFLDGDLDEMID 344 Query: 349 ATLA 352 A A Sbjct: 345 ALAA 348 >gi|167031789|ref|YP_001667020.1| peptide chain release factor 1 [Pseudomonas putida GB-1] gi|189039985|sp|B0KNE4|RF1_PSEPG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166858277|gb|ABY96684.1| peptide chain release factor 1 [Pseudomonas putida GB-1] Length = 360 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 116/285 (40%), Positives = 171/285 (60%), Gaps = 18/285 (6%) Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEA---------DSNDA---YLEVHAGAGGTES 130 ++L+++ +L+ + +E + E LL+ E+ D ND +LE+ AG GG E+ Sbjct: 67 ALLKDSDPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AEKR ++ E L ++GE G K ++G N YG LK E G HR+ Sbjct: 127 AIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P D+ IEI+ +D R+DTYRASGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++ + I K +G G Sbjct: 247 RITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA--IASERKLLVGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ S D+L G ++ ++ LA Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVEAVIEPLLA 348 >gi|237737785|ref|ZP_04568266.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817] gi|229419665|gb|EEO34712.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817] Length = 358 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 109/250 (43%), Positives = 149/250 (59%), Gaps = 6/250 (2%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L E D + +E+ GAGG E+ +A L RMY R+AE+RK+K E +E + GIK Sbjct: 100 LPKDENDDKNVIVEIRGGAGGDEAALFAGDLFRMYNRYAERRKWKVEIIEKQEIGIGGIK 159 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A I G AY LK E GVHR+ R+ +S R HTS +++ V P V+D E++I Sbjct: 160 EAVFSINGLGAYSRLKFESGVHRVQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPK 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +IDTYR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L +KLYE Sbjct: 220 DLKIDTYRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLVSKLYE 279 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +E +K+ + + K ++G G +IR+Y P + D R LDGD+ Sbjct: 280 MECEKQR--SQVESERKLQVGTGDRSEKIRTYNF-PQGRITDHRIKFTVYQLDAFLDGDI 336 Query: 344 DDFMKATLAI 353 D+ + A + Sbjct: 337 DEMIDALITF 346 >gi|153939567|ref|YP_001389502.1| peptide chain release factor 1 [Clostridium botulinum F str. Langeland] gi|168182252|ref|ZP_02616916.1| peptide chain release factor 1 [Clostridium botulinum Bf] gi|170755459|ref|YP_001779766.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra] gi|166223550|sp|A7G9P2|RF1_CLOBL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229576659|sp|B1IE21|RF1_CLOBK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|152935463|gb|ABS40961.1| peptide chain release factor 1 [Clostridium botulinum F str. Langeland] gi|169120671|gb|ACA44507.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra] gi|182674565|gb|EDT86526.1| peptide chain release factor 1 [Clostridium botulinum Bf] gi|295317603|gb|ADF97980.1| peptide chain release factor 1 [Clostridium botulinum F str. 230613] gi|322804409|emb|CBZ01959.1| peptide chain release factor 1 [Clostridium botulinum H04402 065] Length = 358 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 131/344 (38%), Positives = 201/344 (58%), Gaps = 18/344 (5%) Query: 20 VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 ++RL+F+ K E DP + N E + L +E L+ ++ +E + D Sbjct: 2 LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E+ EE D + + + ++ + L++E + E ++L D ND ++E+ AGAGG Sbjct: 62 KEMLKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGE 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ LLRMYTR+AE++ +K E + ++ + G K T+ IKG AY LK E GVH Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E +R E K+++G Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P + D R + LDGD+D+ ++A Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEA 341 >gi|300313560|ref|YP_003777652.1| peptide chain release factor 1 [Herbaspirillum seropedicae SmR1] gi|300076345|gb|ADJ65744.1| peptide chain release factor 1 (RF-1) protein [Herbaspirillum seropedicae SmR1] Length = 359 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 129/345 (37%), Positives = 188/345 (54%), Gaps = 11/345 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L D +RL LN+ ++ + + RE L ++ E D Sbjct: 6 LAKLDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRTA 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131 EL + D + QE D + +E + LL + D + +LE+ AG GG ES Sbjct: 66 QELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMYTR+AE+++++ E + + E G K I G AY LK E G HR+ Sbjct: 126 LFAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ V P D+ ++EI+ +D RIDTYRASGAGGQH+N TDSAVR Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL--QKREEIANIGESSKTEIGWG 309 ITH+PTG+VV+CQ +RSQHKNKAQA +L A++ +++L Q+ EE A + K+ IG G Sbjct: 246 ITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAA----TRKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D R N+ ++DGDLD+ A + Sbjct: 302 DRSERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLDELTNALI 345 >gi|261209906|ref|ZP_05924207.1| peptide chain release factor 1 [Vibrio sp. RC341] gi|260841092|gb|EEX67617.1| peptide chain release factor 1 [Vibrio sp. RC341] Length = 362 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 120/327 (36%), Positives = 187/327 (57%), Gaps = 11/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + ++L+ E +EDD + + D Sbjct: 25 DPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+R+AEK Sbjct: 84 IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + + E G K + G AYG LK E G HR+ R+ ++ R HTS Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A ++L A++ + E KR A I ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ ++V++GD+ ++ + Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIEPVI 347 >gi|258621065|ref|ZP_05716099.1| Peptide chain release factor 1 [Vibrio mimicus VM573] gi|258626137|ref|ZP_05720985.1| Peptide chain release factor 1 [Vibrio mimicus VM603] gi|262170842|ref|ZP_06038520.1| peptide chain release factor 1 [Vibrio mimicus MB-451] gi|258581492|gb|EEW06393.1| Peptide chain release factor 1 [Vibrio mimicus VM603] gi|258586453|gb|EEW11168.1| Peptide chain release factor 1 [Vibrio mimicus VM573] gi|261891918|gb|EEY37904.1| peptide chain release factor 1 [Vibrio mimicus MB-451] Length = 362 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 120/327 (36%), Positives = 187/327 (57%), Gaps = 11/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + ++L+ E +EDD + + D Sbjct: 25 DPAVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+R+AEK Sbjct: 84 IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + + E G K + G AYG LK E G HR+ R+ ++ R HTS Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A ++L A++ + E KR A I ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ ++V++GD+ ++ + Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIEPVI 347 >gi|153809900|ref|ZP_01962568.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174] gi|149834078|gb|EDM89158.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174] Length = 359 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 122/328 (37%), Positives = 192/328 (58%), Gaps = 11/328 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLILLELALEEDDCSIL-QE 87 +P + N + LM+E+ L + KE +D + D+L +LE +E+ +L +E Sbjct: 21 EPGVTDNQERFQKLMKEQSELQPIVDAYKEYKDNKETIQDSLSMLEEEKDEEMREMLKEE 80 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 SD +R++ + + L DS + +E+ AGAGG E+ +A + RMY ++AE Sbjct: 81 LSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGGDEAALFAAEIYRMYVKYAES 140 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R++KTE + +++ G K T +I+G AY LK E GVHR+ R+ +S R HTS Sbjct: 141 RRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGVHRVQRVPETESGGRIHTSTC 200 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ + P ++ I+ + +DC+ D +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+ Sbjct: 201 TVAIMPEAEE-IDFHLDMNDCKFDVFRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEK 259 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQ KNK +A +LR++LYE+EL K+ + E+ +++IG G +IR+Y P V Sbjct: 260 SQLKNKDKALKVLRSRLYEMELAKQHDAE--AEARRSQIGTGDRSEKIRTYNF-PQGRVT 316 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R + VL GDLD+ + + +A Sbjct: 317 DHRIKLTLHRLDAVLGGDLDEILDSLIA 344 >gi|312127875|ref|YP_003992749.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis 108] gi|311777894|gb|ADQ07380.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis 108] Length = 355 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 126/337 (37%), Positives = 190/337 (56%), Gaps = 17/337 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81 L K DP + E + LM+E +L + +E + R+ + + LL+ L+ED Sbjct: 15 LEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYK-RILNTIKEAEELLDTDLDEDF 73 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140 +++E + + K VE + LL + D + +E+ AGAGG E+ +A L RM Sbjct: 74 EKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRM 133 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y+R+AE++ +K E + + + G K +I G AY LK E GVHR+ R+ +S Sbjct: 134 YSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGG 193 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P V+D +E+EI E D IDT+RA GAGGQHVN T+SAVRI H PTG+V Sbjct: 194 RIHTSTATVAVLPEVED-VEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGIV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSY 315 V CQ ERSQH N+ +A +LRA+LY+ +Q++E I ++++G G +IR+Y Sbjct: 253 VTCQDERSQHANRDRAMKILRARLYDYYQSIQQKE----IESQRRSQVGTGDRSERIRTY 308 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + VLDG+LD+ + A + Sbjct: 309 NF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344 >gi|237793457|ref|YP_002861009.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657] gi|259585216|sp|C3KYH5|RF1_CLOB6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229260673|gb|ACQ51706.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657] Length = 358 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 131/344 (38%), Positives = 201/344 (58%), Gaps = 18/344 (5%) Query: 20 VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 ++RL+F+ K E DP + N E + L +E L+ ++ +E + D Sbjct: 2 LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E+ EE D + + + ++ + L++E + E ++L D ND ++E+ AGAGG Sbjct: 62 KEMLKEESDKDLREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGE 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ LLRMYTR+AE++ +K E + ++ + G K T+ IKG AY LK E GVH Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E +R E K+++G Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P + D R + LDGD+D+ ++A Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEA 341 >gi|86156794|ref|YP_463579.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans 2CP-C] gi|119361506|sp|Q2IMW2|RF1_ANADE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|85773305|gb|ABC80142.1| bacterial peptide chain release factor 1 (bRF-1) [Anaeromyxobacter dehalogenans 2CP-C] Length = 370 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 117/336 (34%), Positives = 195/336 (58%), Gaps = 12/336 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QR L DP + N + + +ER ++ ++ ++ + +L D++ E L + Sbjct: 15 QRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYR-KLLDDVAGNEALLGDK 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANM 136 D + + + L +++ +VE + + L D D +E+ AGAGG E+ +A Sbjct: 74 DPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGLFAAE 133 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 ++RMY R+AE+R ++ E ++ G G+K ATL + G Y LK E GVHR+ R+ Sbjct: 134 VMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQRVPAT 193 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P ++ I+++++ +D +D +R++G+GGQ VNTTDSAVR+TH P Sbjct: 194 EAQGRIHTSTVTVAVMPEAEE-IDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRLTHKP 252 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV+CQQE+SQ KN+ A MLRAKL+E+E Q+R+ A + K+++G G +IR Sbjct: 253 TGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIE-QERQRSARDA-TRKSQVGTGDRSEKIR 310 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +Y P + D R N + + V+DGD+ D + A Sbjct: 311 TYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDA 345 >gi|109898878|ref|YP_662133.1| peptide chain release factor 1 [Pseudoalteromonas atlantica T6c] gi|119361579|sp|Q15SQ9|RF1_PSEA6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|109701159|gb|ABG41079.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudoalteromonas atlantica T6c] Length = 362 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 105/239 (43%), Positives = 156/239 (65%), Gaps = 6/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D ++ ++E+ AGAGG E+ +A L RMY+R+AE R++K E + +++G+ G K I Sbjct: 109 DESNCFIEIRAGAGGDEAAIFAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P V +S IE++++D +IDT Sbjct: 169 IGDGAYGVLKFESGGHRVQRVPETESQGRIHTSACTVVVMPEVPESEAIEVNKADLKIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITH+P+G+VV+CQ ERSQHKN+A+A +L+++L +LE +KR Sbjct: 229 FRASGAGGQHVNKTDSAIRITHVPSGIVVECQDERSQHKNRAKAMAVLQSRLNKLEEEKR 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + A + + + G +IR+Y P V D R N+ DV+ GDLD ++ Sbjct: 289 Q--AEETSTRRNLVASGDRSERIRTYNF-PQGRVTDHRINLTLYRLDDVVAGDLDAVLE 344 >gi|260494288|ref|ZP_05814419.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33] gi|260198434|gb|EEW95950.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33] Length = 357 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 106/244 (43%), Positives = 150/244 (61%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A L RMY+R+AE++K+K E +E DGE GIK I Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDT Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + ++G G +IR+Y P + D R + LDGD+D+ + A Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342 Query: 350 TLAI 353 + Sbjct: 343 LITF 346 >gi|88861344|ref|ZP_01135974.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata D2] gi|88816610|gb|EAR26435.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata D2] Length = 361 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 114/282 (40%), Positives = 166/282 (58%), Gaps = 10/282 (3%) Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAG 124 +L+ E +++D + D + K ++E Q L D+N+ YLEV AG Sbjct: 61 DLVAAEEMFKDEDPDMRDMAQDEFKAAKAQLETLTDELQVLMLPKDPKDNNNVYLEVRAG 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG E+ +A L RMY R+AE +K+K E + ++GE G K I G YG LK E Sbjct: 121 TGGDEAAIFAGDLFRMYARFAETQKWKVEIVSANEGEHGGYKEVIANISGTGVYGKLKFE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS ++ V P + ++ IEI+ +D ++DT+RASGAGGQHVN Sbjct: 181 SGVHRVQRVPETESQGRVHTSACTVAVMPEIPEAEAIEINAADIKVDTFRASGAGGQHVN 240 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSA+RITHIPTGVVV+CQ ERSQHKN+A+A ++L ++L + E +KR A + Sbjct: 241 KTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSVLASRLQQAEDEKRH--AEEATQRRN 298 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +G G +IR+Y P + D R N+ ++++ GDL Sbjct: 299 LVGSGDRSERIRTYNY-PQGRITDHRINLTLYKLNEIVSGDL 339 >gi|42527989|ref|NP_973087.1| peptide chain release factor 1 [Treponema denticola ATCC 35405] gi|81570139|sp|Q73JU6|RF1_TREDE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|41819034|gb|AAS13006.1| peptide chain release factor 1 [Treponema denticola ATCC 35405] Length = 361 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 131/350 (37%), Positives = 194/350 (55%), Gaps = 29/350 (8%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCD 68 DN +RL + + E+P+L ++V + K MRE +L DN +S K+I+D Sbjct: 5 LDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIEDSKL- 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL------SGEADSNDAYLEVH 122 L EE D + + + L LE +++ E+ L + + +E+ Sbjct: 64 ------LIQEESDAELKEMAREELH--SLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIR 115 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+ +A L RMYT +AE + +K E L +++ E G K T I G YG L+ Sbjct: 116 GGTGGDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLR 175 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ + + R HTS ++ V P +++ EIEI++ D RID RA G GGQ Sbjct: 176 YESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEET-EIEINQEDLRIDVMRAGGPGGQC 234 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ KNKA+A +LR++LY+LE K++ A ++ Sbjct: 235 VNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQ--AERAQNR 292 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K+++G G +IR+Y P V D R N+ V+ G LD+ + A Sbjct: 293 KSQVGSGDRSERIRTYNF-PQNRVTDHRINLTLYKLDAVMQGSLDELIDA 341 >gi|152997601|ref|YP_001342436.1| peptide chain release factor 1 [Marinomonas sp. MWYL1] gi|189039978|sp|A6W1C2|RF1_MARMS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|150838525|gb|ABR72501.1| peptide chain release factor 1 [Marinomonas sp. MWYL1] Length = 362 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 107/238 (44%), Positives = 152/238 (63%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +LEV AG GG E+ ++ L RMY+R+AE +++K E + DGE G K I Sbjct: 109 DSRNVFLEVRAGTGGDEASIFSGDLFRMYSRYAETQRWKVEIVSASDGEHGGYKEVIARI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS ++ V P +D+ +I I++SD RIDT Sbjct: 169 VGEGAYSKLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEMDEVDDIIINKSDLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+R+THIPTGVVV+CQ+ERSQHKN+A+A ++L ++L EL+K Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAELEK- 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ K+ +G G +IR+Y P V D R N+ +++ G+LD + Sbjct: 288 -AASEQSETRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDEIVAGELDSLI 343 >gi|225575054|ref|ZP_03783664.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM 10507] gi|225037724|gb|EEG47970.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM 10507] Length = 357 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 127/330 (38%), Positives = 196/330 (59%), Gaps = 15/330 (4%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELALEEDDCSIL-QE 87 +P + N + LMRE+ L + KE Q + D++ +LE +E+ +L +E Sbjct: 21 EPGVADNQERFQKLMREQSELQPIVDTYKEYKENQQTIQDSVSMLEEESDEEMREMLKEE 80 Query: 88 TSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 SD +R+ +LE E K LL + DS + +E+ AGAGG E+ +A + RMY ++A Sbjct: 81 LSDAKRRVGELENELKIL--LLPKDPNDSKNVIVEIRAGAGGDEAALFAAEIYRMYVKYA 138 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E R++KTE L +++ G K T +I+G AY LK E GVHR+ R+ +S R HTS Sbjct: 139 ESRRWKTEMLSLNENGIGGFKEVTFMIQGQGAYSRLKYESGVHRVQRVPETESGGRIHTS 198 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ + P ++ I+ + +DC+ D +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ Sbjct: 199 TITVAIMPEAEE-IDFHLDLNDCKFDVFRASGNGGQCVNTTDSAVRLTHIPTGIVISCQD 257 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 E+SQ KNK +A +LR++LYE+ELQK+ + E+ ++++G G +IR+Y P Sbjct: 258 EKSQLKNKDKALKVLRSRLYEMELQKQHDAE--AEARRSQVGTGDRSEKIRTYNF-PQGR 314 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R + L+GDLD+ + + +A Sbjct: 315 VTDHRIKLTLHRLEGTLNGDLDEVIDSLIA 344 >gi|168177471|ref|ZP_02612135.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916] gi|226947362|ref|YP_002802453.1| peptide chain release factor 1 [Clostridium botulinum A2 str. Kyoto] gi|254790873|sp|C1FQ97|RF1_CLOBJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|182670538|gb|EDT82512.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916] gi|226843349|gb|ACO86015.1| peptide chain release factor 1 [Clostridium botulinum A2 str. Kyoto] Length = 358 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 131/344 (38%), Positives = 200/344 (58%), Gaps = 18/344 (5%) Query: 20 VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 ++RL+F+ K E DP + N E + L +E L+ ++ +E + D Sbjct: 2 LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E+ EE D + + + ++ + L +E + E ++L D ND ++E+ AGAGG Sbjct: 62 KEMLKEESDKELREMAQEEIKELTLRLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGE 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ LLRMYTR+AE++ +K E + ++ + G K T+ IKG AY LK E GVH Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E +R E K+++G Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P + D R + LDGD+D+ ++A Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEA 341 >gi|332140922|ref|YP_004426660.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep ecotype'] gi|332140929|ref|YP_004426667.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep ecotype'] gi|238693241|sp|B4RSV6|RF1_ALTMD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|327550944|gb|AEA97662.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550951|gb|AEA97669.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep ecotype'] Length = 361 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 124/339 (36%), Positives = 192/339 (56%), Gaps = 11/339 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V+R + DP + + + + L +E L++ ++ Q + +NL + L E Sbjct: 13 VERFEEVQALLGDPEVIGDQDKFRNLSKEFSQLEDVVAGFNAYQ-QAQENLASAQEMLNE 71 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWAN 135 DD + + + ++ K E+E + E L D N+ +LE+ AGAGG E+ +A Sbjct: 72 DDAEMREMAQEEMKEAKGEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAIFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE R ++ E + ++ E G K + G YG LK E G HR+ R+ Sbjct: 132 DLFRMYSRYAESRGWRVELVNANESEHGGYKEVVANVSGDGVYGVLKFESGGHRVQRVPE 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S IEI+ ++ RIDT+RASGAGGQHVN TDSA+RITH+ Sbjct: 192 TESQGRIHTSACTVAVLPEIPESEAIEINPAELRIDTFRASGAGGQHVNKTDSAIRITHL 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKN+A+A ++L+A+L ++E +KR + K+ +G G +I Sbjct: 252 PTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEA--STRKSLVGSGDRSERI 309 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++GDL + L Sbjct: 310 RTYNF-PQGRVTDHRINLTIYRLDEVVEGDLKQLVDPIL 347 >gi|254369840|ref|ZP_04985850.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica FSC022] gi|157122799|gb|EDO66928.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica FSC022] Length = 361 Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 121/313 (38%), Positives = 181/313 (57%), Gaps = 15/313 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEV 99 L +E HL+ + KE L D E+ L E D +++ + L+ KLE Sbjct: 38 LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96 Query: 100 EYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 E + F LL + D + +LE+ AG GG E+ ++ L +MY+++AE+R +K E + Sbjct: 97 ELQIF--LLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISAS 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K I G Y LK E G HR+ RI +S R HTS ++ V P D+ Sbjct: 155 EGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQRIPATESQGRIHTSACTVAVMPEADEV 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A + Sbjct: 215 EGIDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 ML++KL + E+ K+++ ++ K+ +G G +IR+Y P V D R N+ Sbjct: 275 MLKSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKL 331 Query: 336 SDVLDGDLDDFMK 348 +V++G LD ++ Sbjct: 332 DEVMEGSLDSIIQ 344 >gi|37525987|ref|NP_929331.1| peptide chain release factor 1 [Photorhabdus luminescens subsp. laumondii TTO1] gi|46576710|sp|Q7N586|RF1_PHOLL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|36785417|emb|CAE14363.1| Peptide chain release factor 1 (RF-1) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 360 Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 110/237 (46%), Positives = 150/237 (63%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY+R+AE R++K E + +DGE G K + Sbjct: 107 DERNCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWKVEVISANDGEHGGYKEIIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ EIS SD RIDT Sbjct: 167 SGEQVYGHLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEIPDAELPEISPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E++KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +E E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QE----AEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVIEGKLD 338 >gi|164688895|ref|ZP_02212923.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM 16795] gi|164602099|gb|EDQ95564.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM 16795] Length = 354 Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 110/243 (45%), Positives = 153/243 (62%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +A L RMY+R+AE+R++KTE L D G K + +I Sbjct: 106 DEKNVIVEIRGGAGGDEAALFAGDLFRMYSRYAERRRWKTELLSASDTGVGGYKEVSFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E GVHR+ RI +S R HTS +++ V P V+D +EIEI+ +D RID Sbjct: 166 KGKGAYSRLKYESGVHRVQRIPSTESGGRIHTSTATVAVLPEVED-VEIEINPNDLRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVRITH+PTG VV CQ E+SQ KNK +A +L+A+LY+ L ++ Sbjct: 225 FRASGNGGQCVNTTDSAVRITHLPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALAEQ 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +I ++++G G +IR+Y P V D R N+ LDGDLD+ + A Sbjct: 285 HD--DIAAERRSQVGTGDRSERIRTYNF-PQGRVSDHRINLTLYKLESFLDGDLDEMIDA 341 Query: 350 TLA 352 + Sbjct: 342 LIT 344 >gi|104780100|ref|YP_606598.1| peptide chain release factor 1 [Pseudomonas entomophila L48] gi|166223588|sp|Q1IEX1|RF1_PSEE4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|95109087|emb|CAK13784.1| peptide chain release factor 1 [Pseudomonas entomophila L48] Length = 360 Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 107/243 (44%), Positives = 152/243 (62%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ ++ L RMY+R+AEKR ++ E L ++GE G K + Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + YG LK E G HR+ R+ +S R HTS ++ V P D+ + IEI+ +D R+DT Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++ Sbjct: 229 YRASGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAA 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + I K +G G +IR+Y P V D R N+ S D+L G +D ++ Sbjct: 289 QNA--IASERKLLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYSLDDILAGGVDAVIEP 345 Query: 350 TLA 352 LA Sbjct: 346 LLA 348 >gi|187777270|ref|ZP_02993743.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC 15579] gi|187774198|gb|EDU38000.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC 15579] Length = 358 Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 130/344 (37%), Positives = 201/344 (58%), Gaps = 18/344 (5%) Query: 20 VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 ++RL+F+ K E DP + N E + L +E L+ ++ +E + D Sbjct: 2 LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E+ EE D + + + ++ + L++E + E ++L D ND ++E+ AGAGG Sbjct: 62 KEMLREESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGD 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ LLRMYTR+AE++ +K E + ++ + G K T+ +KG AY LK E GVH Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAVKGKGAYSRLKYESGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E +R E K+++G Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P + D R + LDGD+D+ ++A Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEA 341 >gi|163784022|ref|ZP_02178981.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1] gi|159880707|gb|EDP74252.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1] Length = 359 Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 114/258 (44%), Positives = 160/258 (62%), Gaps = 8/258 (3%) Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 Q+ KLE E Q + D + LE+ GAGG E+ +A L RMY R+AEK +K Sbjct: 90 QKEKLESEI-QIALIPKDPNDDKNVILEIRQGAGGDEAALFAAELFRMYQRYAEKNGWKV 148 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L +H+ E GIK LIKG AY LK E GVHR+ R+ +S+ R HTS +++ V Sbjct: 149 EILSLHENERGGIKEVIALIKGEGAYSKLKYESGVHRVQRVPETESSGRIHTSTATVAVL 208 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P ++ +++EI+ D +I+T RASGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ +N Sbjct: 209 PEAEE-VDVEINPDDLKIETMRASGAGGQHVNTTDSAVRITHIPTGIVVSCQDERSQLQN 267 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329 +A+A +LRA+L + + ++E I K+++G G +IR+Y P V D R Sbjct: 268 RAKAMQILRARLKDYYDRIQQE--KIKSERKSQVGTGDRSEKIRTYNF-PQNRVTDHRIG 324 Query: 330 IEKTSPSDVLDGDLDDFM 347 +++LDG+LD+ + Sbjct: 325 YTSHRINEILDGELDEII 342 >gi|331270451|ref|YP_004396943.1| peptide chain release factor 1 [Clostridium botulinum BKT015925] gi|329127001|gb|AEB76946.1| peptide chain release factor 1 [Clostridium botulinum BKT015925] Length = 357 Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 122/333 (36%), Positives = 195/333 (58%), Gaps = 11/333 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ K DP + N E + L +E L+ ++ +E ++ + + EL EE+D + Sbjct: 15 LSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELVANKELLSEENDRDMK 74 Query: 86 QETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141 + + ++ ++ + + E +L D ND ++E+ AGAGG E+ +A L RMY Sbjct: 75 EMIQEEIKTLEESIVSDEEELKILLLPKDPNDDKNVFIEIRAGAGGDEAALFAANLFRMY 134 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TR+AE+ +KTE + ++ + G K +++G +AY +K E GVHR+ R+ +S+ R Sbjct: 135 TRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESGVHRVQRVPDTESSGR 194 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P VDD ++I+I +D RID +RASG GGQ VNTTDSAVR+THIPTG+VV Sbjct: 195 IHTSTATVAVLPEVDD-VDIQIDPNDIRIDVFRASGHGGQCVNTTDSAVRMTHIPTGIVV 253 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 CQ E+SQ KNK +A +L+A+LY E + E A+I K+++G G +IR+Y Sbjct: 254 SCQDEKSQLKNKEKALKVLKARLY--EKAEAERAASISADRKSQVGTGDRSERIRTYNY- 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V + R + LDGD+++ + A + Sbjct: 311 PQGRVTEHRIGVTLYKLDAFLDGDMEEIIDALI 343 >gi|269121056|ref|YP_003309233.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386] gi|268614934|gb|ACZ09302.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386] Length = 359 Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 107/243 (44%), Positives = 153/243 (62%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A + RM++R+AE+ K+K E ++ +D G+K LI Sbjct: 106 DEKNVIMEIRAGAGGDEAALFAYDVFRMFSRYAERNKWKVEVIDRNDIGVGGLKEIVFLI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E GVHR+ R+ +S+ R HTS ++ V P +DD ++EI+ D ++DT Sbjct: 166 KGKGAYSKLKYESGVHRVQRVPDTESSGRIHTSTITVAVLPEIDDVSQVEINPGDLKVDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVNTTDSAVRITHIPTG+VV Q ERSQ KN+ +A +L +K+YE+E++ Sbjct: 226 YRASGAGGQHVNTTDSAVRITHIPTGIVVTSQDERSQLKNRERAMKVLASKIYEMEVE-- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + + ++G G +IR+Y P V D R + VLDGDL + + A Sbjct: 284 EQRKTVESERRLQVGSGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDQVLDGDLVELIDA 342 Query: 350 TLA 352 A Sbjct: 343 LTA 345 >gi|110833384|ref|YP_692243.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2] gi|119361504|sp|Q0VS77|RF1_ALCBS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110646495|emb|CAL15971.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2] Length = 361 Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 126/344 (36%), Positives = 187/344 (54%), Gaps = 13/344 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D R L DP + N + + L RE +D + ++ Q + D+ A Sbjct: 10 DKLADRFEELAGLLSDPDVISNQNQFRDLSREYAEIDPVVKCYRQYQQAVEDHGAAK--A 67 Query: 77 LEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +++D + + +E D +R++ Q L D + +LEV AG GG E+ Sbjct: 68 MQDDSDADMREMGAEEARDAQERMEALAAELQKLMLPKDPRDGANVFLEVRAGTGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++A++R +K E + +GE G K + G Y +K E G HR+ Sbjct: 128 IFAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ + +D +I+I D RIDTYR+SGAGGQHVNTTDSAVR Sbjct: 188 RVPATESQGRIHTSACTVAIMAEAEDLGDIKIRTEDLRIDTYRSSGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTGVVV+CQ ERSQHKNKA+A ++L AKLY + Q+ A K+ +G G Sbjct: 248 ITHLPTGVVVECQDERSQHKNKARAMSLLSAKLY--DAQQNAAHAEQAAERKSLVGSGDR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++++GDLD+ + A LA Sbjct: 306 SERIRTYNY-PQGRVTDHRINLTLYRLNEIVEGDLDEILGALLA 348 >gi|312877228|ref|ZP_07737197.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus 6A] gi|311796037|gb|EFR12397.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus 6A] Length = 355 Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 126/337 (37%), Positives = 191/337 (56%), Gaps = 17/337 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81 L K DP + E + LM+E +L + +E + R+ + + LL+ L+ED Sbjct: 15 LEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYK-RILNTIKEAEELLDTDLDEDF 73 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140 +++E ++ + K VE + LL + D + +E+ AGAGG E+ +A L RM Sbjct: 74 EKLVKEELNHAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRM 133 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y+R+AE++ +K E + + + G K +I G AY LK E GVHR+ R+ +S Sbjct: 134 YSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGG 193 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P V+D +E+EI E D IDT+RA GAGGQHVN T+SAVRI H PTG+V Sbjct: 194 RIHTSTATVAVLPEVED-VEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGIV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSY 315 V CQ ERSQH N+ +A +LRA+LY+ +Q++E I ++++G G +IR+Y Sbjct: 253 VTCQDERSQHANRDRAMKILRARLYDYYQSIQQKE----IESQRRSQVGTGDRSERIRTY 308 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + VLDG+LD+ + A + Sbjct: 309 NF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344 >gi|56460033|ref|YP_155314.1| protein chain release factor A [Idiomarina loihiensis L2TR] gi|61214579|sp|Q5QUZ8|RF1_IDILO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56179043|gb|AAV81765.1| Protein chain release factor A [Idiomarina loihiensis L2TR] Length = 364 Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 107/242 (44%), Positives = 151/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D YLE+ AGAGG E+ +A L RMY+R+AEK +K + DGE G K + Sbjct: 110 DDRSCYLEIRAGAGGDEASIFAGDLFRMYSRYAEKNGWKVNIVSASDGEHGGYKEIIAHM 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG +K E G HR+ R+ +S R HTS ++ V P + ++ +EI+ +D R+DT Sbjct: 170 SGDGVYGRMKFESGGHRVQRVPETESQGRIHTSACTVAVLPEIPEAEAVEINPADLRVDT 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSA+R+THIPTGVVV+CQ+ERSQHKN+A+A ++L+A++ LE +KR Sbjct: 230 YRASGAGGQHVNRTDSAIRLTHIPTGVVVECQEERSQHKNRAKAMSVLQARIQRLEDEKR 289 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ +VL GD+D + A Sbjct: 290 Q--AEEDSTRRNLVGSGDRSERIRTYNY-PQSRVTDHRINLTLYRLDEVLTGDIDLILDA 346 Query: 350 TL 351 + Sbjct: 347 II 348 >gi|254302818|ref|ZP_04970176.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323010|gb|EDK88260.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 357 Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 105/244 (43%), Positives = 149/244 (61%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +A L RMY+R+AE++K+K E +E DGE GIK I Sbjct: 106 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDT Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + ++G G +IR+Y P + D R + LDGD+D+ + A Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342 Query: 350 TLAI 353 + Sbjct: 343 LITF 346 >gi|262404524|ref|ZP_06081079.1| peptide chain release factor 1 [Vibrio sp. RC586] gi|262349556|gb|EEY98694.1| peptide chain release factor 1 [Vibrio sp. RC586] Length = 362 Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 120/327 (36%), Positives = 187/327 (57%), Gaps = 11/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + ++L+ E +EDD + + D Sbjct: 25 DPAVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+R+AEK Sbjct: 84 IKAAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + + E G K + G AYG LK E G HR+ R+ ++ R HTS Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A ++L A++ + E KR A I ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ ++V++GD+ ++ + Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIEPVI 347 >gi|160947003|ref|ZP_02094206.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270] gi|158447387|gb|EDP24382.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270] Length = 365 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 130/349 (37%), Positives = 204/349 (58%), Gaps = 14/349 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68 LFD + V++ L K DP + +++ + L +E + + +E + L + Sbjct: 10 LFDKLELLVEKFEELEKKIIDPEIMKDMNVWQKLAKEHGDMKPIVEKYREYSKHKKELEE 69 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 N +L+ +L+++ +++E L+ +E E + + LL D + ++EV AG G Sbjct: 70 NKEMLKESLDDEMKELVKEEISELED-SIEKEEQDLKILLLPKDPNDEKNVFMEVRAGTG 128 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LLRMY +A+K+K+KTE + I + GIK L+KG AY LK E G Sbjct: 129 GDEAGLFAEDLLRMYRMFADKQKWKTEIMSISEQGVGGIKEVVFLVKGHGAYSKLKYESG 188 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S+ R HTS +++ V P V+D +++ I+++D RID YRASG GGQ VNTT Sbjct: 189 VHRVQRVPATESSGRIHTSAATVAVLPEVED-VDVVINQNDLRIDVYRASGNGGQCVNTT 247 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTGVVV CQ E+SQ KNK +A +L+++LY E + E+ +I ++ K++I Sbjct: 248 DSAVRITHIPTGVVVTCQDEKSQLKNKEKAMKILKSRLY--EKYQEEQNKDIADARKSQI 305 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G G +IR+Y P V D R N+ L+GD+ + + A + Sbjct: 306 GSGDRSERIRTYNF-PQGRVTDHRINMTIYQLDSFLNGDISEMIDALIT 353 >gi|254491165|ref|ZP_05104346.1| peptide chain release factor 1 [Methylophaga thiooxidans DMS010] gi|224463678|gb|EEF79946.1| peptide chain release factor 1 [Methylophaga thiooxydans DMS010] Length = 362 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 112/284 (39%), Positives = 174/284 (61%), Gaps = 10/284 (3%) Query: 75 LALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTES 130 L LEEDD + + + L Q + + E + L D ND +LE+ AG GG E+ Sbjct: 67 LMLEEDDAEMREMAREELNQAEQTQEELELSLQKLLLPKDPNDQRNIFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+++AE R++K E + +GE G K I G AY LK E G HR+ Sbjct: 127 AIFSGDLFRMYSKYAEVRRWKVEVINAQEGEHGGYKEMICRIVGEGAYSRLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ + P VD+ ++I+ +D R+DT+RASGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRIHTSACTVAILPEVDEIDAVDINPADIRVDTFRASGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV+CQ+ERSQHKN+A+A ++L++++ ++QK+E A E+ K+ +G G Sbjct: 247 RITHLPTGIVVECQEERSQHKNRAKAMSVLQSRIMAEQVQKQE--AEQAETRKSLVGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D R N+ +++++GDLD ++ + Sbjct: 305 RSERIRTYNY-PQGRITDHRINLTLYKLNEIVEGDLDQVIEPLI 347 >gi|198284467|ref|YP_002220788.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665453|ref|YP_002427134.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248988|gb|ACH84581.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517666|gb|ACK78252.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 365 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 106/239 (44%), Positives = 147/239 (61%), Gaps = 6/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LE+ AG GG E+ +A +L RMYTR+AE + F L D E G K L I Sbjct: 112 DDRSVFLEIRAGTGGEEAALFAGVLARMYTRYAESKGFGVVILSASDSERGGYKEVVLEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P VD EI I+ +D RIDT Sbjct: 172 SGRGAYSCLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDTVSEITINPADLRIDT 231 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSA+RITH+P+G+VV CQ++RSQHKN+A+A +L+A+L E E +K+ Sbjct: 232 YRASGAGGQHINKTDSAIRITHVPSGMVVTCQEDRSQHKNRARAMALLQARLLEQEQEKQ 291 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + A ++ + +G G +IR+Y P + D R N+ VL+GDLD ++ Sbjct: 292 QSAA--AQTRRLLVGSGDRSERIRTYNF-PQGRITDHRINLTLYRLEAVLEGDLDAVIE 347 >gi|15642178|ref|NP_231810.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147674456|ref|YP_001217695.1| peptide chain release factor 1 [Vibrio cholerae O395] gi|153213234|ref|ZP_01948646.1| peptide chain release factor 1 [Vibrio cholerae 1587] gi|153801649|ref|ZP_01956235.1| peptide chain release factor 1 [Vibrio cholerae MZO-3] gi|153818801|ref|ZP_01971468.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457] gi|153823572|ref|ZP_01976239.1| peptide chain release factor 1 [Vibrio cholerae B33] gi|153825583|ref|ZP_01978250.1| peptide chain release factor 1 [Vibrio cholerae MZO-2] gi|153828626|ref|ZP_01981293.1| peptide chain release factor 1 [Vibrio cholerae 623-39] gi|227082304|ref|YP_002810855.1| peptide chain release factor 1 [Vibrio cholerae M66-2] gi|229507743|ref|ZP_04397248.1| peptide chain release factor 1 [Vibrio cholerae BX 330286] gi|229512021|ref|ZP_04401500.1| peptide chain release factor 1 [Vibrio cholerae B33] gi|229513825|ref|ZP_04403287.1| peptide chain release factor 1 [Vibrio cholerae TMA 21] gi|229519157|ref|ZP_04408600.1| peptide chain release factor 1 [Vibrio cholerae RC9] gi|229522130|ref|ZP_04411547.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80] gi|229524175|ref|ZP_04413580.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426] gi|229528814|ref|ZP_04418204.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)] gi|229607288|ref|YP_002877936.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236] gi|254291410|ref|ZP_04962203.1| peptide chain release factor 1 [Vibrio cholerae AM-19226] gi|254849258|ref|ZP_05238608.1| peptide chain release factor 1 [Vibrio cholerae MO10] gi|255745092|ref|ZP_05419041.1| peptide chain release factor 1 [Vibrio cholera CIRS 101] gi|262167528|ref|ZP_06035234.1| peptide chain release factor 1 [Vibrio cholerae RC27] gi|20139356|sp|Q9KQ25|RF1_VIBCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|172047628|sp|A5F696|RF1_VIBC3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790906|sp|C3LPI4|RF1_VIBCM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|9656733|gb|AAF95324.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|124116034|gb|EAY34854.1| peptide chain release factor 1 [Vibrio cholerae 1587] gi|124122826|gb|EAY41569.1| peptide chain release factor 1 [Vibrio cholerae MZO-3] gi|126510644|gb|EAZ73238.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457] gi|126518907|gb|EAZ76130.1| peptide chain release factor 1 [Vibrio cholerae B33] gi|146316339|gb|ABQ20878.1| peptide chain release factor 1 [Vibrio cholerae O395] gi|148875897|gb|EDL74032.1| peptide chain release factor 1 [Vibrio cholerae 623-39] gi|149740734|gb|EDM54833.1| peptide chain release factor 1 [Vibrio cholerae MZO-2] gi|150422740|gb|EDN14694.1| peptide chain release factor 1 [Vibrio cholerae AM-19226] gi|227010192|gb|ACP06404.1| peptide chain release factor 1 [Vibrio cholerae M66-2] gi|227014075|gb|ACP10285.1| peptide chain release factor 1 [Vibrio cholerae O395] gi|229332588|gb|EEN98074.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)] gi|229337756|gb|EEO02773.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426] gi|229341055|gb|EEO06060.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80] gi|229343846|gb|EEO08821.1| peptide chain release factor 1 [Vibrio cholerae RC9] gi|229349006|gb|EEO13963.1| peptide chain release factor 1 [Vibrio cholerae TMA 21] gi|229351986|gb|EEO16927.1| peptide chain release factor 1 [Vibrio cholerae B33] gi|229355248|gb|EEO20169.1| peptide chain release factor 1 [Vibrio cholerae BX 330286] gi|229369943|gb|ACQ60366.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236] gi|254844963|gb|EET23377.1| peptide chain release factor 1 [Vibrio cholerae MO10] gi|255736922|gb|EET92318.1| peptide chain release factor 1 [Vibrio cholera CIRS 101] gi|262024100|gb|EEY42795.1| peptide chain release factor 1 [Vibrio cholerae RC27] gi|327484701|gb|AEA79108.1| Peptide chain release factor 1 [Vibrio cholerae LMA3894-4] Length = 362 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 120/327 (36%), Positives = 186/327 (56%), Gaps = 11/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + ++L+ E +EDD + + D Sbjct: 25 DPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+R+AEK Sbjct: 84 IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + + E G K + G AYG LK E G HR+ R+ ++ R HTS Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A ++L A++ + E KR A I ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ ++V++GD+ + + Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIDPVI 347 >gi|312793258|ref|YP_004026181.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180398|gb|ADQ40568.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 355 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 126/337 (37%), Positives = 190/337 (56%), Gaps = 17/337 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81 L K DP + E + LM+E +L + +E + R+ + + LL+ L+ED Sbjct: 15 LEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYK-RILNTIKEAEELLDTDLDEDF 73 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140 +++E + + K VE + LL + D + +E+ AGAGG E+ +A L RM Sbjct: 74 EKLVKEELNQAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFRM 133 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y+R+AE++ +K E + + + G K +I G AY LK E GVHR+ R+ +S Sbjct: 134 YSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESGG 193 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P V+D +E+EI E D IDT+RA GAGGQHVN T+SAVRI H PTG+V Sbjct: 194 RIHTSTATVAVLPEVED-VEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGIV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRSY 315 V CQ ERSQH N+ +A +LRA+LY+ +Q++E I ++++G G +IR+Y Sbjct: 253 VTCQDERSQHANRDRAMKILRARLYDYYQSIQQKE----IESQRRSQVGTGDRSERIRTY 308 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + VLDG+LD+ + A + Sbjct: 309 NF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344 >gi|187931103|ref|YP_001891087.1| peptide chain release factor 1 [Francisella tularensis subsp. mediasiatica FSC147] gi|238691540|sp|B2SFF6|RF1_FRATM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|187712012|gb|ACD30309.1| peptide chain release factor 1 [Francisella tularensis subsp. mediasiatica FSC147] Length = 361 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 120/316 (37%), Positives = 182/316 (57%), Gaps = 15/316 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEV 99 L +E HL+ + KE L D E+ L E D +++ + L+ KLE Sbjct: 38 LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96 Query: 100 EYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 E + F LL + D + +LE+ AG GG E+ ++ L +MY+++AE+R +K E + Sbjct: 97 ELQIF--LLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISAS 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 155 EGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEV 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A + Sbjct: 215 EGIDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 ML++KL + E+ K+++ ++ K+ +G G +IR+Y P V D R N+ Sbjct: 275 MLKSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKL 331 Query: 336 SDVLDGDLDDFMKATL 351 +V++G LD ++ + Sbjct: 332 DEVMEGSLDSIIQPLI 347 >gi|330828702|ref|YP_004391654.1| peptide chain release factor 1 [Aeromonas veronii B565] gi|328803838|gb|AEB49037.1| Peptide chain release factor 1 [Aeromonas veronii B565] Length = 362 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 121/309 (39%), Positives = 181/309 (58%), Gaps = 11/309 (3%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L RE L++ + + + + D+L ++ LEEDD + + + L K +E Sbjct: 36 RALTREYAQLEDIVHAFQRYR-QAQDDLETTQMMLEEDDADLREMAQEELPLAKANLEAL 94 Query: 103 QFESLLSGEA----DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E L D N+ YLE+ AGAGG E+ +A L RMY+R+AE++ ++ + + Sbjct: 95 EQELQLMLLPKDPKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRFAERQGWRVSIVSCN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 DGE G K I G YG LK E G HR+ R+ +S R HTS ++ V P V ++ Sbjct: 155 DGEYGGYKEVIAKIDGERVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 +IEI+ SD +IDT+RASGAGGQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+A+A + Sbjct: 215 EQIEINPSDLKIDTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 +L A+L E ++ A + + +G G +IR+Y P + + R N+ Sbjct: 275 VLSARLQAAEDERHR--AAEQSTRRNLVGSGDRSERIRTYNY-PQGRLSEHRINLTLYRL 331 Query: 336 SDVLDGDLD 344 S++L+GDLD Sbjct: 332 SEILEGDLD 340 >gi|227355360|ref|ZP_03839761.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906] gi|227164584|gb|EEI49455.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906] Length = 360 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 110/244 (45%), Positives = 155/244 (63%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DEFNCFLEIRAGTGGDEAALFAGDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P V ++ EIS SD RIDT Sbjct: 167 IGDGAYGVLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKR 286 Query: 293 EEIANIGESSKTE--IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +E E+S+ +G G +IR+Y P V D R N+ +V++G LD + Sbjct: 287 QE----AEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALI 341 Query: 348 KATL 351 + + Sbjct: 342 QPIV 345 >gi|197284958|ref|YP_002150830.1| peptide chain release factor 1 [Proteus mirabilis HI4320] gi|238693176|sp|B4EVR7|RF1_PROMH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194682445|emb|CAR42344.1| peptide chain release factor 1 [Proteus mirabilis HI4320] Length = 360 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 110/244 (45%), Positives = 155/244 (63%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DEFNCFLEIRAGTGGDEAALFAGDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P V ++ EIS SD RIDT Sbjct: 167 IGDGAYGVLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKR 286 Query: 293 EEIANIGESSKTE--IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +E E+S+ +G G +IR+Y P V D R N+ +V++G LD + Sbjct: 287 QE----AEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALI 341 Query: 348 KATL 351 + + Sbjct: 342 QPIV 345 >gi|297582072|ref|ZP_06943991.1| peptide chain release factor 1 [Vibrio cholerae RC385] gi|297533767|gb|EFH72609.1| peptide chain release factor 1 [Vibrio cholerae RC385] Length = 362 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 120/327 (36%), Positives = 186/327 (56%), Gaps = 11/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + ++L+ E +EDD + + D Sbjct: 25 DPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+R+AEK Sbjct: 84 IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + + E G K + G AYG LK E G HR+ R+ ++ R HTS Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A ++L A++ + E KR A I ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ ++V++GD+ + + Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLVDPVI 347 >gi|296327945|ref|ZP_06870480.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154901|gb|EFG95683.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 365 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 105/244 (43%), Positives = 149/244 (61%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +A L RMY+R+AE++K+K E +E DGE GIK I Sbjct: 114 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTI 173 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDT Sbjct: 174 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDT 233 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 234 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 293 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + ++G G +IR+Y P + D R + LDGD+D+ + A Sbjct: 294 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 350 Query: 350 TLAI 353 + Sbjct: 351 LITF 354 >gi|89256990|ref|YP_514352.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica LVS] gi|115315350|ref|YP_764073.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica OSU18] gi|134301375|ref|YP_001121343.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis WY96-3418] gi|156503190|ref|YP_001429255.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009371|ref|ZP_02274302.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica FSC200] gi|254368245|ref|ZP_04984265.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica 257] gi|290954490|ref|ZP_06559111.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica URFT1] gi|295312095|ref|ZP_06802908.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica URFT1] gi|119361542|sp|Q2A1Q0|RF1_FRATH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361543|sp|Q0BKE8|RF1_FRATO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223558|sp|A7NE96|RF1_FRATF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223560|sp|A4IWC1|RF1_FRATW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|89144821|emb|CAJ80160.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica LVS] gi|115130249|gb|ABI83436.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica OSU18] gi|134049152|gb|ABO46223.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis WY96-3418] gi|134254055|gb|EBA53149.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica 257] gi|156253793|gb|ABU62299.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica FTNF002-00] Length = 361 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 120/313 (38%), Positives = 181/313 (57%), Gaps = 15/313 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEV 99 L +E HL+ + KE L D E+ L E D +++ + L+ KLE Sbjct: 38 LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96 Query: 100 EYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 E + F LL + D + +LE+ AG GG E+ ++ L +MY+++AE+R +K E + Sbjct: 97 ELQIF--LLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISAS 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 155 EGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEV 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A + Sbjct: 215 EGIDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 ML++KL + E+ K+++ ++ K+ +G G +IR+Y P V D R N+ Sbjct: 275 MLKSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKL 331 Query: 336 SDVLDGDLDDFMK 348 +V++G LD ++ Sbjct: 332 DEVMEGSLDSIIQ 344 >gi|330502033|ref|YP_004378902.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01] gi|328916319|gb|AEB57150.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01] Length = 360 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 109/246 (44%), Positives = 153/246 (62%), Gaps = 12/246 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ ++ L RMY+R+AEK+ ++ E L ++GE G K + Sbjct: 109 DGRNVYLEIRAGTGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ +D R+DT Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSA+RITHIPTG VV+CQ+ERSQHKN+A+A L AK LQ + Sbjct: 229 YRSSGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAK-----LQDQ 283 Query: 293 EEIA---NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ A I E+ K +G G +IR+Y P V D R N+ S ++V+ G ++ Sbjct: 284 QDAAAHKEISETRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLNEVIAGGVEAV 342 Query: 347 MKATLA 352 ++ LA Sbjct: 343 IEPLLA 348 >gi|145298193|ref|YP_001141034.1| peptide chain release factor 1 [Aeromonas salmonicida subsp. salmonicida A449] gi|166223526|sp|A4SK64|RF1_AERS4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|142850965|gb|ABO89286.1| Protein chain release factor A [Aeromonas salmonicida subsp. salmonicida A449] Length = 362 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 118/309 (38%), Positives = 181/309 (58%), Gaps = 11/309 (3%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L RE L++ + + + + +NL +L LEEDD + + + L K +E + Sbjct: 36 RALTREYAQLEDIVHAFQRFR-QAEENLEATKLMLEEDDADLREMAQEELPLAKSTLEEQ 94 Query: 103 ----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 Q L D N+ YLE+ AGAGG E+ +A L RMY+R+AE++ ++ + + Sbjct: 95 EQALQVMLLPRDPKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRYAERQGWRISIVSCN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 DGE G K + G + YG LK E G HR+ R+ +S R HTS ++ V P V ++ Sbjct: 155 DGEHGGYKEVIAKVDGEHVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 +IEI+ +D +IDT+RASGAGGQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+A+A + Sbjct: 215 EQIEINANDLKIDTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 +L A+L E ++ A + + +G G +IR+Y P + + R N+ Sbjct: 275 VLSARLQAAEDERHR--AAEQSTRRNLVGSGDRSERIRTYNY-PQGRLSEHRINLTLYRL 331 Query: 336 SDVLDGDLD 344 ++++GDLD Sbjct: 332 GEIMEGDLD 340 >gi|120600166|ref|YP_964740.1| peptide chain release factor 1 [Shewanella sp. W3-18-1] gi|146291906|ref|YP_001182330.1| peptide chain release factor 1 [Shewanella putrefaciens CN-32] gi|166223604|sp|A4Y3J8|RF1_SHEPC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223606|sp|A1RNE1|RF1_SHESW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120560259|gb|ABM26186.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp. W3-18-1] gi|145563596|gb|ABP74531.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella putrefaciens CN-32] gi|319425197|gb|ADV53271.1| peptide chain release factor 1 [Shewanella putrefaciens 200] Length = 363 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/310 (37%), Positives = 180/310 (58%), Gaps = 7/310 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L+ ++ K Q D E+ LEEDD + + + ++ K E+E Sbjct: 36 RALSKEYSQLEEVVAGFKAYQQAQADLDSAKEM-LEEDDAEMREMAQEEMKAAKAELERL 94 Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E +L D ND A++E+ AGAGG E+ +A L RMY+R+AE +++ E + + Sbjct: 95 ESELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQMEVMSCN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K + + G AYG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA + Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ +E +KR S G ++R+Y P V + R N+ ++ Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333 Query: 338 VLDGDLDDFM 347 V++GDLD + Sbjct: 334 VMEGDLDAIL 343 >gi|307942489|ref|ZP_07657838.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4] gi|307774310|gb|EFO33522.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4] Length = 359 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 142/222 (63%), Gaps = 7/222 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+NDA LEV AG GG E+ +A L RMY R+AE +K E L +GE G K Sbjct: 105 ADANDAILEVRAGTGGDEAALFAGDLFRMYQRFAELNGWKVEVLSASEGEVGGFKEVIAS 164 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G N + LK E GVHR+ R+ +S R HTS +++ V P +D ++IEI+ESD RID Sbjct: 165 VSGENVFARLKFESGVHRVQRVPATESGGRIHTSAATVAVLPQAED-VDIEINESDLRID 223 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T+RASGAGGQHVNTTDSAVRITH PTG+VV Q ERSQHKNKA+A +LRA++Y+ E + Sbjct: 224 TFRASGAGGQHVNTTDSAVRITHEPTGIVVAVQDERSQHKNKARAMQLLRARIYDEE--R 281 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 + E+ + ++G G +IR+Y P V D R + Sbjct: 282 ARAASERTEARRVQVGSGDRSERIRTYNF-PQGRVTDHRIGL 322 >gi|170761198|ref|YP_001785468.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch Maree] gi|238688740|sp|B1KSR1|RF1_CLOBM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169408187|gb|ACA56598.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch Maree] Length = 358 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 130/344 (37%), Positives = 201/344 (58%), Gaps = 18/344 (5%) Query: 20 VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 ++RL+F+ K E DP + N E + L +E L+ ++ +E + D Sbjct: 2 LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E+ EE D + + + ++ + L++E + E ++L D ND ++E+ AGAGG Sbjct: 62 KEMLKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGE 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ LLRMYTR+AE++ +K E + ++ + G K T+ +KG AY LK E GVH Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E +R E K+++G Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P + D R + LDGD+D+ ++A Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEAIEA 341 >gi|148378145|ref|YP_001252686.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC 3502] gi|153932228|ref|YP_001382546.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC 19397] gi|153936703|ref|YP_001386098.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall] gi|166223548|sp|A7FQG2|RF1_CLOB1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223549|sp|A5HY35|RF1_CLOBH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148287629|emb|CAL81694.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC 3502] gi|152928272|gb|ABS33772.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC 19397] gi|152932617|gb|ABS38116.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall] Length = 358 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 130/344 (37%), Positives = 201/344 (58%), Gaps = 18/344 (5%) Query: 20 VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 ++RL+F+ K E DP + N E + L +E L+ ++ +E + D Sbjct: 2 LERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESD 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E+ EE D + + + ++ + L++E + E ++L D ND ++E+ AGAGG Sbjct: 62 KEMLKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGE 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ LLRMYTR+AE++ +K E + ++ + G K T+ +KG AY LK E GVH Sbjct: 122 EAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ V P VDD ++I I+ +D RID YRASG GGQ VNTTDS Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDININANDLRIDVYRASGHGGQCVNTTDS 240 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E +R E K+++G Sbjct: 241 AVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIA--EDRKSQVGT 298 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P + D R + LDGD+D+ ++A Sbjct: 299 GDRSERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEAIEA 341 >gi|24375323|ref|NP_719366.1| peptide chain release factor 1 [Shewanella oneidensis MR-1] gi|32171552|sp|Q8EAR3|RF1_SHEON RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|24350136|gb|AAN56810.1|AE015816_7 peptide chain release factor 1 [Shewanella oneidensis MR-1] Length = 363 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/310 (37%), Positives = 181/310 (58%), Gaps = 7/310 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L+ ++ K Q D E+ LEEDD + + + ++ K+E+E Sbjct: 36 RALSKEYSQLEEVVAGFKAYQQAQADLESAKEM-LEEDDAEMREMAQEEIKAAKVELERL 94 Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E +L D ND A++E+ AGAGG E+ +A L RMY+R+AE +++ E + + Sbjct: 95 EAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K + + G AYG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA + Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ +E +KR S G ++R+Y P V + R N+ ++ Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333 Query: 338 VLDGDLDDFM 347 V++GDLD + Sbjct: 334 VMEGDLDAIL 343 >gi|294142153|ref|YP_003558131.1| peptide chain release factor 1 [Shewanella violacea DSS12] gi|293328622|dbj|BAJ03353.1| peptide chain release factor 1 [Shewanella violacea DSS12] Length = 361 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 122/343 (35%), Positives = 196/343 (57%), Gaps = 20/343 (5%) Query: 17 DNAVQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 D+ +++L L + E DP + + + L +E L++ ++ K Q + ++ Sbjct: 3 DSVIRKLEGLLERNEEVLALLSDPGVISDQDRFRALSKEYSQLEDVVATFKAFQ-QATED 61 Query: 70 LILLELALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L + L E+D I + + ++ +KLE E Q L D N+A++E+ AG Sbjct: 62 LDAAKEMLSENDPEIKEMAQEEMKDAKSIIVKLEDEL-QILLLPKDPNDDNNAFVEIRAG 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L RMYTR+ E +++TE + ++GE G K + + G YG LK E Sbjct: 121 AGGDEAAIFAGDLYRMYTRYFETNRWQTEIMNANEGEHGGFKEVIIKVSGEGVYGRLKFE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS ++ V V ++ I+I+ +D ++DT+RASGAGGQHVN Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLAEVPEAEAIKINPADLKVDTFRASGAGGQHVN 240 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSA+R+THIP+G+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + + Sbjct: 241 KTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSAEET--TRRN 298 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +G G +IR+Y P V D R N+ +DV++G+LD Sbjct: 299 LVGSGDRSERIRTYNY-PQGRVSDHRINLTLYRLNDVMEGELD 340 >gi|254373464|ref|ZP_04988952.1| peptide chain release factor 1 [Francisella tularensis subsp. novicida GA99-3549] gi|151571190|gb|EDN36844.1| peptide chain release factor 1 [Francisella novicida GA99-3549] Length = 361 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 11/311 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L +E HL+ + KE L D E+ L E D +++ + L+ +E + Sbjct: 38 LSKEYSHLEPIVKAFKEYTQALKDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96 Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E +L D ND +LE+ AG GG E+ ++ L +MY+++AE+R +K E + +G Sbjct: 97 ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 ++KL + E+ K+++ ++ K+ +G G +IR+Y P V D R N+ + Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333 Query: 338 VLDGDLDDFMK 348 V++G LD ++ Sbjct: 334 VMEGSLDSIIQ 344 >gi|254226890|ref|ZP_04920458.1| peptide chain release factor 1 [Vibrio cholerae V51] gi|125620572|gb|EAZ48938.1| peptide chain release factor 1 [Vibrio cholerae V51] Length = 362 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 118/327 (36%), Positives = 184/327 (56%), Gaps = 11/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + ++L+ E +EDD + + D Sbjct: 25 DPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83 Query: 92 LQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E Q L D + +LE+ AGAGG E+ +A L RMY+R+AEK Sbjct: 84 IKAAKAAIERLTDELQILLLPKDPDDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + + E G K + G AYG LK E G HR+ R+ ++ R HTS Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A ++L A++ + E KR A I ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ ++V++GD+ + + Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLIDPVI 347 >gi|312879994|ref|ZP_07739794.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas paucivorans DSM 12260] gi|310783285|gb|EFQ23683.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas paucivorans DSM 12260] Length = 357 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 131/342 (38%), Positives = 190/342 (55%), Gaps = 28/342 (8%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILL------ 73 S + ++ DP L N+ E L + L ++ ++E + R+ D LL Sbjct: 14 FSEIESRMVDPALSSNLQEMHALGKRHSELSPIVAALREYRGVLRRIQDARELLSQEDEG 73 Query: 74 --ELALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ELA EE S L+E + L QRIK+ + L D+ D +E+ AGAGG E+ Sbjct: 74 LRELAKEE--LSTLEEQVEPLEQRIKVLL-------LPQDPNDAKDVVIEIRAGAGGEEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+AE+ + +E L +D G K +KG Y LK E GVHR+ Sbjct: 125 ALFAADLFRMYNRFAEREGWGSELLSTNDTGIGGYKEVVFHLKGTGVYSKLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI ++ R HTS +++ V P ++ +++++ D +IDTYRASGAGGQ+VN TDSAV Sbjct: 185 QRIPVTEAGGRIHTSTATVAVLPEAEE-VDVQVRTEDLKIDTYRASGAGGQYVNMTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV CQ ERSQ KN+ +A +LR +LY+LELQK++ A + K ++G G Sbjct: 244 RITHVPTGLVVTCQDERSQLKNRVKAMQLLRTRLYDLELQKQQ--AVMAAERKGQVGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R VLDGDL + ++A Sbjct: 302 RSERIRTYSY-PQNRLTDHRIGFTLYKLDQVLDGDLYELVEA 342 >gi|260914191|ref|ZP_05920664.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325] gi|260631824|gb|EEX50002.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325] Length = 360 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 114/280 (40%), Positives = 174/280 (62%), Gaps = 12/280 (4%) Query: 80 DDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND---AYLEVHAGAGGTESQDWA 134 DD S+ + + ++ K E+E +Q + LL + D ND YLE+ AG GG E+ +A Sbjct: 70 DDLSMKEMAQEEIEECKAELEQVEQQLQILLLPK-DPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEGKRWRIEVLSANESEQGGYKEIIVKVSGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++E+ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIVQAEKERQEQ--QQADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P V D R N+ +V++G +D+ ++ + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|332678840|gb|AEE87969.1| Peptide chain release factor 1 [Francisella cf. novicida Fx1] Length = 361 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 11/311 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L +E HL+ + KE L D E+ L E D +++ + L+ +E + Sbjct: 38 LSKEYSHLEPIVKAFKEYTQALEDKQTAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96 Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E +L D ND +LE+ AG GG E+ ++ L +MY+++AE+R +K E + +G Sbjct: 97 ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 ++KL + E+ K+++ ++ K+ +G G +IR+Y P V D R N+ + Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333 Query: 338 VLDGDLDDFMK 348 V++G LD ++ Sbjct: 334 VMEGSLDSIIQ 344 >gi|117919221|ref|YP_868413.1| peptide chain release factor 1 [Shewanella sp. ANA-3] gi|166223605|sp|A0KT88|RF1_SHESA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|117611553|gb|ABK47007.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp. ANA-3] Length = 363 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 117/310 (37%), Positives = 180/310 (58%), Gaps = 7/310 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L+ ++ K Q D E+ LEEDD + + + ++ K E+E Sbjct: 36 RALSKEYSQLEEVVAGFKAYQQAQADLESAKEM-LEEDDAEMREMAQEEIKAAKAELERL 94 Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E +L D ND A++E+ AGAGG E+ +A L RMY+R+AE +++ E + + Sbjct: 95 EAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K + + G AYG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA + Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ +E +KR S G ++R+Y P V + R N+ ++ Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333 Query: 338 VLDGDLDDFM 347 V++GDLD + Sbjct: 334 VMEGDLDAIL 343 >gi|170723617|ref|YP_001751305.1| peptide chain release factor 1 [Pseudomonas putida W619] gi|229470352|sp|B1JEP6|RF1_PSEPW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169761620|gb|ACA74936.1| peptide chain release factor 1 [Pseudomonas putida W619] Length = 360 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 152/243 (62%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE G K + Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + YG LK E G HR+ R+ +S R HTS ++ V P D+ + IEI+ +D R+DT Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +++ Sbjct: 229 YRASGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAA 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + I K +G G +IR+Y P V D R N+ S D+L G +D ++ Sbjct: 289 QNA--IASERKLLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYSLDDILAGGVDAVIEP 345 Query: 350 TLA 352 LA Sbjct: 346 LLA 348 >gi|126701107|ref|YP_001090004.1| peptide chain release factor 1 [Clostridium difficile 630] gi|254977108|ref|ZP_05273580.1| peptide chain release factor 1 [Clostridium difficile QCD-66c26] gi|255094436|ref|ZP_05323914.1| peptide chain release factor 1 [Clostridium difficile CIP 107932] gi|255102693|ref|ZP_05331670.1| peptide chain release factor 1 [Clostridium difficile QCD-63q42] gi|255308514|ref|ZP_05352685.1| peptide chain release factor 1 [Clostridium difficile ATCC 43255] gi|255316188|ref|ZP_05357771.1| peptide chain release factor 1 [Clostridium difficile QCD-76w55] gi|255518849|ref|ZP_05386525.1| peptide chain release factor 1 [Clostridium difficile QCD-97b34] gi|255652028|ref|ZP_05398930.1| peptide chain release factor 1 [Clostridium difficile QCD-37x79] gi|255657438|ref|ZP_05402847.1| peptide chain release factor 1 [Clostridium difficile QCD-23m63] gi|260685003|ref|YP_003216288.1| peptide chain release factor 1 [Clostridium difficile CD196] gi|260688661|ref|YP_003219795.1| peptide chain release factor 1 [Clostridium difficile R20291] gi|296449035|ref|ZP_06890825.1| peptide chain release factor RF1 [Clostridium difficile NAP08] gi|296879858|ref|ZP_06903831.1| peptide chain release factor RF1 [Clostridium difficile NAP07] gi|306521770|ref|ZP_07408117.1| peptide chain release factor 1 [Clostridium difficile QCD-32g58] gi|119361524|sp|Q180Y2|RF1_CLOD6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|115252544|emb|CAJ70387.1| Peptide chain release factor 1 (RF-1) [Clostridium difficile] gi|260211166|emb|CBA66621.1| peptide chain release factor 1 [Clostridium difficile CD196] gi|260214678|emb|CBE07314.1| peptide chain release factor 1 [Clostridium difficile R20291] gi|296262128|gb|EFH08933.1| peptide chain release factor RF1 [Clostridium difficile NAP08] gi|296429147|gb|EFH15021.1| peptide chain release factor RF1 [Clostridium difficile NAP07] Length = 354 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 130/336 (38%), Positives = 185/336 (55%), Gaps = 31/336 (9%) Query: 32 DPHLWQNVIEAK-------MLMRERQHLDNAISFIKEI----QDRLCDNLILLELALEED 80 D +WQ I+ M RE + + ++I KEI D L +ELA E+ Sbjct: 27 DQKVWQKYIKEHADLEPIVMKYREYKSVLDSIKESKEILQEESDEELRELAKMELAEMEE 86 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + L+E IK+ + L D + +E+ GAGG E+ +A L RM Sbjct: 87 KVAPLEE------EIKILL-------LPKDPNDDKNVIVEIRGGAGGDEAALFAGDLFRM 133 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y+R+AE+R++K E L D G K + +IKG AY LK E GVHR+ RI +S Sbjct: 134 YSRYAERRRWKIELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQRIPSTESGG 193 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS S++ V P V+D +E+EI+ +D RID +R+SG GGQ VNTTDSAVR+THIPTG V Sbjct: 194 RIHTSTSTVAVLPEVED-VEVEINPNDLRIDVFRSSGNGGQSVNTTDSAVRVTHIPTGEV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ +SQ KNK QA +L+A+LY+ L E+ +I K+++G G +IR+Y Sbjct: 253 VSCQDGKSQLKNKEQALKILKARLYDKALA--EQHKDIAAERKSQVGTGDRSERIRTYNF 310 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 P + D R N+ LDGD+D+ + A + + Sbjct: 311 -PQGRISDHRINLTLYKLDAFLDGDIDEMIDALITV 345 >gi|88606704|ref|YP_505023.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ] gi|119361507|sp|Q2GKS8|RF1_ANAPZ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|88597767|gb|ABD43237.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ] Length = 359 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 113/245 (46%), Positives = 158/245 (64%), Gaps = 10/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A LE+ AG GG E+ + L RMY ++AE++ +K E + I G K A+ I Sbjct: 108 DSRNAILEIRAGTGGEEAALFVGNLYRMYLKYAERKNWKVETINISTTGIGGYKEASFSI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + + LK E GVHR+ R+ +S+ R HTS +++ V P V++ ++++I E D RID Sbjct: 168 GGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEE-VDLKIDEKDLRIDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVRITHIPTG+VV Q E+SQHKNK++A +LRA+LY LE QKR Sbjct: 227 YRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSY-VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347 EE I + K++IG G +IR+Y LQ + D R N+ V+ +GDLD+F+ Sbjct: 287 EE--EISKMRKSQIGSGDRSERIRTYNFLQ--SRITDHRINLTSYRLDYVMKEGDLDEFI 342 Query: 348 KATLA 352 A +A Sbjct: 343 DALVA 347 >gi|254374925|ref|ZP_04990406.1| peptide chain release factor 1 [Francisella novicida GA99-3548] gi|151572644|gb|EDN38298.1| peptide chain release factor 1 [Francisella novicida GA99-3548] Length = 361 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 11/311 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L +E HL+ + KE L D E+ L E D +++ + L+ +E + Sbjct: 38 LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96 Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E +L D ND +LE+ AG GG E+ ++ L +MY+++AE+R +K E + +G Sbjct: 97 ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 ++KL + E+ K+++ ++ K+ +G G +IR+Y P V D R N+ + Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333 Query: 338 VLDGDLDDFMK 348 V++G LD ++ Sbjct: 334 VMEGSLDSIIQ 344 >gi|330445230|ref|ZP_08308882.1| peptide chain release factor 1 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489421|dbj|GAA03379.1| peptide chain release factor 1 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 362 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 193/346 (55%), Gaps = 11/346 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L + V+R + DP + + + L +E L+ + Q + ++L+ Sbjct: 6 LVKLETLVERYEEVQHLLGDPDVLADQNRFRALSKEYSQLEEVTKCFQAYQ-QAKEDLVA 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E +EDD + + + ++ K E+E E +L D ND ++E+ AGAGG Sbjct: 65 AEEMAQEDDAEMREMAQEEIKEAKAEIERLADELQVLLLPKDPNDDRNCFVEIRAGAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+++AE+R ++ E + + E+ G K + G AYG LK E G H Sbjct: 125 EAGIFAGDLFRMYSKYAERRGWRVEVISENRAEQGGYKEMIAKVNGDGAYGILKFESGGH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ V P V ++ EI+ D +IDT+R+SGAGGQHVNTTDS Sbjct: 185 RVQRVPATESQGRVHTSACTVAVLPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR A + + +G Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRH--AEEASTRRNLLGS 302 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + ++V++GDLD ++ L Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQPVL 347 >gi|220932633|ref|YP_002509541.1| peptide chain release factor 1 [Halothermothrix orenii H 168] gi|219993943|gb|ACL70546.1| peptide chain release factor 1 [Halothermothrix orenii H 168] Length = 358 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 130/346 (37%), Positives = 199/346 (57%), Gaps = 21/346 (6%) Query: 13 LFDW----DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDR 65 +FD D V R + LN + DP + N + + L++E L +S +E + R Sbjct: 1 MFDLTKKLDKLVDRYNELNKEISDPDVINNSEQYQKLLKEHGKLKEIVSKYREYKKVLSR 60 Query: 66 LCDNLILLELALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + ++E E++ + L+E + ++++ E+ Y L D + +E+ Sbjct: 61 VEEAHSIIEEEEEQEVRELAEMELKELTPRKEKMEDELTYML---LPEDPNDEKNVIVEI 117 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG E+ +A L RMY+R+AE + +KTE + + G K ++G N Y L Sbjct: 118 RAGAGGDEAGLFAADLYRMYSRYAESKNWKTEVISANASGIGGYKEIIFTVEGKNVYSRL 177 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS +++ V P ++ ++++I +D RID YR+SG GGQ Sbjct: 178 KYESGVHRVQRVPTTESGGRIHTSTATVAVLPEAEE-VDVDIDPNDLRIDVYRSSGPGGQ 236 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH PTG+VV CQ E+SQHKNKA+A +LRA+L EL ++E+ A I E+ Sbjct: 237 SVNTTDSAVRITHEPTGLVVSCQDEKSQHKNKARAMRILRARLK--ELMEKEKQAEIDEA 294 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 K++IG G +IR+Y P V D R N+ +D+LDG+LD Sbjct: 295 RKSQIGSGDRSEKIRTYNF-PQGRVSDHRINLTIHQLNDILDGNLD 339 >gi|237745909|ref|ZP_04576389.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS] gi|229377260|gb|EEO27351.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS] Length = 360 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 152/243 (62%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG ES +A LLRMYTR+AEK ++K E + E G + + + Sbjct: 107 DGKNIYLEIRAGTGGDESALFAGDLLRMYTRFAEKNRWKAEIVSASMSELGGYREVIVRL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ ++ R HTS ++ V P DD ++ I+ +D R+DT Sbjct: 167 VGKDVYSRLKFESGGHRVQRVPVTETQGRIHTSACTVAVMPEADDVSDVHINPADIRVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQHKNKAQA +L A++ + ++Q Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQ-- 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P V D R N+ ++DGD+D+ + A Sbjct: 285 EQQAKEAATRKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLEFIMDGDMDELVSA 343 Query: 350 TLA 352 +A Sbjct: 344 LVA 346 >gi|332184657|gb|AEE26911.1| Peptide chain release factor 1 [Francisella cf. novicida 3523] Length = 361 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 11/311 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L +E HL+ + KE L D E+ L E D +++ + L+ +E + Sbjct: 38 LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANETIEKLES 96 Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E +L D ND +LE+ AG GG E+ ++ L +MY+++AE+R +K E + +G Sbjct: 97 ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 ++KL + E+ K+++ ++ K+ +G G +IR+Y P V D R N+ + Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333 Query: 338 VLDGDLDDFMK 348 V++G LD ++ Sbjct: 334 VMEGSLDSIIQ 344 >gi|262068281|ref|ZP_06027893.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC 33693] gi|291378019|gb|EFE85537.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC 33693] Length = 357 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 105/244 (43%), Positives = 149/244 (61%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +A L RMY+R+AE+RK+K E +E DGE G+K I Sbjct: 106 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDT Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + ++G G +IR+Y P + D R + LDGD+D+ + A Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342 Query: 350 TLAI 353 + Sbjct: 343 LITF 346 >gi|297172147|gb|ADI23128.1| protein chain release factor A [uncultured gamma proteobacterium HF0770_09E07] Length = 359 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 125/349 (35%), Positives = 196/349 (56%), Gaps = 25/349 (7%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---------DRLC 67 D+ ++ L+T+ DP L ++ + L +E + + + Q D L Sbjct: 10 DSIQKKADDLSTQLSDPKLTSDINQLTKLNKEYSEIKDVVENWNRYQELEASIEDLDTLA 69 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + + LALEE D + L++I+ E+ + L + D ++++E+ AGAGG Sbjct: 70 KDEEMKSLALEEKD-----QNEKELEKIEAEI---MIQLLPKDKDDERNSFVELRAGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEAL-EIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 E+ + L RMY R+AE+ K+K E + EI G G K + + G + YG LK E G Sbjct: 122 DEAAIFVGDLYRMYGRFAERSKWKVEKIKEIPSGT-GGFKEIVIKVIGADTYGNLKFESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS +++ V P +DD E ++ S+ R+DTYRASGAGGQHVN T Sbjct: 181 VHRVQRVPLTESQGRIHTSTATVAVLPEIDDIEEKDLDMSEIRVDTYRASGAGGQHVNKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+P+G+VV+CQ +RSQHKNKA+A +L +K+Y++E QK E+ K+ + Sbjct: 241 DSAVRLTHLPSGIVVECQDDRSQHKNKAKALGLLSSKIYDIEKQKIEQ--EKASERKSLV 298 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G G +IR+Y P + D R + + +DGD+D+ + + A Sbjct: 299 GTGDRSEKIRTYNF-PQGRITDHRLKLTLYNIDSFIDGDIDEMLNSLKA 346 >gi|119775698|ref|YP_928438.1| peptide chain release factor 1 [Shewanella amazonensis SB2B] gi|166223600|sp|A1S8R2|RF1_SHEAM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119768198|gb|ABM00769.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella amazonensis SB2B] Length = 363 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 120/313 (38%), Positives = 181/313 (57%), Gaps = 11/313 (3%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L++ + K Q + D E+ LEEDD + + + ++ K +E Sbjct: 36 RALSKEYAQLEDVVKGFKAYQQAVADLETAKEM-LEEDDPELKEMAQEEIKSAKASLERL 94 Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E +L D ND A++E+ AGAGG E+ +A L RMY+R+AE ++++ E + + Sbjct: 95 EAELQILLLPKDPNDEANAFVEIRAGAGGDEAAIFAGDLFRMYSRYAETQRWQVEIMSAN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K G YG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EGEHGGYKEVIARFSGERVYGKLKFESGGHRVQRVPETESQGRVHTSACTVAVLHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 +EI+ S+ RIDT+RASGAGGQHVN TDSA+RITH+PTG VV+CQ ERSQHKNKA+A + Sbjct: 215 EAVEINPSELRIDTFRASGAGGQHVNKTDSAIRITHLPTGTVVECQDERSQHKNKARAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 +L A+L E +KR + + +G G +IR+Y P V D R N+ Sbjct: 275 VLVARLQAAEDEKRRSAE--ATTRRNLVGSGDRSERIRTYNF-PQGRVSDHRINLTLYRL 331 Query: 336 SDVLDGDLDDFMK 348 ++V++GDL+ ++ Sbjct: 332 NEVMEGDLNALIE 344 >gi|238919470|ref|YP_002932985.1| peptide chain release factor 1 [Edwardsiella ictaluri 93-146] gi|259585221|sp|C5B814|RF1_EDWI9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238869039|gb|ACR68750.1| peptide chain release factor 1, putative [Edwardsiella ictaluri 93-146] Length = 360 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 152/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K + Sbjct: 107 DERDCFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P V ++ +I+ +D RIDT Sbjct: 167 SGDGAYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 YRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + +G G ++R+Y P V D R N+ +V++G LD+ ++ Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRVRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDNLIEP 343 Query: 350 TL 351 + Sbjct: 344 IV 345 >gi|208779474|ref|ZP_03246819.1| peptide chain release factor 1 [Francisella novicida FTG] gi|208744435|gb|EDZ90734.1| peptide chain release factor 1 [Francisella novicida FTG] Length = 361 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 118/311 (37%), Positives = 179/311 (57%), Gaps = 11/311 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L +E HL+ + KE L D E+ L E D +++ + L+ +E + Sbjct: 38 LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96 Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E +L D ND +LE+ AG GG E+ ++ L +MY+++AE+R +K E + +G Sbjct: 97 ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 ++KL + E+ K+++ ++ K+ +G G +IR+Y P V D R N+ + Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333 Query: 338 VLDGDLDDFMK 348 V++G LD ++ Sbjct: 334 VMEGSLDSIIQ 344 >gi|221135300|ref|ZP_03561603.1| peptide chain release factor 1 [Glaciecola sp. HTCC2999] Length = 361 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 121/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V+R + DP + + + L +E L++ + ++ Q D E+ ++E Sbjct: 13 VERFEEVQALLGDPDVIGDQNRFRSLSKEYAQLEDVVKSFRDYQGAQEDLASANEM-MQE 71 Query: 80 DDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 DD + + + ++ K +E Q L D ++ +LE+ AGAGG E+ +A Sbjct: 72 DDAEMREMAQEEIKAAKASIETLEQALQILLLPRDPQDDSNCFLEIRAGAGGDEAAIFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE + ++ + + ++GE G K I G AYG +K E G HR+ R+ Sbjct: 132 DLYRMYSRYAETKGWRVDLVSANEGEHGGYKEVIANIIGDGAYGVMKFESGGHRVQRVPE 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V V +S I+I+ +D R+DT+RASGAGGQHVN TDSA+RITHI Sbjct: 192 TESQGRIHTSACTVAVLAEVAESEAIDINPADLRVDTFRASGAGGQHVNKTDSAIRITHI 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+GVVV+CQ ERSQHKN+A+A ++L+++L +E +KR+ A + K+ +G G +I Sbjct: 252 PSGVVVECQDERSQHKNRAKAMSVLQSRLNNIEKEKRD--AEEASTRKSLVGSGDRSERI 309 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ DV+ GD+D ++ Sbjct: 310 RTYNY-PQGRVTDHRINLTLYKLDDVVAGDVDALLE 344 >gi|253681032|ref|ZP_04861835.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873] gi|253562881|gb|EES92327.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873] Length = 357 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 125/335 (37%), Positives = 194/335 (57%), Gaps = 15/335 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82 L+ K DP + N E + L +E L+ ++ +E ++ L N LL + D Sbjct: 15 LSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELESNKELLSEENDRDMK 74 Query: 83 SILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139 ++QE L+ ++ E E K LL + D + ++E+ AGAGG E+ +A L R Sbjct: 75 EMIQEEIKTLEENIVRDEEELKIL--LLPKDPNDDKNVFIEIRAGAGGDEAALFAANLFR 132 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MYTR+AE+ +KTE + ++ + G K +++G +AY +K E GVHR+ R+ +S+ Sbjct: 133 MYTRYAERHGWKTELMSTNETDIGGFKEVVFMLRGDSAYSKMKFESGVHRVQRVPDTESS 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ V P VDD ++I+I +D R+D +RASG GGQ VNTTDSAVR+THIPTG+ Sbjct: 193 GRIHTSTATVAVLPEVDD-VDIQIDPNDIRVDVFRASGHGGQCVNTTDSAVRMTHIPTGI 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VV CQ E+SQ KNK +A +L+A+LY E + E A+I K+++G G +IR+Y Sbjct: 252 VVSCQDEKSQLKNKEKALKVLKARLY--EKAEAERAASISADRKSQVGTGDRSERIRTYN 309 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V + R + LDGD+++ + A + Sbjct: 310 Y-PQGRVTEHRIGVTLYKLEAFLDGDMEEIIDALI 343 >gi|301156075|emb|CBW15546.1| peptide chain release factor RF-1 [Haemophilus parainfluenzae T3T1] Length = 360 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 114/294 (38%), Positives = 179/294 (60%), Gaps = 10/294 (3%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLE 120 ++L N+ EL L++ + + E ++++E +Q + LL + D ND YLE Sbjct: 56 NQLNSNIAEAELMLDDPEMKEMAEMEIEESKVEIEDVEQQLQILLLPK-DPNDEYNCYLE 114 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + G YG Sbjct: 115 IRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQ 174 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGG Sbjct: 175 LKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGG 234 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ + A + Sbjct: 235 QHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER--QAAEQAD 292 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + +G G +IR+Y P V D R N+ +V++G +D+ ++ + Sbjct: 293 TRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTLYRLDEVMNGKIDELIQPII 345 >gi|253990004|ref|YP_003041360.1| peptide chain release factor 1 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781454|emb|CAQ84617.1| peptide chain release factor rf-1 [Photorhabdus asymbiotica] Length = 360 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 107/235 (45%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY+R+AE R++K E + +DGE G K + Sbjct: 107 DERNCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWKIEVMSANDGEHGGYKEIIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ EIS SD RIDT Sbjct: 167 SGEQVYGHLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEIPEAELPEISPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E++KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +E + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QEAE--ASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|307299656|ref|ZP_07579452.1| peptide chain release factor 1 [Thermotogales bacterium mesG1.Ag.4.2] gi|306914708|gb|EFN45098.1| peptide chain release factor 1 [Thermotogales bacterium mesG1.Ag.4.2] Length = 360 Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 108/239 (45%), Positives = 152/239 (63%), Gaps = 7/239 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD + +E+ AG GG E+ +A L RMYTR+AE+ +K+E ++ ++ + G K Sbjct: 105 ADERNIIIEIRAGTGGEEAALFAADLFRMYTRYAERNNWKSEIIDSNETDIGGFKEVIFQ 164 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G + + LK E GVHR+ R+ +S R HTS +++ V P V ++ E++I +D RID Sbjct: 165 IRGRSVFSKLKYESGVHRVQRVPTTESGGRIHTSTATVAVLPEVSET-EVKIDPADLRID 223 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVN TDSAVRI H PTG+VV Q+ERSQH+NKA+A +LRA+LYE+ K Sbjct: 224 TYRSSGAGGQHVNKTDSAVRIVHEPTGIVVAVQKERSQHQNKARALEILRARLYEMYSSK 283 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E I E+ +T+IG G +IR+Y P V D R N V+DGDLD+ + Sbjct: 284 AEN--EITEARRTQIGTGERSEKIRTYNF-PQNRVTDHRINFTSYRLLYVMDGDLDELV 339 >gi|269961569|ref|ZP_06175931.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3] gi|269833610|gb|EEZ87707.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3] Length = 362 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 121/326 (37%), Positives = 185/326 (56%), Gaps = 17/326 (5%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI------- 84 DP + N + + L +E L+ + + Q + D+LI E EDD + Sbjct: 25 DPDVIGNQDKFRALSKEYSQLEEVTNCFQAYQ-QAQDDLIAAEDMANEDDEEMREMAQEE 83 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 ++E D ++R+ E+ Q L D + +LE+ AGAGG E+ +A L RMY+++ Sbjct: 84 IKEAKDAIERLTDEL---QILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKY 140 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AEKR ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HT Sbjct: 141 AEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHT 200 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ Sbjct: 201 SACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQ 260 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321 ERSQHKNKA+A +L A++ + E ++R A + ++ + +G G +IR+Y P Sbjct: 261 DERSQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQG 317 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFM 347 V D R N+ ++V++GDL + Sbjct: 318 RVSDHRINLTIYRLNEVMEGDLQSLI 343 >gi|238756935|ref|ZP_04618123.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236] gi|238704765|gb|EEP97294.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236] Length = 360 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 104/235 (44%), Positives = 145/235 (61%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + DGE G K + Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASDGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 Q--LAVASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|294782570|ref|ZP_06747896.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA] gi|294481211|gb|EFG28986.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA] Length = 357 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 105/244 (43%), Positives = 149/244 (61%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +A L RMY+R+AE+RK+K E +E DGE G+K I Sbjct: 106 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDT Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVIVDPKDLKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + ++G G +IR+Y P + D R + LDGD+D+ + A Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342 Query: 350 TLAI 353 + Sbjct: 343 LITF 346 >gi|237740336|ref|ZP_04570817.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31] gi|229422353|gb|EEO37400.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31] Length = 357 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 104/244 (42%), Positives = 149/244 (61%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +A L RMY+R+AE++K+K E +E DGE G+K I Sbjct: 106 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEVAFTI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDT Sbjct: 166 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 226 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + ++G G +IR+Y P + D R + LDGD+D+ + A Sbjct: 286 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 342 Query: 350 TLAI 353 + Sbjct: 343 LITF 346 >gi|58584615|ref|YP_198188.1| peptide chain release factor 1 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497913|sp|Q5GSS8|RF1_WOLTR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|58418931|gb|AAW70946.1| Protein chain release factor A [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 359 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 110/252 (43%), Positives = 160/252 (63%), Gaps = 12/252 (4%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L E DS +A LE+ AG GG E+ +A ML RMY ++AE+R +K E + I G K Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYK 162 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A+ LI G + LK E GVHR+ R+ +S+ R HTS +++ + P V++ ++ +I E Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEE-VDFKIEEK 221 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YR+SG GGQ VNTTDSAVR+TH+PT +VV Q E+SQHKNKA+A +LRA+LYE Sbjct: 222 DLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYE 281 Query: 287 LELQKREEIANIGESS--KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-D 340 +E QK+E I S+ K++IG G +IR+Y P + D R N+ ++ + Sbjct: 282 IERQKKE----IERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTSHQLEQIIKE 336 Query: 341 GDLDDFMKATLA 352 G+LD+F++ ++ Sbjct: 337 GELDEFIEVLIS 348 >gi|56707338|ref|YP_169234.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis SCHU S4] gi|110669808|ref|YP_666365.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis FSC198] gi|224456401|ref|ZP_03664874.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370015|ref|ZP_04986022.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis FSC033] gi|254874173|ref|ZP_05246883.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis MA00-2987] gi|61214577|sp|Q5NIA8|RF1_FRATT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361541|sp|Q14JR1|RF1_FRAT1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54112995|gb|AAV29131.1| NT02FT0305 [synthetic construct] gi|56603830|emb|CAG44801.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320141|emb|CAL08184.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis FSC198] gi|151568260|gb|EDN33914.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis FSC033] gi|254840172|gb|EET18608.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis MA00-2987] gi|282158463|gb|ADA77854.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis NE061598] Length = 361 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 119/313 (38%), Positives = 181/313 (57%), Gaps = 15/313 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEV 99 L +E HL+ + K+ L D E+ L E D +++ + L+ KLE Sbjct: 38 LSKEYSHLEPIVKAFKKYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96 Query: 100 EYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 E + F LL + D + +LE+ AG GG E+ ++ L +MY+++AE+R +K E + Sbjct: 97 ELQIF--LLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISAS 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 155 EGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEV 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A + Sbjct: 215 EGIDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 ML++KL + E+ K+++ ++ K+ +G G +IR+Y P V D R N+ Sbjct: 275 MLKSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKL 331 Query: 336 SDVLDGDLDDFMK 348 +V++G LD ++ Sbjct: 332 DEVMEGSLDSIIQ 344 >gi|197120814|ref|YP_002132765.1| peptide chain release factor 1 [Anaeromyxobacter sp. K] gi|238689845|sp|B4UAY8|RF1_ANASK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|196170663|gb|ACG71636.1| peptide chain release factor 1 [Anaeromyxobacter sp. K] Length = 370 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 116/336 (34%), Positives = 195/336 (58%), Gaps = 12/336 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QR L DP + N + + +ER ++ ++ ++ + +L +++ E L + Sbjct: 15 QRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYR-KLLEDVEGNEALLADK 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANM 136 D + + + L +++ +VE + + L D D +E+ AGAGG E+ +A Sbjct: 74 DPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGLFAAE 133 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 ++RMY R+AE+R ++ E ++ G G+K ATL + G Y LK E GVHR+ R+ Sbjct: 134 VMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQRVPAT 193 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P ++ I+++++ +D +D +R++G+GGQ VNTTDSAVR+TH P Sbjct: 194 EAQGRIHTSTVTVAVMPEAEE-IDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRLTHKP 252 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV+CQQE+SQ KN+ A MLRAKL+E+E Q+R+ A + K+++G G +IR Sbjct: 253 TGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIE-QERQRSARDA-TRKSQVGTGDRSEKIR 310 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +Y P + D R N + + V+DGD+ D + A Sbjct: 311 TYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDA 345 >gi|117621299|ref|YP_857649.1| peptide chain release factor 1 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166223525|sp|A0KMZ8|RF1_AERHH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|117562706|gb|ABK39654.1| peptide chain release factor 1 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 362 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 117/309 (37%), Positives = 180/309 (58%), Gaps = 11/309 (3%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L RE L++ + ++ + + +NL LEEDD + + + L K E + Sbjct: 36 RALTREYAQLEDIVHAFQQFR-QAEENLDATRQMLEEDDADLREMAQEELPLAKATFEEQ 94 Query: 103 ----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 Q L D N+ YLE+ AGAGG E+ +A L RMY+R+AE++ ++ + + Sbjct: 95 EQALQVMLLPRDPKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRYAERQGWRVSIVSCN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 DGE G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P V ++ Sbjct: 155 DGEHGGYKEVIAKVEGEHVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 +IEI+ S+ +IDT+RASGAGGQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+A+A + Sbjct: 215 EQIEINPSELKIDTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 +L A+L E ++ A + + +G G +IR+Y P + + R N+ Sbjct: 275 VLSARLQAAEDERHR--AAEQSTRRNLVGSGDRSERIRTYNY-PQGRLSEHRINLTLYRL 331 Query: 336 SDVLDGDLD 344 ++++GDLD Sbjct: 332 GEIMEGDLD 340 >gi|331082607|ref|ZP_08331730.1| peptide chain release factor 1 [Lachnospiraceae bacterium 6_1_63FAA] gi|330400226|gb|EGG79868.1| peptide chain release factor 1 [Lachnospiraceae bacterium 6_1_63FAA] Length = 358 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 126/357 (35%), Positives = 209/357 (58%), Gaps = 22/357 (6%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68 +FD ++ + RL + + +P + + + LM+E+ Q + +A + K ++ + D Sbjct: 1 MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124 +L++L+ +E+ +L +E SD +RI+ E +Q +L D ND +E+ AG Sbjct: 61 SLMMLDEESDEEMREMLKEELSDAKKRIE---ELEQELKILLLPKDPNDDKNVIVEIRAG 117 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A + RMY ++AE + ++TE L +++ G K T +I G AY LK E Sbjct: 118 AGGDEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYE 177 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS ++ + P ++ I+ E+ +DC+ D +RASG GGQ VN Sbjct: 178 SGVHRVQRVPETESGGRIHTSTITVAIMPEAEE-IDFELDLNDCKFDVFRASGNGGQCVN 236 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LY++ELQKR + E+ ++ Sbjct: 237 TTDSAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHDAE--AEARRS 294 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD----LDDFMKATLAIK 354 ++G G +IR+Y P V D R + +++GD +D+ + A AI+ Sbjct: 295 QVGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDIQEVIDNLIAADQAIR 350 >gi|239617233|ref|YP_002940555.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1] gi|239506064|gb|ACR79551.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1] Length = 361 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 112/273 (41%), Positives = 164/273 (60%), Gaps = 11/273 (4%) Query: 86 QETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +E N+ ++ E+E + L+ E D +E+ AG GG E+ +A L RMYT Sbjct: 76 EEAEKNIAELQKEIEQIELNLKFLLIPDELGGKDIIVEIRAGTGGEEAALFAGDLFRMYT 135 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+AE+ +K E LE ++ + G K T IKG + + LK E GVHR+ R+ +S R Sbjct: 136 RYAERNSWKVETLESNETDLGGFKEVTFQIKGKDVFRKLKYESGVHRVQRVPQTESGGRI 195 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS +++ V P + +++ I S+ RIDT+R+SGAGGQHVN T+SAVRI H+PTG+ V Sbjct: 196 HTSTATVAVLPKASE-VDVAIDPSELRIDTFRSSGAGGQHVNRTESAVRIVHLPTGITVT 254 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 Q ERSQH+NKA+A +LRA+LY L ++E + + + +++IG G +IR+Y P Sbjct: 255 VQSERSQHQNKARAMEILRARLYSLYRSQQE--STLSQQRRSQIGTGERSEKIRTYNF-P 311 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R N D+LDGDLD+ + A LA Sbjct: 312 QNRVTDHRINYTTYRLQDILDGDLDELI-AKLA 343 >gi|304440460|ref|ZP_07400349.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371212|gb|EFM24829.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 355 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 116/283 (40%), Positives = 174/283 (61%), Gaps = 11/283 (3%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLSGE--ADSNDAYLEVHAGAGGTE 129 EL E+ D +LQ D+++ I+ E+E ++ + LL + D+ + +E+ AGAGG E Sbjct: 63 ELLTEDLDDDMLQLVKDDIKNIEQELEKVTEELKRLLVPKDPNDNKNVIVEIRAGAGGDE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +LLR Y +AEK FKT+ + ++ G K +I+G AY LK E GVHR Sbjct: 123 AALFAGVLLRQYLMYAEKCGFKTDIMSTNEIGIGGYKEVVFMIEGKGAYSKLKYESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S+ R HTS +++ V P +D +EIEI SD R+D +R+SG GGQ VNTTDSA Sbjct: 183 VQRVPETESSGRIHTSTATVAVLPEAED-VEIEIDPSDIRVDVFRSSGNGGQSVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+V+ CQ E+SQ KNK +A +L+ KLY+LELQK+ + + +++IG G Sbjct: 242 VRITHLPTGIVISCQDEKSQLKNKEKAMKILKTKLYDLELQKQAQ--ELSAEKRSQIGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + + +GDLD+ + A Sbjct: 300 DRSERIRTYNY-PQGRVTDHRIGLTSHRIDAINNGDLDEIIDA 341 >gi|260589191|ref|ZP_05855104.1| peptide chain release factor 1 [Blautia hansenii DSM 20583] gi|260540272|gb|EEX20841.1| peptide chain release factor 1 [Blautia hansenii DSM 20583] Length = 358 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 126/357 (35%), Positives = 209/357 (58%), Gaps = 22/357 (6%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68 +FD ++ + RL + + +P + + + LM+E+ Q + +A + K ++ + D Sbjct: 1 MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124 +L++L+ +E+ +L +E SD +RI+ E +Q +L D ND +E+ AG Sbjct: 61 SLMMLDEESDEEMREMLKEELSDAKKRIE---ELEQELKILLLPKDPNDDKNVIVEIRAG 117 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A + RMY ++AE + ++TE L +++ G K T +I G AY LK E Sbjct: 118 AGGDEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYE 177 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS ++ + P ++ I+ E+ +DC+ D +RASG GGQ VN Sbjct: 178 SGVHRVQRVPETESGGRIHTSTITVAIMPEAEE-IDFELDLNDCKFDVFRASGNGGQCVN 236 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LY++ELQKR + E+ ++ Sbjct: 237 TTDSAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHDAE--AEARRS 294 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD----LDDFMKATLAIK 354 ++G G +IR+Y P V D R + +++GD +D+ + A AI+ Sbjct: 295 QVGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDIQEIIDNLIAADQAIR 350 >gi|88657945|ref|YP_507408.1| peptide chain release factor 1 [Ehrlichia chaffeensis str. Arkansas] gi|119361539|sp|Q2GGM5|RF1_EHRCR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|88599402|gb|ABD44871.1| peptide chain release factor 1 [Ehrlichia chaffeensis str. Arkansas] Length = 359 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 112/260 (43%), Positives = 168/260 (64%), Gaps = 9/260 (3%) Query: 98 EVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 +V++K SLL + D + +A LE+ AG GG E+ + L RMYT++AE++ +K E + Sbjct: 92 KVKHKLKLSLLPKDKDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQIN 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 G K +L I G N + LK E GVHR+ R+ +++ R HTS +++ V P ++ Sbjct: 152 SSSTGIGGHKEISLCISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + ++++I E D RID YR+SG GGQ VNTTDSAVRITHIP+G+VV Q E+SQHKNK++A Sbjct: 212 E-VDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKA 270 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY LE QKR+ A I + K++IG G +IR+Y P + D R N+ Sbjct: 271 LKVLRARLYNLEKQKRD--AEISQMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLY 327 Query: 334 SPSDVL-DGDLDDFMKATLA 352 D++ +G+LD+F++A +A Sbjct: 328 RLDDIMKEGNLDEFIEALIA 347 >gi|295109135|emb|CBL23088.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus obeum A2-162] Length = 358 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 120/328 (36%), Positives = 192/328 (58%), Gaps = 11/328 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLILLELALEEDDCSIL-QE 87 +P + N + LM+E+ L + KE ++ + D+L +LE +E+ +L +E Sbjct: 21 EPGVTDNQDRFQKLMKEQSELQPIVDTYKEYKENKETIQDSLSMLEEEKDEEMREMLKEE 80 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 SD +R++ + + L DS + +E+ AGAGG E+ +A + RMY ++AE Sbjct: 81 LSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGGDEAALFAAEIYRMYVKYAES 140 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R++KTE + +++ G K T +I+G AY LK E GVHR+ R+ +S R HTS Sbjct: 141 RRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGVHRVQRVPETESGGRIHTSTC 200 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ + P ++ I+ + +DC+ D +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+ Sbjct: 201 TVAIMPEAEE-IDFHLDMNDCKFDVFRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEK 259 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQ KNK +A +LR++LYE+EL K+ + E+ +++IG G +IR+Y P V Sbjct: 260 SQLKNKDKALKVLRSRLYEMELAKQHDAE--AEARRSQIGTGDRSEKIRTYNF-PQGRVT 316 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R + +L GDLD+ + + +A Sbjct: 317 DHRIKLTLHRLDAILGGDLDEILDSLIA 344 >gi|304410657|ref|ZP_07392275.1| peptide chain release factor 1 [Shewanella baltica OS183] gi|304351141|gb|EFM15541.1| peptide chain release factor 1 [Shewanella baltica OS183] Length = 363 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 115/310 (37%), Positives = 182/310 (58%), Gaps = 7/310 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L++ ++ K Q D E+ LEEDD + + + ++ K ++E+ Sbjct: 36 RALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM-LEEDDAEMREMAQEEMKAAKAKLEHL 94 Query: 103 QFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E LL + D + +A++E+ AGAGG E+ +A L RMY+R+AE +++ E + + Sbjct: 95 EDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K + + G YG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA + Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ LE +KR S G ++R+Y P V + R N+ ++ Sbjct: 275 VLAARIQALEDEKRRSAEETTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333 Query: 338 VLDGDLDDFM 347 V++GDLD + Sbjct: 334 VMEGDLDAIL 343 >gi|84394465|ref|ZP_00993179.1| peptide chain release factor 1 [Vibrio splendidus 12B01] gi|84374906|gb|EAP91839.1| peptide chain release factor 1 [Vibrio splendidus 12B01] Length = 362 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 125/346 (36%), Positives = 188/346 (54%), Gaps = 11/346 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L + V+R + DP + N + + L +E L+ K Q + ++L Sbjct: 6 LIKLETLVERYEEVQHLLGDPGVLGNQDKFRALSKEYSQLEEVTGCFKSYQ-QAQEDLEA 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E EDD + + + ++ K +E E +L D ND +LE+ AGAGG Sbjct: 65 AEEMANEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAGAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+R+AEK+ ++ E + + E+ G K I G YG +K E G H Sbjct: 125 EAGIFAGNLFRMYSRFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFESGGH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ V P + ++ EI D +IDT+RASGAGGQHVNTTDS Sbjct: 185 RVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R A I ++ + +G Sbjct: 245 AIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAAISDTRRNLLGS 302 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R N+ ++VL+GD+ + L Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVL 347 >gi|323452428|gb|EGB08302.1| hypothetical protein AURANDRAFT_13671 [Aureococcus anophagefferens] Length = 235 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 101/233 (43%), Positives = 149/233 (63%), Gaps = 9/233 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + E+ ++G D D LE+ AGAGG ++Q+W M+ RMY R+ EKR F E +G+ Sbjct: 1 ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60 Query: 163 AG-IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIE 220 G +K +L I+G NA+G +GE+G HRLVR SP++S ++R TSF+S+ P + DD + Sbjct: 61 PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120 Query: 221 I-----EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + E+ +D + T RA GAGGQ+VN ++AVR+TH+PTG+ V+C +ER+Q NKA Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRVTHVPTGLRVRCARERTQGANKAI 180 Query: 276 AWNMLRAKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 A MLRAKL + Q+ +A+I + +G +RSYVL PY++VKD R Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADI-RGDRVAADFGASVRSYVLHPYKLVKDDR 232 >gi|315127042|ref|YP_004069045.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913] gi|315015556|gb|ADT68894.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913] Length = 361 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 106/234 (45%), Positives = 149/234 (63%), Gaps = 6/234 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N+ +LEV AG GG E+ +A L RMY+R+AE +K+K E + ++GE G K I Sbjct: 109 DNNNVFLEVRAGTGGDEAAIFAGDLFRMYSRYAETKKWKVEVVTTNEGEHGGYKEVIANI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ +S R HTS ++ V V ++ IEI+ +D ++DT Sbjct: 169 SGEGVYGQLKFESGVHRVQRVPETESQGRVHTSACTVAVMAEVPEAEAIEINTADIKVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKN+A+A ++L A+L + E +KR Sbjct: 229 FRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKR 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 A + +G G +IR+Y P + D R N+ ++V+ GDL Sbjct: 289 H--AAEASERRNLVGSGDRSERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDL 339 >gi|219856616|ref|YP_002473738.1| hypothetical protein CKR_3273 [Clostridium kluyveri NBRC 12016] gi|219570340|dbj|BAH08324.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 367 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 125/347 (36%), Positives = 199/347 (57%), Gaps = 18/347 (5%) Query: 20 VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 ++RL+F+ K E DP + + + + L +E L+ + +E ++ L D Sbjct: 12 LERLNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLEDN 71 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E+ EE D + + + ++R+ +E ++ E +L D ND ++E+ GAGG Sbjct: 72 KEMLREETDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGAGGE 131 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYTR+AE + +K E + + + G K ++KG +AY LK E G H Sbjct: 132 EAALFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYESGTH 191 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ V P VDD ++I ++++D RID +RASG GGQ VNTTDS Sbjct: 192 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDIVVNQNDIRIDVFRASGHGGQCVNTTDS 250 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+SQ KNK +A +L+++LYE ++R A+I E K ++G Sbjct: 251 AVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERN--ASIAEDRKNQVGT 308 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R + L+GD+D+ + A + Sbjct: 309 GDRSERIRTYNY-PQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALIT 354 >gi|217967194|ref|YP_002352700.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724] gi|226739103|sp|B8E003|RF1_DICTD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|217336293|gb|ACK42086.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724] Length = 367 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 118/310 (38%), Positives = 180/310 (58%), Gaps = 11/310 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L++ER ++ + +E + L + L E+ EE D + L+ I+ ++E +F Sbjct: 39 LLKERAKIEEIVDKFREYKRLLKEKEDLEEMVKEEQDEDLRSLAETELEDIQEKLEKVEF 98 Query: 105 E-SLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E L D ND +E+ AG GG E+ +A L RMY +A+K+ +K E + + Sbjct: 99 ELKALLLPKDPNDEKNIIMEIRAGTGGEEAALFAADLFRMYLGYAQKKGWKVEIVSSNPT 158 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 G K +++G AY LK E GVHR+ R+ +S+ R HTS +++ V P +++ IE Sbjct: 159 GLGGFKEIIFIVEGKGAYSRLKFESGVHRVQRVPITESSGRIHTSTATVAVLPEMEE-IE 217 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI D RI+T+R+ GAGGQHVN T+S VRITHIP+G+VVQCQ ERSQH+N+ +A +L Sbjct: 218 VEIDPKDLRIETFRSGGAGGQHVNKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVL 277 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 RA+LY E +RE+ I + ++G G +IR+Y P + V D R N + Sbjct: 278 RARLY--EYYQREKENEIASQRRQQVGTGERSEKIRTYNF-PQRRVTDHRINYSSFQLEE 334 Query: 338 VLDGDLDDFM 347 VL G+LD+F+ Sbjct: 335 VLSGELDEFI 344 >gi|330961728|gb|EGH61988.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 360 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 123/315 (39%), Positives = 187/315 (59%), Gaps = 24/315 (7%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K L++ + L+ A + +K+ + + E+A+EE ++ET + L + LE + + Sbjct: 53 KQLLKVQADLEGAQALLKD------SDPDMREMAVEE-----VRETKEQL--VDLEAQLQ 99 Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 100 RM--LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P D+ I Sbjct: 158 HGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAI 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLS 277 Query: 282 AKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 AKL + Q+ AN I K +G G +IR+Y P V D R N+ S + Sbjct: 278 AKLND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDE 333 Query: 338 VLDGDLDDFMKATLA 352 VL G +D ++ LA Sbjct: 334 VLAGGVDAVIEPLLA 348 >gi|153956299|ref|YP_001397064.1| peptide chain release factor 1 [Clostridium kluyveri DSM 555] gi|189039965|sp|A5N3J7|RF1_CLOK5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146349157|gb|EDK35693.1| PrfA [Clostridium kluyveri DSM 555] Length = 357 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 125/347 (36%), Positives = 199/347 (57%), Gaps = 18/347 (5%) Query: 20 VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 ++RL+F+ K E DP + + + + L +E L+ + +E ++ L D Sbjct: 2 LERLNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLEDN 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E+ EE D + + + ++R+ +E ++ E +L D ND ++E+ GAGG Sbjct: 62 KEMLREETDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGAGGE 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYTR+AE + +K E + + + G K ++KG +AY LK E G H Sbjct: 122 EAALFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYESGTH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ V P VDD ++I ++++D RID +RASG GGQ VNTTDS Sbjct: 182 RVQRVPDTESSGRIHTSTATVAVLPEVDD-VDIVVNQNDIRIDVFRASGHGGQCVNTTDS 240 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+SQ KNK +A +L+++LYE ++R A+I E K ++G Sbjct: 241 AVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERN--ASIAEDRKNQVGT 298 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R + L+GD+D+ + A + Sbjct: 299 GDRSERIRTYNY-PQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALIT 344 >gi|170717669|ref|YP_001784745.1| peptide chain release factor 1 [Haemophilus somnus 2336] gi|189039976|sp|B0UUE6|RF1_HAES2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|168825798|gb|ACA31169.1| peptide chain release factor 1 [Haemophilus somnus 2336] Length = 360 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 117/292 (40%), Positives = 179/292 (61%), Gaps = 10/292 (3%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L +N+ +L L++ D + E + ++E +Q + LL + D ND AYLE+ Sbjct: 58 LNNNIEETQLLLDDPDMKEMAELEIEESKAEIENAEQQLQILLLPK-DPNDEYNAYLEIR 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLK 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS ++ V P + ++ EI+ SD RIDTYR+SGAGGQH Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQH 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E Q+R+ A ++ Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIAQAE-QERQAQAQ-ADTR 294 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +G G +IR+Y P V D R N+ +V++G +D+ ++ + Sbjct: 295 RNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|19704667|ref|NP_604229.1| peptide chain release factor 1 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|22096034|sp|Q8R5W0|RF1_FUSNN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|19714975|gb|AAL95528.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 365 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 104/244 (42%), Positives = 149/244 (61%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +A L RMY+R+AE++K+K E +E DGE G+K I Sbjct: 114 DDKNVIVEIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEIAFTI 173 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDT Sbjct: 174 IGLGAYSRLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDT 233 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+ GAGGQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 234 YRSGGAGGQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQ 293 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + ++G G +IR+Y P + D R + LDGD+D+ + A Sbjct: 294 R--SEVESERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDA 350 Query: 350 TLAI 353 + Sbjct: 351 LITF 354 >gi|312134918|ref|YP_004002256.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL] gi|311774969|gb|ADQ04456.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL] Length = 355 Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 126/338 (37%), Positives = 190/338 (56%), Gaps = 19/338 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI----LLELALEEDD 81 L K DP + E + LM+E +L + +E + R+ + + LL+ ++ED Sbjct: 15 LEKKIADPDIISQTQEWQKLMKEHSNLQPIVEKFREYK-RILNTIKEAEELLDTDIDEDF 73 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 +++E N + + E+ + + LL D + +E+ AGAGG E+ +A L R Sbjct: 74 EKLVKEEL-NWAKEQKEIVERDLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAELFR 132 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+R+AE++ +K E + + + G K +I G AY LK E GVHR+ R+ +S Sbjct: 133 MYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVTESG 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ V P V+D IE+EI E D IDT+RA GAGGQHVN T+SAVRI H PTG+ Sbjct: 193 GRIHTSTATVAVLPEVED-IEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPTGI 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQIRS 314 VV CQ ERSQH N+ +A +LRA+LY+ LQ++E I ++++G G +IR+ Sbjct: 252 VVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKE----IESQRRSQVGTGDRSERIRT 307 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 Y P V D R + VLDG+LD+ + A + Sbjct: 308 YNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALIT 344 >gi|113461093|ref|YP_719161.1| peptide chain release factor 1 [Haemophilus somnus 129PT] gi|119361547|sp|Q0I3B5|RF1_HAES1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|112823136|gb|ABI25225.1| bacterial peptide chain release factor 1 (bRF-1) [Haemophilus somnus 129PT] Length = 360 Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 117/292 (40%), Positives = 179/292 (61%), Gaps = 10/292 (3%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L +N+ +L L++ D + E + ++E +Q + LL + D ND AYLE+ Sbjct: 58 LNNNIEETQLLLDDPDMKEMAELEIEESKAEIENAEQQLQILLLPK-DPNDEYNAYLEIR 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK Sbjct: 117 AGTGGDEAGIFAGDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLK 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS ++ V P + ++ EI+ SD RIDTYR+SGAGGQH Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQH 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E Q+R+ A ++ Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALSVLASRIAQAE-QERQAQAQ-ADTR 294 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +G G +IR+Y P V D R N+ +V++G +D+ ++ + Sbjct: 295 RNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|168185914|ref|ZP_02620549.1| peptide chain release factor 1 [Clostridium botulinum C str. Eklund] gi|169296113|gb|EDS78246.1| peptide chain release factor 1 [Clostridium botulinum C str. Eklund] Length = 357 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 122/333 (36%), Positives = 192/333 (57%), Gaps = 11/333 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALEEDDC 82 L+ K DP + N E + L +E L+ ++ +E + + L N +L ++D Sbjct: 15 LSIKISDPSVMANQNEWRKLCKEHSELETIVTKYREYKGNKEELEANKEMLSEETDKDMK 74 Query: 83 SILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 ++QE L+ I + E + L D + ++E+ AGAGG E+ +A L RMY Sbjct: 75 EMIQEEIKTLEENIVTDEEELKILLLPKDPNDDKNVFIEIRAGAGGDEAALFAANLFRMY 134 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TR+AE+ +KTE + ++ + G K +++G +AY +K E GVHR+ R+ +S+ R Sbjct: 135 TRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESGVHRVQRVPDTESSGR 194 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P VDD ++I+I +D R+D +RASG GGQ VNTTDSAVR+THIPTG+VV Sbjct: 195 IHTSTATVAVLPEVDD-VDIQIDPNDIRVDVFRASGHGGQCVNTTDSAVRMTHIPTGIVV 253 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 CQ E+SQ KNK +A +L+A+LYE +R A+I K+++G G +IR+Y Sbjct: 254 SCQDEKSQLKNKEKAMKVLKARLYEKAEAERS--ASISADRKSQVGTGDRSERIRTYNY- 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V + R + LDGD+++ + A + Sbjct: 311 PQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALI 343 >gi|71281852|ref|YP_270226.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H] gi|119361527|sp|Q47Y94|RF1_COLP3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71147592|gb|AAZ28065.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H] Length = 362 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 117/337 (34%), Positives = 188/337 (55%), Gaps = 7/337 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V+R + DP + + + L +E + LD S + D+ EL L++ Sbjct: 13 VERFEEVQALLSDPATISDQEKFRALSKEFKQLDAVTSVFNNYKS-AEDDFSTAELMLKD 71 Query: 80 DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 DD + + + + K V + Q L D N+ ++E+ AGAGG E+ +A Sbjct: 72 DDPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAGAGGDEAAIFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AEK+ +K E + ++ E+ G K + + G +G +K E G HR+ R+ Sbjct: 132 DLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFESGGHRVQRVPA 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + ++ IEI+++D ++DT+RASGAGGQHVN TDSA+RITHI Sbjct: 192 TESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVNKTDSAIRITHI 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRS 314 PTGVVV+CQ++RSQHKN+AQA ++L+A+L + E +KR + G +IR+ Sbjct: 252 PTGVVVECQEQRSQHKNRAQAMSVLQARLQQAEDEKRRSEEESSRRNLVASGDRSERIRT 311 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y P + D R N+ +++++G L M+ + Sbjct: 312 YNF-PQGRMSDHRINLTLYRLNEIMEGSLQLVMEPIM 347 >gi|213967224|ref|ZP_03395373.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1] gi|301381040|ref|ZP_07229458.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato Max13] gi|302060378|ref|ZP_07251919.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato K40] gi|302134868|ref|ZP_07260858.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928066|gb|EEB61612.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1] Length = 360 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 124/315 (39%), Positives = 186/315 (59%), Gaps = 24/315 (7%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K L R + L+ A + +K+ + + E+A+EE ++ET L ++LE + + Sbjct: 53 KQLARVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQ 99 Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 100 RM--LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P D+ I Sbjct: 158 HGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAI 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLS 277 Query: 282 AKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 AKL + Q+ AN I K +G G +IR+Y P V D R N+ S + Sbjct: 278 AKLND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDE 333 Query: 338 VLDGDLDDFMKATLA 352 VL G +D ++ LA Sbjct: 334 VLAGGVDAVIEPLLA 348 >gi|300853434|ref|YP_003778418.1| peptide chain release factor 1 [Clostridium ljungdahlii DSM 13528] gi|300433549|gb|ADK13316.1| peptide chain release factor 1 (RF-1) [Clostridium ljungdahlii DSM 13528] Length = 357 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 127/350 (36%), Positives = 200/350 (57%), Gaps = 24/350 (6%) Query: 20 VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDN 69 ++RL+F+ K E DP + + E + L +E L+ ++ +E Q L DN Sbjct: 2 LERLNFIENKYEELSIKISDPQVMADQKEWQKLCKENAELEEIVTKYREYKKAQQELEDN 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGA 125 +L+ EE D + + + ++R+ +E + + +L D ND ++E+ AGA Sbjct: 62 KEMLK---EETDREMKEMEQEEIKRLTEVIEESENDLRVLLLPKDPNDDKNVFVEIRAGA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMYTR+AE++ + E + I+ + G K ++KG AY LK E Sbjct: 119 GGEEAALFAANLTRMYTRYAERQAWNIETMSINATDIGGFKEIVFMVKGKGAYSRLKYES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S+ R HTS +++ V P VDD +++ I+ +D RID +RASG GGQ VNT Sbjct: 179 GTHRVQRVPDTESSGRIHTSTATVAVLPEVDD-VDVVINPNDIRIDVFRASGHGGQCVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV CQ E+SQ KNK + +L+++LY E ++E A+I E K++ Sbjct: 238 TDSAVRITHLPTGLVVSCQDEKSQLKNKEKGMKVLKSRLY--ERAEKERSASIAEDRKSQ 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G G +IR+Y P V D R + LDG++D+ + A + Sbjct: 296 VGTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSFLDGNIDEIIDALIT 344 >gi|157363244|ref|YP_001470011.1| peptide chain release factor 1 [Thermotoga lettingae TMO] gi|157313848|gb|ABV32947.1| peptide chain release factor 1 [Thermotoga lettingae TMO] Length = 347 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 107/256 (41%), Positives = 155/256 (60%), Gaps = 14/256 (5%) Query: 102 KQFESLLS-------GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 KQ+E ++S + N+ E+ AG GG E+ +A L RMY R+AE++ ++ E Sbjct: 82 KQYEDIISQLISHLLPFEEHNNVIFEIRAGTGGEEAALFAADLYRMYIRYAERKGWQVEL 141 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 + HD G K +KG +AY +LK E GVHR+ R+ +S+ R HTS +++ V P Sbjct: 142 SDFHDTGLGGFKEIVFFVKGKSAYKYLKYESGVHRVQRVPVTESSGRIHTSTATVAVLPE 201 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 V D +EI I D +IDT++ASG GGQ+VN T+SAVRITH+PTG++V CQ ERSQH+N+ Sbjct: 202 VSD-VEIHIDPKDLKIDTFKASGHGGQYVNKTESAVRITHLPTGIIVSCQSERSQHQNRE 260 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A +LRAKLYE+E +K + + K +IG +IR+Y P V D R N Sbjct: 261 RALVILRAKLYEIEQEKIN--SQLSNQRKNQIGSAERSEKIRTYNF-PQNRVTDHRINYT 317 Query: 332 KTSPSDVLDGDLDDFM 347 ++LDGDLD+ + Sbjct: 318 TYRLQEILDGDLDELI 333 >gi|49475009|ref|YP_033050.1| peptide chain release factor 1 [Bartonella henselae str. Houston-1] gi|61214620|sp|Q6G5T7|RF1_BARHE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|49237814|emb|CAF27009.1| Peptide chain release factor 1 [Bartonella henselae str. Houston-1] Length = 359 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 110/244 (45%), Positives = 153/244 (62%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A +E+ AG GG+E+ +A L RMY R+A R +K E + +++GE G K Sbjct: 107 ADEKSAIVEIRAGTGGSEAALFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ RI ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ISGRGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E S K+++G G +IR+Y P V D R N+ VL+GDLD+ + Sbjct: 285 AEN--ERSASRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVLEGDLDELIH 341 Query: 349 ATLA 352 A ++ Sbjct: 342 ALIS 345 >gi|163750755|ref|ZP_02157990.1| peptide chain release factor 1 [Shewanella benthica KT99] gi|161329450|gb|EDQ00444.1| peptide chain release factor 1 [Shewanella benthica KT99] Length = 361 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 120/343 (34%), Positives = 196/343 (57%), Gaps = 20/343 (5%) Query: 17 DNAVQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 D+ +++L L + E DP + + + L +E L++ ++ K Q + ++ Sbjct: 3 DSVIRKLEGLLERNEEVLALLSDPGIIADQTRFRALSKEYSQLEDVVAAFKGFQ-QATED 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAG 124 L + L E+D I Q + ++ K LE E Q L D N+A++E+ AG Sbjct: 62 LDAAKEMLSENDPEIKQMAQEEMKEAKSLIKKLEDEL-QILLLPKDPNDDNNAFVEIRAG 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L RMY+R+ E +++TE + ++GE G K + + G YG LK E Sbjct: 121 AGGDEAAIFAGDLYRMYSRYFESNRWQTEIMNANEGEHGGFKEIIIKVSGEGVYGRLKFE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS ++ V V ++ I+I+ +D ++DT+RASGAGGQHVN Sbjct: 181 SGGHRVQRVPETESQGRVHTSACTVAVLVEVPEAEAIKINPADLKVDTFRASGAGGQHVN 240 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSA+R+THIP+G+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + + + Sbjct: 241 KTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSVEET--TRRN 298 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +G G +IR+Y P V D R N+ +++++G+LD Sbjct: 299 LVGSGDRSERIRTYNY-PQGRVSDHRINLTLYRLNEIMEGELD 340 >gi|289577389|ref|YP_003476016.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9] gi|289527102|gb|ADD01454.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9] Length = 356 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 105/242 (43%), Positives = 157/242 (64%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A+ L RMY+ +AEK+ +K E + ++ + G K L I Sbjct: 105 DEKNVIMEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ ++ R HTS +++ V P V++ +++EI+ +D RID Sbjct: 165 SGKGAYSRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEE-VDVEINPNDIRIDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+ G GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ++ Sbjct: 224 FRSGGHGGQSVNTTDSAVRVTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQ 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ I E+ K+++G G +IR+Y P V D R + +VLDGDLD+ + A Sbjct: 284 QK--EIAEARKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDA 340 Query: 350 TL 351 + Sbjct: 341 LI 342 >gi|57239178|ref|YP_180314.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Welgevonden] gi|58579136|ref|YP_197348.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Welgevonden] gi|58617189|ref|YP_196388.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Gardel] gi|75432752|sp|Q5FGZ2|RF1_EHRRG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|81557311|sp|Q5HB80|RF1_EHRRW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|57161257|emb|CAH58178.1| peptide release factor 1 [Ehrlichia ruminantium str. Welgevonden] gi|58416801|emb|CAI27914.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str. Gardel] gi|58417762|emb|CAI26966.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str. Welgevonden] Length = 359 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 113/266 (42%), Positives = 169/266 (63%), Gaps = 9/266 (3%) Query: 92 LQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 LQ+ +V++K SLL + D + +A LE+ AG GG E+ + L RMY ++AEK+ + Sbjct: 86 LQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGTGGEEAALFVTDLYRMYIKYAEKKNW 145 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E + G K +L + G N + LK E GVHR+ R+ +++ R HTS +++ Sbjct: 146 KIEQINSSSTGIGGHKEVSLCVSGSNVFAKLKFESGVHRVQRVPETEASGRLHTSAATVA 205 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +++ ++++I E D RID YR+SG GGQ VNTTDSAVRITHIP+G+VV Q E+SQH Sbjct: 206 VLPEIEE-VDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQH 264 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327 KNK +A +LRA+LY+LE QKR+ A I + K++IG G +IR+Y P + D R Sbjct: 265 KNKNKALKVLRARLYDLEKQKRD--AEISQLRKSQIGSGDRSERIRTYNF-PQSRITDHR 321 Query: 328 TNIEKTSPSDVL-DGDLDDFMKATLA 352 N+ D++ +GDLD+ ++A +A Sbjct: 322 INLTLYRLEDIMKEGDLDELIEALIA 347 >gi|257467857|ref|ZP_05631953.1| peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185] gi|317062146|ref|ZP_07926631.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185] gi|313687822|gb|EFS24657.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185] Length = 358 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 105/246 (42%), Positives = 149/246 (60%), Gaps = 6/246 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D + +E+ GAGG E+ +A L RMY+R+AE++K+K E +E + GIK A Sbjct: 104 ENDDKNVIIEIRGGAGGDEAALFAGNLFRMYSRYAERKKWKMEIIEKQEMGIGGIKEAVF 163 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY LK E GVHR+ R+ +S R HTS +++ V P V+D E++I D +I Sbjct: 164 SINGFGAYSRLKFESGVHRVQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKI 223 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYR+ GAGGQHVN TDSAVRITH+PTG++VQCQ ERSQ KN+ +A L +KL+E+E + Sbjct: 224 DTYRSGGAGGQHVNMTDSAVRITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECE 283 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K+ + + + ++G G +IR+Y P + D R LDGDLD+ + Sbjct: 284 KQR--SQVESERRLQVGTGDRSEKIRTYNY-PQGRITDHRIKFTVYQLEAYLDGDLDEMI 340 Query: 348 KATLAI 353 A + Sbjct: 341 DALITF 346 >gi|163858862|ref|YP_001633160.1| peptide chain release factor 1 [Bordetella petrii DSM 12804] gi|229470349|sp|A9IER8|RF1_BORPD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|163262590|emb|CAP44893.1| peptide chain release factor 1 [Bordetella petrii] Length = 360 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 124/337 (36%), Positives = 185/337 (54%), Gaps = 11/337 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL ++ +P ++ + L RER L+ + + R D+L + L + D Sbjct: 15 RLIEVDALLAEPDTAADMERFRKLSRERAELEPVVQAFAQFA-RTEDDLATAQEMLADPD 73 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLL 138 + E R +LE + + LL D ND +LE+ AG GG ES ++ LL Sbjct: 74 MKAMAEDEIKTGRERLEKLESELQVLLLPR-DPNDGRSLFLEIRAGTGGDESALFSGDLL 132 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY+R+AE+R ++ E + E G K I G AYG LK E G HR+ R+ ++ Sbjct: 133 RMYSRYAEQRGWRVELMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVPATEA 192 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ V P D +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH+PTG Sbjct: 193 QGRIHTSACTVAVMPEADAMSDIVINPADLRIDTFRASGAGGQHINKTDSAVRITHLPTG 252 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VV+CQ +RSQH+NK +A +L A+L + EL++R+ + K+ +G G +IR+Y Sbjct: 253 LVVECQDDRSQHRNKDKAMQVLAARLKDRELRERQ--SKEAAERKSLVGSGDRSERIRTY 310 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R N+ +++GDL++ A +A Sbjct: 311 NF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIA 346 >gi|114561906|ref|YP_749419.1| peptide chain release factor 1 [Shewanella frigidimarina NCIMB 400] gi|119361604|sp|Q087I4|RF1_SHEFN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114333199|gb|ABI70581.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella frigidimarina NCIMB 400] Length = 361 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 118/305 (38%), Positives = 178/305 (58%), Gaps = 7/305 (2%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYK 102 L +E L++ +S K Q D E+ LEEDD + + D ++ K LE Sbjct: 38 LSKEYSQLEDVVSSFKAFQQAQKDFDYAKEM-LEEDDLEMREMAQDEYKQSKQVLEKLED 96 Query: 103 QFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 + + LL + D +A+LE+ AGAGG E+ +A L RMY+R+ E +++ E + +++G Sbjct: 97 ELQVLLLPTDPNDDTNAFLEIRAGAGGDEAAIFAGDLYRMYSRYCEANRWQMEVMNVNEG 156 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G K + I G AYG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 157 EHGGFKEIIVKISGDGAYGKLKFESGGHRVQRVPETESQGRVHTSACTVVVLHEVPEAEA 216 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I I+ +D ++DT+RASGAGGQHVN TDSA+RITHIP+G++V+CQ +RSQHKN+AQA ++L Sbjct: 217 ISINAADLKVDTFRASGAGGQHVNKTDSAIRITHIPSGIIVECQDQRSQHKNRAQAMSVL 276 Query: 281 RAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 A++ +E +KR S G +IR+Y P V D R N+ ++V+ Sbjct: 277 AARIQAVEDEKRRSAEETTRRSLVASGDRSERIRTYNY-PQGRVSDHRINLTLYRLNEVM 335 Query: 340 DGDLD 344 +GDL+ Sbjct: 336 EGDLN 340 >gi|89073091|ref|ZP_01159630.1| peptide chain release factor 1 [Photobacterium sp. SKA34] gi|89051044|gb|EAR56501.1| peptide chain release factor 1 [Photobacterium sp. SKA34] Length = 362 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 122/346 (35%), Positives = 192/346 (55%), Gaps = 11/346 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L + V+R + DP + + + L +E L+ + Q + ++L+ Sbjct: 6 LVKLETLVERYEEVQHLLGDPSVLADQNRFRALSKEYSQLEEVTKCFQAYQ-QAKEDLVA 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E +EDD + + + ++ K E+E E +L D ND ++E+ AGAGG Sbjct: 65 AEEMAQEDDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAGAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+++AE+R ++ E + + E+ G K + G AYG LK E G H Sbjct: 125 EAGIFAGDLFRMYSKYAERRGWRIEIINENRSEQGGYKEMIAKVNGDGAYGILKFESGGH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDS Sbjct: 185 RVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLRIDTFRSSGAGGQHVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR A + + +G Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRN--AEEASTRRNLLGS 302 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + ++V++GDLD ++ Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQPVF 347 >gi|302186444|ref|ZP_07263117.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae 642] Length = 360 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 123/313 (39%), Positives = 186/313 (59%), Gaps = 24/313 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L+R + L+ A + +K+ + + E+A+EE ++ET L ++LE + ++ Sbjct: 55 LLRVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQRM 101 Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 102 --LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHG 159 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P D+ IEI Sbjct: 160 GYKEVIARVEGESVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEI 219 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 + +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L AK Sbjct: 220 NPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAK 279 Query: 284 LYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L + Q+ AN I K +G G +IR+Y P V D R N+ S +VL Sbjct: 280 LND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVL 335 Query: 340 DGDLDDFMKATLA 352 G +D ++ LA Sbjct: 336 AGGVDAVIEPLLA 348 >gi|118498113|ref|YP_899163.1| peptide chain release factor 1 [Francisella tularensis subsp. novicida U112] gi|194323340|ref|ZP_03057124.1| peptide chain release factor 1 [Francisella tularensis subsp. novicida FTE] gi|166223559|sp|A0Q844|RF1_FRATN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118424019|gb|ABK90409.1| protein chain release factor A [Francisella novicida U112] gi|194322704|gb|EDX20184.1| peptide chain release factor 1 [Francisella tularensis subsp. novicida FTE] Length = 361 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 118/311 (37%), Positives = 178/311 (57%), Gaps = 11/311 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L +E HL+ + KE L D E+ L E D +++ + L+ +E + Sbjct: 38 LSKEYSHLEPIVKAFKEYTQALEDKQAAYEM-LNEKDAELVEMAKEELKLANEAIEKLES 96 Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E +L D ND +LE+ AG GG E+ ++ L +MY+++AE+R +K E + +G Sbjct: 97 ELQILLLPRDPNDDANVFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEG 156 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A ML Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMLML 276 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 ++KL + E+ K+++ ++ K+ +G G +IR+Y P V D R N+ + Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333 Query: 338 VLDGDLDDFMK 348 V++G LD ++ Sbjct: 334 VMEGSLDSIIQ 344 >gi|241667853|ref|ZP_04755431.1| peptide chain release factor 1 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876395|ref|ZP_05249105.1| peptide chain release factor [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842416|gb|EET20830.1| peptide chain release factor [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 361 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 118/314 (37%), Positives = 179/314 (57%), Gaps = 11/314 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L +E HL+ + KE L D E+ L E D +++ + L+ +E + Sbjct: 38 LSKEYSHLEPIVKAFKEYTQALEDKEAAYEM-LNEKDAELVEMAKEELKSANESIERLED 96 Query: 105 E-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E +L D ND +LE+ AG GG E+ ++ L +MY+++AE+R +K E + +G Sbjct: 97 ELQILLLPRDPNDDANIFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEG 156 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 ++KL + E+ K+++ ++ K +G G +IR+Y P V D R N+ + Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKNLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333 Query: 338 VLDGDLDDFMKATL 351 V++G LD ++ + Sbjct: 334 VMEGSLDSIIQPLI 347 >gi|68171785|ref|ZP_00545129.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa] gi|67998796|gb|EAM85504.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa] Length = 311 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 112/260 (43%), Positives = 168/260 (64%), Gaps = 9/260 (3%) Query: 98 EVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 +V++K SLL + D + +A LE+ AG GG E+ + L RMYT++AE++ +K E + Sbjct: 44 KVKHKLKLSLLPKDKDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQIN 103 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 G K +L I G N + LK E GVHR+ R+ +++ R HTS +++ V P ++ Sbjct: 104 SSSTGIGGHKEISLCISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIE 163 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + ++++I E D RID YR+SG GGQ VNTTDSAVRITHIP+G+VV Q E+SQHKNK++A Sbjct: 164 E-VDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKA 222 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY LE QKR+ A I + K++IG G +IR+Y P + D R N+ Sbjct: 223 LKVLRARLYNLEKQKRD--AEISQMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLY 279 Query: 334 SPSDVL-DGDLDDFMKATLA 352 D++ +G+LD+F++A +A Sbjct: 280 RLDDIMKEGNLDEFIEALIA 299 >gi|325578168|ref|ZP_08148303.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC 33392] gi|325159904|gb|EGC72033.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC 33392] Length = 360 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 114/294 (38%), Positives = 178/294 (60%), Gaps = 10/294 (3%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLE 120 ++L N+ EL L++ + + E + ++E +Q + LL + D ND YLE Sbjct: 56 NQLNSNIAEAELMLDDPEMKEMAEMEIEESKAEIEEVEQQLQILLLPK-DPNDEYNCYLE 114 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + G YG Sbjct: 115 IRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQ 174 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGG Sbjct: 175 LKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGG 234 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ + A + Sbjct: 235 QHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER--QAAEQAD 292 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + +G G +IR+Y P V D R N+ +V++G +D+ ++ + Sbjct: 293 TRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTLYRLDEVMNGKIDELIQPII 345 >gi|307304754|ref|ZP_07584504.1| peptide chain release factor 1 [Shewanella baltica BA175] gi|306912156|gb|EFN42580.1| peptide chain release factor 1 [Shewanella baltica BA175] Length = 363 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 115/310 (37%), Positives = 182/310 (58%), Gaps = 7/310 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L++ ++ K Q D E+ LEEDD + + + ++ K ++E+ Sbjct: 36 RALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM-LEEDDAEMREMAQEEMKAAKAKLEHL 94 Query: 103 QFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E LL + D + +A++E+ AGAGG E+ +A L RMY+R+AE +++ E + + Sbjct: 95 EDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K + + G YG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA + Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ LE +KR S G ++R+Y P V + R N+ ++ Sbjct: 275 VLAARIQALEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333 Query: 338 VLDGDLDDFM 347 V++GDLD + Sbjct: 334 VMEGDLDAIL 343 >gi|238783270|ref|ZP_04627295.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970] gi|238715863|gb|EEQ07850.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970] Length = 360 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 105/237 (44%), Positives = 149/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K + Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A+G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGEGAFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 Q----LAEASERRNLLGTGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|126172944|ref|YP_001049093.1| peptide chain release factor 1 [Shewanella baltica OS155] gi|217974700|ref|YP_002359451.1| peptide chain release factor 1 [Shewanella baltica OS223] gi|166223601|sp|A3D0G1|RF1_SHEB5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790896|sp|B8E815|RF1_SHEB2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|125996149|gb|ABN60224.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella baltica OS155] gi|217499835|gb|ACK48028.1| peptide chain release factor 1 [Shewanella baltica OS223] Length = 363 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 115/310 (37%), Positives = 182/310 (58%), Gaps = 7/310 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L++ ++ K Q D E+ LEEDD + + + ++ K ++E+ Sbjct: 36 RALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM-LEEDDAEMREMAQEEMKAAKAKLEHL 94 Query: 103 QFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E LL + D + +A++E+ AGAGG E+ +A L RMY+R+AE +++ E + + Sbjct: 95 EDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K + + G YG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA + Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ LE +KR S G ++R+Y P V + R N+ ++ Sbjct: 275 VLAARIQALEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333 Query: 338 VLDGDLDDFM 347 V++GDLD + Sbjct: 334 VMEGDLDAIL 343 >gi|257066246|ref|YP_003152502.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548] gi|256798126|gb|ACV28781.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548] Length = 358 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 124/334 (37%), Positives = 188/334 (56%), Gaps = 11/334 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K DP + ++ + + RE L + EI+D EL E DD ++ Sbjct: 15 LEKKMIDPDVLADISKLTKITREYNSLKPIVEKYDEIKDSESTIAENKELIGEADDQDMV 74 Query: 86 QETSDNL-QRIKLEVEYKQFESLL---SGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + D + + KL +YK+ +L DS D +E+ GAGG E+ +A L RMY Sbjct: 75 EMLKDEIKENEKLLEKYKEEMKILLIPKDPNDSRDVIVEIRPGAGGDEAGLFAGDLYRMY 134 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 +A+K +KTE +E+ GIK AT +I+G AY K E GVHR+ R+ +S R Sbjct: 135 HMYADKEGYKTEDVEVSSQGVGGIKEATFMIRGEGAYSRFKYESGVHRVQRVPETESGGR 194 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P VD+ +++E+ +D R D +R+SG GGQ VNTTDSAVR+THIPTG+VV Sbjct: 195 IHTSTATVAVLPEVDE-VDVELDPNDIRTDVFRSSGNGGQSVNTTDSAVRLTHIPTGIVV 253 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 Q E+SQ KNK +A +L A++YELE +KR + I ++ K+++G G +IR+Y Sbjct: 254 SMQDEKSQIKNKEKAMKILLARIYELEEEKRNK--EIADNRKSQVGTGDRSERIRTYNF- 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P + D R N D L+G++ + + + +A Sbjct: 311 PQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIA 344 >gi|257462414|ref|ZP_05626828.1| peptide chain release factor 1 [Fusobacterium sp. D12] gi|317060078|ref|ZP_07924563.1| peptide chain release factor 1 [Fusobacterium sp. D12] gi|313685754|gb|EFS22589.1| peptide chain release factor 1 [Fusobacterium sp. D12] Length = 359 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 111/246 (45%), Positives = 152/246 (61%), Gaps = 9/246 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLL 171 D N+ +E+ GAGG E+ +A L RMY R+AE++K+K E +E D E G+K Sbjct: 106 DDNNVIVEIRGGAGGDEAAIFAGDLFRMYCRYAERKKWKVEIIEKQDLEGLDGLKEVAFS 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G AY LK E GVHR+ R+ +S R HTS +++ V P V+D E++I D +ID Sbjct: 166 IQGFGAYSKLKFESGVHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVQIDPKDLKID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+ GAGGQHVN TDSAVRITH+PTGV+VQCQ ERSQ KN+ +A L +KL E+E++K Sbjct: 226 TYRSGGAGGQHVNMTDSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEIEK 285 Query: 292 -REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 R EI GE + ++G G +IR+Y P + D R + LDGDLD+ + Sbjct: 286 QRSEIE--GE-RRLQVGTGDRAEKIRTYNF-PQGRITDHRIKLTVHQLEAFLDGDLDEMI 341 Query: 348 KATLAI 353 A + Sbjct: 342 DALITF 347 >gi|15896138|ref|NP_349487.1| peptide chain release factor 1 [Clostridium acetobutylicum ATCC 824] gi|20139340|sp|Q97F68|RF1_CLOAB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|15025931|gb|AAK80827.1|AE007785_12 Protein chain release factor A [Clostridium acetobutylicum ATCC 824] gi|325510292|gb|ADZ21928.1| peptide chain release factor 1 [Clostridium acetobutylicum EA 2018] Length = 359 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 122/346 (35%), Positives = 195/346 (56%), Gaps = 18/346 (5%) Query: 20 VQRLSF-------LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 ++RL F L+ K DP + N E + L +E ++N + +E + D Sbjct: 2 LERLEFIESKYDELSVKISDPSVMANQSEWQKLCKEHSEVENIVLKYREYKKAKEDLEAD 61 Query: 73 LELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGT 128 E+ ++ D + + + ++ + K V+Y++ ++ D ND+ ++E+ G GG Sbjct: 62 KEMLRDKIDAELKEMVEEEIKELEKSVVDYEEELRVMLLPKDPNDSKNVFVEIRGGTGGE 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYTR+AE++ + TE + ++ + G K ++KG AY +K E G H Sbjct: 122 EAALFAADLFRMYTRYAERQGWHTEVMSANETDIGGFKEIVFMVKGNGAYSRMKYESGTH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ V P VDD ++IEI+ +D RID +RASG GGQ VNTTDS Sbjct: 182 RVQRVPNTESSGRIHTSAATVAVLPEVDD-VDIEINPNDIRIDVFRASGHGGQCVNTTDS 240 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+ Q KNK +A +LRA+LYE +R A I E+ + ++G Sbjct: 241 AVRITHLPTGIVVSCQDEKRQLKNKEKAMKVLRARLYEKAEAERN--AGIAENRRNQVGS 298 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P + D R + LDGD+D+ + + Sbjct: 299 GDRSERIRTYNF-PQGRITDHRIGLTIYKLEQFLDGDIDEVINGLI 343 >gi|325294472|ref|YP_004280986.1| peptide chain release factor 1 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064920|gb|ADY72927.1| Peptide chain release factor 1 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 361 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 110/244 (45%), Positives = 155/244 (63%), Gaps = 9/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMYTR+AEK+ +K E L +++ GIK I Sbjct: 110 DEKNVILEIRAGTGGEEAALFAQDLFRMYTRYAEKKGWKVEILSLNETGLGGIKEVIATI 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ RI +S R HTS +++ + P ++ ++I I E D +IDT Sbjct: 170 SGKGAYSRLKYESGVHRVQRIPVTESGGRIHTSAATVAILPEAEE-VDIHIDEKDLKIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQK 291 YR+SGAGGQHVNTTDSAVRITHIPTG+VV C ERSQ +N+ +A +LRA+L EL E Q+ Sbjct: 229 YRSSGAGGQHVNTTDSAVRITHIPTGIVVTCSNERSQIQNRIKAMKILRARLKELYERQQ 288 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +E++ + + +++IG G +IR+Y P V D R + + + LDG+LD+ + Sbjct: 289 KEQLDS---ARRSQIGSGDRSEKIRTYNF-PENRVTDHRIKLTLYNLEEFLDGELDEMID 344 Query: 349 ATLA 352 A A Sbjct: 345 ALTA 348 >gi|330967416|gb|EGH67676.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 360 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 118/286 (41%), Positives = 174/286 (60%), Gaps = 18/286 (6%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 + E+A+EE ++ET L ++LE + ++ LL + D + +LE+ AG GG E+ Sbjct: 76 MREMAVEE-----VRETKQQL--VELEAQLQRM--LLPKDPNDGRNVFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ Sbjct: 127 AIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG 309 RITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q+ AN I K +G G Sbjct: 247 RITHLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSG 303 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ S +VL G +D ++ LA Sbjct: 304 DRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348 >gi|253583342|ref|ZP_04860540.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725] gi|251833914|gb|EES62477.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725] Length = 358 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 104/246 (42%), Positives = 148/246 (60%), Gaps = 6/246 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D + +E+ GAGG E+ +A L RMY+R+AE++K+K E +E + GIK Sbjct: 104 ENDDKNVIIEIRGGAGGDEAALFAGNLFRMYSRYAERKKWKIEIIEKQEMGIGGIKEVVF 163 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY LK E GVHR+ R+ +S R HTS +++ V P V+D E++I D +I Sbjct: 164 SINGFGAYSRLKFESGVHRVQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKI 223 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYR+ GAGGQHVN TDSAVRITH+PTG++VQCQ ERSQ KN+ +A L +KL+E+E + Sbjct: 224 DTYRSGGAGGQHVNMTDSAVRITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECE 283 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K+ + + + ++G G +IR+Y P + D R LDGDLD+ + Sbjct: 284 KQR--SQVESERRLQVGTGDRSEKIRTYNF-PQGRITDHRIKFTVYQLEAFLDGDLDEMI 340 Query: 348 KATLAI 353 A + Sbjct: 341 DALITF 346 >gi|330899755|gb|EGH31174.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330941684|gb|EGH44459.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str. 1704B] Length = 360 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 123/313 (39%), Positives = 186/313 (59%), Gaps = 24/313 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L+R + L+ A + +K+ + + E+A+EE ++ET L ++LE + ++ Sbjct: 55 LLRVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQRM 101 Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 102 --LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHG 159 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P D+ IEI Sbjct: 160 GYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEI 219 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 + +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L AK Sbjct: 220 NPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAK 279 Query: 284 LYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L + Q+ AN I K +G G +IR+Y P V D R N+ S +VL Sbjct: 280 LND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVL 335 Query: 340 DGDLDDFMKATLA 352 G +D ++ LA Sbjct: 336 AGGVDAVIEPLLA 348 >gi|291541665|emb|CBL14775.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus bromii L2-63] Length = 357 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 122/348 (35%), Positives = 201/348 (57%), Gaps = 29/348 (8%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R S L+ + P + N E + +M+E + ++ + ++ ++ + E+D Sbjct: 10 KRYSELSERLYQPSVAGNPEEYQKIMKEIKSIEEIVLTYRKYKEAV---------QTEKD 60 Query: 81 DCSILQETSDN----LQRIKLEVEYKQFESL------LSGEADSND---AYLEVHAGAGG 127 IL+ETSD L +I+L+ ++L L D ND +E+ GAGG Sbjct: 61 SLEILEETSDKELKELAQIELDEAKDNIKNLAEDLKILLLPKDPNDERNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES ++ +L RMY+ +AEK+ FK E + ++ E G K + +I+G AY K E GV Sbjct: 121 EESALFSAVLFRMYSMYAEKKGFKIEIINANETEIGGYKEISFMIEGEGAYSRFKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P +D +E+EI +D +IDT+R+SGAGGQH+N T Sbjct: 181 HRVQRVPETESQGRVHTSTTTVAVLPEAED-VELEIDPNDLKIDTFRSSGAGGQHINKTS 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH+PTG+VV+CQ ERSQ+KNK +A +L+++L L+ ++ ++ + I E+ K ++G Sbjct: 240 SAIRITHLPTGMVVECQDERSQYKNKDKALKVLKSRL--LKEKQDKQASEIAENRKMQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R + ++L+G LD+ + A +A Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLYKLEEILNGSLDEVIDALVA 344 >gi|157964580|ref|YP_001499404.1| peptide chain release factor 1 [Rickettsia massiliae MTU5] gi|166977368|sp|A8F1S1|RF1_RICM5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157844356|gb|ABV84857.1| Peptide chain release factor RF-1 [Rickettsia massiliae MTU5] Length = 361 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 194/333 (58%), Gaps = 22/333 (6%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 F+ E L V + K + + L+ A +F E+ DN L + ED+ Sbjct: 30 FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIHT 83 Query: 85 LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L+ + L+R +K+ + L +ADS A +EV AG+GG E+ +A +L MY R Sbjct: 84 LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE + ++ E L I D G K A+ IKG + + LK E GVHR+ R+ +S R H Sbjct: 137 YAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ V P ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V Sbjct: 197 TSAATVAVLPEAEE-VDIQIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q E+SQHKNKA+A +LRA++YE E +K+E +S + ++G G +IR+Y P Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVGSGDRSERIRTYNF-PQ 312 Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 V D R N+ +V+ +G LD+F++A +A Sbjct: 313 GRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|71736680|ref|YP_273268.1| peptide chain release factor 1 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482007|ref|ZP_05636048.1| peptide chain release factor 1 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627918|ref|ZP_06460872.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647287|ref|ZP_06478630.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi str. 2250] gi|298485681|ref|ZP_07003760.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|119361578|sp|Q48MV4|RF1_PSE14 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71557233|gb|AAZ36444.1| peptide chain release factor 1 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159707|gb|EFI00749.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325690|gb|EFW81751.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea str. B076] gi|320327391|gb|EFW83405.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea str. race 4] gi|330868898|gb|EGH03607.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881882|gb|EGH16031.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea str. race 4] gi|330887864|gb|EGH20525.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str. 301020] gi|330988605|gb|EGH86708.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 360 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 118/286 (41%), Positives = 174/286 (60%), Gaps = 18/286 (6%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 + E+A+EE ++ET L ++LE + ++ LL + D + +LE+ AG GG E+ Sbjct: 76 MREMAVEE-----VRETKQQL--VELEAQLQRM--LLPKDPNDGRNVFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ Sbjct: 127 AIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG 309 RITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q+ AN I K +G G Sbjct: 247 RITHLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSG 303 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ S +VL G +D ++ LA Sbjct: 304 DRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348 >gi|127513840|ref|YP_001095037.1| peptide chain release factor 1 [Shewanella loihica PV-4] gi|166223603|sp|A3QH30|RF1_SHELP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|126639135|gb|ABO24778.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella loihica PV-4] Length = 361 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 111/281 (39%), Positives = 171/281 (60%), Gaps = 16/281 (5%) Query: 77 LEEDDCSILQETSDNLQRIK--LEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132 L EDD + + + ++ K L+V + + LL D N+A+LE+ AGAGG E+ Sbjct: 69 LAEDDADLKEMAQEEIKEAKATLDVLEGELQILLLPKDPKDDNNAFLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+ E +++ E + ++GE G K + + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYCEANRWQMEIMNANEGEHGGFKEIIVKVSGDGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ IEI+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVVVMPEIPEAEAIEINPADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEI---- 306 THIP+G+VV+CQ +RSQHKN+AQA ++L A++ +E +KR EE ES++ + Sbjct: 249 THIPSGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSEE-----ESTRRNLVASG 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++R+Y P V + R N+ S+V++GDLD + Sbjct: 304 DRSERVRTYNF-PQGRVSEHRINLTLYRLSEVMEGDLDAIL 343 >gi|154482489|ref|ZP_02024937.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC 27560] gi|149736690|gb|EDM52576.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC 27560] Length = 356 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 123/348 (35%), Positives = 199/348 (57%), Gaps = 12/348 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68 +FD D ++R + + DP++ + + LM+E+ L A KE + + D Sbjct: 1 MFDKLDGILERYDEIMEQLNDPNVVSDQNNFRKLMKEQSDLAPIVEAYKAYKEAKQTVED 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +L++L+ +E+ + +E ++ ++I E + L E D + +E+ GAGG Sbjct: 61 SLMILDEESDEEMRELAKEEMNEAKEQITELEEKLKILLLPKDENDDKNVVVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY +AE + +KTE + +++ G K +I G AY LK E GV Sbjct: 121 DEAALFAAELYRMYCMYAETQHWKTEMISVNENGLGGFKEVVFMINGQGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS +++ + P ++ +++EI +DCR D +RASG GGQ VNTTD Sbjct: 181 HRVQRIPVTESGGRIHTSTATVAIMPEAEE-VDVEIDMNDCRFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LRA+LYELE QK+++ + E+ +++IG Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRARLYELECQKKQDAES--EARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R ++L+G L++ + +A Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKFTSHRLDEILNGHLEEIIDNCIA 344 >gi|238899147|ref|YP_002924829.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259585226|sp|C4K7Y8|RF1_HAMD5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229466907|gb|ACQ68681.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 360 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 122/333 (36%), Positives = 182/333 (54%), Gaps = 13/333 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L DP Q+ +M+ RE L N E +L +++I + L+ D + Sbjct: 19 LQAHLADPLTIQDQERFRMMSREYAQLSNIAELFTEWL-KLQNDMIAAKSLLQ--DPEMH 75 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA----DSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + ++ L++ K++ E + + DS +LE+ AG GG E+ +A L RMY Sbjct: 76 EMATEELEKAKIQSEQLTQQLQILLLPKDIDDSRSCFLEIRAGTGGDEAAIFAGDLFRMY 135 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+AE R +K E + H+GE G K I G YG LK E G HR+ R+ +S R Sbjct: 136 ARYAESRSWKMEIISAHEGEHGGYKEMITKISGEGVYGQLKFESGGHRVQRVPTTESQGR 195 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS ++ V P + + +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV Sbjct: 196 IHTSACTVAVMPEIPEEELPKITLSDLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVV 255 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYVLQ 318 +CQ ERSQHKNKA+A ++L A+++ ++QKR++ + +G G + R+Y Sbjct: 256 ECQDERSQHKNKAKAMSVLGARMHAAQVQKRQQAQ--ASERRNLLGSGDRSDRHRTYNF- 312 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V D R N+ +V+ G LD + L Sbjct: 313 PQGRVTDHRINLTLYRLDEVMSGKLDILIHPLL 345 >gi|66044202|ref|YP_234043.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae B728a] gi|75503325|sp|Q4ZXW7|RF1_PSEU2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|63254909|gb|AAY36005.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae B728a] gi|330972814|gb|EGH72880.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 360 Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 123/313 (39%), Positives = 186/313 (59%), Gaps = 24/313 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L+R + L+ A + +K+ + + E+A+EE ++ET L ++LE + ++ Sbjct: 55 LLRVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQRM 101 Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 102 --LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHG 159 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P D+ IEI Sbjct: 160 GYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEI 219 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 + +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L AK Sbjct: 220 NPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAK 279 Query: 284 LYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L + Q+ AN I K +G G +IR+Y P V D R N+ S +VL Sbjct: 280 LND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVL 335 Query: 340 DGDLDDFMKATLA 352 G +D ++ LA Sbjct: 336 AGGVDAVIEPLLA 348 >gi|33595093|ref|NP_882736.1| peptide chain release factor 1 [Bordetella parapertussis 12822] gi|46576758|sp|Q7WCE3|RF1_BORPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33565170|emb|CAE35966.1| peptide chain release factor 1 [Bordetella parapertussis] Length = 360 Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 126/339 (37%), Positives = 183/339 (53%), Gaps = 11/339 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 RL ++ +P ++ + L RER L+ + D E+ L + Sbjct: 13 AHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADVATAQEM-LSD 71 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANM 136 D + E R ++E E + LL D +D +LE+ AG GG ES ++ Sbjct: 72 PDMKAMAEDEIKTGRARIE-EMEAALQLLLLPRDPDDGRSLFLEIRAGTGGDESALFSGD 130 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMYTR+AE R ++ E + + E G K + I G AYG LK E G HR+ R+ Sbjct: 131 LLRMYTRYAETRGWRVEIMSESESELGGYKEVIVRIDGDGAYGRLKFESGAHRVQRVPAT 190 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P D +I I+ SD RIDT+RASGAGGQH+N TDSAVRITH+P Sbjct: 191 EAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKTDSAVRITHVP 250 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV+CQ +RSQH+NK +A +L A+L + E+++R+ + K+ IG G +IR Sbjct: 251 TGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQ--SKEAAERKSLIGSGDRSERIR 308 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +Y P V D R N+ +++GDLD+ A LA Sbjct: 309 TYNY-PQGRVTDHRINLTLYKLQQIMEGDLDELTGALLA 346 >gi|167627296|ref|YP_001677796.1| peptide chain release factor 1 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189039973|sp|B0TX37|RF1_FRAP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167597297|gb|ABZ87295.1| peptide chain release factor 1 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 361 Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 117/314 (37%), Positives = 180/314 (57%), Gaps = 11/314 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY--K 102 L +E HL+ + KE L D E+ L E D +++ + L+ +E Sbjct: 38 LSKEYSHLEPIVMAFKEYTQALEDKEAAYEM-LNEKDAELVEMAKEELKSANESIERLED 96 Query: 103 QFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 + + LL ++DA +LE+ AG GG E+ ++ L +MY+++AE+R +K E + +G Sbjct: 97 ELQILLLPRDPNDDANIFLEIRAGTGGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEG 156 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G K I G Y LK E G HR+ R+ +S R HTS ++ V P D+ Sbjct: 157 EHGGYKEIISRIYGDGVYSQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEADEVEG 216 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+I+ +D ++DT+RASGAGGQHVN TDSA+RITHIPTGVVV+CQ +RSQHKN+A A +ML Sbjct: 217 IDINPADIKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSML 276 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 ++KL + E+ K+++ ++ K +G G +IR+Y P V D R N+ + Sbjct: 277 KSKLLQAEIDKQQK--EQSDTRKNLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDE 333 Query: 338 VLDGDLDDFMKATL 351 V++G LD ++ + Sbjct: 334 VMEGSLDSIIQPLI 347 >gi|77360001|ref|YP_339576.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis TAC125] gi|119361581|sp|Q3IK95|RF1_PSEHT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|76874912|emb|CAI86133.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas haloplanktis TAC125] Length = 361 Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 122/331 (36%), Positives = 185/331 (55%), Gaps = 11/331 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V+R + DP + ++ + L +E L+ + Q D +I E L++ Sbjct: 13 VERYEEVQALLSDPSVIRDQNRFRALSKEYSDLEEVVKTFLSYQQAQQD-VISAEEMLKD 71 Query: 80 DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 D I + + + K ++ + Q L D+N+ YLEV AG GG E+ +A Sbjct: 72 SDPDIREMAQEEYKEAKAQILTIEDEIQVLMLPKDPKDNNNVYLEVRAGTGGDEAAIFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE +K+K + + ++GE G K I G +G LK E GVHR+ R+ Sbjct: 132 DLFRMYSRYAETKKWKVDVVTTNEGEHGGYKEIIANISGEGVFGQLKFESGVHRVQRVPE 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V V ++ IEI+ +D ++DT+RASGAGGQHVN TDSA+RITHI Sbjct: 192 TESQGRVHTSACTVAVMAEVPEAEAIEINSADLKVDTFRASGAGGQHVNKTDSAIRITHI 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV+CQ +RSQHKN+A+A ++L A+L + E +KR+ A + +G G +I Sbjct: 252 PTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRD--AAEASERRNLVGSGDRSERI 309 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 R+Y P + D R N+ ++V+ GDL Sbjct: 310 RTYNY-PQGRITDHRINLTLYRLNEVVAGDL 339 >gi|89900074|ref|YP_522545.1| peptide chain release factor 1 [Rhodoferax ferrireducens T118] gi|119361589|sp|Q21YY9|RF1_RHOFD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|89344811|gb|ABD69014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodoferax ferrireducens T118] Length = 366 Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 121/310 (39%), Positives = 178/310 (57%), Gaps = 18/310 (5%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESL 107 Q L+ +S +E+ D+ + +A EE D + LQ+ + LQR+ L + Sbjct: 56 QQLEADLSGAQELLRGSVDDPDMTAMAQEEIDNASAELQKLENELQRMLLPKDPD----- 110 Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 D+ +A++E+ AG GG ES +A LLRMYTR+ E+R +K E + E G K Sbjct: 111 -----DARNAFVEIRAGTGGDESALFAADLLRMYTRYCERRGWKAEIISESPSELGGYKE 165 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 + I+G + YG LK E G HR+ R+ ++ R HTS ++ V D+++ I+I+ +D Sbjct: 166 VVIKIEGDHVYGALKFESGGHRVQRVPVTETQGRIHTSACTVAVLAEPDEAVAIQINPAD 225 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RIDTYRASGAGGQH+N TDSAVRITH+PTG+V +CQ RSQH NKAQA +L A+++E Sbjct: 226 LRIDTYRASGAGGQHINKTDSAVRITHLPTGIVAECQDGRSQHSNKAQALKVLTARIHEK 285 Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + E A K IG G +IR+Y P + D R N+ +++GDLD Sbjct: 286 D--RSERAAKDAAERKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLTIMEGDLD 342 Query: 345 DFMKATLAIK 354 D ++A A + Sbjct: 343 DVVQALQAFE 352 >gi|67459154|ref|YP_246778.1| peptide chain release factor 1 [Rickettsia felis URRWXCal2] gi|75536414|sp|Q4ULG0|RF1_RICFE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|67004687|gb|AAY61613.1| Peptide chain release factor RF-1 [Rickettsia felis URRWXCal2] Length = 355 Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 135/349 (38%), Positives = 201/349 (57%), Gaps = 29/349 (8%) Query: 16 WDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 ++N ++LS F+ E L V + K + + L+ A +F E+ D Sbjct: 14 YENLGKKLSSGIMGDEFVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LD 70 Query: 69 NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 N L + ED+ L+ + L+R +K+ + L +ADS A +EV AG+GG Sbjct: 71 NATL---EMIEDEIHTLENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L MY R+AE + ++ E L I D G K A+ IKG + + LK E GV Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ ++I+I + D RIDTYRASGAGGQHVNTTD Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E +K+E +S + ++G Sbjct: 240 SAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 G +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|157962943|ref|YP_001502977.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345] gi|189039992|sp|A8H7A5|RF1_SHEPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157847943|gb|ABV88442.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345] Length = 361 Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 116/308 (37%), Positives = 178/308 (57%), Gaps = 9/308 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-----L 97 + L +E L++ +S K Q + ++L + +EEDD + + + + K L Sbjct: 36 RALSKEYSQLEDVVSTFKSFQ-QAEEDLESAKEMMEEDDPELKEMAQEEYKVAKSAIAAL 94 Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 E E Q L D N+ ++E+ AGAGG E+ +A L RMY+R+AE ++++ E + Sbjct: 95 EDEL-QILLLPKDPNDDNNCFIEIRAGAGGDEAAIFAGDLFRMYSRYAESKRWQIEVMNT 153 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 ++GE G K I G YG LK E G HR+ R+ +S R HTS ++ V P V + Sbjct: 154 NEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQRVPETESQGRVHTSACTVIVLPEVPE 213 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 + IEI+++D ++DT+RASGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA Sbjct: 214 AEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAM 273 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 ++L A++ +E +KR + G +IR+Y P V + R N+ Sbjct: 274 SVLAARIQAVEDEKRRSAEESTRRNLVSSGDRSERIRTYNF-PQGRVSEHRINLTLYRLG 332 Query: 337 DVLDGDLD 344 + ++GD+D Sbjct: 333 EFMEGDID 340 >gi|229586782|ref|YP_002845283.1| peptide chain release factor 1 [Rickettsia africae ESF-5] gi|259585242|sp|C3PNN0|RF1_RICAE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|228021832|gb|ACP53540.1| Peptide chain release factor RF-1 [Rickettsia africae ESF-5] Length = 355 Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 194/333 (58%), Gaps = 22/333 (6%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 F+ E L V + K + + L+ A +F E+ DN L + ED+ Sbjct: 30 FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIYT 83 Query: 85 LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L+ + L+R +K+ + L +ADS A +EV AG+GG E+ +A +L MY R Sbjct: 84 LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE + ++ E L I D G K A+ IKG + + LK E GVHR+ R+ +S R H Sbjct: 137 YAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ V P ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V Sbjct: 197 TSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q E+SQHKNKA+A +LRA++YE E +K+E +S + ++G G +IR+Y P Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVGSGNRSERIRTYNF-PQ 312 Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 V D R N+ +V+ +G LD+F++A +A Sbjct: 313 GRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|289550267|ref|YP_003471171.1| Peptide chain release factor 1 [Staphylococcus lugdunensis HKU09-01] gi|315660273|ref|ZP_07913128.1| peptide chain release factor RF1 [Staphylococcus lugdunensis M23590] gi|289179799|gb|ADC87044.1| Peptide chain release factor 1 [Staphylococcus lugdunensis HKU09-01] gi|315494700|gb|EFU83040.1| peptide chain release factor RF1 [Staphylococcus lugdunensis M23590] Length = 358 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 124/345 (35%), Positives = 192/345 (55%), Gaps = 13/345 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCD 68 +FD D +R LN DP + N + + +E+ L + +E +++ L D Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNNADKLRKYSKEQAELQKTVDVYREYKNKKEELSD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +L ++++ +L+E S NL+ + L E +F + D D +E+ A AGG Sbjct: 61 IEDMLSETDDKEEIEMLKEESSNLKDALPLLEEKLKFLLIPKDPNDDKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMYT++AE F+TE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYTKYAEANGFRTEVVEATESDHGGYKEVSFQVSGAGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHIPTGVIA-TSSEKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G ++R+Y P V D R + +++G LD+ + A Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDA 340 >gi|83592089|ref|YP_425841.1| peptide chain release factor 1 [Rhodospirillum rubrum ATCC 11170] gi|119361593|sp|Q2RWE1|RF1_RHORT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83575003|gb|ABC21554.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodospirillum rubrum ATCC 11170] Length = 354 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 115/268 (42%), Positives = 159/268 (59%), Gaps = 14/268 (5%) Query: 95 IKLEVEYKQFES------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++LE E E L EAD LEV AG GG E+ +A LLRMY R+A++R Sbjct: 79 LRLEAEIPALEHGVKLLLLPRDEADDRGVILEVRAGTGGDEAALFAGDLLRMYERYAQER 138 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 ++ E +E D + GIK A+ I G + LK E GVHR+ R+ + R HTS ++ Sbjct: 139 GWRFEVMEASDTDIGGIKEASAAISGRGVFARLKFESGVHRVQRVPVTEGGGRIHTSAAT 198 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P ++ +++EI E D RIDTYR+ GAGGQHVNTTDSAVRITH+P+GVV QCQ E+S Sbjct: 199 VAVLPEAEE-VDVEIEEKDLRIDTYRSQGAGGQHVNTTDSAVRITHLPSGVVAQCQDEKS 257 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKD 325 QHKNKA+A MLR KLY+ Q ++ E+ + ++G G +IR+Y P V D Sbjct: 258 QHKNKAKAMRMLRTKLYDHARQTADDAR--AEARRVQVGSGDRSERIRTYNF-PQGRVTD 314 Query: 326 LRTNIEKTSPSDVLDGD-LDDFMKATLA 352 R + +VL G LD+ ++ +A Sbjct: 315 HRIGLTLHRLPEVLAGTALDEVIEPLIA 342 >gi|34580401|ref|ZP_00141881.1| peptide chain release factor RF-1 [Rickettsia sibirica 246] gi|28261786|gb|EAA25290.1| peptide chain release factor RF-1 [Rickettsia sibirica 246] Length = 355 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 194/333 (58%), Gaps = 22/333 (6%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 F+ E L V + K + + L+ A +F E+ DN L + ED+ Sbjct: 30 FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIYT 83 Query: 85 LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L+ + L+R +K+ + L +ADS A +EV AG+GG E+ +A +L MY R Sbjct: 84 LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE + ++ E L I D G K A+ IKG + + LK E GVHR+ R+ +S R H Sbjct: 137 YAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ V P ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V Sbjct: 197 TSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q E+SQHKNKA+A +LRA++YE E +K+E +S + ++G G +IR+Y P Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVGSGDRSERIRTYNF-PQ 312 Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 V D R N+ +V+ +G LD+F++A +A Sbjct: 313 GRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|330873307|gb|EGH07456.1| peptide chain release factor 1 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 360 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 118/286 (41%), Positives = 174/286 (60%), Gaps = 18/286 (6%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 + E+A+EE ++ET L ++LE + ++ LL + D + +LE+ AG GG E+ Sbjct: 76 MREMAVEE-----VRETKQQL--VELEAQLQRM--LLPKDPNDGRNVFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ Sbjct: 127 AIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG 309 RITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q+ AN I K +G G Sbjct: 247 RITHLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSG 303 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ S +VL G +D ++ LA Sbjct: 304 DRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 348 >gi|218196470|gb|EEC78897.1| hypothetical protein OsI_19275 [Oryza sativa Indica Group] gi|222630945|gb|EEE63077.1| hypothetical protein OsJ_17885 [Oryza sativa Japonica Group] Length = 368 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 113/262 (43%), Positives = 164/262 (62%), Gaps = 15/262 (5%) Query: 98 EVEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 ++++K F SLL EAD D LEV AG GG E+ +A + +MY ++++K +K +A++ Sbjct: 101 QLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAID 160 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 I + G K A+ I GP AYG LK E G+HR+ R+ + + R HTS S+ + P D Sbjct: 161 IMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQAD 220 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +++++ D RIDTYR+ G+GGQ VNTTDSAVRITH+PTG VV Q ERSQH+NKA+A Sbjct: 221 E-VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKA 279 Query: 277 WNMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +LRA+LYE+E + R ++ + IG ++E +IR+Y P V D R I Sbjct: 280 LKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGI 333 Query: 331 EKTSPSDVLDGD-LDDFMKATL 351 S DV++G+ LD F+ A L Sbjct: 334 THHSIEDVMEGESLDIFIDALL 355 >gi|327399685|ref|YP_004340554.1| peptide chain release factor 1 [Hippea maritima DSM 10411] gi|327182314|gb|AEA34495.1| Peptide chain release factor 1 [Hippea maritima DSM 10411] Length = 354 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 107/245 (43%), Positives = 150/245 (61%), Gaps = 7/245 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD D LE+ AG GG E+ +A L RMY+R+AE + FK E L + GIK Sbjct: 102 EADDRDVILEIRAGTGGEEAALFAADLFRMYSRYAENKGFKVEVLSKSLSDTGGIKEIIA 161 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG AY K E G HR+ RI +S R HTS +++ V P ++ +++EI D RI Sbjct: 162 EIKGKGAYHLFKHESGTHRVQRIPITESQGRIHTSAATVAVLPEAEN-VDVEIKPEDLRI 220 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +RASG GGQHVNTTDSAVRITH+PTG+VV CQ E+SQ KNK +A +L+++LY+ + Sbjct: 221 DVFRASGHGGQHVNTTDSAVRITHLPTGMVVSCQDEKSQLKNKEKALKILKSRLYDFYRR 280 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K++E + K++IG G +IR+Y P V D R N+ +++GDLD+ + Sbjct: 281 KKDE--ERAKERKSQIGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDSIMEGDLDELI 337 Query: 348 KATLA 352 +A + Sbjct: 338 EALIV 342 >gi|86148712|ref|ZP_01066989.1| peptide chain release factor 1 [Vibrio sp. MED222] gi|218708755|ref|YP_002416376.1| peptide chain release factor 1 [Vibrio splendidus LGP32] gi|254790907|sp|B7VKH3|RF1_VIBSL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|85833505|gb|EAQ51686.1| peptide chain release factor 1 [Vibrio sp. MED222] gi|218321774|emb|CAV17730.1| Peptide chain release factor 1 [Vibrio splendidus LGP32] Length = 362 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 124/346 (35%), Positives = 188/346 (54%), Gaps = 11/346 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L + V+R + DP + N + + L +E L+ K Q + ++L Sbjct: 6 LIKLETLVERYEEVQHLLGDPDVLGNQDKFRALSKEYSQLEEVTGCFKSYQ-QAQEDLEA 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E EDD + + + ++ K +E E +L D ND +LE+ AGAGG Sbjct: 65 AEEMANEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAGAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+++AEK+ ++ E + + E+ G K I G YG +K E G H Sbjct: 125 EAGIFAGNLFRMYSKFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFESGGH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ V P + ++ EI D +IDT+RASGAGGQHVNTTDS Sbjct: 185 RVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R A I ++ + +G Sbjct: 245 AIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAAISDTRRNLLGS 302 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R N+ ++VL+GD+ + L Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVL 347 >gi|94500021|ref|ZP_01306556.1| peptide chain release factor 1 [Oceanobacter sp. RED65] gi|94427879|gb|EAT12854.1| peptide chain release factor 1 [Oceanobacter sp. RED65] Length = 363 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 103/242 (42%), Positives = 152/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ ++ L RMYTR+AEKR +K E + ++GE G K I Sbjct: 109 DGKNVILEIRAGTGGDEAAIFSGDLFRMYTRYAEKRGWKCEVMSANEGEHGGYKEVITRI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P +++ +++I+++D RIDT Sbjct: 169 AGDGVYGQLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEIENEDDVDINKADLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A ++L +L + +QK Sbjct: 229 FRASGAGGQHVNKTDSAIRITHLPTGLVVECQEERSQHKNRAKAMSILATRLNDAVVQKA 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A K+ +G G +IR+Y P V D R N+ +++ GD+D ++ Sbjct: 289 Q--AEQAAERKSLVGSGDRSERIRTYNY-PQGRVSDHRINLTVYKLDELMQGDVDMIIQP 345 Query: 350 TL 351 L Sbjct: 346 LL 347 >gi|238797830|ref|ZP_04641323.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969] gi|238718358|gb|EEQ10181.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969] Length = 360 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 105/237 (44%), Positives = 149/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K + Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A+G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGEGAFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 Q----LAEASERRNLLGTGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|224035189|gb|ACN36670.1| unknown [Zea mays] Length = 301 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 114/261 (43%), Positives = 163/261 (62%), Gaps = 15/261 (5%) Query: 99 VEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 ++++ F SLL EAD D LEV AG GG E+ +A + RMY ++A+K +K + ++I Sbjct: 35 LQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDI 94 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 + G K A+ I GP A+G LK E G+HR+ R+ + + R HTS S+ V P D+ Sbjct: 95 MESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADE 154 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D RIDTYR+ G+GGQ VNTTDSAVRITHIPTG VV Q ERSQH NKA+A Sbjct: 155 -VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKAL 213 Query: 278 NMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 +LRA+LYELE ++ R ++ + IG ++E +IR+Y P V D R + Sbjct: 214 KVLRARLYELERRRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGVT 267 Query: 332 KTSPSDVLDGD-LDDFMKATL 351 S +DV++G+ LD F+ A L Sbjct: 268 HHSIADVMEGESLDMFVDALL 288 >gi|209694372|ref|YP_002262300.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238] gi|238058709|sp|B6EHH5|RF1_ALISL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|208008323|emb|CAQ78475.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238] Length = 362 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 120/319 (37%), Positives = 183/319 (57%), Gaps = 11/319 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L RE L+ + + ++ ++L+ + +EDD + + D Sbjct: 25 DPGVIGDQNKFRALSREYSQLEEVTQCFQAYE-KVQEDLVAAQEMAQEDDAEMREMAQDE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K E E +L D ND +LE+ AGAGG E+ +A L RMY+R+AEK Sbjct: 84 IKEAKEASERLTDELQVLLIPKDPNDERNCFLEIRAGAGGDEAGIFAGNLFRMYSRFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + H E+ G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 KGWRIEVMSSHASEQGGFKEMIAKVSGDGAYGILKFESGGHRVQRVPETESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 +I V + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TIAVMAEIPEADLPEIKSSDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A ++L A++ + E +R A + ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMSVLAARIIQAEEARR--AAVVSDTRRNLLGSGDRSDRIRTYNY-PQSRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDL 343 D R N+ ++V++GDL Sbjct: 321 DHRINLTIYRLNEVMEGDL 339 >gi|330975577|gb|EGH75643.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 360 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 123/313 (39%), Positives = 186/313 (59%), Gaps = 24/313 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L+R + L+ A + +K+ + + E+A+EE ++ET L ++LE + ++ Sbjct: 55 LLRVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETRQQL--VELEAQLQRM 101 Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 102 --LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHG 159 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P D+ IEI Sbjct: 160 GYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEI 219 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 + +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L AK Sbjct: 220 NPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAK 279 Query: 284 LYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L + Q+ AN I K +G G +IR+Y P V D R N+ S +VL Sbjct: 280 LND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEVL 335 Query: 340 DGDLDDFMKATLA 352 G +D ++ LA Sbjct: 336 AGGVDAVIEPLLA 348 >gi|297620931|ref|YP_003709068.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044] gi|297376232|gb|ADI38062.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044] Length = 354 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 122/350 (34%), Positives = 192/350 (54%), Gaps = 30/350 (8%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-------DNAISFIKEIQDRLCDNLIL 72 + RL L P + + ++L +E HL ++ IS KE+ D Sbjct: 9 LNRLPELEELLGQPDVVNDQKRYRLLTQEHAHLSQLKQVYEDLISSRKELSDNE------ 62 Query: 73 LELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGT 128 E+ E+D ++ ++++R+ K K+ E+L+ D+ + LE+ AG GG Sbjct: 63 -EMFASEEDAEFIKVLEEDIERLTKKTGELQKKLETLIVPPDPKDNKNTILELRAGTGGD 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ + +RMY +A++R +K E L + G K + + GPN Y +LK E G H Sbjct: 122 EAALFVGDCVRMYKMFADERGWKYEELASSPSDAGGFKEYMMALSGPNVYRYLKYEGGTH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V D+ E++I E D R+DTYRASGAGGQHVNTTDS Sbjct: 182 RVQRVPETETQGRVHTSAITVAVLLEPDEDSEVQIDEKDLRVDTYRASGAGGQHVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR------EEIANIGESS 302 AVR+THIPTG+V C +ERSQHKN+ +A +L+AK+ E+E QK+ E + +G Sbjct: 242 AVRLTHIPTGIVAYCSEERSQHKNRDKAMRLLKAKIMEIEAQKKFEERASERASQVGSGD 301 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 ++E +IR+Y P + D R N+ K + V++GDL++ + A +A Sbjct: 302 RSE-----RIRTYNF-PQNRITDHRINLTKYNLDKVMEGDLEEIVNAIVA 345 >gi|268592708|ref|ZP_06126929.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131] gi|291311851|gb|EFE52304.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131] Length = 360 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 151/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AGAGG E+ +A L RMY+R+AE +++ E + DGE G K I Sbjct: 107 DEYNCFVEIRAGAGGDEAAIFAGDLFRMYSRYAENNRWRVELMSTSDGEHGGFKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E G HR+ R+ +S R HTS ++ + P + ++ EIS +D RIDT Sbjct: 167 SGDSVYGRLKFESGGHRVQRVPETESQGRIHTSACTVAILPELPEAELPEISPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + +G G +IR+Y P V D R N+ +V++G LD ++ Sbjct: 287 Q--AAEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDSLIQP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|195650889|gb|ACG44912.1| peptide chain release factor 1 [Zea mays] Length = 356 Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 114/258 (44%), Positives = 160/258 (62%), Gaps = 9/258 (3%) Query: 99 VEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 ++++ F SLL EAD D LEV AG GG E+ +A + RMY ++A+K +K + ++I Sbjct: 90 LQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDI 149 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 + G K A+ I GP A+G LK E G+HR+ R+ + + R HTS S+ V P D+ Sbjct: 150 MESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADE 209 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D RIDTYR+ G+GGQ VNTTDSAVRITHIPTG VV Q ERSQH NKA+A Sbjct: 210 -VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKAL 268 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334 +LRA+LYELE +R + + +IG G +IR+Y P V D R + S Sbjct: 269 KVLRARLYELE--RRRLHMDRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGVTHHS 325 Query: 335 PSDVLDGD-LDDFMKATL 351 +DV++G+ LD F+ A L Sbjct: 326 IADVMEGESLDMFVDALL 343 >gi|157376591|ref|YP_001475191.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3] gi|189039993|sp|A8FYZ0|RF1_SHESH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157318965|gb|ABV38063.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3] Length = 361 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 121/350 (34%), Positives = 200/350 (57%), Gaps = 19/350 (5%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L GL + + V L+ L+ DP + + + L +E L++ ++ K Q D Sbjct: 9 LEGLLERNEEV--LALLS----DPGVISDQERFRALSKEYSQLEDVVTSFKSFQQATEDL 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLL--SGEADSNDAYLEVHAGA 125 E+A +DD + + + ++ K LE + + LL D N+ ++E+ AGA Sbjct: 63 EAAKEMA-SDDDPELKEMAQEEMKEAKSLLEKLEDELQILLLPKDPNDDNNCFIEIRAGA 121 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY+++ E ++++ E + ++GE G K + G YG LK E Sbjct: 122 GGDEAAIFAGDLFRMYSKYVESKRWQLEVMNTNEGEHGGFKEVIAKVSGEGVYGQLKFES 181 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS ++ V P + +S IEI++ D ++DT+RASGAGGQHVN Sbjct: 182 GGHRVQRVPETESQGRVHTSACTVVVLPEIPESEAIEINKGDLKVDTFRASGAGGQHVNK 241 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSA+R+THIP+G+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + ES++ Sbjct: 242 TDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRR---SAEESTRRN 298 Query: 306 -IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V + R N+ ++V++G+LD ++ + Sbjct: 299 LVGSGDRSERIRTYNF-PQGRVSEHRINLTLYRLNEVMEGELDAILEPLM 347 >gi|52842546|ref|YP_096345.1| peptide chain release factor 1 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54295177|ref|YP_127592.1| peptide chain release factor 1 [Legionella pneumophila str. Lens] gi|54298226|ref|YP_124595.1| peptide chain release factor 1 [Legionella pneumophila str. Paris] gi|61214584|sp|Q5WUB1|RF1_LEGPL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61214585|sp|Q5X2V3|RF1_LEGPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61214588|sp|Q5ZT29|RF1_LEGPH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52629657|gb|AAU28398.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53752011|emb|CAH13437.1| peptide chain release factor 1 [Legionella pneumophila str. Paris] gi|53755009|emb|CAH16497.1| peptide chain release factor 1 [Legionella pneumophila str. Lens] gi|307611181|emb|CBX00825.1| peptide chain release factor 1 [Legionella pneumophila 130b] Length = 362 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 113/283 (39%), Positives = 167/283 (59%), Gaps = 10/283 (3%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHA 123 +NL L LE DD + + + +K ++E Q+ + D + YLEV A Sbjct: 60 NNLDSLNELLESDDKDLATMAEEEIDTVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRA 119 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +A L RMY+R+AE + ++ E + GE G K I G Y LK Sbjct: 120 GTGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKF 179 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ + P VD+ +I+I+ D RIDTYR+SGAGGQHV Sbjct: 180 ESGAHRVQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHV 239 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSA+RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E+ K+++ ++ K Sbjct: 240 NKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQ--EQAQTRK 297 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 + +G G +IR+Y P + D R N+ SD+++G+L Sbjct: 298 SLVGTGDRSERIRTYNF-PQGRLTDHRINLTIYQLSDIMEGNL 339 >gi|53804790|ref|YP_113526.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath] gi|61214591|sp|Q60A21|RF1_METCA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|53758551|gb|AAU92842.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath] Length = 360 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 152/242 (62%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY+R+AE++ ++ E + +GE G K + I Sbjct: 109 DERNVFLEVRAGTGGAEAAIFAGDLQRMYSRYAERQGWRAEIVSESEGEHGGYKEVVMRI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y LK E G HR+ R+ ++ R HTS ++ + P DD +EI+I+ +D RIDT Sbjct: 169 SGQNVYSRLKFEAGTHRVQRVPTTEAQGRIHTSACTVAILPEFDD-VEIDINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITHIPTG VV+CQ ERSQHKN+A+A ++L+A++ L + Sbjct: 228 FRASGAGGQHVNRTDSAIRITHIPTGTVVECQDERSQHKNRARAMSLLQARI--LAAAQE 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + I S K ++G G +IR+Y P + D R N+ +++GDLD + Sbjct: 286 KQNSEIAASRKLQVGSGDRSERIRTYNF-PQGRLTDHRINLTIYRLDAIMEGDLDPVIDP 344 Query: 350 TL 351 L Sbjct: 345 LL 346 >gi|307131078|ref|YP_003883094.1| peptide chain release factor RF-1 [Dickeya dadantii 3937] gi|306528607|gb|ADM98537.1| peptide chain release factor RF-1 [Dickeya dadantii 3937] Length = 361 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 104/235 (44%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LE+ AG GG E+ +A L RMY+R+AE R++K E + DGE G K + Sbjct: 107 DERGCFLEIRAGTGGDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P V ++ +I+ +D RIDT Sbjct: 167 AGDGAYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G +IR+Y P V D R N+ + ++G LD Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338 >gi|255020676|ref|ZP_05292738.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC 51756] gi|254969912|gb|EET27412.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC 51756] Length = 365 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 119/275 (43%), Positives = 159/275 (57%), Gaps = 12/275 (4%) Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 AL E+D +E L RI+ E Q L D + +LE+ AG GG E+ +A Sbjct: 81 ALAEEDQ---REAEAELARIE---ESLQVRLLPRDPNDERNVFLEIRAGTGGEEAALFAA 134 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMYTR+AE R F L + E G K L I G AY LK E G HR+ R+ Sbjct: 135 DLARMYTRYAEGRGFGVTVLSSTESERGGYKEIVLEISGRGAYSRLKFESGGHRVQRVPE 194 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P VD EI I SD RIDTYRASGAGGQHVN TDSA+RITH+ Sbjct: 195 TESQGRIHTSACTVAVLPEVDAVHEIHIQPSDLRIDTYRASGAGGQHVNKTDSAIRITHL 254 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV CQ++RSQHKN+A+A +L+A+L LE+ + ++ ++ + ++ IG G +I Sbjct: 255 PTGLVVACQEDRSQHKNRARAMALLQARL--LEMVREQQESSTAATRRSLIGSGDRSERI 312 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 R+Y P + D R N+ VL G+LD + Sbjct: 313 RTYNF-PQGRITDHRINLTIYRLEAVLAGELDALI 346 >gi|238650227|ref|YP_002916078.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic] gi|259585243|sp|C4K0C9|RF1_RICPU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238624325|gb|ACR47031.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic] Length = 355 Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 194/333 (58%), Gaps = 22/333 (6%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 F+ E L V + K + + L+ A +F E+ DN L + ED+ Sbjct: 30 FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIYT 83 Query: 85 LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L+ + L+R +K+ + L +ADS A +EV AG+GG E+ +A +L MY R Sbjct: 84 LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE + ++ E L I D G K A+ IKG + + LK E GVHR+ R+ +S R H Sbjct: 137 YAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ V P ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V Sbjct: 197 TSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q E+SQHKNKA+A +LRA++YE E +K+E +S + ++G G +IR+Y P Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVGSGDRSERIRTYNF-PQ 312 Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 V D R N+ +V+ +G LD+F++A +A Sbjct: 313 GRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|215764957|dbj|BAG86654.1| unnamed protein product [Oryza sativa Japonica Group] Length = 314 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 113/262 (43%), Positives = 164/262 (62%), Gaps = 15/262 (5%) Query: 98 EVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 ++++K F SLL EAD D LEV AG GG E+ +A + +MY ++++K +K +A++ Sbjct: 47 QLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAID 106 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 I + G K A+ I GP AYG LK E G+HR+ R+ + + R HTS S+ + P D Sbjct: 107 IMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQAD 166 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +++++ D RIDTYR+ G+GGQ VNTTDSAVRITH+PTG VV Q ERSQH+NKA+A Sbjct: 167 E-VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKA 225 Query: 277 WNMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +LRA+LYE+E + R ++ + IG ++E +IR+Y P V D R I Sbjct: 226 LKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGI 279 Query: 331 EKTSPSDVLDGD-LDDFMKATL 351 S DV++G+ LD F+ A L Sbjct: 280 THHSIEDVMEGESLDIFIDALL 301 >gi|220915515|ref|YP_002490819.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans 2CP-1] gi|254790857|sp|B8JAU2|RF1_ANAD2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219953369|gb|ACL63753.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans 2CP-1] Length = 370 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 115/336 (34%), Positives = 195/336 (58%), Gaps = 12/336 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QR L DP + N + + +ER ++ ++ ++ + +L +++ E L + Sbjct: 15 QRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYR-KLLEDVEGNEALLADK 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANM 136 D + + + L +++ +V+ + + L D D +E+ AGAGG E+ +A Sbjct: 74 DPELRELAKEELAQLRPQVDPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGLFAAE 133 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 ++RMY R+AE+R ++ E ++ G G+K ATL + G Y LK E GVHR+ R+ Sbjct: 134 VMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQRVPAT 193 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P ++ I+++++ +D +D +R++G+GGQ VNTTDSAVR+TH P Sbjct: 194 EAQGRIHTSTVTVAVMPEAEE-IDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRLTHKP 252 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV+CQQE+SQ KN+ A MLRAKL+E+E Q+R+ A + K+++G G +IR Sbjct: 253 TGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIE-QERQRSARDA-TRKSQVGTGDRSEKIR 310 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +Y P + D R N + + V+DGD+ D + A Sbjct: 311 TYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDA 345 >gi|153002121|ref|YP_001367802.1| peptide chain release factor 1 [Shewanella baltica OS185] gi|166223602|sp|A6WSF0|RF1_SHEB8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151366739|gb|ABS09739.1| peptide chain release factor 1 [Shewanella baltica OS185] Length = 363 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 114/310 (36%), Positives = 182/310 (58%), Gaps = 7/310 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L++ ++ K Q D E+ LEEDD + + + ++ K ++E+ Sbjct: 36 RALSKEYAQLEDVVAGFKAYQQAQADLDSAKEM-LEEDDAEMREMAQEEMKAAKAKLEHL 94 Query: 103 QFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E LL + D + +A++E+ AGAGG E+ +A L RMY+R+AE +++ E + + Sbjct: 95 EDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K + + G YG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EGEHGGFKEVIMKVSGEGVYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA + Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ +E +KR S G ++R+Y P V + R N+ ++ Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333 Query: 338 VLDGDLDDFM 347 V++GDLD + Sbjct: 334 VMEGDLDAIL 343 >gi|297543676|ref|YP_003675978.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841451|gb|ADH59967.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 356 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 105/242 (43%), Positives = 156/242 (64%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A+ L RMY+ +AEK+ +K E + ++ + G K L I Sbjct: 105 DEKNVIMEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ ++ R HTS +++ V P V++ +++EI+ +D RID Sbjct: 165 SGKGAYSRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEE-VDVEINPNDIRIDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+ G GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ++ Sbjct: 224 FRSGGHGGQSVNTTDSAVRVTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQ 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ I E K+++G G +IR+Y P V D R + +VLDGDLD+ + A Sbjct: 284 QK--EIAEVRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDA 340 Query: 350 TL 351 + Sbjct: 341 LI 342 >gi|167625123|ref|YP_001675417.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4] gi|189039991|sp|B0TR27|RF1_SHEHH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167355145|gb|ABZ77758.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4] Length = 361 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/308 (37%), Positives = 176/308 (57%), Gaps = 9/308 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-----L 97 + L +E L++ + K Q D E+ +EEDD + + + + K L Sbjct: 36 RALSKEYSQLEDVVRTFKSYQQAEEDFESAKEM-MEEDDPELKEMAQEEYKATKEAIATL 94 Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 E E Q L D N+ ++E+ AGAGG E+ +A L RMY+R+AE ++++ E + Sbjct: 95 EAEL-QILLLPKDPNDDNNCFIEIRAGAGGDEAAIFAGDLFRMYSRYAESKRWQIEVMNT 153 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 ++GE G K I G YG LK E G HR+ R+ +S R HTS ++ V P V + Sbjct: 154 NEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQRVPETESQGRVHTSACTVIVLPEVPE 213 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 + IEI+++D ++DT+RASGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA Sbjct: 214 AEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAM 273 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 ++L A++ +E +KR + G +IR+Y P V + R N+ + Sbjct: 274 SVLAARIQAVEDEKRRSAEESTRRNLVSSGDRSERIRTYNY-PQGRVSEHRINLTLYRLN 332 Query: 337 DVLDGDLD 344 + ++GD+D Sbjct: 333 EFMEGDID 340 >gi|91228927|ref|ZP_01262825.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01] gi|269965455|ref|ZP_06179574.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B] gi|91187510|gb|EAS73844.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01] gi|269829934|gb|EEZ84164.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B] Length = 362 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 120/327 (36%), Positives = 184/327 (56%), Gaps = 11/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + N + + L RE L+ + Q + ++L+ E EDD + + + Sbjct: 25 DPDVIGNQDKFRALSREYSQLEEVTKCFQAYQ-QAQEDLVAAEEMANEDDEEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+++AEK Sbjct: 84 IKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A +L A++ + E ++R A + ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ ++V++GDL + + Sbjct: 321 DHRINLTIYRLNEVMEGDLQSLIDPVI 347 >gi|93006237|ref|YP_580674.1| peptide chain release factor 1 [Psychrobacter cryohalolentis K5] gi|119361584|sp|Q1QAW3|RF1_PSYCK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|92393915|gb|ABE75190.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter cryohalolentis K5] Length = 362 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 113/294 (38%), Positives = 176/294 (59%), Gaps = 17/294 (5%) Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHA 123 D +L+ A + D ++QE D+ + +E+E + +L+ D ND A+LE+ A Sbjct: 63 ADAEAMLKEASDPDMKEMMQEEIDSARDTIVEME--EALNLMMLPKDPNDKVPAFLEIRA 120 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ ++ L RMY ++A+ + + E L ++GE G K + G + YG LK Sbjct: 121 GTGGDEAAIFSGDLFRMYQKFAQNQGWTLEILSANEGEHGGYKEIITRVSGNSVYGRLKF 180 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ +S R HTS ++ V P V+ ++++ +D R DT+R+SGAGGQHV Sbjct: 181 ESGVHRVQRVPDTESQGRVHTSACTVAVMPEVEIDDTVDLNPADIRFDTFRSSGAGGQHV 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN------ 297 NTTDSAVR+THIPTG VV+CQQERSQHKN+AQA ML +K+ ++++Q + + A+ Sbjct: 241 NTTDSAVRLTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTIRRDL 300 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G ++E +IR+Y P + D R N+ +++GDLD+ + A L Sbjct: 301 VGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDSIMEGDLDEILDALL 348 >gi|330684805|gb|EGG96498.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU121] Length = 358 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 125/346 (36%), Positives = 195/346 (56%), Gaps = 15/346 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD V+ R LN DP + + + + +E+ L + K ++ L D Sbjct: 1 MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 +L ++++ +L+E S +L+ E+E +Q + LL D D +E+ A AG Sbjct: 61 IEEMLNETSDKEEIEMLKEESSSLKNELPEME-EQLKLLLIPKDPNDEKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L+RMY+++AE FKTE +E+ + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAHHFKTEIVEVSESDHGGYKEISFSVSGNGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G +IR+Y P V D R + S +++G+LD+ + A Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLSQIMEGNLDEIIDA 340 >gi|33152002|ref|NP_873355.1| peptide chain release factor 1 [Haemophilus ducreyi 35000HP] gi|46576749|sp|Q7VMV9|RF1_HAEDU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33148224|gb|AAP95744.1| peptide chain release factor 1 (RF-1) [Haemophilus ducreyi 35000HP] Length = 360 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/279 (40%), Positives = 175/279 (62%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135 DD + + ++ + + K E+E +Q +L D ND A+LE+ AG GG E+ +A Sbjct: 70 DDPDMKEMATEEITQNKAEIECLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE ++++ E + ++ E+ G K + I G + YG LK E G HR+ R+ Sbjct: 130 DLYRMYSRYAESKRWRIEEMSANESEQGGYKEIIVKISGESVYGQLKFESGGHRVQRVPK 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+ Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKNKA+A +L +++ ++E Q+R+ +A ++ + +G G +I Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVE-QERQAMAQ-ADTRRNLLGTGDRSDKI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++G +D+ ++ + Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|48926665|gb|AAT47454.1| putative peptide chain release factor [Oryza sativa Japonica Group] Length = 350 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 113/262 (43%), Positives = 164/262 (62%), Gaps = 15/262 (5%) Query: 98 EVEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 ++++K F SLL EAD D LEV AG GG E+ +A + +MY ++++K +K +A++ Sbjct: 83 QLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAID 142 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 I + G K A+ I GP AYG LK E G+HR+ R+ + + R HTS S+ + P D Sbjct: 143 IMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQAD 202 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +++++ D RIDTYR+ G+GGQ VNTTDSAVRITH+PTG VV Q ERSQH+NKA+A Sbjct: 203 E-VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKA 261 Query: 277 WNMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +LRA+LYE+E + R ++ + IG ++E +IR+Y P V D R I Sbjct: 262 LKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGI 315 Query: 331 EKTSPSDVLDGD-LDDFMKATL 351 S DV++G+ LD F+ A L Sbjct: 316 THHSIEDVMEGESLDIFIDALL 337 >gi|302390589|ref|YP_003826410.1| bacterial peptide chain release factor 1 (bRF-1) [Thermosediminibacter oceani DSM 16646] gi|302201217|gb|ADL08787.1| bacterial peptide chain release factor 1 (bRF-1) [Thermosediminibacter oceani DSM 16646] Length = 364 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 124/349 (35%), Positives = 201/349 (57%), Gaps = 13/349 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD--- 68 + D +A++ R L + +P + E + L +E L+ +S +E + + + Sbjct: 1 MLDKLDAIEERYEELTREISEPAVIARQEEWRKLAKEHASLEEIVSCYREYKKVVSEIKE 60 Query: 69 -NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126 +L E + + + ++E +NLQ+ + E++ + LL + D D +E+ AGAG Sbjct: 61 SRELLKETSNDREMEEFIKEELENLQKREKELQERLKILLLPKDPNDEKDVIMEIRAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMYTR+AE++ +K E + E G K + G AY LK E G Sbjct: 121 GEEAALFAGDLFRMYTRYAERQGWKVELMSSSPTELGGFKEVIFEVMGRGAYSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ RI ++ R HTS +++ V P ++ +++EI+ ++ RID +R+SG GGQ VNTT Sbjct: 181 VHRVQRIPVTEAGGRIHTSTATVAVLPEAEE-VDVEINPNELRIDVFRSSGHGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ ERSQ KN+ +A +LRAKL LE+++RE+ I +S ++++ Sbjct: 240 DSAVRITHLPTGIVVTCQDERSQLKNRDKAMKILRAKL--LEMKQREQNEKIAQSRRSQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G G +IR+Y P V D R ++LDG+LD+ ++ +A Sbjct: 298 GTGDRSERIRTYNF-PQGRVTDHRIGFTTHQLENILDGELDELIERLIA 345 >gi|239832947|ref|ZP_04681276.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301] gi|239825214|gb|EEQ96782.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301] Length = 357 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 123/319 (38%), Positives = 180/319 (56%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + I+E+ D + + +LA DD + L+E + +RI Sbjct: 35 LASEYSELQEVVGKIRELTDARREAV---DLAAMRDDAATDAEMRALALEELPEVEKRIG 91 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 92 TLEQEVQILLLPKDAADEKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E ES ++++G G +IR+Y P V D R N+ Sbjct: 270 MQILRARLYDMERQKAE--TERSESRRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 327 KLDRVMEGDLDELVDALIS 345 >gi|237799727|ref|ZP_04588188.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022582|gb|EGI02639.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 360 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 123/315 (39%), Positives = 185/315 (58%), Gaps = 24/315 (7%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K L++ + L+ A + +K+ + D +A+EE ++ET L + LE + + Sbjct: 53 KQLIKVQADLEGAQALLKDSDPDMRD------MAVEE-----VRETKQQL--VDLEAQLQ 99 Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 100 RM--LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P D+ I Sbjct: 158 HGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAI 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLS 277 Query: 282 AKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 AKL + Q+ AN I K +G G +IR+Y P V D R N+ S + Sbjct: 278 AKLND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDE 333 Query: 338 VLDGDLDDFMKATLA 352 VL G +D ++ LA Sbjct: 334 VLAGGVDAVIEPLLA 348 >gi|115462961|ref|NP_001055080.1| Os05g0277300 [Oryza sativa Japonica Group] gi|113578631|dbj|BAF16994.1| Os05g0277300 [Oryza sativa Japonica Group] Length = 349 Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 113/262 (43%), Positives = 164/262 (62%), Gaps = 15/262 (5%) Query: 98 EVEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 ++++K F SLL EAD D LEV AG GG E+ +A + +MY ++++K +K +A++ Sbjct: 82 QLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAID 141 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 I + G K A+ I GP AYG LK E G+HR+ R+ + + R HTS S+ + P D Sbjct: 142 IMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQAD 201 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +++++ D RIDTYR+ G+GGQ VNTTDSAVRITH+PTG VV Q ERSQH+NKA+A Sbjct: 202 E-VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKA 260 Query: 277 WNMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +LRA+LYE+E + R ++ + IG ++E +IR+Y P V D R I Sbjct: 261 LKVLRARLYEIERHRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGI 314 Query: 331 EKTSPSDVLDGD-LDDFMKATL 351 S DV++G+ LD F+ A L Sbjct: 315 THHSIEDVMEGESLDIFIDALL 336 >gi|167038490|ref|YP_001666068.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116886|ref|YP_004187045.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687641|sp|B0K7G6|RF1_THEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166857324|gb|ABY95732.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929977|gb|ADV80662.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 356 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 121/332 (36%), Positives = 192/332 (57%), Gaps = 10/332 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ K DP++ NV E + ++E +++ + +E + L D EL D+ Sbjct: 15 LSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKELLSSNDEELKE 74 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYT 142 + Q + + + + +L D ND +E+ AGAGG E+ +A+ L RMY+ Sbjct: 75 MAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAALFAHDLFRMYS 134 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 +AEK+ +K E + ++ + G K L I G +Y LK E GVHR+ R+ ++ R Sbjct: 135 MYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESGVHRVQRVPTTEAGGRI 194 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS +++ V P V++ +++EI+ +D +ID +R+ G GGQ VNTTDSAVR+THIPTG+VV Sbjct: 195 HTSTATVAVLPEVEE-VDVEINPNDIKIDVFRSGGHGGQSVNTTDSAVRVTHIPTGIVVT 253 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 CQ ERSQ +N+ +A +LRAKLYE+ LQ+++ I E+ K+++G G +IR+Y P Sbjct: 254 CQDERSQIQNRERALKILRAKLYEMALQEQQR--EIAETRKSQVGTGERSERIRTYNF-P 310 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V D R + +VLDGDLD+ + A + Sbjct: 311 QGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342 >gi|283798430|ref|ZP_06347583.1| peptide chain release factor 1 [Clostridium sp. M62/1] gi|291073835|gb|EFE11199.1| peptide chain release factor 1 [Clostridium sp. M62/1] gi|295090782|emb|CBK76889.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium cf. saccharolyticum K10] gi|295115024|emb|CBL35871.1| bacterial peptide chain release factor 1 (bRF-1) [butyrate-producing bacterium SM4/1] Length = 358 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 127/351 (36%), Positives = 208/351 (59%), Gaps = 18/351 (5%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68 +FD D+ + R L + +P++ ++ + + LM+E+ L A K+ + D Sbjct: 1 MFDRLDDLLIRYEELMEELNNPYVVEDQKKFRKLMKEQADLAPIVEAYKNYKQAHQDVED 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124 ++ LLE +E+ + +E +D +RI+ E +Q +L D ND +E+ AG Sbjct: 61 SVALLEEESDEEMRELAKEELADAKKRIE---ELEQELKILLLPKDPNDEKNVMVEIRAG 117 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A+ L RMY R+AE++++KTE + +++ G K ++ G AY LK E Sbjct: 118 AGGDEAALFASELYRMYVRYAERKRWKTEIVSLNENGIGGFKEVVFMVTGQGAYSKLKYE 177 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS +++ V P ++ +IEI +DCRID RASG GGQ VN Sbjct: 178 SGVHRVQRVPETESGGRIHTSTATVAVMPEAEE-FDIEIDMNDCRIDVMRASGNGGQCVN 236 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+TH+PTG+V+ Q E+SQ +NK +A+ +LR+KLY+LEL++R+ + E+ ++ Sbjct: 237 TTDSAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELERRQ--SEESEARRS 294 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IG G +IR+Y P V + R + V+DG+LD+ + + +A Sbjct: 295 QIGTGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDSVMDGELDELIDSLIA 344 >gi|148981991|ref|ZP_01816579.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3] gi|145960679|gb|EDK26023.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3] Length = 362 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 122/346 (35%), Positives = 191/346 (55%), Gaps = 11/346 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L + V+R + DP + + + + L +E L+ + Q + D+L Sbjct: 6 LVKLETLVERYEEVQHLLGDPDVIGDQNKFRALSKEYSQLEEVTKCFQAYQ-QAQDDLEA 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E +EDD + + + ++ K +E E +L D ND +LE+ AGAGG Sbjct: 65 AEDMAQEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDERNCFLEIRAGAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+++AEK+ ++ E + +D E+ G K + G YG +K E G H Sbjct: 125 EAGIFAGNLFRMYSKFAEKKGWRVEVMSSNDSEQGGYKEMIAKVSGEGVYGVMKFESGGH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ V P + ++ EI +D +IDT+RASGAGGQHVNTTDS Sbjct: 185 RVQRVPETESQGRVHTSACTVAVMPEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R A + ++ + +G Sbjct: 245 AIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGS 302 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R N+ ++VL+GD+ + L Sbjct: 303 GDRSDRIRTYNY-PQGRVSDHRINLTLYRLNEVLEGDMQSLIDPVL 347 >gi|148359876|ref|YP_001251083.1| peptide chain release factor 1 [Legionella pneumophila str. Corby] gi|296107926|ref|YP_003619627.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy] gi|166223567|sp|A5IED7|RF1_LEGPC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148281649|gb|ABQ55737.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila str. Corby] gi|295649828|gb|ADG25675.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy] Length = 362 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 113/283 (39%), Positives = 167/283 (59%), Gaps = 10/283 (3%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHA 123 +NL L LE DD + + + +K ++E Q+ + D + YLEV A Sbjct: 60 NNLDSLNELLESDDKDLATMAEEEIDIVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRA 119 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +A L RMY+R+AE + ++ E + GE G K I G Y LK Sbjct: 120 GTGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKF 179 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ + P VD+ +I+I+ D RIDTYR+SGAGGQHV Sbjct: 180 ESGAHRVQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHV 239 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSA+RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E+ K+++ ++ K Sbjct: 240 NKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQ--EQAQTRK 297 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 + +G G +IR+Y P + D R N+ SD+++G+L Sbjct: 298 SLVGTGDRSERIRTYNF-PQGRLTDHRINLTIYQLSDIMEGNL 339 >gi|160876841|ref|YP_001556157.1| peptide chain release factor 1 [Shewanella baltica OS195] gi|189039990|sp|A9L2D4|RF1_SHEB9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160862363|gb|ABX50897.1| peptide chain release factor 1 [Shewanella baltica OS195] gi|315269044|gb|ADT95897.1| peptide chain release factor 1 [Shewanella baltica OS678] Length = 363 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 114/310 (36%), Positives = 182/310 (58%), Gaps = 7/310 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L++ ++ K Q D E+ LEEDD + + + ++ K ++E+ Sbjct: 36 RALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM-LEEDDAEMREMAQEEMKAAKAKLEHL 94 Query: 103 QFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E LL + D + +A++E+ AGAGG E+ +A L RMY+R+AE +++ E + + Sbjct: 95 EDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQIEIMSCN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K + + G YG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVLHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I I+ +D ++DT+R+SGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA + Sbjct: 215 EAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ +E +KR S G ++R+Y P V + R N+ ++ Sbjct: 275 VLAARIQAVEDEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLNE 333 Query: 338 VLDGDLDDFM 347 V++GDLD + Sbjct: 334 VMEGDLDAIL 343 >gi|192360464|ref|YP_001981172.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107] gi|238692456|sp|B3PJP4|RF1_CELJU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|190686629|gb|ACE84307.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107] Length = 360 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/240 (45%), Positives = 147/240 (61%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLEV AG GG E+ ++ L RMY+R+AE + ++ E L +GE G K L+ Sbjct: 109 DEKNCYLEVRAGTGGDEAAIFSGDLFRMYSRYAETQGWRVEILSQSEGEHGGFKEIISLV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ V P D+ E+ I+++D RIDT Sbjct: 169 SGSGVYSKLKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADELEEVNINKADLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSA+RITHIPTG+VV+CQ ERSQHKN+A+A ++L KL ++ Sbjct: 229 YRASGAGGQHVNKTDSAIRITHIPTGIVVECQDERSQHKNRARAMSLLATKLKTMQ---- 284 Query: 293 EEIAN--IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 EE A+ I E + +G G +IR+Y P V D R N+ S V+ GDL+ + Sbjct: 285 EEAAHKSISEERRNLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYSLDAVMQGDLEPVI 343 >gi|118443694|ref|YP_879014.1| peptide chain release factor 1 [Clostridium novyi NT] gi|166223551|sp|A0Q312|RF1_CLONN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118134150|gb|ABK61194.1| peptide chain release factor 1 [Clostridium novyi NT] Length = 357 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 124/335 (37%), Positives = 194/335 (57%), Gaps = 15/335 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALEEDDC 82 L+ K DP + N E + L +E L+ ++ +E + + L N +L ++D Sbjct: 15 LSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKTNKEELEANKEMLSEETDKDMK 74 Query: 83 SILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139 ++QE L+ +K + E K LL + D + ++E+ AGAGG E+ +A L R Sbjct: 75 EMIQEEIKTLEESIVKDQEELKIL--LLPKDPNDDKNVFIEIRAGAGGDEAALFAANLFR 132 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MYTR+AE+ +KTE + ++ + G K +++G AY +K E GVHR+ R+ +S+ Sbjct: 133 MYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDCAYSKMKFESGVHRVQRVPDTESS 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ V P VDD ++I+I +D R+D +RASG GGQ VNTTDSAVR+THIPTG+ Sbjct: 193 GRIHTSTATVAVLPEVDD-VDIQIDPNDIRVDVFRASGHGGQCVNTTDSAVRMTHIPTGI 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VV CQ E+SQ KNK +A +L+A+LYE +R A+I K+++G G +IR+Y Sbjct: 252 VVSCQDEKSQLKNKEKAMKVLKARLYEKAEAERS--ASISADRKSQVGTGDRSERIRTYN 309 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V + R + LDGD+++ + A + Sbjct: 310 Y-PQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALI 343 >gi|49531479|emb|CAG69191.1| peptide chain release factor 1 [Acinetobacter sp. ADP1] Length = 376 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/238 (43%), Positives = 147/238 (61%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N AYLEV AG GG E+ ++ L RMY+++AE R ++ E L ++GE G K + Sbjct: 121 DANAAYLEVRAGTGGDEAAIFSGDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRV 180 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P VD +EI+ +D RIDT Sbjct: 181 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDT 240 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITH+PTGVVV+CQ+ERSQHKNKA+A +L ++L + + Sbjct: 241 YRASGAGGQHINKTDSAVRITHVPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQ 300 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 301 ETATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 355 >gi|183598963|ref|ZP_02960456.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827] gi|188021179|gb|EDU59219.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827] Length = 360 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 151/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AGAGG E+ +A L RMY+R+AE +++ E + DGE G K I Sbjct: 107 DEYNCFLEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWRVELMSTSDGEHGGFKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E G HR+ R+ +S R HTS ++ + P + ++ EI+ +D RIDT Sbjct: 167 SGESVYGRLKFESGGHRVQRVPETESQGRIHTSACTVAILPELPEAELPEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + +G G +IR+Y P V D R N+ +V++G LD ++ Sbjct: 287 Q--AAEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|251789676|ref|YP_003004397.1| peptide chain release factor 1 [Dickeya zeae Ech1591] gi|247538297|gb|ACT06918.1| peptide chain release factor 1 [Dickeya zeae Ech1591] Length = 360 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/235 (44%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LE+ AG GG E+ +A L RMY+R+AE R++K E + DGE G K + Sbjct: 107 DERGCFLEIRAGTGGDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P V ++ +I+ +D RIDT Sbjct: 167 VGDGAYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G +IR+Y P V D R N+ + ++G LD Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEAIEGKLD 338 >gi|56965632|ref|YP_177366.1| peptide chain release factor 1 [Bacillus clausii KSM-K16] gi|61214582|sp|Q5WB55|RF1_BACSK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56911878|dbj|BAD66405.1| peptide chain release factor 1 [Bacillus clausii KSM-K16] Length = 356 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/335 (36%), Positives = 185/335 (55%), Gaps = 11/335 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALE 78 R +LN + DP++ N + + +E+ ++ + K++ ++L D +LE L+ Sbjct: 11 RYEYLNEQLSDPNVISNATKLREYSKEQAQIEETVQTYRQYKQVTEQLADAKAMLEEKLD 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANML 137 +D +++E D L K E+E + LL + D + +E+ AGG E+Q +A L Sbjct: 71 DDMYQMVKEELDELSERKAELEERLKILLLPKDPNDDKNVIVEIRGAAGGDEAQLFAADL 130 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +MY R+AE + +KTE +E H E G K ++ G AY LK E G HR+ R+ + Sbjct: 131 YKMYHRYAEMQGWKTEVIEAHATELGGYKEIIFMVNGSGAYSKLKYENGAHRVQRVPQTE 190 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ VNTT SAVR+TH+PT Sbjct: 191 SGGRIHTSTATVAVLPEAEE-VEIDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLPT 249 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 VV CQ E+SQ KNK +A +LRA++++ Q E A ES K +G G +IR+ Sbjct: 250 NTVVSCQDEKSQIKNKEKAMKVLRARIFDKVQQ--EAQAEYAESRKLAVGTGDRSERIRT 307 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 Y P V D R + VL G LD+ + A Sbjct: 308 YNF-PQSRVTDHRIGLTLQKLEQVLQGKLDEIIDA 341 >gi|242239290|ref|YP_002987471.1| peptide chain release factor 1 [Dickeya dadantii Ech703] gi|242131347|gb|ACS85649.1| peptide chain release factor 1 [Dickeya dadantii Ech703] Length = 361 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 123/329 (37%), Positives = 185/329 (56%), Gaps = 17/329 (5%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + ++ +ML RE L + + Q + D++ E+ L DD + + D Sbjct: 25 DPSIISDMDRFRMLSREYAQLTDITRCFQRWQ-QAQDDIATAEMLL--DDPEMREMAQDE 81 Query: 92 LQRIK-----LEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 L+ + LE + K LL + D +LE+ AG GG E+ +A L RMY+R+A Sbjct: 82 LKEAREAGDTLEQQLKVL--LLPRDPDDERGCFLEIRAGTGGDEAALFAGDLFRMYSRYA 139 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E R+++ E + DGE G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 140 ESRRWRVEMVSASDGEHGGYKEVIAKVIGEGAYGQLKFESGGHRVQRVPATESQGRIHTS 199 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ V P V ++ +I+ D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ Sbjct: 200 ACTVAVMPEVPEAELPDINPVDLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQD 259 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 ERSQHKNKA+A ++L A++ E+QKR++ + + +G G +IR+Y P Sbjct: 260 ERSQHKNKAKALSVLAARIRAAEMQKRQQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGR 316 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V D R N+ + ++G LD ++ + Sbjct: 317 VTDHRINLTLYRLDEAIEGKLDMLIQPIV 345 >gi|33591871|ref|NP_879515.1| peptide chain release factor 1 [Bordetella pertussis Tohama I] gi|33599373|ref|NP_886933.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50] gi|46576754|sp|Q7W023|RF1_BORPE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46576762|sp|Q7WQE9|RF1_BORBR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33566969|emb|CAE30882.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50] gi|33571515|emb|CAE40989.1| peptide chain release factor 1 [Bordetella pertussis Tohama I] gi|332381288|gb|AEE66135.1| peptide chain release factor 1 [Bordetella pertussis CS] Length = 360 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 126/339 (37%), Positives = 182/339 (53%), Gaps = 11/339 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 RL ++ +P ++ + L RER L+ + D E+ L + Sbjct: 13 AHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADVATAQEM-LSD 71 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANM 136 D + E R ++E E + LL D +D +LE+ AG GG ES ++ Sbjct: 72 PDMKAMAEDEIKTGRARIE-EMEAALQLLLLPRDPDDGRSLFLEIRAGTGGDESALFSGD 130 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMYTR+AE R ++ E + + E G K I G AYG LK E G HR+ R+ Sbjct: 131 LLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVPAT 190 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P D +I I+ SD RIDT+RASGAGGQH+N TDSAVRITH+P Sbjct: 191 EAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKTDSAVRITHVP 250 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV+CQ +RSQH+NK +A +L A+L + E+++R+ + K+ IG G +IR Sbjct: 251 TGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQ--SKEAAERKSLIGSGDRSERIR 308 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +Y P V D R N+ +++GDLD+ A LA Sbjct: 309 TYNY-PQGRVTDHRINLTLYKLQQIMEGDLDELTGALLA 346 >gi|239637411|ref|ZP_04678393.1| peptide chain release factor 1 [Staphylococcus warneri L37603] gi|239597011|gb|EEQ79526.1| peptide chain release factor 1 [Staphylococcus warneri L37603] Length = 358 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 126/346 (36%), Positives = 194/346 (56%), Gaps = 15/346 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD V+ R LN DP + + + + +E+ L + K ++ L D Sbjct: 1 MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 +L ++++ +L+E S +L+ E+E +Q + LL D D +E+ A AG Sbjct: 61 IEEMLNETSDKEEIEMLKEESSSLKNELPEME-EQLKLLLIPKDPNDEKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAHNFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G +IR+Y P V D R + S +L+G+LD+ + A Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLSQILEGNLDEIIDA 340 >gi|261343909|ref|ZP_05971554.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541] gi|282568295|gb|EFB73830.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541] Length = 360 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/244 (43%), Positives = 153/244 (62%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AGAGG E+ +A L RMY+R+AE +++ E + DGE G K I Sbjct: 107 DEYNCFVEIRAGAGGDEAAIFAGDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E G HR+ R+ +S R HTS +I V P + ++ EIS +D RIDT Sbjct: 167 SGDSVYGRLKFESGGHRVQRVPETESQGRIHTSACTIAVLPELPEAELPEISPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMAKR 286 Query: 293 EEIANIGESSKTE--IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E E+S+ +G G +IR+Y P V D R N+ +V++G LD + Sbjct: 287 HE----AEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLI 341 Query: 348 KATL 351 + + Sbjct: 342 QPII 345 >gi|326389251|ref|ZP_08210819.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW 200] gi|325994614|gb|EGD53038.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW 200] Length = 356 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/332 (36%), Positives = 192/332 (57%), Gaps = 10/332 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ K DP++ NV E + ++E +++ + +E + L D EL D+ Sbjct: 15 LSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKELLSSNDEELKE 74 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYT 142 + Q + + + + +L D ND +E+ AGAGG E+ +A+ L RMY+ Sbjct: 75 MAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAALFAHDLFRMYS 134 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 +AEK+ +K E + ++ + G K L I G AY LK E GVHR+ R+ ++ R Sbjct: 135 MYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQRVPTTEAGGRI 194 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS +++ V P V++ +++EI+ +D ++D +R+ G GGQ VNTTDSAVR+THIPTG+VV Sbjct: 195 HTSTATVAVLPEVEE-VDVEINPNDIKVDVFRSGGHGGQSVNTTDSAVRVTHIPTGIVVT 253 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 CQ ERSQ +N+ +A +LRAKLYE+ LQ+++ I E+ K+++G G +IR+Y P Sbjct: 254 CQDERSQIQNRERALKILRAKLYEMALQEQQR--EIAETRKSQVGTGERSERIRTYNF-P 310 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V D R + +VLDGDLD+ + A + Sbjct: 311 QGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342 >gi|288942095|ref|YP_003444335.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180] gi|288897467|gb|ADC63303.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180] Length = 359 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 111/265 (41%), Positives = 160/265 (60%), Gaps = 10/265 (3%) Query: 94 RIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 R +L+V + ++LL D ND A+LE+ AG GG E+ +A L+RMY R+AE + Sbjct: 86 RERLDVLEPELQTLLI-PPDPNDQCNAFLEIRAGTGGAEAALFAGDLMRMYMRYAELLGW 144 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 +TE + +GE G K + + G Y LK E G HR+ R+ +S R HTS ++ Sbjct: 145 RTEQVSASEGELGGYKEVVIRVSGSGVYSRLKFEPGAHRVQRVPETESQGRIHTSACTVA 204 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + IEI+ +D RIDTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQH Sbjct: 205 VLPEAESIDAIEINSNDLRIDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQH 264 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327 KN+A+A ++L AKL L + + + ES K ++G G +IR+Y P + D R Sbjct: 265 KNRAKAMSLLHAKL--LAGARETQASEQSESRKLQVGSGDRSERIRTYNF-PQNRLTDHR 321 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 N+ +V+ G LD ++ LA Sbjct: 322 INLTLYKLDEVMTGQLDQVIEPLLA 346 >gi|154248977|ref|YP_001409802.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1] gi|154152913|gb|ABS60145.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1] Length = 347 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/232 (46%), Positives = 149/232 (64%), Gaps = 7/232 (3%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + +LE+ AG GG E+ +A LLRMY R++E+ + TE ++ + G K + IKG Sbjct: 96 NVFLEIRAGTGGEEAALFAGDLLRMYLRYSERMGWSTEIIDESKSDLGGYKEVVVRIKGK 155 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 N+ ++K E+GVHR+ RI +S R HTS +++ V P + D +++ I D RIDTYRA Sbjct: 156 NSGTYMKYERGVHRVQRIPVTESGGRIHTSTATVAVLPEMKD-VDVYIDPKDIRIDTYRA 214 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQ+VN T+SA+RITHIPTG+VV CQ ERSQH+NK +A +LRAKLY EL ++E+ Sbjct: 215 SGAGGQYVNKTESAIRITHIPTGIVVTCQSERSQHQNKEKAMMVLRAKLY--ELARKEQD 272 Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + K +IG G +IR+Y P V D R N+ + VLDGDLD Sbjct: 273 EKLSSQRKNQIGSGERSEKIRTYNF-PQNRVTDHRINLTIYNLQAVLDGDLD 323 >gi|124265716|ref|YP_001019720.1| peptide chain release factor 1 [Methylibium petroleiphilum PM1] gi|166223569|sp|A2SD46|RF1_METPP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|124258491|gb|ABM93485.1| bacterial peptide chain release factor 1 (bRF-1) [Methylibium petroleiphilum PM1] Length = 359 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 134/364 (36%), Positives = 193/364 (53%), Gaps = 43/364 (11%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D V+RL+ L++ DP + ++ + L RE H++ +S I E Q R Sbjct: 7 LQLDRYVRRLAELDSLLADPAVMRDAGGFRALSRE--HVE--VSGIVERQRRHAQR---- 58 Query: 74 ELALEEDDCSILQETSD----------------NLQRIKLEVEYKQFESLLSGEADSNDA 117 E D + + SD L R+ E+ Q L D+ Sbjct: 59 ----ERDLAAAAEMASDPELAAMAAEEAASAQAELDRLATEL---QRLLLPRDPDDARSV 111 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 +LE+ AG GG ES +A LLRMYTR+AE++ ++ E L D E G K I+G Sbjct: 112 FLEIRAGTGGDESALFAGDLLRMYTRYAERKGWRVELLSASDSELGGYKEVVARIEGDAV 171 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 +G LK E G HR+ R+ ++ R HTS ++ V D++ E+ ++ +D RIDTYRASG Sbjct: 172 FGHLKYESGGHRVQRVPATETQGRIHTSACTVAVLAEPDEAQEVTLNPADLRIDTYRASG 231 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE---LELQKREE 294 AGGQHVN TDSAVRITH+PTG+V +CQ +RSQH+NKA+A +L A+L + LE Q RE Sbjct: 232 AGGQHVNKTDSAVRITHLPTGLVAECQDDRSQHRNKAKAMAVLAARLRDKDRLERQARE- 290 Query: 295 IANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K+ IG G +IR+Y P + D R N+ ++DGDLD +KA + Sbjct: 291 ----AATRKSLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYQLGAIMDGDLDPVVKALV 345 Query: 352 AIKK 355 A ++ Sbjct: 346 AARE 349 >gi|261855644|ref|YP_003262927.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2] gi|261836113|gb|ACX95880.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2] Length = 364 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 124/334 (37%), Positives = 177/334 (52%), Gaps = 11/334 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R LN DP + N + L +E L + + + Q D L E +E Sbjct: 15 ERYDELNALLSDPEVINNQDRFRSLSKEHARLHDLVVVLDRYQKAKAD-LQAAEHMSKEP 73 Query: 81 DCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 D + + ++ ++ E+E + L AD D LE+ AG GG E+ +A Sbjct: 74 DREMAALALEEMKELQTEIESLDEALKVHLLPHDPADDGDVILEIRAGTGGDEAAIFAGD 133 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY ++A+ + ++TE L GE G + I G Y LK E G HR+ R+ Sbjct: 134 LLRMYLKYADTQGWRTEILSEQPGEHGGYREVIAQISGDGVYAALKFESGAHRVQRVPTT 193 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V PVV +S I + S RIDT+RASGAGGQH+N TDSA+R+TH+P Sbjct: 194 ETQGRVHTSAATVAVMPVVPESEAITLDPSTLRIDTFRASGAGGQHINKTDSAIRVTHLP 253 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV+CQ ERSQHKNKA+A ++L A+L + E QK A + K +G G +IR Sbjct: 254 TGMVVECQDERSQHKNKARALSVLAARLADAERQKAH--AEQAATRKALVGSGDRSERIR 311 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +Y P V D R N+ VL GDLD + Sbjct: 312 TYNF-PQGRVTDHRINLTLYQLDRVLLGDLDPII 344 >gi|161349962|ref|YP_047013.2| peptide chain release factor 1 [Acinetobacter sp. ADP1] gi|61214614|sp|Q6F9S2|RF1_ACIAD RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 362 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/238 (43%), Positives = 147/238 (61%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N AYLEV AG GG E+ ++ L RMY+++AE R ++ E L ++GE G K + Sbjct: 107 DANAAYLEVRAGTGGDEAAIFSGDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P VD +EI+ +D RIDT Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITH+PTGVVV+CQ+ERSQHKNKA+A +L ++L + + Sbjct: 227 YRASGAGGQHINKTDSAVRITHVPTGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 287 ETATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341 >gi|297180269|gb|ADI16488.1| protein chain release factor a [uncultured bacterium HF4000_05M23] Length = 360 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 129/349 (36%), Positives = 189/349 (54%), Gaps = 23/349 (6%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + D + V+RL DP N I + L RE L + + +I D Sbjct: 12 IADRHSEVERLMSQPETASDP----NAI--RRLGREYSQLQHVVELWNDITRAQSDMEGA 65 Query: 73 LELALEEDDCSILQ-------ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 E+ EDD +L+ E + L + E+ + E L E + DA +EV AGA Sbjct: 66 REMLTAEDDAEVLEMAKVEVEELQERLDSLTAEI---RLELLPKDETELADAVVEVRAGA 122 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A + RMY R+AE RK+K + L +D GIK T I G AY L E Sbjct: 123 GGDEAGLFAAEVFRMYQRYAEARKWKLKILSQNDTGVGGIKEVTFEIAGERAYQRLHLES 182 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS +++ V P ++ ++IEIS+ D ++D Y +SGAGGQ VN Sbjct: 183 GVHRVQRVPATESQGRIHTSTATVVVMPKAEE-VDIEISDKDLKVDVYHSSGAGGQSVNK 241 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 +A+RITH+PTG+VVQCQ ERSQ +N+ QA +LR++L+++EL+K++E I + K + Sbjct: 242 LATAIRITHLPTGLVVQCQNERSQLQNRMQAMEILRSRLWDMELRKQQE--EISANRKAQ 299 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P + D R VL G+LD F+ A L Sbjct: 300 VGTGDRSEKIRTYNF-PQSRITDHRIGYTSHQMQQVLGGELDGFVDALL 347 >gi|51596331|ref|YP_070522.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP 32953] gi|81639458|sp|Q66AX5|RF1_YERPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|51589613|emb|CAH21243.1| peptide chain release factor RF-1 [Yersinia pseudotuberculosis IP 32953] Length = 360 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 105/237 (44%), Positives = 148/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K I Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 Q----LAEASERRNLLGTGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|119472532|ref|ZP_01614580.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium TW-7] gi|119444856|gb|EAW26156.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium TW-7] Length = 361 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 105/234 (44%), Positives = 149/234 (63%), Gaps = 6/234 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N+ +LEV AG GG E+ +A L RMY+R+AE +K+K E + ++GE G K I Sbjct: 109 DNNNVFLEVRAGTGGDEAAIFAGDLFRMYSRFAETQKWKLEVVTTNEGEHGGYKEVIANI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ +S R HTS ++ V + ++ IEI+ +D ++DT Sbjct: 169 SGEGVYGKLKFESGVHRVQRVPETESQGRVHTSACTVAVMAEIPEAEAIEINTADIKVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKN+A+A ++L A+L + E +KR Sbjct: 229 FRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKR 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 A + +G G +IR+Y P + D R N+ ++V+ GDL Sbjct: 289 H--AAEASERRNLVGSGDRSERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDL 339 >gi|257452575|ref|ZP_05617874.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R] gi|257466434|ref|ZP_05630745.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC 25563] gi|315917590|ref|ZP_07913830.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC 25563] gi|317059115|ref|ZP_07923600.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R] gi|313684791|gb|EFS21626.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R] gi|313691465|gb|EFS28300.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC 25563] Length = 359 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 111/246 (45%), Positives = 151/246 (61%), Gaps = 9/246 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLL 171 D N+ +E+ GAGG E+ +A L RMY R+AE++K+K E +E D E G+K Sbjct: 106 DDNNVIVEIRGGAGGDEAAIFAGDLFRMYCRYAERKKWKIEIIEKQDLEGLDGLKEVAFS 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G AY LK E GVHR+ R+ +S R HTS +++ V P V+D E+ I D +ID Sbjct: 166 IQGFGAYSKLKFESGVHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVHIDPKDLKID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+ GAGGQHVN TDSAVRITH+PTGV+VQCQ ERSQ KN+ +A L +KL E+E++K Sbjct: 226 TYRSGGAGGQHVNMTDSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEVEK 285 Query: 292 -REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 R EI GE + ++G G +IR+Y P + D R + LDGDLD+ + Sbjct: 286 QRSEIE--GE-RRLQVGTGDRAEKIRTYNF-PQGRITDHRIKLTVHQLEAFLDGDLDEMI 341 Query: 348 KATLAI 353 A + Sbjct: 342 DALITF 347 >gi|238751561|ref|ZP_04613052.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380] gi|238710279|gb|EEQ02506.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380] Length = 360 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K + Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAESRRWKVEIMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGEGVFGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 Q----LAEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|307244007|ref|ZP_07526126.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM 17678] gi|306492531|gb|EFM64565.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM 17678] Length = 354 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 117/286 (40%), Positives = 169/286 (59%), Gaps = 20/286 (6%) Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSG----------EADSND---AYLEVHAGAGGTES 130 IL+E SD R ++E + E+LL D ND +E+ GAGG E+ Sbjct: 64 ILEEESDEDLRELAKMELSESEALLEEYENELKILLVPKDPNDEKNVIIEIRGGAGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE+R +KT + ++ G K + +IKG AY LK E GVHR+ Sbjct: 124 ALFAGDLFRMYSRYAERRGWKTSLMSSNETGVGGYKEVSFMIKGKGAYSRLKYESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +S R HTS +++ V P V+D +EI+I+ D R+D +RASG GGQ VNTTDSAV Sbjct: 184 QRIPTTESGGRIHTSTATVAVLPEVED-VEIDINPEDVRVDVFRASGNGGQCVNTTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+THIPTG VV CQ E+SQ KNK +A +L+A+LY+ L ++++ +I K+++G G Sbjct: 243 RLTHIPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALAEQQK--DIAAERKSQVGTGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IR+Y P V D R N+ +DGDLD+ + A + + Sbjct: 301 RSERIRTYNF-PQGRVSDHRINLTLYKLDSFIDGDLDEMIDALITV 345 >gi|121534882|ref|ZP_01666701.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1] gi|121306481|gb|EAX47404.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1] Length = 356 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 119/303 (39%), Positives = 173/303 (57%), Gaps = 19/303 (6%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109 Q +D+A +KE D ++ ELA + C ++LE E + L Sbjct: 56 QGMDDAREMLKEKLDDDFREMVEAELAELKAKC------------VRLEEELRIL-MLPK 102 Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D + +E+ AGAGG E+ +A L RMYTR+AE + ++ E L+ + + G K Sbjct: 103 DPNDEKNVIIEIRAGAGGDEAALFAGDLFRMYTRYAEAQGWRVELLDANSSDLGGFKEVV 162 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 I+G AY K E GVHR+ R+ +++ R HTS ++ V P DD ++ I+ SD R Sbjct: 163 FSIQGDGAYSRFKYESGVHRVQRVPETEASGRIHTSTVTVAVLPEADDVDDVVINPSDLR 222 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDTY ASGAGGQHVN T+SAVRITH+PTG+VVQCQ E+SQ KN+ +A +LRAKL LE Sbjct: 223 IDTYCASGAGGQHVNKTESAVRITHLPTGIVVQCQDEKSQIKNREKAMRVLRAKL--LEA 280 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + E+ A + ++ K+++G G +IR+Y P V D R + +L+GDLD+ Sbjct: 281 AQEEQRAQLAQTRKSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHKLDFILNGDLDEL 339 Query: 347 MKA 349 + A Sbjct: 340 INA 342 >gi|87122989|ref|ZP_01078849.1| peptide chain release factor 1 [Marinomonas sp. MED121] gi|86161726|gb|EAQ63031.1| peptide chain release factor 1 [Marinomonas sp. MED121] Length = 363 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++EV AG GG E+ +A L RMY+R+AE +++K E + ++GE G K I Sbjct: 109 DGRNVFVEVRAGTGGDEASIFAGDLFRMYSRYAETQRWKVELISCNEGEHGGYKEVIARI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +S R HTS ++ + P +D+ IEI+++D R+DT Sbjct: 169 VGEGAYSLLKFESGVHRVQRVPATESQGRIHTSACTVAIMPEMDEQDAIEINKADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+R+THIPTGVVV+CQ ERSQHKN+A+A +L ++L E +K Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMALLASRLQAAEEEKH 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + E+ K+ +G G +IR+Y P V D R N+ +++ GDLD+ ++ Sbjct: 289 AAEQS--ETRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDEIITGDLDNLVQP 345 Query: 350 TL 351 + Sbjct: 346 LI 347 >gi|225628073|ref|ZP_03786108.1| peptide chain release factor 1 [Brucella ceti str. Cudo] gi|261220926|ref|ZP_05935207.1| peptide chain release factor 1 [Brucella ceti B1/94] gi|225616898|gb|EEH13945.1| peptide chain release factor 1 [Brucella ceti str. Cudo] gi|260919510|gb|EEX86163.1| peptide chain release factor 1 [Brucella ceti B1/94] Length = 377 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 53 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 109 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 169 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 344 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 345 KLDRVMEGDLDELVDALIS 363 >gi|23015680|ref|ZP_00055449.1| COG0216: Protein chain release factor A [Magnetospirillum magnetotacticum MS-1] Length = 354 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 115/280 (41%), Positives = 169/280 (60%), Gaps = 14/280 (5%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 L E++ L+E L+R EV Q L EAD +A +EV AG GG E+ +A Sbjct: 74 LAEEEFYALKERLPALER---EV---QIMLLPKDEADEKNAIIEVRAGTGGEEAALFAAE 127 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY R+A ++ E ++++D G+K A+ I G N + LK E GVHR+ R+ Sbjct: 128 LFRMYERYASVHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVPAT 187 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ + P ++ ++I++++SD R D YR+ G+GGQ VNTTDSAVR+THIP Sbjct: 188 ESQGRIHTSAATVAIMPEAEE-VDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTHIP 246 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+ V CQQE+SQHKNKA A +LRA+LYE E ++ A + K+++G G +IR Sbjct: 247 TGLAVACQQEKSQHKNKATALKLLRARLYERERSAKD--AERAAARKSQVGSGDRSERIR 304 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 +Y P V D R N+ V+ GD LD+ ++A +A Sbjct: 305 TYNF-PQGRVTDHRINLTLYKIDAVMSGDALDELIEALVA 343 >gi|170728014|ref|YP_001762040.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908] gi|238688639|sp|B1KDU3|RF1_SHEWM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169813361|gb|ACA87945.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908] Length = 361 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 123/345 (35%), Positives = 197/345 (57%), Gaps = 23/345 (6%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L GL + + V L+ L+ DP + + + L +E L++ + Q + ++ Sbjct: 9 LEGLLERNEEV--LALLS----DPSVIADQERFRALSKEYSQLEDVVKSFTAFQ-QATED 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLL--SGEADSNDAYLEVHAGA 125 L + L EDD + + + ++ K LE + + LL D N+A++E+ AGA Sbjct: 62 LEAAKEMLNEDDPELKEMAQEEMKEAKSVLETLEDELQILLLPKDPNDDNNAFIEIRAGA 121 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY++++E +++ E + ++GE G K I G YG LK E Sbjct: 122 GGDEAAIFAGDLFRMYSKYSESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFES 181 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS ++ V P + ++ IEI+++D ++DT+RASGAGGQHVN Sbjct: 182 GGHRVQRVPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQHVNK 241 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESSK 303 TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR EE ES++ Sbjct: 242 TDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEE-----ESTR 296 Query: 304 TEI----GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + +IR+Y P + D R N+ ++V++G LD Sbjct: 297 RNLVSSGDRSERIRTYNF-PQGRMSDHRINLTLYRLNEVMEGVLD 340 >gi|226492409|ref|NP_001142228.1| hypothetical protein LOC100274396 [Zea mays] gi|194707706|gb|ACF87937.1| unknown [Zea mays] Length = 416 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 114/261 (43%), Positives = 163/261 (62%), Gaps = 15/261 (5%) Query: 99 VEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 ++++ F SLL EAD D LEV AG GG E+ +A + RMY ++A+K +K + ++I Sbjct: 150 LQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDI 209 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 + G K A+ I GP A+G LK E G+HR+ R+ + + R HTS S+ V P D+ Sbjct: 210 MESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADE 269 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D RIDTYR+ G+GGQ VNTTDSAVRITHIPTG VV Q ERSQH NKA+A Sbjct: 270 -VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKAL 328 Query: 278 NMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 +LRA+LYELE ++ R ++ + IG ++E +IR+Y P V D R + Sbjct: 329 KVLRARLYELERRRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGVT 382 Query: 332 KTSPSDVLDGD-LDDFMKATL 351 S +DV++G+ LD F+ A L Sbjct: 383 HHSIADVMEGESLDMFVDALL 403 >gi|239947714|ref|ZP_04699467.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes scapularis] gi|239921990|gb|EER22014.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes scapularis] Length = 355 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 134/349 (38%), Positives = 201/349 (57%), Gaps = 29/349 (8%) Query: 16 WDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 ++N ++LS F+ E L V + K + + L+ A +F E+ D Sbjct: 14 YENLGKKLSSGIMGDEFVKASKEYAELKDVVAKIKEYNKAKSELEEANNFKLEVG---LD 70 Query: 69 NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 N L + ED+ L+ + L+R +K+ + L +ADS A +EV AG+GG Sbjct: 71 NATL---EMIEDEIHTLENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L MY R+AE + ++ E L I D G K A+ LIKG + + LK E GV Sbjct: 121 EEAALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ ++I+I + D +IDTYRASGAGGQHVNTTD Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAEE-VDIKIEDKDLKIDTYRASGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPT + V Q E+SQHKNKA+A +LRA++YE E +K+E +S + ++G Sbjct: 240 SAVRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 G +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|319407578|emb|CBI81228.1| peptide chain release factor 1 [Bartonella sp. 1-1C] Length = 359 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD +E+ AG GG+E+ +A L RMY R+A +K E + + DGE G K Sbjct: 107 ADEKSVIIEIRAGTGGSEAALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ RI ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ISGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIEIRSEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E + S KT++G G +IR+Y P V D R N+ +++GDL++ + Sbjct: 285 AE--SERSASRKTQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELIN 341 Query: 349 ATLA 352 A ++ Sbjct: 342 ALIS 345 >gi|241116888|ref|XP_002401657.1| protein releasing factor, putative [Ixodes scapularis] gi|215493201|gb|EEC02842.1| protein releasing factor, putative [Ixodes scapularis] Length = 358 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 134/349 (38%), Positives = 201/349 (57%), Gaps = 29/349 (8%) Query: 16 WDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 ++N ++LS F+ E L V + K + + L+ A +F E+ D Sbjct: 17 YENLGKKLSSGIMGDEFVKASKEYAELKDVVAKIKEYNKAKSELEEANNFKLEVG---LD 73 Query: 69 NLILLELALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 N L + ED+ L+ + L+R +K+ + L +ADS A +EV AG+GG Sbjct: 74 NATL---EMIEDEIHTLENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L MY R+AE + ++ E L I D G K A+ LIKG + + LK E GV Sbjct: 124 EEAALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ ++I+I + D +IDTYRASGAGGQHVNTTD Sbjct: 184 HRVQRVPETESQGRIHTSAATVAVLPEAEE-VDIKIEDKDLKIDTYRASGAGGQHVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPT + V Q E+SQHKNKA+A +LRA++YE E +K+E +S + ++G Sbjct: 243 SAVRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVG 300 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 G +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 301 SGDRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 348 >gi|256158374|ref|ZP_05456272.1| peptide chain release factor 1 [Brucella ceti M490/95/1] gi|256253793|ref|ZP_05459329.1| peptide chain release factor 1 [Brucella ceti B1/94] gi|260169300|ref|ZP_05756111.1| peptide chain release factor 1 [Brucella sp. F5/99] gi|261758813|ref|ZP_06002522.1| peptide chain release factor 1 [Brucella sp. F5/99] gi|261738797|gb|EEY26793.1| peptide chain release factor 1 [Brucella sp. F5/99] Length = 359 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 35 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 92 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 327 KLDRVMEGDLDELVDALIS 345 >gi|242089427|ref|XP_002440546.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor] gi|241945831|gb|EES18976.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor] Length = 416 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 115/261 (44%), Positives = 162/261 (62%), Gaps = 15/261 (5%) Query: 99 VEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 ++++ F SLL EAD D LEV AG GG E+ +A + RMY ++A+K +K + ++I Sbjct: 150 LQHELFRSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDI 209 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 + G K A+ I GP A+G LK E G+HR+ R+ + + R HTS S+ V P D+ Sbjct: 210 MESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAVLPQADE 269 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D RIDTYR+ G+GGQ VNTTDSAVRITHIPTG VV Q ERSQH NKA+A Sbjct: 270 -VDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKAL 328 Query: 278 NMLRAKLYELELQK----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 +LRA+LYELE + R ++ + IG ++E +IR+Y P V D R I Sbjct: 329 KVLRARLYELERHRLHMDRSKLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGIT 382 Query: 332 KTSPSDVLDGD-LDDFMKATL 351 S +DV++G+ LD F+ A L Sbjct: 383 HHSIADVMEGESLDVFVDALL 403 >gi|83319336|ref|YP_424135.1| peptide chain release factor 1 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|90110051|sp|P71496|RF1_MYCCT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83283222|gb|ABC01154.1| peptide chain release factor 1 [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 363 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 126/345 (36%), Positives = 192/345 (55%), Gaps = 25/345 (7%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELAL 77 +RL + ED ++ +++ + L +E+ +L+ + F+ K+ D + D +LE Sbjct: 14 KRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAILE--- 70 Query: 78 EEDDCSILQ-------ETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTE 129 E D +++ E +D ++ ++ +E E LL + D + +E+ AGG E Sbjct: 71 NEKDSELIELAKIELDENNDKVEHLQQVIE----EMLLPKDPNDEKNVIIEIRGAAGGDE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY +AE + +K LE GE G +IKG Y LK E G HR Sbjct: 127 ANIFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R TS +++ V P + + +EIEI +D RIDTYRASGAGGQHVNTTDSA Sbjct: 187 VQRVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV Q RSQH NK A MLRAK+YE E++K++ A + K +G G Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQ--AQADATRKNAVGTG 303 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + V++G++D+F+ A + Sbjct: 304 ARSEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALI 347 >gi|15892685|ref|NP_360399.1| peptide chain release factor 1 [Rickettsia conorii str. Malish 7] gi|20139335|sp|Q92HK9|RF1_RICCN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|15619858|gb|AAL03300.1| peptide chain release factor RF-1 [Rickettsia conorii str. Malish 7] Length = 355 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 193/333 (57%), Gaps = 22/333 (6%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 F+ E L V + K + + L+ A +F E+ DN L + ED+ Sbjct: 30 FVKASKEYAELEDVVAKIKEYNKAKSELEEANNFKLEVG---LDNATL---EMIEDEIYT 83 Query: 85 LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L+ + L+R +K+ + L +ADS A +EV AG+GG E+ +A +L MY R Sbjct: 84 LENSLPKLERAVKIAL-------LPKDDADSKSAIIEVRAGSGGEEAALFAAVLFNMYQR 136 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE + + E L I D G K A+ IKG + + LK E GVHR+ R+ +S R H Sbjct: 137 YAELKGWHFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRVPETESQGRIH 196 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ V P ++ ++I+I + D RIDTYRASGAGGQHVNTTDSAVRITHIPTG+ V Sbjct: 197 TSAATVAVLPEAEE-VDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVAL 255 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q E+SQHKNKA+A +LRA++YE E +K+E +S + ++G G +IR+Y P Sbjct: 256 QDEKSQHKNKAKALKILRARIYEEERRKKE--QERADSRRGQVGSGDRSERIRTYNF-PQ 312 Query: 321 QMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 V D R N+ +V+ +G LD+F++A +A Sbjct: 313 GRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|71065612|ref|YP_264339.1| peptide chain release factor 1 [Psychrobacter arcticus 273-4] gi|119361583|sp|Q4FSV3|RF1_PSYA2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71038597|gb|AAZ18905.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter arcticus 273-4] Length = 362 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 113/294 (38%), Positives = 173/294 (58%), Gaps = 17/294 (5%) Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHA 123 D +L+ A + D ++QE D+ + +E+E +L D ND A+LE+ A Sbjct: 63 ADAEAMLKEASDPDMKEMMQEEIDSARDTIVEMEEALNVMMLP--KDPNDKVPAFLEIRA 120 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ ++ L RMY ++A+ + + E L ++GE G K + G + YG LK Sbjct: 121 GTGGDEAAIFSGDLFRMYQKYAQAQGWTLEVLSANEGEHGGYKEIITRVSGNSVYGRLKF 180 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ +S R HTS ++ V P V+ + ++ +D R DT+R+SGAGGQHV Sbjct: 181 ESGVHRVQRVPDTESQGRVHTSACTVAVMPEVEIDDTVNLNPADIRFDTFRSSGAGGQHV 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN------ 297 NTTDSAVR+THIPTG VV+CQQERSQHKN+AQA ML +K+ ++++Q + + A+ Sbjct: 241 NTTDSAVRLTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTIRRDL 300 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G ++E +IR+Y P + D R N+ +++GDLD+ + A L Sbjct: 301 VGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDSIMEGDLDEILDALL 348 >gi|187476811|ref|YP_784835.1| peptide chain release factor 1 [Bordetella avium 197N] gi|115421397|emb|CAJ47902.1| peptide chain release factor 1 [Bordetella avium 197N] Length = 356 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 184/339 (54%), Gaps = 11/339 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 RL ++ DP ++ + L RER L+ + Q D E+ L + Sbjct: 9 AHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQEM-LAD 67 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANM 136 + + E R ++EV + + LL D ND +LE+ AG GG ES ++ Sbjct: 68 PEMKAMAEEEIKAARERIEVLEGELQVLLLPR-DPNDGRSLFLEIRAGTGGDESALFSGD 126 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY+R+AE + ++ E + E G K I G AYG LK E G HR+ R+ Sbjct: 127 LLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVPAT 186 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P D+ +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH+P Sbjct: 187 EAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAVRITHLP 246 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV+CQ +RSQH+NK +A +L A+L + EL++R+ + K+ +G G +IR Sbjct: 247 TGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQ--SKEAAERKSLVGSGDRSERIR 304 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +Y P V D R N+ +L+GDL++ A LA Sbjct: 305 TYNY-PQGRVTDHRINLTLYKLQQILEGDLNELTGALLA 342 >gi|265996886|ref|ZP_06109443.1| peptide chain release factor 1 [Brucella ceti M490/95/1] gi|262551354|gb|EEZ07344.1| peptide chain release factor 1 [Brucella ceti M490/95/1] Length = 372 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 48 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 104 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 105 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 164 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 165 ASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 224 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 225 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 282 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 283 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 339 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 340 KLDRVMEGDLDELVDALIS 358 >gi|319899228|ref|YP_004159321.1| peptide chain release factor 1 [Bartonella clarridgeiae 73] gi|319403192|emb|CBI76751.1| peptide chain release factor 1 [Bartonella clarridgeiae 73] Length = 357 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD +E+ AG GG+E+ +A L RMY R+A +K E + + DGE G K Sbjct: 107 ADEKSVIIEIRAGTGGSEAALFAGNLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ RI ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ISGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E + S KT++G G +IR+Y P V D R N+ +++GDL++ + Sbjct: 285 AE--SERSASRKTQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELIN 341 Query: 349 ATLA 352 A ++ Sbjct: 342 ALIS 345 >gi|295394649|ref|ZP_06804868.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC 49030] gi|294972542|gb|EFG48398.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC 49030] Length = 359 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 126/322 (39%), Positives = 181/322 (56%), Gaps = 8/322 (2%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P + N A+ L R LD +E+ L D ELA E D + +E Sbjct: 28 NPDVHANAGLARKLTRRYSELDQIAKTYRELNQCLSDVEDAKELASE--DPAFAEEAKSL 85 Query: 92 LQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 +RI++ ++ K E L+ + D + DA +EV AG GG ES +A L+RMY RWA+ R + Sbjct: 86 EERIEV-LQDKLRELLIPKDPDDARDAIIEVKAGEGGDESALFAGDLVRMYQRWADHRGW 144 Query: 151 KTEALEIHDGEEAGIKSATLLIKG--PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 TE L+ + G K T+ IK YGWLK E GVHR+ R+ +S R HTS + Sbjct: 145 STEVLDSTEANLGGYKDITIAIKSREGGVYGWLKFEGGVHRVQRVPVTESQGRIHTSAAG 204 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V+P VD+ EI++ ++D +ID YR+SG GGQ VNTTDSAVRITH+PTG+V CQ E+S Sbjct: 205 VLVFPEVDEPEEIQLDDNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVASCQNEKS 264 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 Q +NK A MLRA++ + ++ AN + S + +IR+Y P + D R Sbjct: 265 QLQNKEAAMRMLRARILAKQAEEAAAEANDMRRSQVRTVDRSERIRTYNF-PENRIVDHR 323 Query: 328 TNIEKTSPSDVLDGDLDDFMKA 349 T + + VLDG LDD +++ Sbjct: 324 TGFKAYNLDQVLDGRLDDVVES 345 >gi|238763000|ref|ZP_04623967.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638] gi|238698758|gb|EEP91508.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638] Length = 360 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K + Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 Q----LAEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|212636630|ref|YP_002313155.1| peptide chain release factor 1 [Shewanella piezotolerans WP3] gi|226739120|sp|B8CQV2|RF1_SHEPW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|212558114|gb|ACJ30568.1| Peptide chain release factor 1 [Shewanella piezotolerans WP3] Length = 361 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 111/307 (36%), Positives = 177/307 (57%), Gaps = 7/307 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L++ + K Q + ++L + +EEDD + + + + K +E Sbjct: 36 RALSKEYSQLEDVVKAFKSFQ-QAEEDLESAKEMMEEDDAELKEMAQEEYKAAKETIETL 94 Query: 103 QFES----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E L D N+ ++E+ AGAGG E+ +A L RMY+++AE +++ E + + Sbjct: 95 ESELQILLLPKDPNDDNNCFIEIRAGAGGDEAAIFAGDLFRMYSKYAESNRWQIEVMNTN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K I G YG LK E G HR+ R+ +S R HTS ++ V P + ++ Sbjct: 155 EGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQRVPETESQGRVHTSACTVIVLPEIPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEI+++D ++DT+RASGAGGQHVN TDSA+RITHIPTG+VV+CQ +RSQHKN+AQA + Sbjct: 215 EAIEINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ +E +KR + + G +IR+Y P V + R N+ + Sbjct: 275 VLSARIQAVEDEKRRSEEDSTRRNLVSSGDRSERIRTYNF-PQGRVSEHRINLTLYRLGE 333 Query: 338 VLDGDLD 344 ++GD+D Sbjct: 334 FMEGDID 340 >gi|294635783|ref|ZP_06714243.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685] gi|291090883|gb|EFE23444.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685] Length = 360 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K + Sbjct: 107 DERNCFLEVRAGTGGDEAGLFAGDLFRMYSRYAEARRWRIEVMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P V ++ +I+ +D RIDT Sbjct: 167 SGEGAYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPQINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 YRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + +G G +IR+Y P V D R N+ +V++G LD ++ Sbjct: 287 QR--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDSLIEP 343 Query: 350 TL 351 + Sbjct: 344 IV 345 >gi|623028|emb|CAA55563.1| unnamed protein product [Coxiella burnetii] Length = 361 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 102/238 (42%), Positives = 147/238 (61%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY R+AE + ++ + H+GE G K + Sbjct: 109 DERNVFLEIRAGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ + P VD+ +I+I+ ++ RIDT Sbjct: 169 IGEGVYSQLKFESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKNKA+A ++L++KL E K+ Sbjct: 229 FRASGAGGQHVNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++ K+ +G G +IR+Y P V D R N+ +V++GDLD + Sbjct: 289 DQ--EQAAKRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVI 343 >gi|225023585|ref|ZP_03712777.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC 23834] gi|224943680|gb|EEG24889.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC 23834] Length = 358 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 109/245 (44%), Positives = 151/245 (61%), Gaps = 6/245 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D + +LEV AG GG E+ +A LLRMYTR+AE+ +++ E + ++ + G K Sbjct: 105 EDDGKNIFLEVRAGTGGDEAALFAADLLRMYTRYAERNRWQVEIVSANESDLGGYKEVIA 164 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AYG LK E G HR+ R+ +S R HTS ++ V P D+ EI+++ ++ RI Sbjct: 165 RIAGIGAYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPAELRI 224 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT+RASGAGGQH+N TDSA+RITH+PTG+VV+CQ RSQH NKAQA +L A+L + Q Sbjct: 225 DTFRASGAGGQHINKTDSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN--DKQ 282 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 KRE A K+ IG G +IR+Y P V D R N+ V+DGD+++ Sbjct: 283 KREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEIT 341 Query: 348 KATLA 352 A +A Sbjct: 342 NALIA 346 >gi|119361511|sp|Q2KZZ3|RF1_BORA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 360 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 184/339 (54%), Gaps = 11/339 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 RL ++ DP ++ + L RER L+ + Q D E+ L + Sbjct: 13 AHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQEM-LAD 71 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANM 136 + + E R ++EV + + LL D ND +LE+ AG GG ES ++ Sbjct: 72 PEMKAMAEEEIKAARERIEVLEGELQVLLLPR-DPNDGRSLFLEIRAGTGGDESALFSGD 130 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY+R+AE + ++ E + E G K I G AYG LK E G HR+ R+ Sbjct: 131 LLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVPAT 190 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P D+ +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH+P Sbjct: 191 EAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAVRITHLP 250 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV+CQ +RSQH+NK +A +L A+L + EL++R+ + K+ +G G +IR Sbjct: 251 TGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQ--SKEAAERKSLVGSGDRSERIR 308 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +Y P V D R N+ +L+GDL++ A LA Sbjct: 309 TYNY-PQGRVTDHRINLTLYKLQQILEGDLNELTGALLA 346 >gi|254428729|ref|ZP_05042436.1| peptide chain release factor 1 [Alcanivorax sp. DG881] gi|196194898|gb|EDX89857.1| peptide chain release factor 1 [Alcanivorax sp. DG881] Length = 361 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 125/343 (36%), Positives = 180/343 (52%), Gaps = 11/343 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D R L DP + N + + L RE +D + + + DNL Sbjct: 10 DKLADRFEELAGLLSDPDVIGNQNQFRDLSREYAEIDPVVKCYQAYL-QAADNLDAARAM 68 Query: 77 LEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++ D + +E D R++ E Q L D + +LEV AG GG E+ Sbjct: 69 QDDSDPDMREMGAEEARDAQARMEELAEELQKLMLPKDPRDGANVFLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++A++R +K E + +GE G K + G Y +K E G HR+ R Sbjct: 129 FAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + + +I I D RIDTYR+SGAGGQHVNTTDSAVRI Sbjct: 189 VPATESQGRIHTSACTVAIMAEAEQLGDITIRNEDLRIDTYRSSGAGGQHVNTTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKNKA+A ++L AKLY + Q+ A K+ +G G Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLSAKLY--DAQQNAAHAEQAAERKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ ++++GD+D+ + A LA Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLGELMEGDMDELLGALLA 348 >gi|73667064|ref|YP_303080.1| peptide chain release factor 1 [Ehrlichia canis str. Jake] gi|119361538|sp|Q3YS23|RF1_EHRCJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|72394205|gb|AAZ68482.1| bacterial peptide chain release factor 1 (bRF-1) [Ehrlichia canis str. Jake] Length = 359 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 106/244 (43%), Positives = 157/244 (64%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A LE+ AG GG E+ + L RMYT++AE++ +K E + G K +L I Sbjct: 108 DARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEVSLCI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N + LK E GVHR+ R+ +++ R HTS +++ V P +++ ++++I E D RID Sbjct: 168 SGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIEE-VDLKIDEKDLRIDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVRITHIP+G+VV Q E+SQHKNK +A +LRA+LY LE QKR Sbjct: 227 YRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYNLEKQKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMK 348 + + I + K++IG G +IR+Y P + D R N+ D++ +G+LD+F+ Sbjct: 287 D--SEISQMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLYRLEDIMKEGNLDEFID 343 Query: 349 ATLA 352 A +A Sbjct: 344 ALIA 347 >gi|238788553|ref|ZP_04632346.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641] gi|238723466|gb|EEQ15113.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641] Length = 360 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K + Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 Q----LAEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|163843895|ref|YP_001628299.1| peptide chain release factor 1 [Brucella suis ATCC 23445] gi|189039961|sp|B0CIC3|RF1_BRUSI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|163674618|gb|ABY38729.1| peptide chain release factor 1 [Brucella suis ATCC 23445] Length = 359 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 35 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 92 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 152 ASEGDAGGYKEIITTVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 327 KLDRVMEGDLDELVDALIS 345 >gi|62290730|ref|YP_222523.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. 9-941] gi|82700642|ref|YP_415216.1| peptide chain release factor 1 [Brucella melitensis biovar Abortus 2308] gi|189024940|ref|YP_001935708.1| peptide chain release factor 1 [Brucella abortus S19] gi|254694507|ref|ZP_05156335.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya] gi|254696132|ref|ZP_05157960.1| peptide chain release factor 1 [Brucella abortus bv. 2 str. 86/8/59] gi|254707598|ref|ZP_05169426.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10] gi|256258272|ref|ZP_05463808.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68] gi|260545992|ref|ZP_05821732.1| peptide chain release factor 1 [Brucella abortus NCTC 8038] gi|260760500|ref|ZP_05872843.1| peptide chain release factor 1 [Brucella abortus bv. 2 str. 86/8/59] gi|261214824|ref|ZP_05929105.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya] gi|261315085|ref|ZP_05954282.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10] gi|75496230|sp|Q57B22|RF1_BRUAB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361513|sp|Q2YLN8|RF1_BRUA2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238689404|sp|B2S825|RF1_BRUA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|62196862|gb|AAX75162.1| PrfA, peptide chain release factor 1 [Brucella abortus bv. 1 str. 9-941] gi|82616743|emb|CAJ11828.1| Class I peptide chain release factor domain:Peptide chain release factor 1:PCRF domain [Brucella melitensis biovar Abortus 2308] gi|189020512|gb|ACD73234.1| Class I peptide chain release factor domain protein [Brucella abortus S19] gi|260096099|gb|EEW79975.1| peptide chain release factor 1 [Brucella abortus NCTC 8038] gi|260670932|gb|EEX57753.1| peptide chain release factor 1 [Brucella abortus bv. 2 str. 86/8/59] gi|260916431|gb|EEX83292.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya] gi|261304111|gb|EEY07608.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10] Length = 359 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 35 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 92 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 327 KLDRVMEGDLDELVDALIS 345 >gi|29655248|ref|NP_820940.1| peptide chain release factor 1 [Coxiella burnetii RSA 493] gi|154706179|ref|YP_001425370.1| peptide chain release factor 1 [Coxiella burnetii Dugway 5J108-111] gi|161830069|ref|YP_001596008.1| peptide chain release factor 1 [Coxiella burnetii RSA 331] gi|165924041|ref|ZP_02219873.1| peptide chain release factor 1 [Coxiella burnetii RSA 334] gi|212219474|ref|YP_002306261.1| peptide chain release factor 1 [Coxiella burnetii CbuK_Q154] gi|30581025|sp|P47849|RF1_COXBU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039967|sp|A9KGY3|RF1_COXBN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039968|sp|A9N9K2|RF1_COXBR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238058710|sp|B6J625|RF1_COXB1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|29542520|gb|AAO91454.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii RSA 493] gi|154355465|gb|ABS76927.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii Dugway 5J108-111] gi|161761936|gb|ABX77578.1| peptide chain release factor 1 [Coxiella burnetii RSA 331] gi|165916526|gb|EDR35130.1| peptide chain release factor 1 [Coxiella burnetii RSA 334] gi|212013736|gb|ACJ21116.1| bacterial Peptide Chain Release Factor 1 (RF-1) [Coxiella burnetii CbuK_Q154] Length = 361 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 102/238 (42%), Positives = 147/238 (61%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY R+AE + ++ + H+GE G K + Sbjct: 109 DERNVFLEIRAGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ + P VD+ +I+I+ ++ RIDT Sbjct: 169 IGEGVYSQLKFESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKNKA+A ++L++KL E K+ Sbjct: 229 FRASGAGGQHVNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++ K+ +G G +IR+Y P V D R N+ +V++GDLD + Sbjct: 289 DQ--EQAAKRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVI 343 >gi|148558947|ref|YP_001259697.1| peptide chain release factor 1 [Brucella ovis ATCC 25840] gi|265987430|ref|ZP_06099987.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1] gi|148370204|gb|ABQ60183.1| peptide chain release factor 1 [Brucella ovis ATCC 25840] gi|264659627|gb|EEZ29888.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1] Length = 377 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 53 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 109 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 169 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 344 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 345 KLDRVMEGDLDELVDALIS 363 >gi|22126175|ref|NP_669598.1| peptide chain release factor 1 [Yersinia pestis KIM 10] gi|45441669|ref|NP_993208.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus str. 91001] gi|108807397|ref|YP_651313.1| peptide chain release factor 1 [Yersinia pestis Antiqua] gi|108811662|ref|YP_647429.1| peptide chain release factor 1 [Yersinia pestis Nepal516] gi|145598396|ref|YP_001162472.1| peptide chain release factor 1 [Yersinia pestis Pestoides F] gi|149366051|ref|ZP_01888086.1| peptide chain release factor 1 [Yersinia pestis CA88-4125] gi|153947351|ref|YP_001401039.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP 31758] gi|162421626|ref|YP_001606878.1| peptide chain release factor 1 [Yersinia pestis Angola] gi|165926418|ref|ZP_02222250.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. F1991016] gi|165938830|ref|ZP_02227384.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. IP275] gi|166009117|ref|ZP_02230015.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. E1979001] gi|166210440|ref|ZP_02236475.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. B42003004] gi|167401373|ref|ZP_02306870.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420420|ref|ZP_02312173.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424382|ref|ZP_02316135.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024410|ref|YP_001720915.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII] gi|186895374|ref|YP_001872486.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+] gi|218929128|ref|YP_002347003.1| peptide chain release factor 1 [Yersinia pestis CO92] gi|229894728|ref|ZP_04509908.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A] gi|229897428|ref|ZP_04512584.1| peptide chain release factor RF-1 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898071|ref|ZP_04513222.1| peptide chain release factor RF-1 [Yersinia pestis biovar Orientalis str. India 195] gi|229901940|ref|ZP_04517061.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516] gi|270490877|ref|ZP_06207951.1| peptide chain release factor 1 [Yersinia pestis KIM D27] gi|294503912|ref|YP_003567974.1| peptide chain release factor 1 [Yersinia pestis Z176003] gi|20139332|sp|Q8ZEX8|RF1_YERPE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361639|sp|Q1C854|RF1_YERPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361640|sp|Q1CJK1|RF1_YERPN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223619|sp|A4TJN7|RF1_YERPP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166977371|sp|A7FIG1|RF1_YERP3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238687250|sp|A9QZ08|RF1_YERPG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238688460|sp|B1JM85|RF1_YERPY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238691366|sp|B2K2Z0|RF1_YERPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21959139|gb|AAM85849.1|AE013831_12 peptide chain release factor RF-1 [Yersinia pestis KIM 10] gi|45436531|gb|AAS62085.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus str. 91001] gi|108775310|gb|ABG17829.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis Nepal516] gi|108779310|gb|ABG13368.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis Antiqua] gi|115347739|emb|CAL20654.1| peptide chain release factor 1 [Yersinia pestis CO92] gi|145210092|gb|ABP39499.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis Pestoides F] gi|149292464|gb|EDM42538.1| peptide chain release factor 1 [Yersinia pestis CA88-4125] gi|152958846|gb|ABS46307.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP 31758] gi|162354441|gb|ABX88389.1| peptide chain release factor 1 [Yersinia pestis Angola] gi|165913193|gb|EDR31816.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. IP275] gi|165921639|gb|EDR38836.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. F1991016] gi|165991672|gb|EDR43973.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. E1979001] gi|166207620|gb|EDR52100.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962115|gb|EDR58136.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049069|gb|EDR60477.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056264|gb|EDR66033.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750944|gb|ACA68462.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII] gi|186698400|gb|ACC89029.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+] gi|229680836|gb|EEO76931.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516] gi|229689112|gb|EEO81177.1| peptide chain release factor RF-1 [Yersinia pestis biovar Orientalis str. India 195] gi|229693765|gb|EEO83814.1| peptide chain release factor RF-1 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702201|gb|EEO90220.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A] gi|262361967|gb|ACY58688.1| peptide chain release factor 1 [Yersinia pestis D106004] gi|262365894|gb|ACY62451.1| peptide chain release factor 1 [Yersinia pestis D182038] gi|270339381|gb|EFA50158.1| peptide chain release factor 1 [Yersinia pestis KIM D27] gi|294354371|gb|ADE64712.1| peptide chain release factor 1 [Yersinia pestis Z176003] gi|320015305|gb|ADV98876.1| peptide chain release factor RF-1 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 360 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 105/237 (44%), Positives = 148/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K I Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 Q----LAEASERRNLLGTGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|293392123|ref|ZP_06636457.1| peptide chain release factor 1 [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952657|gb|EFE02776.1| peptide chain release factor 1 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 360 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 119/296 (40%), Positives = 178/296 (60%), Gaps = 14/296 (4%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYL 119 ++L NL +L L DD + + ++ K E+E +Q+ +L D ND YL Sbjct: 56 NQLNSNLEEAQLLL--DDPEMKEMAQMEIEESKAELEQVEQYLQILLLPKDPNDEYNCYL 113 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ AG GG E+ +A L RMY+R+AE +++ E L ++ E+ G K L+ G YG Sbjct: 114 EIRAGTGGDEAGIFAGDLFRMYSRYAETKRWHVEVLSENESEQGGFKEIIALVSGDGVYG 173 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDTYRASGAG Sbjct: 174 QLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAG 233 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-I 298 GQH+N TDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L + Q++E++A Sbjct: 234 GQHINKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQ---QEQEKLAQEQ 290 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ + +G G +IR+Y P V D R N+ +V++G +DD ++ + Sbjct: 291 ADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPII 345 >gi|271500557|ref|YP_003333582.1| peptide chain release factor 1 [Dickeya dadantii Ech586] gi|270344112|gb|ACZ76877.1| peptide chain release factor 1 [Dickeya dadantii Ech586] Length = 361 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 104/235 (44%), Positives = 146/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LE+ AG GG E+ +A L RMY+R+AE R++K E + DGE G K + Sbjct: 107 DERGCFLEIRAGTGGDEAALFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P V ++ +I+ SD RIDT Sbjct: 167 VGDGAYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEVPEAELPDINPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMHKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G +IR+Y P V D R N+ + ++G LD Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338 >gi|23502722|ref|NP_698849.1| peptide chain release factor 1 [Brucella suis 1330] gi|161619787|ref|YP_001593674.1| peptide chain release factor 1 [Brucella canis ATCC 23365] gi|254700516|ref|ZP_05162344.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513] gi|254704887|ref|ZP_05166715.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686] gi|254708865|ref|ZP_05170676.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94] gi|254713712|ref|ZP_05175523.1| peptide chain release factor 1 [Brucella ceti M644/93/1] gi|254715938|ref|ZP_05177749.1| peptide chain release factor 1 [Brucella ceti M13/05/1] gi|256030391|ref|ZP_05444005.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1] gi|256370269|ref|YP_003107780.1| peptide chain release factor 1 [Brucella microti CCM 4915] gi|260567639|ref|ZP_05838109.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40] gi|261217701|ref|ZP_05931982.1| peptide chain release factor 1 [Brucella ceti M13/05/1] gi|261316358|ref|ZP_05955555.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94] gi|261321452|ref|ZP_05960649.1| peptide chain release factor 1 [Brucella ceti M644/93/1] gi|261751020|ref|ZP_05994729.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513] gi|261755581|ref|ZP_05999290.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686] gi|32171563|sp|Q8FYK3|RF1_BRUSU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039960|sp|A9M8K5|RF1_BRUC2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|23348737|gb|AAN30764.1| peptide chain release factor 1 [Brucella suis 1330] gi|161336598|gb|ABX62903.1| peptide chain release factor 1 [Brucella canis ATCC 23365] gi|256000432|gb|ACU48831.1| peptide chain release factor 1 [Brucella microti CCM 4915] gi|260157157|gb|EEW92237.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40] gi|260922790|gb|EEX89358.1| peptide chain release factor 1 [Brucella ceti M13/05/1] gi|261294142|gb|EEX97638.1| peptide chain release factor 1 [Brucella ceti M644/93/1] gi|261295581|gb|EEX99077.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94] gi|261740773|gb|EEY28699.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513] gi|261745334|gb|EEY33260.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686] Length = 359 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 35 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 92 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 327 KLDRVMEGDLDELVDALIS 345 >gi|294851112|ref|ZP_06791785.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026] gi|294819701|gb|EFG36700.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026] Length = 377 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 53 LASEYSELQDVVGKIRELSDARMEAS---DLAAMSDDASTDAEMRALAVEELPEVEKRIA 109 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 169 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 344 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 345 KLDRVMEGDLDELVDALIS 363 >gi|237816235|ref|ZP_04595228.1| peptide chain release factor 1 [Brucella abortus str. 2308 A] gi|260758776|ref|ZP_05871124.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292] gi|260884577|ref|ZP_05896191.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68] gi|297247116|ref|ZP_06930834.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196] gi|237788302|gb|EEP62517.1| peptide chain release factor 1 [Brucella abortus str. 2308 A] gi|260669094|gb|EEX56034.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292] gi|260874105|gb|EEX81174.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68] gi|297174285|gb|EFH33632.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196] Length = 377 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 53 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 109 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVS 169 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 344 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 345 KLDRVMEGDLDELVDALIS 363 >gi|123442667|ref|YP_001006644.1| peptide chain release factor 1 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332161451|ref|YP_004298028.1| peptide chain release factor 1 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166223618|sp|A1JRU0|RF1_YERE8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|122089628|emb|CAL12478.1| peptide chain release factor 1 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318605428|emb|CBY26926.1| peptide chain release factor 1 [Yersinia enterocolitica subsp. palearctica Y11] gi|325665681|gb|ADZ42325.1| peptide chain release factor 1 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 360 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K + Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQ----AEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|304317929|ref|YP_003853074.1| peptide chain release factor 1 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779431|gb|ADL69990.1| peptide chain release factor 1 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 353 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 109/243 (44%), Positives = 152/243 (62%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGAGG E+ +A L RMYT +AEK+ +K E + + E G K L I Sbjct: 104 DEKDVIMEIRAGAGGEEAALFAYDLFRMYTMYAEKKHWKYEIMSSNATELGGFKEVILNI 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ RI ++ R HTS +++ V P V+D ++IEI+ +D +ID Sbjct: 164 AGKGAYSRLKFESGVHRVQRIPTTEAGGRIHTSTATVAVLPEVED-VDIEINPNDIKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+ G GGQ VNTTDSAVR+THIPTG+V+ CQ ERSQ +N+ +A +LRAKLYE+ +++ Sbjct: 223 FRSGGHGGQSVNTTDSAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEK 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ I + K ++G G +IR+Y P V D R + VLDGDLD+ + A Sbjct: 283 EK--EISMTRKLQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYKLQMVLDGDLDEIIDA 339 Query: 350 TLA 352 LA Sbjct: 340 LLA 342 >gi|238792551|ref|ZP_04636184.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909] gi|238728186|gb|EEQ19707.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909] Length = 360 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 104/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K + Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 Q----LAEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|323704815|ref|ZP_08116392.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535741|gb|EGB25515.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum LX-11] Length = 353 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 108/243 (44%), Positives = 151/243 (62%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGAGG E+ +A L RMYT +AEK+++K E + + E G K I Sbjct: 104 DEKDVIMEIRAGAGGEEAALFAYDLFRMYTMYAEKKRWKYEIMSSNATELGGFKEVIFSI 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ RI ++ R HTS +++ V P V+D ++IEI+ +D +ID Sbjct: 164 AGKGAYSRLKFESGVHRVQRIPTTEAGGRIHTSTATVAVLPEVED-VDIEINPNDIKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+ G GGQ VNTTDSAVR+THIPTG+V+ CQ ERSQ +N+ +A +LRAKLYE+ +++ Sbjct: 223 FRSGGHGGQSVNTTDSAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEK 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E I + K ++G G +IR+Y P V D R + VLDGDLD+ + A Sbjct: 283 ER--EISMTRKLQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYKLQMVLDGDLDEIIDA 339 Query: 350 TLA 352 LA Sbjct: 340 LLA 342 >gi|254731050|ref|ZP_05189628.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292] Length = 351 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 27 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 83 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 84 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVS 143 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 144 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 203 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 204 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 261 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 262 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 318 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 319 KLDRVMEGDLDELVDALIS 337 >gi|237748574|ref|ZP_04579054.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13] gi|229379936|gb|EEO30027.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13] Length = 360 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 104/243 (42%), Positives = 151/243 (62%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY+R+AEK ++K E + + E G + + + Sbjct: 107 DDKNIFLEIRAGTGGDESALFAADLLRMYSRFAEKNRWKVEIVSASESELGGYREVIVRL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ ++ R HTS ++ V P DD ++ I+ +D RIDT Sbjct: 167 IGNDVYSRLKFESGGHRVQRVPVTETQGRIHTSACTVAVMPEADDVSDVHINPADIRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSA+RITH PTG+VV+CQ +RSQHKNKAQA +L A++ + ++Q Sbjct: 227 FRASGAGGQHINKTDSAIRITHFPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQ-- 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P V D R N+ ++DGD+D+ + A Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLEFIMDGDMDELVNA 343 Query: 350 TLA 352 A Sbjct: 344 LAA 346 >gi|313665080|ref|YP_004046951.1| peptide chain release factor 1 [Mycoplasma leachii PG50] gi|312949513|gb|ADR24109.1| peptide chain release factor 1 [Mycoplasma leachii PG50] Length = 363 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 126/345 (36%), Positives = 192/345 (55%), Gaps = 25/345 (7%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELAL 77 +RL + ED ++ +++ + L +E+ +L+ + F+ K+ D + D +LE Sbjct: 14 KRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAILE--- 70 Query: 78 EEDDCSILQ-------ETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTE 129 E D +++ E +D ++ ++ +E E LL + D + +E+ AGG E Sbjct: 71 NEKDTELIELAKIELDENNDKVEHLQQVIE----EMLLPKDPNDEKNVIVEIRGAAGGDE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY +AE + +K LE GE G +IKG Y LK E G HR Sbjct: 127 ANIFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R TS +++ V P + + +EIEI +D RIDTYRASGAGGQHVNTTDSA Sbjct: 187 VQRVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV Q RSQH NK A MLRAK+YE E++K++ A + K +G G Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQ--AQADATRKNAVGTG 303 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + V++G++D+F+ A + Sbjct: 304 ARSEKIRTYNY-PQNRVTDHRIGLTLNKLDQVMEGNIDEFIIALI 347 >gi|307265645|ref|ZP_07547198.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919289|gb|EFN49510.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1] Length = 246 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 104/236 (44%), Positives = 154/236 (65%), Gaps = 7/236 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AGAGG E+ +A+ L RMY+ +AEK+ +K E + ++ + G K L I G AY Sbjct: 1 MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAY 60 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E GVHR+ R+ ++ R HTS +++ V P V++ +++EI+ SD +ID +R+ G Sbjct: 61 SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEE-VDVEINPSDIKIDVFRSGGH 119 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ+++ I Sbjct: 120 GGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQR--EI 177 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E+ K+++G G +IR+Y P V D R + +VLDGDLD+ + A + Sbjct: 178 AETRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 232 >gi|256821856|ref|YP_003145819.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069] gi|256795395|gb|ACV26051.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069] Length = 364 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 109/259 (42%), Positives = 157/259 (60%), Gaps = 17/259 (6%) Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 LEVE ++ L D + +LE+ AG GG E+ +A L RMY+++AEK++++ E + Sbjct: 95 LEVEMQKL-LLPRDPNDDKNTFLEIRAGTGGDEAAIFAGDLFRMYSKYAEKKRWQVEVIS 153 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 DGE G K + I G + Y LK E G HR+ R+ +S R HTS ++ V P D Sbjct: 154 QSDGEHGGYKEIIVRISGDSVYSHLKFESGAHRVQRVPETESQGRIHTSACTVAVMPEAD 213 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + IEI+ +D +IDT+RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKNKA+A Sbjct: 214 ELDAIEINPADLKIDTFRASGAGGQHVNKTDSAIRITHLPTGVVVECQDERSQHKNKAKA 273 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTE-----IGWG---RQIRSYVLQPYQMVKDLRT 328 ++L+A+L E K +S +TE +G G +IR+Y P + D R Sbjct: 274 MSVLQARLTAAEQAK-------AQSEQTEMRRNLVGTGDRSDRIRTYNF-PQGRMTDHRI 325 Query: 329 NIEKTSPSDVLDGDLDDFM 347 N+ ++++GD+D + Sbjct: 326 NLTLYKLDEIMEGDIDQIV 344 >gi|52425247|ref|YP_088384.1| peptide chain release factor 1 [Mannheimia succiniciproducens MBEL55E] gi|61214602|sp|Q65TB1|RF1_MANSM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52307299|gb|AAU37799.1| PrfA protein [Mannheimia succiniciproducens MBEL55E] Length = 360 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 106/242 (43%), Positives = 151/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +AYLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K L+ Sbjct: 107 DEYNAYLEIRAGTGGDEAGIFAGDLFRMYSRYAEMKRWRVEVLSENESEQGGYKEIIALV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 167 SGDNVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ ERSQHKNKA+A +L ++L + E K Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGMVVECQDERSQHKNKAKALAVLASRLVQAEQDKL 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 A + + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 287 --AAEQATTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|153008371|ref|YP_001369586.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188] gi|166223580|sp|A6WXQ3|RF1_OCHA4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151560259|gb|ABS13757.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188] Length = 357 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 126/348 (36%), Positives = 192/348 (55%), Gaps = 22/348 (6%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + + ++ L E L + I+E+ D + + +L Sbjct: 9 MDQLLKRFSMIESQMANNPDSETYVK---LASEYSELQEVVGKIRELTDSRKEAV---DL 62 Query: 76 ALEEDDCSI--------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 A DD S L+E +RI+ + Q L AD +A LE+ AG GG Sbjct: 63 AAMRDDASTDAEMRALALEELPGVEKRIEGLEQEVQILLLPKDAADEKNAILEIRAGTGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GV Sbjct: 123 LEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P +D I+IEI D RIDT RASGAGGQHVNTTD Sbjct: 183 HRVQRVPETEAGGRIHTSAATVAVLPEAED-IDIEIRNEDIRIDTMRASGAGGQHVNTTD 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ES ++++G Sbjct: 242 SAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAD--TERSESRRSQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R N+ V++GDLD+ + A ++ Sbjct: 299 SGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALIS 345 >gi|332532477|ref|ZP_08408355.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis ANT/505] gi|332038120|gb|EGI74567.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis ANT/505] Length = 361 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 123/336 (36%), Positives = 190/336 (56%), Gaps = 21/336 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELA 76 V+R + DP + + + L +E L+ + +F+ KE QD L E Sbjct: 13 VERYEEVQALLSDPSVISDQNRFRALSKEYSELEEIVKTFLNYKETQDDLAS----AEEM 68 Query: 77 LEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L++ D + + + + K ++ + Q L D+N+ ++EV AG GG E+ Sbjct: 69 LKDSDPEMREMAQEEYKEAKAQILVIEDQIQVLMLPKDPRDNNNVFVEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +K+K E + ++GE G K I G YG LK E GVHR+ R Sbjct: 129 FAGDLFRMYSRYAENKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I+I+ +D ++DT+RASGAGGQHVN TDSA+R+ Sbjct: 189 VPETESQGRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE--IGWG- 309 THIPTGVVV+CQ +RSQHKN+A+A ++L A+L + E +KR + E+S+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKR----HAAEASERRDLVGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +IR+Y P + D R N+ ++V+ GDL Sbjct: 305 RSERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDL 339 >gi|169824785|ref|YP_001692396.1| peptide chain release factor 1 [Finegoldia magna ATCC 29328] gi|303235021|ref|ZP_07321645.1| peptide chain release factor 1 [Finegoldia magna BVS033A4] gi|238687758|sp|B0S2B6|RF1_FINM2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167831590|dbj|BAG08506.1| bacterial peptide chain release factor 1 [Finegoldia magna ATCC 29328] gi|302493876|gb|EFL53658.1| peptide chain release factor 1 [Finegoldia magna BVS033A4] Length = 355 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 121/340 (35%), Positives = 194/340 (57%), Gaps = 11/340 (3%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + D+ V + L K DP + ++ LM+E L+ ++ +D L + E Sbjct: 4 NLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEEDKE 63 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTES 130 L D + + D + ++ ++E Q E +L D ND ++E+ AGAGG E+ Sbjct: 64 LLGTTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LLRMY +++K+ + TE ++I GIK +++KG AY LK E GVHR+ Sbjct: 124 GLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S+ R HTS +++ V P +D ++++I + D RID +RASG GGQ VNTTDSAV Sbjct: 184 QRVPQTESSGRIHTSTATVAVLPEAED-VDVKIEQKDLRIDVFRASGNGGQCVNTTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV CQ E+SQ KNK +A +L+++LY +L + E+ + ++ K+++G G Sbjct: 243 RITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLY--DLMEEEKNKDRADARKSQVGTGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P + D R N + LDGD+++ + Sbjct: 301 RSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMI 339 >gi|289423330|ref|ZP_06425138.1| peptide chain release factor 1 [Peptostreptococcus anaerobius 653-L] gi|289156261|gb|EFD04918.1| peptide chain release factor 1 [Peptostreptococcus anaerobius 653-L] Length = 354 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 124/339 (36%), Positives = 191/339 (56%), Gaps = 19/339 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEED-- 80 L+ K DP + + + LM+E L+ + +E + + + ++ +LE +ED Sbjct: 15 LSEKVADPEIISDQPTWQKLMKENSELEPIVMKYREYRKVNETIAESKQILEEESDEDLR 74 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANML 137 + + ++ + Q + +E E K LL D ND +E+ GAGG E+ +A L Sbjct: 75 ELAKMELSEAESQIVDIEDELK----LLLVPKDPNDEKNVIVEIRGGAGGDEAALFAGDL 130 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+R+AE++ +KT + ++ G K + LIKG AY LK E GVHR+ RI + Sbjct: 131 FRMYSRYAERKGWKTSLMSSNETGVGGYKEVSFLIKGKGAYSRLKYESGVHRVQRIPTTE 190 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS +++ V P VDD +E++I+ D R D +RASG GGQ VNTTDSAVR+THIPT Sbjct: 191 SGGRIHTSTATVAVLPEVDD-VEVQINPEDLRFDVFRASGNGGQCVNTTDSAVRLTHIPT 249 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G VV CQ E+SQ KNK +A +L+A+LY+ L +++ I K+++G G +IR+ Sbjct: 250 GEVVSCQDEKSQLKNKEKALKVLKARLYDRALADQQK--EISAERKSQVGTGDRSERIRT 307 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 Y P V D R N+ +DGD+D+ + + + Sbjct: 308 YNF-PQGRVSDHRINLTLYKLDSFIDGDIDEMIDGLITV 345 >gi|212213424|ref|YP_002304360.1| peptide chain release factor 1 [Coxiella burnetii CbuG_Q212] gi|238058711|sp|B6J390|RF1_COXB2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|212011834|gb|ACJ19215.1| bacterial peptide chain release factor 1 [Coxiella burnetii CbuG_Q212] Length = 361 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 106/247 (42%), Positives = 150/247 (60%), Gaps = 9/247 (3%) Query: 107 LLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LL D ND +LE+ AG GG E+ +A L RMY R+AE + ++ + H+GE Sbjct: 100 LLLVPKDPNDELNVFLEIRAGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHG 159 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G K + G Y LK E G HR+ R+ +S R HTS ++ + P VD+ +I+I Sbjct: 160 GFKEVIARVIGEGVYSQLKFESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKI 219 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 + ++ RIDT+RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ERSQHKNKA+A ++L++K Sbjct: 220 NPAELRIDTFRASGAGGQHVNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSK 279 Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 L E K+++ K+ +G G +IR+Y P V D R N+ +V++ Sbjct: 280 LLAAERAKQDQ--EQAAKRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYQLDEVIE 336 Query: 341 GDLDDFM 347 GDLD + Sbjct: 337 GDLDPVI 343 >gi|332285704|ref|YP_004417615.1| peptide chain release factor 1 [Pusillimonas sp. T7-7] gi|330429657|gb|AEC20991.1| peptide chain release factor 1 [Pusillimonas sp. T7-7] Length = 355 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 123/338 (36%), Positives = 180/338 (53%), Gaps = 9/338 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 RL ++ +P + ++ + + RER LD ++ D E+ + + Sbjct: 9 AHRLIEVDALLAEPEIAGDMDRYRKISRERAELDPVVAVFNSFLATEGDIKTAQEM-MAD 67 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANML 137 D + E L + KLE + LL DS YLE+ AG GG ES +A L Sbjct: 68 PDMRGMAEEELMLGKEKLEQLEADLQVLLLPRDPDDSRSVYLEIRAGTGGDESALFAGDL 127 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 LRMYTR+AE ++ E + D E G K + G YG LK E G HR+ R+ + Sbjct: 128 LRMYTRYAENNSWRVELVSASDSEIGGYKEVIARVDGDGVYGRLKFESGAHRVQRVPATE 187 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + R HTS ++ V P D+ +I I+ +D RIDT+RASGAGGQH+N TDSAVR+TH+PT Sbjct: 188 TQGRIHTSACTVAVLPEADEQSDIVINPADLRIDTFRASGAGGQHINKTDSAVRVTHLPT 247 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+VV+CQ +RSQH+NK +A +L A+L + Q++E+ K+ +G G +IR+ Sbjct: 248 GLVVECQDDRSQHRNKDKALQVLAARLK--DKQQQEQHDKEAAQRKSLVGTGDRSERIRT 305 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 Y P V D R N+ ++DGDL++ A LA Sbjct: 306 YNY-PQGRVTDHRINLTLYKLGHIMDGDLNELTNALLA 342 >gi|255065586|ref|ZP_05317441.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256] gi|255050411|gb|EET45875.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256] Length = 358 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|56476056|ref|YP_157645.1| peptide chain release factor 1 [Aromatoleum aromaticum EbN1] gi|81598974|sp|Q5P7G7|RF1_AZOSE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56312099|emb|CAI06744.1| peptide chain release factor 1 (RF-1) [Aromatoleum aromaticum EbN1] Length = 359 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 106/241 (43%), Positives = 151/241 (62%), Gaps = 6/241 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D + +LEV AG GG E+ +A LLRMYTR+AE++++K E + + G K L Sbjct: 106 SDERNLFLEVRAGTGGDEASLFAGDLLRMYTRYAERQRWKVEIVSSSPSDLGGYKEVILR 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G AY LK E G HR+ RI ++ R HTS ++ V P D+ + I+ +D RID Sbjct: 166 IAGAGAYSKLKFESGGHRVQRIPVTETQGRIHTSACTVAVMPEADEVEAVNINPADLRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+N+AQA ++L A++ + +L Sbjct: 226 TFRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHRNRAQAMSVLAARIQDRQL-- 283 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 RE+ A + K+ +G G +IR+Y P V D R N+ V+ GDLD+ + Sbjct: 284 REQQAREAATRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLDAVMQGDLDELVD 342 Query: 349 A 349 A Sbjct: 343 A 343 >gi|121602027|ref|YP_988678.1| peptide chain release factor 1 [Bartonella bacilliformis KC583] gi|166223530|sp|A1URS5|RF1_BARBK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120614204|gb|ABM44805.1| peptide chain release factor 1 [Bartonella bacilliformis KC583] Length = 359 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A +E+ AG GG+E+ +A L RMY R+A K+K E + + D E G K Sbjct: 107 ADEKSAIIEIRAGTGGSEAALFAGDLFRMYERYANAHKWKVEVVSLSDSEVGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ +++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ISGKGVFSKLKFESGVHRVQRVPETETSGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LR++L+++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRSRLFDIERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E + S KT++G G +IR+Y P V D R N+ +++GDLD+ + Sbjct: 285 AE--SERSASRKTQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLDELIN 341 Query: 349 ATLA 352 ++ Sbjct: 342 PLIS 345 >gi|70732476|ref|YP_262238.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5] gi|119361580|sp|Q4K695|RF1_PSEF5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|68346775|gb|AAY94381.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5] Length = 360 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 107/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE G K + Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + YG LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ +D RIDT Sbjct: 169 EGESVYGKLKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVN TDSA+RITHIP+G+VV+CQ+ERSQHKN+A+A + L AKL + Q+ Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQT 285 Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 AN I K +G G +IR+Y P V D R N+ S ++L G ++ ++ Sbjct: 286 SAAANAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLDEILAGGVEAVIE 344 Query: 349 ATLA 352 LA Sbjct: 345 PLLA 348 >gi|319404588|emb|CBI78194.1| peptide chain release factor 1 [Bartonella rochalimae ATCC BAA-1498] Length = 359 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD +E+ AG GG+E+ +A L RMY R+A +K E + + DGE G K Sbjct: 107 ADEKSVIIEIRAGTGGSEAALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ RI ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ISGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E + S KT++G G +IR+Y P V D R N+ +++GDL++ + Sbjct: 285 AE--SERSASRKTQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELIN 341 Query: 349 ATLA 352 A ++ Sbjct: 342 ALIS 345 >gi|262369773|ref|ZP_06063101.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046] gi|262315841|gb|EEY96880.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046] Length = 362 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 104/238 (43%), Positives = 146/238 (61%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N AYLE+ AG GG E+ ++ L RMYT++AE + ++ E L ++GE G K L+ Sbjct: 107 DANSAYLEIRAGTGGDEAAIFSGDLYRMYTKYAESQGWRIEVLSENEGEHGGYKEIICLV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P +D +EI+ SD RIDT Sbjct: 167 NGEGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTTVEINASDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLASRLESAKRAAA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ V++GDL + + Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAVMEGDLTELL 341 >gi|265982882|ref|ZP_06095617.1| peptide chain release factor 1 [Brucella sp. 83/13] gi|306838261|ref|ZP_07471111.1| peptide chain release factor 1 [Brucella sp. NF 2653] gi|264661474|gb|EEZ31735.1| peptide chain release factor 1 [Brucella sp. 83/13] gi|306406664|gb|EFM62893.1| peptide chain release factor 1 [Brucella sp. NF 2653] Length = 359 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 35 LASEYSELQDVVGKIRELSDARKEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 92 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 327 KLDRVMEGDLDELVNALIS 345 >gi|297588765|ref|ZP_06947408.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516] gi|297574138|gb|EFH92859.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516] Length = 355 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 122/348 (35%), Positives = 197/348 (56%), Gaps = 27/348 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + D+ V + L K DP + ++ LM+E L+ ++ +D L + Sbjct: 4 NLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKN------ 57 Query: 75 LALEED--------DCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVH 122 LEED D + + D + ++ ++E Q + +L D ND ++E+ Sbjct: 58 --LEEDKEMLGTTGDSEMEELLKDEISTLEEQIEKDQEDLKILLLPKDPNDEKNVFIEIR 115 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG E+ +A LLRMY +++K+++ TE ++I GIK +++KG AY LK Sbjct: 116 AGAGGDEAGLFAGELLRMYQMYSDKKRWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLK 175 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S+ R HTS +++ V P +D ++++I + D RID +RASG GGQ Sbjct: 176 YESGVHRVQRVPQTESSGRIHTSTATVAVLPEAED-VDVKIEQKDLRIDVFRASGNGGQC 234 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ KNK +A +L+++LY +L + E+ + ++ Sbjct: 235 VNTTDSAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLY--DLMEEEKNKDRADAR 292 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K+++G G +IR+Y P + D R N + LDGD+++ + Sbjct: 293 KSQVGTGDRSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMI 339 >gi|261363763|ref|ZP_05976646.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996] gi|288568341|gb|EFC89901.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996] Length = 358 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|146329088|ref|YP_001209002.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A] gi|146232558|gb|ABQ13536.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A] Length = 365 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 126/332 (37%), Positives = 186/332 (56%), Gaps = 15/332 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R LN DP + + + +E L + +EI+ + L EL ED Sbjct: 17 ERYEELNALLADPSVAADPDLLRRYGQEHAQLAPIVEIFQEIEHLQQEANDLKEL---ED 73 Query: 81 DCSILQ----ETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135 D + + E S+NL++ + E E K ++ + D + +LE+ AG GG E+ +A Sbjct: 74 DAEMAEYVAAEQSENLKKTE-ECEQKLARLMIPQDPLDEANIFLEIRAGTGGDEAAIFAG 132 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L+RMY R+AE R ++ L + GE G + + G Y LK E G HR+ R+ Sbjct: 133 DLMRMYARFAENRGWQISVLSENAGEFGGYREIICRVSGQRVYSTLKFESGAHRVQRVPE 192 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +++ R HTS +++ V P D+ +IEI+ +D R+DT+RASGAGGQHVN TDSA+RITH+ Sbjct: 193 TEASGRIHTSAATVAVLPESDEIEDIEINPADLRVDTFRASGAGGQHVNKTDSAIRITHL 252 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ+ERSQHKN+A+A L AKL + E Q E+ I K+ +G G +I Sbjct: 253 PTGIVVECQEERSQHKNRAKAMRWLYAKLMDRERQAAEK--EIAAERKSLVGTGDRSERI 310 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 R+Y P V D R N+ + DVL+G LD Sbjct: 311 RTYNY-PQGRVTDHRINLTLYALDDVLNGQLD 341 >gi|253688500|ref|YP_003017690.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259585241|sp|C6DHY1|RF1_PECCP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|251755078|gb|ACT13154.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 360 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 149/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LEV AG GG E+ +A L RMY+R+AE R+++ E + DGE G K I Sbjct: 107 DERGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V V ++ +I+ +D RIDT Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + +G G +IR+Y P V D R N+ +V++G LD ++ Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQP 343 Query: 350 TL 351 + Sbjct: 344 VV 345 >gi|83644569|ref|YP_433004.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396] gi|119361548|sp|Q2SL95|RF1_HAHCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83632612|gb|ABC28579.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396] Length = 360 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 152/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D ++ +LE+ AG GG E+ +A L RMY+R+AE +K+K E + GE G K + Sbjct: 109 DGSNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAELKKWKVEIVSESPGEHGGYKEVISRV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N + LK E G HR+ R+ +S R HTS ++ + P V++ +++I+ +D R+DT Sbjct: 169 AGDNVFNLLKFESGAHRVQRVPETESQGRIHTSACTVAILPEVEEVGDVDINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSA+RITH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL L + Sbjct: 229 YRASGAGGQHVNKTDSAIRITHLPSGIVVECQDERSQHKNRAKAMSLLKAKL--LSSAQE 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ ++ K+ +G G +IR+Y P + D R N+ +V+ GDLD ++ Sbjct: 287 KQAKEQAQTRKSLVGSGDRSERIRTYNY-PQGRITDHRINLTLYKLEEVVQGDLDPVIQP 345 Query: 350 TL 351 L Sbjct: 346 LL 347 >gi|254230550|ref|ZP_04923918.1| peptide chain release factor 1 [Vibrio sp. Ex25] gi|262394972|ref|YP_003286826.1| peptide chain release factor 1 [Vibrio sp. Ex25] gi|151936922|gb|EDN55812.1| peptide chain release factor 1 [Vibrio sp. Ex25] gi|262338566|gb|ACY52361.1| peptide chain release factor 1 [Vibrio sp. Ex25] Length = 362 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 119/327 (36%), Positives = 184/327 (56%), Gaps = 11/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L RE L+ + Q + ++L+ E EDD + + + Sbjct: 25 DPDVIGDQDKFRALSREYSQLEEVTKCFQAYQ-QAQEDLVAAEEMANEDDEEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+++AEK Sbjct: 84 IKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A +L A++ + E ++R A + ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ ++V++GDL + + Sbjct: 321 DHRINLTIYRLNEVMEGDLQSLIDPVI 347 >gi|298369801|ref|ZP_06981117.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str. F0314] gi|298281261|gb|EFI22750.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str. F0314] Length = 358 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|254717939|ref|ZP_05179750.1| peptide chain release factor 1 [Brucella sp. 83/13] Length = 351 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 27 LASEYSELQDVVGKIRELSDARKE---ASDLAAMRDDASTDAEMRALAVEELPEVEKRIA 83 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 84 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 143 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 144 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 203 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 204 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 261 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 262 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 318 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 319 KLDRVMEGDLDELVNALIS 337 >gi|50121117|ref|YP_050284.1| peptide chain release factor 1 [Pectobacterium atrosepticum SCRI1043] gi|61214611|sp|Q6D551|RF1_ERWCT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|49611643|emb|CAG75092.1| peptide chain release factor 1 [Pectobacterium atrosepticum SCRI1043] Length = 360 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 148/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LEV AG GG E+ +A L RMY+R+AE R+++ E + DGE G K I Sbjct: 107 DERGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V V ++ +I+ SD RIDT Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMAAVPEAELPDINPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + +G G +IR+Y P V D R N+ +V++G LD ++ Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQP 343 Query: 350 TL 351 + Sbjct: 344 VV 345 >gi|261378877|ref|ZP_05983450.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685] gi|269144693|gb|EEZ71111.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685] Length = 358 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|227111330|ref|ZP_03824986.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 360 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 149/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LEV AG GG E+ +A L RMY+R+AE R+++ E + DGE G K I Sbjct: 107 DERGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEVVSASDGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V V ++ +I+ +D RIDT Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + +G G +IR+Y P V D R N+ +V++G LD ++ Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQP 343 Query: 350 TL 351 + Sbjct: 344 VV 345 >gi|212711979|ref|ZP_03320107.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM 30120] gi|212685501|gb|EEB45029.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM 30120] Length = 360 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AGAGG E+ +A L RMY+R+AE +++ E + DGE G K I Sbjct: 107 DEYNCFVEIRAGAGGDEAAIFAGDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E G HR+ R+ +S R HTS +I + P + ++ EIS +D RIDT Sbjct: 167 SGDSVYGRLKFESGGHRVQRVPETESQGRIHTSACTIAILPELPEAELPEISPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 A + +G G +IR+Y P V D R N+ +V++G LD ++ Sbjct: 287 H--AAEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|156973549|ref|YP_001444456.1| peptide chain release factor 1 [Vibrio harveyi ATCC BAA-1116] gi|166223617|sp|A7MY68|RF1_VIBHB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|156525143|gb|ABU70229.1| hypothetical protein VIBHAR_01250 [Vibrio harveyi ATCC BAA-1116] Length = 362 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 120/323 (37%), Positives = 182/323 (56%), Gaps = 11/323 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + N + + L +E L+ + Q + D+L E EDD + + + Sbjct: 25 DPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQ-QAQDDLAAAEDMANEDDEEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+++AEK Sbjct: 84 IKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A +L A++ + E ++R A + ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFM 347 D R N+ ++V++GDL + Sbjct: 321 DHRINLTIYRLNEVMEGDLQSLI 343 >gi|212697120|ref|ZP_03305248.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM 7454] gi|212675895|gb|EEB35502.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM 7454] Length = 263 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 104/243 (42%), Positives = 156/243 (64%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGAGG E+ +A L RMY +A+K+ +KTE +++ G+K AT ++ Sbjct: 12 DHKDVIVEIRAGAGGEEAGLFAGNLYRMYHMYADKQNYKTEDIDVSSQGIGGMKEATFIV 71 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS +++ V P D+ ++I+I +D R D Sbjct: 72 RGEGAYSKLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEADE-VDIKIDPNDIRTDV 130 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ KNK +A +LRA+LYE+E +KR Sbjct: 131 YRSSGNGGQSVNTTDSAVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEMEEEKR 190 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ I ++ K+++G G +IR+Y P + D R N D LDG++++ + + Sbjct: 191 QK--EISDNRKSQVGTGDRSERIRTYNY-PQGRITDHRINKTIYQLDDFLDGNIEEMIDS 247 Query: 350 TLA 352 + Sbjct: 248 LIT 250 >gi|319408172|emb|CBI81825.1| peptide chain release factor 1 [Bartonella schoenbuchensis R1] Length = 359 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 108/244 (44%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A +E+ AG GG+E+ +A L RMY R+A +K E + + DG+ G K Sbjct: 107 ADEKSAIIEIRAGTGGSEAALFAGDLFRMYERYANTHNWKVEIISLSDGDVGGYKEIVAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ RI ++ R HTS +++ V P ++ I+I I D RID Sbjct: 167 VSGKGVFSKLKFESGVHRVQRIPETEAGGRIHTSAATVAVLPEAEE-IDIAIHPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+ +A +LRA+L+++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRTRALQILRARLFDIERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E ES KT+IG G +IR+Y P V D R N+ V++GDLD+ + Sbjct: 285 AEN--ERSESRKTQIGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELIH 341 Query: 349 ATLA 352 A ++ Sbjct: 342 ALIS 345 >gi|83310717|ref|YP_420981.1| protein chain release factor A [Magnetospirillum magneticum AMB-1] gi|119361556|sp|Q2W6V3|RF1_MAGMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|82945558|dbj|BAE50422.1| Protein chain release factor A [Magnetospirillum magneticum AMB-1] Length = 354 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 115/280 (41%), Positives = 169/280 (60%), Gaps = 14/280 (5%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 L E++ L+E L+R EV Q L EAD +A +EV AG GG E+ +A Sbjct: 74 LAEEEFYALKERLPALER---EV---QIMLLPKDEADEKNAIIEVRAGTGGEEAALFAAE 127 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY R+A ++ E ++++D G+K A+ I G N + LK E GVHR+ R+ Sbjct: 128 LFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVPAT 187 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ + P ++ ++I++++SD R D YR+ G+GGQ VNTTDSAVR+THIP Sbjct: 188 ESQGRIHTSAATVAIMPEAEE-VDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTHIP 246 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+ V CQQE+SQHKNKA A +LRA+LYE E ++ A + K+++G G +IR Sbjct: 247 TGLAVACQQEKSQHKNKATALKLLRARLYERERSAKD--AERAAARKSQVGSGDRSERIR 304 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 +Y P V D R N+ V+ GD LD+ ++A +A Sbjct: 305 TYNF-PQGRVTDHRINMTLYKIDAVMSGDALDELVEALVA 343 >gi|103488191|ref|YP_617752.1| peptide chain release factor 1 [Sphingopyxis alaskensis RB2256] gi|119361612|sp|Q1GPK3|RF1_SPHAL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|98978268|gb|ABF54419.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingopyxis alaskensis RB2256] Length = 355 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 107/245 (43%), Positives = 158/245 (64%), Gaps = 9/245 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 ADS A LE+ AG GG E+ +A LLRMY+R+A+ + +K E + ++ E G K Sbjct: 104 ADSRAAMLEIRAGTGGDEAALFAGDLLRMYSRYADTQGWKVEIISANEAEVGGYKEVVAS 163 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +S R HTS +++ V P ++ +++ I++SD +ID Sbjct: 164 VSGQGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEE-VDVAINDSDLKID 222 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YRASGAGGQHVNTTDSA+RITHIPTG+VV Q +RSQHKN+A+A +LRA+LY+LE Sbjct: 223 IYRASGAGGQHVNTTDSAIRITHIPTGLVVIQQDQRSQHKNRAKAMQVLRARLYDLE--- 279 Query: 292 REEIANIGESS-KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 RE++ + S+ K+ +G G +IR+Y P V D R N+ ++L+G +D+ + Sbjct: 280 REKLHSAEASARKSMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGAMDELI 338 Query: 348 KATLA 352 A +A Sbjct: 339 DALIA 343 >gi|210623300|ref|ZP_03293717.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275] gi|210153701|gb|EEA84707.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275] Length = 355 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 117/286 (40%), Positives = 167/286 (58%), Gaps = 20/286 (6%) Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEA----------DSND---AYLEVHAGAGGTES 130 ILQE SD R ++E ES + D ND +E+ GAGG E+ Sbjct: 64 ILQEESDEELRELAKMELSDMESQVEPLEEELKLLLVPKDPNDEKNVIVEIRGGAGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LLRMY+R+AE++ +K L ++ G K + +IKG AY LK E GVHR+ Sbjct: 124 ALFAGDLLRMYSRYAERKGWKVSMLSSNETGVGGYKEVSFMIKGKGAYSRLKYESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +S R HTS +++ V P V+D +E+EI+++D RID +RASG GGQ VNTTDSAV Sbjct: 184 QRIPSTESGGRIHTSTATVAVLPEVED-VEVEINDNDIRIDVFRASGNGGQCVNTTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG VV CQ E+SQ KNK +A +L+A+LY+ L +++ I K+++G G Sbjct: 243 RITHLPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDRALADQQK--EISAERKSQVGTGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IR+Y P + D R N+ LDGD+D+ + A + + Sbjct: 301 RSERIRTYNF-PQGRISDHRINLTLYKLDSFLDGDIDEMIDALITV 345 >gi|310779238|ref|YP_003967571.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter polytropus DSM 2926] gi|309748561|gb|ADO83223.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter polytropus DSM 2926] Length = 357 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 102/244 (41%), Positives = 151/244 (61%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG E+ +A L RMY R+AE+ K+KTE + + G+K I Sbjct: 106 DDKNVIIEIRGGTGGDEAALFAANLYRMYCRYAERNKWKTEVMSKSEVGVGGLKEIVFSI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S+ R HTS +++ V P VDD ++EI S+ +IDT Sbjct: 166 QGQGAYSKLKFESGVHRVQRVPETESSGRIHTSTATVAVLPEVDDVEQVEIKPSELKIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSAVRITH+P+GV+V+CQ ERSQ KN+ +A +L KL+E+E++K+ Sbjct: 226 FRSSGAGGQHVNTTDSAVRITHLPSGVIVECQDERSQLKNREKAMKVLATKLFEMEIEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + K ++G G +IR+Y P + D R + LDGDL + + A Sbjct: 286 R--SEVESTRKLQVGTGSRSEKIRTYNY-PQGRITDHRIKLTLHKLDAFLDGDLTEMIDA 342 Query: 350 TLAI 353 + Sbjct: 343 LITF 346 >gi|255525833|ref|ZP_05392762.1| peptide chain release factor 1 [Clostridium carboxidivorans P7] gi|255510476|gb|EET86787.1| peptide chain release factor 1 [Clostridium carboxidivorans P7] Length = 358 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 128/355 (36%), Positives = 197/355 (55%), Gaps = 36/355 (10%) Query: 20 VQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 ++RL F+ K E DP + + E + L +E L+ + IK Q R + + Sbjct: 2 LERLEFIENKYEELSAKISDPSIMADQKEWQKLCKEHAELETLV--IKYRQYRKAEEEL- 58 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFES----------LLSGEADSND---AYL 119 E + +L++ +D R ++ + K+ E+ +L D ND ++ Sbjct: 59 ------ESNKEMLKDETDKDMRDMIQEDIKELEASMDEARQELRILLLPKDPNDDKNVFV 112 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ GAGG E+ +A L RMYTR+AE++ +K E + ++ + G K +IKG AY Sbjct: 113 EIRGGAGGEEAALFAANLTRMYTRYAERKGWKVETISLNATDIGGFKEIVFMIKGAGAYS 172 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E GVHR+ R+ +S+ R HTS +++ V P VDD +++ I+ +D RID +RASG G Sbjct: 173 RLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDD-VDLVINANDIRIDVFRASGHG 231 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNK +A +L+++L+E +R A I Sbjct: 232 GQCVNTTDSAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLFERAEAERS--AGIA 289 Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E K+++G G +IR+Y P V D R + LDGD+D+ + A + Sbjct: 290 EDRKSQVGTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSYLDGDIDEVIDALI 343 >gi|329904245|ref|ZP_08273720.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium IMCC9480] gi|327548069|gb|EGF32798.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium IMCC9480] Length = 360 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMYTR+AE+ +++ E + + G K + + Sbjct: 107 DERNLFLEIRAGTGGDESALFAGDLLRMYTRYAERNRWQVEMVSESSSDVGGYKEVIVRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P VD+ +++I+ SD RIDT Sbjct: 167 IGNGAYSRLKFESGGHRVQRVPTTETQGRIHTSACTVAVMPEVDEISDVDINPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQHKNKA A +L A++ + Q R Sbjct: 227 YRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKASALKVLAARIK--DAQVR 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + + K+ IG G +IR+Y P + D R N+ ++DGDL+D A Sbjct: 285 EQQSKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLNDLTGA 343 Query: 350 TLA 352 A Sbjct: 344 LAA 346 >gi|260655567|ref|ZP_05861055.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1] gi|260630015|gb|EEX48209.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1] Length = 361 Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 125/333 (37%), Positives = 191/333 (57%), Gaps = 16/333 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K DP + NV E +L ++ L + +E R + + +LE+ + + + Sbjct: 20 IEAKMGDPAVASNVKEMGVLGKKHADLQPVVELWQEY--RQVEAGLAEAKSLEDSEDAEM 77 Query: 86 -----QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139 +E + ++R++ E+E + LL + D D +E+ AG GG E+ +A L R Sbjct: 78 AELAKEEAASAVKRLE-EIEAELHRQLLPKDPNDEKDVIVEIRAGTGGDEASLFAADLYR 136 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+R+ E+ +++E +E ++ E G K +KG AY LK E GVHR+ R+ +++ Sbjct: 137 MYSRFVEREGWRSEIVEENETEVGGYKEIVFQVKGAGAYSKLKFESGVHRVQRVPATEAS 196 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ V P +D +EIEI D IDTYR+SGAGGQHVN TDSAVRITH PTG+ Sbjct: 197 GRIHTSAATVAVMPQAED-VEIEIRPEDLDIDTYRSSGAGGQHVNMTDSAVRITHKPTGL 255 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VV CQ ERSQ KN+A+A +LRA+LY+LELQK++ + + + IG G +IR+Y Sbjct: 256 VVTCQDERSQIKNRAKAMMVLRARLYDLELQKKQ--SEEASTRRGMIGSGDRSERIRTYN 313 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R + +LDGD+ + + A Sbjct: 314 F-PQNRVTDHRIGLTLYKLDYMLDGDIYEMIDA 345 >gi|262274708|ref|ZP_06052519.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886] gi|262221271|gb|EEY72585.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886] Length = 362 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 120/327 (36%), Positives = 182/327 (55%), Gaps = 11/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + L +E L+ I + D E+A EDD + + + Sbjct: 25 DPSVISDQDRFRSLSKEYSQLEEVIKCFSAYKQAESDLEAAQEMA-NEDDPEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K ++E E +L D ND +LE+ AGAGG E+ +A L RMY+R+AE Sbjct: 84 VKAAKEDIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAAIFAGDLFRMYSRFAES 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + + GE G K + G AYG +K E G HR+ R+ +S R HTS Sbjct: 144 KGWRVEVINANHGEHGGYKEMIAKVNGDGAYGVMKFESGGHRVQRVPATESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ + P + ++ EI+ +D +IDT+R+SGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TVAILPEIPEAEIPEINPADLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A +L A+L + E +KR A + + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMAVLAARLIKAEEEKR--AAEQASTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ +V++GDLD ++ + Sbjct: 321 DHRINLTVYRLDEVMEGDLDSLIQPII 347 >gi|325479514|gb|EGC82610.1| peptide chain release factor 1 [Anaerococcus prevotii ACS-065-V-Col13] Length = 358 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 123/335 (36%), Positives = 189/335 (56%), Gaps = 15/335 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLILLELALEEDDC 82 L K DP + ++ + + RE L + IKE +D + +N L+ A ++D Sbjct: 15 LEKKMIDPEVLSDIAKLTKITREYNSLKPIVEKYDQIKEAEDTIEENKELINEADDQDMV 74 Query: 83 SILQETSDNLQRIKLEVEYKQFESLL---SGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 +L+E + KL EY + +L DS D +E+ GAGG E+ +A L R Sbjct: 75 EMLKEEIKENE--KLLDEYNEEMKILLIPKDPNDSRDVIIEIRPGAGGDEAGLFAGDLYR 132 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY +A+K +KTE +E+ GIK AT +I+G AY K E GVHR+ R+ +S Sbjct: 133 MYHMYADKEGYKTEDVEVSSQGVGGIKDATFMIRGEGAYSRFKYESGVHRVQRVPETESG 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ V P VD+ +++ + +D R D +R+SG GGQ VNTTDSAVR+THIPTG+ Sbjct: 193 GRIHTSTATVAVLPEVDE-LDVHVDPNDIRTDVFRSSGNGGQSVNTTDSAVRLTHIPTGI 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VV Q E+SQ KNK +A +L A++YELE +KR + I ++ K+++G G +IR+Y Sbjct: 252 VVSMQDEKSQIKNKEKAMRILLARIYELEEEKRNK--EIADNRKSQVGTGDRSERIRTYN 309 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P + D R N D L+G++ + + + + Sbjct: 310 F-PQGRITDHRINKTIYQLDDFLNGNIGEMIDSLI 343 >gi|159462370|ref|XP_001689415.1| peptide chain release factor [Chlamydomonas reinhardtii] gi|158283403|gb|EDP09153.1| peptide chain release factor [Chlamydomonas reinhardtii] Length = 263 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 104/253 (41%), Positives = 150/253 (59%), Gaps = 11/253 (4%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + LL G D A L + AGAGG ++ DWA ML RMY RWAE ++ L+ G+E Sbjct: 2 ELRRLLCGPYDDRGARLTISAGAGGVDAMDWAEMLERMYMRWAEAGGYQVAVLDRAAGDE 61 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--DDSIE 220 AGI G +AYG+L+ E+G HRLVR SP+++ R TSF+ + V PV+ DD E Sbjct: 62 AGITG------GRHAYGYLRCEKGTHRLVRNSPFNAKGLRQTSFAGVDVMPVLGPDDLPE 115 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++++E D I T R+ G GGQ+VN ++ VRI H+PTG+ V+C QERSQ +NKA A ++L Sbjct: 116 LDLNEKDLEITTMRSGGKGGQNVNKVETGVRILHVPTGLAVKCTQERSQAQNKAIALDLL 175 Query: 281 RAKLY--ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +A+L E E + +G + +++ + PY++VKD RT E + V Sbjct: 176 KARLLANSREPPMEEAGSRMGAVADCNT-HAHRVQGCLFHPYKLVKDTRTGTETSDVQAV 234 Query: 339 LDGDLDDFMKATL 351 +DG+L FM A L Sbjct: 235 MDGELGGFMAAVL 247 >gi|319637760|ref|ZP_07992526.1| peptide chain release factor 1 [Neisseria mucosa C102] gi|317400915|gb|EFV81570.1| peptide chain release factor 1 [Neisseria mucosa C102] Length = 358 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|312958850|ref|ZP_07773369.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6] gi|311286620|gb|EFQ65182.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6] Length = 360 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 118/286 (41%), Positives = 173/286 (60%), Gaps = 18/286 (6%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 + E+A+EE ++E D L I LE + ++ LL + D + +LE+ AG GG E+ Sbjct: 76 MREMAVEE-----VREAKDKL--IALEGDLQRM--LLPKDPNDGRNVFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AE+R ++ E L ++GE G K ++G N YG LK E G HR+ Sbjct: 127 AIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+ Sbjct: 187 QRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG 309 RITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q+ AN I K +G G Sbjct: 247 RITHLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSG 303 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y + V D R N+ S ++L G +D ++ LA Sbjct: 304 DRSERIRTYNFAQGR-VTDHRVNLTLYSLDEILAGGVDAVIEPLLA 348 >gi|319406093|emb|CBI79723.1| peptide chain release factor 1 [Bartonella sp. AR 15-3] Length = 359 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD +E+ AG GG+E+ +A L RMY R+A +K E + + DGE G K Sbjct: 107 ADEKSVIIEIRAGTGGSEAALFAGDLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ RI ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ISGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIEICPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E + S KT++G G +IR+Y P V D R N+ +++GDL++ + Sbjct: 285 AE--SERSASRKTQVGSGDRSERIRTYNF-PQGRVTDHRINMTLYKLDRIMEGDLNELIN 341 Query: 349 ATLA 352 A ++ Sbjct: 342 ALIS 345 >gi|306844842|ref|ZP_07477425.1| peptide chain release factor 1 [Brucella sp. BO1] gi|306274774|gb|EFM56555.1| peptide chain release factor 1 [Brucella sp. BO1] Length = 359 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 35 LASEYSELQDVVGKIRELSDARKEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 92 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 327 KLDRVMEGDLDELVDALIS 345 >gi|227328865|ref|ZP_03832889.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 360 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 149/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LEV AG GG E+ +A L RMY+R+AE R+++ E + DGE G K I Sbjct: 107 DERGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWRVEVVSASDGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V V ++ +I+ +D RIDT Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + +G G +IR+Y P V D R N+ +V++G LD ++ Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQP 343 Query: 350 TL 351 + Sbjct: 344 VV 345 >gi|256384120|gb|ACU78690.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri str. GM12] gi|256384952|gb|ACU79521.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455380|gb|ADH21615.1| peptide chain release factor 1 [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 364 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 122/332 (36%), Positives = 189/332 (56%), Gaps = 19/332 (5%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELALEEDDCSI--- 84 ED ++ +++ + L +E+ +L+ + F+ K+ + + D ++LE +++ + Sbjct: 24 EDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAKVILENEKDQELIELAKI 83 Query: 85 -LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 L E +D ++ ++ +E E LL + D + +E+ AGG E+ +A LLRMY Sbjct: 84 ELDENNDKVEHLQQVIE----EMLLPKDPNDDKNVIVEIRGAAGGDEANIFAGDLLRMYK 139 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 +AE + +K LE GE G +IKG Y LK E G HR+ R+ ++ R Sbjct: 140 LYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQRVPKTEAKGRI 199 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TS +++ V P + + +EIEI +D RIDTYRASGAGGQHVNTTDSAVRITH+PTG+VV Sbjct: 200 QTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVRITHLPTGIVVT 258 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 Q RSQH NK A MLRAK+YE E++K++ A + K +G G +IR+Y P Sbjct: 259 SQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQ--AQADATRKNAVGTGARSEKIRTYNY-P 315 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V D R + V++G++D+F+ A + Sbjct: 316 QNRVTDHRVGLTLNKLDQVMEGNIDEFIIALI 347 >gi|313893571|ref|ZP_07827140.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str. F0412] gi|313441842|gb|EFR60265.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str. F0412] Length = 360 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 122/332 (36%), Positives = 187/332 (56%), Gaps = 12/332 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDD 81 L + DP + E + L R+ L + + + L +E+ +L+E+ Sbjct: 16 LEQRISDPEIIARQDEWRKLTRQHSQLSETVETFRTYKKVLAGLDEAMEVIEDKSLDEEF 75 Query: 82 CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + QE L+ K E+E K Q L D + +E+ GAGG E+ +A L RM Sbjct: 76 REMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEAALFAGDLFRM 135 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YT++AE + ++ E ++ ++ E G K ++G N Y +K E GVHR+ R+ ++ Sbjct: 136 YTKYAESQGWRCEIIDANEPELGGFKEVVFSVEGENVYSKMKFESGVHRVQRVPATETQG 195 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V P ++D ++IE++E D +IDTYRASGAGGQH+N T+SAVRITH+PTG+V Sbjct: 196 RVHTSTVTVAVLPEMED-VDIEVNEKDLKIDTYRASGAGGQHINKTESAVRITHLPTGIV 254 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ +RSQ KNK +A +LRAKL + Q E A++ K+++G G +IR+Y Sbjct: 255 VACQDQRSQLKNKDKAMRVLRAKLQDQAEQ--EAQASMAADRKSQVGTGDRSERIRTYNY 312 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R N+ VL+GDLD+ ++A Sbjct: 313 -PQGRVTDHRINLTLYKLDAVLNGDLDEIIQA 343 >gi|229588283|ref|YP_002870402.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25] gi|259585227|sp|C3KDC6|RF1_PSEFS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229360149|emb|CAY47006.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25] Length = 360 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE G K + Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N YG LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ +D R+DT Sbjct: 169 EGDNVYGKLKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q+ Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQT 285 Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 AN I K +G G +IR+Y + V D R N+ S ++L G +D ++ Sbjct: 286 SAAANAIASERKLLVGSGDRSERIRTYNFAQGR-VTDHRVNLTLYSLDEILAGGVDAVIE 344 Query: 349 ATLA 352 LA Sbjct: 345 PLLA 348 >gi|291617195|ref|YP_003519937.1| PrfA [Pantoea ananatis LMG 20103] gi|291152225|gb|ADD76809.1| PrfA [Pantoea ananatis LMG 20103] gi|327393650|dbj|BAK11072.1| peptide chain release factor 1 PrfA [Pantoea ananatis AJ13355] Length = 360 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D ++EV AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DERDCFVEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEIVSANEGEHGGYKEVIARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG K E G HR+ R+ +S R HTS ++ V P + ++ EI+ SD +IDT Sbjct: 167 MGEGAYGRFKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPEINPSDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + +G G +IR+Y P V D R N+ + ++G LD ++ Sbjct: 287 HEAE--ASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTIYRLDETMEGKLDSLIEP 343 Query: 350 TL 351 + Sbjct: 344 IV 345 >gi|163803585|ref|ZP_02197452.1| peptide chain release factor 1 [Vibrio sp. AND4] gi|159172627|gb|EDP57484.1| peptide chain release factor 1 [Vibrio sp. AND4] Length = 362 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 120/323 (37%), Positives = 182/323 (56%), Gaps = 11/323 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + N + + L +E L+ + Q + D+L E EDD + + + Sbjct: 25 DPDVIGNQDKFRALSKEYSQLEEVTQCFQAYQ-QAQDDLAAAEDMANEDDEEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+++AEK Sbjct: 84 IKEAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 RGWRIEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TLAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A +L A++ + E ++R A + ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMAVLAARIVQAEEERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFM 347 D R N+ ++V++GDL + Sbjct: 321 DHRINLTLYRLNEVMEGDLQSLI 343 >gi|308050535|ref|YP_003914101.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas balearica DSM 9799] gi|307632725|gb|ADN77027.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas balearica DSM 9799] Length = 360 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 105/242 (43%), Positives = 150/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D A++E+ AGAGG E+ +A LLRMY+R+AE++ + E + DGE G K Sbjct: 107 DDRSAFVEIRAGAGGDEAAIFAGDLLRMYSRYAEQKGWSVELMSASDGEHGGYKEVIAKF 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E G HR+ R+ +S R HTS ++ V P V ++ IEI+ +D ++DT Sbjct: 167 SGDSVYGELKFESGGHRVQRVPATESQGRIHTSACTVVVMPEVPEAEAIEINPADLKVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSAVRITH+PTG VV+CQ ERSQHKN+A+A +L A+L E +KR Sbjct: 227 FRASGAGGQHVNKTDSAVRITHLPTGTVVECQDERSQHKNRAKAMAVLSARLQAAEDEKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + ++ + G +IR+Y P V D R N+ ++V++G+L M+ Sbjct: 287 K--AEETSTRRSLVASGDRSERIRTYNY-PQGRVSDHRINLTLYRLTEVMEGELSALMQP 343 Query: 350 TL 351 L Sbjct: 344 IL 345 >gi|261323819|ref|ZP_05963016.1| peptide chain release factor 1 [Brucella neotomae 5K33] gi|261299799|gb|EEY03296.1| peptide chain release factor 1 [Brucella neotomae 5K33] Length = 372 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + ++A DD S ++E + +RI Sbjct: 48 LASEYSELQDVVGKIRELSDARMEAS---DVAAMRDDASTDAEMRALAVEELPEVEKRIA 104 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 105 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 164 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 165 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 224 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 225 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 282 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 283 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 339 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 340 KLDRVMEGDLDELVDALIS 358 >gi|225019405|ref|ZP_03708597.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum DSM 5476] gi|224947822|gb|EEG29031.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum DSM 5476] Length = 361 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 123/340 (36%), Positives = 194/340 (57%), Gaps = 14/340 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-----ILLEL 75 +R +N K DP++ + + LMRE +HL I +E + DNL +L E Sbjct: 13 KRFDEINEKLMDPNVVNDQHAYRDLMRELKHLTPIIDKYREYK-AAKDNLEEAKEMLSEG 71 Query: 76 ALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L+++ ++QE S++ Q I+ E + L + D D +E+ GAGG E+ +A Sbjct: 72 GLDKEFKEMVQEQYSESQQAIEDLGEELKILLLPTDPNDDKDVIIEIRGGAGGEEAALFA 131 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYT +AE + +KTE L ++ E G K + + G AY LK E GVHR+ R+ Sbjct: 132 YNLYRMYTMYAEAKGWKTEILSANETELGGFKEVSFEVSGEGAYSRLKFESGVHRVQRVP 191 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +++ R HTS ++ V P ++ +E +I+ +D ++DT+RASGAGGQHVN T+SA+R+T+ Sbjct: 192 ETEASGRIHTSTVTVAVLPEAEE-VEFDINPTDIQVDTFRASGAGGQHVNKTESAIRLTY 250 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNK +A +LR +LYE + +E I K ++G G + Sbjct: 251 LPTGLVVECQDERSQHKNKDKAMKILRTRLYEQAM--KEATDKIASERKAQVGTGDRSER 308 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P + D R + ++GD+D+ + A + Sbjct: 309 IRTYNY-PQGRITDHRIGLTLYHLEQNMNGDIDEIIDALI 347 >gi|332969013|gb|EGK08053.1| peptide chain release factor RF1 [Kingella kingae ATCC 23330] Length = 375 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 112/272 (41%), Positives = 166/272 (61%), Gaps = 10/272 (3%) Query: 88 TSDNLQRIKLEVEYKQFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTR 143 ++ ++ K+++E FE LL +AD + + ++E+ AG GG E+ +A LLRMY+R Sbjct: 95 AAEEIEATKIKIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSR 154 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE+ +++TE + + + G K + + G AY LK E G HR+ R+ +S R H Sbjct: 155 FAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGHRVQRVPATESQGRIH 214 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS ++ V P D+ EI+++ +D RIDT+RASGAGGQH+N TDSA+RITH+PTG+VV+C Sbjct: 215 TSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDSAIRITHLPTGMVVEC 274 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q RSQH NKAQA +L A+L + QKRE A K+ IG G +IR+Y P Sbjct: 275 QDGRSQHANKAQAMKVLAARLN--DKQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQ 331 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R N+ V+DGD+++ A +A Sbjct: 332 GRVTDHRINLTLHKLDFVMDGDMEEITSALIA 363 >gi|220933707|ref|YP_002512606.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7] gi|254790905|sp|B8GLA1|RF1_THISH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219995017|gb|ACL71619.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7] Length = 361 Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 105/242 (43%), Positives = 151/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D ++ +LE+ AG GG E+ +A L RMY+R+AE + ++ E L +GE G K + Sbjct: 109 DHSNLFLEIRAGTGGDEAAIFAGDLFRMYSRYAENQGWQVEILSQSEGEHGGYKEVIARL 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ V P D+ EI+ +D R+DT Sbjct: 169 IGAGAYSRLKFESGAHRVQRVPATESQGRIHTSAATVAVMPEPDEVEAPEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSA+R+TH+PTG+VV+CQ ERSQHKN+A+A ++L AKL+E E Q R Sbjct: 229 YRASGAGGQHVNKTDSAIRLTHLPTGIVVECQDERSQHKNRARAMSLLAAKLFEAE-QAR 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ A + K+ +G G +IR+Y P + D R N+ V+ GDLD ++ Sbjct: 288 QQ-AEQSATRKSLVGSGDRSERIRTYNF-PQGRITDHRINLTLYKLDAVMAGDLDPVIEP 345 Query: 350 TL 351 + Sbjct: 346 LI 347 >gi|78044074|ref|YP_361356.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans Z-2901] gi|119361519|sp|Q3A928|RF1_CARHZ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|77996189|gb|ABB15088.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans Z-2901] Length = 358 Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 122/327 (37%), Positives = 187/327 (57%), Gaps = 17/327 (5%) Query: 32 DPHLWQNVIEAKMLMRE-RQHLDNAISFIKEIQD--RLCDNLILLELALEEDDCSILQET 88 D WQ ++A + E Q +KEI+D R+ D L+ D ++Q Sbjct: 27 DTQRWQGYVKAHAEIEEIVQVYREYKKTVKEIEDAERMLDE------KLDPDFRELVQSE 80 Query: 89 SDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 +L+ + E+E K LL + D + +E+ AGAGG E+ +A L RMY+++A++ Sbjct: 81 LHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAGDLFRMYSKYADR 140 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K E ++ H + G K I+G Y +K E GVHR+ R+ +S R HTS + Sbjct: 141 MGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGVHRVQRVPTTESGGRIHTSTA 200 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P ++ +E+EI+ +D RID + ASGAGGQHVN T+SAVRITHIPTG+VV CQ E+ Sbjct: 201 TVAVLPEAEE-VEVEINPNDLRIDVFCASGAGGQHVNKTESAVRITHIPTGIVVTCQDEK 259 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNK +A +LRA+L L+ ++E+ A + + K+++G G +IR+Y P V Sbjct: 260 SQHKNKERAMKILRARL--LDKARQEQEAELASARKSQVGTGDRSERIRTYNF-PQNRVT 316 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R + VL+GDLD+ + A + Sbjct: 317 DHRIGLTLHRLDAVLEGDLDEIIDALI 343 >gi|20806672|ref|NP_621843.1| peptide chain release factor 1 [Thermoanaerobacter tengcongensis MB4] gi|22096035|sp|Q8RD98|RF1_THETN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|20515122|gb|AAM23447.1| Protein chain release factor A [Thermoanaerobacter tengcongensis MB4] Length = 356 Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 121/332 (36%), Positives = 189/332 (56%), Gaps = 10/332 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ K DP++ NV E + ++E +++ + +E + L + EL +D+ Sbjct: 15 LSQKISDPNVISNVEEWRKYVKEHAAIEDIVLKYREYKKVLEEIKATEELLSSQDEELKE 74 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYT 142 + Q + + + + +L D ND +E+ AGAGG E+ +A L RMYT Sbjct: 75 MAEEELSQLEEKKEKLMEEIKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAYDLFRMYT 134 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 +AEK+ +K E + + + G K I G AY LK E GVHR+ RI ++ R Sbjct: 135 MYAEKKGWKVEIMSANKTDIGGFKEVIFSISGKGAYSRLKYESGVHRVQRIPTTEAGGRI 194 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS +++ V P ++ +++EI+ +D +ID +R+SG GGQ VNTTDSAVR+THIPTG+VV Sbjct: 195 HTSTATVAVLPEAEE-VDVEINPNDIKIDVFRSSGHGGQSVNTTDSAVRVTHIPTGIVVT 253 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 CQ ERSQ +N+ +A +LRAKLYE+ L +E+ I E+ K+++G G +IR+Y P Sbjct: 254 CQDERSQIQNRERALKILRAKLYEMAL--KEQQREIAEARKSQVGTGERSERIRTYNF-P 310 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V D R + +VLDG+LD+ + A + Sbjct: 311 QGRVTDHRIGLTLYKLQEVLDGELDEIIDALI 342 >gi|298497806|ref|ZP_07007613.1| peptide chain release factor 1 [Vibrio cholerae MAK 757] gi|297542139|gb|EFH78189.1| peptide chain release factor 1 [Vibrio cholerae MAK 757] Length = 362 Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 121/346 (34%), Positives = 191/346 (55%), Gaps = 11/346 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L ++ V+R + DP + + + + L +E L+ + Q + ++L+ Sbjct: 6 LSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVA 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGT 128 E +EDD + + D ++ K +E E +L D ND +LE+ AGAGG Sbjct: 65 AEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G H Sbjct: 125 EAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDS Sbjct: 185 RVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG- 307 A+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR A I ++ + +G Sbjct: 245 AIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR--AAEISDTRRNLLGS 302 Query: 308 --WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + ++V++GD+ + + Sbjct: 303 RDRSDRIRTYNY-PQGRVSDHRIILTVYRLTEVMEGDMQSLIDPVI 347 >gi|240849863|ref|YP_002971251.1| peptide chain release factor 1 [Bartonella grahamii as4aup] gi|240266986|gb|ACS50574.1| peptide chain release factor 1 [Bartonella grahamii as4aup] Length = 358 Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 115/274 (41%), Positives = 165/274 (60%), Gaps = 17/274 (6%) Query: 91 NLQRIKLEVEYK---QFES------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 NL + +L + YK QFE L AD +A +E+ AG GG+E+ ++ L RMY Sbjct: 77 NLAQEELPLLYKKVEQFEKELQILLLPKDVADEKNAIVEIRAGTGGSEAALFSGDLFRMY 136 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+A +K E + + +GE G K I G + LK E GVHR+ RI ++ R Sbjct: 137 ERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKYESGVHRVQRIPETETGGR 196 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P ++ I+I+I D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Sbjct: 197 IHTSAATVAVLPEAEE-IDIDIRPEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV 255 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 Q E+SQH+N+A+A +LRA+L+++E QK E + S K+++G G +IR+Y Sbjct: 256 -VQAEKSQHQNRARALQILRARLFDIERQKAE--SERSASRKSQVGSGDRSERIRTYNF- 311 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R N+ +L+GDLD+ + A ++ Sbjct: 312 PQGRVTDHRINLTLYKLDRILEGDLDELLHALIS 345 >gi|215486443|ref|YP_002328874.1| peptide chain release factor 1 [Escherichia coli O127:H6 str. E2348/69] gi|312966451|ref|ZP_07780673.1| peptide chain release factor 1 [Escherichia coli 2362-75] gi|254790880|sp|B7UQ99|RF1_ECO27 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|215264515|emb|CAS08882.1| peptide chain release factor RF-1 [Escherichia coli O127:H6 str. E2348/69] gi|312288904|gb|EFR16802.1| peptide chain release factor 1 [Escherichia coli 2362-75] Length = 360 Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 112/272 (41%), Positives = 162/272 (59%), Gaps = 10/272 (3%) Query: 80 DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 DD + + D L+ K + E +Q LL D +A+LEV AG GG E+ +A Sbjct: 70 DDPEMREMAQDELREAKEKSEQLEQQLHVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 130 DLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+ Sbjct: 190 TESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI--- 312 PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRN 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 R+Y P V D R N+ +V++G LD Sbjct: 308 RTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|314935933|ref|ZP_07843283.1| peptide chain release factor 1 [Staphylococcus hominis subsp. hominis C80] gi|313655939|gb|EFS19681.1| peptide chain release factor 1 [Staphylococcus hominis subsp. hominis C80] Length = 358 Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 192/346 (55%), Gaps = 15/346 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + ++ + + + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60 Query: 72 LLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 + E+ E DD +L+E + L+ E+E +Q + LL D D +E+ A AG Sbjct: 61 IDEMLTETDDKEEIEMLKEEASGLKGELPELE-EQLKFLLIPKDPNDEKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LLRMYT++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIE+ D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEVRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG++ E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHIPTGIIA-TSSEKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G ++R+Y P V D R + +++G LD+ + A Sbjct: 296 GTGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDA 340 >gi|163759877|ref|ZP_02166961.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43] gi|162282835|gb|EDQ33122.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43] Length = 361 Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 119/306 (38%), Positives = 180/306 (58%), Gaps = 24/306 (7%) Query: 66 LCDNLILLELALEE--DDCSILQETSDNLQ------------RIKLEVEYKQFESLL--S 109 L D + L+ AL E D ++LQ+T+++ + ++++ +Q E +L Sbjct: 45 LVDQIRALDAALAERSDLEAMLQDTANDKEMRDLAESELRSTKVRIGELEEQIEIMLLPK 104 Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 AD A LE+ AG GG+E+ +A L RMY R+A RK+K E L +GE G K Sbjct: 105 DAADERSAILEIRAGTGGSEAALFAGDLFRMYERYASSRKWKVEVLSASEGEAGGYKEII 164 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 I G + LK E GVHR+ R+ +S R HTS +++ V P +D I+IE+ D R Sbjct: 165 ATISGKGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-IDIEVRSEDIR 223 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDT RASGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+A+A +LRA+LY++E Sbjct: 224 IDTMRASGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHQNRARAMQVLRARLYDMER 282 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 Q+ ++ +S ++++G G +IR+Y P V D R N+ ++ G++D+ Sbjct: 283 QRADD--ERSQSRRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMMGEIDEV 339 Query: 347 MKATLA 352 + A ++ Sbjct: 340 VDALIS 345 >gi|330811719|ref|YP_004356181.1| peptide chain release factor 1 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379827|gb|AEA71177.1| Peptide chain release factor 1 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 360 Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 122/315 (38%), Positives = 183/315 (58%), Gaps = 24/315 (7%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K L++ + L+ A + +K+ + + E+A+EE ++E D L +E+E Sbjct: 53 KQLLKVQGDLEGAQALLKD------SDPDMREMAVEE-----VREAKDQL----VELESS 97 Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 98 LQRMLLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K ++G N YG LK E G HR+ R+ +S R HTS ++ V P D+ I Sbjct: 158 HGGYKEVIARVEGDNVYGKLKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAI 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A L Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMAWLS 277 Query: 282 AKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 AKL + Q+ AN I K +G G +IR+Y + V D R N+ S + Sbjct: 278 AKLND---QQTSAAANAIASERKLLVGSGDRSERIRTYNFAQGR-VTDHRVNLTLYSLDE 333 Query: 338 VLDGDLDDFMKATLA 352 +L G +D ++ LA Sbjct: 334 ILAGGVDAVIEPLLA 348 >gi|145639103|ref|ZP_01794711.1| peptide chain release factor 1 [Haemophilus influenzae PittII] gi|145272075|gb|EDK11984.1| peptide chain release factor 1 [Haemophilus influenzae PittII] gi|309751054|gb|ADO81038.1| Peptide chain release factor 1 [Haemophilus influenzae R2866] Length = 361 Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 103/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE +++ E L ++ E+ G K +L+ Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVINGKIDELIQP 344 Query: 350 TL 351 + Sbjct: 345 II 346 >gi|240147055|ref|ZP_04745656.1| peptide chain release factor 1 [Roseburia intestinalis L1-82] gi|257200778|gb|EEU99062.1| peptide chain release factor 1 [Roseburia intestinalis L1-82] gi|291535754|emb|CBL08866.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia intestinalis M50/1] Length = 357 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 124/348 (35%), Positives = 200/348 (57%), Gaps = 12/348 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68 +FD ++ + R L ++ +P + + + + LM+E+ L NA K+ + + D Sbjct: 1 MFDKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIED 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +L LLE +E+ + +E +D+ R++ + + L D + +E+ AGAGG Sbjct: 61 SLALLEEESDEEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R +KTE +E + G+KS T ++ G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P ++ ++++I + D RID RASGAGGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVQIDDKDIRIDVCRASGAGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR KLY+LE QK + E K+++G Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQKAHDAE--AELRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R N+ +++GD+ + + A +A Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIA 344 >gi|269926759|ref|YP_003323382.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC BAA-798] gi|269790419|gb|ACZ42560.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC BAA-798] Length = 355 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 128/350 (36%), Positives = 192/350 (54%), Gaps = 30/350 (8%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 DN +R L+ DP ++ + + RER L++ +S +E + ++L Sbjct: 5 LDNIEKRFDELDRMMSDPEIFSDPSRLMEVARERSELEDIVSLYREYKK--------VKL 56 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFE------------SLLSGEA-DSNDAYLEVH 122 EED L E D R E EY+Q +LL + D D +E+ Sbjct: 57 TREED--RRLMEDPDPDIRQMAEEEYEQLADREKDLEERLKIALLPKDPNDEKDVIVEIR 114 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GG E+ +A L RMYTR+AE++ +KTE L + + G K +KG AY LK Sbjct: 115 AGTGGEEAALFAADLYRMYTRYAERQGWKTEVLSTSESDAGGFKEIIFEVKGRGAYSRLK 174 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S R HTS +++ V P ++ +E+EI D RID +R++G GGQ Sbjct: 175 YESGVHRVQRVPVTESQGRIHTSTATVAVLPEAEE-VEVEIDPEDLRIDVFRSTGHGGQS 233 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ E+SQ KN+A+A +LRA+LYE+E +K +G+ Sbjct: 234 VNTTDSAVRITHLPTGLVVTCQDEKSQLKNRAKAMAVLRARLYEMERRK--REEELGQVR 291 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ +G G +IR+Y P V D R ++ +LDG++D +++ Sbjct: 292 RSMVGTGERSEKIRTYNF-PQDRVTDHRIKESFSNLPAILDGEIDRIIES 340 >gi|256059849|ref|ZP_05450036.1| peptide chain release factor 1 [Brucella neotomae 5K33] Length = 359 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + ++A DD S ++E + +RI Sbjct: 35 LASEYSELQDVVGKIRELSDARMEAS---DVAAMRDDASTDAEMRALAVEELPEVEKRIA 91 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 92 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++GDLD+ + A ++ Sbjct: 327 KLDRVMEGDLDELVDALIS 345 >gi|209965909|ref|YP_002298824.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW] gi|209959375|gb|ACJ00012.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW] Length = 360 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 127/331 (38%), Positives = 189/331 (57%), Gaps = 18/331 (5%) Query: 34 HLWQNVIEAKMLMRERQH---LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 L + ++ +R Q L+ + I E++ D L +A E DD + D Sbjct: 25 QLASGTLSGEVFVRSSQEYAELEPVATAIAELRRARADMADLQAMA-EGDDAEMATLARD 83 Query: 91 NL----QRIKLEVEYKQFESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 L +RI E+E + +LL EAD +A LEV AG GG E+ +A L MY R+A Sbjct: 84 ELVEADRRIP-ELERRIMLALLPKDEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYA 142 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + ++ E +E+++ G K A+ I G N + LK E GVHR+ R+ ++ R HTS Sbjct: 143 GIQGWRFETIEVNETGLGGYKEASASITGRNVFRRLKFESGVHRVQRVPETEAGGRIHTS 202 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 +++ V P ++ ++I I E D RID +R+ G+GGQ VNTTDSAVRITH+PT +VVQCQ Sbjct: 203 AATVAVLPEAEE-VDIHIEEKDLRIDVFRSQGSGGQSVNTTDSAVRITHLPTNIVVQCQD 261 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 E+SQHKNKA+A +LRA+LYE+E Q+R+ + S +T++G G +IR+Y P Sbjct: 262 EKSQHKNKAKALKVLRARLYEIERQRRD--SERAASRRTQVGSGDRSERIRTYNF-PQGR 318 Query: 323 VKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 V D R N+ V+ G+ LD+ + A +A Sbjct: 319 VTDHRINLTLYKIDKVMAGEALDELVDALVA 349 >gi|320174901|gb|EFW50020.1| Peptide chain release factor 1 [Shigella dysenteriae CDC 74-1112] Length = 360 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGCLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|116749148|ref|YP_845835.1| peptide chain release factor 1 [Syntrophobacter fumaroxidans MPOB] gi|166977370|sp|A0LIZ8|RF1_SYNFM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116698212|gb|ABK17400.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobacter fumaroxidans MPOB] Length = 355 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 126/346 (36%), Positives = 189/346 (54%), Gaps = 18/346 (5%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68 +FD ++ Q+ L +P L N E + + RE + A K + +L D Sbjct: 1 MFDRLESVAQKFRKLEEDLSNPELLANQKEYQKIAREHAEIAPIVEAYGLYKGLHRQLLD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAG 124 N LLE +E D + + + +K ++E + L+ D ND LE+ AG Sbjct: 61 NQQLLE---QETDPEMRELFRQEIAELKRQIEDTENGLKLMLAPRDPNDDKNVILEIRAG 117 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG E+ + + L RMYTR+AE R++K E L+ H G+K + G AY LK E Sbjct: 118 TGGEEAALFVSDLFRMYTRYAELRRWKVEILDSHQTGIGGLKEVIAAVNGQGAYSRLKFE 177 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +GVHR+ R+ +S R HTS ++ V P ++ +++ I +D R+D +R+SG GGQ VN Sbjct: 178 RGVHRVQRVPVTESQGRIHTSAVTVAVLPEAEE-VDVYIDPNDLRVDVFRSSGPGGQSVN 236 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+THIP+G+VV CQ E+SQHKNKA+A +LRA+L L+ + E+ A I K+ Sbjct: 237 TTDSAVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRARL--LDQMQSEQEARIARDRKS 294 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++G G +IR+Y P V D R N+ +L G LD+ + Sbjct: 295 QVGTGDRSERIRTYNF-PQNRVSDHRINLTLYKLDIILGGALDEII 339 >gi|167855820|ref|ZP_02478572.1| peptide chain release factor 1 [Haemophilus parasuis 29755] gi|219871001|ref|YP_002475376.1| peptide chain release factor 1 [Haemophilus parasuis SH0165] gi|254790883|sp|B8F526|RF1_HAEPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167853033|gb|EDS24295.1| peptide chain release factor 1 [Haemophilus parasuis 29755] gi|219691205|gb|ACL32428.1| peptide chain release factor 1 [Haemophilus parasuis SH0165] Length = 360 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 112/279 (40%), Positives = 171/279 (61%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAY---LEVHAGAGGTESQDWAN 135 DD + + ++ ++ K E+E +Q +L D ND Y LE+ AG GG E+ +A Sbjct: 70 DDPDMKEIAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE ++++ E L ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 130 DLYRMYSRYAESKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKNKA+A +L +++ ++E +K+ + ++ + +G G +I Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQ--EQADTRRNLLGSGDRSDKI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++G +D+ ++ + Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|269123393|ref|YP_003305970.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM 12112] gi|268314719|gb|ACZ01093.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM 12112] Length = 358 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 105/244 (43%), Positives = 155/244 (63%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ + + + RM+TR+AE+ K+KTE ++ ++ G+K T LI Sbjct: 106 DEKNVIVELRAGAGGDEAALFVSDIFRMFTRYAERNKWKTEIIDKNEIGVGGLKEITFLI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +++ R HTS ++ V P +DD ++ I+ SD +IDT Sbjct: 166 SGKGAYSRLKFESGVHRVQRVPDTEASGRIHTSTITVAVLPEIDDVEQVAINPSDLQIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITH PTG+VV Q RSQ KNK A +L +KLYE+E++K+ Sbjct: 226 YRSSGAGGQHVNTTDSAVRITHKPTGIVVTSQDGRSQIKNKEAAMKVLASKLYEIEVEKQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +++ ++++G G +IR+Y P V D R + +LDG LD+ + A Sbjct: 286 R--SSVEAERRSQVGTGDRSEKIRTYNY-PQGRVTDHRIKLTLHRLDAILDGALDEIIDA 342 Query: 350 TLAI 353 +A Sbjct: 343 LIAF 346 >gi|225075789|ref|ZP_03718988.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens NRL30031/H210] gi|224952871|gb|EEG34080.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens NRL30031/H210] Length = 358 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P + D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRITDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|167038767|ref|YP_001661752.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514] gi|300913648|ref|ZP_07130965.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561] gi|307723337|ref|YP_003903088.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513] gi|238687578|sp|B0K1F7|RF1_THEPX RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166853007|gb|ABY91416.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514] gi|300890333|gb|EFK85478.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561] gi|307580398|gb|ADN53797.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513] Length = 356 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 121/336 (36%), Positives = 193/336 (57%), Gaps = 10/336 (2%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R L+ K DP++ NV E + ++E +++ + +E + L D EL D+ Sbjct: 11 RYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKELLSSNDE 70 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLL 138 + Q + + + + +L D ND +E+ AGAGG E+ +A+ L Sbjct: 71 ELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAALFAHDLF 130 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY+ +AEK+ +K E + ++ + G K L I G +Y LK E GVHR+ R+ ++ Sbjct: 131 RMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESGVHRVQRVPTTEA 190 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS +++ V P V++ +++EI+ +D ++D +R+ G GGQ VNTTDSAVR+THIPTG Sbjct: 191 GGRIHTSTATVAVLPEVEE-VDVEINPNDIKVDVFRSGGHGGQSVNTTDSAVRVTHIPTG 249 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VV CQ ERSQ +N+ +A +LRAKLYE+ LQ+++ I E+ K+++G G +IR+Y Sbjct: 250 IVVTCQDERSQIQNRERALKILRAKLYEMALQEQQR--EIAETRKSQVGTGERSERIRTY 307 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V D R + +VLDGDLD+ + A + Sbjct: 308 NY-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 342 >gi|218689158|ref|YP_002397370.1| peptide chain release factor 1 [Escherichia coli ED1a] gi|254790882|sp|B7MTZ5|RF1_ECO81 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|218426722|emb|CAR07559.1| peptide chain release factor RF-1 [Escherichia coli ED1a] Length = 360 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYCLDEVMEGKLD 338 >gi|323187441|gb|EFZ72750.1| peptide chain release factor 1 [Escherichia coli RN587/1] Length = 360 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|294669176|ref|ZP_06734256.1| peptide chain release factor 1 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308808|gb|EFE50051.1| peptide chain release factor 1 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 358 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 +++ A +A Sbjct: 337 MEEITNALIA 346 >gi|291538249|emb|CBL11360.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia intestinalis XB6B4] Length = 358 Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 124/348 (35%), Positives = 200/348 (57%), Gaps = 12/348 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68 +FD ++ + R L ++ +P + + + + LM+E+ L NA K+ + + D Sbjct: 1 MFDKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIED 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +L LLE +E+ + +E +D+ R++ + + L D + +E+ AGAGG Sbjct: 61 SLALLEEESDEEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R +KTE +E + G+KS T ++ G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P ++ ++++I + D RID RASGAGGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVQIDDKDIRIDVCRASGAGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR KLY+LE QK + E K+++G Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQKAHDAE--AELRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R N+ +++GD+ + + A +A Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIA 344 >gi|325128768|gb|EGC51631.1| peptide chain release factor 1 [Neisseria meningitidis N1568] Length = 358 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|261867616|ref|YP_003255538.1| peptide chain release factor 1 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412948|gb|ACX82319.1| peptide chain release factor 1 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 360 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 105/243 (43%), Positives = 155/243 (63%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K L+ Sbjct: 107 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELLESEMPEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L + Q++ Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQ---QEQ 283 Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E++A ++ + +G G +IR+Y P V D R N+ +V++G +DD ++ Sbjct: 284 EKLAQEQADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQ 342 Query: 349 ATL 351 + Sbjct: 343 PII 345 >gi|82544335|ref|YP_408282.1| peptide chain release factor 1 [Shigella boydii Sb227] gi|187734065|ref|YP_001879994.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94] gi|119361607|sp|Q31ZQ4|RF1_SHIBS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238691757|sp|B2TZV9|RF1_SHIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|81245746|gb|ABB66454.1| peptide chain release factor RF-1 [Shigella boydii Sb227] gi|187431057|gb|ACD10331.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94] gi|320185614|gb|EFW60376.1| Peptide chain release factor 1 [Shigella flexneri CDC 796-83] gi|332094801|gb|EGI99845.1| peptide chain release factor 1 [Shigella boydii 3594-74] Length = 360 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|293602161|ref|ZP_06684612.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC 43553] gi|292819431|gb|EFF78461.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC 43553] Length = 356 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 125/337 (37%), Positives = 182/337 (54%), Gaps = 11/337 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL+ ++ P ++ + L RER L+ + R ++L + L + D Sbjct: 11 RLTEVDALLAQPETASDMDRFRKLSRERAELEPVVEAFTAFA-RTEEDLATAQEMLSDPD 69 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLL 138 + E R+KLE + LL D ND +LE+ AG GG ES ++ LL Sbjct: 70 MKAMAEDEIKTGRVKLE-SLESALQLLLLPRDPNDGRSVFLEIRAGTGGDESALFSGDLL 128 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+AE R ++ E + E G K I G AYG LK E G HR+ R+ ++ Sbjct: 129 RMYTRYAETRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVPATEA 188 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ V D+ EI I+ +D RIDT+RASGAGGQH+N TDSAVRITH+PTG Sbjct: 189 QGRIHTSACTVAVMAEADEMSEIVINANDLRIDTFRASGAGGQHINKTDSAVRITHLPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VV+CQ +RSQH+NK +A +L A+L + E ++R+ + K+ IG G +IR+Y Sbjct: 249 LVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQ--SKEAAERKSLIGTGDRSERIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R N+ +++GDL++ A +A Sbjct: 307 NF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIA 342 >gi|256023112|ref|ZP_05436977.1| peptide chain release factor 1 [Escherichia sp. 4_1_40B] Length = 360 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|15677534|ref|NP_274690.1| peptide chain release factor 1 [Neisseria meningitidis MC58] gi|20139351|sp|Q9JY93|RF1_NEIMB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|7226940|gb|AAF42034.1| peptide chain release factor 1 [Neisseria meningitidis MC58] gi|325134780|gb|EGC57417.1| peptide chain release factor 1 [Neisseria meningitidis M13399] gi|325199720|gb|ADY95175.1| peptide chain release factor 1 [Neisseria meningitidis H44/76] gi|325205597|gb|ADZ01050.1| peptide chain release factor 1 [Neisseria meningitidis M04-240196] Length = 358 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|302380176|ref|ZP_07268648.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3] gi|302311959|gb|EFK93968.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3] Length = 355 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 120/340 (35%), Positives = 194/340 (57%), Gaps = 11/340 (3%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + D+ V + L K DP + ++ LM+E L+ ++ +D L + E Sbjct: 4 NLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEEDKE 63 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTES 130 L D + + D + ++ ++E Q E +L D ND ++E+ AGAGG E+ Sbjct: 64 LLGTTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LLRMY +++K+ + TE ++I GIK +++KG AY LK E GVHR+ Sbjct: 124 GLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S+ R HTS +++ V P +D ++++I + D RID +RASG GGQ VNTTDSAV Sbjct: 184 QRVPQTESSGRIHTSTATVAVLPEAED-VDVKIEQKDLRIDVFRASGNGGQCVNTTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV CQ E+SQ KNK +A +L+++L+ +L + E+ + ++ K+++G G Sbjct: 243 RITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLF--DLMEEEKNKDRADARKSQVGTGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P + D R N + LDGD+++ + Sbjct: 301 RSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMI 339 >gi|327253901|gb|EGE65530.1| peptide chain release factor 1 [Escherichia coli STEC_7v] Length = 360 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|93355984|gb|ABF10073.1| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34] Length = 371 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 116/289 (40%), Positives = 168/289 (58%), Gaps = 18/289 (6%) Query: 66 LCDNLILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D+ + E A +E D + LQ ++LQ + L + +LL LE+ A Sbjct: 79 LLDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLL----------LEIRA 128 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG ES +A LLRMYTR+AE+R+++ E + + G K + I G A+ LK Sbjct: 129 GTGGEESALFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKF 188 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ V P D+ E+EI+ SD R+DT+RASGAGGQHV Sbjct: 189 ESGGHRVQRVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHV 248 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A +L A++ +++L R A + + Sbjct: 249 NKTDSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQL--RAAQAKEANTRR 306 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 IG G +IR+Y P V D R N+ ++DGDLD+ + A Sbjct: 307 NLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLDELISA 354 >gi|15830970|ref|NP_309743.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. Sakai] gi|16129174|ref|NP_415729.1| peptide chain release factor RF-1 [Escherichia coli str. K-12 substr. MG1655] gi|24112610|ref|NP_707120.1| peptide chain release factor 1 [Shigella flexneri 2a str. 301] gi|26247534|ref|NP_753574.1| peptide chain release factor 1 [Escherichia coli CFT073] gi|30062735|ref|NP_836906.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T] gi|74312449|ref|YP_310868.1| peptide chain release factor 1 [Shigella sonnei Ss046] gi|82776551|ref|YP_402900.1| peptide chain release factor 1 [Shigella dysenteriae Sd197] gi|89108056|ref|AP_001836.1| peptide chain release factor RF-1 [Escherichia coli str. K-12 substr. W3110] gi|91210432|ref|YP_540418.1| peptide chain release factor 1 [Escherichia coli UTI89] gi|110641441|ref|YP_669171.1| peptide chain release factor 1 [Escherichia coli 536] gi|110805216|ref|YP_688736.1| peptide chain release factor 1 [Shigella flexneri 5 str. 8401] gi|117623429|ref|YP_852342.1| peptide chain release factor 1 [Escherichia coli APEC O1] gi|157158410|ref|YP_001462464.1| peptide chain release factor 1 [Escherichia coli E24377A] gi|157160716|ref|YP_001458034.1| peptide chain release factor 1 [Escherichia coli HS] gi|168750771|ref|ZP_02775793.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4113] gi|168758136|ref|ZP_02783143.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4401] gi|168764382|ref|ZP_02789389.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4501] gi|168771100|ref|ZP_02796107.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4486] gi|168776896|ref|ZP_02801903.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4196] gi|168782567|ref|ZP_02807574.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4076] gi|168787715|ref|ZP_02812722.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC869] gi|168801524|ref|ZP_02826531.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC508] gi|170020422|ref|YP_001725376.1| peptide chain release factor 1 [Escherichia coli ATCC 8739] gi|170080839|ref|YP_001730159.1| peptide chain release factor RF-1 [Escherichia coli str. K-12 substr. DH10B] gi|170682630|ref|YP_001743983.1| peptide chain release factor 1 [Escherichia coli SMS-3-5] gi|188494282|ref|ZP_03001552.1| peptide chain release factor 1 [Escherichia coli 53638] gi|191170894|ref|ZP_03032445.1| peptide chain release factor 1 [Escherichia coli F11] gi|193064852|ref|ZP_03045929.1| peptide chain release factor 1 [Escherichia coli E22] gi|193069953|ref|ZP_03050901.1| peptide chain release factor 1 [Escherichia coli E110019] gi|194426002|ref|ZP_03058558.1| peptide chain release factor 1 [Escherichia coli B171] gi|194434263|ref|ZP_03066529.1| peptide chain release factor 1 [Shigella dysenteriae 1012] gi|194437123|ref|ZP_03069222.1| peptide chain release factor 1 [Escherichia coli 101-1] gi|195939099|ref|ZP_03084481.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4024] gi|208807446|ref|ZP_03249783.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4206] gi|208816069|ref|ZP_03257248.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4045] gi|208822717|ref|ZP_03263036.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4042] gi|209398404|ref|YP_002270145.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4115] gi|209918452|ref|YP_002292536.1| peptide chain release factor 1 [Escherichia coli SE11] gi|217328218|ref|ZP_03444300.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. TW14588] gi|218549098|ref|YP_002382889.1| peptide chain release factor 1 [Escherichia fergusonii ATCC 35469] gi|218553765|ref|YP_002386678.1| peptide chain release factor 1 [Escherichia coli IAI1] gi|218558140|ref|YP_002391053.1| peptide chain release factor 1 [Escherichia coli S88] gi|218694725|ref|YP_002402392.1| peptide chain release factor 1 [Escherichia coli 55989] gi|218699918|ref|YP_002407547.1| peptide chain release factor 1 [Escherichia coli IAI39] gi|218704733|ref|YP_002412252.1| peptide chain release factor 1 [Escherichia coli UMN026] gi|227886367|ref|ZP_04004172.1| peptide chain release factor 1 [Escherichia coli 83972] gi|237705173|ref|ZP_04535654.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA] gi|238900442|ref|YP_002926238.1| peptide chain release factor RF-1 [Escherichia coli BW2952] gi|253773790|ref|YP_003036621.1| peptide chain release factor 1 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161293|ref|YP_003044401.1| peptide chain release factor 1 [Escherichia coli B str. REL606] gi|254792681|ref|YP_003077518.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. TW14359] gi|256018539|ref|ZP_05432404.1| peptide chain release factor 1 [Shigella sp. D9] gi|260843503|ref|YP_003221281.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str. 12009] gi|260854872|ref|YP_003228763.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str. 11368] gi|260867616|ref|YP_003234018.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str. 11128] gi|261224943|ref|ZP_05939224.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. FRIK2000] gi|261257200|ref|ZP_05949733.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. FRIK966] gi|291282236|ref|YP_003499054.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str. CB9615] gi|293404754|ref|ZP_06648746.1| peptide chain release factor 1 [Escherichia coli FVEC1412] gi|293409598|ref|ZP_06653174.1| peptide chain release factor 1 [Escherichia coli B354] gi|293414488|ref|ZP_06657137.1| peptide chain release factor 1 [Escherichia coli B185] gi|293433527|ref|ZP_06661955.1| peptide chain release factor 1 [Escherichia coli B088] gi|298380397|ref|ZP_06989996.1| peptide chain release factor 1 [Escherichia coli FVEC1302] gi|300816902|ref|ZP_07097122.1| peptide chain release factor 1 [Escherichia coli MS 107-1] gi|300821019|ref|ZP_07101168.1| peptide chain release factor 1 [Escherichia coli MS 119-7] gi|300896599|ref|ZP_07115118.1| peptide chain release factor 1 [Escherichia coli MS 198-1] gi|300906882|ref|ZP_07124556.1| peptide chain release factor 1 [Escherichia coli MS 84-1] gi|300921823|ref|ZP_07137980.1| peptide chain release factor 1 [Escherichia coli MS 182-1] gi|300928243|ref|ZP_07143780.1| peptide chain release factor 1 [Escherichia coli MS 187-1] gi|300939553|ref|ZP_07154210.1| peptide chain release factor 1 [Escherichia coli MS 21-1] gi|300951678|ref|ZP_07165502.1| peptide chain release factor 1 [Escherichia coli MS 116-1] gi|300955611|ref|ZP_07167968.1| peptide chain release factor 1 [Escherichia coli MS 175-1] gi|300971920|ref|ZP_07171708.1| peptide chain release factor 1 [Escherichia coli MS 45-1] gi|300995966|ref|ZP_07181328.1| peptide chain release factor 1 [Escherichia coli MS 200-1] gi|301017243|ref|ZP_07182024.1| peptide chain release factor 1 [Escherichia coli MS 69-1] gi|301046860|ref|ZP_07193977.1| peptide chain release factor 1 [Escherichia coli MS 185-1] gi|301305581|ref|ZP_07211672.1| peptide chain release factor 1 [Escherichia coli MS 124-1] gi|301327073|ref|ZP_07220355.1| peptide chain release factor 1 [Escherichia coli MS 78-1] gi|301648136|ref|ZP_07247889.1| peptide chain release factor 1 [Escherichia coli MS 146-1] gi|306813891|ref|ZP_07448064.1| peptide chain release factor 1 [Escherichia coli NC101] gi|307137826|ref|ZP_07497182.1| peptide chain release factor 1 [Escherichia coli H736] gi|307310034|ref|ZP_07589684.1| peptide chain release factor 1 [Escherichia coli W] gi|309789161|ref|ZP_07683754.1| peptide chain release factor 1 [Shigella dysenteriae 1617] gi|309794302|ref|ZP_07688726.1| peptide chain release factor 1 [Escherichia coli MS 145-7] gi|312971398|ref|ZP_07785573.1| peptide chain release factor 1 [Escherichia coli 1827-70] gi|331641741|ref|ZP_08342876.1| peptide chain release factor 1 [Escherichia coli H736] gi|331646529|ref|ZP_08347632.1| peptide chain release factor 1 [Escherichia coli M605] gi|331662614|ref|ZP_08363537.1| peptide chain release factor 1 [Escherichia coli TA143] gi|331667595|ref|ZP_08368459.1| peptide chain release factor 1 [Escherichia coli TA271] gi|331676991|ref|ZP_08377687.1| peptide chain release factor 1 [Escherichia coli H591] gi|331682700|ref|ZP_08383319.1| peptide chain release factor 1 [Escherichia coli H299] gi|332279599|ref|ZP_08392012.1| peptide chain release factor RF-1 [Shigella sp. D9] gi|67471891|sp|P0A7I0|RF1_ECOLI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|67471892|sp|P0A7I1|RF1_ECOL6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|67471893|sp|P0A7I2|RF1_ECO57 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|67471894|sp|P0A7I3|RF1_SHIFL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361536|sp|Q0TIF9|RF1_ECOL5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361537|sp|Q1RCM7|RF1_ECOUT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361608|sp|Q32GZ6|RF1_SHIDS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361609|sp|Q3Z0S9|RF1_SHISS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|122957490|sp|Q0T5I4|RF1_SHIF8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223555|sp|A1AAD8|RF1_ECOK1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166977361|sp|A7ZKY5|RF1_ECO24 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166977362|sp|A7ZZE7|RF1_ECOHS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039971|sp|B1IU82|RF1_ECOLC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739104|sp|B7MKB3|RF1_ECO45 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739105|sp|B7NUX7|RF1_ECO7I RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739106|sp|B7LXC6|RF1_ECO8A RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739107|sp|B7N422|RF1_ECOLU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739108|sp|B1LH89|RF1_ECOSM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739109|sp|B7LSH9|RF1_ESCF3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229576656|sp|B1XAQ2|RF1_ECODH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238058712|sp|B5YXM9|RF1_ECO5E RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238058713|sp|B6I9S6|RF1_ECOSE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790881|sp|B7LGX2|RF1_ECO55 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|259585238|sp|C4ZTQ2|RF1_ECOBW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|26107935|gb|AAN80134.1|AE016759_408 Peptide chain release factor 1 [Escherichia coli CFT073] gi|1651601|dbj|BAA36069.1| peptide chain release factor RF-1 [Escherichia coli str. K12 substr. W3110] gi|1787462|gb|AAC74295.1| peptide chain release factor RF-1 [Escherichia coli str. K-12 substr. MG1655] gi|13361181|dbj|BAB35139.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str. Sakai] gi|24051515|gb|AAN42827.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 301] gi|30040983|gb|AAP16713.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 2457T] gi|73855926|gb|AAZ88633.1| peptide chain release factor RF-1 [Shigella sonnei Ss046] gi|81240699|gb|ABB61409.1| peptide chain release factor RF-1 [Shigella dysenteriae Sd197] gi|91072006|gb|ABE06887.1| peptide chain release factor RF-1 [Escherichia coli UTI89] gi|110343033|gb|ABG69270.1| peptide chain release factor 1 [Escherichia coli 536] gi|110614764|gb|ABF03431.1| peptide chain release factor RF-1 [Shigella flexneri 5 str. 8401] gi|115512553|gb|ABJ00628.1| peptide chain release factor 1 [Escherichia coli APEC O1] gi|157066396|gb|ABV05651.1| peptide chain release factor 1 [Escherichia coli HS] gi|157080440|gb|ABV20148.1| peptide chain release factor 1 [Escherichia coli E24377A] gi|169755350|gb|ACA78049.1| peptide chain release factor 1 [Escherichia coli ATCC 8739] gi|169888674|gb|ACB02381.1| peptide chain release factor RF-1 [Escherichia coli str. K-12 substr. DH10B] gi|170520348|gb|ACB18526.1| peptide chain release factor 1 [Escherichia coli SMS-3-5] gi|187767792|gb|EDU31636.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4196] gi|188015105|gb|EDU53227.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4113] gi|188489481|gb|EDU64584.1| peptide chain release factor 1 [Escherichia coli 53638] gi|188999995|gb|EDU68981.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4076] gi|189354981|gb|EDU73400.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4401] gi|189360046|gb|EDU78465.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4486] gi|189365613|gb|EDU84029.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4501] gi|189372547|gb|EDU90963.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC869] gi|189376326|gb|EDU94742.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC508] gi|190908626|gb|EDV68214.1| peptide chain release factor 1 [Escherichia coli F11] gi|192927537|gb|EDV82154.1| peptide chain release factor 1 [Escherichia coli E22] gi|192956706|gb|EDV87161.1| peptide chain release factor 1 [Escherichia coli E110019] gi|194416057|gb|EDX32323.1| peptide chain release factor 1 [Escherichia coli B171] gi|194417494|gb|EDX33597.1| peptide chain release factor 1 [Shigella dysenteriae 1012] gi|194424106|gb|EDX40094.1| peptide chain release factor 1 [Escherichia coli 101-1] gi|208727247|gb|EDZ76848.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4206] gi|208732717|gb|EDZ81405.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4045] gi|208738202|gb|EDZ85885.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4042] gi|209159804|gb|ACI37237.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4115] gi|209772528|gb|ACI84576.1| peptide chain release factor RF-1 [Escherichia coli] gi|209772530|gb|ACI84577.1| peptide chain release factor RF-1 [Escherichia coli] gi|209772532|gb|ACI84578.1| peptide chain release factor RF-1 [Escherichia coli] gi|209772534|gb|ACI84579.1| peptide chain release factor RF-1 [Escherichia coli] gi|209772536|gb|ACI84580.1| peptide chain release factor RF-1 [Escherichia coli] gi|209911711|dbj|BAG76785.1| peptide chain release factor 1 [Escherichia coli SE11] gi|217318645|gb|EEC27071.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. TW14588] gi|218351457|emb|CAU97165.1| peptide chain release factor RF-1 [Escherichia coli 55989] gi|218356639|emb|CAQ89265.1| peptide chain release factor RF-1 [Escherichia fergusonii ATCC 35469] gi|218360533|emb|CAQ98091.1| peptide chain release factor RF-1 [Escherichia coli IAI1] gi|218364909|emb|CAR02605.1| peptide chain release factor RF-1 [Escherichia coli S88] gi|218369904|emb|CAR17679.1| peptide chain release factor RF-1 [Escherichia coli IAI39] gi|218431830|emb|CAR12715.1| peptide chain release factor RF-1 [Escherichia coli UMN026] gi|222033010|emb|CAP75750.1| Peptide chain release factor 1 [Escherichia coli LF82] gi|226899930|gb|EEH86189.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA] gi|227836571|gb|EEJ47037.1| peptide chain release factor 1 [Escherichia coli 83972] gi|238861984|gb|ACR63982.1| peptide chain release factor RF-1 [Escherichia coli BW2952] gi|242376990|emb|CAQ31713.1| peptide chain release factor RF1 [Escherichia coli BL21(DE3)] gi|253324834|gb|ACT29436.1| peptide chain release factor 1 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973194|gb|ACT38865.1| peptide chain release factor 1 [Escherichia coli B str. REL606] gi|253977408|gb|ACT43078.1| peptide chain release factor 1 [Escherichia coli BL21(DE3)] gi|254592081|gb|ACT71442.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str. TW14359] gi|257753521|dbj|BAI25023.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str. 11368] gi|257758650|dbj|BAI30147.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str. 12009] gi|257763972|dbj|BAI35467.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str. 11128] gi|260449654|gb|ACX40076.1| peptide chain release factor 1 [Escherichia coli DH1] gi|281178397|dbj|BAI54727.1| peptide chain release factor 1 [Escherichia coli SE15] gi|281600635|gb|ADA73619.1| Peptide chain release factor 1 [Shigella flexneri 2002017] gi|284921023|emb|CBG34088.1| peptide chain release factor 1 [Escherichia coli 042] gi|290762109|gb|ADD56070.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str. CB9615] gi|291324346|gb|EFE63768.1| peptide chain release factor 1 [Escherichia coli B088] gi|291426962|gb|EFE99988.1| peptide chain release factor 1 [Escherichia coli FVEC1412] gi|291434546|gb|EFF07519.1| peptide chain release factor 1 [Escherichia coli B185] gi|291470066|gb|EFF12550.1| peptide chain release factor 1 [Escherichia coli B354] gi|294493866|gb|ADE92622.1| peptide chain release factor 1 [Escherichia coli IHE3034] gi|298277839|gb|EFI19353.1| peptide chain release factor 1 [Escherichia coli FVEC1302] gi|300301228|gb|EFJ57613.1| peptide chain release factor 1 [Escherichia coli MS 185-1] gi|300304663|gb|EFJ59183.1| peptide chain release factor 1 [Escherichia coli MS 200-1] gi|300317504|gb|EFJ67288.1| peptide chain release factor 1 [Escherichia coli MS 175-1] gi|300359542|gb|EFJ75412.1| peptide chain release factor 1 [Escherichia coli MS 198-1] gi|300400374|gb|EFJ83912.1| peptide chain release factor 1 [Escherichia coli MS 69-1] gi|300401315|gb|EFJ84853.1| peptide chain release factor 1 [Escherichia coli MS 84-1] gi|300411045|gb|EFJ94583.1| peptide chain release factor 1 [Escherichia coli MS 45-1] gi|300421749|gb|EFK05060.1| peptide chain release factor 1 [Escherichia coli MS 182-1] gi|300449124|gb|EFK12744.1| peptide chain release factor 1 [Escherichia coli MS 116-1] gi|300455557|gb|EFK19050.1| peptide chain release factor 1 [Escherichia coli MS 21-1] gi|300463712|gb|EFK27205.1| peptide chain release factor 1 [Escherichia coli MS 187-1] gi|300526318|gb|EFK47387.1| peptide chain release factor 1 [Escherichia coli MS 119-7] gi|300530676|gb|EFK51738.1| peptide chain release factor 1 [Escherichia coli MS 107-1] gi|300839170|gb|EFK66930.1| peptide chain release factor 1 [Escherichia coli MS 124-1] gi|300846326|gb|EFK74086.1| peptide chain release factor 1 [Escherichia coli MS 78-1] gi|301073722|gb|EFK88528.1| peptide chain release factor 1 [Escherichia coli MS 146-1] gi|305852528|gb|EFM52976.1| peptide chain release factor 1 [Escherichia coli NC101] gi|306909752|gb|EFN40246.1| peptide chain release factor 1 [Escherichia coli W] gi|307553266|gb|ADN46041.1| peptide chain release factor 1 [Escherichia coli ABU 83972] gi|307627266|gb|ADN71570.1| peptide chain release factor 1 [Escherichia coli UM146] gi|308122207|gb|EFO59469.1| peptide chain release factor 1 [Escherichia coli MS 145-7] gi|308922915|gb|EFP68429.1| peptide chain release factor 1 [Shigella dysenteriae 1617] gi|309701510|emb|CBJ00817.1| peptide chain release factor 1 [Escherichia coli ETEC H10407] gi|310335995|gb|EFQ01195.1| peptide chain release factor 1 [Escherichia coli 1827-70] gi|312945841|gb|ADR26668.1| peptide chain release factor 1 [Escherichia coli O83:H1 str. NRG 857C] gi|313649400|gb|EFS13831.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T] gi|315060462|gb|ADT74789.1| peptide chain release factor RF-1 [Escherichia coli W] gi|315135847|dbj|BAJ43006.1| peptide chain release factor 1 [Escherichia coli DH1] gi|315288568|gb|EFU47966.1| peptide chain release factor 1 [Escherichia coli MS 110-3] gi|315290789|gb|EFU50161.1| peptide chain release factor 1 [Escherichia coli MS 153-1] gi|315297345|gb|EFU56625.1| peptide chain release factor 1 [Escherichia coli MS 16-3] gi|315615947|gb|EFU96573.1| peptide chain release factor 1 [Escherichia coli 3431] gi|320181782|gb|EFW56692.1| Peptide chain release factor 1 [Shigella boydii ATCC 9905] gi|320188003|gb|EFW62670.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. EC1212] gi|320195779|gb|EFW70404.1| Peptide chain release factor 1 [Escherichia coli WV_060327] gi|320199250|gb|EFW73841.1| Peptide chain release factor 1 [Escherichia coli EC4100B] gi|320637363|gb|EFX07170.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. G5101] gi|320643225|gb|EFX12426.1| peptide chain release factor 1 [Escherichia coli O157:H- str. 493-89] gi|320648162|gb|EFX16838.1| peptide chain release factor 1 [Escherichia coli O157:H- str. H 2687] gi|320653996|gb|EFX22070.1| peptide chain release factor 1 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659475|gb|EFX27044.1| peptide chain release factor 1 [Escherichia coli O55:H7 str. USDA 5905] gi|320664612|gb|EFX31763.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. LSU-61] gi|323153190|gb|EFZ39452.1| peptide chain release factor 1 [Escherichia coli EPECa14] gi|323162264|gb|EFZ48122.1| peptide chain release factor 1 [Escherichia coli E128010] gi|323168381|gb|EFZ54062.1| peptide chain release factor 1 [Shigella sonnei 53G] gi|323179274|gb|EFZ64844.1| peptide chain release factor 1 [Escherichia coli 1180] gi|323185627|gb|EFZ70988.1| peptide chain release factor 1 [Escherichia coli 1357] gi|323378974|gb|ADX51242.1| peptide chain release factor 1 [Escherichia coli KO11] gi|323937932|gb|EGB34196.1| peptide chain release 1 [Escherichia coli E1520] gi|323942490|gb|EGB38658.1| peptide chain release [Escherichia coli E482] gi|323947506|gb|EGB43510.1| peptide chain release 1 [Escherichia coli H120] gi|323949672|gb|EGB45558.1| peptide chain release [Escherichia coli H252] gi|323953934|gb|EGB49733.1| peptide chain release [Escherichia coli H263] gi|323962789|gb|EGB58367.1| peptide chain release [Escherichia coli H489] gi|323973391|gb|EGB68578.1| peptide chain release [Escherichia coli TA007] gi|323977218|gb|EGB72305.1| peptide chain release [Escherichia coli TW10509] gi|324006000|gb|EGB75219.1| peptide chain release factor 1 [Escherichia coli MS 57-2] gi|324015639|gb|EGB84858.1| peptide chain release factor 1 [Escherichia coli MS 60-1] gi|324017539|gb|EGB86758.1| peptide chain release factor 1 [Escherichia coli MS 117-3] gi|324117241|gb|EGC11148.1| peptide chain release [Escherichia coli E1167] gi|325497513|gb|EGC95372.1| peptide chain release factor 1 [Escherichia fergusonii ECD227] gi|326342759|gb|EGD66529.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1044] gi|326346388|gb|EGD70125.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1125] gi|330911076|gb|EGH39586.1| peptide chain release factor 1 [Escherichia coli AA86] gi|331038539|gb|EGI10759.1| peptide chain release factor 1 [Escherichia coli H736] gi|331045281|gb|EGI17408.1| peptide chain release factor 1 [Escherichia coli M605] gi|331061036|gb|EGI33000.1| peptide chain release factor 1 [Escherichia coli TA143] gi|331065180|gb|EGI37075.1| peptide chain release factor 1 [Escherichia coli TA271] gi|331075680|gb|EGI46978.1| peptide chain release factor 1 [Escherichia coli H591] gi|331080331|gb|EGI51510.1| peptide chain release factor 1 [Escherichia coli H299] gi|332092251|gb|EGI97328.1| peptide chain release factor 1 [Shigella boydii 5216-82] gi|332098194|gb|EGJ03167.1| peptide chain release factor 1 [Shigella dysenteriae 155-74] gi|332101951|gb|EGJ05297.1| peptide chain release factor RF-1 [Shigella sp. D9] gi|332757864|gb|EGJ88191.1| peptide chain release factor 1 [Shigella flexneri 4343-70] gi|332759429|gb|EGJ89737.1| peptide chain release factor 1 [Shigella flexneri 2747-71] gi|332760305|gb|EGJ90595.1| peptide chain release factor 1 [Shigella flexneri K-671] gi|332767445|gb|EGJ97639.1| peptide chain release factor 1 [Shigella flexneri 2930-71] gi|333005050|gb|EGK24570.1| peptide chain release factor 1 [Shigella flexneri VA-6] gi|333005356|gb|EGK24874.1| peptide chain release factor 1 [Shigella flexneri K-218] gi|333007544|gb|EGK27022.1| peptide chain release factor 1 [Shigella flexneri K-272] gi|333019207|gb|EGK38494.1| peptide chain release factor 1 [Shigella flexneri K-304] gi|333019924|gb|EGK39196.1| peptide chain release factor 1 [Shigella flexneri K-227] Length = 360 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|15801440|ref|NP_287457.1| peptide chain release factor 1 [Escherichia coli O157:H7 EDL933] gi|12514924|gb|AAG56069.1|AE005338_9 peptide chain release factor RF-1 [Escherichia coli O157:H7 str. EDL933] Length = 360 Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|114704325|ref|ZP_01437233.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506] gi|114539110|gb|EAU42230.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506] Length = 359 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 108/244 (44%), Positives = 153/244 (62%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+AE ++K E L +GE G K Sbjct: 107 ADEKGAILEIRAGTGGSEAGLFAGDLYRMYQRYAELNRWKVELLSASEGEVGGFKEVIAA 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG + LK E GVHR+ R+ +S R HTS +++ V P +D I+I++ D RID Sbjct: 167 IKGNGVFSRLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-IDIDVRNEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+AQA +L+AKLY++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRAQAMQVLKAKLYDMERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 ++ + K+++G G +IR+Y P V D R N+ V++G++++ + Sbjct: 285 YDD--ERSAARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDKVIEGEMEELVD 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALVA 345 >gi|160893851|ref|ZP_02074634.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50] gi|156864503|gb|EDO57934.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50] Length = 358 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 129/351 (36%), Positives = 203/351 (57%), Gaps = 18/351 (5%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +FD ++ V RL LN + DP + + + + LM+E+ L + KE +D + D Sbjct: 1 MFDKLEDLVDRLDTLNNQLTDPDIVSDQNKFRKLMKEQSELTPIVEKYKEYKDAKQTIED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAG 124 +L++LE +E+ + +E L K VE + E L DS + +E+ AG Sbjct: 61 SLLMLEEENDEELREMAKE---ELNEAKATVEKTENELKILLLPKDPNDSKNVIVEIRAG 117 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A + RMY ++ ++ K+K E + +++ G K A +I G AY +K E Sbjct: 118 AGGDEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYE 177 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ RI +S R HTS ++ V P ++ +++EI+E+D RID RASG GGQ VN Sbjct: 178 SGVHRVQRIPKTESGGRIHTSTVTVAVMPEAEE-VDVEINENDIRIDVMRASGNGGQCVN 236 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR+KLY++ELQK+ + K+ Sbjct: 237 TTDSAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAE--AADRKS 294 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IG G +IR+Y P V D R + +L+GDL++ + + +A Sbjct: 295 QIGTGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLEQILNGDLNEIIDSLIA 344 >gi|146283509|ref|YP_001173662.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501] gi|166223591|sp|A4VPB9|RF1_PSEU5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145571714|gb|ABP80820.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501] Length = 360 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/245 (43%), Positives = 151/245 (61%), Gaps = 12/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY+R+AEK+ ++ E L +GE G K + Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S R HTS ++ V P D+ +EI+ ++ RIDT Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A L AK LQ R Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAK-----LQDR 283 Query: 293 EEIA---NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ A I E+ K +G G +IR+Y P V D R N+ S ++V+ G ++ Sbjct: 284 QDAAAHKEISETRKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLNEVIGGAVEQV 342 Query: 347 MKATL 351 ++ L Sbjct: 343 IEPLL 347 >gi|28868324|ref|NP_790943.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato str. DC3000] gi|32171519|sp|Q888C1|RF1_PSESM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|28851561|gb|AAO54638.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato str. DC3000] Length = 360 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 122/314 (38%), Positives = 184/314 (58%), Gaps = 22/314 (7%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K L R + L+ A + +K+ + + E+A+EE ++ET L ++LE + + Sbjct: 53 KQLARVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQ 99 Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 100 RM--LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P D+ I Sbjct: 158 HGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPKTESQGRIHTSACTVAVLPEPDEQQAI 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLS 277 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 AKL + Q + I K +G G +IR+Y P V D R N+ S +V Sbjct: 278 AKLN--DQQTSAAASAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEV 334 Query: 339 LDGDLDDFMKATLA 352 L G +D ++ LA Sbjct: 335 LAGGVDAVIEPLLA 348 >gi|191166656|ref|ZP_03028484.1| peptide chain release factor 1 [Escherichia coli B7A] gi|190903305|gb|EDV63026.1| peptide chain release factor 1 [Escherichia coli B7A] Length = 321 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 68 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 127 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 128 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 187 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 188 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 247 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 248 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 299 >gi|228474912|ref|ZP_04059641.1| peptide chain release factor 1 [Staphylococcus hominis SK119] gi|228271144|gb|EEK12524.1| peptide chain release factor 1 [Staphylococcus hominis SK119] Length = 358 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 192/346 (55%), Gaps = 15/346 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + ++ + + + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60 Query: 72 LLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 + E+ E DD +L+E + L+ E+E +Q + LL D D +E+ A AG Sbjct: 61 IDEMLTETDDKEEIEMLKEEALGLKSELPELE-EQLKFLLIPKDPNDEKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LLRMYT++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIE+ D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEVRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG++ E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHIPTGIIA-TSSEKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G ++R+Y P V D R + +++G LD+ + A Sbjct: 296 GTGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDA 340 >gi|332529974|ref|ZP_08405924.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624] gi|332040447|gb|EGI76823.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624] Length = 369 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 129/344 (37%), Positives = 188/344 (54%), Gaps = 19/344 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 QRL LN + ++ + L RE + + + R D E+ E Sbjct: 13 AQRLDELNFLLSREDIMGDMKQFLALSREHNEVTAIAGRYAQYRQRETDLSSAREMLAEP 72 Query: 80 DDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANM 136 D I QE T+ ++LE E ++ LL + D + +A+LE+ AG GG ES +A Sbjct: 73 DMTDIAQEEITAAMADLVRLEDELQRL--LLPKDPDDARNAFLEIRAGTGGDESALFAAD 130 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA--------YGWLKGEQGVH 188 LLRMYTR+A++R +KTE + E G K L I G NA YG L+ E G H Sbjct: 131 LLRMYTRYADQRGWKTEIMSESPSELGGYKEVVLRIDGGNAESPSGLGVYGELRFESGGH 190 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P D+ ++I+ ++ RIDT+RASGAGGQH+N TDS Sbjct: 191 RVQRVPATETQGRIHTSACTVAVLPEPDEQEAVQINPAELRIDTFRASGAGGQHINKTDS 250 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+V +CQ +RSQH+NKA+A +L A++ E E + E A + + IG Sbjct: 251 AVRITHLPTGIVAECQDDRSQHRNKAKALQVLAARIQEKE--RSERAAKDAATRRGLIGS 308 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P + D R N+ S V++G LDD ++A Sbjct: 309 GDRSDRIRTYNF-PQGRLTDHRINLTLYKLSQVMEGALDDVVQA 351 >gi|316984833|gb|EFV63790.1| peptide chain release factor 1 [Neisseria meningitidis H44/76] gi|325140851|gb|EGC63361.1| peptide chain release factor 1 [Neisseria meningitidis CU385] gi|325144920|gb|EGC67204.1| peptide chain release factor 1 [Neisseria meningitidis M01-240013] Length = 385 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 127 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 186 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 187 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 246 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 247 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 306 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 307 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 363 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 364 LEEITNALIA 373 >gi|51473710|ref|YP_067467.1| peptide chain release factor 1 [Rickettsia typhi str. Wilmington] gi|61214605|sp|Q68WK7|RF1_RICTY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|51460022|gb|AAU03985.1| peptide chain release factor 1 (RF-1) [Rickettsia typhi str. Wilmington] Length = 355 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/289 (41%), Positives = 178/289 (61%), Gaps = 9/289 (3%) Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGG 127 N + LE+AL+ ++ L+ + ++E SLL EADS A +EV AG+GG Sbjct: 61 NNLRLEVALDNATLEMINNEIYILENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L MY R+AE + ++ E L I + G K A+ IKG + + LK E GV Sbjct: 121 EEAALFAAVLFNMYQRYAEFKGWRFEILAISNTGIGGYKEASASIKGKDVFSKLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + ++I+I + D RIDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESQGRIHTSAATVAVLPEAE-GVDIKIEDKDLRIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+ V Q E+SQHKNKA+A +LRA+LYE + +++E+ +S + ++G Sbjct: 240 SAVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQ--ERSDSRRWQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352 G +IR+Y + V D R N+ +V+ G LD+F++A +A Sbjct: 298 SGDRSERIRTYNF-LHGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIA 345 >gi|325291372|ref|YP_004267553.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus glycolicus DSM 8271] gi|324966773|gb|ADY57552.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus glycolicus DSM 8271] Length = 356 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/297 (40%), Positives = 174/297 (58%), Gaps = 8/297 (2%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAY 118 KEI +L D LLE L+ + Q D LQ K E E K LL + D + Sbjct: 52 KEIFRQLKDAQALLEEELDSEMREFAQSEIDELQNRKEEYEEKLKILLLPKDPNDEKNVI 111 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AGAGG E+ +A L +MY+R+AE++ +KTE L + G K +++G AY Sbjct: 112 MEIRAGAGGEEAALFAGDLYKMYSRYAEEQGWKTEMLSASYTDIGGFKEIIFMVEGRGAY 171 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E GVHR+ RI +S R HTS +++ V P +D ++IEI+ ++ RID + +SG Sbjct: 172 SMLKYESGVHRVQRIPSTESGGRIHTSTATVAVLPEAED-VDIEINPNEIRIDIFCSSGP 230 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTT SAVR+THIPTG+VV CQ E+SQHKNK +A +LRA+L LE ++E + I Sbjct: 231 GGQSVNTTQSAVRVTHIPTGIVVSCQDEKSQHKNKDKALKVLRARL--LEKAQQEAMGEI 288 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + K+++G G +IR+Y P V D R + ++L GD+ + + A +A Sbjct: 289 AQERKSQVGTGDRSERIRTYNF-PQGRVSDHRIGLTLHKLENILLGDIQEIIDALIA 344 >gi|306842976|ref|ZP_07475610.1| peptide chain release factor 1 [Brucella sp. BO2] gi|306286904|gb|EFM58429.1| peptide chain release factor 1 [Brucella sp. BO2] Length = 315 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 105/244 (43%), Positives = 154/244 (63%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + +G+ G K Sbjct: 63 ADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIAT 122 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ ++ R HTS +++ V P +D I+IEI D RID Sbjct: 123 VSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-IDIEIRNEDIRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK Sbjct: 182 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 240 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E + ++ ++++G G +IR+Y P V D R N+ V++GDLD+ + Sbjct: 241 AE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVD 297 Query: 349 ATLA 352 A ++ Sbjct: 298 ALIS 301 >gi|256112206|ref|ZP_05453127.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str. Ether] Length = 359 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 35 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 92 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++G+LD+ + A ++ Sbjct: 327 KLDRVMEGELDELVDALIS 345 >gi|240950074|ref|ZP_04754376.1| peptide chain release factor 1 [Actinobacillus minor NM305] gi|240295449|gb|EER46204.1| peptide chain release factor 1 [Actinobacillus minor NM305] Length = 360 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAY---LEVHAGAGGTESQDWAN 135 DD + ++ ++ K E+E +Q +L D ND Y LE+ AG GG E+ +A Sbjct: 70 DDPDMKDMAAEEIEENKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE ++++ E L ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 130 DLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKNKA+A +L +++ ++E +K+ + ++ + +G G +I Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQ--EQADTRRNLLGSGDRSDKI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++G +D+ ++ + Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|161511164|ref|NP_539109.2| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M] gi|225853308|ref|YP_002733541.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457] gi|260562790|ref|ZP_05833276.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M] gi|20139330|sp|Q8YJ95|RF1_BRUME RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790867|sp|C0RFB5|RF1_BRUMB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225641673|gb|ACO01587.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457] gi|260152806|gb|EEW87898.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M] Length = 359 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 35 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 91 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 92 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 152 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 212 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 270 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 326 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++G+LD+ + A ++ Sbjct: 327 KLDRVMEGELDELVDALIS 345 >gi|254362308|ref|ZP_04978420.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213] gi|153093888|gb|EDN74816.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213] Length = 360 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/279 (39%), Positives = 169/279 (60%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135 DD + ++ + K E+E +Q +L D ND A+LE+ AG GG E+ +A Sbjct: 70 DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITHI Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKNKA+A +L +++ ++E ++ + A ++ + +G G +I Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++G +D+ ++ + Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|134093473|ref|YP_001098548.1| peptide chain release factor 1 [Herminiimonas arsenicoxydans] Length = 356 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 149/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMYTR+AE+ +++ E + E G K + I Sbjct: 103 DERNIFLEIRAGTGGDESALFAGDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRI 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ ++ I+ +D RIDT Sbjct: 163 VGNGAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ +RSQHKNKA A +L A++ +++L R Sbjct: 223 YRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--R 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + + K+ IG G +IR+Y P + D R N+ ++DGDL + A Sbjct: 281 EQQSQEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNA 339 Query: 350 TLA 352 A Sbjct: 340 LAA 342 >gi|261493250|ref|ZP_05989777.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496507|ref|ZP_05992887.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307710|gb|EEY09033.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311100|gb|EEY12276.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 360 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/279 (39%), Positives = 169/279 (60%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135 DD + ++ + K E+E +Q +L D ND A+LE+ AG GG E+ +A Sbjct: 70 DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITHI Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKNKA+A +L +++ ++E ++ + A ++ + +G G +I Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++G +D+ ++ + Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|161621297|ref|YP_585342.2| peptide chain release factor 1 [Cupriavidus metallidurans CH34] gi|119361586|sp|Q1LIF3|RF1_RALME RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 360 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 117/292 (40%), Positives = 169/292 (57%), Gaps = 18/292 (6%) Query: 66 LCDNLILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D+ + E A +E D + LQ ++LQ + L + +LL LE+ A Sbjct: 68 LLDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLL----------LEIRA 117 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG ES +A LLRMYTR+AE+R+++ E + + G K + I G A+ LK Sbjct: 118 GTGGEESALFAADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKF 177 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ V P D+ E+EI+ SD R+DT+RASGAGGQHV Sbjct: 178 ESGGHRVQRVPATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHV 237 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A +L A++ +++L R A + + Sbjct: 238 NKTDSAVRLTHLPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQL--RAAQAKEANTRR 295 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IG G +IR+Y P V D R N+ ++DGDLD+ + A A Sbjct: 296 NLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLDELISALSA 346 >gi|332342793|gb|AEE56127.1| peptide chain release factor protein PrfA [Escherichia coli UMNK88] Length = 360 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIKPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|296101959|ref|YP_003612105.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056418|gb|ADF61156.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 360 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/272 (40%), Positives = 163/272 (59%), Gaps = 10/272 (3%) Query: 80 DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 DD + + + LQ K E +Q + LL D +A++EV AG GG E+ +A Sbjct: 70 DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE R+++ E + ++GE G K I G YG LK E G HR+ R+ Sbjct: 130 DLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVPA 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+ Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI--- 312 PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRN 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 R+Y P V D R N+ +V++G LD Sbjct: 308 RTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|331018122|gb|EGH98178.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 360 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 122/314 (38%), Positives = 184/314 (58%), Gaps = 22/314 (7%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K L R + L+ A + +K+ + + E+A+EE ++ET L ++LE + + Sbjct: 53 KQLARVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQ 99 Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 100 RM--LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGE 157 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P D+ I Sbjct: 158 HGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAI 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A + L Sbjct: 218 EINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLS 277 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 AKL + Q + I K +G G +IR+Y P V D R N+ S +V Sbjct: 278 AKLN--DQQTSAAASAIASERKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLDEV 334 Query: 339 LDGDLDDFMKATLA 352 L G +D ++ LA Sbjct: 335 LAGGVDAVIEPLLA 348 >gi|190151400|ref|YP_001969925.1| peptide chain release factor 1 (RF-1) [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250479|ref|ZP_07336676.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251821|ref|ZP_07337992.1| Peptide chain release factor 1 (RF-1) [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249121|ref|ZP_07531128.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251520|ref|ZP_07533427.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256019|ref|ZP_07537807.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307262579|ref|ZP_07544210.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692365|sp|B3GZJ0|RF1_ACTP7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189916531|gb|ACE62783.1| Peptide chain release factor 1 (RF-1) [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649251|gb|EFL79436.1| Peptide chain release factor 1 (RF-1) [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650467|gb|EFL80626.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854409|gb|EFM86605.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860984|gb|EFM92990.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865441|gb|EFM97336.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306872077|gb|EFN03790.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 360 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/279 (39%), Positives = 170/279 (60%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135 DD + + ++ + K E+E +Q +L D ND A+LE+ AG GG E+ +A Sbjct: 70 DDPDMKEMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKNKA+A +L +++ ++E ++ + A ++ + +G G +I Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++G +D+ ++ + Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|265999301|ref|ZP_05465736.2| peptide chain release factor 1 [Brucella melitensis bv. 2 str. 63/9] gi|17982074|gb|AAL51373.1| bacterial peptide chain release factor 1 (rf-1) [Brucella melitensis bv. 1 str. 16M] gi|263093126|gb|EEZ17261.1| peptide chain release factor 1 [Brucella melitensis bv. 2 str. 63/9] gi|326409872|gb|ADZ66937.1| peptide chain release factor 1 [Brucella melitensis M28] gi|326539585|gb|ADZ87800.1| peptide chain release factor 1 [Brucella melitensis M5-90] Length = 377 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 53 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 109 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 169 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 344 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++G+LD+ + A ++ Sbjct: 345 KLDRVMEGELDELVDALIS 363 >gi|193222210|emb|CAL60419.2| Peptide chain release factor 1 (RF-1) [Herminiimonas arsenicoxydans] Length = 361 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 149/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMYTR+AE+ +++ E + E G K + I Sbjct: 108 DERNIFLEIRAGTGGDESALFAGDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ ++ I+ +D RIDT Sbjct: 168 VGNGAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ +RSQHKNKA A +L A++ +++L R Sbjct: 228 YRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--R 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + + K+ IG G +IR+Y P + D R N+ ++DGDL + A Sbjct: 286 EQQSQEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNA 344 Query: 350 TLA 352 A Sbjct: 345 LAA 347 >gi|165977491|ref|YP_001653084.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877592|gb|ABY70640.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 333 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/279 (39%), Positives = 170/279 (60%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135 DD + + ++ + K E+E +Q +L D ND A+LE+ AG GG E+ +A Sbjct: 43 DDPDMKEMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 102 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 103 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 162 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI Sbjct: 163 TESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHI 222 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKNKA+A +L +++ ++E ++ + A ++ + +G G +I Sbjct: 223 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 280 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++G +D+ ++ + Sbjct: 281 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 318 >gi|148826783|ref|YP_001291536.1| peptide chain release factor 1 [Haemophilus influenzae PittGG] gi|148718025|gb|ABQ99152.1| peptide chain release factor 1 [Haemophilus influenzae PittGG] Length = 361 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 344 Query: 350 TL 351 + Sbjct: 345 II 346 >gi|90581727|ref|ZP_01237514.1| peptide chain release factor 1 [Vibrio angustum S14] gi|90437081|gb|EAS62285.1| peptide chain release factor 1 [Vibrio angustum S14] Length = 362 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 171/291 (58%), Gaps = 10/291 (3%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHA 123 ++L+ E +EDD + + + ++ K E+E E +L D ND ++E+ A Sbjct: 60 EDLVAAEEMAQEDDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRA 119 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG E+ +A L RMY+++AE R ++ E + + E+ G K + G YG LK Sbjct: 120 GAGGDEAGIFAGDLFRMYSKYAESRGWRIEIINENRSEQGGYKEMIAKVNGDGVYGILKF 179 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ V P + ++ EI+ D +IDT+RASGAGGQHV Sbjct: 180 ESGGHRVQRVPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLKIDTFRASGAGGQHV 239 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR A + + Sbjct: 240 NTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRH--AEEASTRR 297 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R + ++V++GDLD ++ Sbjct: 298 NLLGSGDRSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQPVF 347 >gi|294787740|ref|ZP_06752984.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453] gi|294484033|gb|EFG31716.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453] Length = 358 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/272 (41%), Positives = 165/272 (60%), Gaps = 10/272 (3%) Query: 88 TSDNLQRIKLEVEYKQFES---LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTR 143 ++ ++ K ++E FE LL +AD + + ++E+ AG GG E+ +A LLRMY+R Sbjct: 78 AAEEIEHAKTQIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSR 137 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE+ +++TE + + + G K + + G AY LK E G HR+ R+ +S R H Sbjct: 138 FAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGHRVQRVPTTESQGRIH 197 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS ++ V P D+ EI+++ +D RIDT+RASGAGGQH+N TDSA+RITH+PTG+VV+C Sbjct: 198 TSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDSAIRITHLPTGMVVEC 257 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q RSQH NKAQA +L A+L + QKRE A K+ IG G +IR+Y P Sbjct: 258 QDGRSQHANKAQAMKVLAARLN--DKQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQ 314 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R N+ V+DGD+++ A +A Sbjct: 315 GRVTDHRINLTLHKLDFVMDGDMEEITSALIA 346 >gi|88192214|pdb|2B3T|B Chain B, Molecular Basis For Bacterial Class 1 Release Factor Methylation By Prmc Length = 360 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +++ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|170768314|ref|ZP_02902767.1| peptide chain release factor 1 [Escherichia albertii TW07627] gi|170123080|gb|EDS92011.1| peptide chain release factor 1 [Escherichia albertii TW07627] Length = 360 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D DA+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERDAFLEVRAGTGGDEAALFAGDLFRMYSRYAETRRWQVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|169832291|ref|YP_001718273.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator MP104C] gi|238688348|sp|B1I6L2|RF1_DESAP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169639135|gb|ACA60641.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator MP104C] Length = 355 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/306 (39%), Positives = 181/306 (59%), Gaps = 26/306 (8%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 +D+A ++E QD L ELA E + +L+E SD E ++ +L Sbjct: 58 MDDARQMLREEQD-----AELRELA--ESEVEVLRERSD---------ELRRRLRVLLLP 101 Query: 112 ADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 D ND +E+ AG GG E+ +A LLRMY R+AE+R ++ E L +++ + GIK A Sbjct: 102 KDPNDEKNVIIEIRAGTGGEEAALFAGDLLRMYLRYAERRGWRAEMLNVNETDLGGIKEA 161 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 +L++G AY LK E GVHR+ R+ +S R HTS +++ V P ++ +++EI D Sbjct: 162 IVLLEGRGAYSELKFESGVHRVQRVPATESGGRIHTSAATVAVLPEAEE-VDVEIRPEDL 220 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RID + ++G GGQ VNTT SAVR+TH+P+G+VV CQ E+SQHKN+ +A +LRA+L + Sbjct: 221 RIDVFCSTGPGGQSVNTTQSAVRVTHLPSGIVVSCQDEKSQHKNRDKAMKVLRARLLDKA 280 Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 Q+++E I S KT++G G +IR+Y P V D R N+ +VL GDL + Sbjct: 281 QQEQQE--RIASSRKTQVGTGDRSERIRTYNF-PQNRVTDHRLNLTLYRLEEVLQGDLHE 337 Query: 346 FMKATL 351 F+ A + Sbjct: 338 FVSALI 343 >gi|324113971|gb|EGC07945.1| peptide chain release [Escherichia fergusonii B253] Length = 360 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEGRRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|238755548|ref|ZP_04616886.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473] gi|238706228|gb|EEP98607.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473] Length = 360 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 104/237 (43%), Positives = 147/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LE+ AG GG E+ +A + RMY+R+AE R++K E + DGE G K + Sbjct: 107 DERGCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEVMSASDGEHGGYKEIIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGEGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAEMPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + E+S+ +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 Q----LAEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|227873770|ref|ZP_03991999.1| peptide chain release factor RF1 [Oribacterium sinus F0268] gi|227840386|gb|EEJ50787.1| peptide chain release factor RF1 [Oribacterium sinus F0268] Length = 358 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/276 (40%), Positives = 170/276 (61%), Gaps = 15/276 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +LE+A EE LQ+ ++ +R+ E+ Q L E D + +E+ GAGG E+ Sbjct: 73 ILEMAKEE-----LQQAKEDQERLTKEI---QLLLLPKDENDDKNIVMEIRGGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT +AEKR +KTE + ++ G+K ++ G AY LK E GVHR+ Sbjct: 125 LFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVDGHGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P V+D +++EI+ +D R++ +R+SGAGGQH+N T SAVR Sbjct: 185 RVPETESGGRIHTSTATVAVMPEVED-VQVEINPADVRMEVFRSSGAGGQHINKTSSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 + H PTG+V +CQ+ERSQ +N+ +A +LRA+LYE+EL+K++ N E ++++G G Sbjct: 244 LIHEPTGLVAECQEERSQVQNREKAMRLLRARLYEIELEKQQS-ENAAE-KRSQLGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +IR+Y P V D R + + VL GDLD Sbjct: 302 SEKIRTYNF-PQGRVTDHRIKLTLYNIDAVLSGDLD 336 >gi|297517277|ref|ZP_06935663.1| peptide chain release factor 1 [Escherichia coli OP50] Length = 274 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 21 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 80 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 81 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 140 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 141 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 200 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 201 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 252 >gi|145632952|ref|ZP_01788685.1| peptide chain release factor 1 [Haemophilus influenzae 3655] gi|144986608|gb|EDJ93174.1| peptide chain release factor 1 [Haemophilus influenzae 3655] Length = 361 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 344 Query: 350 TL 351 + Sbjct: 345 II 346 >gi|265993634|ref|ZP_06106191.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str. Ether] gi|262764615|gb|EEZ10536.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str. Ether] Length = 372 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/319 (37%), Positives = 182/319 (57%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 48 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 104 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 105 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVS 164 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 165 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 224 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 225 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 282 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 283 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 339 Query: 334 SPSDVLDGDLDDFMKATLA 352 V++G+LD+ + A ++ Sbjct: 340 KLDRVMEGELDELVDALIS 358 >gi|225374519|ref|ZP_03751740.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM 16841] gi|225213757|gb|EEG96111.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM 16841] Length = 358 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 126/348 (36%), Positives = 199/348 (57%), Gaps = 12/348 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD ++ + R L ++ +P + N + LM+E+ + + KE + + D Sbjct: 1 MFDKLEDLLIRYEELMSELSEPDVANNPERFRKLMKEQSDILPIVEAYKEYKQCKQNIED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 +L +LE +E+ + +E ++ + E+E + LL + D + +E+ AGAGG Sbjct: 61 SLAMLEEESDEEMRELAKEELNDAKNRVAELENELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE + +KTE +E D G+KS T +I G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYQHYAETKNWKTEIMECDDTGIGGMKSVTFMITGAGAYSVMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P +D ++++I E D RID RASGAGGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEAED-VDVQIDEKDIRIDVCRASGAGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR KL++LE QK + E K++IG Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLFDLEQQKAHDAE--AELRKSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R N+ +++GD+ + + A +A Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIA 344 >gi|319779045|ref|YP_004129958.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9] gi|317109069|gb|ADU91815.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9] Length = 355 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 117/336 (34%), Positives = 186/336 (55%), Gaps = 7/336 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QRL ++ +P + ++ + L RER +D + KE + D +E+ + D Sbjct: 10 QRLIEVDALLAEPDVADDMDRFRKLSRERSEIDPVVELFKEFEAAEGDLNTAVEMMSDPD 69 Query: 81 DCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + +E +RI+ + Q E L D +LE+ AG GG ES + L R Sbjct: 70 LKEMGEEEMKSTKERIEQLEQKLQLELLPKDPDDGRSVFLEIRAGTGGDESAIFTGDLFR 129 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+R+AE++ +K E + + E G + I+G YG LK E G HR+ R+ +S Sbjct: 130 MYSRYAEQKGWKVELMSENPSELGGYREVIARIEGDGVYGQLKYESGAHRVQRVPETESQ 189 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V P D+ E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+ Sbjct: 190 GRVHTSACTVAVLPEADELAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITHLPTGI 249 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 V +CQ +RSQHKNKA+A ++L A++ +++++E+ + K+ +G G +IR+Y Sbjct: 250 VAECQDDRSQHKNKARAMSVLAARIN--DIKRQEQQSKEAAERKSLVGSGDRSERIRTYN 307 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R N+ +++G LD+ A ++ Sbjct: 308 Y-PQGRVTDHRINLTLYKLQQIMEGSLDELTNALIS 342 >gi|28897517|ref|NP_797122.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD 2210633] gi|153840439|ref|ZP_01993106.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810] gi|260364112|ref|ZP_05776832.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030] gi|260897557|ref|ZP_05906053.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466] gi|260903527|ref|ZP_05911922.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037] gi|31076863|sp|Q87RN4|RF1_VIBPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|28805729|dbj|BAC59006.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD 2210633] gi|149745897|gb|EDM57027.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810] gi|308086350|gb|EFO36045.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466] gi|308110855|gb|EFO48395.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037] gi|308114221|gb|EFO51761.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030] Length = 362 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 11/323 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + D+L E +EDD + + + Sbjct: 25 DPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQDDLAAAEEMAKEDDEEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+++AEK Sbjct: 84 IKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A +L A++ + E ++R A + ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFM 347 D R N+ ++V++GDL + Sbjct: 321 DHRINLTIYRLNEVMEGDLQSLI 343 >gi|257464821|ref|ZP_05629192.1| peptide chain release factor 1 [Actinobacillus minor 202] gi|257450481|gb|EEV24524.1| peptide chain release factor 1 [Actinobacillus minor 202] Length = 360 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAY---LEVHAGAGGTESQDWAN 135 DD + ++ ++ K E+E +Q +L D ND Y LE+ AG GG E+ +A Sbjct: 70 DDPDMKDMAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE ++++ E L ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 130 DLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKNKA+A +L +++ ++E +K+ + ++ + +G G +I Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQ--EQADTRRNLLGSGDRSDKI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++G +D+ ++ + Sbjct: 308 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|145634872|ref|ZP_01790579.1| peptide chain release factor 1 [Haemophilus influenzae PittAA] gi|145267738|gb|EDK07735.1| peptide chain release factor 1 [Haemophilus influenzae PittAA] Length = 361 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVINGKIDELIQP 344 Query: 350 TL 351 + Sbjct: 345 II 346 >gi|16273461|ref|NP_439710.1| peptide chain release factor 1 [Haemophilus influenzae Rd KW20] gi|145631803|ref|ZP_01787563.1| peptide chain release factor 1 [Haemophilus influenzae R3021] gi|145637543|ref|ZP_01793200.1| peptide chain release factor 1 [Haemophilus influenzae PittHH] gi|145642039|ref|ZP_01797610.1| peptide chain release factor 1 [Haemophilus influenzae R3021] gi|148826083|ref|YP_001290836.1| peptide chain release factor 1 [Haemophilus influenzae PittEE] gi|229844233|ref|ZP_04464374.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1] gi|229847123|ref|ZP_04467228.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1] gi|260580342|ref|ZP_05848171.1| peptide chain release factor 1 [Haemophilus influenzae RdAW] gi|260583304|ref|ZP_05851079.1| peptide chain release factor 1 [Haemophilus influenzae NT127] gi|319897179|ref|YP_004135374.1| peptide chain release factor rf-1 [Haemophilus influenzae F3031] gi|1574404|gb|AAC23209.1| peptide chain release factor 1 (prfA) [Haemophilus influenzae Rd KW20] gi|144982593|gb|EDJ90143.1| peptide chain release factor 1 [Haemophilus influenzae R3021] gi|145269229|gb|EDK09175.1| peptide chain release factor 1 [Haemophilus influenzae PittHH] gi|145273219|gb|EDK13094.1| peptide chain release factor 1 [Haemophilus influenzae 22.4-21] gi|148716243|gb|ABQ98453.1| peptide chain release factor 1 [Haemophilus influenzae PittEE] gi|229809952|gb|EEP45673.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1] gi|229813227|gb|EEP48915.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1] gi|260093019|gb|EEW76953.1| peptide chain release factor 1 [Haemophilus influenzae RdAW] gi|260093664|gb|EEW77577.1| peptide chain release factor 1 [Haemophilus influenzae NT127] gi|301170298|emb|CBW29904.1| peptide chain release factor RF-1 [Haemophilus influenzae 10810] gi|317432683|emb|CBY81046.1| peptide chain release factor RF-1 [Haemophilus influenzae F3031] Length = 361 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 168 TGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 344 Query: 350 TL 351 + Sbjct: 345 II 346 >gi|296313476|ref|ZP_06863417.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768] gi|296839995|gb|EFH23933.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768] Length = 358 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|238022362|ref|ZP_04602788.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147] gi|237866976|gb|EEP68018.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147] Length = 358 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AG GG E+ +A LLRMYTR+AE+ +++TE + + + G K + + Sbjct: 107 DDKNIFIEIRAGTGGDEAALFAGDLLRMYTRYAERNRWQTEIVSASESDLGGYKEVIVRL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE+++ D RIDT Sbjct: 167 VGLGAYSKLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NK +A +L A+L ++QKR Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLN--DIQKR 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A K+ IG G +IR+Y P V D R N+ V+DGD+D+ A Sbjct: 285 EAHAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMDEITSA 343 Query: 350 TLA 352 +A Sbjct: 344 LIA 346 >gi|152989856|ref|YP_001355578.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2] gi|166223578|sp|A6Q162|RF1_NITSB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151421717|dbj|BAF69221.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2] Length = 354 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 120/340 (35%), Positives = 193/340 (56%), Gaps = 14/340 (4%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELA 76 +QR + +N P + Q++ + L +E+ ++ + KE I + + +N L+E Sbjct: 10 IQRYNEINELLSSPEITQDIKKMTALSKEQSEIEPIVEKAKEYMNILEAIEENRSLIE-- 67 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135 +E+ + +E L+ K ++E + L+S + D D YLE+ AG GG E+ +A+ Sbjct: 68 -DEELGELAKEELKELEPKKEQLEEEIKVLLISKDPNDEKDIYLEIRAGTGGEEAALFAS 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L + Y R+AEK+ ++ E + + + G K IKG Y LK E G HR+ R+ Sbjct: 127 DLFKAYARYAEKKGWRVEIVSSSESDSGGYKEIIAKIKGQGVYSRLKYEAGTHRVQRVPE 186 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ + P VDD +++EI+ +D +ID YR+SG GGQ VNTTDSAVRITHI Sbjct: 187 TESQGRIHTSAVTVAIMPEVDD-VDVEINPNDLKIDVYRSSGHGGQSVNTTDSAVRITHI 245 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV Q E+SQHKNK +A +L+A+++E + RE+ + + K ++G G +I Sbjct: 246 PTGIVVAMQDEKSQHKNKEKALKILKARIFEKRM--REQQEALAKDRKEQVGSGDRSERI 303 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+Y P V D R + +V+ GDLD ++ +A Sbjct: 304 RTYNF-PQNRVTDHRIGLTLYKLEEVMQGDLDQIIEPLIA 342 >gi|1526559|dbj|BAA08795.1| peptide termination factor [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 370 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 125/345 (36%), Positives = 191/345 (55%), Gaps = 25/345 (7%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELAL 77 +RL + ED ++ +++ + L +E+ +L+ + F+ K+ D + D +LE Sbjct: 14 KRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAILE--- 70 Query: 78 EEDDCSILQ-------ETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTE 129 E D +++ E +D ++ ++ +E E LL + D + +E+ AGG E Sbjct: 71 NEKDSELIELAKIELDENNDKVEHLQQVIE----EMLLPKDPNDEKNVIIEIRGAAGGDE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY +AE + +K LE GE G +IKG Y LK E G HR Sbjct: 127 ANIFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R TS +++ V P + + +EIEI +D RIDTYRASGAGGQHVNTTDSA Sbjct: 187 VQRVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSA 245 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV Q RSQH NK A MLRAK+YE E++K++ A + K +G G Sbjct: 246 VRITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQ--AQADATRKNAVGTG 303 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + R+Y P V D R + V++G++D+F+ A + Sbjct: 304 ARSEKFRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALI 347 >gi|241760302|ref|ZP_04758397.1| peptide chain release factor 1 [Neisseria flavescens SK114] gi|241319180|gb|EER55658.1| peptide chain release factor 1 [Neisseria flavescens SK114] Length = 358 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 154/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ ++ R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATENQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|56416889|ref|YP_153963.1| peptide chain release factor 1 [Anaplasma marginale str. St. Maries] gi|222475254|ref|YP_002563670.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str. Florida] gi|255003238|ref|ZP_05278202.1| peptide chain release factor 1 [Anaplasma marginale str. Puerto Rico] gi|255004365|ref|ZP_05279166.1| peptide chain release factor 1 [Anaplasma marginale str. Virginia] gi|81599140|sp|Q5PAH2|RF1_ANAMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790858|sp|B9KIV2|RF1_ANAMF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56388121|gb|AAV86708.1| peptide chain release factor 1 [Anaplasma marginale str. St. Maries] gi|222419391|gb|ACM49414.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str. Florida] Length = 359 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 113/255 (44%), Positives = 160/255 (62%), Gaps = 10/255 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L + DS A LE+ AG GG E+ + L RMY ++AE++ +K E + I Sbjct: 98 QLSLLPKDKDDSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGI 157 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K A+L I G + + LK E GVHR+ R+ +S+ R HTS +++ V P V++ ++++ Sbjct: 158 GGYKEASLCIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEE-VDLK 216 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I E D RID YR+SG GGQ VNTTDSAVRITHIPTG+VV Q E+SQHKNK++A +LRA Sbjct: 217 IDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRA 276 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSY-VLQPYQMVKDLRTNIEKTSPSDV 338 +LY LE QK E+ I + K++IG G +IR+Y LQ + D R N+ + Sbjct: 277 RLYNLEKQKIED--EISKMRKSQIGSGDRSERIRTYNFLQ--SRITDHRINMTLYRLEHI 332 Query: 339 L-DGDLDDFMKATLA 352 + +GDLD+F+ A +A Sbjct: 333 MKEGDLDEFVDALIA 347 >gi|261399946|ref|ZP_05986071.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970] gi|269210396|gb|EEZ76851.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970] Length = 358 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|13472970|ref|NP_104537.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099] gi|20139342|sp|Q98G93|RF1_RHILO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|14023718|dbj|BAB50323.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099] Length = 359 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 116/282 (41%), Positives = 167/282 (59%), Gaps = 18/282 (6%) Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133 AL E D ++E + LQ K + LL AD +A LE+ AG GG E+ + Sbjct: 77 ALAEADLPDVEERIEALQ--------KDIQILLLPKDAADDKNAILEIRAGTGGDEAALF 128 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMY R+A +R ++ E + DG+ G K + G + LK E GVHR+ R+ Sbjct: 129 AGDLFRMYERYAAERGWRFETVSASDGDAGGFKEIIATVSGKGVFAHLKFESGVHRVQRV 188 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +++ R HTS +++ V P ++ ++IEI D RIDT RASG+GGQHVNTTDSAVRIT Sbjct: 189 PATEASGRIHTSAATVAVLPEAEE-VDIEIRAEDIRIDTMRASGSGGQHVNTTDSAVRIT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG++V Q E+SQH+N+A+A +LRA+LY+LE K +E ES K+++G G Sbjct: 248 HLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERSKADE--ERSESRKSQVGSGDRSE 304 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ V+ G+LD+ + A +A Sbjct: 305 RIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEIVDALIA 345 >gi|328473485|gb|EGF44333.1| peptide chain release factor 1 [Vibrio parahaemolyticus 10329] Length = 362 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 11/323 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + D+L E +EDD + + + Sbjct: 25 DPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQDDLAAAEEMAKEDDEEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+++AEK Sbjct: 84 IKDAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A +L A++ + E ++R A + ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFM 347 D R N+ ++V++GDL + Sbjct: 321 DHRINLTIYRLNEVMEGDLQSLI 343 >gi|307244800|ref|ZP_07526899.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253754|ref|ZP_07535608.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258211|ref|ZP_07539954.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854245|gb|EFM86451.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863238|gb|EFM95178.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867671|gb|EFM99516.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 360 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 122/352 (34%), Positives = 199/352 (56%), Gaps = 26/352 (7%) Query: 17 DNAVQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRL 66 D+ + +L L+ + E DP + + + + +E L+ ++ K++ + + Sbjct: 3 DSIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDI 62 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVH 122 + ILL DD + ++ + K E+E +Q +L D ND A+LE+ Sbjct: 63 EEAQILL------DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIR 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GG E+ +A L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLK 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQH Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQH 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A +L +++ ++E ++ + A ++ Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTR 294 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +G G +IR+Y P V D R N+ +V++G +D+ ++ + Sbjct: 295 RNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|89094907|ref|ZP_01167839.1| peptide chain release factor 1 [Oceanospirillum sp. MED92] gi|89080864|gb|EAR60104.1| peptide chain release factor 1 [Oceanospirillum sp. MED92] Length = 362 Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 104/234 (44%), Positives = 150/234 (64%), Gaps = 6/234 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +LEV AG GG E+ +A L RMY+R+AE + ++ E + ++GE G K I Sbjct: 109 DSRNVFLEVRAGTGGDEAAIFAGDLFRMYSRYAEVQGWRVEVVSANEGEHGGYKEIISRI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y LK E G HR+ R+ +S R HTS ++ + +D+S EIEI+++D RIDT Sbjct: 169 VGTNVYSQLKFESGAHRVQRVPETESQGRIHTSACTVAIMAEMDESAEIEINKADLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITHIPTGVVV+CQ+ERSQHKN+A+A ++L ++L ++ Sbjct: 229 FRASGAGGQHVNKTDSAIRITHIPTGVVVECQEERSQHKNRAKAMSLLASRL--QAAEEE 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 + A + + K+ +G G +IR+Y P V D R N+ +V+ G+L Sbjct: 287 RQAAELASTRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKLQEVISGEL 339 >gi|315634081|ref|ZP_07889370.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC 33393] gi|315477331|gb|EFU68074.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC 33393] Length = 360 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 117/290 (40%), Positives = 172/290 (59%), Gaps = 10/290 (3%) Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAG 124 N L E L DD + + ++ K E+E +Q +L D ND YLE+ AG Sbjct: 59 NANLEEAQLLLDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAG 118 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K L+ G AYG LK E Sbjct: 119 TGGDEAGIFAGDLFRMYSRYAETKRWRIEVLSENESEQGGFKEIIALVSGDGAYGQLKFE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS ++ V P + +S EI+ SD RIDTYRASGAGGQH+N Sbjct: 179 SGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQHIN 238 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L ++ ++ + ++ + Sbjct: 239 KTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRL--VQQEQEKLEQEQADTRRN 296 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R N+ +V++G +DD ++ + Sbjct: 297 LLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPII 345 >gi|254995073|ref|ZP_05277263.1| peptide chain release factor 1 [Anaplasma marginale str. Mississippi] Length = 359 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/245 (45%), Positives = 157/245 (64%), Gaps = 10/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS A LE+ AG GG E+ + L RMY ++AE++ +K E + I G K A+L I Sbjct: 108 DSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + + LK E GVHR+ R+ +S+ R HTS +++ V P V++ ++++I E D RID Sbjct: 168 GGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEE-VDLKIDEKDLRIDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVRITHIPTG+VV Q E+SQHKNK++A +LRA+LY LE QK Sbjct: 227 YRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKI 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSY-VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347 E+ I + K++IG G +IR+Y LQ + D R N+ ++ +GDLD+F+ Sbjct: 287 ED--EISKMRKSQIGSGDRSERIRTYNFLQ--SRITDHRINMTLYRLEHIMKEGDLDEFV 342 Query: 348 KATLA 352 A +A Sbjct: 343 DALIA 347 >gi|61252075|sp|P43917|RF1_HAEIN RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 360 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + Sbjct: 107 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 167 TGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ Sbjct: 227 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 286 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|32033818|ref|ZP_00134103.1| COG0216: Protein chain release factor A [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249197|ref|ZP_07531194.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307260449|ref|ZP_07542144.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306858721|gb|EFM90780.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306869852|gb|EFN01634.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 360 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 122/352 (34%), Positives = 199/352 (56%), Gaps = 26/352 (7%) Query: 17 DNAVQRLSFLNTKTE-------DPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRL 66 D+ + +L L+ + E DP + + + + +E L+ ++ K++ + + Sbjct: 3 DSIINKLESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDI 62 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVH 122 + ILL DD + ++ + K E+E +Q +L D ND A+LE+ Sbjct: 63 EEAQILL------DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIR 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GG E+ +A L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK Sbjct: 117 AGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLK 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQH Sbjct: 177 FESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQH 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A +L +++ ++E ++ + A ++ Sbjct: 237 VNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTR 294 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +G G +IR+Y P V D R N+ +V++G +D+ ++ + Sbjct: 295 RNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|269958696|ref|YP_003328483.1| peptide chain release factor 1 [Anaplasma centrale str. Israel] gi|269848525|gb|ACZ49169.1| peptide chain release factor 1 [Anaplasma centrale str. Israel] Length = 359 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/245 (45%), Positives = 157/245 (64%), Gaps = 10/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS A LE+ AG GG E+ + L RMY ++AE++ +K E + I G K A+L I Sbjct: 108 DSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + + LK E GVHR+ R+ +S+ R HTS +++ V P V++ ++++I E D RID Sbjct: 168 GGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEE-VDLKIDEKDLRIDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVRITHIPTG+VV Q E+SQHKNK++A +LRA+LY LE QK Sbjct: 227 YRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKI 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSY-VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347 E+ I + K++IG G +IR+Y LQ + D R N+ ++ +GDLD+F+ Sbjct: 287 ED--EISKMRKSQIGSGDRSERIRTYNFLQ--SRITDHRINMTLYRLEHIMKEGDLDEFV 342 Query: 348 KATLA 352 A +A Sbjct: 343 DALIA 347 >gi|308389808|gb|ADO32128.1| peptide chain release factor I [Neisseria meningitidis alpha710] gi|325130724|gb|EGC53462.1| peptide chain release factor 1 [Neisseria meningitidis OX99.30304] gi|325136665|gb|EGC59265.1| peptide chain release factor 1 [Neisseria meningitidis M0579] gi|325201657|gb|ADY97111.1| peptide chain release factor 1 [Neisseria meningitidis M01-240149] gi|325208608|gb|ADZ04060.1| peptide chain release factor 1 [Neisseria meningitidis NZ-05/33] Length = 358 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITNALIA 346 >gi|309973234|gb|ADO96435.1| Peptide chain release factor 1 [Haemophilus influenzae R2846] Length = 361 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 153/242 (63%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 168 TGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPKLPESEMPEINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ ++++G +D+ ++ Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEIMNGKIDELIQP 344 Query: 350 TL 351 + Sbjct: 345 II 346 >gi|83951817|ref|ZP_00960549.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM] gi|83836823|gb|EAP76120.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM] Length = 349 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 115/279 (41%), Positives = 162/279 (58%), Gaps = 18/279 (6%) Query: 81 DCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 D + + D L+ +K E+ + Q L EAD+ A +E+ G GG E+ +A Sbjct: 64 DPEMRELAEDELRTLKAELPGREKALQLALLPKDEADARPAIIEIRPGTGGEEAALFAGD 123 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R+AE R ++ E +E E GIK A + +KG + + LK E GVHR+ R+ Sbjct: 124 LLRMYARYAEARGWQFEVIEEAQTELGGIKEAVVHVKGAHVFARLKYESGVHRVQRVPET 183 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P +D ++I I SD RIDT RASGAGGQHVNTTDSAVRITHIP Sbjct: 184 ESGGRIHTSAATVAVLPEAED-VDIHIDPSDIRIDTMRASGAGGQHVNTTDSAVRITHIP 242 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK------REEIANIGESSKTEIGWGR 310 +G+VV E+SQH+N+ A +L+ +LY+LE QK + A +G ++E Sbjct: 243 SGIVV-TSSEKSQHRNREIAMQVLKTRLYDLERQKVHDARSADRAAQVGSGDRSE----- 296 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R N+ V+ GDLDD + A Sbjct: 297 RIRTYNF-PQGRMTDHRINLTLYKLDQVMAGDLDDIIDA 334 >gi|331703153|ref|YP_004399840.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801708|emb|CBW53861.1| Peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 364 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 122/332 (36%), Positives = 188/332 (56%), Gaps = 19/332 (5%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAI-SFI--KEIQDRLCDNLILLELALEEDDCSI--- 84 ED ++ +++ + L +E+ +L+ + F+ K+ + + D +LE +++ + Sbjct: 24 EDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAKAILENEKDQELIELAKI 83 Query: 85 -LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 L E +D ++ ++ +E E LL + D + +E+ AGG E+ +A LLRMY Sbjct: 84 ELDENNDKVEHLQQVIE----EMLLPKDPNDDKNVIVEIRGAAGGDEANIFAGDLLRMYK 139 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 +AE + +K LE GE G +IKG Y LK E G HR+ R+ ++ R Sbjct: 140 LYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQRVPKTEAKGRI 199 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TS +++ V P + + +EIEI +D RIDTYRASGAGGQHVNTTDSAVRITH+PTG+VV Sbjct: 200 QTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVRITHLPTGIVVT 258 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 Q RSQH NK A MLRAK+YE E++K++ A + K +G G +IR+Y P Sbjct: 259 SQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQ--AQADATRKNAVGTGARSEKIRTYNY-P 315 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V D R + V++G++D+F+ A + Sbjct: 316 QNRVTDHRVGLTLNKLDQVMEGNIDEFIIALI 347 >gi|315924395|ref|ZP_07920617.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus ATCC 23263] gi|315622274|gb|EFV02233.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus ATCC 23263] Length = 364 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 155/242 (64%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A L RMY+R+AE++ +K E L + + GIK I Sbjct: 115 DERNVIVEIRAGAGGDEAALFAGDLFRMYSRYAERQSWKIEILSSNILDLGGIKEINFAI 174 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS +++ V P DD +E++++ +D R+D Sbjct: 175 QGQGAYSRLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEADD-VEVDLNPNDIRVDV 233 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVR+THIP+G+VV CQ E+SQ KNKA+A +L+A+LY+LE+QK+ Sbjct: 234 YRSSGNGGQCVNTTDSAVRLTHIPSGLVVTCQDEKSQIKNKAKAMKVLKARLYDLEMQKQ 293 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + I E K+++G G +IR+Y P + D R LDG++D+ + A Sbjct: 294 Q--SAISEERKSQVGTGDRSERIRTYNF-PQGRITDHRIGQTVHQLEAFLDGEIDEMINA 350 Query: 350 TL 351 + Sbjct: 351 LI 352 >gi|319410939|emb|CBY91334.1| peptide chain release factor I (RF-1) [Neisseria meningitidis WUE 2594] Length = 358 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|261392089|emb|CAX49586.1| peptide chain release factor I (RF-1) [Neisseria meningitidis 8013] Length = 358 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|121997785|ref|YP_001002572.1| peptide chain release factor 1 [Halorhodospira halophila SL1] gi|166223563|sp|A1WVQ8|RF1_HALHL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|121589190|gb|ABM61770.1| bacterial peptide chain release factor 1 (bRF-1) [Halorhodospira halophila SL1] Length = 363 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 100/238 (42%), Positives = 150/238 (63%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AGAGG E+ +A LLRMY R+AE++ +KTE L +GE G + + Sbjct: 109 DQRNIFLEVRAGAGGDEAALFAGDLLRMYMRYAERQGWKTEILSAREGEHGGYREVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS ++ + P +D+ IE++ +D R+DT Sbjct: 169 SGRSVYARLKFESGAHRVQRVPATESQGRIHTSACTVAILPELDEVSAIEVNTADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+P+G+VV+CQ ERSQ+KN+A+A +L+A+L E E K+ Sbjct: 229 FRSSGAGGQHVNTTDSAIRITHLPSGLVVECQDERSQNKNRAKAIALLQARLTEQERAKQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P V D R + V++G +D+ + Sbjct: 289 Q--SERSEQRRLAVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKLEQVMEGGMDELL 343 >gi|322513486|ref|ZP_08066596.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976] gi|322120705|gb|EFX92589.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976] Length = 360 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 109/279 (39%), Positives = 170/279 (60%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135 DD + ++ + K E+E +Q +L D ND A+LE+ AG GG E+ +A Sbjct: 70 DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKNKA+A ++L +++ ++E ++ + A ++ + +G G +I Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P + D R N+ +V++G +D+ ++ + Sbjct: 308 RTYNY-PQGRITDHRINLTVYRLDEVMNGKIDELIQPII 345 >gi|262375291|ref|ZP_06068524.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145] gi|262309545|gb|EEY90675.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145] Length = 362 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 103/238 (43%), Positives = 146/238 (61%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K LI Sbjct: 107 DANSAYLEIRAGTGGDEAAIFSGDLFRMYSKYAENQGWRIEILSENEGEHGGYKEVICLI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P +D ++I+ +D RIDT Sbjct: 167 NGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTSVDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 227 YRASGAGGQHVNKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ V++GDL + + Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAVMEGDLTELL 341 >gi|152979102|ref|YP_001344731.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z] gi|150840825|gb|ABR74796.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z] Length = 374 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 105/244 (43%), Positives = 155/244 (63%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +AYLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + Sbjct: 121 DEYNAYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRIETLSANESEQGGYKEIIVKV 180 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ +D RIDT Sbjct: 181 IGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPETELPEINPTDLRIDT 240 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL--YELELQ 290 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ E E Q Sbjct: 241 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIAQAEQEKQ 300 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 RE+ ++ + +G G +IR+Y P V D R N+ +V++G +D+ + Sbjct: 301 AREQ----ADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELI 355 Query: 348 KATL 351 + + Sbjct: 356 QPII 359 >gi|261379805|ref|ZP_05984378.1| peptide chain release factor 1 [Neisseria subflava NJ9703] gi|284797490|gb|EFC52837.1| peptide chain release factor 1 [Neisseria subflava NJ9703] Length = 358 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAALLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|313667936|ref|YP_004048220.1| peptide chain release factor I [Neisseria lactamica ST-640] gi|313005398|emb|CBN86832.1| peptide chain release factor I [Neisseria lactamica 020-06] Length = 358 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|319776412|ref|YP_004138900.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047] gi|329123576|ref|ZP_08252138.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116] gi|317451003|emb|CBY87233.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047] gi|327470318|gb|EGF15778.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116] Length = 361 Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 153/242 (63%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 168 TGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 344 Query: 350 TL 351 + Sbjct: 345 II 346 >gi|322832986|ref|YP_004213013.1| peptide chain release factor 1 [Rahnella sp. Y9602] gi|321168187|gb|ADW73886.1| peptide chain release factor 1 [Rahnella sp. Y9602] Length = 360 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 103/242 (42%), Positives = 147/242 (60%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LE+ AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERGCFLEIRAGTGGDEAAIFAGDLFRMYSRYAEMRRWRVEIVSASEGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG K E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGEGAYGQFKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G + R+Y P V D R N+ +V++G LD ++ Sbjct: 287 Q--AEEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIQP 343 Query: 350 TL 351 + Sbjct: 344 IV 345 >gi|254805442|ref|YP_003083663.1| peptide chain release factor 1 [Neisseria meningitidis alpha14] gi|254668984|emb|CBA07320.1| peptide chain release factor 1 [Neisseria meningitidis alpha14] Length = 358 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 VDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L++ A +A Sbjct: 337 LEEITNALIA 346 >gi|302879738|ref|YP_003848302.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2] gi|302582527|gb|ADL56538.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2] Length = 362 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 120/317 (37%), Positives = 176/317 (55%), Gaps = 13/317 (4%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEVEY 101 + L RER L+ + Q C+ I + ED + +T KL + Sbjct: 36 RKLNRERAELEPVVDLFHAYQ--ACEGDIAAAREMAEDPEMREFADTEIKEGEAKLALLD 93 Query: 102 KQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 K+ ++ L + D ND +LEV AG GG E+ +A L RMY+R+AE+R+++ E + Sbjct: 94 KELQTQLLPK-DPNDERSVFLEVRAGTGGDEAALFAGDLFRMYSRFAERRRWQVEVVSES 152 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 GE G K I G AY LK E G HR+ R+ ++ R HTS ++ + P VD+ Sbjct: 153 PGEMGGYKEIIARIAGQGAYSVLKFESGAHRVQRVPATETQGRVHTSACTVAIMPEVDEV 212 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 ++ ++ +D RIDT+RASGAGGQH+N TDSAVRITHIPTGVVV+CQ RSQH+NKAQA Sbjct: 213 NDVVLNNADLRIDTFRASGAGGQHINKTDSAVRITHIPTGVVVECQDGRSQHQNKAQAMR 272 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 +L A++ + Q R + A + K+ +G G +IR+Y P V D R N+ Sbjct: 273 VLCARIK--DAQVRAQNAETAATRKSLVGSGDRSERIRTYNY-PQGRVTDHRINLTLYKM 329 Query: 336 SDVLDGDLDDFMKATLA 352 ++DG++ + A +A Sbjct: 330 DAIMDGEISELTGALMA 346 >gi|157370232|ref|YP_001478221.1| peptide chain release factor 1 [Serratia proteamaculans 568] gi|166977369|sp|A8GDA3|RF1_SERP5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157321996|gb|ABV41093.1| peptide chain release factor 1 [Serratia proteamaculans 568] Length = 361 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LEV AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DERDCFLEVRAGTGGDEAAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G LK E G HR+ R+ +S R HTS ++ V P V ++ EI+ D +IDT Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAVPEAELPEINAGDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGTGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|256751358|ref|ZP_05492237.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus CCSD1] gi|256749740|gb|EEU62765.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus CCSD1] Length = 246 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 102/236 (43%), Positives = 154/236 (65%), Gaps = 7/236 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AGAGG E+ +A+ L RMY+ +AEK+ +K E + ++ + G K L I G +Y Sbjct: 1 MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSY 60 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E GVHR+ R+ ++ R HTS +++ V P V++ +++EI+ +D +ID +R+ G Sbjct: 61 SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEE-VDVEINPNDIKIDVFRSGGH 119 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ+++ I Sbjct: 120 GGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQR--EI 177 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E+ K+++G G +IR+Y P V D R + +VLDGDLD+ + A + Sbjct: 178 AETRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALI 232 >gi|268316168|ref|YP_003289887.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252] gi|262333702|gb|ACY47499.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252] Length = 360 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 118/325 (36%), Positives = 181/325 (55%), Gaps = 9/325 (2%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ----E 87 DP + + L RE L + I+ + L + L EL E D +++ E Sbjct: 23 DPEVAADPKRLAELGREHASLRAVVEAIEAYERLLAEQESLRELIRTESDPELIRMARHE 82 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + +R+ E + + E D +A +E+ AG GG E+ +A L RMY+R+AE+ Sbjct: 83 LEELEERLPAVEEDLRLRLIPQDEMDRRNAIVEIRAGTGGDEAALFAGDLFRMYSRFAER 142 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + +K E L+ G G K +KGP+ YG +K E GVHR+ R+ +S R HTS + Sbjct: 143 KGWKLEVLDASPGTVGGFKEIIFSLKGPDVYGTMKYESGVHRVQRVPATESQGRIHTSAA 202 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S+ V P ++ +++EI D RID +RASG GGQHVN T+SAVRITH+PTG+VV CQ E+ Sbjct: 203 SVVVLPEAEE-VDVEIRPEDLRIDVFRASGPGGQHVNRTESAVRITHVPTGIVVACQDEK 261 Query: 268 SQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD- 325 SQH+N+ +A +LRA+LYELE ++ R E + +S +IR+Y P V D Sbjct: 262 SQHQNREKALRILRARLYELEQERQRAERDAVRRASIKTGDRSAKIRTYNF-PQDRVTDH 320 Query: 326 -LRTNIEKTSPSDVLDGDLDDFMKA 349 L +++ +++G+LD+ + A Sbjct: 321 RLEGDLKNWPLHRIIEGELDELINA 345 >gi|331652249|ref|ZP_08353268.1| peptide chain release factor 1 [Escherichia coli M718] gi|331050527|gb|EGI22585.1| peptide chain release factor 1 [Escherichia coli M718] Length = 360 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+A+ R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYADARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|304386835|ref|ZP_07369099.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC 13091] gi|304339089|gb|EFM05179.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC 13091] Length = 358 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITNALIA 346 >gi|121635327|ref|YP_975572.1| peptide chain release factor 1 [Neisseria meningitidis FAM18] gi|166223577|sp|A1KV95|RF1_NEIMF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120867033|emb|CAM10796.1| peptide chain release factor I [Neisseria meningitidis FAM18] gi|325132818|gb|EGC55498.1| peptide chain release factor 1 [Neisseria meningitidis M6190] gi|325138721|gb|EGC61273.1| peptide chain release factor 1 [Neisseria meningitidis ES14902] gi|325198784|gb|ADY94240.1| peptide chain release factor 1 [Neisseria meningitidis G2136] Length = 358 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|218768706|ref|YP_002343218.1| peptide chain release factor 1 [Neisseria meningitidis Z2491] gi|20139350|sp|Q9JT75|RF1_NEIMA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|121052714|emb|CAM09057.1| peptide chain release factor I [Neisseria meningitidis Z2491] Length = 358 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITNALIA 346 >gi|95929013|ref|ZP_01311758.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684] gi|95134914|gb|EAT16568.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684] Length = 358 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 125/349 (35%), Positives = 188/349 (53%), Gaps = 19/349 (5%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLC 67 +FD + V R + DP + + + + L RE L + + +IQ + Sbjct: 2 AIFDKLEEVVDRFQEVEGLLSDPTVLSDQNKFRELTREHAELSEPVEVYRRYRQIQQEIE 61 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDA---YLEVHA 123 DN L+ +DD + + + L ++ E E+ + +LL D ND LE+ A Sbjct: 62 DNRELMR----DDDPDMREMAREELPALEDECEHLAEKLTLLMLPKDPNDGKNIILEIRA 117 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +A L R Y+R+AEK ++K E + + G K +I G N Y LK Sbjct: 118 GTGGDEAALFAGDLFRAYSRYAEKHRWKVEIMSSSESGVGGFKEVIAMISGENVYSRLKY 177 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ ++ R HTS ++ V P ++ +++EI+ SD RID YRASGAGGQHV Sbjct: 178 ESGTHRVQRVPETETQGRIHTSACTVAVLPEAEE-VDLEINPSDLRIDLYRASGAGGQHV 236 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTGVVV CQ E+SQHKNKA+A +LR+++ L+ + E+ A + K Sbjct: 237 NKTESAVRITHIPTGVVVACQDEKSQHKNKARAMKVLRSRI--LDAMEAEKHAEMAADRK 294 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +++G G +IR+Y P D R + ++ GDLD+ A Sbjct: 295 SQVGSGDRSERIRTYNF-PQGRCTDHRIGLTLYKLDAIMQGDLDEVFDA 342 >gi|70725918|ref|YP_252832.1| peptide chain release factor 1 [Staphylococcus haemolyticus JCSC1435] gi|119361616|sp|Q4L7Z9|RF1_STAHJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|68446642|dbj|BAE04226.1| peptide chain release factor 1 [Staphylococcus haemolyticus JCSC1435] Length = 358 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 193/346 (55%), Gaps = 15/346 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + ++ + + + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPEIVNDSDKLRKYSKEQADLQKTVDVYRDYKSKKEEIAE 60 Query: 72 LLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 + E+ E +D +L+E S +L+ E+E +Q + LL D D +E+ A AG Sbjct: 61 IDEMLNETEDKEEIEMLKEESASLKSAIPELE-EQLKFLLIPKDPNDEKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LLRMY+++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLLRMYSKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G ++R+Y P V D R + +++G LD+ + A Sbjct: 296 GTGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDA 340 >gi|167587636|ref|ZP_02380024.1| peptide chain release factor 1 [Burkholderia ubonensis Bu] Length = 360 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 125/345 (36%), Positives = 190/345 (55%), Gaps = 17/345 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D RL+ LN ++ ++ + + L RE LD + + L D EL Sbjct: 10 DQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELDPVVGQYALWRQSLSDEAAAQELL 69 Query: 77 LEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 D S+ D ++ ++LEVE ++ LL + D + +LE+ AG GG ES Sbjct: 70 ---GDASMRDFAEDEIRSARDRMVQLEVELQKM--LLPKDPNDDRNIFLEIRAGTGGDES 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ Sbjct: 125 ALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAV Sbjct: 185 QRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 245 RVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ ++DGDLD+ + A ++ Sbjct: 303 RSERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIAALVS 346 >gi|217969845|ref|YP_002355079.1| peptide chain release factor 1 [Thauera sp. MZ1T] gi|217507172|gb|ACK54183.1| peptide chain release factor 1 [Thauera sp. MZ1T] Length = 360 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 122/322 (37%), Positives = 180/322 (55%), Gaps = 33/322 (10%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET-SDNLQRIKLEVEYKQ 103 L RER ++ ++ +E + L E DC+ +E +D R E+E + Sbjct: 38 LSRERAEIEPVVALYREHR-------------LAEADCATARELLADPEMRELGELELAE 84 Query: 104 FESLLSG-EA---------DSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 E+ + EA D NDA +LE+ AG GG E+ +A LLRMYTR+AE++++ Sbjct: 85 GEARIEALEAELQRALLPRDPNDARNLFLEIRAGTGGDEAALFAGDLLRMYTRYAERQRW 144 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E + + + G K + G AY LK E G HR+ R+ ++ R HTS ++ Sbjct: 145 KVEIVSASESDLGGYKEVIARVVGNGAYSKLKFESGGHRVQRVPVTETQGRIHTSACTVA 204 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P D+ ++I+ +D RIDT+RASGAGGQH+N TDSAVRITHIPTG+VV+CQ +RSQH Sbjct: 205 VLPEADEVEAVDINPADLRIDTFRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQH 264 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327 +NKAQA +L A+LY+ + R + + K+ +G G +IR+Y P V D R Sbjct: 265 RNKAQAMAVLAARLYDARV--RAQQSAEAAQRKSLVGSGDRSERIRTYNF-PQGRVTDHR 321 Query: 328 TNIEKTSPSDVLDGDLDDFMKA 349 N+ V+ G+LD+ + A Sbjct: 322 INLTLYKLDAVMQGELDEIVDA 343 >gi|262277608|ref|ZP_06055401.1| peptide chain release factor 1 [alpha proteobacterium HIMB114] gi|262224711|gb|EEY75170.1| peptide chain release factor 1 [alpha proteobacterium HIMB114] Length = 355 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 109/250 (43%), Positives = 151/250 (60%), Gaps = 8/250 (3%) Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 LE + K F L EAD +A +E+ AG GG E+ +A L MY + A +KTE + Sbjct: 92 LETKIKIF-MLPKDEADEKNAIIEIRAGTGGLEASLFAGDLFEMYQKVASNNGWKTEIIS 150 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 I D + G K + G N + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 151 ISDSDAGGYKEVVFSVTGKNVFSKLKFESGVHRVQRVPKTETQGRVHTSAATVAVLPEAE 210 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D ++++I E++ RID +R+SG GGQ VNTTDSAVRITHIP+G+VV Q E+SQHKNKA+A Sbjct: 211 D-VDVKIDENELRIDVFRSSGPGGQSVNTTDSAVRITHIPSGIVVSQQDEKSQHKNKAKA 269 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LR+KLYELE K E+ + K++IG G +IR+Y P V D R N+ Sbjct: 270 LKILRSKLYELERSKLEK--ERSSARKSQIGSGDRSERIRTYNF-PQGRVTDHRINLTLH 326 Query: 334 SPSDVLDGDL 343 SD L GD+ Sbjct: 327 KLSDFLSGDV 336 >gi|50365449|ref|YP_053874.1| peptide chain release factor 1 [Mesoplasma florum L1] gi|61214613|sp|Q6F0I3|RF1_MESFL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|50364005|gb|AAT75990.1| peptide chain release factor 1 [Mesoplasma florum L1] Length = 363 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 105/240 (43%), Positives = 142/240 (59%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A LLRMY +AE + +K L+ + E G + ++ Sbjct: 110 DDKNVIVEIRGAAGGDEANIFAGDLLRMYKLYAETQNWKITMLDANSSEAGGFSQVSFMV 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ ++ R TS +++ V P + D +EIEI SD RIDT Sbjct: 170 KGDRVYSKLKFESGAHRVQRVPKTEAKGRIQTSTATVAVLPEMSD-VEIEIKNSDLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTGVV Q RSQH NK A MLRA++YE EL+K+ Sbjct: 229 YRSSGAGGQHVNTTDSAVRITHIPTGVVAASQDGRSQHDNKDIAMTMLRARIYEAELEKQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + K +G G +IR+Y P V D R + V++G +DDF+ A Sbjct: 289 Q--AEADATRKNAVGTGARSEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGKIDDFIIA 345 >gi|300723054|ref|YP_003712352.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC 19061] gi|297629569|emb|CBJ90172.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC 19061] Length = 360 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DERNCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P V ++ EI+ D +IDT Sbjct: 167 SGEQVYGHLKFESGGHRVQRVPETESQGRIHTSACTVAILPEVPEAELPEINPGDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E++KR Sbjct: 227 YRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMRKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E + +G G + R+Y P V D R N+ ++++G LD ++ Sbjct: 287 QEAE--ASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLEEIMEGKLDMLIQP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|325527071|gb|EGD04495.1| peptide chain release factor 1 [Burkholderia sp. TJI49] Length = 360 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 109/262 (41%), Positives = 161/262 (61%), Gaps = 9/262 (3%) Query: 95 IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 ++LEVE ++ LL + D + +LE+ AG GG ES +A LLRMY R+AE+++++ E Sbjct: 90 VRLEVELQKM--LLPKDPNDDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVE 147 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + + G K + I G AY LK E G HR+ R+ ++ R HTS ++ V P Sbjct: 148 MMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMP 207 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK Sbjct: 208 EADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNK 267 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +A +L A++ + Q E+ A + K+ IG G +IR+Y P + D R N+ Sbjct: 268 DRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINL 324 Query: 331 EKTSPSDVLDGDLDDFMKATLA 352 ++DGDLD+ + A ++ Sbjct: 325 TLYRLEAIMDGDLDELIGALVS 346 >gi|197104299|ref|YP_002129676.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1] gi|196477719|gb|ACG77247.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1] Length = 377 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 120/285 (42%), Positives = 173/285 (60%), Gaps = 23/285 (8%) Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQD 132 AL D+ L+E L+R EV +LL D ++ A LEV AG GG E+ Sbjct: 93 ALARDELEALKERLPELER---EV------ALLLAPKDKDENASAILEVRAGTGGDEAAL 143 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+A+ R ++ E I +G+ G K I G +G LK E GVHR+ R Sbjct: 144 FAGDLFRMYQRYAQTRGWRVEIDSISEGDAGGYKEIIASITGEGVFGRLKFESGVHRVQR 203 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P V+D +EIE+ + D RIDTYR+SGAGGQHVN TDSAVRI Sbjct: 204 VPATEAQGRIHTSAATVAVLPEVED-VEIEVRDQDIRIDTYRSSGAGGQHVNKTDSAVRI 262 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGWG-- 309 TH+PTG+VV E+SQH+N+A+A +L+A+LYE Q+RE + + ES K+++G G Sbjct: 263 THLPTGIVV-TSSEKSQHQNRARAMKVLKARLYE---QQREALDSARAESRKSQVGSGDR 318 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 +IR+Y P V D R N+ + + V++G+ LDD ++ +A Sbjct: 319 SERIRTYNF-PQGRVTDHRINLTLYNLAKVMEGEALDDVIEPLIA 362 >gi|251792741|ref|YP_003007467.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700] gi|247534134|gb|ACS97380.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700] Length = 360 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 104/243 (42%), Positives = 155/243 (63%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K L+ Sbjct: 107 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAELKRWRVEVLSENESEQGGFKEIIALV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ SD RIDT Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L ++L + Q++ Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGMVVECQDERSQHKNKAKALSVLASRLVQ---QEQ 283 Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +++A ++ + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 284 DKLAQEQADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQ 342 Query: 349 ATL 351 + Sbjct: 343 PII 345 >gi|126209498|ref|YP_001054723.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae L20] gi|126098290|gb|ABN75118.1| Peptide chain release factor 1 (RF-1) [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 333 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/279 (39%), Positives = 169/279 (60%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135 DD + ++ + K E+E +Q +L D ND A+LE+ AG GG E+ +A Sbjct: 43 DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 102 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 103 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 162 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHI Sbjct: 163 TESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHI 222 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV+CQ ERSQHKNKA+A +L +++ ++E ++ + A ++ + +G G +I Sbjct: 223 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQER--QAAEQADTRRNLLGSGDRSDKI 280 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++G +D+ ++ + Sbjct: 281 RTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPII 318 >gi|283785500|ref|YP_003365365.1| peptide chain release factor 1 [Citrobacter rodentium ICC168] gi|282948954|emb|CBG88557.1| peptide chain release factor 1 [Citrobacter rodentium ICC168] Length = 360 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 103/242 (42%), Positives = 152/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +++GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAETRRWRVEIMSMNEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 YRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + +G G + R+Y P V D R N+ +V++G LD ++ Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEP 343 Query: 350 TL 351 + Sbjct: 344 VV 345 >gi|255323257|ref|ZP_05364392.1| peptide chain release factor 1 [Campylobacter showae RM3277] gi|255299780|gb|EET79062.1| peptide chain release factor 1 [Campylobacter showae RM3277] Length = 355 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 123/309 (39%), Positives = 172/309 (55%), Gaps = 20/309 (6%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILLELALEEDDCSILQET 88 DP + ++ L +E+ +L++ S K L D N LL DD + + Sbjct: 22 DPSITNDIANMTKLSKEQSNLEDIASAAKSYLQTLADIEENKALL------DDAELGELA 75 Query: 89 SDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRW 144 D L+ ++ + E + E +L D ND +LE+ AG GG E+ +A L YTR+ Sbjct: 76 KDELKNLESQKENLEEEIKILLLPKDPNDDKNVFLEIRAGTGGDEAALFAGDLFNAYTRY 135 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AE R +K E + +G G K LLIKG AY LK E G HR+ R+ +S R HT Sbjct: 136 AELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPETESQGRVHT 195 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S ++ + P V+DS EIEI+ +D RID R+SG GGQ VNTTDSAVRITHIPTG+VV Q Sbjct: 196 SAVTVAIMPEVEDS-EIEINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVTNQ 254 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQ 321 +SQHKNK A +L+A+LY E+Q+ E +A K+++G G +IR+Y P Sbjct: 255 DGKSQHKNKEAAMKVLKARLY--EIQEEERLAKETSERKSQVGTGDRSGRIRTYNF-PQN 311 Query: 322 MVKDLRTNI 330 + D R N+ Sbjct: 312 RISDHRINL 320 >gi|146311983|ref|YP_001177057.1| peptide chain release factor 1 [Enterobacter sp. 638] gi|166977363|sp|A4WBC6|RF1_ENT38 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145318859|gb|ABP61006.1| bacterial peptide chain release factor 1 (bRF-1) [Enterobacter sp. 638] Length = 360 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 109/279 (39%), Positives = 164/279 (58%), Gaps = 10/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 DD + + + LQ K E +Q + LL D +A++EV AG GG E+ +A Sbjct: 70 DDPEMREMAQEELQEAKARAEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE R+++ E + ++GE G K I G YG LK E G HR+ R+ Sbjct: 130 DLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVPA 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P V ++ +I+ D RIDT+R+SGAGGQHVNTTDSA+RITH+ Sbjct: 190 TESQGRIHTSACTVAVMPEVPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSAIRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI--- 312 PTG+VV+CQ ERSQHKNKA+A ++L +++ E+ KR++ + + +G G + Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGSRIRAAEIAKRQQAE--ASTRRNLLGSGDRSDRN 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ ++++G LD ++ + Sbjct: 308 RTYNF-PQGRVTDHRINLTIYRLDEIMEGKLDSLIEPIV 345 >gi|323142096|ref|ZP_08076944.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT 12067] gi|322413483|gb|EFY04354.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT 12067] Length = 355 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 116/337 (34%), Positives = 188/337 (55%), Gaps = 11/337 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K DP + + + L+ ++ +E +D + EL DD ++ Sbjct: 15 LEAKISDPEVIADQTNWLKATKAHAKLEPIVTAYREYRDMIKARDEAEELLAAGDDEELV 74 Query: 86 QETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141 + + L+ +K ++E Y++ ++L +D ND +E+ GAGG E+ +A +L RMY Sbjct: 75 EMAKEELKELKPQIEEYEEKLTILLLPSDPNDDKNVIVEIRGGAGGDEAALFAGVLFRMY 134 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+AE R ++ E ++ + E G K I G + Y +K E GVHR+ R+ +S R Sbjct: 135 LRYAETRGWRVEVMDSNPTELGGFKEVVFQISGDSVYSRMKFESGVHRVQRVPETESQGR 194 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS ++ V P ++ +++EI+ +D R+DTYRA GAGGQ+VN T+SAVRITHIPTG+V Sbjct: 195 VHTSTVTVAVLPEAEE-VDVEINPADLRVDTYRAGGAGGQYVNKTESAVRITHIPTGIVA 253 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 QCQ E+SQ KN+ + +LRA++ LE + E+ A E K+++G G +IR+Y Sbjct: 254 QCQDEKSQLKNREKCMRVLRARI--LEQAQEEQRAATAEDRKSQVGTGDRSERIRTYNY- 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P V D R + +++GDLD+ + A + K+ Sbjct: 311 PQGRVTDHRIGLTLHKLDSIVNGDLDELLGALITAKQ 347 >gi|91792280|ref|YP_561931.1| peptide chain release factor 1 [Shewanella denitrificans OS217] gi|119361603|sp|Q12QR8|RF1_SHEDO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91714282|gb|ABE54208.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella denitrificans OS217] Length = 361 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 112/314 (35%), Positives = 179/314 (57%), Gaps = 7/314 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L +E L++ + K Q D E+ L+EDD + + + ++ K +E Sbjct: 36 RALSKEYSQLEDVVKSFKAFQQAQLDLASAKEM-LQEDDAEMREMAQEEMKAAKKVIEQL 94 Query: 103 QFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + E +L D ND A+LE+ AGAGG E+ +A L RMY+R+ E K++ E + ++ Sbjct: 95 EDELQILLLPKDPNDDTNAFLEIRAGAGGDEAAIFAGDLFRMYSRFCEANKWQVEVMNVN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 + + G K + + G YG LK E G HR+ R+ +S R HTS ++ V V ++ Sbjct: 155 EADLGGFKEIIVKVSGEGVYGKLKYESGGHRVQRVPETESQGRVHTSACTVVVLHEVPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I I+ +D ++DT+RASGAGGQHVN TDSA+RITHIP+G++V+CQ +RSQHKN+AQA + Sbjct: 215 EAISINPADLKVDTFRASGAGGQHVNKTDSAIRITHIPSGIIVECQDQRSQHKNRAQAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L A++ +E +KR S G +IR+Y P V D R N+ ++ Sbjct: 275 VLAARIQAIEDEKRRSAEETTRRSLVASGDRSERIRTYNY-PQGRVSDHRINLTLYRLNE 333 Query: 338 VLDGDLDDFMKATL 351 +++GDL+ ++ + Sbjct: 334 IMEGDLNALLEPIM 347 >gi|144897745|emb|CAM74609.1| peptide chain release factor RF-1 [Magnetospirillum gryphiswaldense MSR-1] Length = 352 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 121/307 (39%), Positives = 179/307 (58%), Gaps = 17/307 (5%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109 Q L A + + E + + D + +LA EE L+ET L+R +V Q L Sbjct: 47 QALKKARADMAEAEAMMADP-DMKDLAAEE--YYALKETLPGLER---DV---QLMLLPK 97 Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 EAD +A LEV AG GG E+ +A L RMY R+A R ++ E +++++ G+K A+ Sbjct: 98 DEADEKNAILEVRAGTGGEEAALFAAELFRMYERYASVRGWRFEVMDVNETGIGGMKEAS 157 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 I G + LK E GVHR+ R+ +S R HTS +++ + P ++ ++I+I + D R Sbjct: 158 ATITGRGVFARLKFESGVHRVQRVPATESGGRIHTSAATVAIMPEAEE-VDIQIDDKDLR 216 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 D YR+ G+GGQ VNTTDSAVR+THIPTG+ V CQQE+SQHKNKA A +LRA+LYE+E Sbjct: 217 FDVYRSQGSGGQSVNTTDSAVRVTHIPTGLAVACQQEKSQHKNKATAMKLLRARLYEME- 275 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345 + + A + K+++G G +IR+Y P V D R N+ D+++G LD+ Sbjct: 276 -RASKAAERAANRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKIDDMMNGTALDE 333 Query: 346 FMKATLA 352 A +A Sbjct: 334 VADALIA 340 >gi|90412790|ref|ZP_01220790.1| peptide chain release factor 1 [Photobacterium profundum 3TCK] gi|90326149|gb|EAS42576.1| peptide chain release factor 1 [Photobacterium profundum 3TCK] Length = 362 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 111/287 (38%), Positives = 173/287 (60%), Gaps = 14/287 (4%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D+ + E+A EE ++E+ N+ R++ E+ Q + D + ++E+ AGAGG Sbjct: 72 DDPEMREMAQEE-----VKESKANILRLEDEL---QVLLIPKDPNDDRNCFVEIRAGAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE+R ++ E + + E+ G K + G AYG LK E G Sbjct: 124 DEAGIFAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGILKFESGG 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + ++ EI+ D +IDT+R+SGAGGQHVNTTD Sbjct: 184 HRVQRVPATESQGRVHTSACTVAVMPEIPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTD 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR A + + +G Sbjct: 244 SAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRH--AEEASTRRNLLG 301 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + ++V++GDLD ++ + Sbjct: 302 SGDRSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDSLIQPVI 347 >gi|160935042|ref|ZP_02082428.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753] gi|156866495|gb|EDO59867.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753] Length = 358 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 178/291 (61%), Gaps = 20/291 (6%) Query: 71 ILLELALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHA 123 +L E LE+D + L+E ++L++I E++ +L D ND +E+ Sbjct: 64 LLAEGGLEKDFREMVELELEEARESLEKISEELK------ILLLPKDPNDDRNVIVEIRG 117 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG E+ ++ L RMY+ +AE +++KTE L ++ E G K + +I G AY +K Sbjct: 118 GAGGEEAALFSASLFRMYSMYAETKRWKTEILNANETELGGYKEISFMITGEGAYSRMKY 177 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ ++ R HTS ++ V P +D +E+EI+ SD +IDT+R+ GAGGQH+ Sbjct: 178 ESGVHRVQRVPETETQGRIHTSTVTVAVLPEAED-VEVEINPSDLKIDTFRSGGAGGQHI 236 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSA+RITH+PTG+VV+CQ ERSQ+KNK +A +L+++L E E +K++ + + K Sbjct: 237 NKTDSAIRITHLPTGLVVECQDERSQYKNKDKAMKVLKSRLLEAEREKQQN--EVAQERK 294 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +++G G +IR+Y P + D R + DV++G+LD+ + A + Sbjct: 295 SQVGTGDRSERIRTYNF-PQGRLTDHRIGLTLYRLEDVMNGNLDEVIDALI 344 >gi|89054297|ref|YP_509748.1| peptide chain release factor 1 [Jannaschia sp. CCS1] gi|119361551|sp|Q28RD9|RF1_JANSC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|88863846|gb|ABD54723.1| bacterial peptide chain release factor 1 (bRF-1) [Jannaschia sp. CCS1] Length = 354 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 108/253 (42%), Positives = 154/253 (60%), Gaps = 8/253 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L AD+ A +E+ G GG E+ +A LLRMYTR+AE R ++ E +++ + + Sbjct: 95 QLALLPKDAADAKPAMIEIRPGTGGDEAALFAGDLLRMYTRYAEARGWRLEIVDLQESDL 154 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 GIK T ++G N + LK E GVHR+ R+ +S R HTS +++ V P +D ++I+ Sbjct: 155 GGIKECTARVEGENVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDID 213 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I +D RIDT RASGAGGQHVNTTDSAVRITH+P+G+VV E+SQH+N+ A LR Sbjct: 214 IPATDIRIDTMRASGAGGQHVNTTDSAVRITHVPSGIVV-VSSEKSQHRNREIAMQTLRT 272 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 +LY+LE QK ++ + K +IG G +IR+Y P + D R N+ V+ Sbjct: 273 RLYDLERQKADD--AMAADRKAQIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDAVM 329 Query: 340 DGDLDDFMKATLA 352 GDLD+ + A A Sbjct: 330 LGDLDEIVDALTA 342 >gi|332978486|gb|EGK15198.1| peptide chain release factor RF1 [Psychrobacter sp. 1501(2011)] Length = 362 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 121/348 (34%), Positives = 190/348 (54%), Gaps = 38/348 (10%) Query: 12 GLFDWDNAVQRLSFLNTK-TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G +N + LS +++ +E LWQ +A+ ++Q +A+ I E D + Sbjct: 27 GTISDNNKFRELSMEHSELSEITSLWQRYRQAET---DKQ---DALEMINEASDPEMKAM 80 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGG 127 + E+ DD + ++E + + K D ND A+LE+ AG GG Sbjct: 81 MQEEIDSAADDIAAMEEELNVMMLPK----------------DPNDKVPAFLEIRAGTGG 124 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ ++ L RMY R+A + + E L ++GE G K + G + YG LK E G Sbjct: 125 DEAAIFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIITRVSGNDVYGRLKFESGA 184 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P V +E++ +D R+DT+R+SGAGGQHVNTTD Sbjct: 185 HRVQRVPETESQGRVHTSACTVAVMPEVKIDDTVELNPADIRMDTFRSSGAGGQHVNTTD 244 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN------IGES 301 SAVR+THIPTGVV +CQQERSQHKN+A+A ML A++ + ++Q++ + A+ +G Sbjct: 245 SAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADALRRNLVGSG 304 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++E +IR+Y P + D R N+ +++GDLD+ + A Sbjct: 305 DRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLDELLDA 346 >gi|282857117|ref|ZP_06266363.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455] gi|282585052|gb|EFB90374.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455] Length = 358 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 128/343 (37%), Positives = 189/343 (55%), Gaps = 32/343 (9%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCD--NLI------LLE 74 L K DP + ++ E + L R+ L+ + ++++D + + L+ L E Sbjct: 17 LEKKMADPAVVSDIKEMQNLGRKHSELEEVVGDYRRYRQVRDEIAEAKELVGGGDHELAE 76 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 LA E L+E L +I+ E + L D D +E+ AG GG E+ +A Sbjct: 77 LAKME-----LEEKEPLLGKIE---EQLRVALLPKDPNDEKDVIMEIRAGTGGDEASLFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE+ +K E ++ ++ E G K L I G Y LK E GVHR+ R+ Sbjct: 129 ADLFRMYSRYAEREGWKLEIVDENETEVGGYKEIVLQIHGRGVYSQLKYESGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V PV DD I+IEI D +IDTYR+SGAGGQHVN TDSAVRITH Sbjct: 189 ATEAGGRIHTSAATVVVMPVADD-IDIEIRPEDLKIDTYRSSGAGGQHVNMTDSAVRITH 247 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR------EEIANIGESSKTEIGW 308 +PTG+VV CQ ERSQ KN+A+A +L+ +LY+ E++K+ E IG ++E Sbjct: 248 LPTGLVVTCQDERSQIKNRAKALQVLKTRLYDAEVEKQRSAESAERKGMIGSGDRSE--- 304 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + ++DGDL + +KA + Sbjct: 305 --RIRTYNY-PQNRVTDHRIGLTLYKLEYMMDGDLYEMIKALV 344 >gi|968930|gb|AAC43437.1| peptide chain release factor 1 [Escherichia coli] Length = 360 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|317499018|ref|ZP_07957299.1| peptide chain release factor 1 [Lachnospiraceae bacterium 5_1_63FAA] gi|291560728|emb|CBL39528.1| bacterial peptide chain release factor 1 (bRF-1) [butyrate-producing bacterium SSC/2] gi|316893668|gb|EFV15869.1| peptide chain release factor 1 [Lachnospiraceae bacterium 5_1_63FAA] Length = 357 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 131/358 (36%), Positives = 195/358 (54%), Gaps = 32/358 (8%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD + V RL + + DP + N + LM+E+ L + KE + + D Sbjct: 1 MFDKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIED 60 Query: 69 NLILLE---------LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 +L+LLE LA EE L E+ N++R++ E+ + + D + + Sbjct: 61 SLMLLEEESDEEMKELAKEE-----LNESKANVERLEEEL---KILLIPKDPMDDKNIIV 112 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ AGAGG E+ + + RMY +AE +++K L ++ G K ++ G AY Sbjct: 113 EMRAGAGGDEAGLFVADVARMYRNYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYS 172 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 K E GVHR+ RI +S R HTS ++ + P V+D +E+EI +DC+ D +RASG G Sbjct: 173 RFKYESGVHRVQRIPATESGGRIHTSTITVAIMPEVED-VEVEIDMNDCKFDVFRASGNG 231 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIAN 297 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ KNK +A +LR++LYELE QK EE A Sbjct: 232 GQCVNTTDSAVRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDEEAA- 290 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IG G +IR+Y P V D R + +++GDLD+ + + A Sbjct: 291 ---KRKSQIGTGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTA 344 >gi|163867491|ref|YP_001608690.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476] gi|189039959|sp|A9IMM3|RF1_BART1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|161017137|emb|CAK00695.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476] Length = 358 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A +E+ AG GG+E+ ++ L RMY R+A +K E + + +GE G K Sbjct: 107 ADEKSAIVEIRAGTGGSEAALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ RI ++ R HTS +++ V P ++ I+I+I D RID Sbjct: 167 ISGKGVFSKLKYESGVHRVQRIPETETGGRIHTSAATVAVLPEAEE-IDIDIRPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E + S K+++G G +IR+Y P V D R N+ +L+GDLD+ + Sbjct: 285 VE--SERSASRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDEIIH 341 Query: 349 ATLA 352 A ++ Sbjct: 342 ALIS 345 >gi|54309994|ref|YP_131014.1| peptide chain release factor 1 [Photobacterium profundum SS9] gi|61214628|sp|Q6LNB4|RF1_PHOPR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46914433|emb|CAG21212.1| putative peptide chain release factor A [Photobacterium profundum SS9] Length = 362 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 111/287 (38%), Positives = 173/287 (60%), Gaps = 14/287 (4%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D+ + E+A EE ++E+ N+ R++ E+ Q + D + ++E+ AGAGG Sbjct: 72 DDPEMREMAQEE-----VKESKANILRLEDEL---QVLLIPKDPNDDRNCFVEIRAGAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE+R ++ E + + E+ G K + G AYG LK E G Sbjct: 124 DEAGIFAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGVLKFESGG 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P V ++ EI+ D +IDT+R+SGAGGQHVNTTD Sbjct: 184 HRVQRVPATESQGRVHTSACTVAVMPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTD 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR A + + +G Sbjct: 244 SAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARITKAEEEKRH--AEEASTRRNLLG 301 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + ++V++GD+D ++ + Sbjct: 302 SGDRSDRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDMDSLIQPVI 347 >gi|194332966|ref|YP_002014826.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271] gi|238693294|sp|B4S385|RF1_PROA2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194310784|gb|ACF45179.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271] Length = 357 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 104/241 (43%), Positives = 154/241 (63%), Gaps = 4/241 (1%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSAT 169 EADS + +E+ AG GG E+ +A LLRMY R+AE+R +K E LE ++ G K A+ Sbjct: 104 EADSRNVIMEIRAGTGGDEAALFATDLLRMYQRFAERRGWKCELLEFNEANTPGACKEAS 163 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + I G + YG +K E GVHR+ R+ ++ R HTS +S+ V P ++ ++IEI + D R Sbjct: 164 MAISGHDVYGIMKFESGVHRVQRVPETETQGRIHTSAASVAVLPEAEE-VDIEIRKDDLR 222 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +DT+R+ G GGQ+VN ++AVRITH P+G+VV CQ+ERSQ +N+ +A MLRAKLY+ EL Sbjct: 223 VDTFRSGGKGGQNVNKVETAVRITHAPSGIVVACQEERSQLQNRERAMKMLRAKLYDREL 282 Query: 290 -QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 K +E A++ +S + +IR+Y P V D R + +LDG+LDD ++ Sbjct: 283 ADKNKERADLRKSMVSSGDRSAKIRTYNF-PQSRVTDHRIGYTSHALPQILDGNLDDLIE 341 Query: 349 A 349 A Sbjct: 342 A 342 >gi|291460253|ref|ZP_06599643.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078 str. F0262] gi|291417200|gb|EFE90919.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078 str. F0262] Length = 360 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 115/322 (35%), Positives = 177/322 (54%), Gaps = 11/322 (3%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P L ++ + L+RE+ L+ + LEL +E D +L+ + L Sbjct: 24 PELSNDIARYRKLIREQSELEPLYKTYLAFRKAEESERDALELLQKEKDPELLEMAKEEL 83 Query: 93 QRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 Q K E E + L E D + +E+ GAGG E+ +A L RMY +AE+R Sbjct: 84 QNAKEEQSLLGEKLRLLLLPKDENDDKNIVMEIRGGAGGEEAALFAAELYRMYMSYAERR 143 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F+TE + H+ G+K ++ G AY LK E GVHR+ R+ +S R HTS ++ Sbjct: 144 GFRTELVSFHETGLGGLKEVIFIVDGQGAYSRLKYESGVHRVQRVPETESGGRIHTSTAT 203 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P + +E+EI SD R++ +R+SGAGGQH+N T SAVR+ HIP+G+V +CQ+ERS Sbjct: 204 VAVMPEAGE-VEVEIKPSDVRMEVFRSSGAGGQHINKTSSAVRLIHIPSGMVAECQEERS 262 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKD 325 Q +N+ +A +LRA+LYE+E +KR E + ++++G G +IR+Y P V D Sbjct: 263 QLQNREKAMRLLRARLYEIESRKRHEES--AAEKRSQLGTGERSEKIRTYNF-PQGRVTD 319 Query: 326 LRTNIEKTSPSDVLDGDLDDFM 347 R + ++L GDLD + Sbjct: 320 HRIKLSLYCLEEILGGDLDPLI 341 >gi|167766740|ref|ZP_02438793.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1] gi|167711494|gb|EDS22073.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1] Length = 366 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 131/358 (36%), Positives = 195/358 (54%), Gaps = 32/358 (8%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD + V RL + + DP + N + LM+E+ L + KE + + D Sbjct: 10 MFDKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIED 69 Query: 69 NLILLE---------LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 +L+LLE LA EE L E+ N++R++ E+ + + D + + Sbjct: 70 SLMLLEEESDEEMKELAKEE-----LNESKANVERLEEEL---KILLIPKDPMDDKNIIV 121 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ AGAGG E+ + + RMY +AE +++K L ++ G K ++ G AY Sbjct: 122 EMRAGAGGDEAGLFVADVARMYRSYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYS 181 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 K E GVHR+ RI +S R HTS ++ + P V+D +E+EI +DC+ D +RASG G Sbjct: 182 RFKYESGVHRVQRIPATESGGRIHTSTITVAIMPEVED-VEVEIDMNDCKFDVFRASGNG 240 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIAN 297 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ KNK +A +LR++LYELE QK EE A Sbjct: 241 GQCVNTTDSAVRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDEEAA- 299 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IG G +IR+Y P V D R + +++GDLD+ + + A Sbjct: 300 ---KRKSQIGTGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTA 353 >gi|293398675|ref|ZP_06642853.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62] gi|291611146|gb|EFF40243.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62] Length = 358 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREVQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|261253598|ref|ZP_05946171.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891] gi|260936989|gb|EEX92978.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891] Length = 362 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 118/319 (36%), Positives = 182/319 (57%), Gaps = 11/319 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + N + + L +E L+ + Q + ++L+ E +EDD + + + Sbjct: 25 DPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQ-QAQEDLVAAEEMAKEDDEEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+++AEK Sbjct: 84 IKDAKETIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 KGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A +L A++ + E KR A + ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMAVLAARIIQAEEAKR--AAEVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDL 343 D R N+ ++V++GD+ Sbjct: 321 DHRINLTVYRLNEVMEGDV 339 >gi|291612728|ref|YP_003522885.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1] gi|291582840|gb|ADE10498.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1] Length = 360 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 147/243 (60%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A + RMY R+AE+R+++ E + GE G K I Sbjct: 107 DERNVFLEVRAGTGGDEAAIFAGDIFRMYVRFAERRRWQVEIISESPGEMGGYKEVIARI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ + P D+ E+E++ ++ RIDT Sbjct: 167 IGQGAYSVLKFESGAHRVQRVPATETQGRIHTSACTVAILPEADEVGEVELNPAELRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG VV+CQ RSQH+NKAQA +L A++ + Q++ Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGTVVECQDGRSQHQNKAQAMRVLAARIK--DKQEQ 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + I K+ +G G +IR+Y P V D R N+ ++DGD+ + A Sbjct: 285 EAHSKIAAERKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKMDQIMDGDISELTNA 343 Query: 350 TLA 352 +A Sbjct: 344 LMA 346 >gi|331006967|ref|ZP_08330210.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989] gi|330419229|gb|EGG93652.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989] Length = 360 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 100/241 (41%), Positives = 150/241 (62%), Gaps = 10/241 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ ++ L RMY+++AEKR+++ E + E+ G K I Sbjct: 109 DDKNVFLEIRAGTGGDEAAIFSGDLFRMYSKYAEKRRWQVEIVSESRSEQGGYKEVIARI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ + P D E+ I+++D R+DT Sbjct: 169 VGQGVYSQLKFESGAHRVQRVPETESQGRVHTSACTVAIMPEADAQAEVAINKADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+R+THIPTGVVV+CQ ERSQHKN+A+A ++L A+L + Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDERSQHKNRARAMSLLAARLQSAQ---- 284 Query: 293 EEIA--NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +++A + + K +G G +IR+Y P V D R N+ ++V++GDLDD + Sbjct: 285 DDVAAKEMADERKNLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYRLNEVMEGDLDDVV 343 Query: 348 K 348 + Sbjct: 344 Q 344 >gi|303228461|ref|ZP_07315294.1| peptide chain release factor 1 [Veillonella atypica ACS-134-V-Col7a] gi|303230754|ref|ZP_07317501.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6] gi|302514514|gb|EFL56509.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6] gi|302516963|gb|EFL58872.1| peptide chain release factor 1 [Veillonella atypica ACS-134-V-Col7a] Length = 360 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 119/332 (35%), Positives = 186/332 (56%), Gaps = 12/332 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDD 81 L + DP + E + L R+ L + +E + L +E+ ++E+ Sbjct: 16 LEQRISDPEVIARQDEWRKLTRQHAQLSETVEAFREYKKVLAGIDEAMEVIEDKTMDEEF 75 Query: 82 CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + QE L+ K E+E K Q L D + +E+ GAGG E+ +A L RM Sbjct: 76 REMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEAALFAGDLFRM 135 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YT++AE + ++ E ++ ++ E G K + G N Y +K E GVHR+ R+ ++ Sbjct: 136 YTKYAESQGWRCEIIDANEPELGGFKEVVFSVDGENVYSKMKFESGVHRVQRVPATETQG 195 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V P ++D ++IEI++ D +IDTYRASGAGGQH+N T+SAVRITH+PTG+V Sbjct: 196 RVHTSTVTVAVLPEMED-VDIEINDKDLKIDTYRASGAGGQHINKTESAVRITHLPTGIV 254 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ +RSQ +N+ +A +LRAKL + Q E A++ K+++G G +IR+Y Sbjct: 255 VACQDQRSQLQNREKAMRVLRAKLQDKAEQ--EATASMAADRKSQVGTGDRSERIRTYNY 312 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R N+ +L+GDLD+ ++A Sbjct: 313 -PQGRVTDHRINLTLYKLDAILNGDLDEIIQA 343 >gi|163783081|ref|ZP_02178076.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1] gi|159881761|gb|EDP75270.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1] Length = 361 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 129/328 (39%), Positives = 187/328 (57%), Gaps = 14/328 (4%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETS 89 P + Q+V + L RE + L +E +Q L + LL+ + E++ + QE Sbjct: 27 PEVIQDVKRYRELSREHKELAELYETYQEYKRLQRELNEAKELLK-SPEKELKELAQEEI 85 Query: 90 DNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +++Q RI E + + DS + LE+ AG GG E+ + LLRMY ++AE + Sbjct: 86 EDIQSRIPELEEKLKLLLVPKDPNDSKNVILEIRAGTGGEEAALFVADLLRMYQKYAEDK 145 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K L + G K LI+G AY LK E GVHR+ RI +S R HTS ++ Sbjct: 146 GWKFSILNANKTGLGGYKEVIALIEGEGAYSRLKYESGVHRVQRIPVTESGGRIHTSTAT 205 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P D++ ++EI+ D +I+T+RASGAGGQ+VNTT++AVRITH PTG+VV CQ ERS Sbjct: 206 VAVLPEADEA-DVEINPQDLKIETFRASGAGGQYVNTTETAVRITHTPTGIVVSCQDERS 264 Query: 269 QHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 Q +NK +A +L AKL + E +KREEIA K ++G G +IR+Y P V Sbjct: 265 QFQNKQKALKILYAKLKDFYERKKREEIAR---ERKEQVGTGERSEKIRTYNF-PQNRVT 320 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R N+ +DVL+G LD+F+ A A Sbjct: 321 DHRVNLTLYKLNDVLEGKLDEFIDALRA 348 >gi|317401193|gb|EFV81839.1| peptide chain release factor 1 [Achromobacter xylosoxidans C54] Length = 360 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 125/342 (36%), Positives = 187/342 (54%), Gaps = 19/342 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQDRLCDNLILLELA 76 RL ++ +P ++ + L RER L+ + +F++ +D L + Sbjct: 14 HRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFVRGEED-----LATAQEM 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDW 133 L + + + E R+KLE + LL D ND +LE+ AG GG ES + Sbjct: 69 LADPELKAMAEDEIKSGRVKLESLEAALQLLLLPR-DPNDGRSVFLEIRAGTGGDESALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 + LLRMYTR+AE+R ++ E + E G K I+G AYG LK E G HR+ R+ Sbjct: 128 SGDLLRMYTRYAEQRGWRVELMSESPSELGGYKEVIARIEGDGAYGRLKFESGAHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS ++ + D+ EI I+ SD RIDT+RASGAGGQH+N TDSAVRIT Sbjct: 188 PATEAQGRIHTSACTVAIMAEADEMSEIVINPSDLRIDTFRASGAGGQHINKTDSAVRIT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VV+CQ +RSQH+NK +A +L A+L + E ++R+ + K+ IG G Sbjct: 248 HLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQ--SKEAAERKSLIGSGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++GDL++ A +A Sbjct: 306 RIRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIA 346 >gi|325204648|gb|ADZ00102.1| peptide chain release factor 1 [Neisseria meningitidis M01-240355] Length = 358 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 VDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITNALIA 346 >gi|194290876|ref|YP_002006783.1| peptide chain release factor 1 [Cupriavidus taiwanensis LMG 19424] gi|238692779|sp|B3R722|RF1_CUPTR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|193224711|emb|CAQ70722.1| peptide chain release factor RF-1 [Cupriavidus taiwanensis LMG 19424] Length = 360 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 127/348 (36%), Positives = 186/348 (53%), Gaps = 21/348 (6%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDN 69 L D +RL +N N+ + + L RE L S ++ QD L Sbjct: 6 LAKLDQLAERLDEVNALLAREDATANIDQYRKLSREHAELSPVAEQYSQYRQAQDDLATA 65 Query: 70 LILLELALEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124 LL DD + +D + R +LE + LL + D ND LE+ AG Sbjct: 66 QALL------DDPEMKDFAADEIAAARDRLEALQASLQRLLLPK-DPNDDRNLLLEIRAG 118 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG ES +A LLRMYTR+AE+++++ E + + + G K + I G A+ LK E Sbjct: 119 TGGEESALFAADLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIIRIAGDAAFSRLKFE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQHVN Sbjct: 179 SGGHRVQRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVN 238 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A +L A++ ++Q R A + + Sbjct: 239 KTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIK--DMQTRAAQAREASTRRN 296 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 IG G +IR+Y P V D R N+ ++DGD+D+ + A Sbjct: 297 LIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDMDELLSA 343 >gi|77460969|ref|YP_350476.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf0-1] gi|119361582|sp|Q3K6W9|RF1_PSEPF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|77384972|gb|ABA76485.1| peptide chain release factor RF-1 [Pseudomonas fluorescens Pf0-1] Length = 360 Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 107/243 (44%), Positives = 148/243 (60%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE G K I Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N YG LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ +D R+DT Sbjct: 169 EGDNVYGKLKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSA+RITHIPTG VV+CQ+ERSQHKN+A+A L AKL + Q Sbjct: 229 YRSSGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRARAMAWLSAKLN--DQQTA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 I K +G G +IR+Y + V D R N+ S ++L G ++ ++ Sbjct: 287 AAANAIASERKLLVGSGDRSERIRTYNFAQGR-VTDHRVNLTLYSLDEILAGGVEAVIEP 345 Query: 350 TLA 352 LA Sbjct: 346 LLA 348 >gi|118602715|ref|YP_903930.1| peptide chain release factor 1 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166223599|sp|A1AX02|RF1_RUTMC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118567654|gb|ABL02459.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 363 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 172/291 (59%), Gaps = 10/291 (3%) Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE---SLLSGEA-DSNDAYLEVHAG 124 NL +L L EDD I + + +K ++++ E SLL + DS + +E+ AG Sbjct: 61 NLEDAKLMLLEDDMDIKAMAKEEMLDVKKKLDHLYLELKKSLLPKDPNDSRNIIIEIRAG 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG E+ +++ L +MY+R+ EK+K++ E + GE G K I G Y LK E Sbjct: 121 TGGNEASIFSSNLFKMYSRYTEKKKWQIEVISSSLGEHGGFKEIIARISGVGVYSKLKFE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +I + P V++ E+ I+ SD R+DT+RASGAGGQHVN Sbjct: 181 SGAHRVQRVPETESQGRVHTSACTIAIMPEVENIEEVNINMSDVRVDTFRASGAGGQHVN 240 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVRITHIPTG V +CQ RSQHKNKAQA +L ++++ +LQ++E+ + K Sbjct: 241 KTNSAVRITHIPTGTVAECQDGRSQHKNKAQALLVLASRIF--DLQQQEQHKEQASTRKE 298 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IG G ++IR+Y P + D R N+ S++++G+L+ ++ + Sbjct: 299 LIGSGDRSQRIRTYNY-PQGRITDHRINLTLYKLSEIMEGNLNAIIEPLIV 348 >gi|254253376|ref|ZP_04946694.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158] gi|124895985|gb|EAY69865.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158] Length = 360 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 109/272 (40%), Positives = 165/272 (60%), Gaps = 11/272 (4%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 ++ D + R++LE++ + LL + D + +LE+ AG GG ES +A LLRMY R Sbjct: 82 IRSARDRMARLELELQ----KMLLPKDPNDDRNIFLEIRAGTGGDESALFAGDLLRMYLR 137 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE+++++ E + + G K + I G AY LK E G HR+ R+ ++ R H Sbjct: 138 FAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIH 197 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+THIPTG+VV+C Sbjct: 198 TSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIPTGIVVEC 257 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q +RSQHKNK +A +L A++ + Q E+ A + K+ IG G +IR+Y P Sbjct: 258 QDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDRSERIRTYNF-PQ 314 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + D R N+ ++DGDLD+ + A ++ Sbjct: 315 GRMTDHRINLTLYRLEAIMDGDLDELIGALVS 346 >gi|262279542|ref|ZP_06057327.1| peptide chain release factor 1 [Acinetobacter calcoaceticus RUH2202] gi|262259893|gb|EEY78626.1| peptide chain release factor 1 [Acinetobacter calcoaceticus RUH2202] Length = 362 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DSN AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K + Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P +D +EI+ +D RIDT Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341 >gi|299769517|ref|YP_003731543.1| peptide chain release factor 1 [Acinetobacter sp. DR1] gi|298699605|gb|ADI90170.1| peptide chain release factor 1 [Acinetobacter sp. DR1] Length = 362 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DSN AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K + Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P +D +EI+ +D RIDT Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341 >gi|260598215|ref|YP_003210786.1| peptide chain release factor 1 [Cronobacter turicensis z3032] gi|260217392|emb|CBA31449.1| Peptide chain release factor 1 [Cronobacter turicensis z3032] Length = 360 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 149/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +AY+EV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAYVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGEGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L A+++ E KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEAAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + +G G + R+Y P V D R N+ +V++G LD ++ Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIEP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|156933676|ref|YP_001437592.1| peptide chain release factor 1 [Cronobacter sakazakii ATCC BAA-894] gi|166223556|sp|A7MKC1|RF1_ENTS8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|156531930|gb|ABU76756.1| hypothetical protein ESA_01498 [Cronobacter sakazakii ATCC BAA-894] Length = 360 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A++EV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGEGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEVAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + +G G + R+Y P V D R N+ +V++G LD ++ Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIEP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|161870534|ref|YP_001599706.1| peptide chain release factor 1 [Neisseria meningitidis 053442] gi|189039981|sp|A9M1Q8|RF1_NEIM0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|161596087|gb|ABX73747.1| peptide chain release factor I [Neisseria meningitidis 053442] Length = 358 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 VDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|115350468|ref|YP_772307.1| peptide chain release factor 1 [Burkholderia ambifaria AMMD] gi|170703671|ref|ZP_02894403.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10] gi|172059501|ref|YP_001807153.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6] gi|122324144|sp|Q0BIQ0|RF1_BURCM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238689166|sp|B1YSD5|RF1_BURA4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|115280456|gb|ABI85973.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia ambifaria AMMD] gi|170131417|gb|EDT00013.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10] gi|171992018|gb|ACB62937.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6] Length = 360 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 109/259 (42%), Positives = 159/259 (61%), Gaps = 9/259 (3%) Query: 95 IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 ++LE E ++ LL + D + +LE+ AGAGG ES +A LLRMY R+AE+++++ E Sbjct: 90 VRLEAELQKM--LLPKDPNDDRNIFLEIRAGAGGDESALFAGDLLRMYLRFAERQRWQVE 147 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + + G K + I G AY LK E G HR+ R+ ++ R HTS ++ V P Sbjct: 148 MMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMP 207 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK Sbjct: 208 EADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNK 267 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +A +L A++ + Q E+ A + K+ IG G +IR+Y P + D R N+ Sbjct: 268 DRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINL 324 Query: 331 EKTSPSDVLDGDLDDFMKA 349 ++DGDLD+ + A Sbjct: 325 TLYRLEALMDGDLDELIGA 343 >gi|119361546|sp|Q4QKS1|RF1_HAEI8 RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 360 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 152/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE +++ E L ++ E+ G K + + Sbjct: 107 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 167 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ Sbjct: 227 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 286 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|225027777|ref|ZP_03716969.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353] gi|224954923|gb|EEG36132.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353] Length = 359 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 127/351 (36%), Positives = 202/351 (57%), Gaps = 18/351 (5%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +FD ++ V+RL + + +P + + + LM+E+ L + KE ++ + D Sbjct: 1 MFDKLEDLVKRLDEVMQELSEPDVVSDQNRFRNLMKEQNELAPIVEKYKEYKEAKQTIED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAG 124 ++ +LE +E+ +L+E L K VE Y++ +L D ND +E+ AG Sbjct: 61 SVEMLEEEHDEEMRELLKE---ELSEAKKNVEQYEEELKVLLLPKDPNDDKNVIVEIRAG 117 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A + RMY +AE +++KTE +++++ G K + +I G AY LK E Sbjct: 118 AGGDEAALFAAEIYRMYKNYAESKRWKTEFIDVNENGIGGFKEVSFMINGQGAYSRLKYE 177 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ RI +S R HTS ++ + P ++ +++++ +DCR D +RASG GGQ VN Sbjct: 178 SGVHRVQRIPATESGGRIHTSTITVAIMPEAEE-VDVQLDMNDCRFDVFRASGNGGQCVN 236 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+THIPTG+V+ CQ E+SQ KNK +A +LRA+LY+LE K + E K+ Sbjct: 237 TTDSAVRLTHIPTGIVISCQDEKSQLKNKDKAIKVLRARLYDLEQSKAHDAE--AELRKS 294 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IG G +IR+Y P V D R + D+L+GDLD+ + + A Sbjct: 295 QIGTGDRAEKIRTYNF-PQGRVTDHRIKLTLHRLDDILNGDLDEIIDSLTA 344 >gi|68249924|ref|YP_249036.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP] gi|68058123|gb|AAX88376.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP] Length = 361 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 152/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE +++ E L ++ E+ G K + + Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA+A ++L +++ + E ++ Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQER- 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ +V++G +D+ ++ Sbjct: 287 -QAAEQTDMRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQP 344 Query: 350 TL 351 + Sbjct: 345 II 346 >gi|262041834|ref|ZP_06015019.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040826|gb|EEW41912.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 360 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A++EV AG GG E+ +A L RMYTR+AE R+++ E L ++GE G K I Sbjct: 107 DERNAFVEVRAGTGGDEAALFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338 >gi|152970781|ref|YP_001335890.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895295|ref|YP_002920030.1| peptide chain release factor 1 [Klebsiella pneumoniae NTUH-K2044] gi|330009867|ref|ZP_08306623.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3] gi|166223565|sp|A6TAN9|RF1_KLEP7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|150955630|gb|ABR77660.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547612|dbj|BAH63963.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328534693|gb|EGF61258.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3] Length = 360 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A++EV AG GG E+ +A L RMYTR+AE R+++ E L ++GE G K I Sbjct: 107 DERNAFVEVRAGTGGDEAALFAGDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338 >gi|169795523|ref|YP_001713316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE] gi|213158536|ref|YP_002319834.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057] gi|215483010|ref|YP_002325215.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294] gi|332850713|ref|ZP_08432960.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150] gi|332866986|ref|ZP_08437303.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113] gi|226739095|sp|B7H0L9|RF1_ACIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739096|sp|B7IBA1|RF1_ACIB5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238688120|sp|B0V7E0|RF1_ACIBY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169148450|emb|CAM86316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE] gi|213057696|gb|ACJ42598.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057] gi|213989032|gb|ACJ59331.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294] gi|332730550|gb|EGJ61866.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150] gi|332734315|gb|EGJ65443.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113] Length = 362 Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DSN AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K + Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P +D +EI+ +D RIDT Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341 >gi|299144121|ref|ZP_07037201.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518606|gb|EFI42345.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 356 Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 104/243 (42%), Positives = 151/243 (62%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +E+ AGAGG E+ +A +L R Y R+AE+ +K E + ++ G K +I Sbjct: 106 DSKNVIVEIRAGAGGDEAALFAGVLFRQYVRFAERMGWKVEIMSTNEIGIGGYKEVIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +S+ R HTS +++ V P +D +EI+I SD + D Sbjct: 166 LGRGAYSRLKYESGVHRVQRVPETESSGRIHTSTATVAVLPEAED-VEIDIEPSDIKFDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+SQ +NK +A +L+ KLY+L+LQ Sbjct: 225 FRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEKSQLRNKEKAMKILKTKLYDLKLQ-- 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K++IG G +IR+Y P V D R + ++DGDLD+ + A Sbjct: 283 EQNAELSMQKKSQIGTGDRSERIRTYNY-PQGRVTDHRIGLTLHKIDSIVDGDLDEIIDA 341 Query: 350 TLA 352 +A Sbjct: 342 LIA 344 >gi|91785343|ref|YP_560549.1| peptide chain release factor 1 [Burkholderia xenovorans LB400] gi|119361518|sp|Q13TU2|RF1_BURXL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91689297|gb|ABE32497.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia xenovorans LB400] Length = 360 Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+ +++ E + + + G K + I Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAA 343 Query: 350 TLA 352 ++ Sbjct: 344 LVS 346 >gi|296159488|ref|ZP_06842312.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1] gi|295890196|gb|EFG69990.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1] Length = 356 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+ +++ E + + + G K + I Sbjct: 103 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 163 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 223 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 281 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAA 339 Query: 350 TLA 352 ++ Sbjct: 340 LVS 342 >gi|317052432|ref|YP_004113548.1| peptide chain release factor 1 [Desulfurispirillum indicum S5] gi|316947516|gb|ADU66992.1| peptide chain release factor 1 [Desulfurispirillum indicum S5] Length = 355 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 152/238 (63%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + LE+ AG GG E+ +A L RMY+R+A++R +K E L +++ G + +I Sbjct: 106 DTKNIILEIRAGTGGEEAALFATDLFRMYSRYADERGWKVEVLSVNETGNGGFREIISMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S+ R HTS ++ V P ++ ++I+I+ +D RID Sbjct: 166 EGRNVYSRLKFESGTHRVQRVPQTESSGRIHTSAVTVAVLPEAEE-VDIDINPADLRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVR+THIPTGV V CQ+ RSQHKNK +A ++LR++L + +Q+ Sbjct: 225 YRSSGAGGQHVNTTDSAVRVTHIPTGVSVACQEGRSQHKNKEKALSILRSRLLDHAVQQS 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + + K ++G G +IR+Y P V D R N+ VL+GDLD+ + Sbjct: 285 D--SQRSQDRKLQVGSGDRSERIRTYNF-PQGRVTDHRVNLTLHRLEQVLEGDLDEVI 339 >gi|169633250|ref|YP_001706986.1| peptide chain release factor 1 [Acinetobacter baumannii SDF] gi|184158674|ref|YP_001847013.1| peptide chain release factor 1 [Acinetobacter baumannii ACICU] gi|239501457|ref|ZP_04660767.1| peptide chain release factor 1 [Acinetobacter baumannii AB900] gi|260554585|ref|ZP_05826806.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606] gi|332874369|ref|ZP_08442280.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059] gi|238685536|sp|A3M6N7|RF1_ACIBT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238688133|sp|B0VM26|RF1_ACIBS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690970|sp|B2HU82|RF1_ACIBC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169152042|emb|CAP00926.1| peptide chain release factor 1 [Acinetobacter baumannii] gi|183210268|gb|ACC57666.1| Protein chain release factor A [Acinetobacter baumannii ACICU] gi|193077723|gb|ABO12581.2| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978] gi|260411127|gb|EEX04424.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606] gi|322507515|gb|ADX02969.1| prfA [Acinetobacter baumannii 1656-2] gi|323518589|gb|ADX92970.1| peptide chain release factor 1 [Acinetobacter baumannii TCDC-AB0715] gi|332737448|gb|EGJ68364.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059] Length = 362 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DSN AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K + Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P +D +EI+ +D RIDT Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341 >gi|94496666|ref|ZP_01303242.1| peptide chain release factor 1 [Sphingomonas sp. SKA58] gi|94424026|gb|EAT09051.1| peptide chain release factor 1 [Sphingomonas sp. SKA58] Length = 361 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 118/306 (38%), Positives = 178/306 (58%), Gaps = 14/306 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELAL--EEDDCSILQETSDNLQRIKLEVEYK 102 L +E ++ + +E++ RL L LE+ EE D ++ + +Q +K ++ Sbjct: 35 LSKEYAEIEPVAAAARELR-RLRQELAALEMMTGGEEADPAMRDMAQEEMQLLKSQLPAA 93 Query: 103 Q----FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + + L AD+ A LE+ AG GG E+ +A L RMY R+A+ + +K E L + Sbjct: 94 ERALALQLLPRDAADARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADTQGWKMEMLSAN 153 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 E+ G K I G + LK E GVHR+ R+ +S R HTS +++ V P ++ Sbjct: 154 ASEQGGFKEVVASINGAGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPEE- 212 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 ++++I+++D +ID YRASGAGGQHVNTTDSAVRITH+PTG+VV Q ERSQHKNKA+A Sbjct: 213 VDVQIADADLKIDIYRASGAGGQHVNTTDSAVRITHVPTGIVVTQQDERSQHKNKAKAMQ 272 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 +LRA+LYE E ++R + G + K +G G +IR+Y P V D R N+ Sbjct: 273 VLRARLYEAE-RERTQNEQAG-ARKAMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRL 329 Query: 336 SDVLDG 341 ++L+G Sbjct: 330 PEILEG 335 >gi|328952115|ref|YP_004369449.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109] gi|328452439|gb|AEB08268.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109] Length = 357 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 125/337 (37%), Positives = 189/337 (56%), Gaps = 17/337 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ--DRLCDN-LILLELALEEDDC 82 L + +P +N + RE L I ++ Q +R CDN LL+ E D Sbjct: 16 LEARLSEPETIKNQELYQQYAREHAELSPLIQIFRQHQQVERECDNNQALLKT---ETDE 72 Query: 83 SILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDA---YLEVHAGAGGTESQDWANMLL 138 I + + +Q++K +E+ + E L D NDA LE+ AG GG E+ +A L Sbjct: 73 EIKELAREEIQQLKERLEHLENELRFLLLPKDPNDAKNILLEIRAGTGGEEAALFAAELF 132 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+AE+ +K E L + G+K LI G Y LK E GVHR+ R+ +S Sbjct: 133 RMYTRFAEQHGWKVEILSHNPTGIGGLKEIIALISGQQVYSLLKYESGVHRVQRVPTTES 192 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ + P +D ++++IS + RID +R+SG GGQ VNTTDSAVRITH+PTG Sbjct: 193 QGRIHTSAVTVAILPEAED-VDVQISPEELRIDVFRSSGPGGQSVNTTDSAVRITHLPTG 251 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VV CQ E+SQHKNKA+A +L+A+L L+++++E+ + + K+++G G +IR+Y Sbjct: 252 MVVTCQDEKSQHKNKAKALKVLQARL--LDIKQQEQHQKMAQDRKSQVGSGDRSERIRTY 309 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + L+G LD+ + A ++ Sbjct: 310 NF-PQGRVTDHRLGLTLYRLEAFLEGGLDELLDALVS 345 >gi|254671653|emb|CBA09383.1| peptide chain release factor 1 [Neisseria meningitidis alpha153] Length = 372 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 114 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 173 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 174 KEVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 233 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 234 VDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 293 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 294 --DAQKREAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 350 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 351 LAEITDALIA 360 >gi|255993956|ref|ZP_05427091.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989] gi|255993624|gb|EEU03713.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989] Length = 357 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 98/243 (40%), Positives = 159/243 (65%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ + + LLRMY+ +A+ + +KTE +E+++ GIK A +LI Sbjct: 107 DEKNVILEIRAGTGGEEAALFGSDLLRMYSMYADSKNWKTEIIELNETGLNGIKEAVMLI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG A+ LK E GVHR+ R+ +S+ R HTS +++ V P +DD +E++++ +D R+D Sbjct: 167 KGKGAFSRLKYESGVHRVQRVPTTESSGRVHTSAATVAVLPEMDD-VEVDLNPNDVRVDV 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVR+TH PTG+VV CQ E+SQ KNK +A+ +L+++LY L+++ Sbjct: 226 YRSSGNGGQSVNTTDSAVRLTHEPTGIVVTCQDEKSQIKNKDKAFKVLKSRLYNLKME-- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + + K+++G G +IR+Y P V D R + + ++GD+D+ ++ Sbjct: 284 EQNKQLSDERKSQVGSGDRSERIRTYNF-PQGRVSDHRIGLTIYKLDNFMNGDIDEVIEG 342 Query: 350 TLA 352 + Sbjct: 343 LIT 345 >gi|260549389|ref|ZP_05823608.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624] gi|260407498|gb|EEX00972.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624] Length = 362 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DSN AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K + Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P +D +EI+ +D RIDT Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341 >gi|293609440|ref|ZP_06691742.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827892|gb|EFF86255.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325122703|gb|ADY82226.1| peptide chain release factor 1 [Acinetobacter calcoaceticus PHEA-2] Length = 362 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DSN AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K + Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P +D +EI+ +D RIDT Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341 >gi|170696251|ref|ZP_02887383.1| peptide chain release factor 1 [Burkholderia graminis C4D1M] gi|170138811|gb|EDT07007.1| peptide chain release factor 1 [Burkholderia graminis C4D1M] Length = 360 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+ +++ E + + + G K + I Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELISA 343 Query: 350 TLA 352 ++ Sbjct: 344 LVS 346 >gi|288574777|ref|ZP_06393134.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570518|gb|EFC92075.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 358 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 120/329 (36%), Positives = 186/329 (56%), Gaps = 14/329 (4%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K DP + N E + L ++ L + +E + R+ L + L+ DD + Q Sbjct: 20 KMADPSVTSNPKELQSLGKKHAELSEIVEAYEEYK-RIRSELEEAKALLDSDDPEMAQLA 78 Query: 89 SDNLQRIK--LEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTR 143 + + ++ LE + K+ +LL D ND +E+ AG GG E+ +A+ L RMY+R Sbjct: 79 KEEVHSLEPLLEEQEKKV-TLLLLPKDPNDDKSVMVEIRAGTGGDEAALFASDLFRMYSR 137 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE+R++ E L+ ++ E G K + G AY LK E GVHR+ R+ +S R H Sbjct: 138 FAEQRRWSVEILDANETEIGGYKEIVFKVDGQGAYSDLKYESGVHRVQRVPATESGGRIH 197 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ V P ++ ++E+ + D +IDTYR+SGAGGQHVN TDSAVRITH+PTG+VV C Sbjct: 198 TSAATVAVLPEAEE-FDVEVRQEDLKIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVVTC 256 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q ERSQ KN+A+A LR KLY++E +KR++ + K +IG G +IR+Y P Sbjct: 257 QDERSQIKNRARAMAFLRTKLYDMEQRKRQDAE--AQERKGQIGSGDRSERIRTYNF-PQ 313 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + D R + + G + + ++A Sbjct: 314 NRITDHRIGLTLYKLDAAMGGSITELVEA 342 >gi|329296264|ref|ZP_08253600.1| peptide chain release factor 1 [Plautia stali symbiont] Length = 360 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D ++EV AG GG E+ +A L RMY+R+AE R+++ E + +DGE G K I Sbjct: 107 DERPCFIEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWQVEIMSANDGEHGGYKEVIARI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG +K E G HR+ R+ +S R HTS ++ V P + ++ +I+ D +IDT Sbjct: 167 TGDGAYGRMKFESGGHRVQRVPETESQGRIHTSACTVAVMPKLPEAELPDINPGDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +G G +IR+Y P V D R N+ + ++G LD ++ Sbjct: 287 Q--AAEASTRRNLLGSGDSSDRIRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDTLIEP 343 Query: 350 TL 351 + Sbjct: 344 IV 345 >gi|147567|gb|AAA24519.1| peptide chain release factor 1 [Escherichia coli] Length = 360 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTT SA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTGSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|126642199|ref|YP_001085183.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978] Length = 296 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 145/238 (60%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DSN AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K + Sbjct: 41 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRV 100 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P +D +EI+ +D RIDT Sbjct: 101 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 160 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 161 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 220 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 221 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 275 >gi|329897171|ref|ZP_08271911.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088] gi|328921326|gb|EGG28720.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088] Length = 361 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 120/338 (35%), Positives = 183/338 (54%), Gaps = 23/338 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V+R ++ D N + L RE L+ ++ K Q D++ +L L + Sbjct: 13 VERHEEVSALLSDAETISNQERFRELSREYSELEEVVATFKRYQT-AKDDMEAAQLMLLD 71 Query: 80 DDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 DD + + + L K LE+E ++ L DS + +LE+ AG GG E+ ++ Sbjct: 72 DDPDMREMAEEELDAAKEAIEALEIELQRL-LLPKDPKDSANVFLEIRAGTGGDEAAIFS 130 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE+ K++ E L GE G K ++G + Y LK E G HR+ R+ Sbjct: 131 GDLFRMYSRYAERMKWRLEVLSERAGEHGGYKEIITRVEGRDVYAHLKFESGAHRVQRVP 190 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V + IEI+++D R+DT+RASGAGGQHVN TDSA+RITH Sbjct: 191 ETESQGRIHTSACTVAVMAEAAEVDAIEINKADIRVDTFRASGAGGQHVNKTDSAIRITH 250 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKL--------YELELQKREEIANIGESSKTEI 306 +PTG+VV+CQ ERSQHKN+A+A ++L+AKL + Q+R + G+ S Sbjct: 251 LPTGIVVECQDERSQHKNRARAMSLLQAKLDTAAEEKAASEQAQERRNLVGTGDRSD--- 307 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +IR+Y P + D R N+ ++++GDLD Sbjct: 308 ----RIRTYNF-PQGRMTDHRINLTLYKLDEIMEGDLD 340 >gi|325267755|ref|ZP_08134406.1| peptide chain release factor RF1 [Kingella denitrificans ATCC 33394] gi|324980879|gb|EGC16540.1| peptide chain release factor RF1 [Kingella denitrificans ATCC 33394] Length = 358 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 104/243 (42%), Positives = 151/243 (62%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AG GG E+ +A LLRMY+R+AE+ +++TE + ++ + G K + + Sbjct: 107 DDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQTEIVSANESDLGGYKEVIVRL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE+++ D RIDT Sbjct: 167 VGLGAYSKLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NK +A +L A+L ++QKR Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLN--DMQKR 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A K+ IG G +IR+Y P V D R N+ V+DGD+++ A Sbjct: 285 EAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITAA 343 Query: 350 TLA 352 +A Sbjct: 344 LMA 346 >gi|187925494|ref|YP_001897136.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN] gi|238689472|sp|B2SZ27|RF1_BURPP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|187716688|gb|ACD17912.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN] Length = 360 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+ +++ E + + + G K + I Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERNRWQVEMMSASESDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAA 343 Query: 350 TLA 352 ++ Sbjct: 344 LVS 346 >gi|290475215|ref|YP_003468101.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004] gi|289174534|emb|CBJ81328.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004] Length = 360 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 148/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DERNCFLEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +IS D +IDT Sbjct: 167 SGDQVYGHLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPDISPGDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEMHKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E + +G G + R+Y P V D R N+ +V++G LD ++ Sbjct: 287 QEAE--ASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVIEGKLDMLIQP 343 Query: 350 TL 351 + Sbjct: 344 II 345 >gi|254472406|ref|ZP_05085806.1| peptide chain release factor 1 [Pseudovibrio sp. JE062] gi|211958689|gb|EEA93889.1| peptide chain release factor 1 [Pseudovibrio sp. JE062] Length = 357 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 104/224 (46%), Positives = 143/224 (63%), Gaps = 9/224 (4%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 +ADS+D LEV AG GG E+ +A L RMY R+A+ +K E + +G+ G K Sbjct: 104 KADSHDVILEVRAGTGGDEAALFAGDLFRMYQRFADNNGWKVEVMSSSEGDMGGFKEIVA 163 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G +G LK E GVHR+ R+ +S R HTS +++ V P ++ ++++I+ +D RI Sbjct: 164 AVTGQEVFGKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPQAEE-VDVDINPADLRI 222 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYRASGAGGQHVNTTDSAVRITH PTG+VV Q ERSQHKNK +A +LRAK+Y++E Sbjct: 223 DTYRASGAGGQHVNTTDSAVRITHNPTGIVVAVQDERSQHKNKDRAMKLLRAKIYDVE-- 280 Query: 291 KREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 RE AN E+ + ++G G +IR+Y P V D R + Sbjct: 281 -RERAANERTEARRVQVGSGDRSERIRTYNF-PQGRVTDHRIGL 322 >gi|304570793|ref|YP_002516272.2| peptide chain release factor 1 [Caulobacter crescentus NA1000] gi|22096040|sp|Q9A9V5|RF1_CAUCR RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 356 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 119/288 (41%), Positives = 174/288 (60%), Gaps = 15/288 (5%) Query: 74 ELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSG-EADSN-DAYLEVHAGAGGTE 129 EL + D + + D +Q + KL V ++ +L+ + D N A LEV AG GG E Sbjct: 60 ELDVMASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDE 119 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+A+ + ++ E I +GE G K I G +G LK E GVHR Sbjct: 120 AALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHR 179 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P +D +EIEI ESD RIDTYR+SGAGGQHVN TDSA Sbjct: 180 VQRVPATEAQGRIHTSAATVAVLPEAED-VEIEIKESDLRIDTYRSSGAGGQHVNKTDSA 238 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGW 308 VRITH+PTGVVV E+SQH+N+A+A L+A+LY+++ RE + + E+ K+++G Sbjct: 239 VRITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQ---REALDSARSEARKSQVGS 294 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 G +IR+Y P V D R N+ + + +++GD LDD + +A Sbjct: 295 GDRSERIRTYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIA 341 >gi|320538900|ref|ZP_08038576.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson] gi|320031060|gb|EFW13063.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson] Length = 361 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LEV AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DEGGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAETRRWRVEMISANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P V ++ +I++SD +IDT Sbjct: 167 SGEGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEVPEAEMPDITQSDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V+ G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMAGKLD 338 >gi|223043916|ref|ZP_03613957.1| peptide chain release factor 1 [Staphylococcus capitis SK14] gi|222442631|gb|EEE48735.1| peptide chain release factor 1 [Staphylococcus capitis SK14] Length = 358 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 194/346 (56%), Gaps = 15/346 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD D +R LN DP + + + + +E+ L + K ++ L D Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 +L+ ++++ +L+E S +L+ E+E ++ + LL D D +E+ A AG Sbjct: 61 IEEMLKETSDKEEVDMLKEESASLKAELPEME-EELKILLIPKDPNDEKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G +IR+Y P V D R + +++G+LD+ + A Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGNLDEIIDA 340 >gi|42560702|ref|NP_975153.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|61214633|sp|Q6MU89|RF1_MYCMS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|42492198|emb|CAE76795.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320433|gb|ADK69076.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 364 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 116/284 (40%), Positives = 163/284 (57%), Gaps = 17/284 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 L+ELA E L E +D ++ ++ +E E LL + D + +E+ AGG E+ Sbjct: 77 LIELAKIE-----LDENNDKVEHLQQVIE----EMLLPKDPNDDKNVIVEIRGAAGGDEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LLRMY +AE + +K LE GE G +IKG Y LK E G HR+ Sbjct: 128 NIFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRV 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R TS +++ V P + + +EIEI +D RIDTYRASGAGGQHVNTTDSAV Sbjct: 188 QRVPKTEAKGRIQTSTATVAVLPEMSE-VEIEIRSNDLRIDTYRASGAGGQHVNTTDSAV 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q RSQH NK A MLR K+YE E++K++ A + K +G G Sbjct: 247 RITHLPTGIVVTSQDGRSQHDNKDIAMTMLRTKVYEAEVEKQQ--AQADATRKNAVGTGA 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + V++G++D+F+ A + Sbjct: 305 RSEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALI 347 >gi|88800296|ref|ZP_01115863.1| peptide chain release factor 1 [Reinekea sp. MED297] gi|88777011|gb|EAR08219.1| peptide chain release factor 1 [Reinekea sp. MED297] Length = 361 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 144/242 (59%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLEV AG GG E+ ++ L RMY+R+AEK ++ E L +GE G K + Sbjct: 109 DHKNVYLEVRAGTGGDEAAIFSGDLFRMYSRYAEKMGWRVEVLSASEGEHGGYKEIISRL 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ V P D+ IEI ++D R+DT Sbjct: 169 SGERVYSQLKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADELESIEIDKNDLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+R+TH+PTG+VV+CQ ERSQHKNKA+A ++L AKL + Q+ Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHLPTGIVVECQDERSQHKNKARAMSLLAAKLK--DAQES 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + K+ +G G +IR+Y P V D R N+ +V+ G LD ++ Sbjct: 287 AAAREQADQRKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVIGGQLDHIIQP 345 Query: 350 TL 351 L Sbjct: 346 LL 347 >gi|119477466|ref|ZP_01617657.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2143] gi|119449392|gb|EAW30631.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2143] Length = 361 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 102/241 (42%), Positives = 150/241 (62%), Gaps = 12/241 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS++ +LE+ AG GG E+ ++ L RMYTR+AE + +K E + G+ G K + Sbjct: 109 DSHNVFLEIRAGTGGDEAAIFSGDLFRMYTRYAENKGWKIEIISERSGDHGGYKELISRV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS ++ + P VD E+EI++SD RIDT Sbjct: 169 SGQDVYAHLKFESGAHRVQRVPETESQGRVHTSACTVAIMPEVDSVDEVEINKSDLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------E 286 +RASGAGGQHVN TDSA+RITHIP+G+VV+CQ ERSQHKNKA+A ++L+++L + Sbjct: 229 FRASGAGGQHVNKTDSAIRITHIPSGLVVECQDERSQHKNKARAMSLLQSRLLTGIQDKQ 288 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + Q E + +G ++E +IR+Y P V D R N+ ++V++G L D Sbjct: 289 QQEQSDERRSLVGSGDRSE-----RIRTYNY-PQGRVTDHRINLTLYKLAEVMEGALGDV 342 Query: 347 M 347 + Sbjct: 343 I 343 >gi|254674224|emb|CBA10008.1| peptide chain release factor 1 [Neisseria meningitidis alpha275] Length = 358 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 108/243 (44%), Positives = 147/243 (60%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G K I Sbjct: 107 DDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ D RIDT Sbjct: 167 IGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKR Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN--DAQKR 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A K+ IG G +IR+Y P V D R N+ V+DGDL + A Sbjct: 285 EAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDA 343 Query: 350 TLA 352 +A Sbjct: 344 LIA 346 >gi|225568388|ref|ZP_03777413.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM 15053] gi|225162616|gb|EEG75235.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM 15053] Length = 357 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 127/351 (36%), Positives = 199/351 (56%), Gaps = 18/351 (5%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD ++ + R L ++ ++P + N + LM+E+ L + KE + + D Sbjct: 1 MFDKLEDLLIRYEELMSELQEPDVVNNQERFRRLMKEQNDLAPIVEAYKEYKACRQAIED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAG 124 +L++LE +E+ + D L K VE + E +L D ND +E+ AG Sbjct: 61 SLLMLEEESDEEMREL---AKDELNESKARVEELEHELKILLLPKDPNDDKNVMVEIRAG 117 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A + RMY +AE R++KTE + I + G K +I G AY LK E Sbjct: 118 AGGDEAALFAAEIYRMYVHYAEGRRWKTEIISISENGIGGFKEVVFMITGQGAYSRLKYE 177 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS ++ + P ++ +++ I E D RID RASG GGQ VN Sbjct: 178 SGVHRVQRVPETESGGRIHTSTVTVAIMPEAEE-VDVVIDEKDIRIDVMRASGNGGQCVN 236 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLY+LE++K++ A+ E+ ++ Sbjct: 237 TTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLEMEKKQ--ASEAEARRS 294 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IG G +IR+Y P V D R + VL+GDLD+ + + +A Sbjct: 295 QIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSVLNGDLDEVIDSLIA 344 >gi|226946181|ref|YP_002801254.1| peptide chain release factor 1 [Azotobacter vinelandii DJ] gi|259585215|sp|C1DEV0|RF1_AZOVD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226721108|gb|ACO80279.1| peptide chain release factor 1 [Azotobacter vinelandii DJ] Length = 360 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 107/249 (42%), Positives = 154/249 (61%), Gaps = 15/249 (6%) Query: 113 DSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D NDA +LE+ AG GG E+ +A L RMY+R+AEK+ ++ E L + GE G K Sbjct: 106 DPNDARNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAEKQGWRIEILSENPGEHGGYKEII 165 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 ++G N YG LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ ++ R Sbjct: 166 TRVEGDNVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPAELR 225 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +DTYR+SGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A L AK L Sbjct: 226 VDTYRSSGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAK-----L 280 Query: 290 QKREEIA---NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 Q R++ A I E+ + +G G +IR+Y P V + R N+ + +V+ G + Sbjct: 281 QDRQDAAAHREISETRRLLVGSGDRSERIRTYNF-PQGRVTEHRINLTLYALDEVMAGGV 339 Query: 344 DDFMKATLA 352 + ++ L+ Sbjct: 340 EAVIEPLLS 348 >gi|254787712|ref|YP_003075141.1| peptide chain release factor 1 [Teredinibacter turnerae T7901] gi|259585256|sp|C5BSZ6|RF1_TERTT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|237684441|gb|ACR11705.1| peptide chain release factor 1 [Teredinibacter turnerae T7901] Length = 360 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 114/340 (33%), Positives = 189/340 (55%), Gaps = 11/340 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N V+R + DP + + + + L +E L+ + +E + + +N+ ++ Sbjct: 9 LENLVERYDEVGALLGDPDIIADQKKFRDLGKEYSELEPVVICYQEYRT-VIENIAEAKM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131 + + D + + + L+ + ++E Q + LL D + +LE+ AG GG E+ Sbjct: 68 LMNDGDADMREMAQEELKTAEAQLEPLETQLQKLLLPKDPNDEKNVFLEIRAGTGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 ++ L RMY+R+AE+ ++ E + + GE G K + G Y LK E G HR+ Sbjct: 128 IFSGDLFRMYSRYAERAGWRIEIISENAGEHGGYKELITRVVGQGVYSQLKFESGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ + P D+S E+E+++ D RIDT+RASGAGGQHVN TDSA+R Sbjct: 188 RVPETESQGRIHTSACTVAIMPEADESEEVELNKGDLRIDTFRASGAGGQHVNKTDSAIR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV+CQ ERSQHKN+A+A ++L A++ Q + A K+ +G G Sbjct: 248 ITHIPTGIVVECQDERSQHKNRAKAMSLLAARIN--SAQAEQFAAEQASERKSLVGSGDR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++++G LD+ ++ Sbjct: 306 SERIRTYNY-PQGRVTDHRINLTLYKLDEIMEGSLDEVIQ 344 >gi|121603686|ref|YP_981015.1| peptide chain release factor 1 [Polaromonas naphthalenivorans CJ2] gi|166223585|sp|A1VKB6|RF1_POLNA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120592655|gb|ABM36094.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas naphthalenivorans CJ2] Length = 373 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 104/246 (42%), Positives = 148/246 (60%), Gaps = 12/246 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D A++E+ AG GG ES +A L R+YTR+AE+++++ E + E G K L I Sbjct: 111 DRRAAFIEIRAGTGGDESALFAGDLFRLYTRFAERKRWQVEIISESPSELGGYKEVVLRI 170 Query: 173 KGP------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 GP YG L+ E G HR+ R+ ++ R HTS ++ V P D+++ I+I+ + Sbjct: 171 DGPTDAMGVGVYGKLRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDETVAIQINPA 230 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+V +CQ+ RSQH NKAQA +L A+++E Sbjct: 231 DLRIDTYRASGAGGQHINKTDSAVRITHLPTGIVAECQEGRSQHGNKAQAMKVLTARIHE 290 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 E + + A K IG G +IR+Y P + D R N+ +++GDL Sbjct: 291 KE--RSAQAAKDAAMRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLTIMEGDL 347 Query: 344 DDFMKA 349 DD + A Sbjct: 348 DDVVTA 353 >gi|261821677|ref|YP_003259783.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163] gi|261605690|gb|ACX88176.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163] Length = 360 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 148/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERGCFLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEVVSASEGEHGGYKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V V ++ +I+ +D RIDT Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + +G G +IR+Y P V D R N+ +V++G LD ++ Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQP 343 Query: 350 TL 351 + Sbjct: 344 VV 345 >gi|114327270|ref|YP_744427.1| peptide chain release factor 1 [Granulibacter bethesdensis CGDNIH1] gi|119361545|sp|Q0BUJ8|RF1_GRABC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114315444|gb|ABI61504.1| bacterial peptide chain release factor 1 (RF-1) [Granulibacter bethesdensis CGDNIH1] Length = 352 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 115/281 (40%), Positives = 164/281 (58%), Gaps = 17/281 (6%) Query: 77 LEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 L E + IL+E +L R I++ + L EAD A LE+ AGG E+ +A Sbjct: 72 LAESEAEILREKLPSLTREIRIAL-------LPKDEADERSAILEIRPAAGGDEASLFAA 124 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L MY R+AE R ++ E LE D G+K I G + + LK E GVHR+ R+ Sbjct: 125 QLFSMYQRYAEIRGWRFEILEYDDTGLGGLKGGMAEITGRSVFARLKYESGVHRVQRVPA 184 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P +D +++++ E D RID YRASGAGGQHVN T+SAVRITH+ Sbjct: 185 TESQGRIHTSTVTVAVLPEAED-VDVQVDEGDLRIDVYRASGAGGQHVNKTESAVRITHL 243 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGWG---RQ 311 P+G+VV Q+E+SQHKN+A+A +L+A+LYE Q+R + A+ + ++G G + Sbjct: 244 PSGIVVAMQEEKSQHKNRAKAMKILKARLYE---QQRAALHASRAADRRAQVGTGDRSER 300 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P V D R N+ V+ G+LDDF+ A A Sbjct: 301 IRTYNF-PQGRVSDHRINLTLYKIDRVMLGELDDFVDALTA 340 >gi|71909299|ref|YP_286886.1| peptide chain release factor 1 [Dechloromonas aromatica RCB] gi|119361530|sp|Q479R5|RF1_DECAR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71848920|gb|AAZ48416.1| bacterial peptide chain release factor 1 (bRF-1) [Dechloromonas aromatica RCB] Length = 360 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 148/243 (60%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D LE+ AG GG ES +A L RMY+R+AE+++++ E + + E G + I Sbjct: 107 DERSVLLEIRAGTGGDESALFAGSLFRMYSRFAERQRWQVEVMSASESELGGYREIICRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P VD+ ++ ++ +D RIDT Sbjct: 167 AGNGAYSRLKFESGGHRVQRVPETETQGRIHTSACTVAVMPEVDEVEDVNLNPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+V +CQ RSQH NKA A +L A++ ++Q R Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGIVAECQDGRSQHANKASALKVLAARIK--DVQVR 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A+I + K+ IG G +IR+Y P + D R N+ + ++DGD+D+ + A Sbjct: 285 AQQAHISSTRKSLIGSGDRSERIRTYNF-PQGRITDHRINLTLYKIAAIMDGDMDELLGA 343 Query: 350 TLA 352 A Sbjct: 344 LAA 346 >gi|296533064|ref|ZP_06895708.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957] gi|296266608|gb|EFH12589.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957] Length = 351 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 104/244 (42%), Positives = 149/244 (61%), Gaps = 7/244 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ AGG E+ +A L Y ++A R ++ L+ + E GIK A Sbjct: 100 ADAGSAILEIRPAAGGDEAGLFAAELFAAYQKYAAARGWRFGVLDYDESELGGIKGAVAE 159 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 ++G + LK E GVHR+ R+ ++ R HTS ++ V P +D ++++I+ESD RID Sbjct: 160 VEGQGVFARLKFESGVHRVQRVPATETQGRIHTSTVTVAVLPQAED-VDVQINESDLRID 218 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYRASGAGGQHVN TDSAVRITHIPTG VV Q+ERSQHKN+A+A +LRA+LY E Q+ Sbjct: 219 TYRASGAGGQHVNKTDSAVRITHIPTGTVVAMQEERSQHKNRAKAMKVLRARLY--EAQR 276 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + +A+ + ++G G +IR+Y P V D R + V+ G++DD + Sbjct: 277 SQAVASRSADRRAQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHKIDRVMQGEMDDIID 335 Query: 349 ATLA 352 A +A Sbjct: 336 ALIA 339 >gi|332800047|ref|YP_004461546.1| peptide chain release factor 1 [Tepidanaerobacter sp. Re1] gi|332697782|gb|AEE92239.1| Peptide chain release factor 1 [Tepidanaerobacter sp. Re1] Length = 356 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 132/344 (38%), Positives = 189/344 (54%), Gaps = 30/344 (8%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELA------ 76 L K DP + E L +E L+ ++ KE+ +L +N LLE A Sbjct: 15 LTKKIADPEIIARQEEWIGLTKEHASLEEIVTNFREYKEVLKQLEENSELLEDAAGDIEM 74 Query: 77 --LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQ 131 L + + L+E LQ +Q LL + D ND +E+ AG GG E+ Sbjct: 75 EQLIKSELEALEEKKSKLQ--------EQLRILLLPQ-DPNDDRNVIMEIRAGTGGDEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AEK+ +K E ++ + E G K I G AY LK E GVHR+ Sbjct: 126 LFAGDLFRMYSRYAEKQGWKVEIIDSNPTELGGFKEVIFEINGKGAYSRLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + ++IEI+ D RID YRASG GGQ VNTTDSAVR Sbjct: 186 RVPSTEAGGRIHTSAATVAVLPEAHE-VDIEINPDDLRIDIYRASGHGGQGVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV CQ ERSQ KNK +A +LRA+L LE + E+ I ++ ++++G G Sbjct: 245 ITHIPTGLVVTCQDERSQLKNKDKAMKVLRARL--LEKVQEEQEREIAQNRRSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ ++VL G+LD+ + A +A Sbjct: 303 SERIRTYNF-PQGRITDHRINLTTHQLTNVLQGELDELIDALVA 345 >gi|223039191|ref|ZP_03609481.1| peptide chain release factor 1 [Campylobacter rectus RM3267] gi|222879552|gb|EEF14643.1| peptide chain release factor 1 [Campylobacter rectus RM3267] Length = 355 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 122/310 (39%), Positives = 172/310 (55%), Gaps = 22/310 (7%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILLELA----LEEDDCSI 84 DP + ++ L +E+ +L++ S K L D N LL+ A L +D+ Sbjct: 22 DPSITSDIANMTKLSKEQSNLEDIASAAKSYLQTLADIEENKALLDDAELGELAKDELKN 81 Query: 85 LQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L+ +NL+ IK+ + L D + +LE+ AG GG E+ +A L Y R Sbjct: 82 LESQKENLEEEIKILL-------LPKDPNDDKNVFLEIRAGTGGDEAALFAGDLFNAYAR 134 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE R +K E + +G G K LLIKG AY LK E G HR+ R+ +S R H Sbjct: 135 YAELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPETESQGRVH 194 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS ++ + P V+DS EIEI+ +D RID R+SG GGQ VNTTDSAVRITHIPTG+VV Sbjct: 195 TSAVTVAIMPEVEDS-EIEINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVTN 253 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPY 320 Q +SQHKNK A +L+A+LY E+Q+ E +A K+++G G +IR+Y P Sbjct: 254 QDGKSQHKNKEAAMKVLKARLY--EIQEEERVAKETSERKSQVGTGDRSGRIRTYNF-PQ 310 Query: 321 QMVKDLRTNI 330 + D R N+ Sbjct: 311 NRISDHRINL 320 >gi|49473852|ref|YP_031894.1| peptide chain release factor 1 [Bartonella quintana str. Toulouse] gi|61214617|sp|Q6G0R0|RF1_BARQU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|49239355|emb|CAF25688.1| Peptide chain release factor 1 [Bartonella quintana str. Toulouse] Length = 359 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 118/306 (38%), Positives = 180/306 (58%), Gaps = 20/306 (6%) Query: 54 NAISF-IKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 NA+S I E++ + D L +E+ L +++ L + + L+ K+ + LL + Sbjct: 53 NALSIEITELETIISDKLTDVEMRNLAQEELPPLFQKMEKLE--------KELQILLLPK 104 Query: 112 --ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D A +E+ AG GG+E+ + L RMY R+A +K E + +++GE G K Sbjct: 105 DITDEKSAIIEIRAGTGGSEAALFVGDLFRMYERYANAYNWKVEVISLNEGEVGGYKEII 164 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 I G + LK E GVHR+ R+ +++ R HTS +++ V P ++ I+IEI D R Sbjct: 165 ATISGKGVFSKLKFESGVHRVQRVPETETSGRIHTSAATVAVLPEAEE-IDIEIRPEDIR 223 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E Sbjct: 224 IDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIEQ 282 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +K E + S K ++G G +IR+Y P V D R N+ +L+GDLD+ Sbjct: 283 KKAE--SERSASRKNQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDEL 339 Query: 347 MKATLA 352 + A ++ Sbjct: 340 INALIS 345 >gi|119897272|ref|YP_932485.1| peptide chain release factor 1 [Azoarcus sp. BH72] gi|166223529|sp|A1K443|RF1_AZOSB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119669685|emb|CAL93598.1| peptide chain release factor [Azoarcus sp. BH72] Length = 361 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 102/240 (42%), Positives = 149/240 (62%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A LLRMY+R+AE+++++ E + + + G K I Sbjct: 107 DERNLFLEIRAGTGGDEAALFAGDLLRMYSRYAERQRWRVEIVSSNPSDLGGYKEVIARI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ RI ++ R HTS ++ V P D+ +EI+ +D RIDT Sbjct: 167 VGAGAYSRLKFESGGHRVQRIPVTETQGRIHTSACTVAVMPEADELAAVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NKAQA +L A+L + +L+ R Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKAQAMAVLAARLNDAQLRAR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + ++ IG G +IR+Y P V D R N+ V+ G+LD+ + A Sbjct: 287 QSAE--AATRRSLIGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDAVMQGELDELLAA 343 >gi|307731136|ref|YP_003908360.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003] gi|307585671|gb|ADN59069.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003] Length = 360 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+ +++ E + + + G K + I Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIGA 343 Query: 350 TLA 352 ++ Sbjct: 344 LVS 346 >gi|261340150|ref|ZP_05968008.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC 35316] gi|288317665|gb|EFC56603.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC 35316] Length = 360 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 110/272 (40%), Positives = 161/272 (59%), Gaps = 10/272 (3%) Query: 80 DDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 DD + + + LQ K E +Q + LL D +A++EV AG GG E+ +A Sbjct: 70 DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE R+++ E L ++GE G K I G YG LK E G HR+ R+ Sbjct: 130 DLFRMYSRYAEARRWRVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVPA 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+ Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI--- 312 PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQAE--ASTRRNLLGSGDRSDRN 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 R+Y P V D R N+ + ++G LD Sbjct: 308 RTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|300920409|ref|ZP_07136843.1| peptide chain release factor 1 [Escherichia coli MS 115-1] gi|300412542|gb|EFJ95852.1| peptide chain release factor 1 [Escherichia coli MS 115-1] Length = 360 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +G G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRGEIMSASEGGHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|237731780|ref|ZP_04562261.1| peptide chain release factor 1 [Citrobacter sp. 30_2] gi|226907319|gb|EEH93237.1| peptide chain release factor 1 [Citrobacter sp. 30_2] Length = 360 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 109/272 (40%), Positives = 158/272 (58%), Gaps = 10/272 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 DD + + D L+ K + E + Q L D +A+LEV AG GG E+ +A Sbjct: 70 DDPEMREMAQDELREAKEKCEQLEQHLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 130 DLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHRVQRVPA 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+ Sbjct: 190 TESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI--- 312 PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ +R++ + +G G + Sbjct: 250 PTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAE--ASERRNLLGSGDRSDRN 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 R+Y P V D R N+ + ++G LD Sbjct: 308 RTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338 >gi|226952752|ref|ZP_03823216.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244] gi|294650077|ref|ZP_06727461.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC 19194] gi|226836501|gb|EEH68884.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244] gi|292824028|gb|EFF82847.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC 19194] Length = 362 Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 102/238 (42%), Positives = 146/238 (61%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K I Sbjct: 107 DANAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P VD +EI+ +D RIDT Sbjct: 167 DGEGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIP+GVVV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341 >gi|293395774|ref|ZP_06640056.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582] gi|291421711|gb|EFE94958.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582] Length = 361 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 145/235 (61%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LEV AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DERSCFLEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWRVEVMSANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P V ++ EI+ D +IDT Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 338 >gi|241890031|ref|ZP_04777329.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379] gi|241863653|gb|EER68037.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379] Length = 362 Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 126/339 (37%), Positives = 195/339 (57%), Gaps = 17/339 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLM---RERQHLDNAISFIKEIQD---RLCDNLILLE 74 +R LN DP + V + K LM +E++ ++ ++ +E +D ++ D LLE Sbjct: 12 ERYEKLNELLSDPDV---VSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKELLE 68 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133 + +++ ++QE L+ +E + LL + D + +EV AGG E+Q + Sbjct: 69 IEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQLF 128 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A LLRMYTR+AE + +K + LE + GIK A +I G + Y +K E G HR+ R+ Sbjct: 129 AGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQRV 188 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S+ R HTS +++ V P ++ IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR+T Sbjct: 189 PTTESSGRIHTSTATVVVLPEAEE-IEIDINENDIRVDTFASSGAGGQSVNTTMSAVRLT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTGVVV Q ERSQ KNK +A +LRA++Y+ Q EE A K+++G G Sbjct: 248 HIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQ--EEQAKFDAERKSKVGTGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + +++G LD+ ++A Sbjct: 306 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEA 343 >gi|300690281|ref|YP_003751276.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07] gi|299077341|emb|CBJ49966.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07] Length = 356 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 104/243 (42%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AGAGG ES +A LLRMYTR+AE+++++ E + + G K + Sbjct: 103 DHRNIFLEIRAGAGGDESALFAGDLLRMYTRYAERQRWQVELVSESASDLGGYKEVIARL 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D +I+I+ +D RIDT Sbjct: 163 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A +L A+L + Q+R Sbjct: 223 FRASGAGGQHINKTDSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 281 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRITDHRINLTLYKIDAIMDGDLDELLGA 339 Query: 350 TLA 352 A Sbjct: 340 LAA 342 >gi|283832855|ref|ZP_06352596.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220] gi|291071455|gb|EFE09564.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220] Length = 360 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 103/237 (43%), Positives = 148/237 (62%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGEGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ +R Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARR 286 Query: 293 EEIANIGESSKTE--IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ E+S+ +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQ----AEASERRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338 >gi|167470794|ref|ZP_02335498.1| peptide chain release factor 1 [Yersinia pestis FV-1] Length = 303 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 90/181 (49%), Positives = 123/181 (67%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K I Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 E 293 + Sbjct: 287 Q 287 >gi|254497857|ref|ZP_05110623.1| peptide chain release factor 1 [Legionella drancourtii LLAP12] gi|254352935|gb|EET11704.1| peptide chain release factor 1 [Legionella drancourtii LLAP12] Length = 351 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 115/285 (40%), Positives = 166/285 (58%), Gaps = 14/285 (4%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHA 123 +NL L+ L DD + D L+ + ++ E Q+ + D + YLEV A Sbjct: 49 NNLASLQEMLAGDDQELATMAEDELEDAQKQIDELDEQLQWHLIPKDPDDERNIYLEVRA 108 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +A L RMY+R+AE + ++ E + GE G K I G Y LK Sbjct: 109 GTGGDEAAIFAGDLYRMYSRYAENQGWQLELISASHGEHGGYKEIIARISGNAVYSQLKF 168 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ V P V++ +I+I+ D RIDTYR+SGAGGQHV Sbjct: 169 ESGAHRVQRVPDTESQGRVHTSACTVAVMPEVEEIDDIQINTDDLRIDTYRSSGAGGQHV 228 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL--QKREEIANIGES 301 N TDSA+RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E QK+E+ ++ Sbjct: 229 NKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEQSKQKKEQ----AQT 284 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 K+ +G G +IR+Y P + D R N+ DV++G+L Sbjct: 285 RKSLVGSGDRSERIRTYNY-PQGRLTDHRINLTIYQLGDVMEGNL 328 >gi|317133626|ref|YP_004092940.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3] gi|315471605|gb|ADU28209.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3] Length = 356 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 118/310 (38%), Positives = 179/310 (57%), Gaps = 12/310 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQ 103 LMRE + L + Q D + EL LE D + ++ L + E E +Q Sbjct: 34 LMREHKQLTPLVEAYHAYQQATADEMEAREL-LENGDADLRALAAEELADARAEKERLEQ 92 Query: 104 FESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 LL D ND +E+ AGAGG E+ +A L RMY+ +AE+R +K E L +++ Sbjct: 93 KLHLLLLPRDPNDEKNVIIEIRAGAGGEEAALFAAELFRMYSMYAERRGWKAETLNMNET 152 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G+K + +++G AY LK E GVHR+ R+ ++ R HTS ++ V P +D +E Sbjct: 153 ELGGMKEISCMVEGEGAYSRLKFESGVHRVQRVPETEAGGRIHTSTVTVAVLPEAED-VE 211 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++I+ D RIDT+R+SGAGGQH+N T+SA+RITH+PTG+VV+CQ ERSQHKN+ +A +L Sbjct: 212 VDIAPEDLRIDTFRSSGAGGQHINKTESAIRITHLPTGLVVECQDERSQHKNRDRAMKVL 271 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 R++L + ++E I + +T++G G +IR+Y P V D R + Sbjct: 272 RSRLLDRAQSAQDE--EIATTRRTQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYHLDA 328 Query: 338 VLDGDLDDFM 347 VL G+LD+ + Sbjct: 329 VLSGNLDEVI 338 >gi|90407674|ref|ZP_01215854.1| peptide chain release factor 1 [Psychromonas sp. CNPT3] gi|90311265|gb|EAS39370.1| peptide chain release factor 1 [Psychromonas sp. CNPT3] Length = 363 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 119/337 (35%), Positives = 186/337 (55%), Gaps = 7/337 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V+R + DP + + + L +E L+ + K Q + ++L ++ LE+ Sbjct: 13 VERYEEVQALLGDPATLADQDKYRKLTKEYSQLEVVVLSFKGYQGAV-EDLESAKMMLED 71 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSND---AYLEVHAGAGGTESQDWAN 135 DD + + + ++ K +E E + D ND Y+E+ AGAGG E+ +A Sbjct: 72 DDPEMQEMAVEEVKEAKATLETLSSELEILLLPKDPNDDRNCYIEIRAGAGGDEAAIFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+++ + +K++ E + + E+ G K I+G AYG +K E G HR+ R+ Sbjct: 132 NLFRMYSKYIDSKKWRLEIMNTNASEQGGYKEVIAKIEGEGAYGIMKFESGGHRVQRVPE 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P V ++ I I+ +D ++DT+RASGAGGQHVN TDSAVR+THI Sbjct: 192 TESQGRIHTSACTVVVMPEVPEAEAIVINPADLKVDTFRASGAGGQHVNKTDSAVRLTHI 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRS 314 PTG VV+CQ +RSQHKN+AQA ++L+A+L + E +K + S G +IR+ Sbjct: 252 PTGTVVECQDQRSQHKNRAQAMSVLQARLQQAEDEKNHAEEQVIRRSLVASGDRSERIRT 311 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y P V D R N+ D+L+G+LD + L Sbjct: 312 YNY-PQGRVSDHRINLTLYCLHDILEGELDALLDPIL 347 >gi|330863233|emb|CBX73359.1| peptide chain release factor 1 [Yersinia enterocolitica W22703] Length = 330 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 89/182 (48%), Positives = 124/182 (68%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +LE+ AG GG E+ +A + RMY+R+AE R++K E + +GE G K + Sbjct: 107 DERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SGDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKR 286 Query: 293 EE 294 ++ Sbjct: 287 QQ 288 >gi|323527482|ref|YP_004229635.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001] gi|323384484|gb|ADX56575.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001] Length = 356 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+ +++ E + + + G K + I Sbjct: 103 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 163 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 223 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQSH 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 281 EQQAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIGA 339 Query: 350 TLA 352 ++ Sbjct: 340 LVS 342 >gi|317491752|ref|ZP_07950187.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920186|gb|EFV41510.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 360 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D YLE+ AG GG E+ +A + RMY+R+AE R++K E + ++GE G K + Sbjct: 107 DERSCYLEIRAGTGGDEAALFAGDMFRMYSRYAESRRWKIEVMSANEGEHGGYKEIIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ D RIDT Sbjct: 167 IGDGAYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEIPEAELPDINPGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + +G G + R+Y P V D R N+ +V++G LD ++ Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIEP 343 Query: 350 TL 351 + Sbjct: 344 IV 345 >gi|309378429|emb|CBX22924.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 358 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 111/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++EV AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QK E A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKHEAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|301060315|ref|ZP_07201178.1| peptide chain release factor 1 [delta proteobacterium NaphS2] gi|300445511|gb|EFK09413.1| peptide chain release factor 1 [delta proteobacterium NaphS2] Length = 358 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 130/351 (37%), Positives = 190/351 (54%), Gaps = 33/351 (9%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLC 67 +FD +R L T P + Q+ + +E L I+ ++E +QD + Sbjct: 2 AMFDKMKETEERYRELETFLGQPEIIQDQKRFQKYAKEHSDLTPIITVLREHQALQDEIA 61 Query: 68 DNLILLE--------LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-- 117 ++ LL+ LA EE ++ +D L+R E+ ++L D ND Sbjct: 62 ESQSLLQDPDPEIKKLAKEE-----IEGLNDRLERTADEL------TVLLLPKDPNDEKN 110 Query: 118 -YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 LE+ AG GG E+ +A L RMY+R+AE R++KTE L + G K +LI+G Sbjct: 111 ILLEIRAGTGGEEAALFAADLFRMYSRYAELRRWKTEILSQNMTGIGGFKEVIVLIEGHR 170 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + LK E GVHR+ R+ ++ R HTS ++ V P ++ +++EI D RID YR+S Sbjct: 171 VFSRLKYESGVHRVQRVPETEAQGRIHTSAVTVAVLPEAEE-VDVEIKPEDLRIDVYRSS 229 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVNTTDSAVRITH+PTG+VV CQ E+SQHKNKA+A +LR+++ +LE + + Sbjct: 230 GHGGQHVNTTDSAVRITHLPTGLVVTCQDEKSQHKNKAKAMKVLRSRMLDLETAHQH--S 287 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 I E KT +G G +IR+Y P V D R + D L GDL+ Sbjct: 288 RISEERKTMVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYKLDDFLQGDLN 337 >gi|167759398|ref|ZP_02431525.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704] gi|167662955|gb|EDS07085.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704] Length = 356 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 125/349 (35%), Positives = 205/349 (58%), Gaps = 14/349 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD ++ + RL + ++ ++P++ + + LM+E+ L + KE + + D Sbjct: 1 MFDKLEDLLIRLEEVLSELQEPNVANDQNRFRKLMKEQNELTPIVEAYKEYKACKQAIED 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126 +L +LE +E+ + +E +D+ R++ E+E++ LL + D + +E+ AGAG Sbjct: 61 SLQMLEEESDEEMRELAKEELNDSKARVE-ELEHELKILLLPKDPNDDKNVIVEIRAGAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A + RMY +AE R++K E +E + G+K+ T +I G AY +K E G Sbjct: 120 GDEAALFAAEIYRMYLHYAESRRWKVELVECEEIGIGGMKNVTFMINGKGAYSVMKYESG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ V P +D ++I+I E D RID RASG GGQ VNTT Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAED-VDIQIDEKDIRIDVMRASGNGGQCVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY++E QKR + E+ K++I Sbjct: 239 DSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDMECQKRHDAE--AEARKSQI 296 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G G +IR+Y P V D R + +++GD+ + + A +A Sbjct: 297 GTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIA 344 >gi|323702617|ref|ZP_08114279.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM 574] gi|323532436|gb|EGB22313.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM 574] Length = 356 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 121/333 (36%), Positives = 194/333 (58%), Gaps = 11/333 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALEEDDC 82 L + DP + + + K L++ L + K+++ L ++ ++LE LE D Sbjct: 15 LEGQISDPEIIADQAKWKQLVKAHADLTEVVDVFRQYKKVRSDLEESKLMLEEKLEPDFR 74 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMY 141 +++ + L + K E+E K LL + D + +E+ G GG E+ +A L RMY Sbjct: 75 EMVELEIEELSKRKEELEQKLKILLLPKDPNDEKNVIVEIRGGTGGEEAALFAGDLFRMY 134 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 +R+AE++ ++TE ++ ++ + G K T +++G AY LK E GVHR+ R+ +S R Sbjct: 135 SRFAERKGWRTEIIDANETDLGGFKEITFVVEGKGAYSTLKFESGVHRVQRVPATESGGR 194 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P ++ ++IEI+ +D RID + ASG GGQ VNTT SAVRITHIPTG+VV Sbjct: 195 IHTSAATVAVLPEAEE-VDIEINPNDIRIDLFCASGPGGQCVNTTQSAVRITHIPTGIVV 253 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 CQ E+SQHKNK +A +LRA+L L+ ++E+ I + K+ +G G +IR+Y Sbjct: 254 SCQDEKSQHKNKDKAMRVLRARL--LDKAQQEQQQAIASTRKSMVGTGDRSERIRTYNF- 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V D R + VL+GDLD+ ++A + Sbjct: 311 PQNRVTDHRIGLTLHRLDQVLEGDLDEIIEALI 343 >gi|254282871|ref|ZP_04957839.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B] gi|219679074|gb|EED35423.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B] Length = 360 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 102/244 (41%), Positives = 148/244 (60%), Gaps = 16/244 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + YLE+ AG GG E+ +A L RMY R++E R ++ E + GE G K I Sbjct: 109 DSQNVYLEIRAGTGGDEAAIFAGDLFRMYQRYSESRGWRIEVISERPGEHGGFKEIISRI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + Y LK E G HR+ R+ +S R HTS ++ + P D +IEI+++D R+DT Sbjct: 169 QGDDIYAHLKFESGAHRVQRVPETESQGRIHTSACTVAILPEPDAVEDIEINKADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-------- 284 +R+SGAGGQHVNTTDSAVRITH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL Sbjct: 229 FRSSGAGGQHVNTTDSAVRITHLPSGIVVECQDERSQHKNRARAMSLLQAKLASASEQQA 288 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + ++R + G+ S +IR+Y P V D R N+ +V++GDLD Sbjct: 289 AAEQAEERRNLVGTGDRSD-------RIRTYNF-PQGRVSDHRINLTLYKLDEVIEGDLD 340 Query: 345 DFMK 348 ++ Sbjct: 341 ALIQ 344 >gi|205352556|ref|YP_002226357.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690491|sp|B5R924|RF1_SALG2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|205272337|emb|CAR37217.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627616|gb|EGE33959.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 360 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|188587462|ref|YP_001919007.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus JW/NM-WN-LF] gi|229470350|sp|B2A3J0|RF1_NATTJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|179352149|gb|ACB86419.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus JW/NM-WN-LF] Length = 357 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 104/246 (42%), Positives = 157/246 (63%), Gaps = 7/246 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A L RMYTR+AE +KTE ++ H+ + G K +I Sbjct: 107 DEKNVIVEIRAGAGGDEAALFAADLYRMYTRYAEIMNWKTEIMDSHEKDMGGFKEIVFMI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G NAY LK E GVHR+ R+ +S+ R HTS +++ V P +D +EIEI ++ RIDT Sbjct: 167 EGKNAYSRLKFESGVHRVQRVPSTESSGRIHTSTATVAVLPEAED-VEIEIDTNELRIDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + A+G GGQ VNTT SAVRITH PTGVVV CQ E+SQHKN+ +A +LRA++Y++ L+++ Sbjct: 226 FCATGPGGQSVNTTQSAVRITHEPTGVVVSCQDEKSQHKNRDKAMKVLRARIYDMYLEEQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ E K+++G G +IR+Y P + D R N VL+G++D+ + A Sbjct: 286 QQQEA--EERKSQVGSGDRSERIRTYNF-PQGRITDHRINFTTHRLEQVLEGEIDELIDA 342 Query: 350 TLAIKK 355 + ++ Sbjct: 343 LITTEQ 348 >gi|220963008|gb|ACL94364.1| bacterial peptide chain Release factor 1 (RF-1) [Caulobacter crescentus NA1000] Length = 335 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 119/288 (41%), Positives = 174/288 (60%), Gaps = 15/288 (5%) Query: 74 ELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSG-EADSN-DAYLEVHAGAGGTE 129 EL + D + + D +Q + KL V ++ +L+ + D N A LEV AG GG E Sbjct: 39 ELDVMASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDE 98 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+A+ + ++ E I +GE G K I G +G LK E GVHR Sbjct: 99 AALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHR 158 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P +D +EIEI ESD RIDTYR+SGAGGQHVN TDSA Sbjct: 159 VQRVPATEAQGRIHTSAATVAVLPEAED-VEIEIKESDLRIDTYRSSGAGGQHVNKTDSA 217 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGW 308 VRITH+PTGVVV E+SQH+N+A+A L+A+LY+++ RE + + E+ K+++G Sbjct: 218 VRITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQ---REALDSARSEARKSQVGS 273 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 G +IR+Y P V D R N+ + + +++GD LDD + +A Sbjct: 274 GDRSERIRTYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIA 320 >gi|161503112|ref|YP_001570224.1| peptide chain release factor 1 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189039988|sp|A9MPA1|RF1_SALAR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160864459|gb|ABX21082.1| hypothetical protein SARI_01177 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 360 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGEGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|262372379|ref|ZP_06065658.1| peptide chain release factor 1 [Acinetobacter junii SH205] gi|262312404|gb|EEY93489.1| peptide chain release factor 1 [Acinetobacter junii SH205] Length = 362 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 146/238 (61%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K + Sbjct: 107 DANAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P VD +EI+ +D RIDT Sbjct: 167 DGEGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIP+GVVV+CQ+ERSQHKNKA+A +L ++L + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + E + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 287 DAATS--EMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 341 >gi|16125109|ref|NP_419673.1| peptide chain release factor 1 [Caulobacter crescentus CB15] gi|13422113|gb|AAK22841.1| peptide chain release factor 1 [Caulobacter crescentus CB15] Length = 385 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 119/288 (41%), Positives = 174/288 (60%), Gaps = 15/288 (5%) Query: 74 ELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSG-EADSN-DAYLEVHAGAGGTE 129 EL + D + + D +Q + KL V ++ +L+ + D N A LEV AG GG E Sbjct: 89 ELDVMASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDE 148 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+A+ + ++ E I +GE G K I G +G LK E GVHR Sbjct: 149 AALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHR 208 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P +D +EIEI ESD RIDTYR+SGAGGQHVN TDSA Sbjct: 209 VQRVPATEAQGRIHTSAATVAVLPEAED-VEIEIKESDLRIDTYRSSGAGGQHVNKTDSA 267 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGW 308 VRITH+PTGVVV E+SQH+N+A+A L+A+LY+++ RE + + E+ K+++G Sbjct: 268 VRITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQ---REALDSARSEARKSQVGS 323 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 G +IR+Y P V D R N+ + + +++GD LDD + +A Sbjct: 324 GDRSERIRTYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIA 370 >gi|15606216|ref|NP_213594.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5] gi|6225940|sp|O67032|RF1_AQUAE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|2983407|gb|AAC06991.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5] Length = 362 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 109/244 (44%), Positives = 154/244 (63%), Gaps = 9/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + LE+ AGAGG E+ +A L RMY ++AE++ +K L + G K LI Sbjct: 110 DTKNVILEIRAGAGGEEAALFAADLFRMYQKYAEEKGWKVSILSSNKTGLGGYKEVIALI 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S+ R HTS +++ V P VD++ +I+I + +I+T Sbjct: 170 EGEGAYSRLKYESGVHRVQRVPVTESSGRIHTSTATVAVLPEVDET-DIKIKPEELKIET 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 +RASGAGGQ+VNTT++AVRITHIPTG+VVQCQ ERSQ +NK +A +L AKL + E +K Sbjct: 229 FRASGAGGQYVNTTETAVRITHIPTGIVVQCQDERSQFQNKQKALKILYAKLKDYYERKK 288 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +EEIA K ++G G +IR+Y P V D R N+ DVL+G LD+ + Sbjct: 289 QEEIAK---ERKEQVGTGERSEKIRTYNF-PQNRVTDHRINLTLYKLQDVLEGKLDEIID 344 Query: 349 ATLA 352 A A Sbjct: 345 ALRA 348 >gi|314934187|ref|ZP_07841548.1| peptide chain release factor 1 [Staphylococcus caprae C87] gi|313653092|gb|EFS16853.1| peptide chain release factor 1 [Staphylococcus caprae C87] Length = 358 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/346 (35%), Positives = 194/346 (56%), Gaps = 15/346 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD D +R LN DP + + + + +E+ L + K ++ L D Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 +L+ ++++ +L+E S +L+ E+E ++ + LL D D +E+ A AG Sbjct: 61 IEEMLKETSDKEEVDMLKEESASLKAELPEME-EELKILLIPKDPNDEKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G ++R+Y P V D R + +++G+LD+ + A Sbjct: 296 GTGDRSERVRTYNY-PQSRVTDHRIGLTLQKLGQIMEGNLDEIIDA 340 >gi|329119839|ref|ZP_08248513.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC BAA-1200] gi|327463995|gb|EGF10306.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC BAA-1200] Length = 362 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 105/243 (43%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ + G K + + Sbjct: 111 DDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESDLGGYKEVIVRL 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ +D RIDT Sbjct: 171 IGLGAYSKLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKR Sbjct: 231 FRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN--DAQKR 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A K+ IG G +IR+Y P V D R N+ V+DGD+++ A Sbjct: 289 EAQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITAA 347 Query: 350 TLA 352 +A Sbjct: 348 LIA 350 >gi|204927641|ref|ZP_03218842.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322983|gb|EDZ08179.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 360 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|194736546|ref|YP_002114806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238689756|sp|B4TXU2|RF1_SALSV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194712048|gb|ACF91269.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|322616772|gb|EFY13680.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620418|gb|EFY17284.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625680|gb|EFY22499.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626130|gb|EFY22940.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633737|gb|EFY30477.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638891|gb|EFY35584.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640874|gb|EFY37523.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644095|gb|EFY40640.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649166|gb|EFY45604.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655325|gb|EFY51633.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660917|gb|EFY57148.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662786|gb|EFY58993.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667970|gb|EFY64129.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674268|gb|EFY70362.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678549|gb|EFY74607.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683208|gb|EFY79224.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686902|gb|EFY82880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195208|gb|EFZ80388.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200201|gb|EFZ85287.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204529|gb|EFZ89533.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207354|gb|EFZ92302.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213949|gb|EFZ98718.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217339|gb|EGA02058.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219317|gb|EGA03806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228020|gb|EGA12165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231361|gb|EGA15474.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235801|gb|EGA19880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240370|gb|EGA24413.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245262|gb|EGA29262.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323252824|gb|EGA36660.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254893|gb|EGA38687.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261018|gb|EGA44613.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266735|gb|EGA50221.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268942|gb|EGA52398.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 360 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|53717070|ref|YP_105275.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344] gi|67639917|ref|ZP_00438745.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4] gi|121597849|ref|YP_990282.1| peptide chain release factor 1 [Burkholderia mallei SAVP1] gi|124382410|ref|YP_001024781.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229] gi|126447218|ref|YP_001079120.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247] gi|251768001|ref|ZP_04820356.1| peptide chain release factor 1 [Burkholderia mallei PRL-20] gi|254175822|ref|ZP_04882481.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399] gi|254203239|ref|ZP_04909601.1| peptide chain release factor 1 [Burkholderia mallei FMH] gi|254208574|ref|ZP_04914923.1| peptide chain release factor 1 [Burkholderia mallei JHU] gi|254355790|ref|ZP_04972069.1| peptide chain release factor 1 [Burkholderia mallei 2002721280] gi|61214592|sp|Q62DF3|RF1_BURMA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223532|sp|A3MFT4|RF1_BURM7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223533|sp|A2RYL2|RF1_BURM9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223534|sp|A1UWC9|RF1_BURMS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52423040|gb|AAU46610.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344] gi|121225647|gb|ABM49178.1| peptide chain release factor 1 [Burkholderia mallei SAVP1] gi|124290430|gb|ABM99699.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229] gi|126240072|gb|ABO03184.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247] gi|147746284|gb|EDK53362.1| peptide chain release factor 1 [Burkholderia mallei FMH] gi|147751261|gb|EDK58329.1| peptide chain release factor 1 [Burkholderia mallei JHU] gi|148024761|gb|EDK82944.1| peptide chain release factor 1 [Burkholderia mallei 2002721280] gi|160696865|gb|EDP86835.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399] gi|238520529|gb|EEP83988.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4] gi|243061104|gb|EES43290.1| peptide chain release factor 1 [Burkholderia mallei PRL-20] Length = 360 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 19/346 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D RL+ LN ++ ++ + + L RE + + + + D L EL Sbjct: 10 DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69 Query: 77 LEEDDCSI-------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 D S+ L+ D + R+ E+ Q L D + ++E+ AG GG E Sbjct: 70 A---DASMRDFAEDELRGARDRMGRLAAEL---QTMLLPKDPNDERNIFVEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR Sbjct: 124 SALFAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 244 VRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ ++DGDLD+ + A ++ Sbjct: 302 DRSERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346 >gi|302342174|ref|YP_003806703.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075] gi|301638787|gb|ADK84109.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075] Length = 361 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 104/235 (44%), Positives = 145/235 (61%), Gaps = 7/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A LLRMY R+AE +++KTE L H G K LI Sbjct: 111 DEKNVVLEIRAGTGGDEAALFAAELLRMYLRYAELKRWKTEILSQHPTNAGGFKEVIALI 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS ++ V P D+ +E++I + RID Sbjct: 171 TGRGAYSQLKYESGAHRVQRVPATESQGRVHTSAVTVAVLPEADE-VEVDIKPEELRIDY 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQHVNTTDSAVRITH+PTG+VV CQ E+SQHKNKA+A +L A+L LE ++ Sbjct: 230 FRSSGPGGQHVNTTDSAVRITHLPTGLVVSCQDEKSQHKNKAKALKVLAARL--LEKMEQ 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 E+ A + + ++++G G +IR+Y P V D R + +VL G+L+ Sbjct: 288 EQQAALAANRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTIYKLEEVLVGELE 341 >gi|167838055|ref|ZP_02464914.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43] Length = 360 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 19/346 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D RL+ LN ++ ++ + + L RE + + + + D L EL Sbjct: 10 DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69 Query: 77 LEEDDCSI-------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 D S+ L+ D + R+ E+ Q L D + ++E+ AG GG E Sbjct: 70 A---DASMRDFAEDELRGARDRMSRLAAEL---QTMLLPKDPNDERNIFVEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR Sbjct: 124 SALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 244 VRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ ++DGDLD+ + A ++ Sbjct: 302 DRSERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346 >gi|59801687|ref|YP_208399.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA 1090] gi|240017030|ref|ZP_04723570.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA6140] gi|240118391|ref|ZP_04732453.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1] gi|268604103|ref|ZP_06138270.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1] gi|75432438|sp|Q5F750|RF1_NEIG1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|59718582|gb|AAW89987.1| putative peptide chain release factor I [Neisseria gonorrhoeae FA 1090] gi|268588234|gb|EEZ52910.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1] Length = 358 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 110/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R DT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRTDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREVQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|16760669|ref|NP_456286.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765117|ref|NP_460732.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141572|ref|NP_804914.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62180340|ref|YP_216757.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613728|ref|YP_001587693.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168241358|ref|ZP_02666290.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259999|ref|ZP_02681972.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168462748|ref|ZP_02696679.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820514|ref|ZP_02832514.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443280|ref|YP_002041026.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448370|ref|YP_002045819.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471193|ref|ZP_03077177.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197250213|ref|YP_002146253.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|198242115|ref|YP_002215369.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389390|ref|ZP_03216001.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207856717|ref|YP_002243368.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213051786|ref|ZP_03344664.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426495|ref|ZP_03359245.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213617488|ref|ZP_03372314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648795|ref|ZP_03378848.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238913676|ref|ZP_04657513.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289827376|ref|ZP_06545996.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61230201|sp|P0A287|RF1_SALTY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61230203|sp|P0A288|RF1_SALTI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|75482992|sp|Q57NN5|RF1_SALCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039989|sp|A9MW04|RF1_SALPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690045|sp|B5F4H6|RF1_SALA4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690378|sp|B5FU19|RF1_SALDC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690453|sp|B5R3J9|RF1_SALEP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690683|sp|B4TKA4|RF1_SALHS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238693511|sp|B4SUG2|RF1_SALNS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|25299687|pir||AB0720 peptide chain release factor 1 (RF-1) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|154104|gb|AAA88611.1| release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420306|gb|AAL20691.1| peptide chain release factor RF-1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502965|emb|CAD02131.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp. enterica serovar Typhi] gi|29137199|gb|AAO68763.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62127973|gb|AAX65676.1| peptide chain release factor RF-1 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363092|gb|ABX66860.1| hypothetical protein SPAB_01453 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401943|gb|ACF62165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406674|gb|ACF66893.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457557|gb|EDX46396.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195633960|gb|EDX52312.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197213916|gb|ACH51313.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197936631|gb|ACH73964.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199601835|gb|EDZ00381.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205339285|gb|EDZ26049.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342722|gb|EDZ29486.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205351018|gb|EDZ37649.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708520|emb|CAR32841.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246962|emb|CBG24779.1| RF-1 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993724|gb|ACY88609.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158300|emb|CBW17799.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912765|dbj|BAJ36739.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085723|emb|CBY95501.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224404|gb|EFX49467.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322714814|gb|EFZ06385.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130046|gb|ADX17476.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623115|gb|EGE29460.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988663|gb|AEF07646.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 360 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|284007355|emb|CBA72733.1| peptide chain release factor 1 [Arsenophonus nasoniae] Length = 349 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 103/244 (42%), Positives = 150/244 (61%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY R+AE R+++ E + +GE G K + Sbjct: 96 DEKNCFLEIRAGTGGDEAAIFAGDLFRMYNRYAESRRWRIEVMNASEGEHGGYKEIIAKV 155 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E G HR+ R+ +S R HTS ++ + + + +I+ SD RIDT Sbjct: 156 SGDSVYGRLKFESGGHRVQRVPETESQGRIHTSACTVAILAEIPATELPDINPSDLRIDT 215 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR Sbjct: 216 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKALSVLAARIRAAEVQKR 275 Query: 293 EEIANIGESSKTE--IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E E+S+ +G G +IR+Y P + D R N+ +V++G LD + Sbjct: 276 RE----AEASERRNLLGSGDRSDRIRTYNF-PQGRITDHRINLTLYRLDEVIEGKLDMLI 330 Query: 348 KATL 351 + + Sbjct: 331 QPII 334 >gi|325981709|ref|YP_004294111.1| peptide chain release factor 1 [Nitrosomonas sp. AL212] gi|325531228|gb|ADZ25949.1| peptide chain release factor 1 [Nitrosomonas sp. AL212] Length = 359 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 122/356 (34%), Positives = 192/356 (53%), Gaps = 25/356 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS +L+ L L ++A L T + ++E L R QH + + +E Sbjct: 11 RLSVRLDELNHLLSSESATADLDHYRKLTREHAEIVPIVE---LYRSYQHFERDVQTARE 67 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEA-DSNDAYL 119 + L D ET + + KL ++E + + LL + D + +L Sbjct: 68 MHADL--------------DMRAFAETEIQIGKEKLIQIESEIQKQLLPKDPNDERNIFL 113 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ AG GG ES +A L RMY+R+AE+++++ E + E G K I G AY Sbjct: 114 EIRAGTGGDESALFAGNLFRMYSRYAERQRWQVEIISQSLSEIGGYKEIIAKIIGYGAYS 173 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E G HR+ R+ ++ R HTS ++ + P D+ E+ ++ ++ RIDT+RASGAG Sbjct: 174 KLKFESGGHRVQRVPVTETQGRVHTSTCTVAIMPEADEVSEVVLNPAELRIDTFRASGAG 233 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH+N TDSAVR+TH+PTG+VV+CQ RSQHKNKAQA ++L A++++ ++ R + A Sbjct: 234 GQHINKTDSAVRVTHLPTGIVVECQDGRSQHKNKAQALSVLAARIHDKQM--RAQHAEQA 291 Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + K+ +G G +IR+Y P V D R N+ ++DGD+D+ A +A Sbjct: 292 AARKSLVGTGERSERIRTYNF-PQGRVTDHRINLTLYKMDQIMDGDIDELCSALMA 346 >gi|194099102|ref|YP_002002187.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945] gi|239999408|ref|ZP_04719332.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02] gi|240014585|ref|ZP_04721498.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI18] gi|240081334|ref|ZP_04725877.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19] gi|240113543|ref|ZP_04728033.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11] gi|240116107|ref|ZP_04730169.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18] gi|240121107|ref|ZP_04734069.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID24-1] gi|240123936|ref|ZP_04736892.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332] gi|240126136|ref|ZP_04739022.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679] gi|240128613|ref|ZP_04741274.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035] gi|254494127|ref|ZP_05107298.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291] gi|260440083|ref|ZP_05793899.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2] gi|268595228|ref|ZP_06129395.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02] gi|268597436|ref|ZP_06131603.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19] gi|268599608|ref|ZP_06133775.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11] gi|268601773|ref|ZP_06135940.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18] gi|268682561|ref|ZP_06149423.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332] gi|268684722|ref|ZP_06151584.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679] gi|268687001|ref|ZP_06153863.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035] gi|291043371|ref|ZP_06569094.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2] gi|238690206|sp|B4RN52|RF1_NEIG2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|193934392|gb|ACF30216.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945] gi|226513167|gb|EEH62512.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291] gi|268548617|gb|EEZ44035.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02] gi|268551224|gb|EEZ46243.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19] gi|268583739|gb|EEZ48415.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11] gi|268585904|gb|EEZ50580.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18] gi|268622845|gb|EEZ55245.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332] gi|268625006|gb|EEZ57406.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679] gi|268627285|gb|EEZ59685.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035] gi|291012977|gb|EFE04960.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2] gi|317164656|gb|ADV08197.1| peptide chain release factor 1 [Neisseria gonorrhoeae TCDC-NG08107] Length = 358 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 110/250 (44%), Positives = 152/250 (60%), Gaps = 7/250 (2%) Query: 107 LLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + + ++E+ AG GG E+ +A LLRMY+R+AE+ +++ E + ++ E G Sbjct: 100 LLPKDADDDKNIFIEIRAGTGGGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGY 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K I G AY LK E G HR+ R+ +S R HTS ++ V P D+ +IE++ Sbjct: 160 KEVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELNP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R DT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ RSQH NKAQA +L A+L Sbjct: 220 ADLRTDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLN 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + QKRE A K+ IG G +IR+Y P V D R N+ V+DGD Sbjct: 280 --DAQKREVQAKEAAERKSLIGSGDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGD 336 Query: 343 LDDFMKATLA 352 L + A +A Sbjct: 337 LAEITDALIA 346 >gi|213859593|ref|ZP_03385297.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 317 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 64 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 123 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 124 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 183 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR Sbjct: 184 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 243 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 244 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 295 >gi|282850388|ref|ZP_06259767.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745] gi|294792026|ref|ZP_06757174.1| peptide chain release factor 1 [Veillonella sp. 6_1_27] gi|294793891|ref|ZP_06759028.1| peptide chain release factor 1 [Veillonella sp. 3_1_44] gi|282579881|gb|EFB85285.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745] gi|294455461|gb|EFG23833.1| peptide chain release factor 1 [Veillonella sp. 3_1_44] gi|294457256|gb|EFG25618.1| peptide chain release factor 1 [Veillonella sp. 6_1_27] Length = 360 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 188/332 (56%), Gaps = 12/332 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDD 81 L + DP + E + L R+ L + + + L +E+ +++E+ Sbjct: 16 LEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDEAMEVIEDKSMDEEF 75 Query: 82 CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + QE +L+ K E+E K Q L D + +E+ GAGG E+ +A L RM Sbjct: 76 REMAQEELKDLKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAGGDEAALFAGDLFRM 135 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YT++AE + ++ E ++ ++ E G K + G N Y +K E GVHR+ R+ ++ Sbjct: 136 YTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRVQRVPATETQG 195 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V P ++D ++IE++E D +IDTYRASGAGGQH+N T+SAVRITH+P+G+V Sbjct: 196 RVHTSTVTVAVLPEMED-VDIEVNEKDLKIDTYRASGAGGQHINKTESAVRITHLPSGIV 254 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ +RSQ +N+ +A +LRAKL + Q E I+++ K+++G G +IR+Y Sbjct: 255 VACQDQRSQLQNREKAMRVLRAKLQDQAEQ--EAISSMAADRKSQVGTGDRSERIRTYNY 312 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R N+ +L+GDLD+ ++A Sbjct: 313 -PQGRVTDHRINLTLYKLDAILNGDLDEIIQA 343 >gi|54288338|gb|AAV31626.1| predicted protein chain release factor A [uncultured alpha proteobacterium EBAC2C11] Length = 335 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 110/280 (39%), Positives = 163/280 (58%), Gaps = 9/280 (3%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEAD 113 I ++ I+ L D L+++E A E+ D + + L + +L + + +L + D Sbjct: 49 IELVRRIEAELADALLMVEEAGEDADMLEMVQAEAGLLKTRLPEAHSALQIMLLPKDKDD 108 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + +A LEV AG GG E+ +A+ L MY R+A K + E +E+ + G K AT I Sbjct: 109 ARNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHGWNFEVMEVSETGIGGYKEATATIS 168 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G + + LK E GVHR+ R+ ++ R HTS +++ V P +D ++I I ESD R+D + Sbjct: 169 GNDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-VDIRIDESDLRVDVF 227 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASG GGQ VNTTDSAVRITH+PTG+VV Q E+SQHKN+A+A +LRA++Y+ E + E Sbjct: 228 RASGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQHKNRAKAMKILRARIYDAERARVE 287 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 A K ++G G +IR+Y P V D R N Sbjct: 288 --AQRAAERKGQVGSGDRSERIRTYNF-PQGRVTDHRINF 324 >gi|152980137|ref|YP_001351903.1| peptide chain release factor 1 [Janthinobacterium sp. Marseille] gi|166223564|sp|A6SUF6|RF1_JANMA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151280214|gb|ABR88624.1| RF-1 peptide chain release factor [Janthinobacterium sp. Marseille] Length = 360 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/243 (42%), Positives = 149/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A LLRMY+R+AE+ +++ E + E G K + I Sbjct: 107 DDRNIFLEIRAGTGGDEAALFAGDLLRMYSRFAERNRWQIEMVSESASEVGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ + P D+ ++ I+ +D RIDT Sbjct: 167 IGFGAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAIMPEADEVEDVNINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG+VV+CQ +RSQHKNKA A +L A++ +++L R Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--R 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + + K+ IG G +IR+Y P + D R N+ ++DGDL + A Sbjct: 285 EQQSKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNA 343 Query: 350 TLA 352 A Sbjct: 344 LAA 346 >gi|238019080|ref|ZP_04599506.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748] gi|237864335|gb|EEP65625.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748] Length = 360 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 187/332 (56%), Gaps = 12/332 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDD 81 L + DP + E + L R+ L + + + L +E+ +++E+ Sbjct: 16 LEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLAGIDEAMEVIEDKSMDEEF 75 Query: 82 CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + QE L+ K E+E K Q L D + +E+ GAGG E+ +A L RM Sbjct: 76 REMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEAALFAGDLFRM 135 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YT++AE + ++ E ++ ++ E G K + G N Y +K E GVHR+ R+ ++ Sbjct: 136 YTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRVQRVPATETQG 195 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V P ++D ++IE++E D +IDTYRASGAGGQH+N T+SAVRITH+P+G+V Sbjct: 196 RVHTSTVTVAVLPEMED-VDIEVNEKDLKIDTYRASGAGGQHINKTESAVRITHLPSGIV 254 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ +RSQ +N+ +A +LRAKL + Q E I+++ K+++G G +IR+Y Sbjct: 255 VACQDQRSQLQNREKAMRVLRAKLQDQAEQ--EAISSMAADRKSQVGTGDRSERIRTYNY 312 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R N+ +L+GDLD+ ++A Sbjct: 313 -PQGRVTDHRINLTLYKLDAILNGDLDEIIQA 343 >gi|53720682|ref|YP_109668.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243] gi|76809766|ref|YP_334968.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b] gi|126440521|ref|YP_001060595.1| peptide chain release factor 1 [Burkholderia pseudomallei 668] gi|126454756|ref|YP_001067845.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a] gi|134283294|ref|ZP_01769995.1| peptide chain release factor 1 [Burkholderia pseudomallei 305] gi|167721407|ref|ZP_02404643.1| peptide chain release factor 1 [Burkholderia pseudomallei DM98] gi|167740375|ref|ZP_02413149.1| peptide chain release factor 1 [Burkholderia pseudomallei 14] gi|167817592|ref|ZP_02449272.1| peptide chain release factor 1 [Burkholderia pseudomallei 91] gi|167825994|ref|ZP_02457465.1| peptide chain release factor 1 [Burkholderia pseudomallei 9] gi|167847481|ref|ZP_02472989.1| peptide chain release factor 1 [Burkholderia pseudomallei B7210] gi|167896069|ref|ZP_02483471.1| peptide chain release factor 1 [Burkholderia pseudomallei 7894] gi|167904455|ref|ZP_02491660.1| peptide chain release factor 1 [Burkholderia pseudomallei NCTC 13177] gi|167912716|ref|ZP_02499807.1| peptide chain release factor 1 [Burkholderia pseudomallei 112] gi|167920676|ref|ZP_02507767.1| peptide chain release factor 1 [Burkholderia pseudomallei BCC215] gi|217424712|ref|ZP_03456209.1| peptide chain release factor 1 [Burkholderia pseudomallei 576] gi|226198171|ref|ZP_03793742.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan 9] gi|237813980|ref|YP_002898431.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346] gi|242316197|ref|ZP_04815213.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b] gi|254190473|ref|ZP_04896981.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur 52237] gi|254198514|ref|ZP_04904935.1| peptide chain release factor 1 [Burkholderia pseudomallei S13] gi|254260133|ref|ZP_04951187.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a] gi|254300725|ref|ZP_04968170.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e] gi|61214599|sp|Q63QF0|RF1_BURPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361515|sp|Q3JN85|RF1_BURP1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223535|sp|A3NZS4|RF1_BURP0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223536|sp|A3NE24|RF1_BURP6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52211096|emb|CAH37084.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243] gi|76579219|gb|ABA48694.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b] gi|126220014|gb|ABN83520.1| peptide chain release factor 1 [Burkholderia pseudomallei 668] gi|126228398|gb|ABN91938.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a] gi|134245489|gb|EBA45582.1| peptide chain release factor 1 [Burkholderia pseudomallei 305] gi|157810508|gb|EDO87678.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e] gi|157938149|gb|EDO93819.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur 52237] gi|169655254|gb|EDS87947.1| peptide chain release factor 1 [Burkholderia pseudomallei S13] gi|217392168|gb|EEC32193.1| peptide chain release factor 1 [Burkholderia pseudomallei 576] gi|225929691|gb|EEH25707.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan 9] gi|237505256|gb|ACQ97574.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346] gi|242139436|gb|EES25838.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b] gi|254218822|gb|EET08206.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a] Length = 360 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 19/346 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D RL+ LN ++ ++ + + L RE + + + + D L EL Sbjct: 10 DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69 Query: 77 LEEDDCSI-------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 D S+ L+ D + R+ E+ Q L D + ++E+ AG GG E Sbjct: 70 A---DASMRDFAEDELRGARDRMGRLAAEL---QTMLLPKDPNDERNIFVEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR Sbjct: 124 SALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 244 VRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ ++DGDLD+ + A ++ Sbjct: 302 DRSERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346 >gi|269468531|gb|EEZ80185.1| Protein chain release factor A [uncultured SUP05 cluster bacterium] Length = 363 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/243 (42%), Positives = 154/243 (63%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +E+ AG GG E+ ++ L RMY+R+ EK+K++ EA+ + G+ G K I Sbjct: 109 DSRNIIIEIRAGTGGDEASIFSGDLFRMYSRYVEKQKWQMEAMSSNIGDHGGFKEVIARI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y LK E G HR+ R+ +S R HTS ++ + P V++ E++I+ SD RIDT Sbjct: 169 SGTNVYSKLKFESGAHRVQRVPETESQGRVHTSACTVAIMPEVENIEEVDINMSDVRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSAVR+THIPTG VV+CQ RSQHKNKAQA ++L +++ L+ Q++ Sbjct: 229 FRASGAGGQHVNKTDSAVRVTHIPTGTVVECQDGRSQHKNKAQALSVLASRI--LDAQQQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + K IG G ++IR+Y P + D R N+ ++V++GDL+ ++ Sbjct: 287 EQQKEQALTRKELIGSGDRSQRIRTYNY-PQGRITDHRINLTLYKLAEVMEGDLEAIIEP 345 Query: 350 TLA 352 + Sbjct: 346 LIV 348 >gi|255319517|ref|ZP_05360731.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82] gi|262378460|ref|ZP_06071617.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164] gi|255303457|gb|EET82660.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82] gi|262299745|gb|EEY87657.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164] Length = 362 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 100/238 (42%), Positives = 147/238 (61%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N AYLE+ AG GG E+ ++ L RMY+++AE ++ E L ++GE G K + Sbjct: 107 DANAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESCGWRLEILSENEGEHGGYKEIICRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG +K E G HR+ R+ +S R HTS ++ + P VD ++I+ +D RIDT Sbjct: 167 DGDGVYGRMKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A ++L ++L + + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMSLLVSRLENAKRAAQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E + E + +G G +IR+Y P + D R N+ +++GDL++ + Sbjct: 287 E--SATSEMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLNELL 341 >gi|168056816|ref|XP_001780414.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668174|gb|EDQ54787.1| predicted protein [Physcomitrella patens subsp. patens] Length = 362 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 117/290 (40%), Positives = 168/290 (57%), Gaps = 20/290 (6%) Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLL---SGEADSNDAYLEVHAGAG 126 +L+E + E++D Q ++ L+ + LE E Q LL EADS LEV AG G Sbjct: 65 MLIEESAEDEDMK--QAAAEELRSVSNLETEDLQRMLLLMLPKDEADSRGCILEVRAGTG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A+ + RMY R+A+K+ + E L I G K A+ I G YG LK E G Sbjct: 123 GDEASLFASDIFRMYERYAQKKLWSFEVLSITQTNSKGYKEASASITGDGVYGKLKFESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ + + R HTS +S+ V P D+ +++++ D RIDTYRA GAGGQH NTT Sbjct: 183 VHRVQRVPVTEKSGRVHTSAASVAVLPQADE-VDVQMRNEDLRIDTYRAGGAGGQHANTT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE------EIANIGE 300 SAVR+TH+PTG+V+ Q ERSQH N+A++ +LRAKL+E E ++ + IG Sbjct: 242 SSAVRVTHLPTGIVIAIQDERSQHMNRAKSLKLLRAKLFERERMQQAMARSTLRLEQIGS 301 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349 ++E +IR+Y P V D R NI + S ++ G+ LD F+ A Sbjct: 302 GDRSE-----RIRTYNF-PQGRVTDHRVNITQHSIVQIMQGEGLDGFIDA 345 >gi|317495271|ref|ZP_07953641.1| peptide chain release 1 [Gemella moribillum M424] gi|316914693|gb|EFV36169.1| peptide chain release 1 [Gemella moribillum M424] Length = 362 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 128/341 (37%), Positives = 195/341 (57%), Gaps = 21/341 (6%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLM---RERQHLDNAISFIKE---IQDRLCDNLILLE 74 +R LN DP + V + K LM +E++ ++ ++ +E I ++ D LLE Sbjct: 12 ERYEKLNELLSDPDV---VSDTKKLMEYSKEQRSIEKTVAVFREYKNIVQQIADTKELLE 68 Query: 75 LALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131 + +++ ++QE L+ +E E K LL + D + +EV AGG E+Q Sbjct: 69 IEEDKEMKEMMQEEIKELEPSLAPMEEELKIL--LLPKDPNDGKNVVVEVRGAAGGDEAQ 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMYTR+AE + +K + LE + GIK A +I G + Y +K E G HR+ Sbjct: 127 LFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P ++ IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR Sbjct: 187 RVPTTESSGRIHTSTATVVVLPEAEE-IEIDINENDIRVDTFASSGAGGQSVNTTMSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTGVVV Q ERSQ KNK +A +LRA++Y+ Q EE A K+++G G Sbjct: 246 LTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQ--EEQAKFDAERKSKVGTGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + +++G LD+ ++A Sbjct: 304 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEA 343 >gi|238917365|ref|YP_002930882.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750] gi|259585239|sp|C4Z1S4|RF1_EUBE2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238872725|gb|ACR72435.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750] Length = 357 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 127/350 (36%), Positives = 189/350 (54%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ V R + + +P + + + K LM+E+ L I E ++ C I Sbjct: 1 MFDRLEDTVNRYEDITAELGNPDVVNDQEKFKKLMKEQSSLAPLIETYTEYKN--CKKNI 58 Query: 72 LLELAL--EEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGA 125 LA+ EE D + + + L K VE + E L D D +E+ AGA Sbjct: 59 EDSLAILDEETDEELKEMAKEELNESKARVEELEHELKILLLPKDPNDDKDIVVEIRAGA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY +A+ R +K E L + G+K ++KG AY +K E Sbjct: 119 GGEEAALFAAELFRMYVHYAQARGWKVEVLSGDETGIGGMKEVEFMVKGQGAYSIMKYES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ RI +SN R TS +S+ V P ++ ++I I E D RID RASG GGQ VNT Sbjct: 179 GVHRVQRIPVTESNGRIQTSTASVAVMPEAEE-VDIHIDEKDIRIDVMRASGNGGQCVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY++E QK + ++ +++ Sbjct: 238 TDSAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDIETQKAHDAE--ADARRSQ 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IG G +IR+Y P V D R + ++DGD+ D + A +A Sbjct: 296 IGTGDRAEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMDGDIQDIIDACIA 344 >gi|90420193|ref|ZP_01228101.1| peptide chain release factor 1 [Aurantimonas manganoxydans SI85-9A1] gi|90335527|gb|EAS49277.1| peptide chain release factor 1 [Aurantimonas manganoxydans SI85-9A1] Length = 359 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 102/244 (41%), Positives = 153/244 (62%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+AE ++K E + +GE G + Sbjct: 107 ADEKGAILEIRAGTGGSEAGLFAGDLFRMYQRYAEMNRWKVEIISASEGEVGGYREVIAA 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G + LK E GVHR+ R+ +S R HTS +++ V P +D I++E+ D RID Sbjct: 167 IRGVGVFSRLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-IDVEVKTEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+A+A +L+A+L+++E Q+ Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRARAMQVLKARLFDMERQR 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 ++ + K+++G G +IR+Y P V D R N+ V++G++D+ + Sbjct: 285 ADD--ERSAARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGEMDELVD 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALIA 345 >gi|77164037|ref|YP_342562.1| peptide chain release factor 1 [Nitrosococcus oceani ATCC 19707] gi|254436043|ref|ZP_05049550.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27] gi|119361569|sp|Q3JDR4|RF1_NITOC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|76882351|gb|ABA57032.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosococcus oceani ATCC 19707] gi|207089154|gb|EDZ66426.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27] Length = 360 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 110/265 (41%), Positives = 159/265 (60%), Gaps = 14/265 (5%) Query: 96 KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 KLE ++ +LL S D + +LE+ AG GG E+ +A+ LLRMY R+AE+R ++TE Sbjct: 90 KLERLDRELHTLLLPSDPNDKRNIFLEIRAGTGGDEAALFASDLLRMYLRYAEQRGWRTE 149 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + GE G K + I G AY LK E G HR+ R+ +S R HTS ++ + P Sbjct: 150 IMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGHRVQRVPQTESQGRIHTSACTVAIMP 209 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 ++ +I+I+ +D R+DT+RASGAGGQHVN TDSA+RITH+ +G+VV+CQ ERSQHKN+ Sbjct: 210 EAEEIDDIDINPADLRVDTFRASGAGGQHVNKTDSAIRITHLASGIVVECQDERSQHKNR 269 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTE---IGWG---RQIRSYVLQPYQMVKDLR 327 A+A ++LR K L+ EE + E + T IG G +IR+Y P V D R Sbjct: 270 ARAMSLLRTK-----LKSEEEAKLVAEETATRRSLIGSGDRSERIRTYNF-PQGRVTDHR 323 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 N+ ++L G+LD + +A Sbjct: 324 INLTLYKLDEILQGNLDAIIDPLVA 348 >gi|296113010|ref|YP_003626948.1| peptide chain release factor 1 [Moraxella catarrhalis RH4] gi|295920704|gb|ADG61055.1| peptide chain release factor 1 [Moraxella catarrhalis RH4] gi|326560389|gb|EGE10771.1| peptide chain release factor 1 [Moraxella catarrhalis 7169] gi|326561241|gb|EGE11604.1| peptide chain release factor 1 [Moraxella catarrhalis 46P47B1] gi|326564062|gb|EGE14306.1| peptide chain release factor 1 [Moraxella catarrhalis 12P80B1] gi|326565872|gb|EGE16034.1| peptide chain release factor 1 [Moraxella catarrhalis BC1] gi|326570557|gb|EGE20597.1| peptide chain release factor 1 [Moraxella catarrhalis BC8] gi|326573200|gb|EGE23169.1| peptide chain release factor 1 [Moraxella catarrhalis CO72] gi|326576112|gb|EGE26028.1| peptide chain release factor 1 [Moraxella catarrhalis 101P30B1] gi|326577062|gb|EGE26956.1| peptide chain release factor 1 [Moraxella catarrhalis O35E] Length = 359 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 147/245 (60%), Gaps = 9/245 (3%) Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D ND A+LE+ AG GG E+ ++ L RMY ++ + + ++ E L ++GE G K Sbjct: 104 DPNDKATAFLEIRAGTGGDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEII 163 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + G YG LK E G HR+ R+ +S R HTS ++ V P V+ +EI+ SD R Sbjct: 164 ARVSGIGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLR 223 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDTYR+SGAGGQHVNTTDSAVRITHIPTGVV +CQQERSQH NK +A ML A++ + ++ Sbjct: 224 IDTYRSSGAGGQHVNTTDSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKV 283 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 Q +I + + +G G +IR+Y P + D R N+ +++GDL + Sbjct: 284 QA--QIDATSDMRRNLVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTEL 340 Query: 347 MKATL 351 + + L Sbjct: 341 LDSLL 345 >gi|82703754|ref|YP_413320.1| peptide chain release factor 1 [Nitrosospira multiformis ATCC 25196] gi|119361568|sp|Q2Y5P3|RF1_NITMU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|82411819|gb|ABB75928.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosospira multiformis ATCC 25196] Length = 358 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 118/338 (34%), Positives = 187/338 (55%), Gaps = 13/338 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQDRLCDNLILLELAL 77 RL LN + N+ + + L RER + + ++++ QD + E + Sbjct: 15 RLEELNRLLSSESITVNLDQYRKLTRERAEIAPVVDLYNAYLQSEQDIHTAQEMAAEAEM 74 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 E + +++ + L R E++ KQ L D + +LE+ AG GG ES +A L Sbjct: 75 REFADAEIRDAKERLVRYGAELQ-KQL--LPKDPNDERNIFLEIRAGTGGDESALFAADL 131 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY R+AE+++++ E + + G K I G AY LK E G HR+ R+ + Sbjct: 132 FRMYARFAERQRWQVEIISQSPSDVGGYKEIIAKISGEGAYSKLKFESGGHRVQRVPATE 191 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + R HTS ++ V P D+ ++ ++ ++ RIDT+RASGAGGQH+N TDSAVRITH+PT Sbjct: 192 TQGRIHTSACTVAVMPEADEIEDVALNPAELRIDTFRASGAGGQHINKTDSAVRITHLPT 251 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRS 314 G+VV+CQ RSQHKNKAQA ++L A++ + ++Q E+ + + K+ +G G +IR+ Sbjct: 252 GIVVECQDGRSQHKNKAQAMSVLAARIRDKQMQ--EQQSKQAATRKSLVGTGNRSGRIRT 309 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 Y P + D R N+ ++DGDL++ A LA Sbjct: 310 YNF-PQGRITDHRINLTLYKIEQIMDGDLNELCSALLA 346 >gi|315638047|ref|ZP_07893232.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21] gi|315481895|gb|EFU72514.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21] Length = 355 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 122/341 (35%), Positives = 192/341 (56%), Gaps = 15/341 (4%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLILLELA 76 ++R LNT D + ++ + L +E+++L+ + K+ + L DN LL Sbjct: 10 LKRYEELNTLLSDTKIINDIEKMTSLSKEQKNLEPIVLKTKDYFNTLTQIEDNKALLN-- 67 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135 + + + +E NL+ K+ E + LL + D + +LE+ AG GG E+ + Sbjct: 68 -DPEFSELAKEELKNLEEAKINFEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEASLFVG 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L++ Y R+A+ R +K E + +G G K +L+KG AY LK E G HR+ RI Sbjct: 127 DLVKAYARYADLRGYKIEIVSSSEGSAGGFKELIMLVKGTGAYSRLKFESGTHRVQRIPQ 186 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ + P VDD IEI+I+ +D +ID R+SG GGQ VNTTDSAVRITHI Sbjct: 187 TESQGRIHTSAITVAIMPEVDD-IEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHI 245 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+G+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G +I Sbjct: 246 PSGLVVVNQDGKSQHKNKESAMKILKARLY--EMQESERLAKESEARKSQVGSGDRSERI 303 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352 R+Y P + D R N+ +++G L D+ ++ +A Sbjct: 304 RTYNF-PQNRISDHRINLTLYRLDAIMEGGLFDELIEPLIA 343 >gi|116052810|ref|YP_793127.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14] gi|218893762|ref|YP_002442631.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58] gi|254244443|ref|ZP_04937765.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192] gi|296391486|ref|ZP_06880961.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAb1] gi|122257179|sp|Q02G09|RF1_PSEAB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739119|sp|B7V0L1|RF1_PSEA8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|115588031|gb|ABJ14046.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14] gi|126197821|gb|EAZ61884.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192] gi|218773990|emb|CAW29805.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58] Length = 360 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +LE+ AG GG E+ ++ L RMY+R+AE++ ++ E L ++GE G K + Sbjct: 109 DSRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ +D R+DT Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVN TDSAVRITHIP+G+VV+CQ+ERSQHKN+A+A L AKL + + Sbjct: 229 YRSSGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + K +G G +IR+Y P V D R N+ S +V++G ++ ++ Sbjct: 289 QQAIA--STRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEP 345 Query: 350 TL 351 L Sbjct: 346 LL 347 >gi|78065073|ref|YP_367842.1| peptide chain release factor 1 [Burkholderia sp. 383] gi|119361516|sp|Q39K18|RF1_BURS3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|77965818|gb|ABB07198.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia sp. 383] Length = 360 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/243 (42%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+++++ E + + G K + I Sbjct: 107 DERNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELISA 343 Query: 350 TLA 352 ++ Sbjct: 344 LVS 346 >gi|73662075|ref|YP_300856.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|119361617|sp|Q49Z65|RF1_STAS1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|72494590|dbj|BAE17911.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 358 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 124/350 (35%), Positives = 191/350 (54%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD D +R LN DP + N + +E+ L + K+ ++ + + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNNPDNLRKYSKEQAELQKTVDVYRDYKQTKEDISE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +L + D+ +L+E LQ KLE E K F + D D +E+ A AG Sbjct: 61 VEEMLRDTKDNDEIEMLKEEHQTLQNKVPKLEEELK-FLLIPKDPNDDKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+++AE +KT+ +E+ + + G K + + G A+ LK E G Sbjct: 120 GDEAAIFAGDLFRMYSKYAETLNYKTDIVEVTESDHGGYKEISFSVSGNGAFSKLKYENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIE+ D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEVRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTGV+ E+SQ +N+ +A +L+A+L++++LQ EE K+ + Sbjct: 239 DSAVRITHIPTGVIA-TSSEKSQIQNREKALKVLKARLFDMKLQ--EEQQKYAAQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLA 352 G G +IR+Y P V D R + +++G LD+ + A TLA Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLA 344 >gi|326571210|gb|EGE21234.1| peptide chain release factor 1 [Moraxella catarrhalis BC7] Length = 359 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 147/245 (60%), Gaps = 9/245 (3%) Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D ND A+LE+ AG GG E+ ++ L RMY ++ + + ++ E L ++GE G K Sbjct: 104 DPNDKATAFLEIRAGTGGDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEII 163 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + G YG LK E G HR+ R+ +S R HTS ++ V P V+ +EI+ SD R Sbjct: 164 ARVSGIGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLR 223 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDTYR+SGAGGQHVNTTDSAVRITHIPTGVV +CQQERSQH NK +A ML A++ + ++ Sbjct: 224 IDTYRSSGAGGQHVNTTDSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKV 283 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 Q +I + + +G G +IR+Y P + D R N+ +++GDL + Sbjct: 284 QA--QIDATSDMRRNLVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTEL 340 Query: 347 MKATL 351 + + L Sbjct: 341 LDSLL 345 >gi|319781345|ref|YP_004140821.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167233|gb|ADV10771.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 359 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 105/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD +A LE+ AG GG E+ +A L RMY R+A +R ++ E DG+ G K Sbjct: 107 ADDKNAILEIRAGTGGDEAALFAGDLFRMYERYAAERGWRFETASASDGDAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +++ R HTS +++ V P ++ ++I+I D RID Sbjct: 167 VSGKGVFAHLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEE-VDIDIRAEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASG+GGQHVNTTDSAVRITH+PTG++V Q E+SQH+N+A+A +LRA+LY+LE K Sbjct: 226 TMRASGSGGQHVNTTDSAVRITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERGK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +E ES K+++G G +IR+Y P V D R N+ V+ G+LD+ + Sbjct: 285 ADE--ERSESRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEIIN 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALIA 345 >gi|313107327|ref|ZP_07793522.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016] gi|310880024|gb|EFQ38618.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016] Length = 360 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +LE+ AG GG E+ ++ L RMY+R+AE++ ++ E L ++GE G K + Sbjct: 109 DSRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ +D R+DT Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQATIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVN TDSAVRITHIP+G+VV+CQ+ERSQHKN+A+A L AKL + + Sbjct: 229 YRSSGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + K +G G +IR+Y P V D R N+ S +V++G ++ ++ Sbjct: 289 QQAIA--STRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEP 345 Query: 350 TL 351 L Sbjct: 346 LL 347 >gi|258645288|ref|ZP_05732757.1| peptide chain release factor 1 [Dialister invisus DSM 15470] gi|260402638|gb|EEW96185.1| peptide chain release factor 1 [Dialister invisus DSM 15470] Length = 360 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 118/334 (35%), Positives = 185/334 (55%), Gaps = 13/334 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ--DRLCDNLI-LLELALE 78 R L + DP + N + + L +E L ++ + + D+ C + +LE + Sbjct: 12 RFRSLEDQLSDPSVISNQNKWRTLSKEHSDLGEIVTLYRSYKKVDKTCKEAVNILEDKSQ 71 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136 D + +E +++K E++ KQ LL D + LE+ AG GG E+ +A Sbjct: 72 SDLHELAKEELKEAEKMKNELD-KQIHFLLIPKDPNDGKNVILEIRAGTGGEEAALFAAD 130 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LL+MY ++AE + ++ E + ++ + G + T +I G NAY LK E GVHR+ RI Sbjct: 131 LLKMYLKFAENKGWRVELADANETDLGGFREVTCIIYGKNAYSLLKFESGVHRVQRIPAT 190 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS ++ V P V++ ++I+I+ D RID YRASGAGGQH+N T SA+RITHIP Sbjct: 191 ESQGRVHTSAVTVAVLPEVEN-VDIDINRDDLRIDVYRASGAGGQHINKTSSAIRITHIP 249 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 +G+VV CQ ERSQ +NK +A +L+A+LY+ + RE K ++G G +IR Sbjct: 250 SGMVVTCQNERSQRQNKEKALQILKARLYDRAV--RESQDKTAADRKGQVGSGDRSERIR 307 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +Y P V D R N+ + L+G++D + Sbjct: 308 TYNF-PQGRVTDHRVNVSVYQLDNFLNGNMDGIL 340 >gi|292493886|ref|YP_003529325.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4] gi|291582481|gb|ADE16938.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4] Length = 363 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 111/265 (41%), Positives = 160/265 (60%), Gaps = 14/265 (5%) Query: 96 KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 KLE ++ ++LL S D + +LE+ AG GG E+ +A+ LLRMY R+AE+R ++ E Sbjct: 90 KLEQLDQELQTLLLPSDPNDKRNIFLEIRAGIGGDEAALFASDLLRMYLRYAEQRGWRKE 149 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + GE G K + I G AY LK E G HR+ R+ +S R HTS ++ + P Sbjct: 150 IISDSPGEYGGHKEVIIRIVGEGAYSRLKFESGGHRVQRVPQTESQGRIHTSACTVAIMP 209 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 ++ +I+I+ SD RIDT+RASGAGGQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+ Sbjct: 210 EAEEIDDIDINLSDLRIDTFRASGAGGQHVNKTDSAIRITHLPTGIVVECQDERSQHKNR 269 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTE---IGWG---RQIRSYVLQPYQMVKDLR 327 +A ++LRAK L+ +EE E + T +G G +IR+Y P V D R Sbjct: 270 VRAMSLLRAK-----LKSKEETKLAAEEAATRRSLVGSGDRSERIRTYNF-PQGRVTDHR 323 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 N+ ++L+G L+ + +A Sbjct: 324 INLTLYKLDEILEGHLNAVIDPLIA 348 >gi|83720975|ref|YP_443437.1| peptide chain release factor 1 [Burkholderia thailandensis E264] gi|167582488|ref|ZP_02375362.1| peptide chain release factor 1 [Burkholderia thailandensis TXDOH] gi|257137781|ref|ZP_05586043.1| peptide chain release factor 1 [Burkholderia thailandensis E264] gi|119361517|sp|Q2SUG2|RF1_BURTA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83654800|gb|ABC38863.1| peptide chain release factor 1 [Burkholderia thailandensis E264] Length = 360 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 122/344 (35%), Positives = 189/344 (54%), Gaps = 15/344 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D RL+ LN ++ ++ + + L RE + + + + D L EL Sbjct: 10 DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69 Query: 77 LEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQ 131 D S+ D L+ R ++ + +++L + D ND ++E+ AG GG ES Sbjct: 70 A---DASMRDFAEDELRGARERMSRLAAELQTMLLPK-DPNDERNIFVEIRAGTGGDESA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ Sbjct: 126 LFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 246 VTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ ++DGDLD+ + A ++ Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346 >gi|148653259|ref|YP_001280352.1| peptide chain release factor 1 [Psychrobacter sp. PRwf-1] gi|172048528|sp|A5WFG1|RF1_PSYWF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148572343|gb|ABQ94402.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter sp. PRwf-1] Length = 364 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 101/246 (41%), Positives = 151/246 (61%), Gaps = 15/246 (6%) Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D ND A+LE+ AG GG E+ ++ L RMY R+A + + E L ++GE G K Sbjct: 107 DPNDKVPAFLEIRAGTGGDEAAIFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEII 166 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + G + YG LK E G HR+ R+ +S R HTS ++ V P V+ +E++ +D R Sbjct: 167 SRVSGNDVYGRLKFESGAHRVQRVPETESQGRVHTSACTVAVMPEVEIDDTVELNPADIR 226 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +DT+R+SGAGGQHVNTTDSAVR+THIPTGVV +CQQERSQHKN+A+A ML A++ + ++ Sbjct: 227 MDTFRSSGAGGQHVNTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKV 286 Query: 290 QKREEIAN------IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 Q++ + A+ +G ++E +IR+Y P + D R N+ +++GDL Sbjct: 287 QEQVDTADALRRNLVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDL 340 Query: 344 DDFMKA 349 + + A Sbjct: 341 TELLDA 346 >gi|330815385|ref|YP_004359090.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3] gi|327367778|gb|AEA59134.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3] Length = 360 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 105/242 (43%), Positives = 150/242 (61%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+++++ E + + G K + I Sbjct: 107 DERNIFLEIRAGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKERALKVLAARIK--DKQYH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ M A Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLEALMDGDLDE-MIA 342 Query: 350 TL 351 TL Sbjct: 343 TL 344 >gi|269798159|ref|YP_003312059.1| peptide chain release factor 1 [Veillonella parvula DSM 2008] gi|269094788|gb|ACZ24779.1| peptide chain release factor 1 [Veillonella parvula DSM 2008] Length = 360 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 187/332 (56%), Gaps = 12/332 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL----ALEEDD 81 L + DP + E + L R+ L + + + L +E+ +++E+ Sbjct: 16 LEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDEAMEVIEDKSMDEEF 75 Query: 82 CSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + QE L+ K E+E K Q L D + +E+ GAGG E+ +A L RM Sbjct: 76 REMAQEELKELKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAGGDEAALFAGDLFRM 135 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YT++AE + ++ E ++ ++ E G K + G N Y +K E GVHR+ R+ ++ Sbjct: 136 YTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRVQRVPATETQG 195 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V P ++D ++IE++E D +IDTYRASGAGGQH+N T+SAVRITH+P+G+V Sbjct: 196 RVHTSTVTVAVLPEMED-VDIEVNEKDLKIDTYRASGAGGQHINKTESAVRITHLPSGIV 254 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ +RSQ +N+ +A +LRAKL + Q E I+++ K+++G G +IR+Y Sbjct: 255 VACQDQRSQLQNREKAMRVLRAKLQDQAEQ--EAISSMAADRKSQVGTGDRSERIRTYNY 312 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R N+ +L+GDLD+ ++A Sbjct: 313 -PQGRVTDHRINLTLYKLDAILNGDLDEIIQA 343 >gi|326796200|ref|YP_004314020.1| peptide chain release factor 1 [Marinomonas mediterranea MMB-1] gi|326546964|gb|ADZ92184.1| Peptide chain release factor 1 [Marinomonas mediterranea MMB-1] Length = 362 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +LEV AG GG E+ ++ L RMY+R+AE +++K E + ++GE G K I Sbjct: 109 DSKNVFLEVRAGTGGDEASIFSGDLFRMYSRYAETQRWKVEIVSANEGEHGGYKEIIARI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS ++ V P +D+ +I+I+++D RIDT Sbjct: 169 VGEGAYSKLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEMDEVSDIDINKADLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RI H+PTGVVV+CQ ERSQHKN+A+A +L ++L E K Sbjct: 229 FRASGAGGQHVNKTDSAIRIVHLPTGVVVECQDERSQHKNRAKAMALLASRLKAAEEDKA 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + E+ ++ +G G +IR+Y P V D R N+ +++ GDLD Sbjct: 289 AAEQS--ETRRSLVGTGDRSDRIRTYNY-PQGRVTDHRINLTLYKLDEIVAGDLD 340 >gi|206558779|ref|YP_002229539.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315] gi|238693068|sp|B4E6U6|RF1_BURCJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|198034816|emb|CAR50684.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315] Length = 360 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/240 (42%), Positives = 148/240 (61%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+++++ E + + G K + I Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGA 343 >gi|107024140|ref|YP_622467.1| peptide chain release factor 1 [Burkholderia cenocepacia AU 1054] gi|116688534|ref|YP_834157.1| peptide chain release factor 1 [Burkholderia cenocepacia HI2424] gi|170731835|ref|YP_001763782.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3] gi|254246465|ref|ZP_04939786.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184] gi|119361514|sp|Q1BSB1|RF1_BURCA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223531|sp|A0K437|RF1_BURCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238688554|sp|B1JUS4|RF1_BURCC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|105894329|gb|ABF77494.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia cenocepacia AU 1054] gi|116646623|gb|ABK07264.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia cenocepacia HI2424] gi|124871241|gb|EAY62957.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184] gi|169815077|gb|ACA89660.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3] Length = 360 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/240 (42%), Positives = 148/240 (61%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+++++ E + + G K + I Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGA 343 >gi|134294603|ref|YP_001118338.1| peptide chain release factor 1 [Burkholderia vietnamiensis G4] gi|166223537|sp|A4JB50|RF1_BURVG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|134137760|gb|ABO53503.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia vietnamiensis G4] Length = 360 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/243 (42%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+++++ E + + G K + I Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGA 343 Query: 350 TLA 352 ++ Sbjct: 344 LVS 346 >gi|15599860|ref|NP_253354.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAO1] gi|107099668|ref|ZP_01363586.1| hypothetical protein PaerPA_01000686 [Pseudomonas aeruginosa PACS2] gi|12231016|sp|P42806|RF1_PSEAE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|9950920|gb|AAG08052.1|AE004880_8 peptide chain release factor 1 [Pseudomonas aeruginosa PAO1] Length = 360 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +LE+ AG GG E+ ++ L RMY+R+AE++ ++ E L ++GE G K + Sbjct: 109 DSRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRIETLSENEGEHGGYKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ +D R+DT Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVN TDSAVRITHIP+G+VV+CQ+ERSQHKN+A+A L AKL + + Sbjct: 229 YRSSGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + K +G G +IR+Y P V D R N+ S +V++G ++ ++ Sbjct: 289 QQAIA--STRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEP 345 Query: 350 TL 351 L Sbjct: 346 LL 347 >gi|332716892|ref|YP_004444358.1| peptide chain release factor 1 [Agrobacterium sp. H13-3] gi|325063577|gb|ADY67267.1| peptide chain release factor 1 [Agrobacterium sp. H13-3] Length = 360 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 104/244 (42%), Positives = 151/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A + +K E L +GE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASAKGWKVEVLSASEGEAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ +++ R HTS +++ V P +D I++EI D RID Sbjct: 167 ISGRGVFSKLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAED-IDVEIRPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITH+PTG++V E+SQH+N+A+A +LR++LY++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHLPTGLIV-TSSEKSQHQNRAKAMQVLRSRLYDIERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E + K+++G G +IR+Y P V D R N+ +++G++D+ + Sbjct: 285 VE--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMIEGEIDELVD 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALIA 345 >gi|188534015|ref|YP_001907812.1| peptide chain release factor 1 [Erwinia tasmaniensis Et1/99] gi|238689693|sp|B2VEH7|RF1_ERWT9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|188029057|emb|CAO96925.1| Peptide chain release factor 1 (RF-1) [Erwinia tasmaniensis Et1/99] Length = 360 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 12/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLEV AG GG E+ +A L RMY+R+AE R++K E + ++GE G K + Sbjct: 107 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ SD +IDT Sbjct: 167 VGEGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L +++ E+ +R Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARR 286 Query: 293 EEIANIGESSKTE---IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ E S T +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQ-----EESSTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDAL 340 Query: 347 MKATL 351 ++ + Sbjct: 341 IEPIV 345 >gi|157145532|ref|YP_001452851.1| peptide chain release factor 1 [Citrobacter koseri ATCC BAA-895] gi|166223546|sp|A8AG02|RF1_CITK8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157082737|gb|ABV12415.1| hypothetical protein CKO_01275 [Citrobacter koseri ATCC BAA-895] Length = 360 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLD 338 >gi|186477469|ref|YP_001858939.1| peptide chain release factor 1 [Burkholderia phymatum STM815] gi|238691299|sp|B2JHK8|RF1_BURP8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|184193928|gb|ACC71893.1| peptide chain release factor 1 [Burkholderia phymatum STM815] Length = 360 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+ +++ E + + + G K + I Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGEAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ +++GDLD+ + A Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLESIMEGDLDELIAA 343 Query: 350 TLA 352 ++ Sbjct: 344 LVS 346 >gi|254000219|ref|YP_003052282.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4] gi|253986898|gb|ACT51755.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4] Length = 360 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 146/240 (60%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A L RMY+R+AE++++K E + + E G K I Sbjct: 107 DERNIFLEIRAGTGGDESALFAGDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E G HR+ R+ ++ R HTS ++ V P VD+ ++ IS +D RIDT Sbjct: 167 EGFGAYSKLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTISPADIRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH PTG+VV+CQ RSQH NKAQA +L A++ ++ Sbjct: 227 FRASGAGGQHINKTDSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVN-- 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + I ++ IG G +IR+Y P + D R N+ + +GD+D+ + A Sbjct: 285 EQQSKIASERRSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINA 343 >gi|221201722|ref|ZP_03574760.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M] gi|221207203|ref|ZP_03580213.1| peptide chain release factor 1 [Burkholderia multivorans CGD2] gi|221213331|ref|ZP_03586306.1| peptide chain release factor 1 [Burkholderia multivorans CGD1] gi|221166783|gb|EED99254.1| peptide chain release factor 1 [Burkholderia multivorans CGD1] gi|221172791|gb|EEE05228.1| peptide chain release factor 1 [Burkholderia multivorans CGD2] gi|221178538|gb|EEE10947.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M] Length = 360 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 107/261 (40%), Positives = 160/261 (61%), Gaps = 9/261 (3%) Query: 96 KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +LEVE ++ LL + D + ++E+ AG GG ES +A LLRMY R+AE+++++ E Sbjct: 91 RLEVELQKM--LLPKDPNDDRNIFVEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEM 148 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 + + G K + I G AY LK E G HR+ R+ ++ R HTS ++ V P Sbjct: 149 MSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPE 208 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK Sbjct: 209 ADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKD 268 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A +L A++ + Q E+ A + K+ IG G +IR+Y P + D R N+ Sbjct: 269 RALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLT 325 Query: 332 KTSPSDVLDGDLDDFMKATLA 352 ++DGDLD+ + A ++ Sbjct: 326 LYRLEAIMDGDLDELIGALVS 346 >gi|30249865|ref|NP_841935.1| peptide chain release factor 1 [Nitrosomonas europaea ATCC 19718] gi|46576779|sp|Q82TH4|RF1_NITEU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|30180902|emb|CAD85824.1| prfA: peptide chain release factor 1 [Nitrosomonas europaea ATCC 19718] Length = 359 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 148/243 (60%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A L RMY+R+AE+ ++ E + + E G K + I Sbjct: 107 DERNIFLEIRAGTGGDESALFAGDLFRMYSRYAEREGWQVEVVSQNPSEVGGYKEIIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ +I ++ +D RIDT Sbjct: 167 IGHGAYSRLKFESGGHRVQRVPATETQGRVHTSTCTVAVLPEADEIADITLNPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+V +CQ+ RSQHKNKAQA ++L A++ L+ Q R Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGIVAECQEGRSQHKNKAQAMSVLIARI--LDKQVR 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + K+ +G G +IR+Y P + D R N+ ++DG+LD+ A Sbjct: 285 AQQAEQAATRKSLVGSGERSERIRTYNF-PQGRITDHRINLTLYKIEQIIDGELDELCSA 343 Query: 350 TLA 352 A Sbjct: 344 LAA 346 >gi|157736354|ref|YP_001489037.1| peptide chain release factor 1 [Arcobacter butzleri RM4018] gi|315635491|ref|ZP_07890757.1| peptide chain release factor RF1 [Arcobacter butzleri JV22] gi|166977359|sp|A8EQZ4|RF1_ARCB4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157698208|gb|ABV66368.1| peptide chain release factor 1 [Arcobacter butzleri RM4018] gi|315480249|gb|EFU70916.1| peptide chain release factor RF1 [Arcobacter butzleri JV22] Length = 355 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 102/221 (46%), Positives = 139/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L R Y R+AE +K E + D E G K +L+ Sbjct: 104 DDRNIYLELRAGTGGDEAAIFVGDLFRAYLRYAENNGWKVEIMSSSDSESGGYKEIVILV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG + Y LK E G HR+ R+ +S R HTS ++ V P VDD +EIEI+E+D +ID Sbjct: 164 KGDHVYSKLKFEGGTHRVQRVPATESQGRVHTSAITVAVMPEVDD-VEIEINENDLKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVRITHIP+G+VV Q ++SQHKNK +A +L+AKLYE+E++K+ Sbjct: 223 MRASGNGGQSVNTTDSAVRITHIPSGIVVTNQDQKSQHKNKDRALKVLKAKLYEIEMEKK 282 Query: 293 EEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNI 330 E G + K ++G G +IR+Y P + D R N+ Sbjct: 283 MEAE--GATRKEQVGTGDRSGRIRTYNY-PQNRISDHRINL 320 >gi|167620578|ref|ZP_02389209.1| peptide chain release factor 1 [Burkholderia thailandensis Bt4] Length = 360 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 122/344 (35%), Positives = 189/344 (54%), Gaps = 15/344 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D RL+ LN ++ ++ + + L RE + + + + D L EL Sbjct: 10 DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69 Query: 77 LEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQ 131 D S+ D L+ R ++ + +++L + D ND ++E+ AG GG ES Sbjct: 70 A---DASMRDFAEDELRGARERMSRLAAELQTMLLPK-DPNDERNIFVEIRAGTGGDESA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ Sbjct: 126 LFAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR Sbjct: 186 RVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 246 VTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ ++DGDLD+ + A ++ Sbjct: 304 SERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346 >gi|310767482|gb|ADP12432.1| peptide chain release factor 1 [Erwinia sp. Ejp617] Length = 360 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 12/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLEV AG GG E+ +A L RMY+R+AE R++K E + ++GE G K + Sbjct: 107 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ SD +IDT Sbjct: 167 IGEGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L +++ E+ +R Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARR 286 Query: 293 EEIANIGESSKTE---IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ E S T +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQ-----EESSTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDAL 340 Query: 347 MKATL 351 ++ + Sbjct: 341 IEPIV 345 >gi|158321600|ref|YP_001514107.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs] gi|166977358|sp|A8MJX9|RF1_ALKOO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|158141799|gb|ABW20111.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs] Length = 357 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 104/243 (42%), Positives = 146/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGAGG E+ +A L RMYTR+AE +K E + +D G K +I Sbjct: 107 DDKDVIVEIRAGAGGDEAGLFAADLFRMYTRYAENVGWKVEMMSANDTGIGGYKEVIFMI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E GVHR+ RI +S R HTS ++ V P DD ++ E+ +D R+D Sbjct: 167 KGHGAYSRLKYESGVHRVQRIPSTESGGRIHTSTITVAVLPEADD-VDFELDMNDIRVDV 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVR+THIPTG VV CQ E+SQ KNK +A +LRA+L ++ +Q Sbjct: 226 FRSSGNGGQSVNTTDSAVRVTHIPTGTVVSCQDEKSQLKNKEKALKILRARLLDVLIQ-- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A I + K+++G G +IR+Y P + D R N+ L+GD+ + + A Sbjct: 284 EQQAEIAQDRKSQVGTGDRSERIRTYNF-PQGRITDHRINVTLYRLDSFLNGDIQEMIDA 342 Query: 350 TLA 352 + Sbjct: 343 LIT 345 >gi|317048556|ref|YP_004116204.1| peptide chain release factor 1 [Pantoea sp. At-9b] gi|316950173|gb|ADU69648.1| peptide chain release factor 1 [Pantoea sp. At-9b] Length = 360 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 147/242 (60%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D ++EV AG GG E+ +A L RMY+R+AE R+++ E + +DGE G K + Sbjct: 107 DERPCFVEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWQVEIISSNDGEHGGYKEVIARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG K E G HR+ R+ +S R HTS ++ V P + ++ +I+ D +IDT Sbjct: 167 TGDGAYGRFKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPGDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L A+++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + +G G +IR+Y P V D R N+ + ++G LD ++ Sbjct: 287 HEAE--ASTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTIYRLDETMEGKLDSLIEP 343 Query: 350 TL 351 + Sbjct: 344 IV 345 >gi|260881387|ref|ZP_05404264.2| peptide chain release factor 1 [Mitsuokella multacida DSM 20544] gi|260849258|gb|EEX69265.1| peptide chain release factor 1 [Mitsuokella multacida DSM 20544] Length = 360 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 98/242 (40%), Positives = 152/242 (62%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG E+ +A L RMY+R+AEK+ +K E ++ + E G K T ++ Sbjct: 109 DEKNVIVEIRGGVGGEEAALFAGDLFRMYSRYAEKKGWKVELMDANATEIGGFKEVTFMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +LK E G HR+ R+ +S R HTS +++ V P +D +++ I+ +D RIDT Sbjct: 169 TGYGAYSYLKYESGTHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDVAINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQ+VN T++A+RITH+PTG+VVQCQ E+SQ KNK +A +LRA++ L+ ++ Sbjct: 228 YCASGAGGQYVNRTETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARI--LDKARQ 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + ++++G G +IR+Y P V D R + +LDGDLD+ + A Sbjct: 286 EQEAAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHKIDAILDGDLDELLAA 344 Query: 350 TL 351 + Sbjct: 345 LI 346 >gi|292488088|ref|YP_003530965.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430] gi|292899299|ref|YP_003538668.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC 49946] gi|291199147|emb|CBJ46261.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC 49946] gi|291553512|emb|CBA20557.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430] gi|312172219|emb|CBX80476.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC BAA-2158] Length = 360 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 12/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLEV AG GG E+ +A L RMY+R+AE R++K E + ++GE G K + Sbjct: 107 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ SD +IDT Sbjct: 167 IGEGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L +++ E+ +R Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARR 286 Query: 293 EEIANIGESSKTE---IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ E S T +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQ-----EESSTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDAL 340 Query: 347 MKATL 351 ++ + Sbjct: 341 IEPIV 345 >gi|167564255|ref|ZP_02357171.1| peptide chain release factor 1 [Burkholderia oklahomensis EO147] gi|167571406|ref|ZP_02364280.1| peptide chain release factor 1 [Burkholderia oklahomensis C6786] Length = 360 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AG GG ES +A LLRMY R+AE+++++ E + + G K + I Sbjct: 107 DERNIFVEIRAGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGYGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAA 343 Query: 350 TLA 352 ++ Sbjct: 344 LVS 346 >gi|73542728|ref|YP_297248.1| peptide chain release factor 1 [Ralstonia eutropha JMP134] gi|119361585|sp|Q46WS9|RF1_RALEJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|72120141|gb|AAZ62404.1| bacterial peptide chain release factor 1 (bRF-1) [Ralstonia eutropha JMP134] Length = 360 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 127/351 (36%), Positives = 187/351 (53%), Gaps = 21/351 (5%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDN 69 L D +RL +N N+ + + L RE L F ++ QD L Sbjct: 6 LAKLDQLAERLEEVNALLAREDATANIDQYRKLSREHAELSPVAEQYGFYRQAQDDLATA 65 Query: 70 LILLELALEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124 LL DD + +D + R +LE + LL + D ND LE+ AG Sbjct: 66 QALL------DDPEMKDFAADEIASARERLESLEGSLQKLLLPK-DPNDDRNLILEIRAG 118 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG ES +A LLRMYTR+AE+++++ E + + + G K + I G A+ LK E Sbjct: 119 TGGEESALFAGDLLRMYTRFAERQRWQVEIMSESESDLGGYKEVIVRIAGDAAFSRLKFE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ ++ R HTS ++ V P D+ ++EI+ SD RIDT+RASGAGGQHVN Sbjct: 179 SGGHRVQRVPATEAQGRIHTSACTVAVMPEADEVGDVEINPSDLRIDTFRASGAGGQHVN 238 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A +L A++ + ++ R A + + Sbjct: 239 KTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDQQM--RAAQAKEASTRRN 296 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IG G +IR+Y P V D R N+ ++DGDL++ + A A Sbjct: 297 LIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLEELVSALAA 346 >gi|206603661|gb|EDZ40141.1| Peptide chain release factor 1 [Leptospirillum sp. Group II '5-way CG'] Length = 361 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 119/336 (35%), Positives = 184/336 (54%), Gaps = 8/336 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R ++ K DP + +N L R++ L +S + + L EL + D Sbjct: 19 ERYREISGKMADPEVSRNPAIYMKLARDQSELSIIVSLYENYLRIIDQQKDLQELRQDPD 78 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANMLLR 139 ++ + L +VE + +S+L E DS + +LE+ AGAGG E+ +A L R Sbjct: 79 FLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEEAALFARELAR 138 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ E++ F+ E +E +D E G + + ++G A+ LK E GVHR+ R+ ++ Sbjct: 139 MYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHRVQRVPVTEAG 198 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ + P + ++++I D RIDT+ AS AGGQ VNTT SAVRITH+PT + Sbjct: 199 GRIHTSTVTVAMIPEASE-VDVQIDPKDLRIDTFCASSAGGQSVNTTYSAVRITHLPTNI 257 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VV CQ ERSQ KNKA+A +LRA+L E E ++ E I K+++G G +IR+Y Sbjct: 258 VVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNE--QIASDRKSQVGTGDRSERIRTYN 315 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + V++G++D F+ A A Sbjct: 316 F-PQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRA 350 >gi|222823061|ref|YP_002574634.1| peptide chain release factor 1 [Campylobacter lari RM2100] gi|254790870|sp|B9KE98|RF1_CAMLR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|222538282|gb|ACM63383.1| peptide chain release factor 1 [Campylobacter lari RM2100] Length = 355 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 123/332 (37%), Positives = 190/332 (57%), Gaps = 16/332 (4%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLCDNLILLELAL 77 R LNT D ++ ++ + L +E+++L+ A ++K + D + L+L + L Sbjct: 12 RFDELNTLLSDVNISNDISKMTALSKEQKNLEPIVEKAKEYLKTLDDIEENKLLLSDPEL 71 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136 E + +E NL+ +K +E + LL + D + +LE+ AG GG E+ + Sbjct: 72 GE----LAKEELKNLELLKPNLEEELKILLLPKDPNDDKNIFLEIRAGTGGDEASLFVGD 127 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L++ Y R+AE R +K E + +G G K +LIKG AY LK E G HR+ R+ Sbjct: 128 LVKAYIRYAENRDYKYEIVSSSEGSVGGFKEIIILIKGNGAYSRLKYEGGTHRVQRVPET 187 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS ++ + P VDD +EI+I+ +D +ID R+SG GGQ VNTTDSAVRITHIP Sbjct: 188 ESQGRVHTSAITVAIMPEVDD-VEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHIP 246 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV Q +SQHKNK A +L+A+L+ E+Q++E +A E+ K+++G G +IR Sbjct: 247 TGIVVVNQDGKSQHKNKESAMKVLKARLF--EMQEQERLAKESEARKSQVGSGDRSERIR 304 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +Y P + D R N+ +L+G L D Sbjct: 305 TYNF-PQNRISDHRINLTLYRLDAILEGGLFD 335 >gi|171319081|ref|ZP_02908205.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5] gi|171095720|gb|EDT40676.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5] Length = 360 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 103/240 (42%), Positives = 148/240 (61%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+++++ E + + G K + I Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHIPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGA 343 >gi|163815255|ref|ZP_02206632.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759] gi|158449450|gb|EDP26445.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759] Length = 358 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 124/349 (35%), Positives = 204/349 (58%), Gaps = 14/349 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +FD + V +L +N + DP + + + + LM+E+ L + KE +D + D Sbjct: 1 MFDRLEELVDKLDTINNQLTDPDVVTDQNKFRKLMKEQSDLVPIVDKYKEYKDAKTTIED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 +L +LE +E+ + +E N + +LE ++ + LL DS + +E+ AGAG Sbjct: 61 SLEILEEENDEELREMAKEEM-NDAKSRLETIEQELKILLLPKDPNDSKNVIVEIRAGAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A + RMY ++ ++ K+K E + +++ G K A +I G AY +K E G Sbjct: 120 GDEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ RI +S R HTS ++ V P ++ +++EI+++D RID RASG GGQ VNTT Sbjct: 180 VHRVQRIPKTESGGRIHTSTVTVAVMPEAEE-VDVEINDNDIRIDVMRASGNGGQCVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR+KLY++ELQK+ + K++I Sbjct: 239 DSAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAE--AADRKSQI 296 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G G +IR+Y P V D R + +++GDL++ + + +A Sbjct: 297 GTGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIA 344 >gi|91776824|ref|YP_546580.1| peptide chain release factor 1 [Methylobacillus flagellatus KT] gi|119361559|sp|Q1GYE8|RF1_METFK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91710811|gb|ABE50739.1| bacterial peptide chain release factor 1 (bRF-1) [Methylobacillus flagellatus KT] Length = 360 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 117/299 (39%), Positives = 168/299 (56%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSND 116 IKE Q L D + E A EE + + KL+ KQ + LL D + Sbjct: 62 IKEAQAMLADPE-MKEFAQEETEAG----------KQKLDDIEKQLQKLLLPKDPNDERN 110 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +LE+ AG GG ES +A L RMY+R+AE++ +K E + ++ E G K I+G Sbjct: 111 IFLEIRAGTGGDESALFAGDLFRMYSRYAERQGWKVEIVSANESEVGGYKEIIAKIEGFG 170 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 AY LK E G HR+ R+ ++ R HTS ++ V P VD+ ++ I+ +D RIDT+RAS Sbjct: 171 AYSKLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRAS 230 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N TDSAVRITH PTG+VV+CQ RSQH NKAQA +L A++ ++ E+ + Sbjct: 231 GAGGQHINKTDSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVD--EQQS 288 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 I ++ IG G +IR+Y P + D R N+ + +GD+D+ + A A Sbjct: 289 KIASERRSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINALAA 346 >gi|270261428|ref|ZP_06189701.1| peptide chain release factor 1 [Serratia odorifera 4Rx13] gi|270044912|gb|EFA18003.1| peptide chain release factor 1 [Serratia odorifera 4Rx13] Length = 361 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 145/235 (61%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LEV AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DERGIFLEVRAGTGGDEAAIFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P V ++ EI+ D +IDT Sbjct: 167 SGDGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 287 QQ--EEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLD 338 >gi|205355626|ref|ZP_03222396.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CG8421] gi|205346403|gb|EDZ33036.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CG8421] Length = 355 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 139/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AGAGG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DERNIFLEIRAGAGGDEASLFVGDLVKAYARYAENRSYKLEIVSSSEGSVGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ V P VDD IEIEI+ +D ++D Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E +A E+ K+++G G +IR+Y P + D R N+ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320 >gi|56413303|ref|YP_150378.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362228|ref|YP_002141865.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81599266|sp|Q5PCQ9|RF1_SALPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690759|sp|B5BI75|RF1_SALPK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56127560|gb|AAV77066.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093705|emb|CAR59177.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 360 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 147/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDS++RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR Sbjct: 227 FRSSGAGGQHVNTTDSSIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|329766951|ref|ZP_08258479.1| peptide chain release factor 1 [Gemella haemolysans M341] gi|328837676|gb|EGF87301.1| peptide chain release factor 1 [Gemella haemolysans M341] Length = 362 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 194/339 (57%), Gaps = 17/339 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLM---RERQHLDNAISFIKEIQD---RLCDNLILLE 74 +R LN DP + V + K LM +E++ ++ ++ +E +D ++ D LLE Sbjct: 12 ERYEKLNELLSDPDV---VSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKELLE 68 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133 + +++ ++QE L+ +E + LL + D + +EV AGG E+Q + Sbjct: 69 IEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQLF 128 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A LLRMYTR+AE + +K + LE + GIK +I G + Y +K E G HR+ R+ Sbjct: 129 AGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEVIFIISGEDVYSKMKFESGAHRVQRV 188 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S+ R HTS +++ V P ++ IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR+T Sbjct: 189 PTTESSGRIHTSTATVVVLPEAEE-IEIDINENDIRVDTFASSGAGGQSVNTTMSAVRLT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTGVVV Q ERSQ KNK +A +LRA++Y+ Q EE A K+++G G Sbjct: 248 HIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQ--EEQAKFDAERKSKVGTGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + +++G LD+ ++A Sbjct: 306 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEA 343 >gi|313888275|ref|ZP_07821946.1| peptide chain release factor 1 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845678|gb|EFR33068.1| peptide chain release factor 1 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 355 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 103/243 (42%), Positives = 150/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +E+ AGAGG E+ +A +L R Y R+AE+ F+ E + ++ G K +I Sbjct: 106 DSKNVMVEIRAGAGGDEAALFAGVLYRQYVRYAERSGFRVETISSNEIGIGGYKEIVFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +S R HTS +++ V P +D ++IEI + + D Sbjct: 166 IGNGAYSRLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEAED-VDIEIDPTQIKFDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+SQ +NK +A +LR+KLY+L+LQ++ Sbjct: 225 FRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEKSQLRNKEKAMKLLRSKLYDLKLQEQ 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E ++ SS +IG G +IR+Y P V D R N+ + DGDLD+ + A Sbjct: 285 SEKESMERSS--QIGTGDRSERIRTYNY-PQGRVTDHRINLTSHRIDAINDGDLDEIIDA 341 Query: 350 TLA 352 + Sbjct: 342 LIT 344 >gi|27468634|ref|NP_765271.1| peptide chain release factor 1 [Staphylococcus epidermidis ATCC 12228] gi|57867593|ref|YP_189289.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A] gi|251812171|ref|ZP_04826644.1| peptide chain release factor 1 [Staphylococcus epidermidis BCM-HMP0060] gi|282876474|ref|ZP_06285340.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135] gi|293366082|ref|ZP_06612770.1| peptide chain release factor RF1 [Staphylococcus epidermidis M23864:W2(grey)] gi|32171533|sp|Q8CNI7|RF1_STAES RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71153098|sp|Q5HMA4|RF1_STAEQ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|27316181|gb|AAO05315.1|AE016749_261 peptide chain release factor RF-1 [Staphylococcus epidermidis ATCC 12228] gi|57638251|gb|AAW55039.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A] gi|251804268|gb|EES56925.1| peptide chain release factor 1 [Staphylococcus epidermidis BCM-HMP0060] gi|281294726|gb|EFA87254.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135] gi|291319805|gb|EFE60163.1| peptide chain release factor RF1 [Staphylococcus epidermidis M23864:W2(grey)] gi|329726142|gb|EGG62614.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144] gi|329734173|gb|EGG70491.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045] gi|329735695|gb|EGG71978.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028] Length = 358 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 121/346 (34%), Positives = 193/346 (55%), Gaps = 15/346 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD D +R LN DP + + + + +E+ L + K ++ L D Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 +L ++++ +L+E S L+ ++E ++ + LL D D +E+ A AG Sbjct: 61 IEDMLNETSDKEEVEMLKEESSALKTELPDME-EELKILLIPKDPNDDKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P +D +EIEI D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G +IR+Y P V D R + + +++G+LD+ ++A Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLNQIMEGNLDEIVEA 340 >gi|317506166|ref|ZP_07963987.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC BAA-974] gi|316255511|gb|EFV14760.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC BAA-974] Length = 354 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 106/244 (43%), Positives = 148/244 (60%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LEV AGAGG ES +A L+RMYT++AE+R+++ E L I + + G+K AT+ I Sbjct: 101 DGEDVVLEVKAGAGGEESALFAGDLIRMYTKFAERRRWRVEVLSIAESDLGGVKDATISI 160 Query: 173 K--------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K + WLK E GVHR+ R+ +S R HTS + + YP +D+ E+ I Sbjct: 161 KRTGGDQSPAQGVWAWLKHEGGVHRVQRVPATESQGRIHTSAAGVLAYPEPEDAPEVVID 220 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ES+ RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA+A +L A+L Sbjct: 221 ESELRIDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARL 280 Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +L +K A G + + +IR+Y P + D R + ++ VL+GDL Sbjct: 281 EQLREEKAAADAASGRKEQIRTVDRSERIRTYNF-PENRIADHRIGYKASNLDMVLEGDL 339 Query: 344 DDFM 347 + + Sbjct: 340 EPML 343 >gi|86138685|ref|ZP_01057258.1| peptide chain release factor 1 [Roseobacter sp. MED193] gi|85824745|gb|EAQ44947.1| peptide chain release factor 1 [Roseobacter sp. MED193] Length = 361 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 111/256 (43%), Positives = 152/256 (59%), Gaps = 8/256 (3%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 E Q L AD+ A LE+ G GG E+ +A LLRMY R+AE R +K E +E Sbjct: 99 EALQLALLPKDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWKFEVIEEQA 158 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 E GIK IKG N + +K E GVHR+ R+ +S R HTS +++ V P + + Sbjct: 159 TELGGIKEVVAHIKGENVFARMKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAQE-V 217 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +++I SD RIDT RASGAGGQHVNTTDSAVRITHIPTGV+V E+SQH+N+ A + Sbjct: 218 DVQIDPSDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGVMV-VSAEKSQHRNREIAMQV 276 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336 LRA+LY+LE Q+ + + +S+ +G G +IR+Y P + D R N+ Sbjct: 277 LRARLYDLERQRVDSERSADRASQ--VGSGDRSERIRTYNF-PQGRMSDHRINLTLYKLD 333 Query: 337 DVLDGDLDDFMKATLA 352 ++ GDLD+ + A A Sbjct: 334 QIMQGDLDEIIDALTA 349 >gi|113869288|ref|YP_727777.1| peptide chain release factor 1 [Ralstonia eutropha H16] gi|113528064|emb|CAJ94409.1| protein chain release factor A (RF-1) [Ralstonia eutropha H16] Length = 356 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 147/240 (61%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG ES +A LLRMYTR+AE+++++ E + + G K + I Sbjct: 103 DDRNLLLEIRAGTGGEESALFAGDLLRMYTRYAERQRWQVEVMSESASDLGGYKEVIVRI 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A+ LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 163 AGDAAFSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A +L A++ ++Q R Sbjct: 223 FRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIK--DMQTR 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 A + + IG G +IR+Y P V D R N+ ++DGD+D+ + A Sbjct: 281 AAQAKEASTRRNLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDMIMDGDMDELLSA 339 >gi|297180848|gb|ADI17053.1| protein chain release factor a [uncultured alpha proteobacterium HF0010_30A23] Length = 358 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 120/306 (39%), Positives = 176/306 (57%), Gaps = 14/306 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY--K 102 L RE ++ + ++ Q + D LA EDD + D + ++ E++ + Sbjct: 36 LTREYAEMNPIVEEMRAFQKSVQDLEDARALAASEDDADMRAMAEDEARELQAEIDATEQ 95 Query: 103 QFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 + + LL EADS +A LE+ G GG E+ +A LL MY R+AE + +K E LE+ + Sbjct: 96 RMKVLLLPRDEADSRNAILEIRPGTGGDEAGLFAGDLLAMYRRYAELQGWKFEILEMSEN 155 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 + G+K + I G N + LK E GVHR+ R+ +S R HTS +++ V P +D ++ Sbjct: 156 DVGGLKEVSAKINGTNVFAALKFESGVHRVQRVPMTESGGRIHTSAATVAVLPEAED-VD 214 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 IEI D RIDT RASGAGGQHVNTTDSAVRITH+PTG++V Q ++SQH+N+ +A +L Sbjct: 215 IEIKAEDIRIDTMRASGAGGQHVNTTDSAVRITHLPTGIIV-TQSQKSQHRNREEAMRVL 273 Query: 281 RAKLYELELQKREEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336 RA+LYE + REE A + K ++G G +IR+Y P V D R N+ Sbjct: 274 RARLYE---KAREEANAERAANRKGQVGSGDRSERIRTYNY-PQGRVSDHRINLTLHKLD 329 Query: 337 DVLDGD 342 ++ GD Sbjct: 330 RIVAGD 335 >gi|222152015|ref|YP_002561175.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402] gi|254790887|sp|B9E8G1|RF1_MACCJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|222121144|dbj|BAH18479.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402] Length = 358 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 120/345 (34%), Positives = 194/345 (56%), Gaps = 13/345 (3%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD V QR LN DP + + + + +E+ L + KE++ +L + Sbjct: 1 MFDQLEIVEQRYEQLNELLSDPDIVSDTDKLREYSKEQADLQETVEVYREYKEVKQQLEE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 L ++ A + D+ +++E + L+ E+E + L+ + D + +E+ AGG Sbjct: 61 ALEMMGEASDADEQEMIKEEINTLKPQIPELEERMKLLLIPKDPMDDKNVVMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R++E++ +K E +E ++ + G K + +I G AY LK E G Sbjct: 121 DEANIFAGDLFRMYSRFSEEQGWKIEVMETNEADHGGFKEISFIIIGKGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS +++ V P V+D +EIEI + D RI+TYR+SG+GGQHVNTTD Sbjct: 181 HRVQRIPTTESGGRIHTSTATVAVLPEVED-VEIEIRQEDLRIETYRSSGSGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+V E+SQ KN+ +A +L+ ++++ +LQ EE A E K+ +G Sbjct: 240 SAVRITHIPTGIVA-TSSEKSQIKNREKALKLLKTRVFDAKLQ--EEQAKYSEQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P V D R + +++G L + + A Sbjct: 297 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLGEIIDA 340 >gi|153814377|ref|ZP_01967045.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756] gi|317500091|ref|ZP_07958326.1| peptide chain release factor 1 [Lachnospiraceae bacterium 8_1_57FAA] gi|331087685|ref|ZP_08336611.1| peptide chain release factor 1 [Lachnospiraceae bacterium 3_1_46FAA] gi|145848773|gb|EDK25691.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756] gi|316898576|gb|EFV20612.1| peptide chain release factor 1 [Lachnospiraceae bacterium 8_1_57FAA] gi|330409666|gb|EGG89102.1| peptide chain release factor 1 [Lachnospiraceae bacterium 3_1_46FAA] Length = 356 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 120/332 (36%), Positives = 196/332 (59%), Gaps = 17/332 (5%) Query: 31 EDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDCSIL-Q 86 ++P + + + + LM+E+ L A + K+ + + D+L +LE +E+ + + Sbjct: 20 QEPGVADDPVRFRKLMKEQSDLAPIVEAYNEYKQCRQNIEDSLAMLEEESDEEMRELAKE 79 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTR 143 E SD+ +R++ E +Q +L D ND +E+ AGAGG E+ +A + RMY Sbjct: 80 ELSDSRKRVE---ELEQELKILLLPKDPNDDKNVIVEIRAGAGGDEAALFAAEIYRMYVH 136 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +A+ R++KTE + +++ G K +I G AY LK E GVHR+ R+ +S R H Sbjct: 137 YADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRLKYESGVHRVQRVPETESGGRIH 196 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS ++ + P ++ +++ I E D RID RASG GGQ VNTTDSAVR+TH PTG+V+ Sbjct: 197 TSTITVAIMPEAEE-VDVVIDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYS 255 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q E+SQ +NK +A+ +LR+KLY+LEL+K++ A+ E+ +++IG G +IR+Y P Sbjct: 256 QTEKSQLQNKEKAFRLLRSKLYDLELEKQQ--ASEAEARRSQIGTGDRSEKIRTYNF-PQ 312 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R + +L+GDLD+ + + +A Sbjct: 313 GRVTDHRIKLTLHKLDTILNGDLDEIIDSLIA 344 >gi|94986447|ref|YP_594380.1| peptide chain release factor 1 [Lawsonia intracellularis PHE/MN1-00] gi|119361555|sp|Q1MSG7|RF1_LAWIP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|94730696|emb|CAJ54058.1| Protein chain release factor A [Lawsonia intracellularis PHE/MN1-00] Length = 359 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 107/276 (38%), Positives = 165/276 (59%), Gaps = 11/276 (3%) Query: 81 DCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWANM 136 D I + + +++++LE+ + ++E L D + LE+ AG GG E+ +A Sbjct: 69 DPDIQEMALEEIKKLELELTHLEYELKILLLPKDPLDEKNILLEIRAGTGGEEAALFAAD 128 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY R+AEK +K E + D + G K LI+G N Y LK E G HR+ R+ Sbjct: 129 LFRMYCRYAEKMHWKVEIMSQSDSDTGGFKEIIALIQGDNVYSRLKFESGTHRVQRVPTT 188 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P +D ++IEI + R D +R+SG GGQ VNTTDSAVR+THIP Sbjct: 189 ESQGRIHTSAATVAVLPEAED-VDIEIRPEELRFDVFRSSGPGGQSVNTTDSAVRVTHIP 247 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV CQ E+SQHKNKA+A +L ++L +++ Q+++EI ++ + +G G +IR Sbjct: 248 TGIVVTCQDEKSQHKNKAKALKVLSSRLLQIK-QEQQEIEQ-ADARRALVGSGDRSERIR 305 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +Y P V D R N+ S V++G++ +F+ A Sbjct: 306 TYNF-PQGRVTDHRINLTLYSLIKVMEGEIQEFIDA 340 >gi|255083621|ref|XP_002508385.1| predicted protein [Micromonas sp. RCC299] gi|226523662|gb|ACO69643.1| predicted protein [Micromonas sp. RCC299] Length = 366 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 115/283 (40%), Positives = 171/283 (60%), Gaps = 18/283 (6%) Query: 37 QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96 + V+ A ++ER+H S + I + + + ++A ED+ + L+ET+ L+ Sbjct: 45 ERVVRAYAAVKERRH--ETASLEQVIAESAGVDAEMAQMA--EDELATLEETTPALE--- 97 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 E L + EAD + LEV AGAGG E+ +A LLRMY +A K ++ E + Sbjct: 98 ---ETLAHLLLPADEADDSGVILEVRAGAGGDEAALFAADLLRMYEMFARKTGWRFELVA 154 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 + E G+K AT + G + YG LK E GVHR+ R+ ++ R HTS +S+ V P + Sbjct: 155 ANASEAGGVKEATASLAGDDVYGRLKFESGVHRVQRVPATETQGRVHTSTASVAVLPQAE 214 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 ++E++I + D +IDT RASGAGGQHVNTT+SAVRITH+PTGV V Q ERSQHKNK +A Sbjct: 215 -TVELDIRDDDLKIDTMRASGAGGQHVNTTNSAVRITHVPTGVTVVMQDERSQHKNKEKA 273 Query: 277 WNMLRAKLYELELQKREEIANI-GESSKTEIGWG---RQIRSY 315 +LRA++YELE R ++A+ + ++ IG G ++R+Y Sbjct: 274 MKVLRARVYELE---RRKLADARADQRRSLIGSGDRSERVRTY 313 >gi|206580278|ref|YP_002237908.1| peptide chain release factor 1 [Klebsiella pneumoniae 342] gi|288934821|ref|YP_003438880.1| peptide chain release factor 1 [Klebsiella variicola At-22] gi|290508964|ref|ZP_06548335.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55] gi|238058716|sp|B5XW51|RF1_KLEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|206569336|gb|ACI11112.1| peptide chain release factor 1 [Klebsiella pneumoniae 342] gi|288889530|gb|ADC57848.1| peptide chain release factor 1 [Klebsiella variicola At-22] gi|289778358|gb|EFD86355.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55] Length = 360 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A++EV AG GG E+ +A L RMY+R+AE R+++ E L ++GE G K Sbjct: 107 DERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWQVEILSANEGEHGGFKEVIAKF 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|238026092|ref|YP_002910323.1| peptide chain release factor 1 [Burkholderia glumae BGR1] gi|237875286|gb|ACR27619.1| Peptide chain release factor 1 [Burkholderia glumae BGR1] Length = 360 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 104/243 (42%), Positives = 151/243 (62%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AG GG ES +A LLRMY R+AE+++++ E + + G K + I Sbjct: 107 DDRNIFVEIRAGTGGDESALFAGDLLRMYLRYAERQRWQVEMMSESGSDLGGYKEVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGHGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQHAREAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELI-A 342 Query: 350 TLA 352 +LA Sbjct: 343 SLA 345 >gi|207744458|ref|YP_002260850.1| peptide chain release factor 1 (rf-1) protein [Ralstonia solanacearum IPO1609] gi|206595864|emb|CAQ62791.1| peptide chain release factor 1 (rf-1) protein [Ralstonia solanacearum IPO1609] Length = 356 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMYTR+AE+++++ E + + G K + Sbjct: 103 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D +I+I+ +D RIDT Sbjct: 163 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A +L A+L + Q+R Sbjct: 223 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ IG G +IR+Y P V D R N+ ++DGDLD+ + Sbjct: 281 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELL-G 338 Query: 350 TLA 352 TLA Sbjct: 339 TLA 341 >gi|153854177|ref|ZP_01995485.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814] gi|149753226|gb|EDM63157.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814] Length = 358 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 111/273 (40%), Positives = 165/273 (60%), Gaps = 13/273 (4%) Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYT 142 +E +DN +R++ E +Q +L D ND +E+ AGAGG E+ +A + RMY Sbjct: 79 EELNDNKKRVE---ELEQELKILLLPKDPNDEKNVIVEIRAGAGGDEAALFAAEIYRMYM 135 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 +AE +++K E +E + G+K+ T +I G AY +K E GVHR+ R+ +S R Sbjct: 136 HYAESQRWKVELVECEEIGIGGMKNVTFMIDGKGAYSKMKYESGVHRVQRVPETESGGRI 195 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS ++ V P +D ++I+I E D RID RASG GGQ VNTTDSAVR+TH PTG+V+ Sbjct: 196 HTSTITVAVMPEAED-VDIQIDEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIY 254 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 Q E+SQ +NK +A+ +LRAKLY+LE QKR + E+ K++IG G +IR+Y P Sbjct: 255 SQTEKSQLQNKDKAFALLRAKLYDLECQKRHDAE--AEARKSQIGTGDRSEKIRTYNF-P 311 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R + +++GD+ + + A +A Sbjct: 312 QGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIA 344 >gi|298292694|ref|YP_003694633.1| peptide chain release factor 1 [Starkeya novella DSM 506] gi|296929205|gb|ADH90014.1| peptide chain release factor 1 [Starkeya novella DSM 506] Length = 365 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 116/272 (42%), Positives = 159/272 (58%), Gaps = 17/272 (6%) Query: 76 ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133 AL E++ + L+E + L ++L +LL +A D LEV AG GG E+ + Sbjct: 77 ALAEEEVASLEEQVETLTHAVRL--------ALLPKDAMDERGVILEVRAGTGGDEAALF 128 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMY R+A + E L + +G G K + G AY LK E GVHR+ R+ Sbjct: 129 AGDLFRMYERFAGLNGWSVEVLSLTEGTAGGFKEIVAALHGSGAYAKLKFESGVHRVQRV 188 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + + R HTS +++ V P V+D ++I I+ESD RID +RASGAGGQHVN T+SAVRIT Sbjct: 189 PETEGSGRIHTSAATVAVLPEVED-VDIAINESDLRIDVFRASGAGGQHVNKTESAVRIT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG VV Q ERSQHKNKA+A MLRA++YE E +KR+ A E K ++G G Sbjct: 248 HLPTGTVVAVQDERSQHKNKARAMGMLRARIYEAEREKRDS-ARASE-RKVQVGSGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y P V D R + ++L G+ Sbjct: 306 RIRTYNF-PQGRVTDHRIGLTLHKLPEILSGE 336 >gi|57238625|ref|YP_179756.1| peptide chain release factor 1 [Campylobacter jejuni RM1221] gi|73621534|sp|Q5HSH9|RF1_CAMJR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|57167429|gb|AAW36208.1| peptide chain release factor 1 [Campylobacter jejuni RM1221] gi|315059063|gb|ADT73392.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni S3] Length = 355 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 100/221 (45%), Positives = 139/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AGAGG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DERNIFLEIRAGAGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ V P VDD IEIEI+ +D ++D Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E +A E+ K+++G G +IR+Y P + D R N+ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320 >gi|33519808|ref|NP_878640.1| peptide chain release factor 1 [Candidatus Blochmannia floridanus] gi|81666793|sp|Q7VR74|RF1_BLOFL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33504153|emb|CAD83415.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia floridanus] Length = 358 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 109/279 (39%), Positives = 167/279 (59%), Gaps = 17/279 (6%) Query: 79 EDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 +D+ IL + NL+ +IK+ L S D + ++E+ AG GG E+ +A L Sbjct: 78 QDELKILNTSKHNLENKIKI--------LLFSDPQDQYNCFIELRAGTGGKEAAIFAGEL 129 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+R+ E +++ E + GE G K + + +YG LK E G HR+ RI + Sbjct: 130 FRMYSRYIEMQRWNMEIIHATYGECGGYKEIIIKVPVHGSYGQLKFESGGHRVQRIPNTE 189 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS +I V P + ++I EI+ +D RIDT+R+SGAGGQHVNTTDSA+RITHIP+ Sbjct: 190 SQGRIHTSTCTIAVIPNIPNAILPEINSNDLRIDTFRSSGAGGQHVNTTDSAIRITHIPS 249 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWG---RQIR 313 G+ V+CQ ERSQHKNK++A ++L+++LY + + QK++E +N+ + IG G +IR Sbjct: 250 GLSVECQDERSQHKNKSKALSVLKSRLYAINIKQKQQEESNV---RRNLIGTGDRSDRIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +Y Q + V D R D+++G LD ++ + Sbjct: 307 TYNFQQGR-VTDHRIAFTSYKLHDIMNGKLDILIQPIMC 344 >gi|207721782|ref|YP_002252220.1| peptide chain release factor 1 (rf-1) protein [Ralstonia solanacearum MolK2] gi|206586946|emb|CAQ17530.1| peptide chain release factor 1 (rf-1) protein [Ralstonia solanacearum MolK2] Length = 356 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMYTR+AE+++++ E + + G K + Sbjct: 103 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D +I+I+ +D RIDT Sbjct: 163 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A +L A+L + Q+R Sbjct: 223 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ IG G +IR+Y P V D R N+ ++DGDLD+ + Sbjct: 281 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELL-G 338 Query: 350 TLA 352 TLA Sbjct: 339 TLA 341 >gi|56697312|ref|YP_167678.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3] gi|81558450|sp|Q5LQM7|RF1_SILPO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56679049|gb|AAV95715.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3] Length = 351 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 120/295 (40%), Positives = 166/295 (56%), Gaps = 14/295 (4%) Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYK-QFESLLSGEADSNDAYLEVH 122 +LC ++ L + D L E L + +L E E Q L AD+ A LE+ Sbjct: 52 QLCADMDEARAMLSDPDMKALAEEELPLLKARLPEAEQALQLALLPKDAADARPAMLEIR 111 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+ +A LLRMY R+AE R +K E +E+ + E GIK I G N + LK Sbjct: 112 PGTGGDEAALFAGDLLRMYQRYAEARGWKLELIELQETELGGIKEVVARISGENVFARLK 171 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S R HTS +++ V P D ++I+I D RIDT R+SGAGGQH Sbjct: 172 YESGVHRVQRVPETESGGRIHTSAATVAVLPEAQD-VDIQIDPGDIRIDTMRSSGAGGQH 230 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK--REEIANIGE 300 VNTTDSAVRITH+P+G+VV E+SQH+N+ A +L+ +LY+LE Q+ RE A Sbjct: 231 VNTTDSAVRITHLPSGIVV-TSSEKSQHRNREIAMQVLKTRLYDLERQRLDRERSA---- 285 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S ++G G +IR+Y P + D R N+ V+ GDLD+ + A A Sbjct: 286 SRSAQVGTGDRSERIRTYNF-PQGRMTDHRINLTLYKLDAVMQGDLDEVIDALAA 339 >gi|300702903|ref|YP_003744504.1| peptide chain release factor rf-1 [Ralstonia solanacearum CFBP2957] gi|299070565|emb|CBJ41860.1| peptide chain release factor RF-1 [Ralstonia solanacearum CFBP2957] Length = 356 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMYTR+AE+++++ E + + G K + Sbjct: 103 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D +I+I+ +D RIDT Sbjct: 163 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A +L A+L + Q+R Sbjct: 223 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ IG G +IR+Y P V D R N+ ++DGDLD+ + Sbjct: 281 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELL-G 338 Query: 350 TLA 352 TLA Sbjct: 339 TLA 341 >gi|167754864|ref|ZP_02426991.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402] gi|237735404|ref|ZP_04565885.1| peptide chain release factor 1 [Mollicutes bacterium D7] gi|167704914|gb|EDS19493.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402] gi|229381149|gb|EEO31240.1| peptide chain release factor 1 [Coprobacillus sp. D7] Length = 358 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 98/242 (40%), Positives = 147/242 (60%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AGG E +A L RMY ++AE + +K E +E D E G + ++ Sbjct: 109 DNKDVIMEIRGAAGGDEGNIFAGDLYRMYVKYAESQGWKVEVMEAVDAEAGGYSLISFMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG + YG LK E G HR+ R+ ++ R HTS +++ V P +++ +++EI++SD RIDT Sbjct: 169 KGEDVYGKLKFESGSHRVQRVPKTETQGRVHTSTATVLVMPEMEE-VDVEINKSDLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITH+PTG+V Q RSQH NK +A L +++Y+ Q+ Sbjct: 228 YRASGAGGQHINKTDSAVRITHLPTGIVAASQDGRSQHDNKDKAMKALVSRIYDFYQQQH 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E +G K+++G G +IR+Y P V D R + ++DG LDD + A Sbjct: 288 DE--QVGSERKSKVGSGDRAEKIRTYNY-PQNRVTDHRIGLTIQQLDRIVDGKLDDIITA 344 Query: 350 TL 351 + Sbjct: 345 LI 346 >gi|15890803|ref|NP_356475.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58] gi|22096038|sp|Q8U8B8|RF1_AGRT5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|15159088|gb|AAK89260.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58] Length = 360 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 104/244 (42%), Positives = 151/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A + +K E L +GE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ +++ R HTS +++ V P +D I++EI D RID Sbjct: 167 ITGRGVFSKLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAED-IDVEIRPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITH+PTG++V E+SQH+N+A+A +LR++LY++E QK Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHLPTGLIV-TSSEKSQHQNRAKAMQVLRSRLYDIERQK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P V D R N+ V++G++D+ + Sbjct: 285 VD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGEIDELVD 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALIA 345 >gi|297539749|ref|YP_003675518.1| peptide chain release factor 1 [Methylotenera sp. 301] gi|297259096|gb|ADI30941.1| peptide chain release factor 1 [Methylotenera sp. 301] Length = 360 Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 123/311 (39%), Positives = 174/311 (55%), Gaps = 20/311 (6%) Query: 48 ERQHL-DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 E+ HL + A + IKE Q L D + E A EE + + KLE K + Sbjct: 50 EQYHLFEQAEADIKEAQSMLSDP-DMKEFAQEEIEAG----------KEKLEQVEKSLQV 98 Query: 107 LL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 LL D + +LE+ AG GG ES + L RMY+R+AEK+K+K E + ++ E G Sbjct: 99 LLLPKDPNDDKNLFLEIRAGTGGDESGLFCGDLFRMYSRYAEKQKWKVEIMSANESEVGG 158 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K I+G AY LK E G HR+ R+ ++ R HTS ++ V P D+ ++ I+ Sbjct: 159 YKEIIAKIEGYGAYSKLKFESGGHRVQRVPDTETQGRIHTSACTVAVLPEADEVSDVVIN 218 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VV+CQ+ RSQH NKAQA +L A++ Sbjct: 219 PADIRIDTYRASGAGGQHINKTDSAVRITHAPTGIVVECQEGRSQHANKAQAMAVLAARI 278 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 ++ E+ + I K+ IG G +IR+Y P + D R N+ + +G Sbjct: 279 KAKQVD--EQNSKIASERKSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKIDAITEG 335 Query: 342 DLDDFMKATLA 352 D+D+ + A A Sbjct: 336 DMDELIGALSA 346 >gi|332526537|ref|ZP_08402649.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2] gi|332110805|gb|EGJ10982.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2] Length = 351 Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 115/336 (34%), Positives = 187/336 (55%), Gaps = 16/336 (4%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL+ L+ DP + +V + L RE+ + + + + R D E+ + E D Sbjct: 2 RLAELDALLADPQVAADVKRLRTLSREQSEVADVVGRWRRYLQREQDLAAAREMLVAESD 61 Query: 82 CSIL----QETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + QE D +L R++ E+ Q + D+ +A++E+ AG GG ES +A Sbjct: 62 AEMAAMAEQEVVDAEADLARLEHEL---QLALIPRDPDDARNAFVEIRAGTGGDESALFA 118 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+ E++ ++ E + + E G K L + G + +G L+ E G HR+ R+ Sbjct: 119 GDLARMYLRYFERQGWRVEVMSASESELGGYKELVLKVDGTDVFGTLRFESGGHRVQRVP 178 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D++ E++++ ++ RIDT+RASGAGGQHVN TDSA+RITH Sbjct: 179 ATEAQGRIHTSACTVAVMPEPDEAEEVQLNPAELRIDTFRASGAGGQHVNKTDSAIRITH 238 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ +RSQH+NKA+A +L A+L E + +R + K+ +G G + Sbjct: 239 LPTGIVAECQDDRSQHRNKAKAMAVLAARLREKDRAERAAKEA--ATRKSLVGSGDRSDR 296 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 IR+Y P + D R N+ ++DG+LDD + Sbjct: 297 IRTYNF-PQGRLTDHRINLTLYKLGQIMDGELDDVV 331 >gi|242371609|ref|ZP_04817183.1| peptide chain release factor 1 [Staphylococcus epidermidis M23864:W1] gi|242350676|gb|EES42277.1| peptide chain release factor 1 [Staphylococcus epidermidis M23864:W1] Length = 358 Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 191/346 (55%), Gaps = 15/346 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD D +R LN DP + + + + +E+ L + K ++ L D Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRSYKSKKEELED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 +L ++++ +L+E S L+ ++E ++ + LL D D +E+ A AG Sbjct: 61 IEEMLRETSDKEEVEMLKEESTALKNELPDME-EELKILLIPKDPNDEKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGVV E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHLPTGVVA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G +IR+Y P V D R + +++G LD+ + A Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLDEIIDA 340 >gi|227499754|ref|ZP_03929854.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC 35098] gi|227218140|gb|EEI83406.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC 35098] Length = 358 Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 119/335 (35%), Positives = 189/335 (56%), Gaps = 13/335 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82 L K DP + ++ + RE L + +I+D + +N L+ A ++D Sbjct: 15 LEKKMIDPEVLADISRLTKITREYNSLKPIVEKYDQIKDAESTIEENKELINEADDQDMI 74 Query: 83 SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 +L+E +++ L+ ++ + LL DS D +E+ GAGG E+ +A L RM Sbjct: 75 DMLKEEIKENEKL-LDQYNEEMKILLIPKDPNDSRDVIVEIRPGAGGDEAGLFAGDLYRM 133 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y +A+K +KTE +E+ GIK AT +++G AY K E GVHR+ R+ +S Sbjct: 134 YHMYADKEGYKTEDVEVTPQGVGGIKDATFMVRGEGAYSRFKYESGVHRVQRVPETESGG 193 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P VD+ +++ + +D R D +R+SG GGQ VNTTDSAVR+THIPTG+V Sbjct: 194 RIHTSTATVAVLPEVDE-LDVHVDPNDIRTDVFRSSGNGGQSVNTTDSAVRLTHIPTGIV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V Q E+SQ KNK +A +L A++YELE +KR + I ++ K+++G G +IR+Y Sbjct: 253 VSMQDEKSQIKNKEKAMKILLARIYELEEEKRNK--EIADNRKSQVGTGDRSERIRTYNF 310 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P + D R N D L+G + + + + +A Sbjct: 311 -PQGRITDHRINKTIYQLDDFLNGGIGEMIDSLIA 344 >gi|303279527|ref|XP_003059056.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458892|gb|EEH56188.1| predicted protein [Micromonas pusilla CCMP1545] Length = 337 Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 113/330 (34%), Positives = 184/330 (55%), Gaps = 13/330 (3%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L+ L+ + + LW + AK +M + + + +D+L D LE+ ++ Sbjct: 10 LADLDKRASEATLWDDPKNAKAVMEQLADVREQLELAAAFEDKLGDARTALEMIADDPSS 69 Query: 83 SIL----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++ E SD + ++ +E + LL G D+ A + ++AG GG ++ +WA L Sbjct: 70 DVVPELASEISDAIASLEAALETWETRRLLVGTYDALGATVFINAGFGGFDAHEWAERLE 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 Y WA +R F GEE G++S TL I G AYG+L E+G HR+VRI Sbjct: 130 SCYVAWARRRGFAVRVEARTPGEEVGLRSVTLEIDGRFAYGYLASEKGAHRMVRIGGVAG 189 Query: 199 NSR--RHTSFSSIWVYPVVDD---SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + RH++F ++ V P +++ SI + I T R+ GAGGQ+VN ++AVR+ Sbjct: 190 QTPRGRHSNFVAVDVAPTLEEKARSIHWSPYDRVRVITTMRSGGAGGQNVNKVETAVRMK 249 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANI-GESSKTEIGWGRQ 311 H+PTG+VV+C++ERSQ N+A+A L+AKL + ++R ++A + G+ + E G+Q Sbjct: 250 HLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVVRAE--RGQQ 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 IR+YVL PY++VKD+RT +E + VL G Sbjct: 308 IRNYVLHPYKLVKDVRTGVETSDVDGVLSG 337 >gi|168237830|ref|ZP_02662888.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197289243|gb|EDY28610.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 360 Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A ++ E KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGACIHAAETAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|291166475|gb|EFE28521.1| peptide chain release factor 1 [Filifactor alocis ATCC 35896] Length = 354 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 99/243 (40%), Positives = 151/243 (62%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +A +L RMY+ +A R +K E + ++ G K +I Sbjct: 106 DEKNVIVEIRGGAGGDEAALFAGVLFRMYSMYASARNWKVEMMSANETGIGGYKEVVFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +S+ R HTS S++ V P VDD +E+E+ +D R+D Sbjct: 166 TGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTSTVAVLPEVDD-VEVELDMNDVRVDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVR+TH PTG+V+ Q E+SQ KNK +A+ +L+AKLY+LEL+K Sbjct: 225 FRSSGNGGQSVNTTDSAVRLTHKPTGIVISMQDEKSQLKNKEKAFKILKAKLYDLELEKA 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + K+++G G +IR+Y P V D R + + L+GD+D+ + A Sbjct: 285 QK--ELAQERKSQVGSGDRSERIRTYNY-PQGRVTDHRIGLTLYKLENFLNGDIDEILDA 341 Query: 350 TLA 352 + Sbjct: 342 LIT 344 >gi|259908618|ref|YP_002648974.1| peptide chain release factor 1 [Erwinia pyrifoliae Ep1/96] gi|224964240|emb|CAX55747.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae Ep1/96] Length = 360 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 12/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLEV AG GG E+ +A L RMY+R+AE R++K E + ++GE G K + Sbjct: 107 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ SD +IDT Sbjct: 167 IGEGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L +++ E+ +R Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARR 286 Query: 293 EEIANIGESSKTE---IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ E S T +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQ-----EESSTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDAL 340 Query: 347 MKATL 351 ++ + Sbjct: 341 IEPIV 345 >gi|239817175|ref|YP_002946085.1| peptide chain release factor 1 [Variovorax paradoxus S110] gi|259585259|sp|C5CXW3|RF1_VARPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|239803752|gb|ACS20819.1| peptide chain release factor 1 [Variovorax paradoxus S110] Length = 362 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 101/246 (41%), Positives = 150/246 (60%), Gaps = 6/246 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A+LE+ AG GG ES +A LLRMYTR+ E+ ++ E + + E G K + I Sbjct: 107 DARNAFLEIRAGTGGDESALFAGDLLRMYTRYCERAGWRCEVVSESESELGGYKEVVIRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + +G L+ E G HR+ R+ ++ R HTS ++ V D+++ ++I+ +D RIDT Sbjct: 167 AGNDVFGRLRFESGGHRVQRVPATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG+V +CQ +RSQH+NKA+A +L A++ E + + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKD--RS 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A K IG G +IR+Y P + D R N+ +++GDL D + A Sbjct: 285 ERAAKDAAMRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLQAIMEGDLGDVLDA 343 Query: 350 TLAIKK 355 A ++ Sbjct: 344 LRAARE 349 >gi|90022891|ref|YP_528718.1| peptide chain release factor 1 [Saccharophagus degradans 2-40] gi|119361599|sp|Q21FM3|RF1_SACD2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|89952491|gb|ABD82506.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharophagus degradans 2-40] Length = 360 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 100/239 (41%), Positives = 145/239 (60%), Gaps = 6/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ ++ L RMY+R+AE + +K E + + GE G K + Sbjct: 109 DGKNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAESKGWKVEIISENQGEHGGYKEIITRV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ V P D+ E+ I+++D RIDT Sbjct: 169 VGQGVYSELKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADEMAEVNINKADLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+R+THIPTGVVV+CQ ERSQHKN+A+A ++L ++L Q+ Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMSLLASRLS--MAQEE 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + A + K+ +G G +IR+Y P V D R N+ +V+ G L D ++ Sbjct: 287 KAAAEQASARKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVMQGALGDVIQ 344 >gi|289163904|ref|YP_003454042.1| peptide chain release factor 1 [Legionella longbeachae NSW150] gi|288857077|emb|CBJ10892.1| peptide chain release factor 1 [Legionella longbeachae NSW150] Length = 362 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 115/284 (40%), Positives = 165/284 (58%), Gaps = 12/284 (4%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHA 123 DN+ LE L +D + + L K +VE Q+ + D + YLE+ A Sbjct: 60 DNVSSLEELLAGEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRA 119 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +A L RMY R+AE++ ++ E + GE G K I G Y LK Sbjct: 120 GTGGDEAAIFAGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKF 179 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ + P VD+ +I+I+ D RIDTYR+SGAGGQHV Sbjct: 180 ESGAHRVQRVPETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHV 239 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESS 302 N TDSA+RITHIPTGVVV+CQ ERSQHKN+++A ++L+ +L + E K R+E A ++ Sbjct: 240 NKTDSAIRITHIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQA---QTR 296 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 K+ +G G +IR+Y P + D R N+ +DV++G L Sbjct: 297 KSLVGTGDRSERIRTYNY-PQGRLTDHRINLTIYQLNDVMEGKL 339 >gi|161526057|ref|YP_001581069.1| peptide chain release factor 1 [Burkholderia multivorans ATCC 17616] gi|189349228|ref|YP_001944856.1| peptide chain release factor 1 [Burkholderia multivorans ATCC 17616] gi|238687082|sp|A9AJ68|RF1_BURM1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160343486|gb|ABX16572.1| peptide chain release factor 1 [Burkholderia multivorans ATCC 17616] gi|189333250|dbj|BAG42320.1| peptide chain release factor RF-1 [Burkholderia multivorans ATCC 17616] Length = 360 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 107/261 (40%), Positives = 160/261 (61%), Gaps = 9/261 (3%) Query: 96 KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +LEVE ++ LL + D + ++E+ AG GG ES +A LLRMY R+AE+++++ E Sbjct: 91 RLEVELQKM--LLPKDPNDDRNIFVEIRAGTGGDESALFAGDLLRMYLRFAERQRWQVEM 148 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 + + G K + I G AY LK E G HR+ R+ ++ R HTS ++ V P Sbjct: 149 MSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPE 208 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK Sbjct: 209 ADEIGEVEINLADLRIDTFRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKD 268 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A +L A++ + Q E+ A + K+ IG G +IR+Y P + D R N+ Sbjct: 269 RALKVLAARIK--DKQYHEQHAKEAATRKSLIGSGDRSERIRTYNF-PQGRMTDHRINLT 325 Query: 332 KTSPSDVLDGDLDDFMKATLA 352 ++DGDLD+ + A ++ Sbjct: 326 LYRLEAIMDGDLDELIGALVS 346 >gi|311109118|ref|YP_003981971.1| peptide chain release factor [Achromobacter xylosoxidans A8] gi|310763807|gb|ADP19256.1| peptide chain release factor 1 [Achromobacter xylosoxidans A8] Length = 360 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 105/246 (42%), Positives = 149/246 (60%), Gaps = 9/246 (3%) Query: 113 DSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D ND +LE+ AG GG ES ++ LLRMYTR+AE+R ++ E + E G K Sbjct: 104 DPNDGRSLFLEIRAGTGGDESALFSGDLLRMYTRYAEQRGWRVELMSESASELGGYKEVI 163 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 I G AYG LK E G HR+ R+ ++ R HTS ++ + D+ EI I+ +D R Sbjct: 164 ARIDGDGAYGRLKFESGAHRVQRVPATEAQGRIHTSACTVAIMAEADEMSEIVINPNDLR 223 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDT+RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A +L A+L + E Sbjct: 224 IDTFRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKET 283 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++R+ + K+ IG G +IR+Y P V D R N+ +++GDL++ Sbjct: 284 RERQ--SKEAAERKSLIGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEEL 340 Query: 347 MKATLA 352 A +A Sbjct: 341 TGALIA 346 >gi|206901386|ref|YP_002250520.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12] gi|226739102|sp|B5YDB2|RF1_DICT6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|206740489|gb|ACI19547.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12] Length = 367 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 98/238 (41%), Positives = 148/238 (62%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +A L RMY +A+K+ +K E + + G K ++ Sbjct: 111 DEKNIIMEIRAGTGGEEAALFAADLFRMYVGYAQKKGWKVEIVSSNPTGLGGYKEIIFIV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S+ R HTS +++ V P +++ +++EI D RI+T Sbjct: 171 EGKGAYSRLKFESGVHRVQRVPITESSGRIHTSTATVAVLPEMEE-VDVEIDPKDLRIET 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+ GAGGQHVN T+S VRITHIP+G+VVQCQ ERSQH+N+ +A +LRA+LY E +R Sbjct: 230 FRSGGAGGQHVNKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLY--EYYQR 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E+ I + ++G G +IR+Y P + V D R N +VL G+LD+F+ Sbjct: 288 EKENEIASQRRQQVGTGERSEKIRTYNF-PQRRVTDHRINYSSFQLEEVLSGELDEFI 344 >gi|283478591|emb|CAY74507.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM 12163] Length = 363 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 12/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLEV AG GG E+ +A L RMY+R+AE R++K E + ++GE G K + Sbjct: 110 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKV 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ SD +IDT Sbjct: 170 IGEGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDT 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L +++ E+ +R Sbjct: 230 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARR 289 Query: 293 EEIANIGESSKTE---IGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ E S T +G G + R+Y P V D R N+ + ++G LD Sbjct: 290 QQ-----EESSTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDAL 343 Query: 347 MKATL 351 ++ + Sbjct: 344 IEPIV 348 >gi|83747499|ref|ZP_00944537.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia solanacearum UW551] gi|83725813|gb|EAP72953.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia solanacearum UW551] Length = 374 Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 150/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMYTR+AE+++++ E + + G K + Sbjct: 121 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 180 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D +I+I+ +D RIDT Sbjct: 181 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDT 240 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A +L A+L + Q+R Sbjct: 241 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 298 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ IG G +IR+Y P V D R N+ ++DGDLD+ + Sbjct: 299 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELL-G 356 Query: 350 TLA 352 TLA Sbjct: 357 TLA 359 >gi|270157830|ref|ZP_06186487.1| peptide chain release factor 1 [Legionella longbeachae D-4968] gi|269989855|gb|EEZ96109.1| peptide chain release factor 1 [Legionella longbeachae D-4968] Length = 351 Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 115/284 (40%), Positives = 165/284 (58%), Gaps = 12/284 (4%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHA 123 DN+ LE L +D + + L K +VE Q+ + D + YLE+ A Sbjct: 49 DNVSSLEELLAGEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRA 108 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +A L RMY R+AE++ ++ E + GE G K I G Y LK Sbjct: 109 GTGGDEAAIFAGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKF 168 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS ++ + P VD+ +I+I+ D RIDTYR+SGAGGQHV Sbjct: 169 ESGAHRVQRVPETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHV 228 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESS 302 N TDSA+RITHIPTGVVV+CQ ERSQHKN+++A ++L+ +L + E K R+E A ++ Sbjct: 229 NKTDSAIRITHIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQA---QTR 285 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 K+ +G G +IR+Y P + D R N+ +DV++G L Sbjct: 286 KSLVGTGDRSERIRTYNY-PQGRLTDHRINLTIYQLNDVMEGKL 328 >gi|114768932|ref|ZP_01446558.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255] gi|114549849|gb|EAU52730.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255] Length = 351 Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 126/335 (37%), Positives = 188/335 (56%), Gaps = 12/335 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R +L K D V E L +E L + I+ + L D E+ L+ + Sbjct: 13 RFDYLEAKMAD---GSAVDEIAKLSKEYSDLKPVVDQIENYKATLLDISEAEEMLLDPEL 69 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + +E NL+ +E+K SLL EAD A +E+ AG GG E+ +A LLRM Sbjct: 70 KVLAEEELPNLKEKLPILEHKLLLSLLPKDEADDKPAIIEIRAGTGGDEAALFAGDLLRM 129 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R+ E + +K E +E ++ E G K A + +KG + LK E GVHR+ R+ +S Sbjct: 130 YNRFCEDQGWKFEIVEGNETELGGYKEAIINVKGVGVFARLKYESGVHRVQRVPTTESGG 189 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ + P ++ I++EI +D R+DTYR+SGAGGQHVNTTDSAVRITH+PTG++ Sbjct: 190 RVHTSAATVAIMPEAEN-IDLEIPTTDIRLDTYRSSGAGGQHVNTTDSAVRITHLPTGLI 248 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V E+SQH+N+ A N+LR +LY +LQ+++ + K ++G G +IR+Y Sbjct: 249 V-TSSEKSQHRNREIAMNVLRTRLY--DLQRQQAADERAATRKDQVGSGDRSERIRTYNF 305 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R N+ V+ GDL++F+ A A Sbjct: 306 -PQGRVSDHRINLTLYKLDQVMQGDLNEFIDALTA 339 >gi|51891211|ref|YP_073902.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM 14863] gi|81610729|sp|Q67TD5|RF1_SYMTH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|51854900|dbj|BAD39058.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM 14863] Length = 356 Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 125/345 (36%), Positives = 185/345 (53%), Gaps = 19/345 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 + VQR L K DP + N E + + RE L + + Q L D L + Sbjct: 5 LEGVVQRYEDLTYKLGDPSVINNPTEYRQVAREHNRLGPIVEKFRAYQKTERELDDVLEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130 LE L+ ++ ++ + +L+ KL+ + LL D + +E+ AGAGG E+ Sbjct: 65 LEGPLDPEERALFNQELRDLKE-KLQTLSDELRILLLPRDPNDDKNVIMEIRAGAGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYTR AE+ K+KTE L I + E GIK I AY LK E GVHR+ Sbjct: 124 SLFAAELFRMYTRLAERHKWKTEVLSISENEAGGIKEVLFQINAEGAYSRLKYEGGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P +++ ++IEI D +I+ RA GAGGQHVN T+SAV Sbjct: 184 QRVPVTESQGRIHTSTVTVAVMPEMEE-VDIEIKPEDLKIEVQRAGGAGGQHVNKTESAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL--YELELQKREE----IANIGESSKT 304 R+TH+PTG+VV C ERSQ +N+ +A +LRA++ Y + K EE A +G ++ Sbjct: 243 RMTHLPTGIVVYCADERSQMQNREKALRVLRARVADYYAQQAKSEEEQLRRAQVGTGERS 302 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E +IR+Y P V D R + + + V+DG++D + A Sbjct: 303 E-----KIRTYNF-PQDRVTDHRIGLTVHNIAAVMDGEIDHIIDA 341 >gi|295094043|emb|CBK83134.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus sp. ART55/1] Length = 358 Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 123/356 (34%), Positives = 198/356 (55%), Gaps = 28/356 (7%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD------- 64 +FD + V +L +N + DP + + + + LM+E+ L + E +D Sbjct: 1 MFDRLEELVDKLDTINNQLTDPDVVSDQNKFRKLMKEQSDLSPIVEKYHEYKDAKTTIED 60 Query: 65 -----RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + L E+A EE + E NL+ I+ E+ + L DS + + Sbjct: 61 SLEILEEESDEELREMAKEE-----MNEAKANLETIEQEL---KILLLPKDPNDSKNVIV 112 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ AGAGG E+ +A + RMY ++ ++ K+K E + +++ G K A +I G AY Sbjct: 113 EIRAGAGGDEAALFAYEVYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYS 172 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +K E GVHR+ RI +S R HTS ++ V P ++ +++EI+E+D RID RASG G Sbjct: 173 KMKYESGVHRVQRIPKTESGGRIHTSTITVAVMPEAEE-VDVEINENDIRIDVMRASGNG 231 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR+KLY++ELQK+ + Sbjct: 232 GQCVNTTDSAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAE--A 289 Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +++IG G +IR+Y P V D R + +++GDL++ + + +A Sbjct: 290 ADRRSQIGTGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIA 344 >gi|329888688|ref|ZP_08267286.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568] gi|328847244|gb|EGF96806.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568] Length = 345 Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 116/281 (41%), Positives = 163/281 (58%), Gaps = 16/281 (5%) Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWA 134 AL D+ L E L+R EV L +AD N A LEV AG GG E+ +A Sbjct: 62 ALASDELDALTERLPTLER---EVALL----LAPRDADENASAVLEVRAGTGGDEAALFA 114 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+A+ R ++ E +G+ G K + G +G LK E GVHR+ R+ Sbjct: 115 GDLFRMYSRYAQSRGWRVEIDSAAEGDAGGFKEIIATVSGEGVFGRLKFESGVHRVQRVP 174 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++I V P V+D +EIEI + D RIDTYR+SGAGGQHVN TDSAVRITH Sbjct: 175 TTEAGGRIHTSAATIAVLPEVED-VEIEILDKDIRIDTYRSSGAGGQHVNKTDSAVRITH 233 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V E+SQH N+ +A LR +LY+++ Q ++ A ++ K+++G G + Sbjct: 234 LPTGIVA-TSSEKSQHVNRDKAMKNLRVRLYDMQRQAKD--AARSDARKSQVGSGDRSER 290 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P V D R + S +L+GDLD + A +A Sbjct: 291 IRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDPMLNALIA 330 >gi|238810252|dbj|BAH70042.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 373 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 126/350 (36%), Positives = 190/350 (54%), Gaps = 32/350 (9%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK--EIQDRLCDNLIL 72 +DN V++L +D + N+ E + +E + D A +F K +Q+ D ++ Sbjct: 31 YDNLVKKL-------DDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 83 Query: 73 LELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + EE+ SI++E L +++ E+ + L E D + +E+ AGG E Sbjct: 84 INSKNEEEVLFAKSIIEENEVKLAQLEEEL---KILILPKDENDDKNVIMEIRGAAGGDE 140 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L +MYT++AE FK + + G IKG AY LK E GVHR Sbjct: 141 ANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHR 200 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P +DDS++IEI D +IDTYR+SGAGGQ VNTTDSA Sbjct: 201 VQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSA 260 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-------IANIGESS 302 VRITH+PTG+VV Q ERSQ N+ A +L++KLY+LE+QK+++ +A G+ S Sbjct: 261 VRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDRS 320 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + +IR+Y P V D R TS V++G L ++A L Sbjct: 321 E-------KIRTYNY-PQDRVTDHRIGYS-TSLKQVMEGKLLTIIEALLT 361 >gi|85711946|ref|ZP_01043000.1| Protein chain release factor A [Idiomarina baltica OS145] gi|85694132|gb|EAQ32076.1| Protein chain release factor A [Idiomarina baltica OS145] Length = 362 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 110/295 (37%), Positives = 170/295 (57%), Gaps = 11/295 (3%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ----ETSDNLQRIKLE 98 + L +E L+ +S + D E+A ++DD + + E +D QR++ Sbjct: 36 RSLSKEYAQLEEVVSAFNSYRQAQSDLTAAHEMA-DDDDPEMREMANEEIADAKQRVESL 94 Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 Q L D YLE+ AGAGG E+ +A L RMY+R+AE+ ++ + + Sbjct: 95 ENSLQVLLLPKDPNDDRACYLEIRAGAGGDEAAIFAGDLFRMYSRYAEQHGWRVSTVSAN 154 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +GE G K + G YG +K E G HR+ R+ +S R HTS ++ V P + ++ Sbjct: 155 EGEHGGYKEVIAQLSGDGVYGRMKFESGGHRVQRVPETESQGRIHTSACTVAVLPEIPEA 214 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IEI+ +D R+DT+RASGAGGQHVN TDSA+RITH+P+GVVV+CQ+ERSQHKN+A+A + Sbjct: 215 EAIEINPADLRVDTFRASGAGGQHVNRTDSAIRITHLPSGVVVECQEERSQHKNRAKAMS 274 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +L+++L +E +KR + + ++ +G G +IR+Y P V D R N+ Sbjct: 275 VLQSRLQRMEDEKRAQ--EEASTRRSLVGSGDRSERIRTYNY-PQSRVTDHRINL 326 >gi|258592988|emb|CBE69299.1| peptide chain release factor 1 [NC10 bacterium 'Dutch sediment'] Length = 358 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 108/244 (44%), Positives = 151/244 (61%), Gaps = 7/244 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD LEV AGAGG E+ +A L+RMY R+AE R +K E L G+K A L Sbjct: 108 ADEKSIILEVRAGAGGDEAALFAAELVRMYGRYAELRGWKVEMLSSSQTGVGGVKEAILS 167 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G AY LK E GVHR+ R+ +S+ R HTS ++ V P +D +EI+I D RID Sbjct: 168 IEGRGAYSRLKFESGVHRVQRVPVTESSGRIHTSTVTVAVLPEAED-VEIQIDPKDLRID 226 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +R++G GGQ VNTTDSAVRITH+PTG+VV CQ E+SQHKN+A+A +LRA+L LE Sbjct: 227 VFRSTGPGGQSVNTTDSAVRITHLPTGMVVSCQDEKSQHKNRAKAMKVLRARL--LEAAT 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 ++ A I ++ + ++G G +IR+Y P V D R + S +L+G++++ + Sbjct: 285 AQQAAEISQARRQQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHSLPRILEGEIEELIG 343 Query: 349 ATLA 352 A A Sbjct: 344 ALAA 347 >gi|242241525|ref|ZP_04795970.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144] gi|242235068|gb|EES37379.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144] gi|319399600|gb|EFV87855.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909] Length = 358 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 121/346 (34%), Positives = 192/346 (55%), Gaps = 15/346 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD D +R LN DP + + + + +E+ L + K ++ L D Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 +L ++++ +L+E S L+ ++E ++ + LL D D +E+ A AG Sbjct: 61 IEDMLSETSDKEEVEMLKEESSALKTELPDME-EELKILLIPKDPNDDKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P +D +EIEI D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G +IR+Y P V D R + + +++G LD+ ++A Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLNQIMEGHLDEIVEA 340 >gi|110635328|ref|YP_675536.1| peptide chain release factor 1 [Mesorhizobium sp. BNC1] gi|119361558|sp|Q11E04|RF1_MESSB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110286312|gb|ABG64371.1| bacterial peptide chain release factor 1 (bRF-1) [Chelativorans sp. BNC1] Length = 359 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 104/246 (42%), Positives = 152/246 (61%), Gaps = 10/246 (4%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD +A LE+ AG GG E+ +A L RMY R+A +R ++ E + +GE G K Sbjct: 106 EADEKNAILEIRAGTGGDEAALFAGDLFRMYERYASERGWRVEVVSASEGEAGGYKEIIA 165 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G + LK E GVHR+ R+ ++ R HTS +++ V P +D I+++I D RI Sbjct: 166 SVTGRGVFSRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAED-IDVDIKPEDIRI 224 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRITH+PTG++V E+SQH+N+A+A +LRA+L+++E Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHLPTGIMV-VSAEKSQHQNRARAMQILRARLFDME-- 281 Query: 291 KREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 R AN E+ + ++G G +IR+Y P V D R N+ V++G+LD+ Sbjct: 282 -RSRAANERSEARRLQVGTGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDEV 339 Query: 347 MKATLA 352 + A +A Sbjct: 340 IDALIA 345 >gi|319777684|ref|YP_004137335.1| peptide chain release factor 1 [Mycoplasma fermentans M64] gi|318038759|gb|ADV34958.1| Peptide chain release factor 1 [Mycoplasma fermentans M64] Length = 358 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 126/350 (36%), Positives = 190/350 (54%), Gaps = 32/350 (9%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK--EIQDRLCDNLIL 72 +DN V++L +D + N+ E + +E + D A +F K +Q+ D ++ Sbjct: 16 YDNLVKKL-------DDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 68 Query: 73 LELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + EE+ SI++E L +++ E+ + L E D + +E+ AGG E Sbjct: 69 INSKNEEEVLFAKSIIEENEVKLAQLEEEL---KILILPKDENDDKNVIMEIRGAAGGDE 125 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L +MYT++AE FK + + G IKG AY LK E GVHR Sbjct: 126 ANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P +DDS++IEI D +IDTYR+SGAGGQ VNTTDSA Sbjct: 186 VQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSA 245 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-------IANIGESS 302 VRITH+PTG+VV Q ERSQ N+ A +L++KLY+LE+QK+++ +A G+ S Sbjct: 246 VRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDRS 305 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + +IR+Y P V D R TS V++G L ++A L Sbjct: 306 E-------KIRTYNY-PQDRVTDHRIGYS-TSLKQVMEGKLLTIIEALLT 346 >gi|91786752|ref|YP_547704.1| peptide chain release factor 1 [Polaromonas sp. JS666] gi|119361575|sp|Q12F86|RF1_POLSJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91695977|gb|ABE42806.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas sp. JS666] Length = 373 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 102/246 (41%), Positives = 147/246 (59%), Gaps = 12/246 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ A++E+ AG GG ES +A L RMYTR+AE+ +++ E + E G K L + Sbjct: 111 DARAAFIEIRAGTGGDESALFAGDLFRMYTRFAERNRWQVEIISESPSELGGYKEVVLRM 170 Query: 173 KGPN------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 GP YG L+ E G HR+ R+ ++ R HTS ++ V P D+++ I+I+ + Sbjct: 171 DGPTDATGVGVYGKLRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDEAVAIQINPA 230 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +CQ +RSQH+NKA+A +L A++ E Sbjct: 231 DLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIVE 290 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 + + E A K +G G +IR+Y P + D R N+ +++GDL Sbjct: 291 KD--RSERAAKDAAMRKGLVGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDL 347 Query: 344 DDFMKA 349 D + A Sbjct: 348 GDVITA 353 >gi|308190290|ref|YP_003923221.1| peptide chain release factor 1 [Mycoplasma fermentans JER] gi|307625032|gb|ADN69337.1| peptide chain release factor 1 [Mycoplasma fermentans JER] Length = 371 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 126/350 (36%), Positives = 190/350 (54%), Gaps = 32/350 (9%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK--EIQDRLCDNLIL 72 +DN V++L +D + N+ E + +E + D A +F K +Q+ D ++ Sbjct: 29 YDNLVKKL-------DDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYNDAKVM 81 Query: 73 LELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + EE+ SI++E L +++ E+ + L E D + +E+ AGG E Sbjct: 82 INSKNEEEVLFAKSIIEENEVKLAQLEEEL---KILILPKDENDDKNVIMEIRGAAGGDE 138 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L +MYT++AE FK + + G IKG AY LK E GVHR Sbjct: 139 ANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVHR 198 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P +DDS++IEI D +IDTYR+SGAGGQ VNTTDSA Sbjct: 199 VQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDSA 258 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-------IANIGESS 302 VRITH+PTG+VV Q ERSQ N+ A +L++KLY+LE+QK+++ +A G+ S Sbjct: 259 VRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDRS 318 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + +IR+Y P V D R TS V++G L ++A L Sbjct: 319 E-------KIRTYNY-PQDRVTDHRIGYS-TSLKQVMEGKLLTIIEALLT 359 >gi|325002820|ref|ZP_08123932.1| peptide chain release factor 1 [Pseudonocardia sp. P1] Length = 358 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 122/343 (35%), Positives = 175/343 (51%), Gaps = 24/343 (6%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP + + ++A+ L + L + +++ D ELA E D S Sbjct: 16 LEQRLADPEVLADQVQARKLGKRYAQLGPVVRCARDLAQAREDRDAARELASE--DRSFA 73 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E R+ + DS+D +EV +G GG ES +A L+RMYTR+A Sbjct: 74 AEADALDVRVVELETELAELLVPRDPHDSDDVLMEVKSGEGGEESALFAGDLVRMYTRYA 133 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYGW--LKGEQGVHRLVRISPYDSNSR 201 E R +K E L + G K TL + K P W LK E GVHR+ R+ +S R Sbjct: 134 ESRGWKVELLGSTPSDLGGFKDVTLSVRSKDPAQGAWAALKFEGGVHRVQRVPVTESQGR 193 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS + + V+P D++ ++EI E D R+D +RASG GGQ VNTTDSAVRITH+P+G+VV Sbjct: 194 IHTSAAGVLVFPDADETPDVEIDEKDIRVDVFRASGHGGQSVNTTDSAVRITHLPSGIVV 253 Query: 262 QCQQERSQHKNKAQAWNMLRAKL---------YELELQKREEIANIGESSKTEIGWGRQI 312 CQ ERSQ +NKA+A ++LRA+L Q+R ++ + S + I Sbjct: 254 SCQNERSQLQNKARAMDVLRARLQAKAEAEAAEAASEQRRSQVRTVDRSER--------I 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P + D R + + S VLDG+L D A A + Sbjct: 306 RTYNF-PENRISDHRVGFKAHNLSSVLDGNLTDVFAALTAADR 347 >gi|85059854|ref|YP_455556.1| peptide chain release factor 1 [Sodalis glossinidius str. 'morsitans'] gi|119361611|sp|Q2NRS4|RF1_SODGM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|84780374|dbj|BAE75151.1| peptide chain release factor RF-1 [Sodalis glossinidius str. 'morsitans'] Length = 360 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 106/245 (43%), Positives = 147/245 (60%), Gaps = 12/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LEV AG GG E+ +A L RMY+R+AE R++K E + GE G K + Sbjct: 107 DERGCFLEVRAGTGGDEAALFAGDLFRMYSRYAETRRWKVEIVSASYGEHGGFKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 AYG LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D RIDT Sbjct: 167 SHEGAYGLLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L A+L E+Q+R Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGLVVECQDERSQHKNKAKALAVLGARLRAAEVQRR 286 Query: 293 EEIANIGESSKTE---IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ E S T +G G +IR+Y P V D R + +V++G LD Sbjct: 287 QQ-----EESSTRRNLLGSGDRSDRIRTYNF-PQGRVTDHRIGLTLYRLDEVIEGKLDML 340 Query: 347 MKATL 351 ++ + Sbjct: 341 IQPIM 345 >gi|114319440|ref|YP_741123.1| peptide chain release factor 1 [Alkalilimnicola ehrlichii MLHE-1] gi|119361505|sp|Q0AC04|RF1_ALHEH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114225834|gb|ABI55633.1| bacterial peptide chain release factor 1 (bRF-1) [Alkalilimnicola ehrlichii MLHE-1] Length = 361 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 109/282 (38%), Positives = 162/282 (57%), Gaps = 20/282 (7%) Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDA---YLEVHAGAGGTESQDWA 134 +DD I + + + + + +E + E +L D ND YLE+ AG GG E+ +A Sbjct: 71 DDDLEIREMAEEEISQAQARLEALEAELQVLLLPPDPNDGRNLYLEIRAGTGGDEAALFA 130 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ ++ E + +GE+ G K I G A+ LK E G HR+ R+ Sbjct: 131 GDLLRMYARYAERHGWRLEEISASEGEQGGYKEVITRISGEGAWSRLKFESGAHRVQRVP 190 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D +I I+ ++ R+DT+RASGAGGQHVN TDSA+RITH Sbjct: 191 ETESQGRIHTSACTVAVLPEPDAVEDITINPAELRVDTFRASGAGGQHVNKTDSAIRITH 250 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKL--------YELELQKREEIANIGESSKTEI 306 +PTGVVV+CQ ERSQHKN+AQA +L+A+L + ++R ++ G+ S+ Sbjct: 251 LPTGVVVECQSERSQHKNRAQALALLQARLKNAQQAEQSAQQTEQRRQLVGSGDRSE--- 307 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P + D R N+ ++L GDLD ++ Sbjct: 308 ----RIRTYNF-PQGRITDHRINLTLYRLEEILQGDLDQLVE 344 >gi|163793919|ref|ZP_02187893.1| Protein chain release factor A [alpha proteobacterium BAL199] gi|159181030|gb|EDP65547.1| Protein chain release factor A [alpha proteobacterium BAL199] Length = 356 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 107/246 (43%), Positives = 154/246 (62%), Gaps = 8/246 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD+ +A LEV AG GG E+ +A L MY R+A+ R ++ E +E+ + E G K A Sbjct: 104 EADARNAILEVRAGTGGDEAALFAADLFAMYQRYAQGRGWRFEVMEVSENEIGGYKEAIA 163 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G + + LK E GVHR+ R+ +S R HTS +++ V P ++ +++ I + D RI Sbjct: 164 TISGQSVFAHLKFESGVHRVQRVPATESQGRIHTSAATVAVLPEAEE-VDVAIDDKDLRI 222 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D YR+SGAGGQHVNTTDSAVRITH+PTGVVV Q E+SQHKN+A+A +LRA+L++ E Sbjct: 223 DVYRSSGAGGQHVNTTDSAVRITHLPTGVVVTQQDEKSQHKNRAKAMKILRARLFDQERT 282 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346 +R+ + K++IG G +IR+Y P V D R N+ V+ G+ LD+ Sbjct: 283 RRD--SERAADRKSQIGSGDRSERIRTYNF-PQGRVTDHRINLTLYKIDKVMSGEALDEI 339 Query: 347 MKATLA 352 + A +A Sbjct: 340 VDALIA 345 >gi|313202185|ref|YP_004040843.1| peptide chain release factor 1 [Methylovorus sp. MP688] gi|312441501|gb|ADQ85607.1| peptide chain release factor 1 [Methylovorus sp. MP688] Length = 356 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A L RMY+R+AE++++K E + + E G K I Sbjct: 103 DERNIFLEIRAGTGGDESALFAGDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKI 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E G HR+ R+ ++ R HTS ++ V P VD+ ++ I+ +D RIDT Sbjct: 163 EGFGAYSKLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH PTG+VV+CQ RSQH NKAQA +L A++ ++ Sbjct: 223 FRASGAGGQHINKTDSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVN-- 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + I ++ IG G +IR+Y P + D R N+ + +GD+D+ + A Sbjct: 281 EQQSKIASERRSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINA 339 >gi|312795903|ref|YP_004028825.1| peptide Chain Release Factor 1 (RF-1) [Burkholderia rhizoxinica HKI 454] gi|312167678|emb|CBW74681.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Burkholderia rhizoxinica HKI 454] Length = 365 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 149/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AG GG ES +A LLRMY R+AE+ +++ E + + G K + I Sbjct: 112 DERNIFVEIRAGTGGDESALFAGDLLRMYLRYAERHRWQVEMMSESASDLGGYKEVIVRI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ EIE++ +D RIDT Sbjct: 172 IGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIAEIELNPADLRIDT 231 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQHKNK +A +L A++ + + Q Sbjct: 232 FRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKDRAMKVLAARIKDKQYQ-- 289 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K+ +G G +IR+Y P + D R N+ ++DGDLD + A Sbjct: 290 EQHAKEAATRKSLVGSGDRSERIRTYNF-PQGRLTDHRINVTLYKLEQMMDGDLDALIDA 348 Query: 350 TLA 352 ++ Sbjct: 349 LVS 351 >gi|209516553|ref|ZP_03265407.1| peptide chain release factor 1 [Burkholderia sp. H160] gi|209502994|gb|EEA02996.1| peptide chain release factor 1 [Burkholderia sp. H160] Length = 360 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 148/243 (60%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+ +++ E + + + G + + I Sbjct: 107 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGDAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQTH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + K IG G +IR+Y P + D R N+ ++DGDLD+ + A Sbjct: 285 EQQTKEAATRKNLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAA 343 Query: 350 TLA 352 ++ Sbjct: 344 LVS 346 >gi|124515209|gb|EAY56720.1| Peptide chain release factor 1 [Leptospirillum rubarum] Length = 361 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 118/336 (35%), Positives = 184/336 (54%), Gaps = 8/336 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R ++ K DP + +N L R++ L +S + + L EL + + Sbjct: 19 ERYREISGKMADPEVSRNPAIYMKLARDQSELSAIVSLYEHYLRIIDQQKDLQELRQDPE 78 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWANMLLR 139 ++ + L +VE + +S+L E DS + +LE+ AGAGG E+ +A L R Sbjct: 79 FLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEEAALFARELAR 138 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ E++ F+ E +E +D E G + + ++G A+ LK E GVHR+ R+ ++ Sbjct: 139 MYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHRVQRVPVTEAG 198 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ + P + ++++I D RIDT+ AS AGGQ VNTT SAVRITH+PT + Sbjct: 199 GRIHTSTVTVAMIPEASE-VDVQIDPKDLRIDTFCASSAGGQSVNTTYSAVRITHLPTNI 257 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VV CQ ERSQ KNKA+A +LRA+L E E ++ E I K+++G G +IR+Y Sbjct: 258 VVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNE--QIASDRKSQVGTGDRSERIRTYN 315 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + V++G++D F+ A A Sbjct: 316 F-PQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRA 350 >gi|260467160|ref|ZP_05813338.1| peptide chain release factor 1 [Mesorhizobium opportunistum WSM2075] gi|259029084|gb|EEW30382.1| peptide chain release factor 1 [Mesorhizobium opportunistum WSM2075] Length = 359 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 113/281 (40%), Positives = 168/281 (59%), Gaps = 16/281 (5%) Query: 76 ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 AL E D ++E + LQ+ I+L + L AD +A LE+ AG GG E+ +A Sbjct: 77 ALAEADLPGVEERIEALQKDIQLLL-------LPRDAADDKNAILEIRAGTGGDEAALFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A + ++ E + DG+ G K I G + LK E GVHR+ R+ Sbjct: 130 GDLFRMYERYAAEHGWRFETVSASDGDAGGFKEIIATISGRGVFAHLKFESGVHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +++ R HTS +++ V P ++ ++I+I D RIDT RASG+GGQHVNTTDSAVRITH Sbjct: 190 ATEASGRIHTSAATVAVLPEAEE-VDIDIRAEDIRIDTMRASGSGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG++V Q E+SQH+N+A+A +LRA+LY++E K +E E+ K+++G G + Sbjct: 249 LPTGIMV-VQAEKSQHQNRAKAMQILRARLYDMERSKADE--ERSEARKSQVGSGDRSER 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P V D R N+ V+ G+LD+ + A +A Sbjct: 306 IRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEVIDALIA 345 >gi|241664381|ref|YP_002982741.1| peptide chain release factor 1 [Ralstonia pickettii 12D] gi|240866408|gb|ACS64069.1| peptide chain release factor 1 [Ralstonia pickettii 12D] Length = 360 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 103/243 (42%), Positives = 149/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AG GG ES +A LLRMYTR+AE+++++ E + + G K + Sbjct: 107 DHRNIFVEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ + P D +I+I+ +D RIDT Sbjct: 167 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A +L A+L + Q+R Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ IG G +IR+Y P V D R N+ ++DGDLD+ + A Sbjct: 285 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDAIMDGDLDELVGA 343 Query: 350 TLA 352 A Sbjct: 344 LAA 346 >gi|119715986|ref|YP_922951.1| peptide chain release factor 1 [Nocardioides sp. JS614] gi|166223579|sp|A1SHH9|RF1_NOCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119536647|gb|ABL81264.1| bacterial peptide chain release factor 1 (bRF-1) [Nocardioides sp. JS614] Length = 357 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 127/337 (37%), Positives = 187/337 (55%), Gaps = 22/337 (6%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P + AK L + L + I +E+Q D+ I L ++D + +E + Sbjct: 22 PETHADARLAKQLNQRYAALSSIIGAYRELQQ--LDDDIEAARELAQEDPAFAEEAAALT 79 Query: 93 QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R + EVE + L+ +A D DA LEV +G GG ES +A LLRMYTR+AE R +K Sbjct: 80 GR-RQEVEERLRRLLVPRDAADDKDAILEVKSGEGGEESALFAGDLLRMYTRYAEARGWK 138 Query: 152 TEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 E L+ + + G KS T+ +K G Y LK E GVHR+ R+ +S R HT Sbjct: 139 VEVLDAAESDLGGYKSVTVAVKAKGTPEPGEAPYALLKFEGGVHRVQRVPVTESQGRVHT 198 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S + + V P + ++++I E+D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ Sbjct: 199 SAAGVLVLPEAE-QVDVQIDENDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQ 257 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE---IGWGRQIRSYVLQPYQ 321 E+SQ +N+ QA +LR++L +K + A GE+ +++ + +IR+Y P Sbjct: 258 NEKSQLQNREQAMRILRSRLLAAAQEKAD--AEAGEARRSQVRTVDRSERIRTYNF-PEN 314 Query: 322 MVKDLRTNIEKTSPSDVLDGD----LDDFMKATLAIK 354 + D RT + + VLDGD LD ++A LA + Sbjct: 315 RISDHRTGYKAYNLDQVLDGDLQPVLDSCVEADLAAR 351 >gi|226315063|ref|YP_002774959.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599] gi|254790866|sp|C0Z828|RF1_BREBN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226098013|dbj|BAH46455.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599] Length = 358 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 114/323 (35%), Positives = 182/323 (56%), Gaps = 11/323 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQET 88 DP + + + L +E+ L+ ++ +E + ++ D +LE L+++ +++ Sbjct: 21 DPDVISDTKRLRELSKEQSSLEETVTTYREYKSVVSQIDDAKAMLEEKLDDEMREMVKLE 80 Query: 89 SDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + L K ++E + LL + D + +E+ AGG E+ +A +L RMYTR+AE+ Sbjct: 81 LNELSARKEQLEDRLKILLLPKDPNDEKNVIVEIRGAAGGDEAALFAAVLFRMYTRFAER 140 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 FK E LE + G K + G AY +K E G HR+ RI +S R HTS + Sbjct: 141 NAFKIEVLEASPTDIGGYKEIVFSLSGRGAYSKMKFESGAHRVQRIPATESGGRIHTSTA 200 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P +D +E+E+ E D RIDT+ +SGAGGQ VNTT SAVR+THIPTG++V CQ E+ Sbjct: 201 TVLVLPEAED-VEVEVHEKDIRIDTFCSSGAGGQSVNTTKSAVRVTHIPTGIMVSCQDEK 259 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQH NK +A +LRA+LY+ +Q++ A + K+ +G G +IR+Y P V Sbjct: 260 SQHSNKDKALRVLRARLYDFYMQQQN--AEADATRKSLVGTGDRSERIRTYNY-PQSRVT 316 Query: 325 DLRTNIEKTSPSDVLDGDLDDFM 347 D R + VL+G++D+ + Sbjct: 317 DHRIGLTLHRLESVLEGEMDEVI 339 >gi|149925825|ref|ZP_01914089.1| peptide chain release factor 1 [Limnobacter sp. MED105] gi|149825942|gb|EDM85150.1| peptide chain release factor 1 [Limnobacter sp. MED105] Length = 360 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 104/244 (42%), Positives = 147/244 (60%), Gaps = 6/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ AG GG ES +A L RMYTR+AE++ ++ E + + E G K + + Sbjct: 107 DHRNAMLEIRAGTGGDESALFAGDLFRMYTRYAERQGWQIEVMSASESELGGYKEVIIRL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS ++ V D++ IEI+ +D RIDT Sbjct: 167 AGDHVYKHLKFESGGHRVQRVPATESQGRIHTSACTVAVMAEPDEAEVIEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITH+PTG+VV+CQ ERSQHKNKA+A +L +L + ++ + Sbjct: 227 YRASGAGGQHINKTDSAVRITHLPTGLVVECQDERSQHKNKAKAMKVLNVRLQD-KIDRE 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A E ++ +G G +IR+Y P + D R N+ ++DGDL D M Sbjct: 286 RQAAEASE-RRSLVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDYIMDGDLTDLMNG 343 Query: 350 TLAI 353 A Sbjct: 344 LTAF 347 >gi|187930213|ref|YP_001900700.1| peptide chain release factor 1 [Ralstonia pickettii 12J] gi|238691828|sp|B2UDM7|RF1_RALPJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|187727103|gb|ACD28268.1| peptide chain release factor 1 [Ralstonia pickettii 12J] Length = 360 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 103/243 (42%), Positives = 149/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AG GG ES +A LLRMYTR+AE+++++ E + + G K + Sbjct: 107 DHRNIFVEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESPSDLGGYKEVIARL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D +I+I+ +D RIDT Sbjct: 167 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+VV+CQ +RSQH+NK +A +L A+L + Q+R Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ IG G +IR+Y P V D R N+ ++DGD+D+ + A Sbjct: 285 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDAIMDGDIDELVGA 343 Query: 350 TLA 352 A Sbjct: 344 LAA 346 >gi|304397559|ref|ZP_07379436.1| peptide chain release factor 1 [Pantoea sp. aB] gi|304354731|gb|EFM19101.1| peptide chain release factor 1 [Pantoea sp. aB] Length = 360 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 99/242 (40%), Positives = 148/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D ++EV AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DERACFIEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ D +IDT Sbjct: 167 TGDGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L ++++ E+ +R Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 A + + +G G + R+Y P V D R N+ +V++G LD ++ Sbjct: 287 H--AAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIEP 343 Query: 350 TL 351 + Sbjct: 344 IV 345 >gi|311279353|ref|YP_003941584.1| peptide chain release factor 1 [Enterobacter cloacae SCF1] gi|308748548|gb|ADO48300.1| peptide chain release factor 1 [Enterobacter cloacae SCF1] Length = 360 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 99/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A++EV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K + Sbjct: 107 DERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ EI+ ++ RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPEINPTELRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|319945454|ref|ZP_08019714.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599] gi|319741240|gb|EFV93667.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599] Length = 359 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 109/274 (39%), Positives = 158/274 (57%), Gaps = 10/274 (3%) Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E +D R++ E ++ L D+ +A LE+ AG GG ES +A LLRMY R+A Sbjct: 80 EEIADAETRLQATQERIEYLLLPRDPDDARNAILEIRAGTGGDESALFAGDLLRMYLRYA 139 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E R ++TE L + E G + + + G YG L+ E G HR+ R+ +S R HTS Sbjct: 140 EHRGWQTEILSASESELGGYREVIVQVSGQQVYGRLRYESGAHRVQRVPVTESQGRIHTS 199 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ V + + +IEIS D RID +RASGAGGQHVN T+SAVRITH+PTG+V +CQ Sbjct: 200 ACTVAVMAEAEPTGDIEISPDDLRIDVFRASGAGGQHVNKTESAVRITHLPTGIVAECQD 259 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 +RSQH+N+ +A +L +L + ++RE A K+ +G G +IR+Y P Sbjct: 260 DRSQHRNRDKAMTVLLTRLR--DARERERAAETSAHRKSLVGSGDRSERIRTYNF-PQGR 316 Query: 323 VKDLRTNIEKTSPSDVLDGDLDD----FMKATLA 352 + D R N+ ++DGDLD+ MKA LA Sbjct: 317 LTDHRINLTLYKLQTIIDGDLDELTDALMKARLA 350 >gi|288819151|ref|YP_003433499.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6] gi|288788551|dbj|BAI70298.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6] gi|308752735|gb|ADO46218.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6] Length = 357 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 109/245 (44%), Positives = 151/245 (61%), Gaps = 9/245 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E DS + LE+ AG GG E+ + LL MY ++AE+R +K L + G K Sbjct: 106 ERDSRNVILEIRAGVGGEEAALFVADLLNMYQKYAEERGWKFSILSANRTGLGGYKEVIA 165 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 LI+G AY LK E GVHR+ RI +S R HTS +++ V P VD++ E+EI+ D +I Sbjct: 166 LIEGVGAYSRLKYESGVHRVQRIPRTESGGRIHTSTATVAVLPEVDET-ELEINPQDLKI 224 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-EL 289 +T+RASGAGGQ+VNTT++AVR+THIPTG+ V CQ ERSQ +NK +A +L A+L + E Sbjct: 225 ETFRASGAGGQYVNTTETAVRVTHIPTGISVACQDERSQFQNKQKALKILYARLKDFYER 284 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 QK EEIA K ++G G +IR+Y P V D R N+ DVL+G LD+ Sbjct: 285 QKEEEIAK---ERKMQVGTGERSEKIRTYNF-PQGRVTDHRINLTLYKLHDVLEGKLDEI 340 Query: 347 MKATL 351 ++A + Sbjct: 341 IEALI 345 >gi|289207525|ref|YP_003459591.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix] gi|288943156|gb|ADC70855.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix] Length = 361 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 102/238 (42%), Positives = 148/238 (62%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +LE+ AG GG E+ +A LLRMYTR+AE++ +K E L +GE G + + Sbjct: 109 DNANVFLEIRAGTGGDEAAIFAGDLLRMYTRYAEQQNWKLEILSASEGEHGGYREVIARL 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P +D+ +I+ +D R+DT Sbjct: 169 AGQGAYSRLKFESGAHRVQRVPETESQGRIHTSAATVAILPELDEVEMPDINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSAVR+TH+PTG+VV+CQ+ERSQHKN+A+A L A+L+E E + + Sbjct: 229 FRASGAGGQHVNKTDSAVRLTHLPTGIVVECQEERSQHKNRAKAMTYLAARLFEAEREAQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + K+ +G G +IR+Y P V D R N+ V+ GDLD + Sbjct: 289 AAAQS--AERKSLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLEQVMAGDLDPVI 343 >gi|119945323|ref|YP_943003.1| peptide chain release factor 1 [Psychromonas ingrahamii 37] gi|166223592|sp|A1SV89|RF1_PSYIN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119863927|gb|ABM03404.1| bacterial peptide chain release factor 1 (bRF-1) [Psychromonas ingrahamii 37] Length = 363 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 147/240 (61%), Gaps = 2/240 (0%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AGAGG E+ +A L RMY+++AE + ++ E + + E+ G K I Sbjct: 109 DDRNCYLEIRAGAGGDEAAIFAGNLFRMYSKYAESKGWRVEVMNSNASEQGGYKELIAKI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG +K E G HR+ R+ +S R HTS ++ V P V ++ I I+ +D ++DT Sbjct: 169 DGEGAYGIMKFESGGHRVQRVPETESQGRIHTSACTVVVMPEVPEAEAISINPADLKVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291 +RASGAGGQHVN TDSAVR+TH+PTG VV+CQ +RSQHKN+AQA ++L+++L + E +K Sbjct: 229 FRASGAGGQHVNKTDSAVRLTHLPTGTVVECQDQRSQHKNRAQAMSVLQSRLQQAEDEKS 288 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E I S +IR+Y P V D R N+ ++VL+GDL+ + L Sbjct: 289 HAEEQTIRRSLVASGDRSERIRTYNY-PQGRVSDHRINLTVYRLNEVLEGDLNALHEPIL 347 >gi|88704041|ref|ZP_01101756.1| Peptide chain release factor 1 [Congregibacter litoralis KT71] gi|88701868|gb|EAQ98972.1| Peptide chain release factor 1 [Congregibacter litoralis KT71] Length = 361 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 116/320 (36%), Positives = 180/320 (56%), Gaps = 11/320 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ----E 87 DP + + + + L RE L+ + E Q+ L +L E L +DD + + E Sbjct: 25 DPGVISDQDQFRRLSREFSELETVVKCFGEYQE-LQGDLEAAESMLADDDADMREMAKTE 83 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 S+ R + Q L DS++ +LE+ AG GG E+ ++ L RMY+R+AE+ Sbjct: 84 ISEGEARREALEAELQLLLLPRDPKDSHNVFLEIRAGTGGDEAAIFSGDLQRMYSRFAER 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E L GE G K I+G + Y +LK E G HR+ R+ +S R HTS Sbjct: 144 QGWRIEVLSERPGEHGGYKEIISRIEGSDVYAYLKFESGAHRVQRVPETESQGRIHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ + ++ +EI+++D R+DTYRASGAGGQHVN TDSAVR+TH+PTG+VV+CQ ER Sbjct: 204 TVAILAEPEELEAVEINKADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKN+A+A ++L+AKL + + + + E + +G G +IR+Y P V Sbjct: 264 SQHKNRARAMSLLQAKLD--SVAEESQASEQAEQRRNLVGTGDRSDRIRTYNF-PQGRVT 320 Query: 325 DLRTNIEKTSPSDVLDGDLD 344 D R N+ +V+ GD++ Sbjct: 321 DHRINLTLYKLDEVMAGDME 340 >gi|283953774|ref|ZP_06371305.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 414] gi|283794815|gb|EFC33553.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 414] Length = 355 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DEKNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSMGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ V P VDD IEIEI+ +D ++D Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E +A E+ K+++G G +IR+Y P + D R N+ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320 >gi|195953354|ref|YP_002121644.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1] gi|229576658|sp|B4U955|RF1_HYDS0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|195932966|gb|ACG57666.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1] Length = 356 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 109/244 (44%), Positives = 150/244 (61%), Gaps = 9/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + LE+ AGAGG E+ +A LLRMY R+AE++ +K LE + G K + I Sbjct: 108 DSKNVILEIRAGAGGEEAALFAADLLRMYQRYAERKGWKFNILEANKTGLGGYKEVIVSI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E GVHR+ R+ +S R HTS ++ V P D++ ++ I+ D RI+T Sbjct: 168 EGKNVYSHLKYESGVHRVQRVPITESGGRIHTSTITVAVLPEADET-DVVINPQDLRIET 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQK 291 +RASGAGGQ+VNTT+SAVRITHIPTG+ + CQ ERSQ +NK +A +L A+L + E QK Sbjct: 227 FRASGAGGQYVNTTESAVRITHIPTGISISCQDERSQLQNKLKAMRILYARLKDFYEKQK 286 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +EE + K ++G G +IR+Y V D R N+ DVLDGDLDD + Sbjct: 287 KEE---TDKERKEQVGTGERSEKIRTYNFSQ-NRVTDHRINLTLHKLQDVLDGDLDDIIS 342 Query: 349 ATLA 352 + A Sbjct: 343 SLQA 346 >gi|266621433|ref|ZP_06114368.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479] gi|288866872|gb|EFC99170.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479] Length = 358 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 112/290 (38%), Positives = 169/290 (58%), Gaps = 20/290 (6%) Query: 79 EDDCSILQETSDN----LQRIKLEVEYKQFESL------LSGEADSND---AYLEVHAGA 125 ED +IL E +D L + +L KQ E+L L D ND LE+ AGA Sbjct: 59 EDSLAILDEENDEEMRELAKEELSDAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY ++E + +K E + +++ G K ++ G AY LK E Sbjct: 119 GGDEAALFAAELYRMYVNYSESQHWKVELISVNENGIGGFKEVVAMVTGKGAYSKLKYES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS +++ V P +D +++ I + DCRID RASG GGQ VNT Sbjct: 179 GVHRVQRVPETESGGRIHTSTATVAVMPEAED-VDVVIEDKDCRIDVMRASGNGGQCVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+THIPTG+V+ Q E+SQ +NK +A+ +LR+KLY++EL+KR+ + E +++ Sbjct: 238 TDSAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQN--SEAEERRSQ 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IG G +IR+Y P V D R + +++GD+ + + + +A Sbjct: 296 IGTGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDITELLDSLIA 344 >gi|297618446|ref|YP_003703605.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM 12680] gi|297146283|gb|ADI03040.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM 12680] Length = 355 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 154/242 (63%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +A L RMY+R+AEK+ +K + ++ + G K ++ Sbjct: 106 DEKNVIMEIRAGTGGEEAALFAADLFRMYSRYAEKQGWKVDIMDTSYSDLGGFKEIIFIV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ RI +S R HTS +++ V P ++ +E++I+ +D RID Sbjct: 166 EGRGAYSKLKFESGVHRVQRIPVTESGGRIHTSAATVAVLPEAEE-VEVDINPNDLRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVRITH+PTG+VV CQ E+SQHKNK +A +LR++L LEL++ Sbjct: 225 FCSSGPGGQSVNTTQSAVRITHLPTGIVVSCQDEKSQHKNKDKAMRVLRSRL--LELKRA 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A I ++ ++++G G +IR+Y P V D R N+ VL+G+LD+ ++A Sbjct: 283 EHEAEIADARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLHKLDVVLEGELDEIIEA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|253997606|ref|YP_003049670.1| peptide chain release factor 1 [Methylotenera mobilis JLW8] gi|253984285|gb|ACT49143.1| peptide chain release factor 1 [Methylotenera mobilis JLW8] Length = 360 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 105/264 (39%), Positives = 157/264 (59%), Gaps = 8/264 (3%) Query: 94 RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + KLE ++LL D + +LE+ AG GG ES +A L RMY+R+AE++ +K Sbjct: 86 KAKLEAIEAALQTLLLPKDPNDDKNIFLEIRAGTGGDESGLFAGDLYRMYSRYAERQGWK 145 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + ++GE G K I+G AY LK E G HR+ R+ ++ R HTS ++ + Sbjct: 146 VEVMSANEGEMGGYKEIIAKIEGYGAYSKLKFESGGHRVQRVPDTETQGRIHTSACTVAI 205 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P D+ ++ I+ +D RIDT+RASGAGGQH+N TDSAVR+TH PTG+VV+CQ+ RSQH Sbjct: 206 LPEADEVSDVVINPADVRIDTFRASGAGGQHINKTDSAVRLTHAPTGIVVECQEGRSQHA 265 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328 NKAQA+ +L A++ ++ E+ + I K+ IG G +IR+Y P + D R Sbjct: 266 NKAQAFAVLAARIKAKQVD--EQQSKIASERKSLIGSGDRSERIRTYNY-PQGRITDHRI 322 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 N+ + +GD+D+ + A A Sbjct: 323 NLTLYKIDAITEGDMDELIGALAA 346 >gi|300871300|ref|YP_003786173.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000] gi|300689001|gb|ADK31672.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000] Length = 358 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 143/240 (59%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG ES + L RMY+R+ E+ FK E ++I E G K + Sbjct: 108 DGKNIIVEIRVGTGGDESALFVGDLFRMYSRFIERANFKMEIIDISPTELGGYKEVIFSV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G NAY LK E G HR+ RI +S R HTS S++ + P ++S ++ I + D R+D Sbjct: 168 SGKNAYRTLKFESGTHRVQRIPATESGGRIHTSASTVAIMPEAEES-DVIIKDEDIRVDI 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVRITH+PTG+VVQCQ E+SQHKNKA+A +LRA++YE E +R Sbjct: 227 FRSSGPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +IG G +IR+Y P V D R N+ +DG++ + A Sbjct: 287 K--AKEDKERRDKIGSGDRSERIRTYNF-PQNRVTDHRINVTLYKLDRFMDGEITEITDA 343 >gi|312194810|ref|YP_004014871.1| peptide chain release factor 1 [Frankia sp. EuI1c] gi|311226146|gb|ADP79001.1| peptide chain release factor 1 [Frankia sp. EuI1c] Length = 360 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 118/317 (37%), Positives = 175/317 (55%), Gaps = 17/317 (5%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + + DP + +V EA+ L R L + +EI+ D ELA+E D S Sbjct: 13 AVIEKRLADPAVHNDVGEARALGRRYAELAPIVELAREIEQANGDLETARELAVE--DPS 70 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSG--EADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E +D ++ ++ +LL+ D DA LEV AGAGG ES +A LLRMY Sbjct: 71 FRAEVTD--LETAIQDRRQRLRTLLAPTDPDDGRDAILEVKAGAGGEESALFAGDLLRMY 128 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIK--------GPNAYGWLKGEQGVHRLVRI 193 R+AE+R +KTE LE + + G + ++ +K P YG L+ E GVHR+ R+ Sbjct: 129 LRYAERRGWKTEILEANPSDLGGYRDVSVAVKYRGQVPPGQPGVYGRLRFEGGVHRVQRV 188 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS + + V P ++ ++++I +D RID +R+SG GGQ VNTTDSAVRIT Sbjct: 189 PVTESAGRIHTSAAGVLVMPEAEE-VDVQIDPNDLRIDVFRSSGPGGQSVNTTDSAVRIT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQI 312 H+PTGVVV CQ E+SQ +NK A +LRA+L + +K E + +S+ + ++ Sbjct: 248 HVPTGVVVSCQNEKSQLQNKESALRILRARLLTVAREKAESEKSAARASQVRTMDRSDKV 307 Query: 313 RSYVLQPYQMVKDLRTN 329 R+Y P + D R N Sbjct: 308 RTYNF-PENRIADHRVN 323 >gi|332188246|ref|ZP_08389974.1| peptide chain release factor 1 [Sphingomonas sp. S17] gi|332011745|gb|EGI53822.1| peptide chain release factor 1 [Sphingomonas sp. S17] Length = 357 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 104/245 (42%), Positives = 150/245 (61%), Gaps = 9/245 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG E+ +A L RMY R+AE++ ++ E + + G K Sbjct: 106 ADERAAMLEIRAGTGGDEAALFAGDLFRMYQRYAERQGWRVEVISASIPDTGGYKEVVAS 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +S R HTS +++ V P ++ ++++I + D RID Sbjct: 166 VAGAGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEE-VDLQIDDKDLRID 224 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YR+SGAGGQHVNTTDSA+RITHIPTG+VV Q ERSQHKN+A+A +LR +LYE E Sbjct: 225 IYRSSGAGGQHVNTTDSAIRITHIPTGLVVIQQDERSQHKNRAKAMKVLRTRLYEAE--- 281 Query: 292 REEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 RE + A + ++ +G G +IR+Y P V D R N+ ++L+G+LD+ + Sbjct: 282 RERLAAERAGTRRSMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGELDELI 340 Query: 348 KATLA 352 A LA Sbjct: 341 GALLA 345 >gi|254468209|ref|ZP_05081615.1| peptide chain release factor 1 [beta proteobacterium KB13] gi|207087019|gb|EDZ64302.1| peptide chain release factor 1 [beta proteobacterium KB13] Length = 358 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 147/240 (61%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A L RMYTR+AE+ + E + ++ G K I Sbjct: 107 DDKNIFLEIRAGTGGDESALFAADLYRMYTRYAERNNWNVEVISSNESGLGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ +++I+ +D RIDT Sbjct: 167 NGDGAYSKLKFESGGHRVQRVPDTETQGRIHTSACTVAVLPEADEIEDVDINPADIRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITH PTG+VV+CQ +RSQH+NKAQA ++L AK+ + ++Q + Sbjct: 227 YRASGAGGQHINKTDSAVRITHEPTGIVVECQDDRSQHRNKAQAMSILAAKIKDNQIQAQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + K+ IG G +IR+Y P + D R N+ ++DGDL++ + A Sbjct: 287 Q--SQRASERKSLIGSGDRSERIRTYNF-PQGRITDHRINLTLYKIDFIMDGDLEEMINA 343 >gi|152986475|ref|YP_001350646.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7] gi|166223587|sp|A6VC61|RF1_PSEA7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|150961633|gb|ABR83658.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7] Length = 360 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 149/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ ++ L RMY+R+AE++ ++ E L ++GE G K + Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ +D R+DT Sbjct: 169 EGENVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVN TDSAVRITH+P+G+VV+CQ+ERSQHKN+A+A L AKL + + Sbjct: 229 YRSSGAGGQHVNKTDSAVRITHLPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + K +G G +IR+Y P V D R N+ S +V++G ++ ++ Sbjct: 289 QQAIA--STRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEP 345 Query: 350 TL 351 L Sbjct: 346 LL 347 >gi|88596258|ref|ZP_01099495.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 84-25] gi|88191099|gb|EAQ95071.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 84-25] Length = 355 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLIKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ V P VDD IEIEI+ +D ++D Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E +A E+ K+++G G +IR+Y P + D R N+ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320 >gi|153952433|ref|YP_001398893.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei 269.97] gi|166223543|sp|A7H5W3|RF1_CAMJD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|152939879|gb|ABS44620.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei 269.97] Length = 355 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ V P VDD IEIEI+ +D ++D Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQEN 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E +A E+ K+++G G +IR+Y P + D R N+ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320 >gi|302339534|ref|YP_003804740.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293] gi|301636719|gb|ADK82146.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293] Length = 355 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 111/271 (40%), Positives = 166/271 (61%), Gaps = 16/271 (5%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 L+E D+L++ + K+ ++LL + D + +E+ AG GG E+ +A L RMY+ Sbjct: 81 LEELKDHLEKSE-----KRLKTLLVPKDPLDGKNTIIEIRAGTGGDEASLFAADLYRMYS 135 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R++E++ +K E +E D E G K I G YG L+ E GVHR+ R+ +S R Sbjct: 136 RFSEQKGWKLEMMESSDTEVGGFKEVIFSISGKEVYGNLRYESGVHRVQRVPSTESQGRI 195 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS ++ V P + + +I+IS D +ID +R+SG GGQ VNTTDSAVR+THIPTGVVV Sbjct: 196 HTSAVTVAVLPEAEKT-DIDISPEDLKIDVFRSSGPGGQSVNTTDSAVRVTHIPTGVVVT 254 Query: 263 CQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 CQ E+SQ KNKA+A +LRA+LYE E+++R+E ++ K++IG G +IR+Y Sbjct: 255 CQDEKSQLKNKAKALRVLRARLYEAEEMKQRKE---RDQARKSQIGSGDRSERIRTYNF- 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R N+ V++G L++ + A Sbjct: 311 PQNRVTDHRINLTLYKLDQVMEGALNELIDA 341 >gi|300176358|emb|CBK23669.2| unnamed protein product [Blastocystis hominis] Length = 244 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 96/214 (44%), Positives = 139/214 (64%), Gaps = 3/214 (1%) Query: 136 MLLRMYTRWAEKRKFKTEAL-EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLL MYT +A+K +K + + ++ DG+ S+ L ++G + +L E GVHRLVRIS Sbjct: 1 MLLAMYTSFAQKMNWKCKLISKLDDGDSC--HSSILKLEGDDLASYLSLESGVHRLVRIS 58 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D N RRHTSF+S+ V PV + + + I ++ +ID +R+SG GGQHVN T+SAVR+TH Sbjct: 59 PFDKNQRRHTSFASVSVSPVPEAASSLRILPTELQIDRFRSSGPGGQHVNKTESAVRVTH 118 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +P+G+V +CQ ER+QH+N A M+++KL E +K E + K W QIRS Sbjct: 119 LPSGIVAECQAERNQHQNLEIAMEMVKSKLLLREAEKEAEKKQEDHARKDVNAWSSQIRS 178 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 YVL PY+MVKD R +E+ +L GDL F++ Sbjct: 179 YVLHPYKMVKDHRFGVEEGDVEKILGGDLKGFVE 212 >gi|86152274|ref|ZP_01070485.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 260.94] gi|121613478|ref|YP_001001255.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 81-176] gi|148925756|ref|ZP_01809444.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CG8486] gi|157415831|ref|YP_001483087.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 81116] gi|166223544|sp|A1W1L4|RF1_CAMJJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|172047202|sp|A8FNS3|RF1_CAMJ8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|85840763|gb|EAQ58014.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 260.94] gi|87249710|gb|EAQ72669.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 81-176] gi|145845766|gb|EDK22857.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CG8486] gi|157386795|gb|ABV53110.1| peptide chain release factor RF-1 [Campylobacter jejuni subsp. jejuni 81116] gi|307748468|gb|ADN91738.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni M1] gi|315931656|gb|EFV10617.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 327] Length = 355 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ V P VDD IEIEI+ +D ++D Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E +A E+ K+++G G +IR+Y P + D R N+ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320 >gi|320160374|ref|YP_004173598.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1] gi|319994227|dbj|BAJ62998.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1] Length = 357 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 106/255 (41%), Positives = 158/255 (61%), Gaps = 9/255 (3%) Query: 98 EVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 EV K+ ++LL D + +E+ AG GG E+ +A L RMY+R+AEKR + E + Sbjct: 86 EVLEKELKTLLIPKDPRDERNVIVEIRAGTGGEEAALFAGDLFRMYSRYAEKRGWSVEII 145 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 ++ G K ++KG AY LK E GVHR+ RI +S+ R HTS +++ V V Sbjct: 146 SQNETGIGGYKEIIFMVKGKGAYSRLKYESGVHRVQRIPVTESSGRIHTSTATVAVLAEV 205 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D+ ++I I +SD I+ YR++GAGGQ+V +AVRITH+PTG+VV CQ ERSQ +NK + Sbjct: 206 DE-VDINIPDSDLEIEVYRSAGAGGQNVQKNSTAVRITHLPTGIVVACQDERSQLQNKLR 264 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332 A ++LRAKLYE+E QKR++ + + ++++G G +IR+Y P V D R I Sbjct: 265 AMSILRAKLYEIEEQKRQQ--ELDATRRSQVGTGERAEKIRTYNF-PQSRVTDHRIGISS 321 Query: 333 TSPSDVLDGDLDDFM 347 + VLDG++D F+ Sbjct: 322 YNLPAVLDGEIDLFI 336 >gi|315125019|ref|YP_004067023.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018741|gb|ADT66834.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 355 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ V P VDD IEIEI+ +D ++D Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E +A E+ K+++G G +IR+Y P + D R N+ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320 >gi|256380143|ref|YP_003103803.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827] gi|255924446|gb|ACU39957.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827] Length = 354 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 123/336 (36%), Positives = 181/336 (53%), Gaps = 9/336 (2%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L TK DP + + A+ L + L + +E++ D ELA E D + Sbjct: 15 LETKLADPSVHADQAGARKLGKRYAELTPIVRAARELEQTRNDLGAARELAGE--DPAFA 72 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E + RI E L DS+D +E+ +G GG ES +A LLRMY R+A Sbjct: 73 EEADELSARIPQLEERLTELLLPRDPHDSSDVVMEIKSGEGGEESALFAGDLLRMYLRYA 132 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIK----GPNA-YGWLKGEQGVHRLVRISPYDSNS 200 E++ +K E L+ D + G K T+ IK GP+ + LK E GVHR+ R+ +S Sbjct: 133 ERQGWKAEVLDGTDSDLGGFKDVTVAIKSRGDGPDGVWSRLKYEGGVHRVQRVPVTESQG 192 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS + + V P +D IEI + D R+D +R+SG GGQ VNTTDSAVRITH+PTG+V Sbjct: 193 RIHTSAAGVLVIPETEDVASIEIDDKDLRVDVFRSSGKGGQSVNTTDSAVRITHLPTGIV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQP 319 V CQ ERSQ +NKA+A +L+A+L L +K ++ A+ ++ + ++R+Y P Sbjct: 253 VSCQNERSQLQNKARAMQVLQARLQALAEEKAQQEASDARRTQVRTVDRSERVRTYNF-P 311 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + D R + + VLDG+LD + A A + Sbjct: 312 ESRISDHRVGYKAHNLDAVLDGELDAVLDALSAADR 347 >gi|224827212|ref|ZP_03700307.1| peptide chain release factor 1 [Lutiella nitroferrum 2002] gi|224600605|gb|EEG06793.1| peptide chain release factor 1 [Lutiella nitroferrum 2002] Length = 358 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 97/243 (39%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A LLRMYTR+AE+ +++ E + + + G K + + Sbjct: 107 DEKNIFLEIRAGTGGDEAALFAGDLLRMYTRFAERNRWQAEIVSSSESDLGGYKEVIVRL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A+ LK E G HR+ R+ ++ R HTS ++ V P ++ E+ ++ +D RIDT Sbjct: 167 VGFGAFSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEAEEIAEVVLNPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITH+PTG+V +CQ RSQH NKA A +L A++Y+++L+ + Sbjct: 227 FRASGAGGQHINKTDSAVRITHLPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLRAQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ ++ K+ IG G +IR+Y P + D R N+ V+DGDL + A Sbjct: 287 QQ--SVAAERKSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKLDQVMDGDLFELTDA 343 Query: 350 TLA 352 +A Sbjct: 344 LIA 346 >gi|86149291|ref|ZP_01067522.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|218563201|ref|YP_002344981.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|20139359|sp|Q9PM63|RF1_CAMJE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|85840073|gb|EAQ57331.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|112360908|emb|CAL35709.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926807|gb|ADC29159.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni IA3902] gi|315927641|gb|EFV06972.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929077|gb|EFV08310.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 305] Length = 355 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ V P VDD IEIEI+ +D ++D Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E +A E+ K+++G G +IR+Y P + D R N+ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320 >gi|295688344|ref|YP_003592037.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756] gi|295430247|gb|ADG09419.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756] Length = 356 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/241 (44%), Positives = 152/241 (63%), Gaps = 11/241 (4%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A LEV AG GG E+ +A L RMY R+A+ ++ E I +GE G K I G Sbjct: 107 AILEVRAGTGGDEAALFAGDLFRMYQRYAQLHGWRVEIDSISEGEMGGYKEIVASITGDG 166 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 +G LK E GVHR+ R+ ++ R HTS +++ V P +D +EI+I ESD RIDTYR+S Sbjct: 167 VFGRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAED-VEIDIKESDLRIDTYRSS 225 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQHVN TDSAVRITH+PTGVVV E+SQH+N+A+A L+A+LY+++ RE + Sbjct: 226 GAGGQHVNKTDSAVRITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQ---REALD 281 Query: 297 NI-GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 + E+ K+++G G +IR+Y P V D R N+ + S +++GD LDD + + Sbjct: 282 SARSEARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYNLSRIMEGDALDDVINPLI 340 Query: 352 A 352 A Sbjct: 341 A 341 >gi|218960517|ref|YP_001740292.1| peptide chain release factor RF-1 [Candidatus Cloacamonas acidaminovorans] gi|167729174|emb|CAO80085.1| peptide chain release factor RF-1 [Candidatus Cloacamonas acidaminovorans] Length = 355 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/240 (41%), Positives = 153/240 (63%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +E+ AG GG E+ +A L RMY+ +AE + +K E + ++ E G K + Sbjct: 108 DAKNAIVEIRAGTGGEEAALFAADLFRMYSYYAEMKGWKLEVISMNQTELGGYKEIIFQL 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y +++ E GVHR+ RI +S+ R HTS ++ V P +D I+I+I ESD RID Sbjct: 168 SGKDVYSYMRFESGVHRVQRIPVTESSGRIHTSAVTVAVLPEAED-IDIDIQESDLRIDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR++G GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNKA+A +LR++L + E+ ++ Sbjct: 227 YRSTGHGGQSVNTTDSAVRITHLPTGIVVTCQDEKSQIKNKAKALKVLRSRLLDEEISRQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ I ++ K ++ G +IR+Y P V D R N+ + L G++++F++A Sbjct: 287 EQ--EIAKARKAQVSTGDRSAKIRTYNF-PQSRVTDHRINLTSYNLDSFLAGNIEEFIQA 343 >gi|297182853|gb|ADI19004.1| protein chain release factor a [uncultured alpha proteobacterium HF0070_05I22] Length = 334 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 109/280 (38%), Positives = 164/280 (58%), Gaps = 9/280 (3%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEAD 113 I ++ ++ L D + ++ A +D+ + E L +RI +E E Q L + D Sbjct: 49 IELVRALESELKDAITMVVEAAGDDEMQAMAEAEVTLLKERIPIEKERLQLLLLPKDKDD 108 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 S +A LEV AG GG E+ + L MY R+A K ++ E +E+ + G K AT I Sbjct: 109 SRNAILEVRAGTGGDEAALFGANLFSMYQRFAAKNGWRFEVMEVSETGIGGYKEATATIS 168 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G + + LK E GVHR+ R+ ++ R HTS +++ V P ++ ++I+I E+D RID + Sbjct: 169 GIDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-VDIDIDENDLRIDVF 227 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQHKN+A+A +LRA+LY+ E + E Sbjct: 228 RSSGPGGQSVNTTDSAVRITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVE 287 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 + + K ++G G +IR+Y P V D R N+ Sbjct: 288 --SERAAARKGQVGSGDRSERIRTYNF-PQGRVTDHRINL 324 >gi|283956995|ref|ZP_06374467.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 1336] gi|283791496|gb|EFC30293.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 1336] Length = 355 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ V P VDD IEIEI+ +D ++D Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E +A E+ K+++G G +IR+Y P + D R N+ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320 >gi|114567903|ref|YP_755057.1| peptide chain release factor 1 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|119361631|sp|Q0AUB8|RF1_SYNWW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114338838|gb|ABI69686.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 355 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 106/244 (43%), Positives = 149/244 (61%), Gaps = 9/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +E+ AG GG E+ +A L RMY+R+AE++ +K E ++ H + GIK ++ Sbjct: 106 DEKSVIMEIRAGTGGEEAALFAGDLFRMYSRYAEEQGWKIEIMDTHYTDIGGIKEIVFVV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ RI +S R HTS +++ V P ++ +E+ I +D RID Sbjct: 166 DGRGAYSKLKFESGVHRVQRIPVTESGGRIHTSAATVAVLPEAEE-VEVAIDPNDLRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 Y +SG GGQ VNTT SAVRITH+PTG VV CQ E+SQHKNKA+A +LRA+L E LE +K Sbjct: 225 YCSSGPGGQSVNTTQSAVRITHVPTGEVVTCQDEKSQHKNKAKALRVLRARLKELLEEEK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E+A + K ++G G +IR+Y P V D R N+ VL+G L++ + Sbjct: 285 NAEMAG---TRKNQVGSGDRSERIRTYNF-PQGRVSDHRINLTLHRLESVLEGRLEEIIN 340 Query: 349 ATLA 352 A +A Sbjct: 341 ALIA 344 >gi|260755553|ref|ZP_05867901.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870] gi|260675661|gb|EEX62482.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870] Length = 342 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 115/297 (38%), Positives = 170/297 (57%), Gaps = 19/297 (6%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 53 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 109 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 110 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVS 169 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 170 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 229 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 230 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 287 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 288 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINL 341 >gi|86152633|ref|ZP_01070838.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843518|gb|EAQ60728.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 355 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 99/221 (44%), Positives = 138/221 (62%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ V P VDD IEIEI+ +D ++D Sbjct: 164 KGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-IEIEINPNDLKVDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E +A E+ K+++G G +IR+Y P + D R N+ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINL 320 >gi|167993219|ref|ZP_02574314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205328702|gb|EDZ15466.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 360 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 100/235 (42%), Positives = 146/235 (62%), Gaps = 6/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E K Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKC 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 287 QQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 338 >gi|24212814|ref|NP_710295.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai str. 56601] gi|45656013|ref|YP_000099.1| peptide chain release factor 1 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|32171561|sp|Q8F9S6|RF1_LEPIN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|59798055|sp|Q72W38|RF1_LEPIC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|24193465|gb|AAN47313.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai str. 56601] gi|45599246|gb|AAS68736.1| peptide chain release factor 1 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 354 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 109/261 (41%), Positives = 156/261 (59%), Gaps = 11/261 (4%) Query: 95 IKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +KLE ++FE LL D N +E+ AG GG E+ + L RMY+++A+K+K K Sbjct: 83 LKLETLEREFEILLL-PPDPNSGKNILVEIRAGTGGEEAGLFVADLFRMYSKFADKQKIK 141 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 TE ++ G+K ++ AY K E G HR+ RI +S R HTS ++ V Sbjct: 142 TEIIDSSPTGIGGLKEIIFALEDDRAYDLFKFEGGTHRVQRIPSTESGGRIHTSAVTVAV 201 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P D+ E++I+ESD RID YR+SGAGGQHVNTTDSAVRITHIPTGVVV CQ E+SQHK Sbjct: 202 LPEADEE-EVQINESDLRIDVYRSSGAGGQHVNTTDSAVRITHIPTGVVVACQDEKSQHK 260 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328 NKA+A +L A++ E + + +++ ++ K IG G ++R+Y P D R Sbjct: 261 NKAKALRILSARILEKQAEDKKQASDA--IKKQMIGSGDRSERVRTYNF-PQGRCTDHRI 317 Query: 329 NIEKTSPSDVLDGDLDDFMKA 349 + S +++GDLD+ + A Sbjct: 318 GFTSHNLSAIMEGDLDELIGA 338 >gi|319760481|ref|YP_004124419.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str. BVAF] gi|318039195|gb|ADV33745.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str. BVAF] Length = 360 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 128/349 (36%), Positives = 192/349 (55%), Gaps = 33/349 (9%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-------KEI--QDRLCDNLI 71 +R L E P+ QN + + +E HL + +++ KEI + ++ Sbjct: 15 ERFYKLKQLIEHPNHIQNNKDFHSISKEYAHLAHIVTYFEQWLNIQKEILHTKEILTDID 74 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY---LEVHAGAGGT 128 L +LAL D+ L +NL++ K+++ L D ND Y +E+ AG GG Sbjct: 75 LHDLAL--DELKKLNIIENNLEK-KIKI--------LLLPTDPNDKYGCFIELRAGTGGK 123 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ ++ L RMYTR+AE +++ E + GE G K I AY LK E G H Sbjct: 124 EAAIFSGELFRMYTRYAETQRWNIEIIHATYGEYGGYKEIIAKISCNGAYNQLKFESGGH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ V P + D I+ +D RIDT+R+SGAGGQHVNTTDS Sbjct: 184 RVQRVPYTESQGRIHTSTCTVAVIPKIPDIKLPNINPNDLRIDTFRSSGAGGQHVNTTDS 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEI 306 A+RITHIP+G+ V+CQ ERSQHKNK++A ++LR++LY + +++R+ I ES+ + I Sbjct: 244 AIRITHIPSGLSVECQDERSQHKNKSKALSILRSRLYAMNIKRRK----IEESNFRRNLI 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G G +IR+Y Q + V D R + SDV+DG L +K + Sbjct: 300 GSGDRSDRIRTYNFQQGR-VTDHRIDFTSYKLSDVMDGALGILIKPIIC 347 >gi|206890162|ref|YP_002248216.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii DSM 11347] gi|238054474|sp|B5YIQ7|RF1_THEYD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|206742100|gb|ACI21157.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 353 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 118/328 (35%), Positives = 183/328 (55%), Gaps = 12/328 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC---SILQET 88 DP ++ N E RE+ L+ ++ +E + R+ + E ++ D + +E Sbjct: 21 DPKVFSNKDEYMKYSREQAELEPIVTKFREYK-RILKQIEEAEEMIKSGDPDLKELAEEE 79 Query: 89 SDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 L++IK ++E + LL + D + LE+ AG GG E+ +A L RMY ++AE Sbjct: 80 LQQLKKIKPQIEQELKVLLLPKDPRDEKNVILEIRAGTGGEEAALFAANLFRMYAKYAES 139 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + +K E ++ H G K I G A+ LK E GVHR+ RI +++ R HTS + Sbjct: 140 KGWKVEIIDSHPTGLGGFKEIIATISGKGAFSKLKYESGVHRVQRIPVTEASGRIHTSTA 199 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P ++ ++I+I E D RIDT+ +SG GGQ VNT SAVRI HIPTG++VQCQ ER Sbjct: 200 TVAVLPEAEE-VDIKIDEKDLRIDTFCSSGPGGQSVNTAYSAVRIVHIPTGIIVQCQDER 258 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQ KN+ +A +LRA+L E+E QK+E A K ++G G +IR+Y P V Sbjct: 259 SQIKNREKAMKVLRARLLEIERQKKE--AERAAERKGQVGTGERSERIRTYNF-PQNRVT 315 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R + VL+G++D+ + A ++ Sbjct: 316 DHRIGLTLYKLEQVLNGNIDEIIDALIS 343 >gi|154252199|ref|YP_001413023.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1] gi|171769599|sp|A7HTY3|RF1_PARL1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|154156149|gb|ABS63366.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1] Length = 355 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 116/287 (40%), Positives = 166/287 (57%), Gaps = 20/287 (6%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + E+A EE + ++ L R++ EV Q L AD + LEV AG GG E+ Sbjct: 69 MAEMAKEE-----IARLNEELPRLEHEV---QLMLLPKDAADDRNVILEVRAGTGGDEAA 120 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A + +K E + +GE G K I GP Y LK E GVHR+ Sbjct: 121 LFAGDLFRMYERYASNQGWKVELIAASEGEMGGYKEIIAGISGPGVYAKLKFESGVHRVQ 180 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ + R HTS +++ V P ++ +++EI + D RID YRASGAGGQHVN T+SAVR Sbjct: 181 RVPVTEGGGRIHTSAATVAVLPEAEE-VDVEIEDKDLRIDVYRASGAGGQHVNKTESAVR 239 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK--REEIANIGESSKTEIGWG 309 ITH+PTG+VV Q E+SQHKNKA+A +LRA++++ E ++ RE A + K ++G G Sbjct: 240 ITHLPTGIVVAQQDEKSQHKNKARAMQILRARIFDAERERLDRERSA----ARKGQVGSG 295 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 +IR+Y P V D R N+ VL+G+ L + + A +A Sbjct: 296 DRSERIRTYNF-PQSRVTDHRINLTLHKLDQVLEGEALGELIDALIA 341 >gi|84503529|ref|ZP_01001580.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597] gi|84388019|gb|EAQ01067.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597] Length = 349 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 112/280 (40%), Positives = 165/280 (58%), Gaps = 12/280 (4%) Query: 80 DDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 DD + + +QR++ ++ + Q L ADS A +E+ G GG E+ +A Sbjct: 63 DDPEMRALADEEIQRLRHDLPELEQALQIALLPKDAADSRPAMIEIRPGTGGDEAALFAG 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LLRMY R++E R ++ + +E+++ E GIK ++G N + LK E GVHR+ R+ Sbjct: 123 DLLRMYQRYSEARGWRFQVVELNETELGGIKEVVANVQGENVFARLKFESGVHRVQRVPE 182 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ V P +D ++I+I S+ RIDT RASGAGGQHVNTTDSAVRITH+ Sbjct: 183 TESGGRIHTSAATVAVLPEAED-VDIQIDPSEIRIDTMRASGAGGQHVNTTDSAVRITHV 241 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV E+SQH+N+A A +LR +L++LE QK + K ++G G +I Sbjct: 242 PTGIVV-VSSEKSQHQNRAIAMQVLRTRLFDLERQKAADARA--ADRKAQVGTGDRSERI 298 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+Y P V D R N+ V+ GDLD+ + A A Sbjct: 299 RTYNF-PQGRVTDHRINLTLYRLDQVMQGDLDEVIDALTA 337 >gi|118594305|ref|ZP_01551652.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181] gi|118440083|gb|EAV46710.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181] Length = 359 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 98/238 (41%), Positives = 148/238 (62%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AGAGG ES +A + RMY+R+AE+ +++ E + ++ E G K + Sbjct: 107 DEKNIFLEIRAGAGGDESALFAGDIFRMYSRYAERMRWQLEVISSNESEVGGFKEIIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V D+ +++I+ +D RIDT Sbjct: 167 IGQGAYSKLKFESGGHRVQRVPDTETQGRIHTSACTVAVLAEADEISDVDINPADIRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITH PTG+VV+CQ +RSQH+NKAQA ++L A++ + ++ + Sbjct: 227 YRASGAGGQHINKTDSAVRITHAPTGIVVECQDDRSQHRNKAQAMSILAARIKDAQINDQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + I K+ IG G +IR+Y P + D R N+ V+DGDL + + Sbjct: 287 Q--SKIATERKSLIGSGDRSERIRTYNF-PQGRITDHRINLTLYKIDFVMDGDLTELI 341 >gi|260891992|ref|YP_003238089.1| peptide chain release factor 1 [Ammonifex degensii KC4] gi|260864133|gb|ACX51239.1| peptide chain release factor 1 [Ammonifex degensii KC4] Length = 355 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 105/243 (43%), Positives = 153/243 (62%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A LLRMY R+AEKR +KTE L + G K +LI Sbjct: 106 DEKNVILEIRAGTGGEEAALFAADLLRMYLRYAEKRGWKTELLSASPTDLGGFKEVVVLI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY +LK E GVHR+ R+ +++ R HTS +++ V P ++ +++EI D R+DT Sbjct: 166 EGRGAYSFLKYESGVHRVQRVPVTEASGRIHTSAATVAVLPEAEE-VDVEIDPKDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVRITH+PTG+VV CQ ERSQ KN+ +A +LRA+L L+L++R Sbjct: 225 FCSSGHGGQSVNTTYSAVRITHLPTGIVVTCQDERSQLKNREKAMKVLRARL--LDLKRR 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A I + ++ G ++R+Y P V D R N+ ++L+GDLD+ + A Sbjct: 283 EQEAAIAAERRAQVKSGDRSERVRTYNF-PQNRVTDHRINLTLYRLEEILEGDLDELITA 341 Query: 350 TLA 352 A Sbjct: 342 LAA 344 >gi|126725348|ref|ZP_01741190.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150] gi|126704552|gb|EBA03643.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150] Length = 421 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 132/344 (38%), Positives = 187/344 (54%), Gaps = 37/344 (10%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQD-----RLCDNLIL 72 R FL K N++E L RE L D ++F +QD + D+ + Sbjct: 84 RFEFLEAKLASGE-TDNIVE---LSREYSELKPVADQIMAFQTLVQDIDAAEAMLDDPEM 139 Query: 73 LELALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 ELA EE L+E D+L IKL + L AD+ A +E+ G GG Sbjct: 140 RELAAEE-----LKELRDSLPDAENAIKLVL-------LPKDTADARPAIIEIRPGTGGD 187 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A LLRMY R+AE +K E +E E GIK IKG N +G LK E GVH Sbjct: 188 EAALFAGDLLRMYQRYAESNGWKFEIIEEQVSELGGIKEIIANIKGTNVFGKLKFESGVH 247 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P ++ ++++I SD RIDT RASGAGGQHVNTTDS Sbjct: 248 RVQRVPTTESGGRIHTSAATVAVLPEAEE-VDLDIPASDLRIDTMRASGAGGQHVNTTDS 306 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG++V E+SQH+N+ A ++R++LYE+E QK + K+++G Sbjct: 307 AVRITHLPTGMIV-VSMEKSQHRNREIAMQVMRSRLYEMERQKVAD--ERAADRKSQVGS 363 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P + D R N+ V+ G+LD+ + A Sbjct: 364 GDRSERIRTYNF-PQGRMTDHRINLTLYKLDQVMSGELDEIIDA 406 >gi|308186585|ref|YP_003930716.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1] gi|308057095|gb|ADO09267.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1] Length = 360 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 98/242 (40%), Positives = 148/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D ++EV AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DERACFIEVRAGTGGDEAAIFAGDLFRMYSRYAEARRWRVEIVSANEGEHGGYKEVIARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG +K E G HR+ R+ +S R HTS ++ V P + ++ EI+ D +IDT Sbjct: 167 TGDGAYGRMKFESGGHRVQRVPETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A +L ++++ E+ +R Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARR 286 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 A + + +G G + R+Y P V D R N+ +V++G LD ++ Sbjct: 287 H--AAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIEP 343 Query: 350 TL 351 + Sbjct: 344 IV 345 >gi|332298739|ref|YP_004440661.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168] gi|332181842|gb|AEE17530.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168] Length = 359 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 123/338 (36%), Positives = 182/338 (53%), Gaps = 15/338 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R + LN +DP L ++ K +MRE HL + E ++ L L EED Sbjct: 10 KRYAELNDMIQDPELVRDPKRYKEIMREHSHLSQVMDSYAEYKEVLQGISEAQHLITEED 69 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLL------SGEADSNDAYLEVHAGAGGTESQDWA 134 D + + + L+ LE + ES L + + +E+ GAGG E+ +A Sbjct: 70 DHDMKEMAREELK--ALESRVPEMESALKMLLIPPDPLEEKNIIMEIRGGAGGDEASLFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE + +K E ++ + E G K + I G YG L+ E GVHR+ R+ Sbjct: 128 ADLFRMYTRYAEIKNWKYEIMDASETEVGGYKEISFSISGKFVYGSLRWEGGVHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P +++ EIEI D R+D RA G GGQ VNTTDSAVR+TH Sbjct: 188 ETEAQGRIHTSAVTVAVLPEAEET-EIEIRPEDLRVDVMRAGGPGGQCVNTTDSAVRLTH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV Q E+SQ KNKA+A +LRA+L++LE K++ A + K+ +G G + Sbjct: 247 LPTGLVVIQQDEKSQIKNKAKAMRVLRARLFDLEESKKQ--AERSAARKSMVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 IR+Y P V D R N+ + G+LD+ + A Sbjct: 305 IRTYNF-PQNRVTDHRINLTLYKLDQFMQGNLDEMLDA 341 >gi|121608524|ref|YP_996331.1| peptide chain release factor 1 [Verminephrobacter eiseniae EF01-2] gi|166223615|sp|A1WI56|RF1_VEREI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|121553164|gb|ABM57313.1| bacterial peptide chain release factor 1 (bRF-1) [Verminephrobacter eiseniae EF01-2] Length = 359 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 123/344 (35%), Positives = 179/344 (52%), Gaps = 27/344 (7%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---------NL 70 QRL L+ P + ++++ + + RE + R D + Sbjct: 13 AQRLGELDFLLARPDIMADMVQYRSIAREHAEVTQVAGRYARYLQREADLGAARELLADP 72 Query: 71 ILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + ELA EE D S L++ D LQR+ L E D+ +A++E+ AG GG Sbjct: 73 GMAELAQEEIDSSQTELRQLEDELQRLLLPKEPD----------DARNAFVEIRAGTGGD 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ES +A L RMYTR+A +R ++ + L + E G K L I G YG LK E G H Sbjct: 123 ESALFAGDLTRMYTRYAARRGWQVQVLSENPAELGGYKEIVLRIDGEQVYGTLKFESGGH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P D + I ++ ++ RIDT+RASGAGGQH+N TDS Sbjct: 183 RVQRVPATETQGRVHTSACTVAVMPEPDPARAIALNPAELRIDTFRASGAGGQHINKTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+ H+PTG+V +CQ RSQH NKA+A +L+A+L E E + E A K IG Sbjct: 243 AVRVVHLPTGIVAECQDGRSQHGNKARALQVLQARLQEKE--RSERAAKEAALRKGLIGS 300 Query: 309 GR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P + D R + +LDG+LD ++A Sbjct: 301 GERSDRIRTYNF-PQGRLTDHRIQLTLYQLQQLLDGELDPMLQA 343 >gi|160940109|ref|ZP_02087454.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC BAA-613] gi|158436689|gb|EDP14456.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC BAA-613] Length = 358 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 121/330 (36%), Positives = 194/330 (58%), Gaps = 15/330 (4%) Query: 32 DPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDCSIL-QE 87 DP + Q+ LM+E+ L A K+ + + D+L LLE +E+ + +E Sbjct: 21 DPDVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVEDSLALLEEESDEEMREMAKEE 80 Query: 88 TSDNLQRIK-LEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 SD +RI+ LE E K LL + D + LE+ AGAGG E+ +A L RMY+ +A Sbjct: 81 LSDARKRIEDLEHELKIL--LLPKDPNDDKNIILEIRAGAGGDEAALFAAELYRMYSNYA 138 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + +++K E + +++ G K ++ G AY LK E GVHR+ R+ +S R HTS Sbjct: 139 DSQRWKVEIVSLNENGIGGFKEVVAMVTGKGAYSKLKYESGVHRVQRVPETESGGRIHTS 198 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 +++ V P ++ ++++I +DCRID RASG GGQ VNTTDSAVR+TH+PTG+V+ Q Sbjct: 199 TATVAVMPEAEE-VDVQIDMNDCRIDVMRASGNGGQCVNTTDSAVRLTHMPTGIVIYSQT 257 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 E+SQ +NK +A+ +LR+KLY++EL+KR+ ++ E +++IG G +IR+Y P Sbjct: 258 EKSQLQNKEKAFRLLRSKLYDIELEKRQ--SSEAEERRSQIGTGDRSEKIRTYNF-PQGR 314 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R + +++GD+ + + +A Sbjct: 315 VTDHRIKLTLYKIDSIMNGDIQELLDNLIA 344 >gi|119505822|ref|ZP_01627888.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2080] gi|119458320|gb|EAW39429.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2080] Length = 362 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 101/241 (41%), Positives = 148/241 (61%), Gaps = 10/241 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DSN+ YLE+ AG GG E+ ++ L RMY+R+AE + ++ E + G+ G K + Sbjct: 109 DSNNVYLEIRAGTGGDEAAIFSGDLFRMYSRYAESKGWRLETISDRAGDHGGFKEIISRV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y +LK E G HR+ R+ +S R HTS ++ V DD I+I + D R+DT Sbjct: 169 VGNDVYAYLKFESGAHRVQRVPETESQGRIHTSACTVAVMAEPDDVEAIDIRKEDLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSAVRITH+PTGVVV+CQ ERSQHKN+A+A ++L A+L L Sbjct: 229 FRSSGAGGQHVNTTDSAVRITHLPTGVVVECQDERSQHKNRARAMSLLSARL----LTAA 284 Query: 293 EEIANIGESSKTE--IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E+ A+ ++++ +G G +IR+Y P V D R N+ +++ G LD + Sbjct: 285 EDKAHSEQAAERRNLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEIVQGQLDALV 343 Query: 348 K 348 + Sbjct: 344 Q 344 >gi|254690018|ref|ZP_05153272.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870] Length = 337 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 115/297 (38%), Positives = 170/297 (57%), Gaps = 19/297 (6%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI--------LQETSDNLQRIK 96 L E L + + I+E+ D + +LA DD S ++E + +RI Sbjct: 48 LASEYSELQDVVGKIRELSDARMEAS---DLAAMRDDASTDAEMRALAVEELPEVEKRIA 104 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + Q L AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + Sbjct: 105 VLEQDVQILLLPKDAADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVS 164 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G+ G K + G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 165 ASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAE 224 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D I+IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A Sbjct: 225 D-IDIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARA 282 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +LRA+LY++E QK E + ++ ++++G G +IR+Y P V D R N+ Sbjct: 283 MQILRARLYDMERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINL 336 >gi|255280026|ref|ZP_05344581.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469] gi|255269117|gb|EET62322.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469] Length = 357 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 200/350 (57%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68 +FD ++ + R L + +P + + + LM+E+ Q + +A KE + + D Sbjct: 1 MFDKLEDLLIRFEELLNELNEPGVASDPAHFQKLMKEQGNLQPIVDAYKEYKECKKTVED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQ-RI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125 +L +L+ +E+ +L+E + + RI +LE E K LL + D + +E+ AGA Sbjct: 61 SLAMLDGESDEEMREMLKEELNTAKDRIAELETELKIL--LLPKDPNDDKNVIMEIRAGA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A + R+Y ++AEKR+++ E L + G+K +I G AY LK E Sbjct: 119 GGDEAALFAAEMYRLYVKYAEKRRWRVELLNADEIGIGGMKEVNFMITGQGAYSRLKYES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS ++ V P ++ +++ I E D RID RASG GGQ VNT Sbjct: 179 GVHRVQRVPETESGGRIHTSTVTVAVMPEAEE-VDVVIDEKDIRIDVMRASGNGGQCVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+TH PTG+VV Q E+SQ +NKA+A+ +LRAKLY++E QK + + +++ Sbjct: 238 TDSAVRLTHYPTGIVVYSQTEKSQLQNKAKAFALLRAKLYDIEQQKAHDAE--AQLRRSQ 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IG G +IR+Y P V D R + ++DGD+D+ + + +A Sbjct: 296 IGTGDRSEKIRTYNF-PQGRVTDHRIKLTLYKLDSIMDGDIDELLDSLIA 344 >gi|57504876|ref|ZP_00370851.1| peptide chain release factor 1 [Campylobacter coli RM2228] gi|305432416|ref|ZP_07401578.1| peptide chain release factor RF1 [Campylobacter coli JV20] gi|57019304|gb|EAL56006.1| peptide chain release factor 1 [Campylobacter coli RM2228] gi|304444455|gb|EFM37106.1| peptide chain release factor RF1 [Campylobacter coli JV20] Length = 355 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 104/244 (42%), Positives = 148/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + L++ Y R+AE R +K E + +G G K +L+ Sbjct: 104 DERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG A+ LK E G HR+ R+ +S R HTS +I V P VDD IEIEI+ +D +ID Sbjct: 164 KGAGAFSRLKYEGGTHRVQRVPQTESQGRIHTSAITIAVMPEVDD-IEIEINPNDLKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITH+PTG+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHLPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMK 348 E +A E+ K+++G G +IR+Y P + D R N+ +L DG D+ ++ Sbjct: 281 ERLAQESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINLTLYRLDAILQDGLFDEVIE 339 Query: 349 ATLA 352 +A Sbjct: 340 PLIA 343 >gi|254482800|ref|ZP_05096037.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2148] gi|214036881|gb|EEB77551.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2148] Length = 361 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 98/239 (41%), Positives = 147/239 (61%), Gaps = 16/239 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS++ +LE+ AG GG E+ ++ L RMY+R+AE +K E L GE G K + Sbjct: 109 DSHNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAENMGWKVEVLSERHGEHGGYKEIITRV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + Y LK E G HR+ R+ +S R HTS ++ + P + ++EI+++D R+DT Sbjct: 169 EGRDVYAHLKFESGAHRVQRVPETESQGRIHTSACTVAIMPEAEAVDQVEINKADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------- 285 YRASGAGGQHVN TDSAVR+TH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL Sbjct: 229 YRASGAGGQHVNKTDSAVRLTHLPSGIVVECQDERSQHKNRARAMSLLQAKLLTSAQDKA 288 Query: 286 -ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 E + ++R + G+ S +IR+Y P + D R N+ ++V++GDL Sbjct: 289 AEEQAEQRRNLVGTGDRSD-------RIRTYNF-PQGRLTDHRINLTLYKLAEVVEGDL 339 >gi|148377997|ref|YP_001256873.1| peptide chain release factor 1 [Mycoplasma agalactiae PG2] gi|238686692|sp|A5IZH6|RF1_MYCAP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148292043|emb|CAL59435.1| Peptide chain release factor 1 [Mycoplasma agalactiae PG2] Length = 358 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 123/344 (35%), Positives = 184/344 (53%), Gaps = 39/344 (11%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC--DNL--------ILLELALE 78 K +DP + N+ +E ++ I+ I+EI ++ +N+ I+LE E Sbjct: 22 KIDDPEVISNI-------KEYSAINKEIAKIREISEKFITYENILKDVEQAKIMLESKNE 74 Query: 79 ED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E+ I+ E S L ++ E + L E D + +E+ AGG E+ +A Sbjct: 75 EEVEFAKMIIDENSLKLDELE---EKLKILILPQDENDDKNIIVEIRGAAGGDEANIFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+++A++ F+ + L + G IKG AY K E GVHR+ R+ Sbjct: 132 DLFRMYSKFADELGFRLKILSTNSASAGGFSQIVFSIKGEKAYSKFKFESGVHRVQRVPV 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ V P +DDS+EIEI SD +ID +R+SGAGGQ VNTTDSAVRITH+ Sbjct: 192 TESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKIDVFRSSGAGGQSVNTTDSAVRITHL 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-------IANIGESSKTEIGW 308 PT +VV Q ERSQ N+ A +L++KLY+LE+QK+ E +A G+ S+ Sbjct: 252 PTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKAEEESGYRKLAGHGDRSE----- 306 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R + TS +++G L + A LA Sbjct: 307 --KIRTYNY-PQDRVTDHRISF-STSLKPIMEGKLTPIIDALLA 346 >gi|241763794|ref|ZP_04761840.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN] gi|241366926|gb|EER61331.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN] Length = 362 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 121/336 (36%), Positives = 182/336 (54%), Gaps = 11/336 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 QRL L+ + ++ + + + RE + Q R D E+ + Sbjct: 13 AQRLGELDFLLSREDIMADMAQYRTISREHAEVTQIAGRYARYQQREADLAGAREMLADP 72 Query: 80 DDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANM 136 D + QE TS + ++LE E ++ LL + D + +A++E+ AG GG ES +A Sbjct: 73 DMAEMAQEEITSAEAELLQLEDELQRL--LLPKDPDDARNAFVEIRAGTGGDESALFAGD 130 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY R+A++ +K E + + E G K L I+G + YG LK E G HR+ R+ Sbjct: 131 LTRMYMRYADRVGWKVEVVSENAAELGGYKEIVLRIEGDHVYGALKFESGGHRVQRVPAT 190 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P D+ I+++ +D RIDT+RASGAGGQH+N TDSAVR+ H+P Sbjct: 191 ETQGRIHTSACTVAVMPEPDEHEAIKLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLP 250 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+V +CQ RSQH NKA+A +L+A++ E E + E A K IG G +IR Sbjct: 251 TGIVAECQDGRSQHSNKAKALQVLQARIQEKE--RSERAAKEAALRKGLIGSGDRSDRIR 308 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +Y P + D R N+ V+DGDL D ++A Sbjct: 309 TYNF-PQGRLTDHRINLTLYKLQYVMDGDLADVLQA 343 >gi|298529663|ref|ZP_07017066.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans ASO3-1] gi|298511099|gb|EFI35002.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans ASO3-1] Length = 356 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 120/336 (35%), Positives = 180/336 (53%), Gaps = 26/336 (7%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED----- 80 + T DP ++ N + + L + L +S +E + + + ELA + D Sbjct: 15 IETDLSDPEVFSNQEKYRKLSKSHSELGPIVSTYREYRRIVSEMEENRELARDRDPEIRE 74 Query: 81 ----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + LQE D L+ E + + + S D + LE+ AG GG E+ +A Sbjct: 75 LAQAELETLQEEKDRLE------EDLKIQLVPSDPLDDKNIILEIRAGTGGEEAALFAAD 128 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY R+AE+R +K E L + + GIK I G Y LK E GVHR+ R+ Sbjct: 129 LFRMYFRYAEERSWKVEVLNMQETGTGGIKEVIASISGKKVYSRLKYESGVHRVQRVPET 188 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS ++ + P ++ +++ I +D R+D +RASG GGQ VNTTDSAVRITHIP Sbjct: 189 ESQGRVHTSAVTVAILPEAEE-VDVNIEPNDLRVDVFRASGPGGQSVNTTDSAVRITHIP 247 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--ELQKREEIANIGESSKTEIGWG---RQ 311 TG+VV CQ E+SQHKN+A+A +LR++L ++ E QKRE ++ + ++G G + Sbjct: 248 TGLVVSCQDEKSQHKNRAKALKVLRSRLLQIMEEEQKRE----YDDNRRAQVGSGDRSER 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 IR+Y P V D R N+ + V+ G LD + Sbjct: 304 IRTYNF-PQSRVTDHRINLTLYNLESVMQGHLDGII 338 >gi|167464538|ref|ZP_02329627.1| peptide chain release factor 1 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 357 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 104/240 (43%), Positives = 152/240 (63%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +EV AGG E+ +A L RMY+R+AE + +KTE L+ + + G K T +I Sbjct: 107 DNKNVIVEVRGAAGGDEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ RI +S R HTS S++ V P ++D I+IEI +SD R+DT Sbjct: 167 KGNGAYSKLKYESGAHRVQRIPVTESGGRIHTSTSTVAVMPEMED-IDIEIKDSDIRVDT 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+TH+PTG+V CQ +SQ+ NKA+A +LRA++Y+ ++++ Sbjct: 226 FCSSGAGGQSVNTTKSAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYD-QVRQE 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE GE K+++G G +IR+Y P V D R + +L GDL++ + A Sbjct: 285 EEAKYAGE-RKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSILGGDLEEIITA 342 >gi|297182948|gb|ADI19096.1| protein chain release factor a [uncultured alpha proteobacterium HF0070_34A12] Length = 353 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 107/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A LEV AG GG E+ +A+ L MY R+A K ++ E +E+ + G K AT I Sbjct: 102 DSRNAILEVRAGTGGDEAALFASDLFGMYQRFAGKHGWRFEVMEVSETGIGGYKEATANI 161 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + + LK E GVHR+ R+ ++ R HTS +++ V P +D ++I++ ESD RID Sbjct: 162 AGSDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-VDIDVQESDLRIDV 220 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVRITHIPTG+VV Q E+SQHKN+A+A +LRA+LY+ E + Sbjct: 221 FRASGPGGQSVNTTDSAVRITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARL 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 + A S K ++G G +IR+Y P V D R N+ V+ G+ LD+ ++ Sbjct: 281 Q--AERAASRKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVE 337 Query: 349 ATLA 352 A +A Sbjct: 338 ALVA 341 >gi|193214860|ref|YP_001996059.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC 35110] gi|238692722|sp|B3QYI4|RF1_CHLT3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|193088337|gb|ACF13612.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC 35110] Length = 358 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 101/241 (41%), Positives = 156/241 (64%), Gaps = 4/241 (1%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSAT 169 EADS +A +E+ AGAGG E+ +A LLRMY R+AE+ +K E L+ ++ G K AT Sbjct: 104 EADSRNAMVEIRAGAGGDEAALFAADLLRMYQRFAERNGWKCEVLDYNESSGLGGFKEAT 163 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G + YG +K E GVHR+ R+ ++ R HTS +S+ V P +D +IEI + D + Sbjct: 164 ISLSGDDVYGTMKFESGVHRVQRVPETETQGRVHTSAASVAVLPEAED-FDIEIRKEDLQ 222 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +DTYR+ G GGQ+VN ++AVRITH+P+G+VV CQ+ERSQ +N+ +A MLR+KLY+++L Sbjct: 223 MDTYRSGGKGGQNVNKVETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKL 282 Query: 290 -QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 ++++E A++ S + +IR+Y P V D R + +LDGDL + ++ Sbjct: 283 AEQQKERADLRRSMVSTGDRSAKIRTYNF-PQSRVTDHRIGFTTHALPQLLDGDLFEIIE 341 Query: 349 A 349 A Sbjct: 342 A 342 >gi|83942386|ref|ZP_00954847.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36] gi|83846479|gb|EAP84355.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36] Length = 351 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 109/256 (42%), Positives = 150/256 (58%), Gaps = 14/256 (5%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L EAD A LE+ G GG E+ +A LLRMY R+AE R +K E +E E Sbjct: 92 QLALLPRDEADKKPAMLEIRPGTGGDEAALFAADLLRMYQRYAEARGWKVELIEQQFTEL 151 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G+K IKG N + LK E GVHR+ R+ +S R HTS +++ V P +D ++I Sbjct: 152 GGVKEVVAHIKGENVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAED-VDIH 210 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+A Sbjct: 211 IDANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKA 269 Query: 283 KLYELELQKRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +LY++E Q+ + A +G ++E +IR+Y P + D R N+ Sbjct: 270 RLYDMERQRVDSERSASRAAQVGSGDRSE-----RIRTYNF-PQGRLTDHRINLTLYRLE 323 Query: 337 DVLDGDLDDFMKATLA 352 V+ GDLD+ + A A Sbjct: 324 AVMQGDLDEIVDALTA 339 >gi|254238595|ref|ZP_04931918.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719] gi|126170526|gb|EAZ56037.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719] Length = 360 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +LE+ AG G E+ ++ L RMY+R+AE++ ++ E L ++GE G K + Sbjct: 109 DSRNVFLEIRAGTCGDEAAIFSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S R HTS ++ V P D+ IEI+ +D R+DT Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVN TDSAVRITHIP+G+VV+CQ+ERSQHKN+A+A L AKL + + Sbjct: 229 YRSSGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAA 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + K +G G +IR+Y P V D R N+ S +V++G ++ ++ Sbjct: 289 QQAIA--STRKLLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEP 345 Query: 350 TL 351 L Sbjct: 346 LL 347 >gi|323143931|ref|ZP_08078589.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066] gi|322416295|gb|EFY06971.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066] Length = 364 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 98/242 (40%), Positives = 148/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY ++ E + ++ E + +GE G K + Sbjct: 109 DDCNCFLEIRAGTGGDEAALFAGELYRMYAKYCEAKGWQLEVVSQSEGEVGGYKEIIAKL 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG++K E G HR+ R+ ++ R HTS ++ V P + S E++ +D RIDT Sbjct: 169 SGEGAYGYMKFESGGHRVQRVPATEAQGRVHTSACTVMVLPEIPPSKAPEVNPADLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSA+RITHIPTG+VV+CQ ERSQH+N+ +A +L ++L ++E KR Sbjct: 229 FRASGAGGQHINKTDSAIRITHIPTGIVVECQDERSQHRNRERAMEVLLSRLAKMEEDKR 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +A E+ + + G +IR+Y P V D R N+ S+VL+G+LD +K Sbjct: 289 --LAEQTEARHSILSSGDRSDRIRTYNF-PQSRVTDHRINLTLYRLSEVLEGNLDLILKP 345 Query: 350 TL 351 + Sbjct: 346 VI 347 >gi|225175858|ref|ZP_03729851.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1] gi|225168782|gb|EEG77583.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1] Length = 356 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 149/242 (61%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +EV AG GG E+ +A L RMYTR+AE++ +KTE L+ ++ + G K I Sbjct: 106 DDKNVIVEVRAGTGGDEAALFAGDLFRMYTRYAERQGWKTEVLDANETDIGGFKEVVFAI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS +++ V P +D +E++I+++D RID Sbjct: 166 EGDGAYSRLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VEVDINQNDLRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVRITH+P+G+VV CQ E+SQHKNK +A +LRA+L+E ++ Sbjct: 225 FCSSGPGGQSVNTTQSAVRITHLPSGIVVSCQDEKSQHKNKDKAMRVLRARLFEKAQEEA 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + KT++G G +IR+Y P V D R + LDGDLD+ + A Sbjct: 285 AAEQA--AARKTQVGSGDRSERIRTYNF-PQGRVSDHRIGMTLYKLDQFLDGDLDEMVDA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|189424095|ref|YP_001951272.1| peptide chain release factor 1 [Geobacter lovleyi SZ] gi|238692126|sp|B3E628|RF1_GEOLS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189420354|gb|ACD94752.1| peptide chain release factor 1 [Geobacter lovleyi SZ] Length = 355 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 124/343 (36%), Positives = 184/343 (53%), Gaps = 24/343 (6%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILL----- 73 R L + DP + N E + L RE L I K++ D L +N LL Sbjct: 11 RFQELESLLSDPTVIANQPEFRKLSREHADLAPLIEAFRRYKKVLDELEENQELLADPEM 70 Query: 74 -ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+A EE + S +R+ E+ + L DS D LE+ AG GG ES Sbjct: 71 KEMAEEE-----ISRLSQEKERLDAEI---KILLLPKDPNDSRDVILEIRAGTGGDESAL 122 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AEK ++K E L + E G K I+G + Y LK E G HR+ R Sbjct: 123 FSGDLFRMYSRFAEKNRWKVEMLSCSESERGGYKEVIASIEGQDVYAKLKYESGTHRVQR 182 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ + +D ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRI Sbjct: 183 VPETEAQGRIHTSACTVAIMAEAED-VDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRI 241 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG VV CQ+ERSQ KN+A+A +L+ ++ L+ ++E+ A + K ++G G Sbjct: 242 THIPTGTVVACQEERSQIKNRAKAMKVLKTRI--LDTIQQEQNAKLAADRKQQVGSGDRS 299 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R + ++ GD+++ A A Sbjct: 300 ERIRTYNF-PQGRMTDHRIGLTLYRLDSIMAGDIEEITDALRA 341 >gi|78484734|ref|YP_390659.1| peptide chain release factor 1 [Thiomicrospira crunogena XCL-2] gi|119361633|sp|Q31IN8|RF1_THICR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78363020|gb|ABB40985.1| bacterial peptide chain release factor 1 (bRF-1) [Thiomicrospira crunogena XCL-2] Length = 363 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 117/338 (34%), Positives = 190/338 (56%), Gaps = 17/338 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIKEIQDRLCDNLILLE 74 +N V+RL +N DP + N + + L +E L + +F + IQ++ +L + Sbjct: 9 LENLVERLDEVNHLISDPEIINNQNKFRNLTKEHSQLTPVVETFNQFIQNQ--GDLQEAK 66 Query: 75 LALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGT 128 ++ D + + + L Q+ LE E ++ LL + D + +LE+ AG GG Sbjct: 67 DMIKSGDPDLKEMGQEELPELEKQQATLEAELQKM--LLPKDPNDDANIFLEIRAGTGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+R+AE +++ E + +GE G K I G AY LK E G H Sbjct: 125 EAAIFAGDLFRMYSRYAETMRWQVEVINSQEGEHGGYKEIIARIIGDGAYSRLKFESGAH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +++ + P D +I+++ +D ++DT+RASGAGGQHVN TDS Sbjct: 185 RVQRVPATETQGRVHTSAATVVIMPEAQDVEQIDLNPADLKVDTFRASGAGGQHVNKTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITHIPTG VV+CQ ERSQHKN+A+A ++L +++ ++ ++R I + K+ +G Sbjct: 245 AIRITHIPTGTVVECQDERSQHKNRARAMSLLASRI--MDERQRIHDQEIAQERKSLVGS 302 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 G +IR+Y P V D R N+ +++ G L Sbjct: 303 GDRSERIRTYNY-PQGRVTDHRINLTLYKLDEIMQGGL 339 >gi|323136601|ref|ZP_08071682.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242] gi|322397918|gb|EFY00439.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242] Length = 356 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 120/314 (38%), Positives = 178/314 (56%), Gaps = 14/314 (4%) Query: 45 LMRERQHLDNAISFIKEIQD--RLCDNL--ILLELALEEDDCSILQETSDNLQRIKLEVE 100 L RER LD+ + I+ +D R D+L +L + +L+ + L E+ + R KLE Sbjct: 33 LSRERATLDDVVDAIRAWRDAQREVDDLAAMLADSSLDPE-MRALAESETDGAREKLEAA 91 Query: 101 YK--QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + L EAD LEV AG GG E+ +A L R Y ++A + ++ E + Sbjct: 92 ANTLRLALLPKDEADEKGVILEVRAGTGGDEAALFAGDLFRAYQKYAALKGWRVELVSES 151 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 G G K I G YG LK E GVHR+ R+ ++ R HTS +++ V P +D Sbjct: 152 PGALGGFKEIVAEIIGRGVYGRLKFESGVHRVQRVPETETQGRIHTSAATVAVLPQAED- 210 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 ++I+I E D +IDT RA GAGGQHVN T+SA+RITHIP+G+VV Q+ERSQH+NKA+A N Sbjct: 211 VDIDIDEKDLQIDTMRAQGAGGQHVNKTESAIRITHIPSGIVVMMQEERSQHRNKAKAMN 270 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSP 335 +LR++LY+ E Q+ ++ + K ++G G +IR+Y P V D R N+ Sbjct: 271 VLRSRLYDAERQRLDK--ERSDDRKQQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKL 327 Query: 336 SDVLDGDLDDFMKA 349 V++G+ D+ + A Sbjct: 328 DRVMEGEFDEIIDA 341 >gi|254180490|ref|ZP_04887088.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655] gi|184211029|gb|EDU08072.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655] Length = 360 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 121/346 (34%), Positives = 185/346 (53%), Gaps = 19/346 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D RL+ LN ++ ++ + + L RE + + + + D L EL Sbjct: 10 DQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQELL 69 Query: 77 LEEDDCSI-------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 D S+ L+ D + R+ E+ Q L D + ++E+ AG GG E Sbjct: 70 A---DASMRDFAEDELRGARDRMGRLAAEL---QTMLLPKDPNDERNIFVEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR Sbjct: 124 SALFAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+THI TG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 244 VRVTHISTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQYHEQHAKEAATRKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ ++DGDLD+ + A ++ Sbjct: 302 DRSERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVS 346 >gi|322383119|ref|ZP_08056946.1| peptide chain release factor 1-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152781|gb|EFX45407.1| peptide chain release factor 1-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 356 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 104/240 (43%), Positives = 152/240 (63%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +EV AGG E+ +A L RMY+R+AE + +KTE L+ + + G K T +I Sbjct: 106 DNKNVIVEVRGAAGGDEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ RI +S R HTS S++ V P ++D I+IEI +SD R+DT Sbjct: 166 KGNGAYSKLKYESGAHRVQRIPVTESGGRIHTSTSTVAVMPEMED-IDIEIKDSDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+TH+PTG+V CQ +SQ+ NKA+A +LRA++Y+ ++++ Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYD-QVRQE 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE GE K+++G G +IR+Y P V D R + +L GDL++ + A Sbjct: 284 EEAKYAGE-RKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSILGGDLEEIITA 341 >gi|59711375|ref|YP_204151.1| peptide chain release factor 1 [Vibrio fischeri ES114] gi|197334513|ref|YP_002155529.1| peptide chain release factor 1 [Vibrio fischeri MJ11] gi|75431754|sp|Q5E6T3|RF1_VIBF1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690273|sp|B5FBX0|RF1_VIBFM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|59479476|gb|AAW85263.1| peptide chain release factor RF-1 [Vibrio fischeri ES114] gi|197316003|gb|ACH65450.1| peptide chain release factor 1 [Vibrio fischeri MJ11] Length = 362 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 117/319 (36%), Positives = 182/319 (57%), Gaps = 11/319 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L RE L+ + + D + E+A +EDD + + + Sbjct: 25 DPDVIGDQNKFRALSREYSQLEEVTQCFQAYEQAQEDLVAAQEMA-QEDDEEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+R+AEK Sbjct: 84 IKDAKEAIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAGIFAGNLFRMYSRFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 KGWRVEVMSSNEAEHGGYKEMIAKVSGEGAYGVLKFESGGHRVQRVPETESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A ++L A++ ++ ++ A + ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMSVLAARI--IQAEEARRAAAVSDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDL 343 D R N+ ++V++GDL Sbjct: 321 DHRINLTVYRLNEVMEGDL 339 >gi|17547620|ref|NP_521022.1| peptide chain release factor 1 [Ralstonia solanacearum GMI1000] gi|20139328|sp|Q8XVD0|RF1_RALSO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|17429924|emb|CAD16608.1| probable peptide chain release factor 1 (rf-1) protein [Ralstonia solanacearum GMI1000] Length = 360 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 149/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMYTR+AE+++++ E + + G K + + Sbjct: 107 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D +I+I+ +D RIDT Sbjct: 167 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A +L A+L + Q+R Sbjct: 227 FRASGAGGQHINKTDSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ IG G +IR+Y P + D R N+ ++DGDL + + A Sbjct: 285 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRITDHRINLTLYKIDALMDGDLGELLGA 343 Query: 350 TLA 352 A Sbjct: 344 LAA 346 >gi|268610024|ref|ZP_06143751.1| peptide chain release factor 1 [Ruminococcus flavefaciens FD-1] Length = 357 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 147/238 (61%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +AN L RMYT +AE R +K E L + E G K + I Sbjct: 107 DDKNVIIEIRGGAGGEEASLFANSLYRMYTMYAEARGWKQEVLSANPTELGGFKEISFSI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS ++ V DD +E+EI+ +D +ID Sbjct: 167 EGEGAYSRLKYESGVHRVQRVPETESQGRIHTSTVTVAVLVEADD-VELEINPTDLKIDY 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N T+SAVRIT++PT VVV+CQ ERSQHKNK +A +LR+++Y E ++ Sbjct: 226 FRASGAGGQHINKTESAVRITYLPTNVVVECQDERSQHKNKDKAMKILRSRIY--EAMQQ 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E+ I ++++G G +IR+Y P + D R + D+L+G+LD+ Sbjct: 284 EQNDKIASERRSQVGTGDRSERIRTYNY-PQGRLTDHRIGLTIYRLEDILNGNLDEVF 340 >gi|299065550|emb|CBJ36721.1| peptide chain release factor RF-1 [Ralstonia solanacearum CMR15] Length = 356 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 149/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMYTR+AE+++++ E + + G K + + Sbjct: 103 DHRNIFLEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRL 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D +I+I+ +D RIDT Sbjct: 163 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQH+NK +A +L A+L + Q+R Sbjct: 223 FRASGAGGQHINKTDSAVRLTHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ IG G +IR+Y P + D R N+ ++DGDL + + A Sbjct: 281 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRITDHRINLTLYKIDALMDGDLGELLGA 339 Query: 350 TLA 352 A Sbjct: 340 LAA 342 >gi|291543206|emb|CBL16315.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp. 18P13] Length = 361 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 118/338 (34%), Positives = 187/338 (55%), Gaps = 14/338 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLILLELAL 77 Q+ ++ + DP + ++ LM+E ++L+ + K + + LL+ Sbjct: 10 QKFEEISQRLSDPAVTTDIAVYTQLMKEYKNLEPIVQKYRAYKRSAQSMQEARELLDAGS 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWA 134 E+ + + + ++ +L EY + +L D ND +E+ GAGG E+ +A Sbjct: 70 EDPELREMAQAEFETEKEQL-AEYAEQLKILLLPKDPNDDRNVIIEIRGGAGGEEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 N L RMYT +AE R +K E L + E G K + I G AY LK E GVHR+ R+ Sbjct: 129 NSLYRMYTMYAESRGWKQEVLSANPTELGGFKEISFSITGEGAYSRLKYESGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V V D +E+ I+ +D +ID +R+SGAGGQH+N T+SAVRITH Sbjct: 189 ETESQGRIHTSTVTVAVL-VEADEVELAINPTDLKIDVFRSSGAGGQHINKTESAVRITH 247 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQ KNK +A +LR++LYE Q++++ I + ++G G + Sbjct: 248 LPTGLVVECQDERSQFKNKDRAMMILRSRLYERMQQEQQD--KIASQRRMQVGTGDRSER 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 IR+Y P + D R + DV++G+LD+ + A Sbjct: 306 IRTYNF-PQGRLTDHRIGLTIYRLEDVMNGNLDEVLDA 342 >gi|296138963|ref|YP_003646206.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM 20162] gi|296027097|gb|ADG77867.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM 20162] Length = 362 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 130/355 (36%), Positives = 189/355 (53%), Gaps = 25/355 (7%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ + S L + DP L + A+ + + L ++ ++++ D ELA Sbjct: 10 DDILAEYSGLEQQMSDPALHNDASAARKVGKRFAELAPIMATHRKLEAAREDRAAAQELA 69 Query: 77 LEE----DDCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTES 130 ++ D+ ++L E D L+ +Q LL+ DS+D LEV +G GG ES Sbjct: 70 ADDSSFADEVTVLTEQIDALE--------QQLTDLLAPRDPHDSDDVVLEVKSGEGGEES 121 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK--GPNAYGWLKG----- 183 +A L RMY R+AE+R +K E L + G K AT IK GP A G + G Sbjct: 122 ALFAGDLARMYLRYAEQRGWKVETLGATYSDLGGYKDATFAIKSRGPGADGAIDGVWARM 181 Query: 184 --EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHR+ R+ +S R HTS + + VYP D+ E++I ESD RID YR+SG GGQ Sbjct: 182 KFEGGVHRVQRVPATESQGRIHTSAAGVLVYPEPDEVEEVQIDESDLRIDVYRSSGKGGQ 241 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PT +VV CQ ERSQ +NKA+A +L A+L L ++ E A+ + Sbjct: 242 GVNTTDSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLQALREEEAEAAASDSRA 301 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++ + +IR+Y P + D R + + VLDG+LD + A A + Sbjct: 302 AQIRTVDRSERIRTYNF-PENRIADHRIGFKAHNLDQVLDGELDPLLDALQAADR 355 >gi|297181089|gb|ADI17288.1| protein chain release factor a [uncultured alpha proteobacterium HF0070_17D04] Length = 359 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A LEV AG GG E+ +A+ L MY R+A K ++ E +E+ + G K AT I Sbjct: 108 DSRNAILEVRAGTGGDEAALFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + + LK E GVHR+ R+ ++ R HTS +++ V P +D ++I++ ESD RID Sbjct: 168 AGSDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-VDIDVQESDLRIDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVRITHIPTG++V Q E+SQHKN+A+A +LRA+LY+ E + Sbjct: 227 FRASGPGGQSVNTTDSAVRITHIPTGIMVSQQDEKSQHKNRAKAMKILRARLYDAERARL 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 + A S K ++G G +IR+Y P V D R N+ V+ G+ LD+ ++ Sbjct: 287 Q--AERAASRKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVE 343 Query: 349 ATLA 352 A +A Sbjct: 344 ALVA 347 >gi|163739713|ref|ZP_02147121.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107] gi|161386943|gb|EDQ11304.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107] Length = 351 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 113/294 (38%), Positives = 163/294 (55%), Gaps = 15/294 (5%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124 LCD ++ + D + +E L+ E E+ Q L EAD+ A LE+ G Sbjct: 54 LCDLEEAEQMLADPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIRPG 113 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG E+ +A LLRMY R+AE R + E +E E G+K +KG N + LK E Sbjct: 114 TGGDEAALFAGDLLRMYQRYAEARGWGFEIIEEQTTELGGLKEVVAHVKGENVFARLKYE 173 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS +++ V P +D +++ I D RIDT RASGAGGQHVN Sbjct: 174 SGVHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDLRIDPGDLRIDTMRASGAGGQHVN 232 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK------REEIANI 298 TTDSAVRITHIPTG++V E+SQH+N+ A ++R +LY+LE Q+ + + + Sbjct: 233 TTDSAVRITHIPTGIIV-VSSEKSQHRNREIAMQVMRTRLYDLERQRIDSERSADRASQV 291 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G ++E +IR+Y P + D R N+ ++ GDLD+ + A A Sbjct: 292 GSGDRSE-----RIRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTA 339 >gi|295677813|ref|YP_003606337.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002] gi|295437656|gb|ADG16826.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002] Length = 360 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 99/243 (40%), Positives = 148/243 (60%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE+ +++ E + + + G + + I Sbjct: 107 DERNIFLEIRAGTGGDESALFAGDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V P D+ E+EI+ +D RIDT Sbjct: 167 AGDAAYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q Sbjct: 227 FRASGAGGQHINKTDSAVRVTHLPTGIVVECQDDRSQHKNKDRALKVLAARIK--DKQTH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + K IG G +IR+Y P + D R N+ ++DGDL++ + A Sbjct: 285 EQQTKEAATRKNLIGSGDRSERIRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLEELIAA 343 Query: 350 TLA 352 ++ Sbjct: 344 LVS 346 >gi|160878572|ref|YP_001557540.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg] gi|189039966|sp|A9KHD4|RF1_CLOPH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160427238|gb|ABX40801.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg] Length = 358 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 95/243 (39%), Positives = 150/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +E+ GAGG E+ +A L RMY+++AE ++K + + +++ G K +I Sbjct: 106 DSKNVIVEIRGGAGGDEAALFAAELFRMYSKYAETMRWKIDMMNLNENGIGGFKEVIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ RI +S R HTS ++ + P ++ +++E++ +DCR D Sbjct: 166 NGQGAYSKLKYESGVHRVQRIPVTESGGRIHTSTVTVAIMPEAEE-VDVELNMNDCRFDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVR+TH+PTG+V+ CQ E+SQ KN+ +A +LRA+LYELEL+K Sbjct: 225 FRSSGNGGQCVNTTDSAVRLTHMPTGIVISCQDEKSQLKNRDKALKVLRARLYELELEKA 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + K+++G G +IR+Y P D R + D+++GDL + + + Sbjct: 285 HDAE--AAARKSQVGTGDRSEKIRTYNF-PQGRCTDHRIKLTSHRLDDIMNGDLQEVIDS 341 Query: 350 TLA 352 A Sbjct: 342 LTA 344 >gi|319795450|ref|YP_004157090.1| peptide chain release factor 1 [Variovorax paradoxus EPS] gi|315597913|gb|ADU38979.1| peptide chain release factor 1 [Variovorax paradoxus EPS] Length = 362 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 100/246 (40%), Positives = 148/246 (60%), Gaps = 6/246 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A++E+ AG GG ES +A LLRMYTR+ E+ + E + E G K + I Sbjct: 107 DARNAFMEIRAGTGGDESALFAGDLLRMYTRYCERAGLRCEIVSESASELGGYKEVVIRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G L+ E G HR+ R+ ++ R HTS ++ V D+++ ++I+ +D RIDT Sbjct: 167 VGDEVFGKLRFESGGHRVQRVPATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITHIPTG+V +CQ +RSQH+NKA+A +L A++ E + + Sbjct: 227 YRASGAGGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKD--RS 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A K IG G +IR+Y P + D R N+ +++GDL D ++A Sbjct: 285 ERAAKDAAMRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGDVLEA 343 Query: 350 TLAIKK 355 A ++ Sbjct: 344 LRAARE 349 >gi|145588324|ref|YP_001154921.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189039983|sp|A4SV43|RF1_POLSQ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145046730|gb|ABP33357.1| bacterial peptide chain release factor 1 (bRF-1) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 359 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 99/240 (41%), Positives = 149/240 (62%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMYTR+AE++ +K E + + + G K L + Sbjct: 107 DERNVFLEIRAGTGGDESALFAGDLLRMYTRFAERQGWKVEVVNAAESDLGGYKEVVLRL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ ++ R HTS ++ V P D+ ++I+ ++ RIDT Sbjct: 167 VGQSVYSRLKFESGGHRVQRVPQTETQGRIHTSACTVAVMPEADELEAVKINPAELRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITHIPTG VV+CQ +RSQH+N+ QA +L +++ ++ ++R Sbjct: 227 FRASGAGGQHINKTDSAVRITHIPTGTVVECQDDRSQHRNREQAMKVLVSRI--MDARER 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ ++ K+ IG G +IR+Y P + D R N+ ++DGD+DD A Sbjct: 285 EKHQLEAQTRKSLIGSGDRSDRIRTYNF-PQGRITDHRINLTLYKIDAMMDGDIDDLCNA 343 >gi|282889838|ref|ZP_06298377.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500412|gb|EFB42692.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 354 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 110/278 (39%), Positives = 166/278 (59%), Gaps = 18/278 (6%) Query: 84 ILQETSDNLQRI--KLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLL 138 +L+E + NL+ + KL+V+ E+LL D ND +E+ AG GG E+ + + Sbjct: 76 VLEEDTRNLRSLVEKLQVD---LENLLV-PPDPNDHRNTIVELRAGTGGDEAALFVGDCV 131 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY +A+ + ++ E L E G K +++ G N Y +L E G HR+ R+ ++ Sbjct: 132 RMYKLYADSKGWRYELLSCTPSEMGGFKEYVMVLSGQNVYRFLHYEGGTHRVQRVPETEA 191 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ + D+ E+ I E D R+DTYR+SGAGGQHVNTTDSAVR+TH PTG Sbjct: 192 QGRVHTSAMTVAILLEPDEDTEVVIDEKDLRVDTYRSSGAGGQHVNTTDSAVRLTHNPTG 251 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VV CQ+ERSQHKNK +A +L+AK+ E E +K++E I + ++G G +IR+Y Sbjct: 252 IVVYCQEERSQHKNKEKAMRLLKAKIVEAEQRKKQE--EIASNRSQQVGSGDRSERIRTY 309 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 P + D R N+ + + V++GDLD+ TLA+ Sbjct: 310 NF-PQNRITDHRINLTRYNLDRVMEGDLDEI---TLAL 343 >gi|15925108|ref|NP_372642.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Mu50] gi|15927692|ref|NP_375225.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus N315] gi|21283771|ref|NP_646859.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MW2] gi|49486911|ref|YP_044132.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MSSA476] gi|57652140|ref|YP_186925.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus COL] gi|87160795|ref|YP_494718.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196022|ref|YP_500835.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268569|ref|YP_001247512.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus JH9] gi|150394633|ref|YP_001317308.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus JH1] gi|151222234|ref|YP_001333056.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus str. Newman] gi|156980433|ref|YP_001442692.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Mu3] gi|161510323|ref|YP_001575982.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141637|ref|ZP_03566130.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315787|ref|ZP_04839000.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731044|ref|ZP_04865209.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733048|ref|ZP_04867213.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus TCH130] gi|255006906|ref|ZP_05145507.2| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793876|ref|ZP_05642855.1| peptide chain release factor 1 [Staphylococcus aureus A9781] gi|258407044|ref|ZP_05680194.1| peptide chain release factor 1 [Staphylococcus aureus A9763] gi|258422066|ref|ZP_05684983.1| peptide chain release factor 1 [Staphylococcus aureus A9719] gi|258433565|ref|ZP_05688638.1| peptide chain release factor 1 [Staphylococcus aureus A9299] gi|258440460|ref|ZP_05690630.1| peptide chain release factor 1 [Staphylococcus aureus A8115] gi|258445668|ref|ZP_05693846.1| peptide chain release factor 1 [Staphylococcus aureus A6300] gi|258450122|ref|ZP_05698217.1| peptide chain release factor RF1 [Staphylococcus aureus A6224] gi|258453423|ref|ZP_05701405.1| peptide chain release factor 1 [Staphylococcus aureus A5937] gi|262049285|ref|ZP_06022160.1| peptide chain release factor 1 [Staphylococcus aureus D30] gi|262052620|ref|ZP_06024814.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3] gi|269203754|ref|YP_003283023.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus ED98] gi|282894762|ref|ZP_06302988.1| peptide chain release factor 1 [Staphylococcus aureus A8117] gi|282923106|ref|ZP_06330791.1| peptide chain release factor 1 [Staphylococcus aureus A9765] gi|282929042|ref|ZP_06336627.1| peptide chain release factor 1 [Staphylococcus aureus A10102] gi|284025152|ref|ZP_06379550.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 132] gi|294850088|ref|ZP_06790825.1| peptide chain release factor 1 [Staphylococcus aureus A9754] gi|295407048|ref|ZP_06816850.1| peptide chain release factor 1 [Staphylococcus aureus A8819] gi|296275403|ref|ZP_06857910.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MR1] gi|297210061|ref|ZP_06926454.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246047|ref|ZP_06929904.1| peptide chain release factor 1 [Staphylococcus aureus A8796] gi|300910424|ref|ZP_07127876.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus TCH70] gi|304379299|ref|ZP_07362038.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039049|sp|P66019|RF1_STAAN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54039050|sp|P66020|RF1_STAAW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54041594|sp|P66018|RF1_STAAM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56749376|sp|Q6G7J2|RF1_STAAS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71153097|sp|Q5HE82|RF1_STAAC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361613|sp|Q2FF10|RF1_STAA3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361614|sp|Q2FWE0|RF1_STAA8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223609|sp|A7X4W4|RF1_STAA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|172048990|sp|A6QIW2|RF1_STAAE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039994|sp|A6U3K3|RF1_STAA2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039995|sp|A5IUR3|RF1_STAA9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039996|sp|A8YY83|RF1_STAAT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|13701912|dbj|BAB43204.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus N315] gi|14247891|dbj|BAB58280.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Mu50] gi|21205213|dbj|BAB95907.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MW2] gi|49245354|emb|CAG43829.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MSSA476] gi|57286326|gb|AAW38420.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus COL] gi|87126769|gb|ABD21283.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203580|gb|ABD31390.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741638|gb|ABQ49936.1| bacterial peptide chain release factor 1 (bRF-1) [Staphylococcus aureus subsp. aureus JH9] gi|149947085|gb|ABR53021.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus JH1] gi|150375034|dbj|BAF68294.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus str. Newman] gi|156722568|dbj|BAF78985.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Mu3] gi|160369132|gb|ABX30103.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725232|gb|EES93961.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728956|gb|EES97685.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus TCH130] gi|257787848|gb|EEV26188.1| peptide chain release factor 1 [Staphylococcus aureus A9781] gi|257841377|gb|EEV65821.1| peptide chain release factor 1 [Staphylococcus aureus A9763] gi|257841966|gb|EEV66398.1| peptide chain release factor 1 [Staphylococcus aureus A9719] gi|257849296|gb|EEV73275.1| peptide chain release factor 1 [Staphylococcus aureus A9299] gi|257852529|gb|EEV76447.1| peptide chain release factor 1 [Staphylococcus aureus A8115] gi|257855507|gb|EEV78444.1| peptide chain release factor 1 [Staphylococcus aureus A6300] gi|257856596|gb|EEV79502.1| peptide chain release factor RF1 [Staphylococcus aureus A6224] gi|257864404|gb|EEV87150.1| peptide chain release factor 1 [Staphylococcus aureus A5937] gi|259159490|gb|EEW44540.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3] gi|259162650|gb|EEW47217.1| peptide chain release factor 1 [Staphylococcus aureus D30] gi|262076044|gb|ACY12017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus ED98] gi|269941717|emb|CBI50124.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus TW20] gi|282589348|gb|EFB94440.1| peptide chain release factor 1 [Staphylococcus aureus A10102] gi|282593297|gb|EFB98294.1| peptide chain release factor 1 [Staphylococcus aureus A9765] gi|282762850|gb|EFC02984.1| peptide chain release factor 1 [Staphylococcus aureus A8117] gi|285817782|gb|ADC38269.1| Peptide chain release factor 1 [Staphylococcus aureus 04-02981] gi|294823036|gb|EFG39468.1| peptide chain release factor 1 [Staphylococcus aureus A9754] gi|294968073|gb|EFG44100.1| peptide chain release factor 1 [Staphylococcus aureus A8819] gi|296885261|gb|EFH24201.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177046|gb|EFH36301.1| peptide chain release factor 1 [Staphylococcus aureus A8796] gi|300888266|gb|EFK83457.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus TCH70] gi|302751999|gb|ADL66176.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342158|gb|EFM08058.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830470|emb|CBX35312.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128789|gb|EFT84789.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus CGS03] gi|315196948|gb|EFU27290.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus CGS01] gi|320140710|gb|EFW32562.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143686|gb|EFW35463.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MRSA177] gi|329314803|gb|AEB89216.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus T0131] gi|329723967|gb|EGG60491.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 21189] gi|329726324|gb|EGG62792.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 21172] gi|329729314|gb|EGG65722.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 21193] Length = 358 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 121/347 (34%), Positives = 192/347 (55%), Gaps = 17/347 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD D +R LN DP + + + + +E+ L + K ++ L D Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125 +L ++++ +L+E S+ ++ LE E K L+ + D D +E+ A A Sbjct: 61 IEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKIL--LIPKDPNDDKDVIVEIRAAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L+RMY+++AE + FKTE +E + + G K + + G AY LK E Sbjct: 119 GGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFEN 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNT Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY++++Q EE K+ Sbjct: 238 TDSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSA 294 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +G G +IR+Y P V D R + +++G L++ + A Sbjct: 295 VGTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDA 340 >gi|134301001|ref|YP_001114497.1| peptide chain release factor 1 [Desulfotomaculum reducens MI-1] gi|134053701|gb|ABO51672.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfotomaculum reducens MI-1] Length = 356 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 119/338 (35%), Positives = 190/338 (56%), Gaps = 13/338 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALE 78 R L ++ DP + + + + L++ L + K+ ++ L +N +LE LE Sbjct: 11 RFEQLESQISDPEVMADRAKWQQLVKSHSDLAEVVDVFRQYKKAKEDLQENKQMLEDKLE 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136 D +++ + L K+E + + + LL D + +E+ G GG E+ +A Sbjct: 71 PDFREMVELEIEELTS-KIEEQENKLKILLLPKDPNDDKNVIMEIRGGTGGDEAALFAGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY+R+AEK+ ++TE ++ ++ + G K T +I+G A+ LK E GVHR+ R+ Sbjct: 130 LFRMYSRYAEKKGWRTEIIDANETDLGGFKEVTFVIEGKGAFSTLKFESGVHRVQRVPAT 189 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P ++ ++I+I+ +D RID + ASG GGQ VNTT SAVRITHIP Sbjct: 190 ESGGRIHTSAATVAVLPEAEE-VDIDINANDIRIDLFCASGPGGQCVNTTQSAVRITHIP 248 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG VV CQ E+SQHKNK +A +LRA+L L+ + E+ I + K+ +G G +IR Sbjct: 249 TGTVVSCQDEKSQHKNKDKAMRVLRARL--LDKAQDEQQKAIAGARKSMVGSGDRSERIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +Y P + D R + VL GDLD+ + A + Sbjct: 307 TYNF-PQNRITDHRIGLTLHRLEYVLQGDLDELIDALI 343 >gi|254447802|ref|ZP_05061267.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015] gi|198262582|gb|EDY86862.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015] Length = 358 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 121/338 (35%), Positives = 187/338 (55%), Gaps = 13/338 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N V R + DP + + + L +E L+ E Q + DNL E Sbjct: 10 ENLVARHEEVGMLLSDPDVINDQNRFRDLSKEYAELEPVTKTFSEYQTQ-SDNLSTAEEM 68 Query: 77 LEEDDCSILQETSDNLQRIKLE--VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L++ D + + + R+++E + Q L S D+++ Y+E+ AG GG E+ +A Sbjct: 69 LDDPDMKEMAQEEIDSARVEIERLEQELQILLLPSDPHDNSNIYVEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE + ++ E +GE G K I G A+ +K E G HR+ R+ Sbjct: 129 GDLLRMYTRYAENQGWRVELQAESEGEHGGYKEVIARIIGQGAFSKMKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P +D+ +I+ +D RIDT+RASGAGGQHVN TDSA+RITH Sbjct: 189 ETESQGRIHTSAATVAIMPEIDEVEAPDINPADLRIDTFRASGAGGQHVNKTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLY--ELELQKREEIANIGESSKTEIGWG--- 309 +PTG+VV+ Q ERSQHKN+A+A + L++K+ E + Q +E+ A + K+ +G G Sbjct: 249 VPTGIVVESQAERSQHKNRARAMSQLQSKIIQGERDKQAQEQAA----TRKSLVGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P V D R N+ DV+ G L+ + Sbjct: 305 ERIRTYNF-PQGRVTDHRINLTLYKLDDVMGGGLEQVI 341 >gi|317121004|ref|YP_004101007.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter marianensis DSM 12885] gi|315590984|gb|ADU50280.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter marianensis DSM 12885] Length = 381 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 114/330 (34%), Positives = 179/330 (54%), Gaps = 21/330 (6%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP WQ L +ER L+ + + ++ D L E DD + Sbjct: 52 DPRRWQP------LAQERAELEPLVDAYRRWREAGADLEAARALLRETDDADEHAYLTAE 105 Query: 92 LQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 ++R LE E ++ E L D D +E+ AG GG E+ +A L RMY R+A Sbjct: 106 VER--LEAERQRLERTLRSLLLPRDPRDQRDVIMEIRAGTGGEEAALFAGDLFRMYQRYA 163 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E++ ++TE + + + G K + G A+ LK E GVHR+ R+ ++ R HTS Sbjct: 164 ERQGWRTEVMAATESDLGGFKEVVFAVSGRGAFSRLKHESGVHRVQRVPVTEAAGRIHTS 223 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 +++ V P ++ +E++I D IDT+ ASG GGQHVN T+SAVRITH PTG+VV CQ Sbjct: 224 TATVAVLPEAEE-VEVQIDPDDLEIDTFAASGPGGQHVNKTESAVRITHKPTGIVVTCQD 282 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 ERSQHKN+A+A +LRA+L + ++++E + + ++++G G +IR+Y + + Sbjct: 283 ERSQHKNRARAMKILRARLLDYYTRRQQE--ELSQQRRSQVGTGERSEKIRTYNFRENR- 339 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R + +++DGDLD+ + A A Sbjct: 340 VTDHRIGLTLYRLQEIMDGDLDELLDALAA 369 >gi|221124304|ref|XP_002161242.1| PREDICTED: hypothetical protein [Hydra magnipapillata] Length = 281 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 106/248 (42%), Positives = 146/248 (58%), Gaps = 14/248 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ A++E+ AG GG ES +A L RMYTR+ + + +TE + + E G K L I Sbjct: 19 DARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLRTEIMSASESELGGYKEVVLRI 78 Query: 173 KGP--------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +G AYG LK E G HR+ R+ ++ R HTS +I V D++ I+I+ Sbjct: 79 EGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIHTSACTIAVLAEQDEAEAIKIN 138 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +CQ RSQH NKAQA +L A++ Sbjct: 139 PSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDGRSQHSNKAQALKVLTARI 198 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +E + + E A K+ +G G +IR+Y P + D R N+ ++G Sbjct: 199 HEKD--RSERAAKDAAERKSLVGSGDRSDRIRTYNY-PQGRLTDHRINLTLYKLDRAMEG 255 Query: 342 DLDDFMKA 349 DLDD ++A Sbjct: 256 DLDDVIEA 263 >gi|146277160|ref|YP_001167319.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17025] gi|166223594|sp|A4WRK0|RF1_RHOS5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145555401|gb|ABP70014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter sphaeroides ATCC 17025] Length = 351 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 128/340 (37%), Positives = 187/340 (55%), Gaps = 18/340 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V+R FL + E L RE L ++ I + L D L E L + Sbjct: 11 VRRFEFLEARLSA---GAAPAEIAALSREYAELKPVVAEIAAYRTALED-LAEAEAMLAD 66 Query: 80 DDCSILQETSDNLQRIKL---EVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135 + L E D L R++ E+E +LL +A D+ A LE+ G GG E+ +A Sbjct: 67 PEMRALAE--DELPRLRARIPEMEQALRLALLPRDAADARPAILEIRPGTGGEEAALFAG 124 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LLRMY R+AE + ++ E L++ E GI+ AT I+G A+ LK E GVHR+ R+ Sbjct: 125 DLLRMYQRYAEAQGWRFELLDLAPSELGGIREATARIEGEGAFARLKYESGVHRVQRVPE 184 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS +++ V P ++ ++I I +D RIDT R+SGAGGQHVNTTDSAVRITH+ Sbjct: 185 TEAQGRIHTSAATVAVLPEAEE-VDIAIPAADIRIDTMRSSGAGGQHVNTTDSAVRITHL 243 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV E+SQH+N+ A +LRA+LY+LE Q+ E + K ++G G +I Sbjct: 244 PTGIVV-TSSEKSQHRNREIAMQVLRARLYDLERQRLAEARSA--DRKAQVGSGDRSERI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+Y P + D R N+ + ++ GDL + + A A Sbjct: 301 RTYNF-PQGRMTDHRINLTLYALPQIMAGDLAEVIAALTA 339 >gi|83953606|ref|ZP_00962327.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1] gi|83841551|gb|EAP80720.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1] Length = 351 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 109/256 (42%), Positives = 150/256 (58%), Gaps = 14/256 (5%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L EAD A LE+ G GG E+ +A LLRMY R+AE R +K E +E E Sbjct: 92 QLALLPRDEADKKPAMLEIRPGTGGDEAALFAADLLRMYQRYAEARGWKFELIEQQFTEL 151 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G+K IKG N + LK E GVHR+ R+ +S R HTS +++ V P +D ++I Sbjct: 152 GGVKEVVAHIKGENVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAED-VDIH 210 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+A Sbjct: 211 IDANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKA 269 Query: 283 KLYELELQKRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +LY++E Q+ + A +G ++E +IR+Y P + D R N+ Sbjct: 270 RLYDMERQRVDSERSASRAAQVGSGDRSE-----RIRTYNF-PQGRLTDHRINLTLYRLE 323 Query: 337 DVLDGDLDDFMKATLA 352 V+ GDLD+ + A A Sbjct: 324 AVMQGDLDEIVDALTA 339 >gi|210608516|ref|ZP_03287892.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787] gi|210153007|gb|EEA84013.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787] Length = 358 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 118/348 (33%), Positives = 197/348 (56%), Gaps = 12/348 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68 +FD D+ + R L ++ ++P + + + LM+E+ L A + K + + D Sbjct: 3 MFDKLDDLLIRFEELMSELQEPDVANDQNRFRKLMKEQSDLAPIVEAYNEYKSAKQAITD 62 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 + +LE+ +E+ + +E + ++ E+E++ LL + D + +E+ AGAGG Sbjct: 63 SEEMLEMESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A + RMY +AE R +KTE + + G K ++ G Y +K E GV Sbjct: 123 DESALFAAEVYRMYVHYAESRHWKTEMISFSENGIGGFKEVVFMVSGQGVYSRMKYESGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P ++ +++ I E D RID RASG GGQ VNTTD Sbjct: 183 HRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIDEKDIRIDVMRASGNGGQCVNTTD 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K++ E+ +++IG Sbjct: 242 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAE--AEARRSQIG 299 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V + R + ++++GDLD+ + + +A Sbjct: 300 TGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDNIMNGDLDEIIDSLIA 346 >gi|260220347|emb|CBA27793.1| Peptide chain release factor 1 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 329 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 106/248 (42%), Positives = 146/248 (58%), Gaps = 14/248 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ A++E+ AG GG ES +A L RMYTR+ + + +TE + + E G K L I Sbjct: 67 DARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLRTEIMSASESELGGYKEVVLRI 126 Query: 173 KGPN--------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +G AYG LK E G HR+ R+ ++ R HTS +I V D++ I+I+ Sbjct: 127 EGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIHTSACTIAVLAEQDEAEAIKIN 186 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +CQ RSQH NKAQA +L A++ Sbjct: 187 PSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDGRSQHSNKAQALKVLTARI 246 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +E + + E A K+ +G G +IR+Y P + D R N+ ++G Sbjct: 247 HEKD--RSERAAKDAAERKSLVGSGDRSDRIRTYNY-PQGRLTDHRINLTLYKLDRAMEG 303 Query: 342 DLDDFMKA 349 DLDD ++A Sbjct: 304 DLDDVIEA 311 >gi|154502573|ref|ZP_02039633.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149] gi|153796765|gb|EDN79185.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149] Length = 356 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 150/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A + RMY +AE R+++TE + +++ G K +I Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAAEVYRMYLHYAESRRWRTEMISLNENGIGGFKECVFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E GVHR+ R+ +S R HTS ++ V P +D +++ I E D RID Sbjct: 166 TGQGAYSRMKYESGVHRVQRVPETESGGRIHTSTITVAVMPEAED-VDVVIDEKDIRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K+ Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQ 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + E+ +++IG G +IR+Y P V D R + +L+GDLD+ + + Sbjct: 285 QSAE--AEARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEVIDS 341 Query: 350 TLA 352 +A Sbjct: 342 LIA 344 >gi|168203426|gb|ACA21561.1| protein release factor class I [Candidatus Pelagibacter ubique] Length = 356 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 103/247 (41%), Positives = 151/247 (61%), Gaps = 7/247 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD +A +E+ AG GG E+ +A L +MY + + K+K+ E + I E G+K Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFAGDLFKMYEKVSHKKKWLVEIISISKSEAGGLKEVIA 164 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG N Y LK E GVHR+ R+ ++ R HTS +++ V P ++ ++++I++SD RI Sbjct: 165 SIKGTNIYSTLKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDLKINDSDLRI 223 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +RA G GGQ VNTTDSAVRITHIPTG+ V Q E+SQHKNKA+ +LRA+LYELE Sbjct: 224 DVFRAGGPGGQSVNTTDSAVRITHIPTGLSVSQQDEKSQHKNKAKGMKILRARLYELERT 283 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + ++ + K++IG G +IR+Y P V D R N+ + L+G+ D M Sbjct: 284 RIDQ--ERSQDRKSKIGTGDRSERIRTYNF-PQGRVTDHRINLTIHKLEEFLEGEAFDEM 340 Query: 348 KATLAIK 354 +L ++ Sbjct: 341 IESLTLQ 347 >gi|163743155|ref|ZP_02150537.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10] gi|161383572|gb|EDQ07959.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10] Length = 351 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 164/296 (55%), Gaps = 16/296 (5%) Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYK-QFESLLSGEADSNDAYLEVH 122 RL +L E L + D + L E R L E E+ Q L EAD+ A LE+ Sbjct: 52 RLLSDLEEAEQMLADPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIR 111 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+ +A LLRMY R+AE R + E +E E G+K +KG N + LK Sbjct: 112 PGTGGDEAALFAGDLLRMYQRYAEARGWGIEIIEEQTTELGGLKEVVAHVKGENVFARLK 171 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S R HTS +++ V P +D +++ I D RIDT RASGAGGQH Sbjct: 172 YESGVHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDLRIDPGDLRIDTMRASGAGGQH 230 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK------REEIA 296 VNTTDSAVRITHIPTG++V E+SQH+N+ A ++R +LY+LE Q+ + + Sbjct: 231 VNTTDSAVRITHIPTGIIV-VSSEKSQHRNREIAMQVMRTRLYDLERQRIDSERSADRAS 289 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G ++E +IR+Y P + D R N+ ++ GDLD+ + A A Sbjct: 290 QVGSGDRSE-----RIRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTA 339 >gi|258406203|ref|YP_003198945.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692] gi|257798430|gb|ACV69367.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692] Length = 356 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 117/299 (39%), Positives = 173/299 (57%), Gaps = 20/299 (6%) Query: 56 ISFIKEIQDRLCD-NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEA 112 ++ I+E QD L D + L ELA EE S L+ + L + + + LL Sbjct: 55 LTGIEENQDVLSDGDQELRELAKEE--LSALETRQEEL--------HARLQKLLLPKDPM 104 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ + LLRMYTR+AE +K E + H G+K I Sbjct: 105 DDKNIILEIRAGTGGEEAALFVADLLRMYTRYAETMHWKVELMNSHPTGSGGMKEVIASI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E GVHR+ R+ +S R HTS ++ + P ++ +++EI S+ RID Sbjct: 165 SGASVYSRLKYESGVHRVQRVPSTESQGRIHTSAVTVAILPEAEE-VDVEIDPSELRIDY 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVRITHIP+GVVV CQ E+SQHKNKA+A +LR+++ L+ ++ Sbjct: 224 FRASGPGGQSVNTTDSAVRITHIPSGVVVSCQDEKSQHKNKAKAMKVLRSRI--LKAKQE 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E + S ++++G G +IR+Y P + D R N+ S +VL G++D+ ++ Sbjct: 282 EAKKELDASRRSQVGSGDRSERIRTYNF-PQGRITDHRINLTLYSLENVLAGNMDEVIE 339 >gi|160900908|ref|YP_001566490.1| peptide chain release factor 1 [Delftia acidovorans SPH-1] gi|238687199|sp|A9BP60|RF1_DELAS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160366492|gb|ABX38105.1| peptide chain release factor 1 [Delftia acidovorans SPH-1] Length = 360 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 103/246 (41%), Positives = 147/246 (59%), Gaps = 6/246 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +AYLE+ AG GG ES +A L RMYTR + +K E + ++ E G K L + Sbjct: 107 DARNAYLEIRAGTGGDESALFAGDLARMYTRHCDAVGWKVEIMSANESELGGYKEVVLRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + YG L+ E G HR+ R+ ++ R HTS ++ V P D++ I ++ +D RIDT Sbjct: 167 EGTDVYGRLRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDETQAITLNPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+ H+PTG+V +CQ RSQH NKA+A +L+A+L E E +R Sbjct: 227 FRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARLQEKERSER 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A K IG G +IR+Y P + D R N+ V++GDL D + A Sbjct: 287 E--AKEAALRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTIYKLLAVMEGDLGDVLDA 343 Query: 350 TLAIKK 355 A ++ Sbjct: 344 LQAARE 349 >gi|15616790|ref|NP_240002.1| peptide chain release factor 1 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681545|ref|YP_002467930.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682101|ref|YP_002468485.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471228|ref|ZP_05635227.1| peptide chain release factor 1 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11134308|sp|P57268|RF1_BUCAI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790868|sp|B8D8X1|RF1_BUCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790869|sp|B8D775|RF1_BUCAT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|25299668|pir||H84949 peptide chain release factor 1 [imported] - Buchnera sp. (strain APS) gi|10038853|dbj|BAB12888.1| peptide chain release factor 1 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621834|gb|ACL29990.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624388|gb|ACL30543.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085914|gb|ADP65996.1| peptide chain release factor 1 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087068|gb|ADP67148.1| peptide chain release factor 1 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 361 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 103/236 (43%), Positives = 144/236 (61%), Gaps = 8/236 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ + GG ES +A L RMY R+AE +K E + + E+ G K I Sbjct: 107 DKHSCFIEIRSATGGDESSIFAGELFRMYLRYAESYSWKVEIMNTSESEKGGFKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A G LK E G HR+ R+ +S R HTS ++ V PV + + EI+ SD +IDT Sbjct: 167 TGRGACGRLKFESGGHRVQRVPETESQGRIHTSTCTVAVMPVTPKTEKEEINSSDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291 +R+SGAGGQHVNTTDSA+RITHIPTG VV+CQ ERSQHKNKA+A ++L A++Y +L+K Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGNVVECQDERSQHKNKAKALSILSARVYAAKLEKD 286 Query: 292 REEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 R+E +++ K +G G + R+Y P + D R N+ +VL G LD Sbjct: 287 RQESSSM---RKILLGTGERSDRNRTYNF-PQNRITDHRINLSIYKLDEVLQGKLD 338 >gi|258453172|ref|ZP_05701163.1| peptide chain release factor 1 [Staphylococcus aureus A5948] gi|257859118|gb|EEV81975.1| peptide chain release factor 1 [Staphylococcus aureus A5948] Length = 358 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 121/347 (34%), Positives = 191/347 (55%), Gaps = 17/347 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKGKKEELAD 60 Query: 72 LLELALEEDD---CSILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125 + E+ E DD +L+E S+ ++ LE E K L+ + D D +E+ A A Sbjct: 61 IEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKIL--LIPKDPNDDKDVIVEIRAAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L+RMY+++AE + FKTE +E + + G K + + G AY LK E Sbjct: 119 GGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFEN 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNT Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY++++Q EE K+ Sbjct: 238 TDSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSA 294 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +G G +IR+Y P V D R + +++G L++ + A Sbjct: 295 VGTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDA 340 >gi|325263710|ref|ZP_08130443.1| peptide chain release factor 1 [Clostridium sp. D5] gi|324030748|gb|EGB92030.1| peptide chain release factor 1 [Clostridium sp. D5] Length = 357 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 194/332 (58%), Gaps = 17/332 (5%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALEEDDCSIL-Q 86 ++P + + + + LM+E+ L+ + +E + + D+L +LE +E+ + + Sbjct: 20 QEPDVANDPVRFRKLMKEQSDLNPIVEAYREYKKSKQNIEDSLAMLEEESDEEMREMAKE 79 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTR 143 E +D+ R++ E +Q +L D ND +E+ AGAGG E+ +A + RMY Sbjct: 80 ELNDSKARVE---ELEQELKILLLPKDPNDDKNVIVEIRAGAGGDEAALFAAEIYRMYVH 136 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE R++K E + +++ G K +I G AY LK E GVHR+ R+ +S R H Sbjct: 137 YAEGRRWKVEMISLNENGIGGFKECVFMITGQGAYSRLKYESGVHRVQRVPETESGGRIH 196 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS ++ + P ++ +++ I E D RID RASG GGQ VNTTDSAVR+TH PTG+V+ Sbjct: 197 TSTITVAIMPEAEE-VDVVIEEKDIRIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYS 255 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q E+SQ +NK +A+ +LR+KL++LEL+K++ A+ E+ +++IG G +IR+Y P Sbjct: 256 QTEKSQLQNKEKAFRLLRSKLFDLELEKQQ--ASEAEARRSQIGTGDRSEKIRTYNF-PQ 312 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R + +L+GDLD+ + + +A Sbjct: 313 GRVTDHRIKLTLHKLDTILNGDLDEIIDSLIA 344 >gi|218133361|ref|ZP_03462165.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC 43243] gi|217992234|gb|EEC58238.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC 43243] Length = 363 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 149/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGAGG E+ +A L RMYT +AE R++K E + + G+K ++ Sbjct: 112 DDKDIIVEIRAGAGGDEAALFAAELFRMYTHYAESRRWKVEVVNSDETGIGGMKEIEFMV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E GVHR+ R+ +S R HTS +++ V P ++ ++++I E D RID Sbjct: 172 KGQGAYSVLKYESGVHRVQRVPETESGGRIHTSTATVAVMPEAEE-VDVQIDEKDIRIDV 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY++E QK Sbjct: 231 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQKA 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + ++ +++IG G +IR+Y P V D R + ++DGD+ + + A Sbjct: 291 HDAE--ADARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMDGDIQEIIDA 347 Query: 350 TLA 352 +A Sbjct: 348 CIA 350 >gi|303256163|ref|ZP_07342179.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47] gi|331001217|ref|ZP_08324843.1| peptide chain release factor 1 [Parasutterella excrementihominis YIT 11859] gi|302860892|gb|EFL83967.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47] gi|329568944|gb|EGG50740.1| peptide chain release factor 1 [Parasutterella excrementihominis YIT 11859] Length = 360 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 121/340 (35%), Positives = 185/340 (54%), Gaps = 29/340 (8%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---------IQDRLCDNL 70 V+RL ++ +DP + N+ + + L +ER ++ + KE + + + Sbjct: 13 VRRLEEIDQNLQDPDVTSNMDQFRALSKERAEIEPVVLKAKEYEQAEEDLAAAEEMLSDE 72 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGG 127 + E A EE ++ T +++I E+E +L D ND YLE+ AG GG Sbjct: 73 EMKEFASEE-----IKATKKAIEQISSELE------ILLLPKDPNDEKNIYLEIRAGTGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A L RMY+R+AE++K++ E + + G K + I G AY LK E G Sbjct: 122 DESALFAGDLFRMYSRYAERQKWQVEFVSASPSDLGGYKEIVVKIVGQGAYSKLKFESGG 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P D+ ++ I S+ RID YRASGAGGQH+ T+ Sbjct: 182 HRVQRVPETESQGRVHTSACTVAVLPEADEIGDVVIDPSELRIDVYRASGAGGQHIQKTE 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV+CQ ERSQHKNK +A +L ++++ ++ + + A K+ IG Sbjct: 242 SAVRITHLPTGIVVECQDERSQHKNKERAMGVLISRIHAAQVAEVQ--AKESSMRKSLIG 299 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 G +IR+Y P V D R N+ ++DGDLD Sbjct: 300 SGDRSERIRTYNY-PQGRVTDHRINLTLYKLDSIMDGDLD 338 >gi|34495535|ref|NP_899750.1| peptide chain release factor 1 [Chromobacterium violaceum ATCC 12472] gi|46576724|sp|Q7P1Y2|RF1_CHRVO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|34101390|gb|AAQ57759.1| peptide chain release factor I [Chromobacterium violaceum ATCC 12472] Length = 358 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 146/243 (60%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A LLRMYTR+AE+ +++ E + + + G K + + Sbjct: 107 DDKNIFLEIRAGTGGDEAALFAADLLRMYTRYAERNRWQVEIVSASESDLGGYKEVIVRL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ V D+ E+ ++ +D RIDT Sbjct: 167 VGQGAYSRLKFESGGHRVQRVPATETQGRIHTSACTVAVMAEADEIAEVVLNPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRITHIPTG+V +CQ RSQH NKA A +L A++Y+++L R Sbjct: 227 FRASGAGGQHINKTDSAVRITHIPTGIVAECQDGRSQHANKASAMQVLAARIYDIQL--R 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ K+ IG G +IR+Y P + D R N+ V+DGDL + A Sbjct: 285 EKNQKEAAERKSLIGSGDRSERIRTYNY-PQGRITDHRINLTLYKLDYVMDGDLAELTDA 343 Query: 350 TLA 352 +A Sbjct: 344 LIA 346 >gi|296119521|ref|ZP_06838079.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM 20306] gi|295967404|gb|EFG80671.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM 20306] Length = 358 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 115/289 (39%), Positives = 169/289 (58%), Gaps = 17/289 (5%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQ 131 E+A E+ D Q+ ++ L+ + LE+E +Q LL+ E DS D +E+ AGAGG E+ Sbjct: 66 EMAYEDHD---FQDEAERLEGVVLELE-EQLADLLAPRDEHDSEDIIMEIKAGAGGEEAA 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQG 186 +A L RMY R+A+K F E + I++ + G+K T+ K A+ K E G Sbjct: 122 LFAADLARMYERYADKSGFSWEVIGINESDLGGVKDMTITFKSKTPSRDGAWSVFKFEGG 181 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R TS + + VYP D+ E+ I E D R+D YR+SG GGQ VNTT Sbjct: 182 VHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEVHIDEKDLRVDVYRSSGKGGQGVNTT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ+ERSQ +NKA+A +L+A+L ++E + RE A GE +++ Sbjct: 242 DSAVRLTHLPTGLVVTCQRERSQIQNKARAMQVLQARLEQMEREARE--AEAGEQRASQV 299 Query: 307 ---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R + + VLDGD+ + A A Sbjct: 300 RTMDRSERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMGSLIDALQA 347 >gi|297184082|gb|ADI20201.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 360 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 95/238 (39%), Positives = 146/238 (61%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A +E+ GAGG E +A L RMY R+ E R +K L +++G G K + + Sbjct: 108 DDKNALVEIRQGAGGDEGAIFAGDLFRMYQRYCEGRGWKVAVLTMNEGSSGGFKEVSFEV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ +S R HTS +S+ V P ++ +++++ D + DT Sbjct: 168 NGESVYGILKYESGVHRVQRVPATESQGRVHTSAASVVVLPEAEE-VDVDLDMKDVKKDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+ GAGGQHVN T+SAVR+TH+PTG+VV+CQ RSQHKN QA +LR++++++E +K+ Sbjct: 227 YRSQGAGGQHVNKTESAVRLTHLPTGIVVECQDGRSQHKNYEQALKVLRSRMFDMEFKKK 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +E KT + G +IR+Y P V D R + + +DV++GD+ F+ Sbjct: 287 QE--EQAAQRKTMVSTGDRSAKIRTYNY-PQGRVTDHRIGLTSYNLNDVVNGDIQKFI 341 >gi|297180646|gb|ADI16856.1| protein chain release factor a [uncultured alpha proteobacterium HF0010_13E22] Length = 359 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 106/244 (43%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A LEV AG GG E+ +A+ L MY R+A K ++ E +E+ + G K AT I Sbjct: 108 DSRNAILEVRAGTGGDEAALFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + + LK E GVHR+ R+ ++ R HTS +++ V P +D ++I++ +SD RID Sbjct: 168 AGSDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-VDIDVQDSDLRIDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVRITHIPTG+VV Q E+SQHKN+A+A +LRA+LY+ E + Sbjct: 227 FRASGPGGQSVNTTDSAVRITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARL 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 + A S K ++G G +IR+Y P V D R N+ V+ G+ LD+ ++ Sbjct: 287 Q--AERAASRKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVE 343 Query: 349 ATLA 352 A +A Sbjct: 344 ALVA 347 >gi|309782949|ref|ZP_07677669.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA] gi|308918373|gb|EFP64050.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA] Length = 360 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 149/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ AG GG ES +A LLRMYTR+AE+++++ E + + G K + Sbjct: 107 DHRNIFVEIRAGTGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARL 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ ++ R HTS ++ + P D +I+I+ +D RIDT Sbjct: 167 VGEGAYSRLKFESGGHRVQRVPATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N T+SAVRITH+PTG+VV+CQ +RSQH+NK +A +L A+L + Q+R Sbjct: 227 FRASGAGGQHINKTESAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLK--DRQER 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ IG G +IR+Y P V D R N+ ++DGD+D+ + A Sbjct: 285 EAQAKEASARKSLIGSGDRSDRIRTYNF-PQGRVTDHRINLTLYKIDAIMDGDIDELVGA 343 Query: 350 TLA 352 A Sbjct: 344 LAA 346 >gi|110003948|emb|CAK98288.1| peptide chain release factor 1 protein [Spiroplasma citri] Length = 358 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 117/345 (33%), Positives = 190/345 (55%), Gaps = 23/345 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE- 78 ++R + +N + P + +V + L +E+ L+ ++ ++ + +N+ +L LE Sbjct: 13 LKRWNLINEELTKPEIVNDVKKLTSLAKEQAQLEETVALYLNYKN-VLNNINEAKLILET 71 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWA 134 E D +++ + L+ ++ E E ++ D ND E+ AGG E +A Sbjct: 72 EKDYELIELAKEELKTSEIRKEQLAAELKVILLPKDPNDDKNVIFEIRGAAGGDEGNIFA 131 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY ++AE++ +K E +E ++ E G + + ++KG Y +K E G HR+ RI Sbjct: 132 GDLYRMYIKYAEQQHWKVELIEANESEAGGFSTISFMVKGDRVYSKMKFESGAHRVQRIP 191 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P +++ ++ EI +D +IDTYRASGAGGQHVNTTDSAVRITH Sbjct: 192 KTESKGRVHTSTATVAVLPEIEE-VDFEIKTADLKIDTYRASGAGGQHVNTTDSAVRITH 250 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK--------REEIANIGESSKTEI 306 +PTG VV Q RSQH NKA A LR+KLYE + +K R++ G+ S+ Sbjct: 251 LPTGFVVTSQDGRSQHDNKALAMQHLRSKLYEEQQRKINEERWTLRKDAVGTGDRSE--- 307 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ +++G+LD+ + A + Sbjct: 308 ----KIRTYNY-PQNRVTDHRINLTLQKLDQIMEGNLDEIVVALI 347 >gi|221068955|ref|ZP_03545060.1| peptide chain release factor 1 [Comamonas testosteroni KF-1] gi|299531475|ref|ZP_07044881.1| peptide chain release factor 1 [Comamonas testosteroni S44] gi|220713978|gb|EED69346.1| peptide chain release factor 1 [Comamonas testosteroni KF-1] gi|298720438|gb|EFI61389.1| peptide chain release factor 1 [Comamonas testosteroni S44] Length = 359 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 108/259 (41%), Positives = 153/259 (59%), Gaps = 9/259 (3%) Query: 95 IKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 IKLE E ++ LL + D + A++E+ AG GG ES +A L RMYTR+A +K E Sbjct: 90 IKLEDELQRL--LLPKDPDDARPAFVEIRAGTGGDESALFAGDLTRMYTRYAANVGWKVE 147 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + + E G K L I+G N YG L+ E G HR+ R+ ++ R HTS ++ V P Sbjct: 148 VMSASENEIGGYKEVVLRIEGDNVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMP 207 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D++ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H+PTG+V +CQ RSQH NK Sbjct: 208 EPDEAEAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNK 267 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 A+A +L+A++ E E + E A K IG G +IR+Y P + D R N+ Sbjct: 268 AKALQVLQARIQEKE--RSERAAKEAAMRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINL 324 Query: 331 EKTSPSDVLDGDLDDFMKA 349 V++GDL D ++A Sbjct: 325 TLYKLLAVMEGDLGDVIQA 343 >gi|49484342|ref|YP_041566.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MRSA252] gi|82751719|ref|YP_417460.1| peptide chain release factor 1 [Staphylococcus aureus RF122] gi|257426257|ref|ZP_05602672.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 55/2053] gi|257428915|ref|ZP_05605309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 65-1322] gi|257431524|ref|ZP_05607897.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 68-397] gi|257434233|ref|ZP_05610583.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus E1410] gi|257437146|ref|ZP_05613186.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M876] gi|282904787|ref|ZP_06312661.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C160] gi|282906462|ref|ZP_06314313.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Btn1260] gi|282909431|ref|ZP_06317246.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911683|ref|ZP_06319482.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus WBG10049] gi|282914967|ref|ZP_06322747.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M899] gi|282917467|ref|ZP_06325220.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus D139] gi|282920296|ref|ZP_06328020.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C427] gi|282925507|ref|ZP_06333161.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C101] gi|283771286|ref|ZP_06344175.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus H19] gi|283958898|ref|ZP_06376343.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus A017934/97] gi|293509035|ref|ZP_06667822.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 58-424] gi|293510950|ref|ZP_06669649.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M809] gi|293547552|ref|ZP_06672227.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M1015] gi|295428705|ref|ZP_06821331.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589815|ref|ZP_06948455.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus MN8] gi|56749405|sp|Q6GEV7|RF1_STAAR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361615|sp|Q2YUN5|RF1_STAAB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|49242471|emb|CAG41187.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MRSA252] gi|82657250|emb|CAI81691.1| peptide chain release factor 1 [Staphylococcus aureus RF122] gi|257270962|gb|EEV03135.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 55/2053] gi|257274257|gb|EEV05774.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 65-1322] gi|257277765|gb|EEV08435.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 68-397] gi|257280872|gb|EEV11017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus E1410] gi|257283539|gb|EEV13666.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M876] gi|282312908|gb|EFB43309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C101] gi|282316156|gb|EFB46537.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C427] gi|282318669|gb|EFB49026.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus D139] gi|282321170|gb|EFB51501.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M899] gi|282324448|gb|EFB54761.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus WBG10049] gi|282326701|gb|EFB56999.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330412|gb|EFB59930.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Btn1260] gi|282594820|gb|EFB99797.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C160] gi|283459491|gb|EFC06584.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus H19] gi|283789616|gb|EFC28439.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus A017934/97] gi|290919672|gb|EFD96745.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M1015] gi|291094739|gb|EFE25011.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 58-424] gi|291466235|gb|EFF08762.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M809] gi|295127375|gb|EFG57015.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576943|gb|EFH95657.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus MN8] gi|298695392|gb|ADI98614.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus ED133] gi|302333764|gb|ADL23957.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus JKD6159] gi|312437464|gb|ADQ76535.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus TCH60] gi|315193283|gb|EFU23681.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus CGS00] gi|323439333|gb|EGA97057.1| peptide chain release factor 1 [Staphylococcus aureus O11] gi|323442458|gb|EGB00087.1| peptide chain release factor 1 [Staphylococcus aureus O46] Length = 358 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 121/347 (34%), Positives = 191/347 (55%), Gaps = 17/347 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD D +R LN DP + + + + +E+ L + K ++ L D Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125 +L ++++ +L+E S ++ LE E K L+ + D D +E+ A A Sbjct: 61 IEEMLSETDDKEEVEMLKEESSGIKAELPNLEEELKIL--LIPKDPNDDKDVIVEIRAAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L+RMY+++AE + FKTE +E + + G K + + G AY LK E Sbjct: 119 GGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFEN 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNT Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY++++Q EE K+ Sbjct: 238 TDSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSA 294 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +G G +IR+Y P V D R + +++G L++ + A Sbjct: 295 VGTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDA 340 >gi|225386765|ref|ZP_03756529.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme DSM 15981] gi|225047127|gb|EEG57373.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme DSM 15981] Length = 358 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 120/332 (36%), Positives = 194/332 (58%), Gaps = 19/332 (5%) Query: 32 DPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDCSIL-QE 87 DP + Q+ LM+E+ L A K+ + + D+L +LE +E+ + +E Sbjct: 21 DPDVTQDTKRFTKLMKEQADLAPIVEAYKQYKQAKQDVEDSLAMLEEESDEEMREMAKEE 80 Query: 88 TSDNLQRIK-LEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTR 143 +D +RI+ LE E K +L D ND LE+ AGAGG E+ +A L RMYT Sbjct: 81 LADAKKRIEDLEHELK----ILLLPKDPNDDKNIILEIRAGAGGDEAALFAAELYRMYTN 136 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +A+ +++K E + +++ G K ++ G AY LK E GVHR+ R+ +S R H Sbjct: 137 YADSQRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGVHRVQRVPETESGGRIH 196 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ V P ++ ++++I +DCRID RASG GGQ VNTTDSAVR+TH+PTG+V+ Sbjct: 197 TSTATVAVMPEAEE-VDVQIDMNDCRIDVMRASGNGGQCVNTTDSAVRLTHMPTGIVIYS 255 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q E+SQ +NK +A+ +LR+KL+++EL+KR+ ++ E +++IG G +IR+Y P Sbjct: 256 QTEKSQLQNKEKAFRLLRSKLFDIELEKRQ--SSEAEERRSQIGTGDRSEKIRTYNF-PQ 312 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R + +++GD+ + + +A Sbjct: 313 GRVTDHRIKLTLYKIDSIMNGDIQELLDNLIA 344 >gi|307823419|ref|ZP_07653648.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96] gi|307735404|gb|EFO06252.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96] Length = 361 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 94/243 (38%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + ++E+ AG GG E+ ++ L RMY R+AE++ ++TE + G+ G K L + Sbjct: 109 DNRNIFIEIRAGTGGDEAAIFSGDLARMYQRYAERKGWQTEIINESHGDHGGYKEVILRV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS ++ + P VD+ I+I+ +D ++DT Sbjct: 169 AGKDVYSQLKFESGAHRVQRVPETESQGRIHTSACTVAIMPEVDEVDAIDINPADLKVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N T+SA+RITH+PTGVVV+CQ ERSQHKN+A+A ++L ++L E +K Sbjct: 229 FRASGAGGQHINKTESAIRITHVPTGVVVECQDERSQHKNRARAMSLLASRLLSAEQEKH 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 A + K ++G G +IR+Y P + D R N+ D++ G L+ ++ Sbjct: 289 H--AEQSATRKLQVGSGDRSERIRTYNY-PQGRLTDHRINLTLYKLDDIMQGGLEQVIQP 345 Query: 350 TLA 352 ++ Sbjct: 346 LIS 348 >gi|319936941|ref|ZP_08011351.1| peptide chain release factor 1 [Coprobacillus sp. 29_1] gi|319807877|gb|EFW04456.1| peptide chain release factor 1 [Coprobacillus sp. 29_1] Length = 358 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 145/242 (59%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +EV AGG E +A L RMY ++AE + +K E +E + E G + ++ Sbjct: 108 DNKNVIVEVRGAAGGDEGNIFAGDLYRMYVKYAESQGWKVEVMETQESEAGGFSLVSFMV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ ++ R HTS +++ V P ++ +++EI+ D RIDT Sbjct: 168 KGEGVYSKLKFESGSHRVQRVPKTETQGRVHTSTATVLVMPEAEE-VDVEINPGDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N TDSAVRITH+PTG+V Q RSQH NK +A LRA++YE+ +++ Sbjct: 227 YRASGAGGQHINKTDSAVRITHLPTGIVASSQDGRSQHDNKDKAMRALRARVYEMVQREQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE +G +++IG G +IR+Y P V D R + +++G LDD + A Sbjct: 287 EEA--LGSERRSKIGSGDRSEKIRTYNY-PQNRVTDHRIGLTIQQLDRIMEGKLDDVIDA 343 Query: 350 TL 351 + Sbjct: 344 LI 345 >gi|260779385|ref|ZP_05888277.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC BAA-450] gi|260605549|gb|EEX31844.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC BAA-450] Length = 362 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 113/322 (35%), Positives = 184/322 (57%), Gaps = 17/322 (5%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI------- 84 DP + + + + L +E L+ + Q + ++L+ E +EDD + Sbjct: 25 DPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQEDLVAAEEMAKEDDAEMREMAQEE 83 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 ++E + ++R+ E+ Q L D + +LE+ AGAGG E+ +A L RMY+++ Sbjct: 84 IKEAQETIERLNDEL---QILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKF 140 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AEK+ ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HT Sbjct: 141 AEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHT 200 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S ++ + + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ Sbjct: 201 SACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQ 260 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321 ERSQHKNKA+A ++L A++ ++ ++ + A ++ + +G G +IR+Y P Sbjct: 261 DERSQHKNKAKAMSVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRSDRIRTYNY-PQG 317 Query: 322 MVKDLRTNIEKTSPSDVLDGDL 343 V D R N+ ++V++GDL Sbjct: 318 RVSDHRINLTIYRLNEVMEGDL 339 >gi|254461785|ref|ZP_05075201.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2083] gi|206678374|gb|EDZ42861.1| peptide chain release factor 1 [Rhodobacteraceae bacterium HTCC2083] Length = 351 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 107/245 (43%), Positives = 150/245 (61%), Gaps = 8/245 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD+ A +E+ G GG E+ +A LLRMY R++E R +K E +E E GIK T Sbjct: 100 EADARPAMIEIRPGTGGDEAALFAADLLRMYQRYSEARGWKFEIIEEQLTELGGIKEVTG 159 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG N + LK E GVHR+ R+ +S R HTS +++ V P + +++ I+ +D RI Sbjct: 160 HIKGENVFARLKYESGVHRVQRVPTTESGGRIHTSAATVAVLPEAQE-VDLVIAANDIRI 218 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRITHIPTG++V E+SQH+N+ A +LR +LY+ E Q Sbjct: 219 DTMRASGAGGQHVNTTDSAVRITHIPTGIIV-VSAEKSQHRNREIAMQVLRTRLYDAERQ 277 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + +E K+++G G +IR+Y P + D R N+ V++GDLD+ + Sbjct: 278 RIDE--ERSADRKSQVGSGDRSERIRTYNF-PQGRMSDHRINLTLYKLDQVMEGDLDEII 334 Query: 348 KATLA 352 A A Sbjct: 335 DALTA 339 >gi|260879267|ref|ZP_05891622.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034] gi|308089661|gb|EFO39356.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034] Length = 325 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 168/291 (57%), Gaps = 10/291 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + D+L E +EDD + + + Sbjct: 25 DPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQDDLAAAEEMAKEDDEEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+++AEK Sbjct: 84 IKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKYAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 RGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 SQHKNKA+A +L A++ + E ++R A + ++ + +G G +IR+Y Sbjct: 264 SQHKNKAKAMAVLAARIVQAEQERR--AAEVSDTRRNLLGSGDRSDRIRTY 312 >gi|306820801|ref|ZP_07454426.1| peptide chain release factor RF1 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551191|gb|EFM39157.1| peptide chain release factor RF1 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 357 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 126/362 (34%), Positives = 193/362 (53%), Gaps = 40/362 (11%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-------------DNAISF 58 +F+ AV ++ S L K DP + N + + LM+E L ++ I Sbjct: 1 MFENLGAVKEKFSELEKKISDPEIINNQEQWQKLMKEHADLSPVVKKYEEYLKANDDIKG 60 Query: 59 IKEI----QDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 KEI D +L EL+ LEED I+ E +I L L D Sbjct: 61 AKEIIANESDEDLRDLAKEELSGLEEDLTKIIDEL-----KILL---------LPKDPND 106 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + +E+ GAGG E+ +A +L RMY+ +A R++K E + ++ E G K +I Sbjct: 107 DKNVIVEIRGGAGGDEAALFAGVLFRMYSMYAANRRWKVELMSSNETEIGGYKEVVFMIT 166 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G AY LK E GVHR+ R+ +S R HTS ++ V P +D +E+ + +D R+D + Sbjct: 167 GKGAYSRLKFESGVHRVQRVPETESQGRIHTSTVTVAVLPEAED-VEVNLDLNDVRVDVF 225 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SG GGQ VNTTDSAVR+THIPTG+V+ Q E+SQ KNK +A+ +L+AKLY++EL+K++ Sbjct: 226 RSSGNGGQSVNTTDSAVRLTHIPTGIVISMQDEKSQLKNKDKAFKILKAKLYDMELEKKQ 285 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + + K+++G G +IR+Y P V + R + L+GDLD+ + A Sbjct: 286 K--EMASQRKSQVGTGDRAERIRTYNY-PQGRVSEHRIGLNLYKLESFLNGDLDEIIDAL 342 Query: 351 LA 352 + Sbjct: 343 IT 344 >gi|264676913|ref|YP_003276819.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2] gi|262207425|gb|ACY31523.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2] Length = 359 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 108/259 (41%), Positives = 153/259 (59%), Gaps = 9/259 (3%) Query: 95 IKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 IKLE E ++ LL + D + A++E+ AG GG ES +A L RMYTR+A +K E Sbjct: 90 IKLEDELQRL--LLPKDPDDARPAFVEIRAGTGGDESALFAGDLTRMYTRYAANVGWKVE 147 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + + E G K L I+G N YG L+ E G HR+ R+ ++ R HTS ++ V P Sbjct: 148 VMSASENEIGGYKEVVLRIEGDNVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMP 207 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D++ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H+PTG+V +CQ RSQH NK Sbjct: 208 EPDEAEAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNK 267 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 A+A +L+A++ E E + E A K IG G +IR+Y P + D R N+ Sbjct: 268 AKALQVLQARIQEKE--RSERAAKEAAMRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINL 324 Query: 331 EKTSPSDVLDGDLDDFMKA 349 V++GDL D ++A Sbjct: 325 TLYKLLAVMEGDLGDVIQA 343 >gi|258422882|ref|ZP_05685782.1| peptide chain release factor 1 [Staphylococcus aureus A9635] gi|257846906|gb|EEV70920.1| peptide chain release factor 1 [Staphylococcus aureus A9635] Length = 358 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 119/346 (34%), Positives = 191/346 (55%), Gaps = 15/346 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD D +R LN DP + + + + +E+ L + K ++ L D Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 +L ++++ +L+E S ++ +E ++ + LL D D +E+ A AG Sbjct: 61 IEEMLSETDDKEEVEMLKEESSGIKAELPNIE-EELKILLIPKDPNDDKDVIVEIRAAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L+RMY+++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY++++Q EE K+ + Sbjct: 239 DSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G +IR+Y P V D R + +++G L++ + A Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDA 340 >gi|260427219|ref|ZP_05781198.1| peptide chain release factor 1 [Citreicella sp. SE45] gi|260421711|gb|EEX14962.1| peptide chain release factor 1 [Citreicella sp. SE45] Length = 349 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 122/316 (38%), Positives = 175/316 (55%), Gaps = 17/316 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-- 102 L RE L + I E +RL +L E L + + L E R +L K Sbjct: 31 LGREYAELKPVVDQIAE-WNRLQADLTEAEEMLADPEMKALAEEELPALRARLPEAEKAL 89 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L AD+ A LE+ G GG E+ +A L RMY R++E R ++ E +E D E Sbjct: 90 QLALLPRDAADARPAILEIRPGTGGEEAALFAGDLARMYQRYSEARGWRWEVIEEQDTEL 149 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G+K + I+G N + LK E GVHR+ R+ +S R HTS +++ V P ++++I+ Sbjct: 150 GGLKELVVRIEGENVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEA-EAVDID 208 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A N+LRA Sbjct: 209 IASGDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMNVLRA 267 Query: 283 KLYELELQKREEI------ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +LY++E QK ++ A +G ++E +IR+Y P + D R + Sbjct: 268 RLYDMERQKADDARASDRRAQVGSGDRSE-----RIRTYNF-PQGRMTDHRIGLTLYRLE 321 Query: 337 DVLDGDLDDFMKATLA 352 +L GDLD+ + A A Sbjct: 322 AILSGDLDEIVDALTA 337 >gi|330837036|ref|YP_004411677.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta coccoides DSM 17374] gi|329748939|gb|AEC02295.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta coccoides DSM 17374] Length = 354 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 116/347 (33%), Positives = 194/347 (55%), Gaps = 17/347 (4%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDN 69 L D+ + L+ L+ K P +++ K LM+ER HL + +K + +L ++ Sbjct: 2 LEKLDSFEKELAGLDMKISSPDTMKDMNLFKSLMQERSHLVPIVEELQHLKHVSSQLEES 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGA 125 L LL+ E D +++ T + ++ +K EVE + + + +E+ AG Sbjct: 62 LALLK---SETDPDMIEMTKEEIEGLKAEVEASTSRTKVLLIPPDPLSGKNIIMEIRAGT 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMYT +AE + +K E L +++ GIK I G + YG L+ E Sbjct: 119 GGEEAALFAADLYRMYTHYAEAKNWKIEILTLNETGLGGIKEVVCSISGKDVYGSLRWES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS ++ V P +++ +IEI D ++D R+ G GGQ VNT Sbjct: 179 GVHRVQRVPETEAGGRIHTSACTVAVLPEAEET-DIEIRPEDLKVDVMRSGGPGGQSVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+TH+PTG+VV CQ E+SQ KNKA+A +LR++LY++E +K+ + ++ + + Sbjct: 238 TDSAVRMTHLPTGIVVICQDEKSQIKNKAKALRVLRSRLYDMEEEKKAK--ERADARRDQ 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +G G +IR+Y P + D R N+ +++G L++ +A Sbjct: 296 VGSGDRSERIRTYNF-PQNRLTDHRINLTLYKLDLIMNGQLEEVTEA 341 >gi|126739408|ref|ZP_01755101.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6] gi|126719508|gb|EBA16217.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6] Length = 351 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 120/307 (39%), Positives = 174/307 (56%), Gaps = 16/307 (5%) Query: 57 SFIKEIQDRLCDNLILL------ELALEEDDCSIL-QETSDNLQRIKLEVEYK-QFESLL 108 S IK + +++C LL E+ L + D L +E L+ + E+ Q L Sbjct: 38 SEIKPVAEQICAYRQLLADLEEAEVMLADPDMKELAEEEIPTLKAALPDAEHALQLALLP 97 Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 AD+ A LE+ G GG E+ +A LLRMY R+AE R +K E +E E GIK Sbjct: 98 KDAADTRPAMLEIRPGTGGDEASLFAGDLLRMYQRYAEARGWKFEVIEEQATELGGIKEV 157 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + IKG N + +K E GVHR+ R+ +S R HTS +++ V P +D ++I I +D Sbjct: 158 VVHIKGENVFARMKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDIHIDANDL 216 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+ +LY+LE Sbjct: 217 RIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKTRLYDLE 275 Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 Q+ + + +S+ +G G +IR+Y P + D R N+ ++ GDLD+ Sbjct: 276 RQRIDSERSADRASQ--VGSGDRSERIRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDE 332 Query: 346 FMKATLA 352 + A A Sbjct: 333 IIDALTA 339 >gi|323463876|gb|ADX76029.1| peptide chain release factor 1 [Staphylococcus pseudintermedius ED99] Length = 358 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 118/345 (34%), Positives = 185/345 (53%), Gaps = 13/345 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD D +R LN DP + + + +E+ L + K++++ + Sbjct: 1 MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYKQVKEDAEE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++L E D+ +L+E + L+ + E + + D D +E+ AGG Sbjct: 61 IELMLAETDEADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++AE +FK E +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHIPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P V D R + +++G LD+ + A Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIVDA 340 >gi|304321558|ref|YP_003855201.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503] gi|303300460|gb|ADM10059.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503] Length = 360 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 124/321 (38%), Positives = 175/321 (54%), Gaps = 23/321 (7%) Query: 36 WQNVIEAKMLMRE-RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 + V EA +L+ + RQ L +A K + E+A EE + + ++R Sbjct: 40 LKPVAEAALLLTDARQGLLDAEGLTKSTDPEMA------EMAKEE-----IASLTGQIER 88 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ Q L +AD LEV AG GG E+ +A L RMY R+A R ++ E Sbjct: 89 LEADL---QLMLLPKDKADQAPVILEVRAGTGGDEAALFAGDLFRMYQRYAATRGWRVEI 145 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L + G K + G N +G LK E GVHR+ R+ ++ R HTS +++ V P Sbjct: 146 LSATESGVGGYKEIQANVSGDNVFGRLKFESGVHRVQRVPETETQGRIHTSAATVAVLPE 205 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D I+I+I ESD RID +RASG GGQ VNTTDSAVRITHIPTGVVV Q E+SQHKN+A Sbjct: 206 PED-IDIDIQESDLRIDVFRASGPGGQSVNTTDSAVRITHIPTGVVVSQQDEKSQHKNRA 264 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A +LRA+LYE E + A K ++G G +IR+Y P V D R N+ Sbjct: 265 KAMKVLRARLYEAE--RSRVAAERAAERKGQVGSGDRSERIRTYNF-PQGRVTDHRINLT 321 Query: 332 KTSPSDVLDGD-LDDFMKATL 351 V+ G+ +DD + A + Sbjct: 322 LYKLDKVIAGEAVDDLIDALI 342 >gi|304394129|ref|ZP_07376052.1| peptide chain release factor 1 [Ahrensia sp. R2A130] gi|303293569|gb|EFL87946.1| peptide chain release factor 1 [Ahrensia sp. R2A130] Length = 358 Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 123/316 (38%), Positives = 174/316 (55%), Gaps = 14/316 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEVEYKQ 103 L +E LD + I E+Q + L + + D D + + ++ +K +E + Sbjct: 33 LAKEYAELDPVVIKIGEMQAAQSEFADLAGMLADGDTDAEMKEMAQAEMEPLKAAIEEHE 92 Query: 104 FES----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 E L EAD+ +A LE+ AG GG+E+ +A L RMY R AE +K + L Sbjct: 93 AELQILLLPRDEADAKNAILEIRAGTGGSEAALFAGDLFRMYQRHAETSGWKVDVLSESA 152 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 GE G K I G + LK E GVHR+ R+ +S R HTS +++ V P +D + Sbjct: 153 GEVGGYKEIIASINGTGVFARLKFESGVHRVQRVPETESGGRVHTSAATVAVLPEAED-V 211 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +IEI D RIDT RASGAGGQHVNTTDSAVRITHIPTGVVV E+SQH+N+A A Sbjct: 212 DIEIRNEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGVVV-LSTEKSQHQNRANAMKE 270 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336 LR +LY++E QK ++ +S K ++G G +IR+Y P V D R N+ Sbjct: 271 LRTRLYDMERQKVDQ--ERADSRKGQVGSGDRSERIRTYNF-PQGRVSDHRINLTLYKLD 327 Query: 337 DVLDGD-LDDFMKATL 351 ++ G+ LD+ + A + Sbjct: 328 KMIAGEGLDEMLDALI 343 >gi|325660746|ref|ZP_08149374.1| peptide chain release factor 1 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472820|gb|EGC76030.1| peptide chain release factor 1 [Lachnospiraceae bacterium 4_1_37FAA] Length = 356 Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 117/348 (33%), Positives = 199/348 (57%), Gaps = 12/348 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68 +FD ++ + R + + ++P + + + LM+E+ L A + K+ + + D Sbjct: 1 MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 + +LE+ +E+ + +E + ++ E+E++ LL + D + +E+ AGAGG Sbjct: 61 SEEMLEIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A + RMY +AE +++KTE + +++ G K ++ G Y +K E GV Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P ++ +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIEEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K++ E+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAE--AEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R + +L+GDLD+ + + +A Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIA 344 >gi|327481907|gb|AEA85217.1| peptide chain release factor 1 [Pseudomonas stutzeri DSM 4166] Length = 360 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 107/245 (43%), Positives = 151/245 (61%), Gaps = 12/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY+R+AEK+ ++ E L +GE G K + Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S R HTS ++ V P D+ +EI+ +D RIDT Sbjct: 169 EGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPADLRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVN TDSA+RITH+PTG+VV+CQ+ERSQHKN+A+A L AK LQ R Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKALAWLAAK-----LQDR 283 Query: 293 EEIA---NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ A I E+ K +G G +IR+Y P V D R N+ S ++V+ G ++ Sbjct: 284 QDAAAHKEISETRKLLVGSGDRSERIRTYNF-PQGRVTDHRVNLTLYSLNEVIGGAVEQV 342 Query: 347 MKATL 351 ++ L Sbjct: 343 IEPLL 347 >gi|307544472|ref|YP_003896951.1| peptide chain release factor 1 [Halomonas elongata DSM 2581] gi|307216496|emb|CBV41766.1| peptide chain release factor 1 [Halomonas elongata DSM 2581] Length = 363 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 149/243 (61%), Gaps = 13/243 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +LE+ AG GG E+ +A L RMY+R+AE +K E + G++ G K + Sbjct: 109 DAGNVFLEIRAGTGGDEAALFAGDLFRMYSRYAELHGWKVEIVSASHGDQGGYKELISRV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ V P + EI+I ++ R+DT Sbjct: 169 KGEGVYARLKFESGAHRVQRVPATESQGRIHTSACTVAVMPEAAEVGEIDIDPNELRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL----- 287 +RASGAGGQHVNTTDSA+RITH+P+GVVV+CQ+ERSQHKN+A+A ++L A+L + Sbjct: 229 FRASGAGGQHVNTTDSAIRITHLPSGVVVECQEERSQHKNRAKAMSLLAARLKQAAQDSQ 288 Query: 288 -ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345 + Q E + +G ++E +IR+Y P V D R N+ SDV+ G+ LD+ Sbjct: 289 RQQQADERRSLVGSGDRSE-----RIRTYNF-PQGRVTDHRINLTLYKLSDVVGGEGLDE 342 Query: 346 FMK 348 ++ Sbjct: 343 VIE 345 >gi|319893069|ref|YP_004149944.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius HKU10-03] gi|317162765|gb|ADV06308.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius HKU10-03] Length = 358 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 119/346 (34%), Positives = 187/346 (54%), Gaps = 15/346 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + +E+ L + ++ + ++ ++ Sbjct: 1 MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYK-QVKEDAE 59 Query: 72 LLELALEE----DDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +EL L E D+ +L+E + L+ + E + + D D +E+ AG Sbjct: 60 EIELMLAETDDADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+++AE +FK E +E + + G K + + G AY LK E G Sbjct: 120 GDEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDTYR+SGAGGQHVNTT Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDTYRSSGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ + Sbjct: 239 DSAVRITHIPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYAAQRKSAV 295 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G +IR+Y P V D R + +++G LD+ + A Sbjct: 296 GTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIVDA 340 >gi|254455525|ref|ZP_05068954.1| peptide chain release factor 1 [Candidatus Pelagibacter sp. HTCC7211] gi|207082527|gb|EDZ59953.1| peptide chain release factor 1 [Candidatus Pelagibacter sp. HTCC7211] Length = 357 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 102/247 (41%), Positives = 152/247 (61%), Gaps = 7/247 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD +A +E+ AG GG E+ +A+ L +MY + + K+K+ E + I + G+K Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFASDLFKMYEKVSHKKKWALELISISRSDAGGLKEVIA 164 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG N Y LK E GVHR+ R+ ++ R HTS +++ V P ++ ++++I+E+D RI Sbjct: 165 SIKGTNIYSTLKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDLKINEADLRI 223 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +RA G GGQ VNTTDSAVRITHIPTG+ V Q E+SQHKNKA+ +LR++LYELE Sbjct: 224 DVFRAGGPGGQSVNTTDSAVRITHIPTGLTVSQQDEKSQHKNKAKGMKILRSRLYELERS 283 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + ++ + KT+IG G +IR+Y P V D R N+ + L+G+ D M Sbjct: 284 RIDQ--ERSQDRKTKIGTGDRSERIRTYNF-PQGRVTDHRINLTLHRLEEFLEGEAFDEM 340 Query: 348 KATLAIK 354 +L ++ Sbjct: 341 IESLTLQ 347 >gi|332558342|ref|ZP_08412664.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N] gi|332276054|gb|EGJ21369.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N] Length = 351 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 102/244 (41%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ G GG E+ +A LLRMY R+AE + ++ E L++ E GI+ AT Sbjct: 101 ADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATAR 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G A+ LK E GVHR+ R+ ++ R HTS +++ V P ++ +++EI +D RID Sbjct: 161 IEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEE-VDLEIPAADIRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+PTG++V E+SQH+N+ A +LRA+LY+LE Q+ Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHRNREIAMQVLRARLYDLERQR 278 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K ++G G +IR+Y P + D R N+ + ++ GDL + + Sbjct: 279 LADARSA--DRKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVIS 335 Query: 349 ATLA 352 A A Sbjct: 336 ALTA 339 >gi|296775701|gb|ADH42977.1| protein chain release factor A [uncultured SAR11 cluster alpha proteobacterium H17925_38M03] Length = 358 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 102/251 (40%), Positives = 150/251 (59%), Gaps = 7/251 (2%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L E D +A +E+ AG GG E+ + L +MY + K+K+ E + I E G K Sbjct: 101 LPKDEDDDKNAIVEIRAGTGGLEASLFCADLFKMYEKVCSKKKWNLEIINISKSEAGGFK 160 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 + G + Y +LK E GVHR+ RI ++ R HTS +++ V P V++ ++IEI ES Sbjct: 161 EVIFSVNGNDIYSYLKYESGVHRVQRIPETETQGRVHTSAATVAVLPEVEE-VDIEIKES 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+D +RA G GGQ VNTTDSAVRITHIP+GVVV Q E+SQHKNKA+A +LR+++YE Sbjct: 220 DLRVDVFRAGGPGGQSVNTTDSAVRITHIPSGVVVSQQDEKSQHKNKAKALKILRSRVYE 279 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 E +K+++ + +++IG G +IR+Y P V D R N+ + L GD+ Sbjct: 280 AEKRKKDQ--ERSSNRRSQIGSGDRSERIRTYNF-PQGRVTDHRINLTLHKLEEFLSGDI 336 Query: 344 DDFMKATLAIK 354 + M L ++ Sbjct: 337 HEEMNQELRLQ 347 >gi|300716406|ref|YP_003741209.1| peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661] gi|299062242|emb|CAX59359.1| Peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661] Length = 360 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 141/240 (58%), Gaps = 16/240 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLEV AG GG E+ +A L RMY+R+AE R++K E + +DGE G K + Sbjct: 107 DERNCYLEVRAGTGGDEAAIFAGDLFRMYSRYAETRRWKIEIMSTNDGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ + P + ++ EI+ D +IDT Sbjct: 167 IGDGAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAIMPELPEAEMPEINAGDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML--------RAKL 284 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+L Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAETARL 286 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ E R + G+ S R+Y P + D R N+ + + G LD Sbjct: 287 HQEEASTRRNLLGTGDRSDRN-------RTYNY-PQGRITDHRINLTLYRLDEAMQGKLD 338 >gi|326386588|ref|ZP_08208210.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM 19370] gi|326208903|gb|EGD59698.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM 19370] Length = 356 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 109/274 (39%), Positives = 157/274 (57%), Gaps = 13/274 (4%) Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 AL+E D + + + RI+ E+ + L ADS+ A LE+ AG GG E+ Sbjct: 64 ALDEPDADMRALAEEEMARIRAELPEAERRLALAMLPRDNADSHPAMLEIRAGTGGDEAA 123 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A ++ +K E + + + G K + G + LK E GVHR+ Sbjct: 124 LFAADLFRMYERYAAEQGWKVEVISANASDIGGFKEVIAHVAGQGVFAKLKYESGVHRVQ 183 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P D+ +++ I + D +ID YRASGAGGQHVNTTDSAVR Sbjct: 184 RVPVTESGGRIHTSAATVAVLPEPDE-VDVSIDDKDLKIDIYRASGAGGQHVNTTDSAVR 242 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGWG- 309 ITH+PTG+VV Q ERSQHKNKA+A +LR +LY+L +RE+ E+ + +G G Sbjct: 243 ITHLPTGIVVTQQDERSQHKNKAKAMQVLRTRLYDL---RREQAQGAEAEARRAMVGSGD 299 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P V D R N+ ++L G Sbjct: 300 RSERIRTYNF-PQGRVTDHRINLTLHRLPEILAG 332 >gi|331695519|ref|YP_004331758.1| peptide chain release factor 1 [Pseudonocardia dioxanivorans CB1190] gi|326950208|gb|AEA23905.1| Peptide chain release factor 1 [Pseudonocardia dioxanivorans CB1190] Length = 366 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 127/332 (38%), Positives = 182/332 (54%), Gaps = 12/332 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + A+ L R + ++ KE+ D ELA DD + E D Sbjct: 28 DPAVHADPARARRLGRRYAEIGPVVAVAKELASVRDDLAAARELA--ADDPTFGAEADDL 85 Query: 92 LQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 R+ +E + E L+ + D++D LEV +G GG ES +A L+RMYTR+AE R + Sbjct: 86 AARVP-ALEARLAELLVPRDPHDADDVVLEVKSGEGGEESALFAGDLVRMYTRFAESRGW 144 Query: 151 KTEALEIHDGEEAGIKSATLLIKG--PNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTS 205 TE L+ + G K TL ++ P A G W LK E GVHR+ R+ +S R HTS Sbjct: 145 STEILDATTSDLGGYKDVTLSVRARVPAADGVWSALKFEGGVHRVQRVPVTESQGRIHTS 204 Query: 206 FSSIWVYPVVD-DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 + + VYP D IEI ++D R+D +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ Sbjct: 205 AAGVLVYPDTGADDAGIEIDDNDLRVDVFRSSGHGGQSVNTTDSAVRITHLPTGIVVSCQ 264 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMV 323 ERSQ +N+A+A +LR++L L ++ A+ S+ + +IR+Y P + Sbjct: 265 NERSQLQNRARAMEVLRSRLQALAEEEAAARASDARRSQVRTVDRSERIRTYNF-PENRI 323 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 D R + + S VLDGDL D + A +A + Sbjct: 324 ADHRVGYKAHNLSAVLDGDLGDVIAALVAADR 355 >gi|331085530|ref|ZP_08334614.1| peptide chain release factor 1 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407417|gb|EGG86919.1| peptide chain release factor 1 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 358 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 117/348 (33%), Positives = 199/348 (57%), Gaps = 12/348 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68 +FD ++ + R + + ++P + + + LM+E+ L A + K+ + + D Sbjct: 1 MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 + +LE+ +E+ + +E + ++ E+E++ LL + D + +E+ AGAGG Sbjct: 61 SEEMLEIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A + RMY +AE +++KTE + +++ G K ++ G Y +K E GV Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P ++ +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIEEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K++ E+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAE--AEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R + +L+GDLD+ + + +A Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIA 344 >gi|297183483|gb|ADI19614.1| protein chain release factor a [uncultured SAR11 cluster bacterium HF0770_37D02] Length = 358 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 102/238 (42%), Positives = 147/238 (61%), Gaps = 7/238 (2%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L EAD+ +A LE+ AG GG E+ + L +MY + K+K+ E + I E G K Sbjct: 101 LPKDEADAKNAILEIRAGTGGLEATLFVADLYKMYEKVCLKKKWLLEIINISKSEAGGFK 160 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 LLIKG N Y +LK E GVHR+ R+ ++ R HTS +++ V P ++ ++I+I+E Sbjct: 161 EVILLIKGNNIYSFLKFESGVHRVQRVPKTETQGRVHTSAATVAVLPEAEE-VDIKINEK 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID +R+SG GGQ VNTTDSAVRITH+P+GVVV Q E+SQHKN+A+A +LR+++YE Sbjct: 220 DLRIDVFRSSGPGGQSVNTTDSAVRITHLPSGVVVSQQDEKSQHKNRAKAMKILRSRVYE 279 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 E +K+++ K +IG G +IR+Y P V D R N+ + L+G Sbjct: 280 NEREKKDK--ERSRDRKNQIGSGDRSERIRTYNF-PQGRVTDHRINLTLHKLEEFLNG 334 >gi|156389000|ref|XP_001634780.1| predicted protein [Nematostella vectensis] gi|156221867|gb|EDO42717.1| predicted protein [Nematostella vectensis] Length = 273 Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 107/244 (43%), Positives = 153/244 (62%), Gaps = 9/244 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD NDA LEV AG GG E+ +A+ + MY R+A +K+K + L+I + G K A+ Sbjct: 10 EADENDAILEVRAGTGGQEASLFASEMFIMYQRFAAFKKWKFDILDIARSDTGGYKEASA 69 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G +G +K E GVHR+ R+ ++ R HTS ++ V P + +++ IS +D +I Sbjct: 70 SISGYGVFGKMKFEVGVHRVQRVPVTEAQGRVHTSTMTVAVLPQPQE-VDVIISPNDLKI 128 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT+RASGAGGQHVNTTDSAVRITHIP+G+VV Q+ERSQ KNKA+A +LRA+LY +LQ Sbjct: 129 DTFRASGAGGQHVNTTDSAVRITHIPSGMVVSSQEERSQFKNKAKAMQVLRARLY--DLQ 186 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 ++E + + +T+IG +IR+Y P V D R + + L+G L+D Sbjct: 187 RQEADSARVHARRTQIGTAERSEKIRTYNF-PQGRVTDHRIGMTSHTVDKFLEGGVLLED 245 Query: 346 FMKA 349 + A Sbjct: 246 MIDA 249 >gi|254419936|ref|ZP_05033660.1| peptide chain release factor 1 [Brevundimonas sp. BAL3] gi|196186113|gb|EDX81089.1| peptide chain release factor 1 [Brevundimonas sp. BAL3] Length = 355 Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 106/246 (43%), Positives = 151/246 (61%), Gaps = 9/246 (3%) Query: 111 EADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 +AD N A LEV AG GG E+ +A L RMY+R+A R ++ E +G+ G K Sbjct: 100 DADENASAVLEVRAGTGGDEAALFAGDLFRMYSRYAATRGWRIELDSATEGDAGGYKEII 159 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + G +G LK E GVHR+ R+ ++ R HTS +++ V P V+D +EIEI E D R Sbjct: 160 ATVTGDGVFGRLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEVED-VEIEILEKDIR 218 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDT+RASG+GGQHVN TDSAVRITH+PTG+V E+SQH N+ +A LR +LY+++ Sbjct: 219 IDTFRASGSGGQHVNKTDSAVRITHLPTGIVA-TSSEKSQHVNRDKAMKNLRVRLYDMQR 277 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 Q + ++A +S K+++G G +IR+Y P V D R + S +L+GDLD Sbjct: 278 QAK-DLAR-ADSRKSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDPM 334 Query: 347 MKATLA 352 + A +A Sbjct: 335 LNALIA 340 >gi|291320737|ref|YP_003516002.1| peptide chain release factor 1 [Mycoplasma agalactiae] gi|290753073|emb|CBH41049.1| Peptide chain release factor 1 [Mycoplasma agalactiae] Length = 358 Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 102/249 (40%), Positives = 145/249 (58%), Gaps = 16/249 (6%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D + +E+ AGG E+ +A L RMY+++A++ F+ + L + G Sbjct: 107 ENDDKNIIVEIRGAAGGDEANIFAGDLFRMYSKFADELGFRLKILSTNSASAGGFSQIVF 166 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG AY K E GVHR+ R+ +S R HTS +++ V P +DDS+EIEI SD +I Sbjct: 167 SIKGEKAYSKFKFESGVHRVQRVPVTESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKI 226 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +R+SGAGGQ VNTTDSAVRITH+PT +VV Q ERSQ N+ A +L++KLY+LE+Q Sbjct: 227 DVFRSSGAGGQSVNTTDSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQ 286 Query: 291 KREE-------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 K+ E +A G+ S+ +IR+Y P V D R + TS +++G L Sbjct: 287 KKAEEESGYRKLAGHGDRSE-------KIRTYNY-PQDRVTDHRISF-STSLKPIMEGKL 337 Query: 344 DDFMKATLA 352 + A LA Sbjct: 338 TPIIDALLA 346 >gi|51246578|ref|YP_066462.1| peptide chain release factor 1 [Desulfotalea psychrophila LSv54] gi|61214607|sp|Q6AJM5|RF1_DESPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|50877615|emb|CAG37455.1| probable peptide chain release factor 1 (RF-1) [Desulfotalea psychrophila LSv54] Length = 357 Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 123/353 (34%), Positives = 190/353 (53%), Gaps = 31/353 (8%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 LFD +D+ R+ L K DP + + E + ++RE HL + KE + C ++ Sbjct: 2 LFDKFDDLDNRIEHLEGKLSDPEIVNDQKEFQKVVREHAHLSKLNTVYKEYK-TACQDV- 59 Query: 72 LLELALEEDDCSILQETSDN-----LQRIKLE------VEYKQFESLLSGEADSND---A 117 ED+ +IL + ++ L + +LE VE + ++ D ND Sbjct: 60 -------EDNKAILHDDGEDPDLKELAKAELEELNVRIVELDKAIKIILLPKDPNDEKNT 112 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 +LE+ AGAGG E+ + L RMYTR+AE +K E + + G K LI G Sbjct: 113 FLEIRAGAGGDEAALFVADLFRMYTRFAETMGWKVEVMSSNPLGIGGFKEIIALISGEQV 172 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + LK E GVHR+ R+ ++ R HTS ++ + P ++ +E+ I ++ + D +R+SG Sbjct: 173 FSKLKYESGVHRVQRVPETETQGRIHTSAVTVAILPEAEE-VELHIDMNELKFDVFRSSG 231 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PTG+VV CQ E+SQHKNK +A +LRA+L L+ + E A Sbjct: 232 PGGQSVNTTDSAVRITHLPTGLVVICQDEKSQHKNKVKALTVLRARL--LDKLESEHNAK 289 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 I E+ ++++G G +IR+Y P V D R N+ ++ G LD+ + Sbjct: 290 ISEARRSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLYKLETIMGGSLDEVI 341 >gi|313678949|ref|YP_004056688.1| bacterial peptide chain release factor 1 (brf-1) [Oceanithermus profundus DSM 14977] gi|313151664|gb|ADR35515.1| bacterial peptide chain release factor 1 (bRF-1) [Oceanithermus profundus DSM 14977] Length = 358 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 99/241 (41%), Positives = 147/241 (60%), Gaps = 7/241 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD +A +E+ AG GG E+ +A L MYTR+AE+ ++ E LE H + G + + Sbjct: 102 ADVRNAIVEIRAGTGGQEAALFAGNLFEMYTRYAERLGYQVEMLESHPTDLGGFSKVSFM 161 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KGP AYG K E GVHR+ R+ ++ R HTS +++ V P ++S ++E+ S+ RID Sbjct: 162 VKGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATVAVLPEAEES-DVELDMSEVRID 220 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 RASG GGQ VNTTDSAVR+ H PTG+++ Q RSQ KN+ +A ++LR++L LE+++ Sbjct: 221 VMRASGPGGQGVNTTDSAVRVVHEPTGIIITIQDSRSQIKNREKALSILRSRL--LEMKR 278 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 EE A + S +IG G +IR+Y P V D R + + VL G+LD+ + Sbjct: 279 AEEEAALRTSRLAQIGTGERSEKIRTYNF-PQSRVTDHRIHFTTHNLEGVLAGELDELTE 337 Query: 349 A 349 A Sbjct: 338 A 338 >gi|92113653|ref|YP_573581.1| peptide chain release factor 1 [Chromohalobacter salexigens DSM 3043] gi|119361523|sp|Q1QXC6|RF1_CHRSD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91796743|gb|ABE58882.1| bacterial peptide chain release factor 1 (bRF-1) [Chromohalobacter salexigens DSM 3043] Length = 361 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 95/240 (39%), Positives = 152/240 (63%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+++ +LE+ AG GG E+ +A L RMY+R+AEK ++ E + GE+ G K + Sbjct: 109 DASNVFLEIRAGTGGDEAALFAGDLFRMYSRYAEKVGWRIEVINASHGEQGGYKELIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G N Y LK E G HR+ R+ +S R HTS ++ V E+E++ +D R+DT Sbjct: 169 RGDNVYARLKFESGAHRVQRVPATESQGRIHTSACTVAVMAEASAVGEVELNSNDLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 +R+SGAGGQHVNTTDSA+RITH+P+G+VV+CQ+ERSQHKN+A+A +L A+L + ++ Q Sbjct: 229 FRSSGAGGQHVNTTDSAIRITHLPSGLVVECQEERSQHKNRAKAMALLAARLKQSAVDAQ 288 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++++ ++ ++ +G G +IR+Y P + D R N+ DV+ G+L + + Sbjct: 289 RQQQ----ADTRRSLVGSGDRSERIRTYNF-PQGRITDHRINLTLYKLGDVMAGELGEVI 343 >gi|21672964|ref|NP_661029.1| peptide chain release factor 1 [Chlorobium tepidum TLS] gi|28201874|sp|Q8KG45|RF1_CHLTE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21646023|gb|AAM71371.1| peptide chain release factor 1 [Chlorobium tepidum TLS] Length = 357 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/277 (38%), Positives = 170/277 (61%), Gaps = 12/277 (4%) Query: 76 ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 AL E++ LQE L Q++K+ + L EADS +A +E+ AG GG E+ +A Sbjct: 75 ALVEEEAGELQERLPKLEQQLKILL-------LPKDEADSRNAIIEIRAGTGGDEAGLFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 L+RMY R+AE++ + + LE+ +G G +K +L + G N YG LK E GVHR+ R+ Sbjct: 128 ADLMRMYQRYAERQGWSCQTLEVSEGSVPGSLKEVSLEVSGHNVYGILKFESGVHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +S+ V P ++ +++EI + D IDT+R+ G GGQ+VN ++AVRIT Sbjct: 188 PETETQGRIHTSAASVAVLPEAEE-VDVEIRKEDLLIDTFRSGGKGGQNVNKVETAVRIT 246 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQI 312 H+P+G+VV CQ+ERSQ +N+ +A MLR+KLY+L++ ++++ A++ S T +I Sbjct: 247 HVPSGIVVACQEERSQLQNRERAMKMLRSKLYDLQIAEQQKSRADLRRSMVTTGDRSAKI 306 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 R+Y P V D R + ++ G+LD ++A Sbjct: 307 RTYNF-PQSRVTDHRIGFTSHALPQIMQGELDPLIEA 342 >gi|167644945|ref|YP_001682608.1| peptide chain release factor 1 [Caulobacter sp. K31] gi|167347375|gb|ABZ70110.1| peptide chain release factor 1 [Caulobacter sp. K31] Length = 334 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 115/280 (41%), Positives = 168/280 (60%), Gaps = 13/280 (4%) Query: 81 DCSILQETSDNLQRI--KLEVEYKQFESLLSG-EADSN-DAYLEVHAGAGGTESQDWANM 136 D + SD +Q + KL V ++ +L+ + D N A LEV AG GG E+ +A Sbjct: 46 DPEMAAMVSDEIQALDEKLPVMERELALMLAPRDKDENASAILEVRAGTGGDEAALFAGD 105 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY R+A+ + +K E + +GE G K + G +G K E GVHR+ R+ Sbjct: 106 LFRMYQRYAQLQGWKVEVDSVSEGEMGGYKEIIASVTGDGVFGRWKFESGVHRVQRVPAT 165 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P +D +EIEI+++D RIDTYR+SGAGGQHVN TDSAVRITH+P Sbjct: 166 EAQGRIHTSAATVAVLPEAED-VEIEINDADIRIDTYRSSGAGGQHVNKTDSAVRITHLP 224 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TGVVV E+SQH+N+A+A L+A+LY +LQ+ ++ K+++G G +IR Sbjct: 225 TGVVV-TSSEKSQHQNRARAMKNLKARLY--DLQRTALDTARSDARKSQVGSGDRSERIR 281 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 +Y P V D R N+ + V++GD LDD +K +A Sbjct: 282 TYNF-PQGRVTDHRINLTVYNLPKVMEGDALDDIIKPLIA 320 >gi|260062127|ref|YP_003195207.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501] gi|88783689|gb|EAR14860.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501] Length = 358 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 93/232 (40%), Positives = 143/232 (61%), Gaps = 3/232 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A L RMYT++ E R +KT +++ +G G K + Sbjct: 106 DAKDVVMEIRAGTGGDEASIFAGDLFRMYTKYCESRGWKTNVIDLSEGTSGGFKEIHFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS +++ V P +D +++I D RID Sbjct: 166 SGEDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAED-FDVQIDPKDVRIDY 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH+PTG+V QCQ E+SQHKNK +A+ +LR++LY++EL K+ Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHVPTGIVAQCQDEKSQHKNKDKAFKVLRSRLYDMELAKK 284 Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +E +S+ G +IR+Y P V D R + ++++GD+ Sbjct: 285 QEEDAAKRNSQVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDI 335 >gi|302381433|ref|YP_003817256.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC 15264] gi|302192061|gb|ADK99632.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC 15264] Length = 367 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 104/246 (42%), Positives = 150/246 (60%), Gaps = 9/246 (3%) Query: 111 EADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 +AD N A LEV AG GG E+ +A L RMY+R+A R +K E +G+ G K Sbjct: 112 DADENASAVLEVRAGTGGDEAALFAGDLFRMYSRYASTRGWKVELDSATEGDAGGYKEII 171 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + G +G LK E GVHR+ R+ ++ R HTS +++ V P V+D +EI+I + D R Sbjct: 172 ATVTGDGVFGRLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEVED-VEIDIQDKDIR 230 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDTYRASG+GGQHVN TDSAVRITH P+G+VV E+SQH N+ +A LR +LY+++ Sbjct: 231 IDTYRASGSGGQHVNKTDSAVRITHFPSGIVV-TSSEKSQHVNRDKAMKNLRVRLYDMQR 289 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 Q ++ + ++ K+++G G +IR+Y P V D R + S +L+GDLD Sbjct: 290 QMKDNARS--DARKSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDAL 346 Query: 347 MKATLA 352 + A +A Sbjct: 347 LNALIA 352 >gi|295698659|ref|YP_003603314.1| peptide chain release factor 1 [Candidatus Riesia pediculicola USDA] gi|291157243|gb|ADD79688.1| peptide chain release factor 1 [Candidatus Riesia pediculicola USDA] Length = 346 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 122/307 (39%), Positives = 180/307 (58%), Gaps = 13/307 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L RE L IS K+I+ + + +L L+E+ S+ E + L +K +VE + Sbjct: 38 LQREYTKLFKIISNFKKIESIRKEIEEIKKLILDEELKSLALEELNKLINLKKKVENRLR 97 Query: 105 ESLLSG-EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE- 162 L + D D +LE+ AG GG+E+ +A L RMY ++AE +K E + I++ E Sbjct: 98 NQLTPKDQNDRKDCFLEIKAGTGGSEAAIFAKDLFRMYCKYAESCSWKVEIISINEIESG 157 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 +G K I G Y LK E G HR+ RI +S R HTS + + VD S EI+ Sbjct: 158 SGYKEIIAKISGKEVYRKLKFESGGHRVQRIPETESRGRIHTSSCKVAILLKVDAS-EIK 216 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+++D RIDT+R+SGAGGQHVNTT+SA+R+THIPTG+ V+CQ ERSQHKN+A+A ++L A Sbjct: 217 INQNDIRIDTFRSSGAGGQHVNTTNSAIRVTHIPTGISVECQDERSQHKNRAKAMSVLLA 276 Query: 283 KLYELELQKREEIANIGESSKTEIGWGR-----QIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L LEL+K + +S K + +G +IR+Y Q +V D RTN ++ Sbjct: 277 RLKNLELKKVAQ----EKSYKKKFLFGSGERSDRIRTYNFQRGTIV-DHRTNSVTYQINE 331 Query: 338 VLDGDLD 344 V++G L+ Sbjct: 332 VMNGKLE 338 >gi|229176005|ref|ZP_04303501.1| Peptide chain release factor 1 [Bacillus cereus MM3] gi|228607498|gb|EEK64824.1| Peptide chain release factor 1 [Bacillus cereus MM3] Length = 358 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + G+ D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ D +++E L+ + E + +L D ND +EV Sbjct: 61 LRDAKAMLEDKLDADMRDMVKEEVSELE--GQDKELSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEISIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|84686944|ref|ZP_01014828.1| peptide chain release factor 1 [Maritimibacter alkaliphilus HTCC2654] gi|84665141|gb|EAQ11621.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2654] Length = 351 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 125/346 (36%), Positives = 183/346 (52%), Gaps = 24/346 (6%) Query: 16 WDNAVQRLSFLNTKT-------EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 D QR FL K E + + E K ++ E +S I++ + L D Sbjct: 7 LDAITQRFQFLEAKMSQGLSGDEIAEVGREYAELKPVVEEIAAFRQLLSDIEDAEAMLSD 66 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + ELA ED+ L+E R+ + + + L AD+ A +E+ G GG Sbjct: 67 PE-MRELA--EDELPGLRE------RLPVMEQAMRVALLPRDAADARPAMVEIRPGTGGD 117 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A LLRMY R+AE R +K + LE E G+K + G + LK E GVH Sbjct: 118 EASLFAGDLLRMYQRYAEARGWKFDTLEQSLTEVGGVKEVVARVSGDGVFARLKFESGVH 177 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P +D ++I I +D RIDT RASGAGGQHVNTTDS Sbjct: 178 RVQRVPETESGGRIHTSAATVAVLPEAED-VDIHIDPADIRIDTMRASGAGGQHVNTTDS 236 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTG+VV E+SQH+N+ A +L+ +L++ E Q+ + + K ++G Sbjct: 237 AVRITHIPTGIVV-TSSEKSQHRNREIAMQVLKTRLFDAERQRAHD--ERASARKAQVGS 293 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P + D R N+ DV+ GDLD+ + A + Sbjct: 294 GDRSERIRTYNF-PQGRMTDHRINLTLYKLGDVMQGDLDEVIDALI 338 >gi|126462320|ref|YP_001043434.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17029] gi|166223593|sp|A3PJZ6|RF1_RHOS1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|126103984|gb|ABN76662.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter sphaeroides ATCC 17029] Length = 351 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 101/244 (41%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ G GG E+ +A LLRMY R+AE + ++ E L++ E GI+ AT Sbjct: 101 ADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATAR 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 ++G A+ LK E GVHR+ R+ ++ R HTS +++ V P ++ +++EI +D RID Sbjct: 161 VEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEE-VDLEIPAADIRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+PTG++V E+SQH+N+ A +LRA+LY+LE Q+ Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHRNREIAMQVLRARLYDLERQR 278 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K ++G G +IR+Y P + D R N+ + ++ GDL + + Sbjct: 279 LADARSA--DRKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVIS 335 Query: 349 ATLA 352 A A Sbjct: 336 ALTA 339 >gi|229033962|ref|ZP_04188916.1| Peptide chain release factor 1 [Bacillus cereus AH1271] gi|228728388|gb|EEL79410.1| Peptide chain release factor 1 [Bacillus cereus AH1271] Length = 358 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + G+ D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ D +++E L+ + E + +L D ND +EV Sbjct: 61 LRDAKAMLEDKLDADMREMVKEEVSELE--GQDKELSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEISIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|148244818|ref|YP_001219512.1| peptide chain release factor 1 [Candidatus Vesicomyosocius okutanii HA] gi|166223616|sp|A5CW65|RF1_VESOH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146326645|dbj|BAF61788.1| peptide chain release factor RF-1 [Candidatus Vesicomyosocius okutanii HA] Length = 361 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 125/344 (36%), Positives = 192/344 (55%), Gaps = 25/344 (7%) Query: 22 RLSFLNTKTEDPHLWQNV-------IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 RL ++ DP + NV IE L Q +S +K ++D + Sbjct: 15 RLEEVSIMLSDPEVVSNVKKFTKLSIEYAQLTPVNQQFQTYLSHLKNLED--------AQ 66 Query: 75 LALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 L L EDD I +E N ++I +++ K +S+L + DS + +E+ AG GG E+ Sbjct: 67 LILFEDDMEIKTMAKEEILNTKKILSQLDLKLKKSILPKDPNDSRNIIIEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L ++Y+R++EK+K+ E + GE G K I G N Y LK E G HR+ Sbjct: 127 SIFSGDLFKIYSRYSEKQKWTIEIISSSIGEHGGFKEIIARISGINVYSKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ + P V++ EI I+ +D RIDT+RASGAGGQHVN TDSAV Sbjct: 187 QRVPTTESQGRIHTSACTVAIMPEVENIEEINININDVRIDTFRASGAGGQHVNKTDSAV 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG VV+CQ RSQHKNKAQA ++L +++ L+ Q++E+ + K IG G Sbjct: 247 RITHLPTGTVVECQDGRSQHKNKAQAMSVLASRI--LDAQQQEQQEQQSSTRKELIGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++IR+Y P + D R N+ +++++G+L +K + Sbjct: 305 RSQRIRTYNY-PQGRITDHRINLTLYKLTEIMEGNLSAIIKPLI 347 >gi|283471335|emb|CAQ50546.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus ST398] Length = 358 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 99/240 (41%), Positives = 147/240 (61%), Gaps = 8/240 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ A AGG E+ +A L+RMY+++AE + FKTE +E + + G K + + Sbjct: 106 DDKDVIVEIRAAAGGDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ V P V+D +EIEI D +IDT Sbjct: 166 SGNGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVED-VEIEIRNEDLKIDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY++++Q Sbjct: 225 YRSSGAGGQHVNTTDSAVRITHLPTGVIA-TSSEKSQIQNREKAMKVLKARLYDMKVQ-- 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE K+ +G G +IR+Y P V D R + +++G L++ + A Sbjct: 282 EEQQKYASQRKSAVGTGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDA 340 >gi|77463465|ref|YP_352969.1| peptide chain release factor 1 [Rhodobacter sphaeroides 2.4.1] gi|119361594|sp|Q3J2B6|RF1_RHOS4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|77387883|gb|ABA79068.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter sphaeroides 2.4.1] Length = 351 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 101/244 (41%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ G GG E+ +A LLRMY R+AE + ++ E L++ E GI+ AT Sbjct: 101 ADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATAR 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 ++G A+ LK E GVHR+ R+ ++ R HTS +++ V P ++ +++EI +D RID Sbjct: 161 VEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEE-VDLEIPAADIRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+PTG++V E+SQH+N+ A +LRA+LY+LE Q+ Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHRNREIAMQVLRARLYDLERQR 278 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K ++G G +IR+Y P + D R N+ + ++ GDL + + Sbjct: 279 LADARSA--DRKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVIS 335 Query: 349 ATLA 352 A A Sbjct: 336 ALTA 339 >gi|221639323|ref|YP_002525585.1| peptide chain release factor 1 [Rhodobacter sphaeroides KD131] gi|254790895|sp|B9KST8|RF1_RHOSK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|221160104|gb|ACM01084.1| Peptide chain release factor 1 [Rhodobacter sphaeroides KD131] Length = 351 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 101/244 (41%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ G GG E+ +A LLRMY R+AE + ++ E L++ E GI+ AT Sbjct: 101 ADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIREATAR 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 ++G A+ LK E GVHR+ R+ ++ R HTS +++ V P ++ +++EI +D RID Sbjct: 161 VEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEE-VDLEIPAADLRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+PTG++V E+SQH+N+ A +LRA+LY+LE Q+ Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHRNREIAMQVLRARLYDLERQR 278 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K ++G G +IR+Y P + D R N+ + ++ GDL + + Sbjct: 279 LADARSA--DRKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVIS 335 Query: 349 ATLA 352 A A Sbjct: 336 ALTA 339 >gi|29840418|ref|NP_829524.1| peptide chain release factor 1 [Chlamydophila caviae GPIC] gi|33301431|sp|Q822M2|RF1_CHLCV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|29834767|gb|AAP05402.1| peptide chain release factor 1 [Chlamydophila caviae GPIC] Length = 361 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 122/345 (35%), Positives = 189/345 (54%), Gaps = 19/345 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL----EL 75 ++RL + K +P +++N E L +E L S +K + D++ +L E Sbjct: 9 LKRLEEVEVKISNPEIFENPKEYSSLSKEHARL----SELKNVYDKVLGQEKILNDDKEA 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLSGEADSND--AYLEVHAGAGGTESQ 131 +E D ++ + +Q K EV+ YK E+LL +D +E+ AG GG E+ Sbjct: 65 LAQEKDPEMIAMLEEGIQLGKAEVDKLYKVLENLLVPPDPDDDLNVIMELRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + +RMY +A + +K E L + + G K + I G L+ E G HR+ Sbjct: 125 LFVGDCVRMYHLYASTKGWKYEVLSASESDIGGYKEYVMGISGAAVKRLLQYEAGTHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P +D E+ I E D +IDT+RASGAGGQHVN TDSAV Sbjct: 185 RVPETETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTGVVV CQ ERSQHKNKA+A +L+A++ + E+Q+R++ A+ S+ ++G G Sbjct: 245 RITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRQKEASAMRSA--QVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y + V D R + + V++GDLD A ++ Sbjct: 303 RSERIRTYNFSQNR-VTDHRIGLTLYNLDKVMEGDLDAITSALVS 346 >gi|166032746|ref|ZP_02235575.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC 27755] gi|166027103|gb|EDR45860.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC 27755] Length = 376 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 122/358 (34%), Positives = 195/358 (54%), Gaps = 32/358 (8%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + RL + ++ ++P + + + LM+E+ L + KE + C I Sbjct: 21 MFDKLEDLLIRLEEILSELQEPDVASDPNRFRKLMKEQSELTPIVEAYKEY--KACKQNI 78 Query: 72 --------------LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 + ELA EE L E+ ++ ++ E+ + L D + Sbjct: 79 EESLELLNEESDEDMRELAKEE-----LNESKARVEELEHEL---KILLLPKDPNDDKNV 130 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 +E+ AGAGG E+ +A + RMY +AE +++K E +E + G+K+ T +I G A Sbjct: 131 VVEIRAGAGGDEAALFAAEIYRMYLHYAESKRWKVELVECEEIGIGGMKNVTFMIDGQGA 190 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y +K E GVHR+ R+ +S R HTS ++ V P +D +++ I E D RID RASG Sbjct: 191 YSMMKYESGVHRVQRVPETESGGRIHTSTITVAVMPEAED-VDVHIDEKDIRIDVMRASG 249 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY+LE QK+ + Sbjct: 250 NGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDLECQKQHDAE- 308 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K++IG G +IR+Y P V D R + +++GD+ + + A +A Sbjct: 309 -AEARKSQIGTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIA 364 >gi|260438934|ref|ZP_05792750.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876] gi|292808585|gb|EFF67790.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876] Length = 358 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 148/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A L RMYT +AE R++K E + + G+K ++ Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAAELFRMYTHYAEARRWKVEVVNSDETGIGGMKEVEFMV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +S R HTS +S+ V P ++ +E++I E D RID Sbjct: 166 TGQGAYSVLKYESGVHRVQRVPETESGGRIHTSTASVAVMPEAEE-VEVQIDEKDIRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY++E QK Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQKA 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + ++ +++IG G +IR+Y P V D R + +L+GD+ + + A Sbjct: 285 HDAE--ADARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKILNGDIQEIIDA 341 Query: 350 TLA 352 +A Sbjct: 342 CIA 344 >gi|254515300|ref|ZP_05127361.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3] gi|219677543|gb|EED33908.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3] Length = 361 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 119/325 (36%), Positives = 180/325 (55%), Gaps = 23/325 (7%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ----E 87 DP + + + + L RE L+ + E Q L D + + L +DD + + E Sbjct: 25 DPGVIADQDQFRQLSREYSELETVVKCFGEYQALLGD-IEAAQSMLADDDADMREMAKAE 83 Query: 88 TSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 S+ +R LE E Q L DS++ +LE+ AG GG E+ ++ L RMYTR+AE Sbjct: 84 ISEGEARREALEAEL-QVLLLPRDPRDSHNVFLEIRAGTGGDEAAIFSGDLQRMYTRFAE 142 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ ++ E L GE G K I+G + Y +LK E G HR+ R+ +S R HTS Sbjct: 143 RQGWRLEVLSERPGEHGGYKEIISRIEGTDVYAYLKFESGAHRVQRVPETESQGRIHTSA 202 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 ++ + ++ IEI+++D R+DTYR+SGAGGQHVN TDSAVR+TH+PTG+VV+CQ E Sbjct: 203 CTVAILAEPEELEAIEINKADLRVDTYRSSGAGGQHVNKTDSAVRLTHLPTGIVVECQDE 262 Query: 267 RSQHKNKAQAWNMLRAKL--------YELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 RSQHKN+A+A ++L+AKL + ++R + G+ S +IR+Y Sbjct: 263 RSQHKNRARAMSLLQAKLTSSAEAAQASEQAEQRRNLVGTGDRSD-------RIRTYNF- 314 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDL 343 P V D R N+ +V+ GD+ Sbjct: 315 PQGRVTDHRINLTLYKLDEVMAGDM 339 >gi|307321056|ref|ZP_07600462.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83] gi|306893331|gb|EFN24111.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83] Length = 360 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 98/244 (40%), Positives = 151/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A + ++ E L +GE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGNLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +++ R HTS +++ V P ++ I+I++ D R+D Sbjct: 167 VSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEE-IDIDVRPEDIRVD 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITHIPTG+VV E+SQH+N+A+A +LR++LY++E Q+ Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHIPTGIVV-TSSEKSQHQNRAKAMQVLRSRLYDMERQR 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + ++++G G +IR+Y P + D R N+ +++G++DD + Sbjct: 285 AD--SERSADRRSQVGSGDRSERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDDVVD 341 Query: 349 ATLA 352 A LA Sbjct: 342 ALLA 345 >gi|171462958|ref|YP_001797071.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692839|sp|B1XSY0|RF1_POLNS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|171192496|gb|ACB43457.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 359 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 97/247 (39%), Positives = 145/247 (58%), Gaps = 16/247 (6%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D + +LE+ AG GG E +A LLRMYTR+AE++ +K E + + + G K L Sbjct: 105 ENDERNVFLEIRAGTGGDEGALFAGDLLRMYTRFAERQGWKVEVVSAAESDLGGYKEVVL 164 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G Y LK E G HR+ R+ ++ R HTS ++ V P D+ ++I+ ++ RI Sbjct: 165 RLVGQAVYSRLKFESGGHRVQRVPQTETQGRIHTSACTVAVMPETDELEAVKINPAELRI 224 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL------ 284 DT+RASGAGGQH+N TDSA+RITH+PTG VV+CQ +RSQH+N+ QA +L +++ Sbjct: 225 DTFRASGAGGQHINKTDSAIRITHLPTGTVVECQDDRSQHRNREQAMKVLVSRIMDARER 284 Query: 285 --YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 ++LE Q R+ + G+ S +IR+Y P + D R N+ ++DGD Sbjct: 285 EKHQLEAQTRKSLVGTGDRSD-------RIRTYNF-PQGRITDHRINLTLYKIDAMMDGD 336 Query: 343 LDDFMKA 349 +DD A Sbjct: 337 IDDLCNA 343 >gi|319761653|ref|YP_004125590.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC] gi|317116214|gb|ADU98702.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC] Length = 360 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A++E+ AG GG ES +A L RMYTR+A + +K E + ++ E G K L I Sbjct: 107 DERNAFVEIRAGTGGDESALFAGDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G +AYG L+ E G HR+ R+ ++ R HTS ++ V P D++ I ++ +D RIDT Sbjct: 167 EGDHAYGRLRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+ H+PTG+V +CQ RSQH NKA+A +L+A++ E E + Sbjct: 227 FRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHANKAKALQVLQARIQEKE--RS 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A K IG G +IR+Y P + D R N+ V++GDL + ++A Sbjct: 285 ERAAKEAALRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGEVLQA 343 >gi|62185243|ref|YP_220028.1| peptide chain release factor 1 [Chlamydophila abortus S26/3] gi|81312600|sp|Q5L5L4|RF1_CHLAB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|62148310|emb|CAH64077.1| peptide chain release factor 1 [Chlamydophila abortus S26/3] Length = 361 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 123/345 (35%), Positives = 187/345 (54%), Gaps = 19/345 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL----EL 75 ++RL + + +P ++ N E +L +E L S +K DR+ +L + Sbjct: 9 LKRLEEVEVEISNPEIFNNPKEYSLLSKEHARL----SELKNTYDRVMAQEKVLSDDKQA 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLSGEADSND--AYLEVHAGAGGTESQ 131 +E D ++ + +Q K EVE YK E+LL +D +E+ AG GG E+ Sbjct: 65 LAQEKDPEMIAMLEEGIQSGKAEVEKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + +RMY +A + +K E L + + G K + I G L+ E G HR+ Sbjct: 125 LFVGDCVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P +D E+ I E D +IDT+RASGAGGQHVN TDSAV Sbjct: 185 RVPETETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTGVVV CQ ERSQHKNKA+A +L+A++ + E+Q+R + A+ S+ ++G G Sbjct: 245 RITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEIQRRHKEASAMRSA--QVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y + V D R + S V++GDLD A ++ Sbjct: 303 RSERIRTYNFSQNR-VTDHRIGLTLYSLDKVMEGDLDTITSALVS 346 >gi|229014499|ref|ZP_04171617.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048] gi|229136148|ref|ZP_04264901.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196] gi|229170037|ref|ZP_04297729.1| Peptide chain release factor 1 [Bacillus cereus AH621] gi|228613462|gb|EEK70595.1| Peptide chain release factor 1 [Bacillus cereus AH621] gi|228647307|gb|EEL03389.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196] gi|228746849|gb|EEL96734.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048] Length = 358 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + G+ D AV+ R LN DP + + + + +E+ + + + +E +D + Sbjct: 1 MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ D +++E L+ E + +L D ND +EV Sbjct: 61 LRDAKAMLEDKLDADMRDMVKEEVSELE--GQEKTLSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEINIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|15618037|ref|NP_224321.1| peptide chain release factor 1 [Chlamydophila pneumoniae CWL029] gi|15835649|ref|NP_300173.1| peptide chain release factor 1 [Chlamydophila pneumoniae J138] gi|16752931|ref|NP_445202.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39] gi|33241449|ref|NP_876390.1| peptide chain release factor 1 [Chlamydophila pneumoniae TW-183] gi|6225941|sp|Q9Z968|RF1_CHLPN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|4376376|gb|AAD18266.1| Peptide Chain Releasing Factor [Chlamydophila pneumoniae CWL029] gi|7189573|gb|AAF38472.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39] gi|8978487|dbj|BAA98324.1| peptide chain releasing factor [Chlamydophila pneumoniae J138] gi|33235957|gb|AAP98047.1| translation releasing factor RF-1 [Chlamydophila pneumoniae TW-183] gi|269302994|gb|ACZ33094.1| peptide chain release factor 1 [Chlamydophila pneumoniae LPCoLN] Length = 357 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 124/343 (36%), Positives = 188/343 (54%), Gaps = 15/343 (4%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL---DNAISFIKEIQDRLCDNLILLELA 76 + RL+ + K +P ++ N E L +E +L NA I ++ L D+ LA Sbjct: 9 LNRLAEVEIKISNPEIFSNSKEYSALSKEHSYLLELKNAYDKILNLEKVLADDK--QALA 66 Query: 77 LEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQDW 133 +E+D + ++ E N +++LE K ESLL +D +E+ AG GG E+ + Sbjct: 67 IEKDPEMVVMLEEGINENKVELEKLNKILESLLVPPDPDDDLNVIMELRAGTGGEEAALF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 +RMY +A + +K E L + + G K + I G L+ E G HR+ R+ Sbjct: 127 VGDCVRMYHLYASSKGWKYEVLSASESDLKGYKEYVMGISGTGVKRLLQYEAGTHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ++ R HTS +I V P ++ E+ I+E D +IDT+RASGAGGQHVN TDSAVRI Sbjct: 187 PETETQGRVHTSAITIAVLPEPSEEDTELLINEKDLKIDTFRASGAGGQHVNVTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV CQ ERSQHKNK +A +L+A++ + E+QKR A+ S+ ++G G Sbjct: 247 THLPTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRHNEASAMRSA--QVGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y + V D R + + V++GDLD A ++ Sbjct: 305 ERIRTYNFSQNR-VTDHRIGLTLYNLDKVMEGDLDPITTAMVS 346 >gi|114330834|ref|YP_747056.1| peptide chain release factor 1 [Nitrosomonas eutropha C91] gi|122314234|sp|Q0AHU1|RF1_NITEC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114307848|gb|ABI59091.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosomonas eutropha C91] Length = 359 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 113/314 (35%), Positives = 176/314 (56%), Gaps = 8/314 (2%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L RER ++ F Q D +E++++ + D ++ ++E + Sbjct: 36 RKLSRERSEIEPVTRFYHTYQQVEQDLATAMEMSVDPQFRDFAEAEIDADKQKLADIETE 95 Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + LL + D + +LE+ AG GG ES +A L RMY+R+AE+ ++ E + + E Sbjct: 96 ILKQLLPRDPNDERNIFLEIRAGTGGDESALFAGDLFRMYSRYAEREGWQVEIVSQNPSE 155 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K I G AY LK E G HR+ R+ ++ R HTS ++ V P D+ + Sbjct: 156 VGGYKEIIARIIGHGAYSRLKFESGAHRVQRVPATETQGRVHTSTCTVAVLPEADEISGV 215 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 ++ +D RIDT+RASGAGGQH+N TDSAVRITH+PTG+V +CQ+ RSQHKNKAQA ++L Sbjct: 216 TLNPADLRIDTFRASGAGGQHINKTDSAVRITHLPTGIVAECQEGRSQHKNKAQAMSVLI 275 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +++ L+ Q R + A + K+ +G G +IR+Y P + D R N+ + Sbjct: 276 SRI--LDKQVRAQQAEQAAARKSLVGSGERSERIRTYNF-PQGRITDHRINLTLYKIEQI 332 Query: 339 LDGDLDDFMKATLA 352 +DG+LD+ +TLA Sbjct: 333 MDGELDELC-STLA 345 >gi|57505831|ref|ZP_00371756.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195] gi|57015861|gb|EAL52650.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195] Length = 355 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/244 (40%), Positives = 149/244 (61%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + L++ Y ++A+ R +K E + +G G K +L+ Sbjct: 104 DEKNIFLEIRAGTGGDEASLFVGDLVKAYAKYADLRGYKIEIVSSSEGSAGGFKELIMLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ RI +S R HTS ++ + P VDD IEI+I+ +D +ID Sbjct: 164 KGTGAYSRLKFESGTHRVQRIPQTESQGRIHTSAITVAIMPEVDD-IEIQINPNDLKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITHIP+G+VV Q +SQHKNK A +L+A+LY E+Q+ Sbjct: 223 MRSSGHGGQSVNTTDSAVRITHIPSGLVVVNQDGKSQHKNKESAMKILKARLY--EMQES 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMK 348 E +A E+ K+++G G +IR+Y P + D R N+ +++G L D+ ++ Sbjct: 281 ERLAKESEARKSQVGSGDRSERIRTYNF-PQNRISDHRINLTLYRLDAIMEGGLFDELIE 339 Query: 349 ATLA 352 +A Sbjct: 340 PLIA 343 >gi|119361587|sp|Q2K3T1|RF1_RHIEC RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 359 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/244 (41%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A ++ +K E L +GE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+A+A +LR++LY+ E Q+ Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P V D R N+ +++G++++ + Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALMA 345 >gi|312131222|ref|YP_003998562.1| bacterial peptide chain release factor 1 (brf-1) [Leadbetterella byssophila DSM 17132] gi|311907768|gb|ADQ18209.1| bacterial peptide chain release factor 1 (bRF-1) [Leadbetterella byssophila DSM 17132] Length = 358 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 115/302 (38%), Positives = 171/302 (56%), Gaps = 22/302 (7%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 HLD A + +D + LEL D L K E E + E L+ Sbjct: 58 HLDEAKEILATEKDEEMREMAKLEL--------------DELSPKKEEAEERLKELLIPK 103 Query: 111 EA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 + DS D+ LE+ AG GG E+ +A L RMY R+A ++ ++ ++ D G K Sbjct: 104 DPNDSKDSILEIRAGTGGDEASIFAGDLFRMYQRFAAQQGWQFTVMDFTDAPSGGYKEIV 163 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + +KG + YG LK E GVHR+ R+ +S R HTS +++ V P D+ ++++I+ +D R Sbjct: 164 VSVKGEDVYGKLKYESGVHRVQRVPATESQGRIHTSAATVAVLPEADE-VDVQINMNDIR 222 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 DT+ +SGAGGQ VNTT SAVR+THIPTG+VVQCQ ERSQ KN +A +LR++LYE+EL Sbjct: 223 KDTFCSSGAGGQSVNTTYSAVRVTHIPTGLVVQCQDERSQIKNFDKALTVLRSRLYEIEL 282 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 K+ E +I K+ +G G +IR+Y P V D R + V++G++ +F Sbjct: 283 AKQNE--SIAGERKSLVGSGDRSDKIRTYNY-PQGRVTDHRIGFTVYNLPHVMEGNIGEF 339 Query: 347 MK 348 ++ Sbjct: 340 IE 341 >gi|307296979|ref|ZP_07576795.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1] gi|306877505|gb|EFN08733.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1] Length = 363 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 104/245 (42%), Positives = 153/245 (62%), Gaps = 8/245 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ AG GG E+ +A L RMY R+A+ + +K E + + E G K Sbjct: 109 ADARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVAS 168 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +S R HTS +++ V P ++ ++++I++SD +ID Sbjct: 169 VTGVGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPEE-VDVQIADSDLKID 227 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YRASGAGGQHVNTTDSAVRITH+P+G+VV Q ERSQHKNKA+A +LRA++YE+E ++ Sbjct: 228 IYRASGAGGQHVNTTDSAVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEVE-RE 286 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 R + G + K +G G +IR+Y P V D R N+ ++L+G L + + Sbjct: 287 RAQSEQAG-ARKAMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVI 344 Query: 348 KATLA 352 A +A Sbjct: 345 DALVA 349 >gi|323496829|ref|ZP_08101866.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326] gi|323318088|gb|EGA71062.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326] Length = 362 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 114/330 (34%), Positives = 184/330 (55%), Gaps = 17/330 (5%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI------- 84 DP + + + + L +E L+ + Q + ++L+ E EDD + Sbjct: 25 DPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQEDLVAAEEMANEDDEEMREMAQEE 83 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 ++E D ++R+ E+ Q L D + +LE+ AGAGG E+ +A L RMY+++ Sbjct: 84 IKEAKDAIERLSDEL---QILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKF 140 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AEK+ ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HT Sbjct: 141 AEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHT 200 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ Sbjct: 201 SACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQ 260 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321 ERSQHKNKA+A +L A++ ++ ++ + A ++ + +G G +IR+Y P Sbjct: 261 DERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRSDRIRTYNY-PQG 317 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V D R N+ ++V++GD+ + + Sbjct: 318 RVSDHRINLTLYRLNEVMEGDVSSLIDPVI 347 >gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51867] gi|227542608|ref|ZP_03972657.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092058|gb|EEI27370.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51867] gi|227181806|gb|EEI62778.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51866] Length = 358 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 121/340 (35%), Positives = 184/340 (54%), Gaps = 11/340 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ + L + DP + + + L ++ +++ D ELA Sbjct: 9 DDILAEYQGLEAQMADPEFANDPDNVRKAGKRYSQLQPIVNLNTQLEQARADLADAKELA 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135 E+ S + L+ +E+E K + L + D +D +E+ AGAGG E+ +A Sbjct: 69 YED---SAFTAEVERLEPKVVELEEKLADMLAPRDPHDPDDMVMEIKAGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQGVHRL 190 L+RMY R+AEK F TE L+ + + G+K TL I+ N A+ K E GVHR+ Sbjct: 126 ELVRMYQRYAEKHGFITEVLDESESDLGGVKDMTLSIRSKNPSQDGAWSVFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +SN R TS + + VYP D+ ++EI E D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRIPVTESNGRIQTSAAGVLVYPEPDEVGQVEIDEKDIRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 R+TH+PTG++V CQ+ERSQ +NKA+A +L+A+L ++E +K E A G ++ + Sbjct: 246 RLTHLPTGIIVTCQKERSQIQNKARAMQVLQARLQQIEEEKAEAEAAEGRHAQVRTMDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R + + VLDGD+D + A Sbjct: 306 ERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMDALLMA 344 >gi|330823524|ref|YP_004386827.1| peptide chain release factor 1 [Alicycliphilus denitrificans K601] gi|329308896|gb|AEB83311.1| Peptide chain release factor 1 [Alicycliphilus denitrificans K601] Length = 371 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A++E+ AG GG ES +A L RMYTR+A + +K E + ++ E G K L I Sbjct: 118 DERNAFVEIRAGTGGDESALFAGDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRI 177 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G +AYG L+ E G HR+ R+ ++ R HTS ++ V P D++ I ++ +D RIDT Sbjct: 178 EGDHAYGRLRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDT 237 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+ H+PTG+V +CQ RSQH NKA+A +L+A++ E E + Sbjct: 238 FRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHANKAKALQVLQARIQEKE--RS 295 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A K IG G +IR+Y P + D R N+ V++GDL + ++A Sbjct: 296 ERAAKEAALRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGEVLQA 354 >gi|229064980|ref|ZP_04200278.1| Peptide chain release factor 1 [Bacillus cereus AH603] gi|228716281|gb|EEL67993.1| Peptide chain release factor 1 [Bacillus cereus AH603] Length = 358 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + G+ D AV+ R LN DP + + + + +E+ + + + +E +D + Sbjct: 1 MNGVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ D +++E L+ E + +L D ND +EV Sbjct: 61 LRDAKAMLEDKLDADMRDMVKEEVSELE--GQEKTLSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEINIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|330723258|gb|AEC45628.1| peptide chain release factor 1 [Mycoplasma hyorhinis MCLD] Length = 383 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 119/346 (34%), Positives = 180/346 (52%), Gaps = 27/346 (7%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++ L+ + DP + N+ E + +E +++ + K L ++++ ED Sbjct: 36 EKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNY---------LKQVSIIED 86 Query: 81 DCSILQETS---DNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGT 128 +LQE NL + ++ + K+ E L E D + +E+ AGG Sbjct: 87 SKKLLQEKDVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIRGAAGGD 146 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ + L +MY +WAE +K+ + L G L+ G Y LK E GVH Sbjct: 147 EANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLKFESGVH 206 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ RI ++ R HTS +++ + P VDD I+++I D RIDTYR+SGAGGQ VNTTDS Sbjct: 207 RVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQSVNTTDS 266 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTG+V Q RSQ NK A +L++K+Y LE++K++ I G+ K Sbjct: 267 AVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIE--GQFRKLAGSG 324 Query: 309 GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R +IR+Y P V D R + TS +V+ G+LD + A LA Sbjct: 325 ARSEKIRTYNY-PQDRVTDHRISFS-TSLKNVIVGNLDPIIDALLA 368 >gi|255262532|ref|ZP_05341874.1| peptide chain release factor 1 [Thalassiobium sp. R2A62] gi|255104867|gb|EET47541.1| peptide chain release factor 1 [Thalassiobium sp. R2A62] Length = 351 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 122/314 (38%), Positives = 171/314 (54%), Gaps = 17/314 (5%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYK-QF 104 +E L I I E Q L +L EL + + D L E + R +L E+E Q Sbjct: 35 KEYSDLRPVIDVITEYQT-LEADLAEAELMMSDPDMKELAEEELPMLRARLPEIEQNLQI 93 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 L AD+ A +E+ G GG E+ +A LLRMY R+AE R + E +E E G Sbjct: 94 ALLPKDAADARPAMIEIRPGTGGDEAALFAGDLLRMYQRYAEARGWTFEIIEEQSTELGG 153 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IK T +KG + +K E GVHR+ R+ +S R HTS +++ V P +D ++I+I Sbjct: 154 IKEVTAHVKGEGVFARMKYESGVHRVQRVPTTESGGRIHTSAATVAVLPEAED-VDIQID 212 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D RIDT RASG+GGQHVNTTDSAVRITHIP+G+VV E+SQH+N+ A L+ +L Sbjct: 213 PGDLRIDTMRASGSGGQHVNTTDSAVRITHIPSGIVV-VSSEKSQHRNREIAMLTLKTRL 271 Query: 285 YELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 Y+ E Q+ + A IG ++E +IR+Y P + D R N+ V Sbjct: 272 YDAERQRVDGERSADRAAQIGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDQV 325 Query: 339 LDGDLDDFMKATLA 352 + GDLD+ ++A A Sbjct: 326 MQGDLDETIEALTA 339 >gi|296134391|ref|YP_003641638.1| peptide chain release factor 1 [Thermincola sp. JR] gi|296032969|gb|ADG83737.1| peptide chain release factor 1 [Thermincola potens JR] Length = 355 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 149/242 (61%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +A L RMY+R+AE + +KTE L + + G K LI Sbjct: 106 DEKNVIMEIRGGAGGEEAALFAGDLFRMYSRYAEAKGWKTEILSSNPTDIGGFKEIIFLI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S+ R HTS ++ V P ++ ++++I +D RID Sbjct: 166 EGQGAYSRLKFESGVHRVQRVPTTESSGRIHTSTVTVAVLPEAEE-VDVDIDPNDLRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+THIPTG+VV CQ E+SQHKNK +A +LRA+L L+ + Sbjct: 225 FCSSGPGGQSVNTTQSAVRVTHIPTGIVVSCQDEKSQHKNKEKALRVLRARL--LDKAQE 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + + K+++G G +IR+Y P V D R + VL+GDLD+ ++A Sbjct: 283 EQRNQLASTRKSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHKLDMVLEGDLDEIIEA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|260433480|ref|ZP_05787451.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis ITI-1157] gi|260417308|gb|EEX10567.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis ITI-1157] Length = 351 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 106/256 (41%), Positives = 150/256 (58%), Gaps = 14/256 (5%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L AD+ A LE+ G GG E+ +A LLRMY R+AE R ++ E +E E Sbjct: 92 QLALLPKDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWQFEIIEEQHTEL 151 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 GIK IKG N + LK E GVHR+ R+ +S R HTS +++ V P +D ++I+ Sbjct: 152 GGIKEVVAHIKGDNVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIQ 210 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+ Sbjct: 211 IDPNDIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHRNREIAMQVLKT 269 Query: 283 KLYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +LY+LE Q+ + + +G ++E +IR+Y P + D R N+ Sbjct: 270 RLYDLERQRIDSERSADRASQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLD 323 Query: 337 DVLDGDLDDFMKATLA 352 ++ GDLD+ + A A Sbjct: 324 QIMQGDLDEVIDALTA 339 >gi|323492377|ref|ZP_08097530.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546] gi|323313424|gb|EGA66535.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546] Length = 362 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 115/319 (36%), Positives = 181/319 (56%), Gaps = 11/319 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + N + + L +E L+ + Q + ++L+ E EDD + + + Sbjct: 25 DPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQ-QAQEDLVAAEEMANEDDEEMREMAQEE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+++AEK Sbjct: 84 IKEAKEAIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HTS Sbjct: 144 KGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ER Sbjct: 204 TVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQDER 263 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A +L A++ ++ ++ + A ++ + +G G +IR+Y P V Sbjct: 264 SQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRSDRIRTYNY-PQGRVS 320 Query: 325 DLRTNIEKTSPSDVLDGDL 343 D R N+ ++V++GD+ Sbjct: 321 DHRINLTIYRLNEVMEGDV 339 >gi|110680314|ref|YP_683321.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114] gi|119361597|sp|Q164F8|RF1_ROSDO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|109456430|gb|ABG32635.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114] Length = 351 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 104/248 (41%), Positives = 150/248 (60%), Gaps = 14/248 (5%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 +AD+ A LE+ G GG E+ +A L RMY R+AE + +K + +E+ + E GIK Sbjct: 100 KADAKPAMLEIRPGTGGDEAALFAGDLFRMYQRYAETQGWKVDLIELQETELGGIKEVVA 159 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG + + LK E GVHR+ R+ +S R HTS +++ V P +D ++I I +D RI Sbjct: 160 HIKGADVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAED-VDIHIDANDLRI 218 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+A+LY+LE Sbjct: 219 DTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKARLYDLERS 277 Query: 291 KREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + ++ A +G ++E +IR+Y P + D R N+ VL GDLD Sbjct: 278 RVDDERSADRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYRLDAVLQGDLD 331 Query: 345 DFMKATLA 352 + + A A Sbjct: 332 EIIDALTA 339 >gi|15966364|ref|NP_386717.1| peptide chain release factor 1 [Sinorhizobium meliloti 1021] gi|307313049|ref|ZP_07592676.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C] gi|20139338|sp|Q92MK5|RF1_RHIME RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|15075635|emb|CAC47190.1| Probable peptide chain release factor 1 (RF-1) protein [Sinorhizobium meliloti 1021] gi|306899368|gb|EFN30002.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C] Length = 360 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 98/244 (40%), Positives = 151/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A + ++ E L +GE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +++ R HTS +++ V P ++ I+I++ D R+D Sbjct: 167 VSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEE-IDIDVRPEDIRVD 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITHIPTG+VV E+SQH+N+A+A +LR++LY++E Q+ Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHIPTGIVV-TSSEKSQHQNRAKAMQVLRSRLYDMERQR 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + ++++G G +IR+Y P + D R N+ +++G++DD + Sbjct: 285 AD--SERSADRRSQVGSGDRSERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDDVVD 341 Query: 349 ATLA 352 A LA Sbjct: 342 ALLA 345 >gi|291561383|emb|CBL40182.1| bacterial peptide chain release factor 1 (bRF-1) [butyrate-producing bacterium SS3/4] Length = 357 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 123/353 (34%), Positives = 202/353 (57%), Gaps = 22/353 (6%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68 +FD D+ ++ L + +P + ++ + + LM+E+ L +A K+ + + D Sbjct: 1 MFDRLDDMLRHYEELMLELNNPSVAEDQRKFRKLMKEQADLAPIVDAYKQYKQAKQDVED 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAG 124 +L LL+ +E+ + +E +D +RI+ E +Q +L D ND +E+ AG Sbjct: 61 SLALLDEESDEEMKELAKEELADAKKRIE---ELEQELKILLLPKDPNDEKNVIVEIRAG 117 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A+ L RMY +AE + +KTE + + + G+K +I G AY LK E Sbjct: 118 AGGDEAALFASELYRMYVHYAESQHWKTEMINVSESGIGGMKEVEFMITGHGAYSKLKYE 177 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS +++ + P ++ ++ I + D RID RASG GGQ VN Sbjct: 178 SGVHRVQRVPETESGGRIHTSTATVAIMPEAEE-FDVVIDDKDIRIDVMRASGNGGQCVN 236 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESS 302 TTDSAVR+THIPTG+V+ Q E+SQ +NK +A+ +LR+KLY++EL++R EE A Sbjct: 237 TTDSAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELERRQNEEAA----ER 292 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +++IG G +IR+Y P V D R + ++DGD+ + + + +A Sbjct: 293 RSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDAIMDGDIQELIDSLIA 344 >gi|157165147|ref|YP_001465968.1| peptide chain release factor 1 [Campylobacter concisus 13826] gi|166223539|sp|A7ZB10|RF1_CAMC1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|112801757|gb|EAT99101.1| peptide chain release factor 1 [Campylobacter concisus 13826] Length = 355 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 181/320 (56%), Gaps = 18/320 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76 + R ++T DP++ ++ + L +E+ ++ A + +I + + +N LLE A Sbjct: 10 LDRYDEISTLLSDPNIANDIEKMTKLSKEQSSIEPVATAATKYLQILNDIEENKALLEDA 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDW 133 E + + + S + R KLE E K +L D ND +LE+ AG GG E+ + Sbjct: 70 -ELGELAKEELKSLEISREKLEEEIK----ILLLPKDPNDDKNIFLEIRAGTGGDEAALF 124 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L Y R+AE R +K E + +G G K +LIKG AY LK E G HR+ R+ Sbjct: 125 AGDLFNAYIRYAELRGYKFEIVSQSEGNTGGFKEIIVLIKGKGAYSRLKFEGGTHRVQRV 184 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS ++ + P V+DS EIEI+ +D R+D R+SG GGQ VNTTDSAVRIT Sbjct: 185 PETESQGRVHTSAVTVAIMPEVEDS-EIEINPNDIRVDVMRSSGHGGQSVNTTDSAVRIT 243 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--- 310 HIPTG+VV Q +SQHKNK A +L+A+LY E+Q++E +A K+++G G Sbjct: 244 HIPTGLVVTNQDGKSQHKNKEAAMKVLKARLY--EMQEQERLAKETSERKSQVGTGDRSG 301 Query: 311 QIRSYVLQPYQMVKDLRTNI 330 +IR+Y P + D R N+ Sbjct: 302 RIRTYNY-PQNRISDHRINL 320 >gi|86359340|ref|YP_471232.1| peptide chain release factor 1 [Rhizobium etli CFN 42] gi|86283442|gb|ABC92505.1| peptide chain release factor 1 protein [Rhizobium etli CFN 42] Length = 351 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/244 (41%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A ++ +K E L +GE G K Sbjct: 99 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIAT 158 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 159 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 217 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+A+A +LR++LY+ E Q+ Sbjct: 218 TMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 276 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P V D R N+ +++G++++ + Sbjct: 277 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 333 Query: 349 ATLA 352 A +A Sbjct: 334 ALMA 337 >gi|323486285|ref|ZP_08091611.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum WAL-14163] gi|323693924|ref|ZP_08108111.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673] gi|323400395|gb|EGA92767.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum WAL-14163] gi|323502021|gb|EGB17896.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673] Length = 357 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 126/355 (35%), Positives = 199/355 (56%), Gaps = 26/355 (7%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLC 67 +FD D+ + R L + P + + + LM+E+ L + KE QD + Sbjct: 1 MFDRLDDLLIRYEELLEELNSPDVAMDQNRFRKLMKEQADLTPLVDAYKEYKKANQD-VE 59 Query: 68 DNLILLELALEEDDCSIL----QETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLE 120 D+L LLE EE D + +E +D +RI+ E +Q +L D ND +E Sbjct: 60 DSLALLE---EESDEEMRDMAKEELADAKKRIE---EMEQQLKILLLPKDPNDDKNVMVE 113 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGG E+ +A+ L RMY +AE ++KTE + +++ G K ++ G AY Sbjct: 114 IRAGAGGDEAALFASELYRMYVHFAESNRWKTELVSVNENGIGGFKEVVFMVTGQGAYSK 173 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 +K E GVHR+ R+ +S R HTS +S+ V P ++ ++ I + D RID RASG GG Sbjct: 174 MKYESGVHRVQRVPETESGGRIHTSTASVAVMPEAEE-FDVVIDDKDIRIDVMRASGNGG 232 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+TH+PTG+V+ Q E+SQ +NK +A+ +LR+KLY++EL+KR+ E Sbjct: 233 QCVNTTDSAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQN--QEAE 290 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +++IG G +IR+Y P V + R + V++G+L++ + + +A Sbjct: 291 ERRSQIGTGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDSVMNGELNELIDSLIA 344 >gi|313903650|ref|ZP_07837040.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter subterraneus DSM 13965] gi|313466203|gb|EFR61727.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter subterraneus DSM 13965] Length = 389 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 102/266 (38%), Positives = 157/266 (59%), Gaps = 13/266 (4%) Query: 96 KLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +LE E + E L G D D +E+ AG GG E+ +A L RMY R+AE++ Sbjct: 116 RLEGERQALERALRGLLLPRDPRDQRDVIMEIRAGTGGEEAALFAGDLFRMYQRYAERQG 175 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++TE + + + G K + G A+ LK E GVHR+ R+ ++ R HTS +++ Sbjct: 176 WRTEIMAATESDLGGFKEIIFAVSGRGAFSRLKHESGVHRVQRVPVTEAGGRIHTSTATV 235 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ +E++I D IDT+ ASG GGQHVN T+SAVRITH PTG+VV CQ ERSQ Sbjct: 236 AVLPEAEE-VEVQIDPDDLEIDTFAASGPGGQHVNKTESAVRITHKPTGIVVTCQDERSQ 294 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326 HKN+A+A +LRA+L + ++++E + + ++++G G +IR+Y + + V D Sbjct: 295 HKNRARAMKILRARLLDYYTRRQQE--ELSQQRRSQVGTGERSEKIRTYNFRENR-VTDH 351 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352 R + +V+DGDLD+ + A A Sbjct: 352 RIGLTLYRLQEVMDGDLDELLDALAA 377 >gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46] gi|213952657|gb|EEB64039.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46] Length = 357 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 107/246 (43%), Positives = 149/246 (60%), Gaps = 13/246 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS+D +E+ +GAGG E+ +A L RMY R+AEK F TE L + + + G+K T+ I Sbjct: 103 DSDDIVMELKSGAGGEEAALFAGELARMYQRYAEKHGFTTEILGLSESDLGGVKDMTMSI 162 Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K P+ A+ K E GVHR+ R+ +S R TS + + VYP D+ +I+I E D Sbjct: 163 RAKTPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDIQIDEKD 222 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R+D YR+SG GGQ VNTTDSAVR+TH+PTG+VV CQ+ERSQ +NKA+A +L A+L ++ Sbjct: 223 LRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGLVVTCQKERSQIQNKARAMQVLAARLQQM 282 Query: 288 ELQKREEIANIG----ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 K EEIA +S + +IR+Y P V D R + + VL GD+ Sbjct: 283 ---KEEEIAEAASDQRKSQVRNMDRSERIRTYNF-PENRVSDHRIGYKAHNLDSVLGGDM 338 Query: 344 DDFMKA 349 DD +KA Sbjct: 339 DDLLKA 344 >gi|154174699|ref|YP_001407404.1| peptide chain release factor 1 [Campylobacter curvus 525.92] gi|166223540|sp|A7GW12|RF1_CAMC5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|112802322|gb|EAT99666.1| peptide chain release factor 1 [Campylobacter curvus 525.92] Length = 355 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 125/327 (38%), Positives = 178/327 (54%), Gaps = 26/327 (7%) Query: 32 DPHLWQNVIEAKMLMRERQHLD---NAIS-FIKEIQD-----RLCDNLILLELALEE-DD 81 DP++ ++ + L +E+ ++ NA S +++ + D L D+ L ELA EE Sbjct: 22 DPNIINDIEKMTKLSKEQSSIEPIKNAASQYLQTLDDIEENKALLDDAELGELAREELKS 81 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 I +E +N +I L L D + +LE+ AG GG E+ + L Y Sbjct: 82 AQIRKEELENEIKILL---------LPKDPNDDKNIFLEIRAGTGGDEAALFVGDLFNAY 132 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+A+ R +K E + +G G K LLIKG AY LK E G HR+ R+ +S R Sbjct: 133 IRYADLRGYKFEIVSQSEGSAGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPETESQGR 192 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS ++ + P V+DS EIEI+ +D RID R+SG GGQ VNTTDSAVRITHIPTG+VV Sbjct: 193 VHTSAVTVAIMPEVEDS-EIEINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGLVV 251 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQ 318 Q +SQHKNK A +L+A+LY E+Q+ E IA K+++G G +IR+Y Sbjct: 252 TNQDGKSQHKNKEAAMKVLKARLY--EMQEAERIAKETSERKSQVGTGDRSGRIRTYNF- 308 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDD 345 P + D R N+ ++ G L D Sbjct: 309 PQNRISDHRINLTLYRLDAIMAGGLFD 335 >gi|297183691|gb|ADI19816.1| protein chain release factor a [uncultured alpha proteobacterium EB000_37G09] Length = 357 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 107/243 (44%), Positives = 146/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A LEV AG GG E+ +A L MY R A + +K E +EI + G K AT I Sbjct: 108 DSRNAILEVRAGTGGDEAALFAADLFGMYQRTASRYGWKFEVMEISETGIGGYKEATANI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + + LK E GVHR+ R+ ++ R HTS +++ V P D ++IE+SESD R+D Sbjct: 168 SGQDVFARLKFESGVHRVQRVPETETGGRIHTSAATVAVLPEAQD-VDIEVSESDLRVDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVRITH+PTG+VV Q E+SQHKN+A+A +LRA++Y+ E ++ Sbjct: 227 FRASGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQHKNRAKAMKILRARIYDAERARQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A S K ++G G +IR+Y P V D R N VL G+ D + Sbjct: 287 Q--AERAASRKGQVGSGDRSERIRTYNF-PQGRVTDHRINFTLYKLDKVLAGEAIDEVID 343 Query: 350 TLA 352 LA Sbjct: 344 ALA 346 >gi|304438485|ref|ZP_07398425.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368568|gb|EFM22253.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 354 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/238 (41%), Positives = 144/238 (60%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG E+ +A L RMY R+AE++ ++TE L + E G K T L+ Sbjct: 105 DDKNVIVEIRGGVGGEEAALFAASLFRMYARYAERQGWRTEVLSSNPTEIGGFKEITFLV 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ RI +S R HTS ++ V P ++ +E+ I +D RIDT Sbjct: 165 SGAGAYSKLKYESGTHRVQRIPVTESGGRIHTSAVTVAVLPEAEE-VEVTIDPNDLRIDT 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQ+VN T++A+RITHIPTG+VVQCQ E+SQ KN+ +A +LRA+LY+ Q Sbjct: 224 YCASGAGGQYVNRTETAIRITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYDRAQQ-- 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E+ + ++++G G +IR+Y P V D R + V+DG+LD+ + Sbjct: 282 EQADAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDAVMDGELDELL 338 >gi|300115109|ref|YP_003761684.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113] gi|299541046|gb|ADJ29363.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113] Length = 360 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 108/262 (41%), Positives = 158/262 (60%), Gaps = 8/262 (3%) Query: 96 KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 KLE ++ +LL + D + +LE+ AG GG E+ +A+ LLRMY R+ E+R ++TE Sbjct: 90 KLERLDRELHTLLLPTDPNDKRNIFLEIRAGTGGDEAALFASDLLRMYLRYVEQRGWRTE 149 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + GE G K + I G AY LK E G HR+ R+ +S R HTS ++ + P Sbjct: 150 IMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGHRVQRVPQTESQGRIHTSACTVAIMP 209 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 ++ EI+I+ +D R+DT+RASGAGGQHVN TDSA+RITH+P+G+VV+CQ ERSQHKN+ Sbjct: 210 EAEEIDEIDINPADLRVDTFRASGAGGQHVNKTDSAIRITHLPSGIVVECQDERSQHKNR 269 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 A+A ++LR KL E +K + ++ IG G +IR+Y P V D R N+ Sbjct: 270 ARAMSLLRTKLKLEEEEKLVAEETA--TRRSLIGSGDRSERIRTYNF-PQGRVTDHRINL 326 Query: 331 EKTSPSDVLDGDLDDFMKATLA 352 ++L G+LD + +A Sbjct: 327 TLYKLDEILQGNLDAIIDLLVA 348 >gi|226323866|ref|ZP_03799384.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758] gi|225207415|gb|EEG89769.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758] Length = 358 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 98/243 (40%), Positives = 149/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A + RMY +A+ R++KTE + +++ G K +I Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKEVVFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E GVHR+ R+ +S R HTS ++ V P ++ +++ I E D RID Sbjct: 166 TGQGAYSRMKYESGVHRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIDEKDIRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K+ Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQ 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ +++IG G +IR+Y P V D R + +++GDLD+ + + Sbjct: 285 HSAE--AEARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDLDEVIDS 341 Query: 350 TLA 352 +A Sbjct: 342 LIA 344 >gi|304373116|ref|YP_003856325.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1] gi|304309307|gb|ADM21787.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1] Length = 361 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 119/346 (34%), Positives = 180/346 (52%), Gaps = 27/346 (7%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++ L+ + DP + N+ E + +E +++ + K L ++++ ED Sbjct: 14 EKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNY---------LKQVSIIED 64 Query: 81 DCSILQETS---DNLQRIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGT 128 +LQE NL + ++ + K+ E L E D + +E+ AGG Sbjct: 65 SKKLLQEKDVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIRGAAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ + L +MY +WAE +K+ + L G L+ G Y LK E GVH Sbjct: 125 EANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLKFESGVH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ RI ++ R HTS +++ + P VDD I+++I D RIDTYR+SGAGGQ VNTTDS Sbjct: 185 RVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQSVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTG+V Q RSQ NK A +L++K+Y LE++K++ I G+ K Sbjct: 245 AVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIE--GQFRKLAGSG 302 Query: 309 GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R +IR+Y P V D R + TS +V+ G+LD + A LA Sbjct: 303 ARSEKIRTYNY-PQDRVTDHRISFS-TSLKNVIVGNLDPIIDALLA 346 >gi|329943005|ref|ZP_08291779.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10] gi|332287587|ref|YP_004422488.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC] gi|313848161|emb|CBY17162.1| peptide chain release factor 1 [Chlamydophila psittaci RD1] gi|325506915|gb|ADZ18553.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC] gi|328814552|gb|EGF84542.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10] gi|328914838|gb|AEB55671.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC] Length = 361 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 122/345 (35%), Positives = 187/345 (54%), Gaps = 19/345 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL----EL 75 ++RL + K +P ++ N E +L +E L S +K DR+ +L + Sbjct: 9 LKRLEEVEAKISNPEIFDNPKEYSLLSKEHARL----SELKNTYDRVVAQEKILSDDKQA 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLSGEADSND--AYLEVHAGAGGTESQ 131 +E D ++ + +Q K EV+ YK E+LL +D +E+ AG GG E+ Sbjct: 65 LAQEKDPEMIAMLEEGIQSGKAEVDKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + +RMY +A + +K E L + + G K + I G L+ E G HR+ Sbjct: 125 LFVGDCVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P ++ E+ I E D +IDT+RASGAGGQHVN TDSAV Sbjct: 185 RVPETETQGRVHTSAITVAVLPEPAENDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTGVVV CQ ERSQHKNKA+A +L+A++ + E+Q+R + A+ S+ ++G G Sbjct: 245 RITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRSA--QVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y + V D R + S V++GDLD A ++ Sbjct: 303 RSERIRTYNFSQNR-VTDHRIGLTLYSLDKVMEGDLDTITSALVS 346 >gi|294055591|ref|YP_003549249.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM 45221] gi|293614924|gb|ADE55079.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM 45221] Length = 362 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 118/336 (35%), Positives = 187/336 (55%), Gaps = 13/336 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDN-LILLELAL 77 +L+ L+ + DP+ + + A + RE Q + I + Q ++ +N ++ + ++ Sbjct: 13 KLADLDAQMADPNFYSDQRRAAEVSREHQRVSGLIERFEAFHSAQTQIVENEAMMADSSV 72 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136 EE+ + E + L+ +E +++ +A DS ++ +E+ GAGG E+ +A Sbjct: 73 EEELREMAAEEVEELKGQIETLEKDVLRAMVPPDATDSRNSVMEIRGGAGGDEANIFAGD 132 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMYTR+AE + ++ E + E G + I G +AY LK E GVHR+ R+ Sbjct: 133 LYRMYTRYAEAKGWRVEVMSTSPAETGGYREIIFNISGEDAYKHLKFESGVHRVQRVPVT 192 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P ++ ++IEI+ D I T RASGAGGQHVNTTDSAV + H P Sbjct: 193 ETQGRIHTSTATVAVLPEAEE-VDIEINPQDLEISTMRASGAGGQHVNTTDSAVMMVHKP 251 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TGV V C ERSQ KN+A+A ++R++L L+ + EE A K +IG G +IR Sbjct: 252 TGVTVYCADERSQIKNRAKALTVMRSRL--LQAKVDEENAKYAAERKGQIGTGDRSERIR 309 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +Y P + D R + + PS V+DG LDD + A Sbjct: 310 TYNY-PQGRLTDHRIGMNLSLPS-VIDGALDDLIDA 343 >gi|294010049|ref|YP_003543509.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S] gi|292673379|dbj|BAI94897.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S] Length = 363 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 104/245 (42%), Positives = 152/245 (62%), Gaps = 8/245 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ AG GG E+ +A L RMY R+A+ + +K E + + E G K Sbjct: 109 ADARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVAS 168 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +S R HTS +++ V P ++ ++++I++SD +ID Sbjct: 169 VTGTGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPEE-VDVQIADSDLKID 227 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YRASGAGGQHVNTTDSAVRITH+P+G+VV Q ERSQHKNKA+A +LRA++YE E ++ Sbjct: 228 IYRASGAGGQHVNTTDSAVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEAE-RE 286 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 R + G + K +G G +IR+Y P V D R N+ ++L+G L + + Sbjct: 287 RAQSEQAG-ARKAMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVI 344 Query: 348 KATLA 352 A +A Sbjct: 345 DALVA 349 >gi|150388171|ref|YP_001318220.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF] gi|166977357|sp|A6TK43|RF1_ALKMQ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|149948033|gb|ABR46561.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF] Length = 357 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 122/357 (34%), Positives = 190/357 (53%), Gaps = 40/357 (11%) Query: 22 RLSFLNTKTED-------PHL------WQNVIEAK-------MLMRERQHLDNAISFIKE 61 +L+FL K ED P + WQ +I+ M RE + A+ KE Sbjct: 4 KLAFLQEKYEDLGEKISDPEIINDQVQWQKLIKEHSEIEPIVMKYREYKTTQQALGETKE 63 Query: 62 IQDRLCDNLILLELA---LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 I + L E+A +EE + SI+ E + L+ + L + D + Sbjct: 64 IMHDKATDAELKEMAKMEVEELEESIV-EMEEQLKVMLLPTDPN----------DDKNVI 112 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ GAGG E+ +A +L RMYTR+AE+ +K E + +++ G K +IKG AY Sbjct: 113 VEIRGGAGGDEAGLFAAVLFRMYTRYAERSGWKVEMMSLNESGVGGYKEVIFMIKGKGAY 172 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E G HR+ RI +S R HTS +++ + P +D E+ I ++ RID +R+SG Sbjct: 173 SQLKYESGAHRVQRIPTTESGGRIHTSTATVVIMPEAEDVGEVNIDTNELRIDVFRSSGN 232 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV CQ +SQ KNK +A +L+++L + +Q E+ A I Sbjct: 233 GGQSVNTTDSAVRITHLPTGLVVSCQDGKSQLKNKEKAMKVLKSRLLDQMIQ--EQDAEI 290 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + ++++G G +IR+Y P V D R N+ LDG++++ + + + Sbjct: 291 SQDRRSKVGTGDRSERIRTYNF-PQGRVTDHRINVTVYKLDAFLDGEINEMIDSLIT 346 >gi|258513428|ref|YP_003189650.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM 771] gi|257777133|gb|ACV61027.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM 771] Length = 355 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 154/243 (63%), Gaps = 9/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LEV AG GG E+ +A L RMYTR+AEK+ ++TE L+ + + G K +I Sbjct: 106 DDKNVILEVRAGTGGEEAALFAGDLFRMYTRYAEKQGWRTEVLDANYTDIGGFKEVVCMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS +++ V P ++ +EI+I+ +D RID Sbjct: 166 EGKGAYSRLKFESGVHRVQRVPSTESGGRIHTSAATVAVLPEAEE-VEIDINPNDLRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQK 291 + ++G GGQ VNTT SAVRITH+P+G+VV CQ E+SQHKNK +A +LRA+L +L E ++ Sbjct: 225 FCSTGPGGQSVNTTQSAVRITHLPSGLVVSCQDEKSQHKNKDKAMRVLRARLKDLAESEQ 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R E+A+ + K+ +G G +IR+Y P + D R + VL G++D+ ++ Sbjct: 285 RSELAS---TRKSMVGSGDRSERIRTYNF-PQNRITDHRIGLTTHRMPAVLMGEMDEIIE 340 Query: 349 ATL 351 A + Sbjct: 341 ALI 343 >gi|229917064|ref|YP_002885710.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b] gi|259585222|sp|C4KYV2|RF1_EXISA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229468493|gb|ACQ70265.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b] Length = 356 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 107/264 (40%), Positives = 155/264 (58%), Gaps = 13/264 (4%) Query: 97 LEVEYKQFES---LLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 LE E K+ E+ +L D ND +EV AGG E+ +A L +MYTR+AE++ + Sbjct: 85 LEPEVKELEAKLRILLLPKDPNDEKNVIVEVRGAAGGDEAALFAGDLYKMYTRFAERQNW 144 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E ++ + E G K T +I G AY LK E G HR+ R+ +S R HTS +++ Sbjct: 145 KVELIDANYTELGGFKEVTFMINGAGAYSKLKFENGAHRVQRVPSTESGGRIHTSTATVA 204 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +D +E+ I D R+DT+ +SG GGQ VNTT SAVR+THIP+G+VV CQ E+SQH Sbjct: 205 VLPEAED-VEVHIDMKDVRVDTFTSSGPGGQSVNTTQSAVRLTHIPSGLVVSCQDEKSQH 263 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327 KNK +A +LRA+LY+ ++Q E + + K+ +G G +IR+Y P V D R Sbjct: 264 KNKDKAMKVLRARLYD-KMQS-EHMEELSAQRKSAVGTGDRSERIRTYNF-PQSRVTDHR 320 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 + VL G+L+D + A + Sbjct: 321 IGLTLQKLDRVLAGELEDIIDALI 344 >gi|158426116|ref|YP_001527408.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571] gi|158333005|dbj|BAF90490.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571] Length = 357 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 107/251 (42%), Positives = 150/251 (59%), Gaps = 9/251 (3%) Query: 106 SLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +LL +A D LEV AG GG E+ +A L RMY R+A ++ + E L +G G Sbjct: 97 ALLPKDAMDERGVILEVRAGTGGDEAALFAGDLFRMYARYAAEKGWSVELLSESEGTVGG 156 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K + G AY LK E GVHR+ R+ +++ R HTS +++ V P +D ++++I+ Sbjct: 157 YKEVVAAVHGRGAYARLKFESGVHRVQRVPDTETSGRIHTSAATVAVLPEAED-VDVDIN 215 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ESD RID YRA GAGGQHVN T+SAVRITHIPTG+VV Q ERSQH+NKA+A +LR+++ Sbjct: 216 ESDLRIDVYRAQGAGGQHVNKTESAVRITHIPTGMVVAVQDERSQHRNKARAMALLRSRM 275 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 + E QK + AN K ++G G +IR+Y P V D R N+ +V+ G Sbjct: 276 LDEERQKAD--ANRAADRKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVMTG 332 Query: 342 D-LDDFMKATL 351 LD+ + L Sbjct: 333 QALDEIIDPLL 343 >gi|39998194|ref|NP_954145.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA] gi|61214645|sp|Q748B1|RF1_GEOSL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|39985140|gb|AAR36495.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA] gi|298507132|gb|ADI85855.1| peptide chain release factor 1 [Geobacter sulfurreducens KN400] Length = 355 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 99/240 (41%), Positives = 146/240 (60%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG ES +A L RMY+R+AE+ ++K E + + E G K LI Sbjct: 103 DDRNVILEIRAGTGGDESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALI 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + LK E G HR+ R+ ++ R HTS ++ V P +D IE++I+ +D +ID Sbjct: 163 EGQGVFAKLKYESGTHRVQRVPETEAQGRIHTSACTVAVLPEAED-IEVDINPADLKIDV 221 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN T+SAVRITHIPTG+VV+CQ ERSQ KN+A+A +L+ K+ L+ + Sbjct: 222 YRASGAGGQHVNKTESAVRITHIPTGIVVECQDERSQIKNRAKAMKVLKTKI--LDGLHQ 279 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A I K ++G G +IR+Y P + D R + +++GD+ + + A Sbjct: 280 EQNARIAADRKQQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDSLMEGDIAEVVDA 338 >gi|187251505|ref|YP_001875987.1| peptide chain release factor 1 [Elusimicrobium minutum Pei191] gi|186971665|gb|ACC98650.1| Peptide chain release factor [Elusimicrobium minutum Pei191] Length = 358 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 96/238 (40%), Positives = 153/238 (64%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS YLE+ GAGG ES +A +LR+Y R+A+ + +KTE LE G K A++ I Sbjct: 108 DSKSIYLELRPGAGGDESSIFAAEMLRVYQRFADAKGWKTELLEYTPTGLKGCKYASMFI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY WL+ E G HR+ R+ +++ R HTS ++ + P ++ ++I+I+ +D ++T Sbjct: 168 KGDGAYSWLRDESGTHRVQRVPDTETSGRVHTSTITVAIMPEAEE-VDIQINPADIEMET 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RA GAGGQ+VN ++AVR+ H PTGVVV C++ERSQ N+ +A NMLRAKLY++E +KR Sbjct: 227 CRAGGAGGQNVNKVETAVRLIHKPTGVVVSCREERSQGANRIKAMNMLRAKLYQMEEEKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + I ++ K+++G G +IR+Y P V D RT + +++++G +++ + Sbjct: 287 NK--EIYDTRKSQVGTGDRSEKIRTYNF-PQSRVTDHRTEKSYHNITEIMEGQIEEIL 341 >gi|254465069|ref|ZP_05078480.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I] gi|206685977|gb|EDZ46459.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I] Length = 351 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 107/256 (41%), Positives = 149/256 (58%), Gaps = 14/256 (5%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L ADS A LE+ G GG E+ +A LLRMY R+AE + +K + +E E Sbjct: 92 QLALLPKDAADSRPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEGQGWKFDIIEEQMTEL 151 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 GIK IKG N + LK E GVHR+ R+ +S R HTS +++ V P +D ++I Sbjct: 152 GGIKEVVAHIKGDNVFARLKYESGVHRVQRVPATESGGRIHTSAATVAVLPEAED-VDIH 210 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I +D RIDT RASGAGGQHVNTTDSAVRITH+PTG++V E+SQH+N+ A +L+ Sbjct: 211 IDANDIRIDTMRASGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHRNREIAMQVLKT 269 Query: 283 KLYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +LY+LE Q+ + + +G ++E +IR+Y P + D R N+ Sbjct: 270 RLYDLERQRIDSERSADRASQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLD 323 Query: 337 DVLDGDLDDFMKATLA 352 V+ GDLD+ + A A Sbjct: 324 QVMGGDLDEIIDALTA 339 >gi|163735803|ref|ZP_02143232.1| peptide chain release factor 1 [Roseobacter litoralis Och 149] gi|161390889|gb|EDQ15229.1| peptide chain release factor 1 [Roseobacter litoralis Och 149] Length = 351 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 103/248 (41%), Positives = 150/248 (60%), Gaps = 14/248 (5%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 +AD+ A LE+ G GG E+ +A L RMY R+AE + +K + +E+ + E GIK Sbjct: 100 KADAKPAMLEIRPGTGGDEAALFAGDLFRMYQRYAETQGWKVDVIELQETELGGIKEVVA 159 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG + + LK E GVHR+ R+ +S R HTS +++ V P +D ++I I +D RI Sbjct: 160 HIKGADVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAED-VDIHIEANDLRI 218 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+A+LY+LE Sbjct: 219 DTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKARLYDLERS 277 Query: 291 KREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + ++ A +G ++E +IR+Y P + D R N+ +L GDLD Sbjct: 278 RVDDERSADRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYRLDAILQGDLD 331 Query: 345 DFMKATLA 352 + + A A Sbjct: 332 EIIDALTA 339 >gi|154149107|ref|YP_001407141.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381] gi|166223542|sp|A7I3Q0|RF1_CAMHC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|153805116|gb|ABS52123.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381] Length = 355 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 105/236 (44%), Positives = 142/236 (60%), Gaps = 7/236 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A LL Y R+AE R +KTE + +G G K LL+ Sbjct: 104 DEKNIFLEIRAGTGGDEAALFAGDLLDAYLRYAELRGYKTEIVSQSEGSAGGFKEVILLV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ + P ++DS EI+I+E+D RID Sbjct: 164 KGDGAYSRLKFEGGTHRVQRVPETESQGRVHTSAITVAIMPEIEDS-EIQINENDLRIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY +LQ++ Sbjct: 223 MRASGHGGQCVNTTDSAVRITHIPTGLVVTNQDGKSQHKNKEAAMKVLKARLY--DLQEK 280 Query: 293 EEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E A K ++G G +IR+Y P + D R N+ ++ G L D Sbjct: 281 ERKAKEQSERKDQVGTGDRSGRIRTYNY-PQNRITDHRINLTLYRLDAIMAGGLFD 335 >gi|89898158|ref|YP_515268.1| peptide chain release factor 1 [Chlamydophila felis Fe/C-56] gi|119361521|sp|Q255B5|RF1_CHLFF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|89331530|dbj|BAE81123.1| peptide chain release factor RF-1 [Chlamydophila felis Fe/C-56] Length = 361 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 123/345 (35%), Positives = 190/345 (55%), Gaps = 19/345 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL---ELA 76 ++RL + K DP ++ N E L RE L + +K + D++ + +L + A Sbjct: 9 LKRLEEVEVKISDPEIFNNPKEYSSLSREHARL----TELKNVYDKVLRHEKILNDDKHA 64 Query: 77 L-EEDDCSILQETSDNLQRIKLEVE--YKQFESLLSGEADSND--AYLEVHAGAGGTESQ 131 L +E D ++ + +Q K E+E YK E+LL +D +E+ AG GG E+ Sbjct: 65 LAQEKDPEMIAMLEEGIQSGKSEIEKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + +RMY +A + +K E L + + G K + I G L+ E G HR+ Sbjct: 125 LFVGDCVRMYHLYASAKGWKYEELSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P +D E+ + E D +IDT+RASGAGGQHVN TDSAV Sbjct: 185 RVPETETQGRVHTSAITVAVLPEPAEDDEEVFVDEKDLKIDTFRASGAGGQHVNVTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTGVVV CQ ERSQHKNKA+A +L+A++ + E+Q+R + A+ S+ ++G G Sbjct: 245 RITHLPTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRSA--QVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y + V D R + + V++GDLD A ++ Sbjct: 303 RSERIRTYNFSQNR-VTDHRIGLTLYNLDKVMEGDLDTITSALVS 346 >gi|227823188|ref|YP_002827160.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234] gi|227342189|gb|ACP26407.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234] Length = 352 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 99/244 (40%), Positives = 151/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A + ++ E L +GE G K Sbjct: 99 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAAKGWRVEVLSASEGEAGGYKEIIAT 158 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +++ R HTS +++ V P ++ I+IEI D RID Sbjct: 159 VSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEE-IDIEIRAEDIRID 217 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+A+A +LR++L+++E Q+ Sbjct: 218 TMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRAKAMQVLRSRLFDMERQR 276 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P + D R N+ +++G++D+ + Sbjct: 277 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDEVVD 333 Query: 349 ATLA 352 A LA Sbjct: 334 ALLA 337 >gi|320529373|ref|ZP_08030461.1| peptide chain release factor 1 [Selenomonas artemidis F0399] gi|320138339|gb|EFW30233.1| peptide chain release factor 1 [Selenomonas artemidis F0399] Length = 354 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 99/242 (40%), Positives = 147/242 (60%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG E+ +A L RMY R+AE++ ++TE L ++ E G K + L+ Sbjct: 105 DDKNVIVEIRGGVGGEEAALFAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLV 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ RI +S R HTS ++ V P +D +E+ I +D RIDT Sbjct: 165 TGAGAYSKLKYESGTHRVQRIPVTESGGRIHTSAVTVAVLPEAED-VEVTIDPNDLRIDT 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQ+VN T++A+RITH+PTG+VVQCQ E+SQ KNK +A +LRA++Y+ Q Sbjct: 224 YCASGAGGQYVNRTETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYDRAQQ-- 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + ++++G G +IR+Y P V D R + VLDG+L++ + A Sbjct: 282 EQADAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELEELLAA 340 Query: 350 TL 351 + Sbjct: 341 LI 342 >gi|228994048|ref|ZP_04153949.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442] gi|229000115|ref|ZP_04159685.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17] gi|229007635|ref|ZP_04165229.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4] gi|228753646|gb|EEM03090.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4] gi|228759652|gb|EEM08628.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17] gi|228765696|gb|EEM14349.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442] Length = 358 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNDVLDRLQAVENRYEKLNELLSDPEVISDSNKLREYSKEQSDMQETVEVYREYKDVRAQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ D +++E L+ E E + +L D ND +EV Sbjct: 61 LRDAKAMLEEKLDADMREMVKEEVSELE--GQEKELSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|291550093|emb|CBL26355.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus torques L2-14] Length = 356 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 98/243 (40%), Positives = 150/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A + RMY +A+ R++KTE + +++ G K +I Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E GVHR+ R+ +S R HTS ++ V P ++ +++ I E D RID Sbjct: 166 TGQGAYSRMKYESGVHRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIDEKDIRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLY+LEL+K+ Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKK 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A+ +++IG G +IR+Y P V D R + +L+GDLD+ + + Sbjct: 285 Q--ASEAAERRSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDS 341 Query: 350 TLA 352 +A Sbjct: 342 LIA 344 >gi|237753220|ref|ZP_04583700.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC BAA-430] gi|229375487|gb|EEO25578.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC BAA-430] Length = 356 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 124/347 (35%), Positives = 191/347 (55%), Gaps = 27/347 (7%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQD-----RLCDNL 70 ++R ++T DP++ ++ L +E+ L+ + +++ +Q L D+ Sbjct: 10 IKRYDEISTLLVDPNILNDIKRITELSKEQSDLEELVEKARAYLNNLQSIEENKALLDDK 69 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTE 129 L +LA EE ++ET Q +KLE E K LL + D + YLE+ AG GG E Sbjct: 70 ELGDLAKEE-----IKETE--TQNVKLEAEIKVL--LLPKDPNDDKNIYLELRAGTGGDE 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + + L R Y R+A+ + +K E + + G K L+KG AY LK E G HR Sbjct: 121 AGIFVGDLFRAYVRYADLKGWKVEIISSSENSVGGYKEIIALVKGKGAYSRLKYEGGTHR 180 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ + P VDD +E+ I+ +D RI+ +RA G GGQ VNTTDSA Sbjct: 181 VQRVPATESQGRVHTSAITVAIMPEVDD-VEVVINPNDLRIEVFRAGGHGGQCVNTTDSA 239 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNK +A +L+A++YE EL+ + E E+ K+++G G Sbjct: 240 VRITHIPTGISVSMQDEKSQHKNKDKAMKILKARIYEAELEAQME--QNAEARKSQVGSG 297 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 +IR+Y P + D R + S ++ L G+LD + +A Sbjct: 298 DRSERIRTYNY-PQNRLTDHRVGLTLYSLEEIMLSGNLDSVIDPIVA 343 >gi|313896150|ref|ZP_07829704.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str. F0430] gi|312975575|gb|EFR41036.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str. F0430] Length = 354 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 99/242 (40%), Positives = 147/242 (60%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG E+ +A L RMY R+AE++ ++TE L ++ E G K + L+ Sbjct: 105 DDKNVIVEIRGGVGGEEAALFAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLV 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ RI +S R HTS ++ V P +D +E+ I +D RIDT Sbjct: 165 TGAGAYSKLKYESGTHRVQRIPVTESGGRIHTSAVTVAVLPEAED-VEVTIDPNDLRIDT 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQ+VN T++A+RITH+PTG+VVQCQ E+SQ KNK +A +LRA++Y+ Q Sbjct: 224 YCASGAGGQYVNRTETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYDRAQQ-- 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + ++++G G +IR+Y P V D R + VLDG+L++ + A Sbjct: 282 EQADAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELEELLAA 340 Query: 350 TL 351 + Sbjct: 341 LI 342 >gi|163746457|ref|ZP_02153815.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45] gi|161380342|gb|EDQ04753.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45] Length = 351 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 104/247 (42%), Positives = 148/247 (59%), Gaps = 14/247 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ G GG E+ +A LLRMY R+AE R + + +E E G+K Sbjct: 101 ADAKPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWGFDLIESQMTELGGVKEVVAH 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G N + LK E GVHR+ R+ +S R HTS +++ V P +D ++IEI+ +D RID Sbjct: 161 ITGQNVFARLKFESGVHRVQRVPSTESGGRIHTSAATVAVLPEAED-VDIEINANDLRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITHIPTG+VV E+SQH+N+ +A +L+A+LY++E + Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHIPTGIVV-TSSEKSQHRNRDKAMQVLKARLYDMERGR 278 Query: 292 ------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + A +G ++E +IR+Y P + D R N+ V+ GDLD+ Sbjct: 279 IDSERSADRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYRLEAVMQGDLDE 332 Query: 346 FMKATLA 352 + A A Sbjct: 333 IIDALTA 339 >gi|116254019|ref|YP_769857.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae 3841] gi|119361588|sp|Q1MBB2|RF1_RHIL3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|115258667|emb|CAK09771.1| putative peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae 3841] Length = 359 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A ++ +K E L +GE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ITGKGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRAEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P V D R N+ +++G++++ + Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALMA 345 >gi|254509155|ref|ZP_05121254.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16] gi|219547906|gb|EED24932.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16] Length = 362 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 114/322 (35%), Positives = 183/322 (56%), Gaps = 17/322 (5%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI------- 84 DP + + + + L +E L+ + Q + ++L+ E +EDD + Sbjct: 25 DPDIIGDQDKFRALSKEYSQLEEVTKCFQAYQ-QAQEDLVAAEEMAKEDDEEMREMAQEE 83 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 ++E + ++R+ E+ Q L D + +LE+ AGAGG E+ +A L RMY+++ Sbjct: 84 IKEAKETIERLTDEL---QILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKF 140 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AEK+ ++ E + ++ E G K + G AYG LK E G HR+ R+ +S R HT Sbjct: 141 AEKQGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATESQGRVHT 200 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PTG VV+CQ Sbjct: 201 SACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPTGTVVECQ 260 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321 ERSQHKNKA+A +L A++ ++ ++ + A ++ + +G G +IR+Y P Sbjct: 261 DERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRSDRIRTYNY-PQG 317 Query: 322 MVKDLRTNIEKTSPSDVLDGDL 343 V D R N+ ++V++GDL Sbjct: 318 RVSDHRINLTIYRLNEVMEGDL 339 >gi|239628684|ref|ZP_04671715.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518830|gb|EEQ58696.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 357 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 118/329 (35%), Positives = 193/329 (58%), Gaps = 13/329 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDCSIL-QE 87 DP + Q+ LM+E+ L A K+ + + D+L LLE +E+ + +E Sbjct: 21 DPAVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVEDSLALLEEENDEEMREMAKEE 80 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 SD +RI+ E+E++ LL + D + LE+ AGAGG E+ +A L RMY+ +A+ Sbjct: 81 LSDAKKRIE-ELEHELKILLLPKDPNDDKNIILEIRAGAGGDEAALFAAELYRMYSNYAD 139 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++K E + +++ G K ++ G AY LK E GVHR+ R+ +S R HTS Sbjct: 140 SHRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGVHRVQRVPETESGGRIHTST 199 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +++ V P ++ ++++I +D RID RASG GGQ VNTTDSAVR+TH+PTG+V+ Q E Sbjct: 200 ATVAVMPEAEE-VDVQIDMNDIRIDVMRASGNGGQCVNTTDSAVRLTHMPTGIVIYSQTE 258 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323 +SQ +NK +A+ +LR+KLY++EL+KR+ ++ E +++IG G +IR+Y P V Sbjct: 259 KSQLQNKEKAFRLLRSKLYDIELEKRQ--SSEAEERRSQIGTGDRSEKIRTYNF-PQGRV 315 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R + +++GD+ + + +A Sbjct: 316 TDHRIKLTLYKIDSIMNGDIQELLDNLIA 344 >gi|226307404|ref|YP_002767364.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4] gi|229489997|ref|ZP_04383850.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121] gi|226186521|dbj|BAH34625.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4] gi|229323098|gb|EEN88866.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121] Length = 359 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 127/345 (36%), Positives = 182/345 (52%), Gaps = 21/345 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ + + L + DP L + A+ + + L +S ++ D ELA Sbjct: 11 DDILAEHAGLEAQMSDPALHNDPAAARRVGKRFSELSPIMSTYNKLTAAQDDLEAARELA 70 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA------DSNDAYLEVHAGAGGTES 130 DD S E D LE E Q E L+ + D +D LEV +G GG ES Sbjct: 71 A--DDSSFAAEIPD------LEAEVAQLEQTLTDQLAPRDPHDGDDIVLEVKSGEGGEES 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----PNA-YGWLKGEQ 185 +A+ L RMY R+AE+ ++ E L+ + G K ATL IK P+ + LK E Sbjct: 123 ALFASDLARMYVRYAERHGWRVEILDATVSDLGGYKEATLSIKSKSDTPDGVWARLKFEG 182 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + VYP ++ +++I ESD RID YR+SG GGQ VNT Sbjct: 183 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNT 242 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV CQ ERSQ +NKA+A +L A+L + + + A+ G S+ Sbjct: 243 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQVVAEEAADAEASAGRQSQVR 302 Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +IR+Y P + D R + + VLDG+LD + A Sbjct: 303 TVDRSERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDA 346 >gi|87198313|ref|YP_495570.1| peptide chain release factor 1 [Novosphingobium aromaticivorans DSM 12444] gi|119361571|sp|Q2GBN7|RF1_NOVAD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|87133994|gb|ABD24736.1| bacterial peptide chain release factor 1 (bRF-1) [Novosphingobium aromaticivorans DSM 12444] Length = 354 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 108/281 (38%), Positives = 166/281 (59%), Gaps = 12/281 (4%) Query: 80 DDCSILQETSDNLQRIKLEV---EYKQFESLLSGE-ADSNDAYLEVHAGAGGTESQDWAN 135 DD + + + L RI+ E+ E++ ++L + AD+ A LE+ AG GG E+ +A Sbjct: 66 DDPDMRELADEELARIRAELPEAEHRLAVAMLPRDSADARPAMLEIRAGTGGDEAALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY R+A ++ ++ E + ++ + G K + G + LK E GVHR+ R+ Sbjct: 126 DLFRMYERYAAEQGWRVETISVNANDLGGYKEVVANVAGQGVFAKLKFESGVHRVQRVPV 185 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ V P D+ +++ I + D +ID YRASGAGGQHVNTTDSAVRITH+ Sbjct: 186 TESGGRIHTSAATVAVLPEPDE-VDVAIEDKDLKIDIYRASGAGGQHVNTTDSAVRITHL 244 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+G+VV CQ ERSQHKNKA+A +LR +LY ++++ E+ K +G G +I Sbjct: 245 PSGLVVTCQDERSQHKNKAKAMQVLRTRLY--DMRREAAQGAEAEARKAMVGSGDRSERI 302 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 R+Y P V D R N+ ++L+G L + + A +A Sbjct: 303 RTYNF-PQGRVTDHRINLTLHRLPEILEGPGLAELIDALIA 342 >gi|90416952|ref|ZP_01224881.1| Peptide chain release factor 1 [marine gamma proteobacterium HTCC2207] gi|90331299|gb|EAS46543.1| Peptide chain release factor 1 [marine gamma proteobacterium HTCC2207] Length = 360 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 96/239 (40%), Positives = 146/239 (61%), Gaps = 8/239 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +LE+ AG GG E+ ++ L RMY+++AE ++K E + + G+ G K I Sbjct: 109 DSKNVFLEIRAGTGGDEAAIFSGDLFRMYSKYAETNRWKVEIISENSGDHGGYKEVIARI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ + D+ IEI++ D R+DT Sbjct: 169 VGQGVYSKLKFESGAHRVQRVPDTESQGRVHTSACTVAIMAEADEQDAIEINKGDLRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG+GGQHVN TDSA+R+TH+P+G+VV+CQ ERSQHKN+A+A ++L+A+L ++ Sbjct: 229 FRASGSGGQHVNKTDSAIRLTHLPSGLVVECQDERSQHKNRAKAMSVLQARLTAMQ---D 285 Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E +A + K +G G +IR+Y P V D R N+ +V++G LDD + Sbjct: 286 EAVAKEQSDQRKNLVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLGEVMEGSLDDVL 343 >gi|66769665|ref|YP_244427.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris str. 8004] gi|81304380|sp|Q4URB6|RF1_XANC8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|66574997|gb|AAY50407.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris str. 8004] Length = 361 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY R+AE++ +K E GE G K + Sbjct: 107 DEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P DD EI I+ +D ++DT Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A L+A+L E E K Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK- 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348 A ++ K ++G G ++IR+Y P + D R + ++++GDLD + Sbjct: 286 -AAAAKAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIA 343 Query: 349 ATL 351 L Sbjct: 344 RLL 346 >gi|296127053|ref|YP_003634305.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563] gi|296018869|gb|ADG72106.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563] Length = 358 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 100/240 (41%), Positives = 140/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG ES + L RMY+R+ E+ K E ++ E G K + Sbjct: 108 DGKNIIIEIRVGTGGDESALFVGDLFRMYSRFIERANLKMEIIDTSPTELGGYKEVIFSV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G NAY LK E G HR+ RI +S R HTS S++ V P +S ++ I + D R+D Sbjct: 168 SGKNAYRALKFESGTHRVQRIPATESGGRIHTSASTVAVMPEAMES-DVVIKDEDIRVDI 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVRITH+PTG+VVQCQ E+SQHKNKA+A +LRA++YE E +R Sbjct: 227 FRSSGPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +IG G +IR+Y P V D R N+ +DG++ + A Sbjct: 287 K--AKEAKERREQIGSGDRSERIRTYNF-PQNRVTDHRINLTLYKLDRFMDGEITEITDA 343 >gi|332971801|gb|EGK10749.1| peptide chain release factor RF1 [Desmospora sp. 8437] Length = 358 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 122/339 (35%), Positives = 184/339 (54%), Gaps = 17/339 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELAL 77 QR LN +P + N + +E+ L+ +A KE+ D+ + I+LE Sbjct: 13 QRYEELNQLLSNPEVIHNADLLRKYSKEQSDLEPKYHAYCEYKEVADQYEEARIMLE--- 69 Query: 78 EEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EE D +L L+ R K E + L D + +E+ AGG E+ + Sbjct: 70 EESDPEMLDLVKTELEQLSDRKKALEEEIRLLLLPKDPNDDKNVIVEIRGAAGGEEAALF 129 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYTR+ E+ +K+E L+ + G K ++G AY LK E G HR+ R+ Sbjct: 130 AADLYRMYTRYGERMGWKSEILDTNTTGLGGFKEVVFSVQGQGAYSRLKYESGAHRVQRV 189 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS +++ V P ++ +++EI + D RIDT+ +SG GGQ VNTT SAVRIT Sbjct: 190 PTTESGGRIHTSTATVAVLPEAEE-VDVEIQDKDLRIDTFCSSGPGGQSVNTTKSAVRIT 248 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VV CQ E+SQ KNK +A +LRA+L L+ +++EE A + ++ K ++G G Sbjct: 249 HLPTGIVVSCQDEKSQIKNKEKAMRVLRARL--LDQKQQEEEAKMADARKVQVGTGDRSE 306 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + V+DGDLD+ + A Sbjct: 307 RIRTYNF-PQSRVTDHRIGLTLHKLDLVMDGDLDEIVDA 344 >gi|225621133|ref|YP_002722391.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1] gi|254790865|sp|C0QWA1|RF1_BRAHW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225215953|gb|ACN84687.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1] Length = 358 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 100/240 (41%), Positives = 140/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG ES + L RMYTR+ E+ K E ++ E G K + Sbjct: 108 DGKNIIVEIRVGTGGDESALFVGDLFRMYTRFIERTNLKMEIIDTSPTELGGYKEVIFSV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +AY LK E G HR+ RI +S R HTS S++ V P +S ++ I + D R+D Sbjct: 168 SGKDAYRTLKFESGTHRVQRIPATESGGRIHTSASTVAVMPEAMES-DVVIKDEDIRVDI 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVRITH+PTG+VVQCQ E+SQHKNKA+A +LRA++YE E +R Sbjct: 227 FRSSGPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A + + +IG G +IR+Y P V D R N+ +DG++ + A Sbjct: 287 K--AKEAKERREQIGSGDRSERIRTYNF-PQNRVTDHRINVTLYKLDRFMDGEITEITDA 343 >gi|229816317|ref|ZP_04446624.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM 13280] gi|229808073|gb|EEP43868.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM 13280] Length = 355 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 122/331 (36%), Positives = 184/331 (55%), Gaps = 15/331 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL---ALEEDDC 82 L K DP + ++ E L +E H + + +E L D + E+ A++ D+ Sbjct: 15 LEKKLSDPAVASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIDVAKEMLHDAVDADEK 74 Query: 83 SILQ-ETSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139 +LQ E S+N ++ +LE + K L+ G+ D D +E+ + AGG E+ +A L + Sbjct: 75 EMLQMEISENEAKLPQLEEDIKIM--LIPGDPMDEKDTIVEIRSAAGGDEAAIFAGDLFK 132 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ E +K+K L+ E G KS ++G Y +K E GVHR+ R+ +S Sbjct: 133 MYQRFIESKKWKMTVLDSSPSEAGGFKSIEFKVEGDKVYSVMKYESGVHRVQRVPKTESQ 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R TS +++ V P D+ I+I+I+++D R+DTY ASG GGQ VNTT SAVRITH+PT Sbjct: 193 GRIQTSTATVAVLPEADE-IDIQINQADLRVDTYCASGPGGQCVNTTYSAVRITHLPTNT 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VVQ Q++RSQ +N+ MLRA+LYE+EL+K++ A +G +IG G +IR+Y Sbjct: 252 VVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQ--AELGAERSAQIGHGNRSEKIRTYN 309 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 L P V D R T +L L D + Sbjct: 310 L-PQDRVTDHRIGFNSTYNGVLLGDQLSDVI 339 >gi|194364499|ref|YP_002027109.1| peptide chain release factor 1 [Stenotrophomonas maltophilia R551-3] gi|238693440|sp|B4SKS8|RF1_STRM5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194347303|gb|ACF50426.1| peptide chain release factor 1 [Stenotrophomonas maltophilia R551-3] Length = 360 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 147/240 (61%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY R+AE++ +K E + GE G K + Sbjct: 107 DDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGYKEVVARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A+ LK E G HR+ R+ +S R HTS +++ + P D+ +I I+ +D R+DT Sbjct: 167 VGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEVDDIVINPADLRVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH N+ +A L+A+L + E Q++ Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLLDAERQRQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348 + A ES + ++G G ++IR+Y P + D R + ++L GDLD ++ Sbjct: 287 D--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRVEGLTLYDLPNILAGDLDPLLQ 343 >gi|292669720|ref|ZP_06603146.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541] gi|292648517|gb|EFF66489.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541] Length = 354 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 148/243 (60%), Gaps = 9/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG E+ +A L RMY R+AE++ ++TE L + E G K + L+ Sbjct: 105 DDKNVIVEIRGGVGGEEAALFAASLFRMYARYAERQGWRTEILSSNPTEIGGFKEISFLV 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ RI +S R HTS ++ V P +D +E+ I +D RIDT Sbjct: 165 NGAGAYSRLKYESGTHRVQRIPVTESGGRIHTSAVTVAVLPEAED-VEVTIDPNDLRIDT 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQ+VN T++A+RITHIP+G+VVQCQ E+SQ KN+ +A +LRA+LY+ + R Sbjct: 224 YCASGAGGQYVNRTETAIRITHIPSGIVVQCQDEKSQLKNREKAMKVLRARLYD---RAR 280 Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +E A+ + ++++G G +IR+Y P V D R + VLDG+LD+ + Sbjct: 281 QEQADAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELDEILA 339 Query: 349 ATL 351 + Sbjct: 340 GLI 342 >gi|284047800|ref|YP_003398139.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM 20731] gi|283952021|gb|ADB46824.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM 20731] Length = 358 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 103/279 (36%), Positives = 164/279 (58%), Gaps = 11/279 (3%) Query: 80 DDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWAN 135 +D + + +Q ++ +E Y++ +LL D ND +E+ AGAGG E+ +A Sbjct: 72 EDQELTAMAEEEMQELQPRLEAYEEKLTLLLLPRDPNDEKNIIMEIRAGAGGDEAALFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMYTR+AE++ +K E ++ G K ++ G + Y +K E GVHR+ R+ Sbjct: 132 DLFRMYTRYAEQKGWKVELMDSSPTGLGGFKEVVFMVSGTDVYSHMKFESGVHRVQRVPD 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P + ++IE++ +D R+DTYRA GAGGQ+VN T+SAVR+THI Sbjct: 192 TESQGRVHTSTVTVAVMPEAQE-VDIELNPADIRVDTYRAGGAGGQYVNKTESAVRMTHI 250 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+V QCQ E+SQ KN+ + +LR+++ E E +K+ A K+++G G +I Sbjct: 251 PTGIVAQCQDEKSQAKNREKCLRVLRSRILEAEQEKQR--AATAAERKSQVGTGDRSERI 308 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R + D+++GDLD+ + A + Sbjct: 309 RTYNY-PQGRVTDHRIGLTLHKLPDIINGDLDELLDALM 346 >gi|331002270|ref|ZP_08325789.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411364|gb|EGG90780.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str. F0167] Length = 355 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 168/291 (57%), Gaps = 19/291 (6%) Query: 77 LEEDDCSILQETSDNLQRIKLE--VEYKQFESLLSGE-------ADSNDA---YLEVHAG 124 L+ED +L+ D ++ + E E K+ E LS + D ND LE+ AG Sbjct: 57 LQEDALEMLEMNDDEMKEMAKEELAEGKRLEEELSEKLKILLLPKDPNDEKNIMLEIRAG 116 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L RMY +AE + +K E +++++ G K ++ G AY LK E Sbjct: 117 AGGDEAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYE 176 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS +S+ V P ++ ++++I +D RID RASG GGQ VN Sbjct: 177 SGVHRVQRVPETESGGRIHTSTASVAVMPEAEE-VDVQIDMNDVRIDVMRASGNGGQCVN 235 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYE+EL+K++ ++ Sbjct: 236 TTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRSKLYEIELEKKQSAE--AADRRS 293 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IG G +IR+Y P V D R N+ +++GD+ + + +A Sbjct: 294 QIGTGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIA 343 >gi|227513055|ref|ZP_03943104.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577] gi|227083630|gb|EEI18942.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577] Length = 361 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 121/350 (34%), Positives = 190/350 (54%), Gaps = 17/350 (4%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD AV R LN DP + + L +E L + ++ KE+ +L D Sbjct: 4 IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63 Query: 69 NLILLELALEEDDCS--ILQETSD-NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAG 124 + +L +++ D + E SD Q+ KLE + K LL + D + +E+H Sbjct: 64 DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVM--LLPKDPNDEKNIIMEIHGA 121 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E +A L MY+++AE++ +K E ++ + E G K L+I G Y LK E Sbjct: 122 AGGDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYE 181 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +++ V P +D ++I+I D R+D YR+SGAGGQH+N Sbjct: 182 NGAHRVQRVPVTESAGRVHTSTATVGVMPEEED-VDIDIDPKDIRVDVYRSSGAGGQHIN 240 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ Q+ ++ N K+ Sbjct: 241 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNA--ERKS 298 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IG G +IR+Y P V D R + +++G+LDD + A + Sbjct: 299 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALI 347 >gi|238927406|ref|ZP_04659166.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531] gi|238884688|gb|EEQ48326.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531] Length = 354 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 99/238 (41%), Positives = 144/238 (60%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG E+ +A L RMY R+AE++ ++TE L + E G K T L+ Sbjct: 105 DEKNVIVEIRGGVGGEEAALFAASLFRMYVRYAERQGWRTEVLSSNPTEIGGFKEITFLV 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ RI +S R HTS ++ V P ++ +E+ I +D RIDT Sbjct: 165 SGTAAYSKLKYESGTHRVQRIPVTESGGRIHTSAVTVAVLPEAEE-VEVTIDPNDLRIDT 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQ+VN T++A+RITHIPTG+VVQCQ E+SQ KN+ +A +LRA+LY+ Q Sbjct: 224 YCASGAGGQYVNRTETAIRITHIPTGIVVQCQDEKSQLKNREKAMKVLRARLYDRAQQ-- 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E+ + ++++G G +IR+Y P V D R + V+DG+LD+ + Sbjct: 282 EQADAVAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDAVMDGELDELL 338 >gi|227510126|ref|ZP_03940175.1| peptide chain release factor 1 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190331|gb|EEI70398.1| peptide chain release factor 1 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 357 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 121/350 (34%), Positives = 190/350 (54%), Gaps = 17/350 (4%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD AV R LN DP + + L +E L + ++ KE+ +L D Sbjct: 4 IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63 Query: 69 NLILLELALEEDDCS--ILQETSD-NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAG 124 + +L +++ D + E SD Q+ KLE + K LL + D + +E+H Sbjct: 64 DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVM--LLPKDPNDEKNIIMEIHGA 121 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E +A L MY+++AE++ +K E ++ + E G K L+I G Y LK E Sbjct: 122 AGGDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYE 181 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +++ V P +D ++I+I D R+D YR+SGAGGQH+N Sbjct: 182 NGAHRVQRVPVTESAGRVHTSTATVGVMPEEED-VDIDIDPKDIRVDVYRSSGAGGQHIN 240 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ Q+ ++ N K+ Sbjct: 241 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNA--ERKS 298 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IG G +IR+Y P V D R + +++G+LDD + A + Sbjct: 299 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALI 347 >gi|253702392|ref|YP_003023581.1| peptide chain release factor 1 [Geobacter sp. M21] gi|251777242|gb|ACT19823.1| peptide chain release factor 1 [Geobacter sp. M21] Length = 359 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 117/323 (36%), Positives = 177/323 (54%), Gaps = 20/323 (6%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + N E + L +E L ++ +E + L D EL E D QE + Sbjct: 23 DPEVLANQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEPD-----QEMREM 77 Query: 92 LQRIKLEVEYKQFE-----SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTR 143 Q L +E ++ E LL D ND LE+ AG GG ES +A L RMY+R Sbjct: 78 AQAELLSLEARREELEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSR 137 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +AE +++ E + + E+ G K L++G + LK E G HR+ R+ ++ R H Sbjct: 138 FAETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIH 197 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS ++ V P +D ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV C Sbjct: 198 TSACTVAVMPEAED-VDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVAC 256 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q+ERSQ KN+A+A +L++++ + L E+ A + K+++G G +IR+Y P Sbjct: 257 QEERSQIKNRAKAMKVLKSRILDNILM--EQNAKLAADRKSQVGSGDRSERIRTYNF-PQ 313 Query: 321 QMVKDLRTNIEKTSPSDVLDGDL 343 + D R + ++ GD+ Sbjct: 314 GRMTDHRIGLTLYRLDAIMAGDI 336 >gi|153845428|ref|ZP_01993769.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810] gi|149745113|gb|EDM56364.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810] Length = 148 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 88/144 (61%), Positives = 110/144 (76%), Gaps = 1/144 (0%) Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S +YP +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +R Sbjct: 2 SALIYPEIDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDR 61 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK QA LRAKL+ELELQK+ E +K++IGWG QIRSYVL + +KDLR Sbjct: 62 SQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IKDLR 120 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T +E + VLDGDLD F++A+L Sbjct: 121 TGVENRNTQAVLDGDLDKFIEASL 144 >gi|21230341|ref|NP_636258.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|188992877|ref|YP_001904887.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris str. B100] gi|24418637|sp|Q8PC68|RF1_XANCP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229576663|sp|B0RUA5|RF1_XANCB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21111894|gb|AAM40182.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|167734637|emb|CAP52847.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris] Length = 361 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY R+AE++ +K E GE G K + Sbjct: 107 DEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P DD EI I+ +D ++DT Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A L+A+L E E K Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK- 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348 A ++ K ++G G ++IR+Y P + D R + ++++GDLD + Sbjct: 286 -AAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIA 343 Query: 349 ATL 351 L Sbjct: 344 RLL 346 >gi|150397700|ref|YP_001328167.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419] gi|166223607|sp|A6UCF2|RF1_SINMW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|150029215|gb|ABR61332.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419] Length = 360 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 99/244 (40%), Positives = 149/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A + ++ E L +GE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAGKGWRVEVLSASEGEAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ ++ R HTS +++ V P +D I+I+I D R+D Sbjct: 167 VSGRGVFSRLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED-IDIDIRSEDIRVD 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+A+A +LR++LY++E Q+ Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHQNRAKAMQVLRSRLYDMERQR 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + + ++G G +IR+Y P + D R N+ V++G++D+ + Sbjct: 285 AD--SERSADRRNQVGSGDRSERIRTYNF-PQGRLTDHRINLTIYKLDRVMEGEIDEIVD 341 Query: 349 ATLA 352 A LA Sbjct: 342 ALLA 345 >gi|218672481|ref|ZP_03522150.1| peptide chain release factor 1 [Rhizobium etli GR56] Length = 352 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A ++ +K E L +GE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKSWKVEVLSASEGEAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P V D R N+ +++G++++ + Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALMA 345 >gi|313203258|ref|YP_004041915.1| bacterial peptide chain release factor 1 (brf-1) [Paludibacter propionicigenes WB4] gi|312442574|gb|ADQ78930.1| bacterial peptide chain release factor 1 (bRF-1) [Paludibacter propionicigenes WB4] Length = 361 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 97/234 (41%), Positives = 141/234 (60%), Gaps = 7/234 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +E+ G GG E+ +A L +MYT++ E + ++ E I +G G K + Sbjct: 111 DNKNAIVEIRGGTGGDEAAIFAGDLFKMYTKYCETKGWRLEITNISEGTAGGYKEIIFTV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +++ V P +++ + E+ ESD R+DT Sbjct: 171 TGENVYGTLKYESGVHRVQRVPQTETQGRVHTSAATVAVLPEMEE-FDYELKESDVRVDT 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SA+R+ HIPTG VQCQ E+SQHKNKA+A N LR++LY +E QK Sbjct: 230 FCSSGAGGQSVNTTYSAIRLVHIPTGTTVQCQDEKSQHKNKAKAMNELRSRLYAIEHQKY 289 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 + IG KT + G +IR+Y P + D R N + S + GD+ Sbjct: 290 --LDEIGSKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINFTIYNLSAFMGGDI 340 >gi|297182635|gb|ADI18793.1| protein chain release factor a [uncultured SAR11 cluster bacterium HF4000_37C10] Length = 358 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 101/239 (42%), Positives = 145/239 (60%), Gaps = 7/239 (2%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L EADS +A LE+ AG GG E+ + L +MY R +K+ E + + E G K Sbjct: 101 LPKDEADSKNAILEIRAGTGGLEATLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFK 160 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 LLIKG N Y +LK E GVHR+ R+ ++ R HTS +++ V P ++ I++ I+E Sbjct: 161 EVILLIKGTNIYSFLKFESGVHRVQRVPETETQGRVHTSAATVAVLPEAEE-IDVNINEK 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQHKN+A+A +LR+++Y+ Sbjct: 220 DLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQHKNRAKAMKILRSRVYD 279 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 E + ++ + K +IG G +IR+Y P V D R N+ + L+GD Sbjct: 280 AE--REKKDKKRSKDRKNQIGSGDRSERIRTYNF-PQSRVTDHRINLTIHKLQEFLNGD 335 >gi|225437801|ref|XP_002274067.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297744098|emb|CBI37068.3| unnamed protein product [Vitis vinifera] Length = 392 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 105/248 (42%), Positives = 151/248 (60%), Gaps = 14/248 (5%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD D LEV AG GG E+ +A + +MY ++++K +K E ++I + + G K A+ Sbjct: 130 EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASG 189 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G YG LK E G+HR+ R+ + + R HTS S+ + P D+ +++++ D RI Sbjct: 190 AISGSGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADE-VDVQLRNEDLRI 248 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-- 288 DTYR+ G+GGQH NTT+SAVRITHIP+G+ V Q ERSQH NKA+A +L AKLYE+E Sbjct: 249 DTYRSGGSGGQHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERS 308 Query: 289 -LQK---REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DL 343 +QK + + IG ++E +IR+Y P V D R I S +DV+ G +L Sbjct: 309 RIQKDRSKLRMEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGITHHSVNDVMQGENL 362 Query: 344 DDFMKATL 351 D F+ A L Sbjct: 363 DVFIDALL 370 >gi|218783033|ref|YP_002434351.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans AK-01] gi|226739100|sp|B8FEA2|RF1_DESAA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|218764417|gb|ACL06883.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans AK-01] Length = 355 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 100/240 (41%), Positives = 143/240 (59%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMY+R+AE R +K E L H GIK +I Sbjct: 105 DDKNVILEIRAGTGGDEAGLFAADLFRMYSRYAETRGWKVETLSEHLTGVGGIKEIAAMI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y K E G HR+ R+ ++ R HTS ++ V P ++ ++I+I S+ R+D Sbjct: 165 TGQGVYSAFKFESGTHRVQRVPVTEAQGRIHTSACTVAVLPEAEE-VDIQIDPSEIRVDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+ GAGGQHVNTTDSAVR+TH+PTGVVV CQ E+SQHKNKA+A +LRA+L + +Q Sbjct: 224 YRSQGAGGQHVNTTDSAVRLTHLPTGVVVTCQDEKSQHKNKAKAMKVLRARLLDHAVQ-- 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A+I K+++G G +IR+Y P V D R + ++ G + + + A Sbjct: 282 EQNASISAERKSQVGSGDRSERIRTYNY-PQGRVTDHRIGLTLYKLESIMAGQISEIVDA 340 >gi|147679165|ref|YP_001213380.1| protein chain release factor A [Pelotomaculum thermopropionicum SI] gi|189039982|sp|A5CYC3|RF1_PELTS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146275262|dbj|BAF61011.1| protein chain release factor A [Pelotomaculum thermopropionicum SI] Length = 349 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 118/301 (39%), Positives = 172/301 (57%), Gaps = 13/301 (4%) Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSND 116 +KEIQD + L++ +ED + Q D L K +E + LL + D + Sbjct: 54 VVKEIQDTIA----LMKEEPDEDLREMAQAELDELTEKKDNLENRLKMLLLPKDPNDEKN 109 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 LE+ AG GG E+ +A L RMY+R+AE++ ++TE L+ + + G K LI+G Sbjct: 110 VILEIRAGTGGEEAALFAADLFRMYSRYAERQGWRTEILDANYTDIGGFKEVISLIEGKG 169 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 Y +K E GVHR+ RI +S R HTS +++ V P ++ ++++I D RID + +S Sbjct: 170 VYSRMKFESGVHRVQRIPTTESGGRIHTSAATVAVLPEAEE-VDVQIDPDDLRIDVFCSS 228 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTT SAVRITHIPTG+VV Q E+SQHKNK +A +LRA+L L+ ++E Sbjct: 229 GHGGQSVNTTQSAVRITHIPTGIVVSMQDEKSQHKNKEKAMKVLRARL--LDRVQQEHQQ 286 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 I + K+ +G G +IR+Y P V D R + VLDGDLD+ + TL + Sbjct: 287 KIASTRKSMVGTGDRSERIRTYNF-PQNRVTDHRVGLTLHRLDSVLDGDLDEIID-TLIL 344 Query: 354 K 354 K Sbjct: 345 K 345 >gi|83591213|ref|YP_431222.1| peptide chain release factor 1 [Moorella thermoacetica ATCC 39073] gi|119361560|sp|Q2RFW0|RF1_MOOTA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83574127|gb|ABC20679.1| bacterial peptide chain release factor 1 (bRF-1) [Moorella thermoacetica ATCC 39073] Length = 356 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 99/240 (41%), Positives = 144/240 (60%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGAGG E+ +A L RMY R+AEK++++TE + H E G K + Sbjct: 106 DEKDIIMEIRAGAGGEEAALFAGDLFRMYQRYAEKKRWRTEIISSHPTELGGFKEIIFQV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ RI +S R HTS +++ V P ++ +++EI D R+D Sbjct: 166 EGQGVYSRLKFESGVHRVQRIPTTESGGRIHTSTATVAVLPEAEE-VDVEIKPEDLRVDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVRITH+PTG+VV CQ E+SQ KNK +A +LRA+L ++ +R Sbjct: 225 FCSSGPGGQSVNTTYSAVRITHLPTGLVVSCQDEKSQLKNKEKAMRVLRARLLDMARAER 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + E ++++G G +IR+Y P V D R + VL G+LD+ + A Sbjct: 285 E--GELAEERRSQVGSGDRSERIRTYNF-PQNRVTDHRIGLTLHHLDQVLAGELDEIIDA 341 >gi|241206502|ref|YP_002977598.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860392|gb|ACS58059.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 359 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A ++ +K E L +GE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRAEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P V D R N+ +++G++++ + Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALMA 345 >gi|190893591|ref|YP_001980133.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652] gi|190698870|gb|ACE92955.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652] Length = 351 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A ++ +K E L +GE G K Sbjct: 99 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIAT 158 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 159 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 217 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ Sbjct: 218 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 276 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P V D R N+ +++G++++ + Sbjct: 277 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 333 Query: 349 ATLA 352 A +A Sbjct: 334 ALMA 337 >gi|269114934|ref|YP_003302697.1| Peptide chain release factor 1 [Mycoplasma hominis] gi|268322559|emb|CAX37294.1| Peptide chain release factor 1 [Mycoplasma hominis ATCC 23114] Length = 359 Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 116/343 (33%), Positives = 186/343 (54%), Gaps = 24/343 (6%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL--ELALEEDDCS 83 L K DP+++ ++ + +E+ L K+ Q+ + L L E+ E D Sbjct: 19 LTEKLNDPNIYNDIKAYTRIAKEKSELQEIYDAFKKYQN--IEELYFLSKEILTNEKDQE 76 Query: 84 ILQ----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 +++ + + + +++ E + L E D D +E+ AGG E+ ++ L + Sbjct: 77 LIELAKNDIDNQMNQLQEIEEEIKELLLPQDENDKRDVIMEIRGAAGGDEANIFSGDLFK 136 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY ++AE + FK + ++ G G IKG + LK E+GVHR+ R+ ++ Sbjct: 137 MYQKYAEIKGFKIKIIDSTYGAAGGYSQIVFSIKGEKVFSQLKFERGVHRVQRVPATETQ 196 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ V P VD+ ++IEI D ++ +R+SGAGGQ VNTTDSAVRITH PTG+ Sbjct: 197 GRVHTSTATVTVLPEVDEDVKIEIRPEDIEVNVFRSSGAGGQSVNTTDSAVRITHKPTGL 256 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE-------IANIGESSKTEIGWGRQI 312 VV Q ERSQ +NK A +L+++LYELEL+KREE +A G+ S+ +I Sbjct: 257 VVTSQDERSQIQNKETALKVLKSRLYELELRKREEAESGLRKLAGTGDRSE-------KI 309 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P + D R TS V++G+LD ++A +A +K Sbjct: 310 RTYNY-PQDRITDHRIGF-STSLKVVMEGELDKIIEALIADEK 350 >gi|114766145|ref|ZP_01445149.1| peptide chain release factor 1 [Pelagibaca bermudensis HTCC2601] gi|114541605|gb|EAU44647.1| peptide chain release factor 1 [Roseovarius sp. HTCC2601] Length = 349 Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 106/256 (41%), Positives = 151/256 (58%), Gaps = 14/256 (5%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L AD+ A LE+ G GG E+ +A L RMY R+AE R ++ E +E E Sbjct: 90 QLALLPKDAADARPAMLEIRPGTGGEEAALFAGDLARMYQRYAEARGWRWEVIEEQPTEL 149 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G++ + I+G N + LK E GVHR+ R+ +S R HTS +++ V P ++++I+ Sbjct: 150 GGLRELVVRIEGDNVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEA-EAVDID 208 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RIDT RASGAGGQHVNTTDSAVRITHIPTG+VV E+SQH+N+ A N+LR Sbjct: 209 IAAADIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIVV-TSSEKSQHRNREIAMNVLRT 267 Query: 283 KLYELELQKREEI------ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +L++LE QK + A +G ++E +IR+Y P + D R + Sbjct: 268 RLFDLERQKAADARASDRKAQVGSGDRSE-----RIRTYNF-PQGRMTDHRIGLTLYRLE 321 Query: 337 DVLDGDLDDFMKATLA 352 +L GDLD+ + A A Sbjct: 322 QILAGDLDEIIDALTA 337 >gi|325921457|ref|ZP_08183312.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas gardneri ATCC 19865] gi|325548004|gb|EGD19003.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas gardneri ATCC 19865] Length = 361 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 98/239 (41%), Positives = 143/239 (59%), Gaps = 7/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY R+AE++ +K E GE G K + Sbjct: 107 DEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P DD EI I+ +D ++DT Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A L+A+L E E K Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK- 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347 A ++ K ++G G ++IR+Y P + D R + ++++GDLD + Sbjct: 286 -AAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALI 342 >gi|196013797|ref|XP_002116759.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens] gi|190580737|gb|EDV20818.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens] Length = 271 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 101/246 (41%), Positives = 154/246 (62%), Gaps = 9/246 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD ++A +E+ A GG E+ +A L +MY R+A R +K EAL H+ E G K A Sbjct: 6 EADDSNAIIEIRAATGGLEAALFAADLFQMYKRYASHRNWKFEALSFHENEVGGFKEAIA 65 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G +G +K E GVHR+ R+ +S+ R HTS +++ + P ++ I+I I+++D + Sbjct: 66 SIVGAGVFGEMKLESGVHRVQRVPITESDGRVHTSTATVAILPQPEE-IDIVINKNDIKF 124 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT+RA GAGGQHVNTTDSAVR+THIPTG++V Q+E+SQH+NKA+A +L+AKL++ + Q Sbjct: 125 DTFRAQGAGGQHVNTTDSAVRLTHIPTGMIVAVQEEKSQHRNKAKAIQILQAKLFDEQRQ 184 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 + + + + + +IG G +IR+Y Q + D R N+ D L G+ L+ Sbjct: 185 QNQ--TDRVHARRQQIGTGARSERIRTYNYQQ-DRITDHRINMSLYGIDDFLSGNESLNH 241 Query: 346 FMKATL 351 M + L Sbjct: 242 LMSSLL 247 >gi|227524270|ref|ZP_03954319.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290] gi|227088501|gb|EEI23813.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290] Length = 361 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 121/350 (34%), Positives = 190/350 (54%), Gaps = 17/350 (4%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD AV R LN DP + + L +E L + ++ KE+ +L D Sbjct: 4 IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63 Query: 69 NLILLELALEEDDCS--ILQETSD-NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAG 124 + +L +++ D + E SD Q+ KLE + K LL + D + +E+H Sbjct: 64 DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVM--LLPKDPNDEKNIIMEIHGA 121 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E +A L MY+++AE++ +K E ++ + E G K L+I G Y LK E Sbjct: 122 AGGDEGSLFAVDLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYE 181 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +++ V P +D ++I+I D R+D YR+SGAGGQH+N Sbjct: 182 NGAHRVQRVPVTESAGRVHTSTATVGVMPEEED-VDIDIDPKDIRVDVYRSSGAGGQHIN 240 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ Q+ ++ N K+ Sbjct: 241 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNA--ERKS 298 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IG G +IR+Y P V D R + +++G+LDD + A + Sbjct: 299 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALI 347 >gi|86742401|ref|YP_482801.1| peptide chain release factor 1 [Frankia sp. CcI3] gi|119361540|sp|Q2J6M0|RF1_FRASC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|86569263|gb|ABD13072.1| bacterial peptide chain release factor 1 (bRF-1) [Frankia sp. CcI3] Length = 357 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 148/242 (61%), Gaps = 10/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ DA LEV AGAGG ES +A LLRMY R+AE+R +KTE L+ + + G + ++ + Sbjct: 100 DARDAILEVKAGAGGEESALFAGDLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAV 159 Query: 173 K-----GPN--AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K GP YG L+ E GVHR+ R+ +S R HTS + + V P ++ +++EI Sbjct: 160 KARGPAGPGDGVYGRLRFEGGVHRVQRVPVTESAGRIHTSAAGVLVLPEAEE-VDVEIDP 218 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID +R+SG GGQ VNTTDSAVRITHIPTGVVV CQ E+SQ +NK A +LRA+L Sbjct: 219 NDLRIDVFRSSGPGGQSVNTTDSAVRITHIPTGVVVSCQNEKSQLQNKESALRILRARLL 278 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +K E A++ +S+ + ++R+Y + D R + + VLDG+LD Sbjct: 279 GAAREKAESEASLARASQVRTVDRSERVRTYNFA-ENRISDHRVGYKAHNLDQVLDGELD 337 Query: 345 DF 346 + Sbjct: 338 EV 339 >gi|148555445|ref|YP_001263027.1| peptide chain release factor 1 [Sphingomonas wittichii RW1] gi|166223608|sp|A5V9C3|RF1_SPHWW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148500635|gb|ABQ68889.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingomonas wittichii RW1] Length = 360 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 105/246 (42%), Positives = 148/246 (60%), Gaps = 10/246 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG E+ +A L RMY R+AE R ++ E + + G K Sbjct: 108 ADERSAMLEIRAGTGGDEAALFAGDLFRMYQRYAEDRGWRVELISASAADLGGYKEVVAS 167 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +S R HTS +++ V P ++ +++ I + D RID Sbjct: 168 VTGAGVFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEE-VDVHIDDKDLRID 226 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQHKNKA+A +LR +LYE+E Sbjct: 227 VYRSSGPGGQSVNTTDSAVRITHLPTGLVVIQQDEKSQHKNKAKALKVLRTRLYEME--- 283 Query: 292 REEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346 RE +A+ + K+ +G G +IR+Y P V D R N+ S++L+G LDD Sbjct: 284 RERLASERAGARKSMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLSEILEGPGLDDL 342 Query: 347 MKATLA 352 + A +A Sbjct: 343 VGALIA 348 >gi|325285304|ref|YP_004261094.1| peptide chain release factor 1 [Cellulophaga lytica DSM 7489] gi|324320758|gb|ADY28223.1| Peptide chain release factor 1 [Cellulophaga lytica DSM 7489] Length = 358 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 94/232 (40%), Positives = 142/232 (61%), Gaps = 3/232 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +EV AG GG E+ +A L RMYT++ E + +KT +++ DG G K + Sbjct: 106 DSKNVVVEVRAGTGGDEASIFAGDLFRMYTKYCESKGWKTNVIDLSDGTSGGYKEIQFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +++ V P +D +++I D RID Sbjct: 166 TGDEVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAED-FDVQIDPKDVRIDF 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH+PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K+ Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHVPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYDLELAKK 284 Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +E +S+ G +IR+Y P V D R + ++++GD+ Sbjct: 285 QEEDAAKRNSQVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDI 335 >gi|294678208|ref|YP_003578823.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003] gi|294477028|gb|ADE86416.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003] Length = 351 Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 105/245 (42%), Positives = 153/245 (62%), Gaps = 10/245 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ G GG E+ +A+ L RMY R AEK ++ E LE E G+K A Sbjct: 101 ADARPAILEIRPGTGGEEAALFAHDLWRMYERHAEKMGWRFERLEFTATELGGVKEAMAR 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G + LK E GVHR+ R+ ++ R HTS +++ V P ++ ++I+I +D RID Sbjct: 161 IEGEGVFARLKYESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-VDIDIPAADIRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+PTG++V E+SQH+N+A A +LRA+LYE+E Sbjct: 220 TMRSSGAGGQHVNTTDSAVRITHLPTGIIV-TSSEKSQHQNRANAMAVLRARLYEIE--- 275 Query: 292 REEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 RE +A E+ ++++G G +IR+Y P + D R N+ + +L GDL + + Sbjct: 276 RERLATERAENRRSQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYALPQILAGDLGEVI 334 Query: 348 KATLA 352 A +A Sbjct: 335 DALVA 339 >gi|323249834|gb|EGA33733.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] Length = 281 Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 86/173 (49%), Positives = 121/173 (69%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIH 279 >gi|310816145|ref|YP_003964109.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25] gi|308754880|gb|ADO42809.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25] Length = 352 Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 122/335 (36%), Positives = 183/335 (54%), Gaps = 12/335 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R FL K + + E L RE L + + Q D E + D Sbjct: 13 RFQFLEAKMQS---GLSGAEIAALGREYSELKPVVDTLARYQALEADLASAEEWLADPDM 69 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140 + +E L+ E E + ++LL +A D A LE+ G GG E+ +A LLRM Sbjct: 70 RAFAEEELPRLRTAFAEAEIEMQKALLPRDAADGRPAMLEIRPGTGGDEASLFAADLLRM 129 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R++E + ++ E +E + E GIK + I+G + +K E GVHR+ R+ +S Sbjct: 130 YQRYSESKGWRFEIIEEAETELGGIKEVVVRIEGEGVFARMKYESGVHRVQRVPETESGG 189 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P + +++IEI+ D RIDT RASGAGGQHVNTTDSAVRITH+PTG++ Sbjct: 190 RIHTSAATVAVLPEAE-AVDIEINPGDIRIDTMRASGAGGQHVNTTDSAVRITHLPTGII 248 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V Q +SQH+N+ A ++LRA+LY++E + R + A + K ++G G +IR+Y Sbjct: 249 VTSSQ-KSQHRNRELAMDVLRARLYDME-RSRVDGARSAD-RKAQVGSGDRSERIRTYNF 305 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P + D R N+ +L GDLD+ + A +A Sbjct: 306 -PQGRMTDHRINMTLYRLDQILQGDLDEIVDALVA 339 >gi|326561958|gb|EGE12292.1| peptide chain release factor 1 [Moraxella catarrhalis 103P14B1] Length = 319 Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 131/209 (62%), Gaps = 8/209 (3%) Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D ND A+LE+ AG GG E+ ++ L RMY ++ + + ++ E L ++GE G K Sbjct: 104 DPNDKATAFLEIRAGTGGDEAAIFSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEII 163 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + G YG LK E G HR+ R+ +S R HTS ++ V P V+ +EI+ SD R Sbjct: 164 ARVSGIGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLR 223 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDTYR+SGAGGQHVNTTDSAVRITHIPTGVV +CQQERSQH NK +A ML A++ + ++ Sbjct: 224 IDTYRSSGAGGQHVNTTDSAVRITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKV 283 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSY 315 Q +I + + +G G +IR+Y Sbjct: 284 QA--QIDATSDMRRNLVGSGDRSERIRTY 310 >gi|189499090|ref|YP_001958560.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1] gi|189494531|gb|ACE03079.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1] Length = 357 Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 99/241 (41%), Positives = 151/241 (62%), Gaps = 4/241 (1%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSAT 169 EADS + +E+ AG GG E+ +A LLRMY ++AE++ +K + +E ++ G K A Sbjct: 104 EADSRNVIIEIRAGTGGDEAALFATDLLRMYQKFAERKGWKCDMMEFNEASIPGACKEAI 163 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 L I G + Y +K E GVHR+ R+ ++ R HTS +S+ V P +D ++IEI + D + Sbjct: 164 LSISGHDVYATMKFESGVHRVQRVPETETQGRIHTSAASVAVLPEAED-VDIEIRKDDLQ 222 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +DT+R+ G GGQ+VN ++AVRITH P+G+VV CQ+ERSQ +N+ +A MLRAKLY+ +L Sbjct: 223 LDTFRSGGKGGQNVNKVETAVRITHTPSGIVVACQEERSQLQNRERAMKMLRAKLYDQQL 282 Query: 290 -QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +K E A++ S T +IR+Y P V D R + +L+G+LDD ++ Sbjct: 283 AEKNRERADLRRSMVTTGDRSAKIRTYNF-PQSRVTDHRIGYTSHALPQILEGNLDDIIE 341 Query: 349 A 349 A Sbjct: 342 A 342 >gi|295100871|emb|CBK98416.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium prausnitzii L2-6] Length = 361 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 119/339 (35%), Positives = 185/339 (54%), Gaps = 15/339 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRE---RQHLDNAISFIKEIQDRLCDNLILLE--L 75 +R L+ + P + + + LM+E Q + +A + QD L LLE Sbjct: 13 RRFEELSIRLNQPETAADPAQLRRLMQEYHEAQPVVDAYHALTTAQDHLAQAKALLEGDE 72 Query: 76 ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133 L+ D + QE S+ Q + E+E LL +A D +E+ AGAGG E+ + Sbjct: 73 PLDADFKAMVQQELSEKSQDVA-ELENNLKILLLPKDANDEKSVIMEIRAGAGGEEAALF 131 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+ L+RMYT + + R ++ E L +++ E G K A + G AY LK E GVHR+ R+ Sbjct: 132 AHSLVRMYTMYVQSRGWEMELLNLNETELGGTKEAVFAVNGRGAYNRLKYESGVHRVQRV 191 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P ++ ++ + D RIDT+R+SGAGGQH+N T SA+R+T Sbjct: 192 PETETQGRIHTSTATVAVMPQAEE-VDFALDMKDLRIDTFRSSGAGGQHINKTSSAIRVT 250 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG VV+CQ ERSQ +NK +A +LR++L L +++E+ I ++G G Sbjct: 251 HIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINADRAGQVGTGDRSE 308 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P D R + + ++DGDLDD + A Sbjct: 309 KIRTYNF-PQDRCTDHRIGLTVHNLDKIMDGDLDDIIDA 346 >gi|149369846|ref|ZP_01889697.1| peptide chain release factor 1 [unidentified eubacterium SCB49] gi|149356337|gb|EDM44893.1| peptide chain release factor 1 [unidentified eubacterium SCB49] Length = 358 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 106/302 (35%), Positives = 177/302 (58%), Gaps = 13/302 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 LM++R+ A I E ++ L D + ++E+A + D E N+ ++ E+ Sbjct: 44 LMKKREAYIMATEHIAEAEEILADGSDADMVEMAKMQMD-----EAKSNIAVLEEEI--- 95 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + + D+ +A +E+ AG GG E+ +A L RMYT++ E + +KT ++ +G Sbjct: 96 KLMLIPKDPEDAKNAVMEIKAGTGGDEASIFAGDLHRMYTKYCESKGWKTSVVDFSEGTS 155 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K+ + ++G + YG LK E GVHR+ R+ ++ R HTS +++ V+P ++ ++ Sbjct: 156 GGYKAIQMEVEGDDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVFPEAEE-FDVH 214 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I D RID + +SG GGQ VNTT SAVR+TH+PTG+V QCQ ++SQHKNK +A+ +LR+ Sbjct: 215 IEMKDVRIDYFCSSGPGGQSVNTTYSAVRLTHVPTGLVAQCQDQKSQHKNKEKAFKVLRS 274 Query: 283 KLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +LY+LEL K++ + S+ G +IR+Y + V D R N+ S+++DG Sbjct: 275 RLYDLELAKKQAEDALKRGSQVTSGDRSAKIRTYNYSQGR-VTDHRINLTLYDLSNIIDG 333 Query: 342 DL 343 D+ Sbjct: 334 DI 335 >gi|254511294|ref|ZP_05123361.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11] gi|221535005|gb|EEE37993.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11] Length = 357 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 167/293 (56%), Gaps = 10/293 (3%) Query: 65 RLCDNLILLELALEEDDCSIL-QETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVH 122 +L +L E L + D L +E LQ E E+ Q L AD+ A LE+ Sbjct: 58 QLVADLAEAEAMLSDPDMKELAEEEIPQLQARIPEAEHALQLALLPRDAADARPAMLEIR 117 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+ +A LLRMY R+AE R ++ E +E + GIK IKG N + +K Sbjct: 118 PGTGGDEAALFAGDLLRMYQRYAEGRGWQFEIIEEQASDLGGIKEVVAHIKGDNVFARMK 177 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S R HTS +++ V P +D ++I+I +D RIDT R+SGAGGQH Sbjct: 178 YESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIQIDANDIRIDTMRSSGAGGQH 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+P+G+VV E+SQH+N+ A +L+ +LY+LE Q+ + + +S Sbjct: 237 VNTTDSAVRITHLPSGIVV-TSSEKSQHRNREIAMQVLKTRLYDLERQRIDSARSADRAS 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 ++G G +IR+Y P + D R N+ V+ GDLD+ + A A Sbjct: 296 --QVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIDALTA 345 >gi|15639045|ref|NP_218491.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum str. Nichols] gi|6093956|sp|O83090|RF1_TREPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|3322309|gb|AAC65047.1| peptide chain release factor 1 (prfA) [Treponema pallidum subsp. pallidum str. Nichols] Length = 351 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 119/338 (35%), Positives = 185/338 (54%), Gaps = 27/338 (7%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + E+P L+ + + MR+ +L S + E DR +L E LE+ I Sbjct: 15 LQQEVENPSLFSSTQSYRERMRDHAYL----SRLMEEYDRY----LLTEKQLEDAHVLIQ 66 Query: 86 QETSDNLQRI----------KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133 E+ + + + L K+ ++LL + +E+ G GG E+ + Sbjct: 67 DESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDSLQEKNIIMEIRGGTGGDEAALF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYT +AE ++++ E L + + E G K T I G + YG L+ E GVHR+ R+ Sbjct: 127 AADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +++ R HTS ++ V P ++++ E++I D R+D RASG GGQ VNTTDSAVR+T Sbjct: 187 PSTEASGRIHTSAVTVAVLPEMEET-EVDIRAEDVRVDVMRASGPGGQCVNTTDSAVRLT 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VV CQ E+SQ KNKA+A +LR+++Y+LE KR ++A E K+++G G Sbjct: 246 HLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKR-QVARARE-RKSQVGSGDRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R + V+ G LDD ++ Sbjct: 304 RIRTYNF-PQNRVTDHRVRVTLYKLDAVMQGALDDIIE 340 >gi|269837927|ref|YP_003320155.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM 20745] gi|269787190|gb|ACZ39333.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM 20745] Length = 361 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 99/241 (41%), Positives = 155/241 (64%), Gaps = 11/241 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +A L RMY+++AEKR +K + + ++ G K + Sbjct: 108 DEKNVIVEIRAGTGGEEAALFAADLFRMYSQYAEKRGWKIDVMSANETGIGGFKEIIFEV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS +++ V P ++ ++I+I+E D RID Sbjct: 168 RGRGAYSELKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEAEE-VDIQINEEDLRIDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R++G GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KN+A+A +LRA+LY+LE Q+R Sbjct: 227 FRSTGHGGQSVNTTDSAVRITHLPTGLVVTCQDEKSQIKNRAKAMAVLRARLYDLE-QRR 285 Query: 293 --EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 EE + + ++++G G +IR+Y P V D R + + ++L+G++D F+ Sbjct: 286 LHEERSGM---RRSQVGTGERAEKIRTYNF-PQDRVTDHRLKLSLGNLPEILNGEIDTFI 341 Query: 348 K 348 + Sbjct: 342 R 342 >gi|160872697|ref|ZP_02062829.1| peptide chain release factor 1 [Rickettsiella grylli] gi|159121496|gb|EDP46834.1| peptide chain release factor 1 [Rickettsiella grylli] Length = 363 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 95/240 (39%), Positives = 146/240 (60%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ A AGG E+ +A L RMY+R+AE + + E + + E+ G K I Sbjct: 109 DDRNVFLEIRAAAGGDEAAIFAGDLFRMYSRYAESQHWHVEIIHRNPSEQGGYKEIIARI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ ++ R HTS ++ + P ++ +I + SD +IDT Sbjct: 169 SGTKVYAHLKFESGAHRVQRVPETEAQGRVHTSTCTVAILPEIESMDDITLHPSDLKIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHV TDSA+RITH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL L QK Sbjct: 229 FRASGAGGQHVQKTDSAIRITHLPSGLVVECQDERSQHKNRARAMSLLQAKL--LAAQKA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ E+ + +G G +IR+Y P + D R N+ SD+++G L+ +++ Sbjct: 287 KQRREEAETRRDLVGTGDRSERIRTYNF-PQGRLTDHRINLTLYQLSDIMEGHLEPVIQS 345 >gi|329113396|ref|ZP_08242177.1| Peptide chain release factor 1 [Acetobacter pomorum DM001] gi|326697221|gb|EGE48881.1| Peptide chain release factor 1 [Acetobacter pomorum DM001] Length = 352 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 97/241 (40%), Positives = 148/241 (61%), Gaps = 7/241 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LEV AGG E+ +A L MY R+A+ ++ ++ + E G++ Sbjct: 101 ADARSAILEVRPAAGGDEAALFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAE 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ +S R HTS ++ V P +D +++E++E+D R+D Sbjct: 161 INGKGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAED-VDVEVNETDLRVD 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +RASGAGGQHVN T+SAVR+TH+P+G+VV Q+E+SQHKN+A+A +LRA+LYE E + Sbjct: 220 VFRASGAGGQHVNKTESAVRLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLYERE--R 277 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + AN ++++G G +IR+Y P V D R N+ V+ G+LD+F+ Sbjct: 278 AQAHANRAADRRSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLYKIDRVMLGELDEFVD 336 Query: 349 A 349 A Sbjct: 337 A 337 >gi|254488030|ref|ZP_05101235.1| peptide chain release factor 1 [Roseobacter sp. GAI101] gi|214044899|gb|EEB85537.1| peptide chain release factor 1 [Roseobacter sp. GAI101] Length = 371 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 109/269 (40%), Positives = 154/269 (57%), Gaps = 18/269 (6%) Query: 94 RIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 R+K E+ Q L AD+ A LE+ G GG E+ +A LLRMY R+AE + Sbjct: 99 RLKAEIPKAEASLQLALLPKDAADTKPAMLEIRPGTGGDEAALFAADLLRMYQRYAEAQG 158 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K + +E E G+K IKG N + LK E GVHR+ R+ +S R HTS +++ Sbjct: 159 WKFDLIEEQLTELGGVKEVVAHIKGQNVFARLKYESGVHRVQRVPSTESGGRIHTSAATV 218 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D ++I + +D RIDT R+SGAGGQHVNTTDSAVRITHIPTG+VV E+SQ Sbjct: 219 AVLPEAED-VDIHVDPNDLRIDTMRSSGAGGQHVNTTDSAVRITHIPTGIVV-TSSEKSQ 276 Query: 270 HKNKAQAWNMLRAKLYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 H+N+ A +L+A+LY+ E Q+ + A +G ++E +IR+Y P + Sbjct: 277 HRNREIAMQVLKARLYDAERQRVDSERSADRAAQVGSGDRSE-----RIRTYNF-PQGRM 330 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R N+ +L GDLD+ + A A Sbjct: 331 TDHRINLTLYRLDAILQGDLDEIIDALTA 359 >gi|145348023|ref|XP_001418457.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578686|gb|ABO96750.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 373 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 108/251 (43%), Positives = 155/251 (61%), Gaps = 13/251 (5%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 +AD A LEV AGAGG E+ +A L RMY A K ++ + L + + + G++ A+ Sbjct: 122 DADDRGAILEVRAGAGGDEAALFAAELFRMYALHARKSGWRFDTLNVSETDGKGVREASA 181 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G +G LK E GVHR+ R+ ++ R HTS +SI V P ++ +E++I E D RI Sbjct: 182 EILGKGVFGRLKFESGVHRVQRVPETETQGRVHTSTASIAVLPHAEE-VEMDIKEEDVRI 240 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTT+SAVR+TH PTG+ V Q ERSQHKNKA+A+++L+A+LY+LE + Sbjct: 241 DTMRASGAGGQHVNTTNSAVRLTHAPTGIQVVIQDERSQHKNKAKAFSVLKARLYDLERE 300 Query: 291 K----REEIAN--IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 K R E+ + IG ++E +IR+Y + VKD R + + ++DG L Sbjct: 301 KMAKERSELRSSLIGTGDRSE-----RIRTYNFAQGR-VKDHRVEGTISDVNALMDGFLL 354 Query: 345 DFMKATLAIKK 355 D + L K+ Sbjct: 355 DEITEKLKRKR 365 >gi|77920283|ref|YP_358098.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380] gi|119361572|sp|Q3A129|RF1_PELCD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|77546366|gb|ABA89928.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter carbinolicus DSM 2380] Length = 356 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 94/239 (39%), Positives = 144/239 (60%), Gaps = 7/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMY+R+AE + +K E + + D E G K +I Sbjct: 106 DDKNVILEIRAGTGGDEAALFAGDLFRMYSRFAEGQGWKVETMSVSDSEAGGFKEIIAMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ ++ R HTS ++ V P +D ++++I +D RID Sbjct: 166 SGNRVYSQLKYESGTHRVQRVPETEAQGRIHTSACTVAVLPEAED-VDVDIDPTDLRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN T+SAVRITH+PTGVVV CQ E+SQHKNKA+A +L++++ + + + Sbjct: 225 YRASGAGGQHVNKTESAVRITHVPTGVVVSCQDEKSQHKNKAKAMKVLKSRILDQVMADQ 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + A + K+++G G ++IR+Y P D R + ++ G+L + ++ Sbjct: 285 Q--AQMAADRKSQVGSGDRSQRIRTYNF-PQGRCTDHRIGLTLYRLEGIMQGNLSELVE 340 >gi|296170240|ref|ZP_06851833.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895116|gb|EFG74834.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 357 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 128/337 (37%), Positives = 182/337 (54%), Gaps = 11/337 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP L N EA+ R L ++ ++++ D ELA DD S Sbjct: 18 LEQRLADPDLHSNPAEARKAGRRFARLAPIVATYRKLESARGDLETARELAA--DDESFA 75 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E ++ R+ E++ + + L + D++D LEV +G GG ES +A L RMY R+ Sbjct: 76 DEVTELAARVA-ELDTQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIRY 134 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRISPYDSN 199 AE+ + L+ + G K ATL I KG +A G W +K E GVHR+ R+ +S Sbjct: 135 AERHGWNVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEGGVHRVQRVPVTESQ 194 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS + + VYP ++ E+ I ESD RID YR+SG GGQ VNTTDSAVRITH+PTG+ Sbjct: 195 GRVHTSAAGVLVYPEPEEVGEVHIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGI 254 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318 VV CQ ERSQ +NKA+A +L A+L + ++ A+ +S+ + +IR+Y Sbjct: 255 VVTCQNERSQLQNKARALQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRTYNF- 313 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P + D R + + VLDGDLD A A K Sbjct: 314 PENRITDHRIGYKAHNLDQVLDGDLDAMFDALGAADK 350 >gi|294085498|ref|YP_003552258.1| protein chain release factor A [Candidatus Puniceispirillum marinum IMCC1322] gi|292665073|gb|ADE40174.1| Protein chain release factor A [Candidatus Puniceispirillum marinum IMCC1322] Length = 358 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 103/244 (42%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A LEV AG GG E+ +A+ L MY R++ K +K E +E+ + G K AT I Sbjct: 108 DARNAILEVRAGTGGDEAALFASDLFGMYQRFSAKYGWKFEVMEVSETGIGGYKEATATI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + + LK E GVHR+ R+ ++ R HTS +++ V P +D +++E+ ESD RID Sbjct: 168 TGSDVFARLKFESGVHRVQRVPETETGGRIHTSAATVAVLPEAED-VDVEVVESDLRIDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVRITH+PTG+VV Q E+SQHKN+A+A +LRA+LY+ E + Sbjct: 227 FRASGPGGQSVNTTDSAVRITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARV 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 + A K ++G G +IR+Y P V D R N+ V+ G+ LD+ + Sbjct: 287 Q--AERAADRKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVIAGEALDEVID 343 Query: 349 ATLA 352 A ++ Sbjct: 344 ALIS 347 >gi|210634612|ref|ZP_03298189.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279] gi|210158740|gb|EEA89711.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279] Length = 355 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 124/326 (38%), Positives = 182/326 (55%), Gaps = 16/326 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL---ALEEDDC 82 L K DP + ++ E L +E H + + +E L D E+ A + D+ Sbjct: 15 LEKKLSDPSIASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIEAAKEMLREATDADEK 74 Query: 83 SILQ-ETSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139 +LQ E S+N ++ +LE + K L+ G+ D D +E+ + AGG E+ +A L + Sbjct: 75 EMLQMEISENEAKLPQLEEDIKIM--LIPGDPMDEKDTIVEIRSAAGGDEAAIFAGDLFK 132 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ E +K+K E L+ + G KS + G Y +K E GVHR+ R+ +S Sbjct: 133 MYQRFIESKKWKMEVLDSSPSDAGGFKSIEFKVTGDRVYSVMKYESGVHRVQRVPKTESQ 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R TS +++ V P D+ I+++I++SD RIDTY ASG GGQ VNTT SAVRITH+PT Sbjct: 193 GRIQTSTATVAVLPEADE-IDVQINQSDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNT 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VVQ Q++RSQ +N+ MLRA+LYE+EL+K++ A +G +IG G +IR+Y Sbjct: 252 VVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQ--AELGAERSAQIGHGNRSEKIRTYN 309 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD 342 QP V D R T + VL GD Sbjct: 310 -QPQDRVTDHRIGFNSTY-NGVLLGD 333 >gi|111225294|ref|YP_716088.1| peptide chain release factor 1 [Frankia alni ACN14a] gi|111152826|emb|CAJ64570.1| peptide chain release factor RF-1 [Frankia alni ACN14a] Length = 362 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 101/241 (41%), Positives = 149/241 (61%), Gaps = 9/241 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ DA LEV AGAGG ES +A LLRMY R+AE+R +KTE L+ + + G + ++ + Sbjct: 106 DARDAILEVKAGAGGEESALFAGDLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAV 165 Query: 173 K------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 K G YG L+ E GVHR+ R+ +S R HTS + + V P ++ +++EI + Sbjct: 166 KARGSAAGDGVYGRLRFEGGVHRVQRVPVTESAGRIHTSAAGVLVLPEAEE-VDVEIDPN 224 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK A +LRA+L Sbjct: 225 DLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGLVVSCQNEKSQLQNKESALRILRARLLG 284 Query: 287 LELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + +K E A++ +S+ + ++R+Y + + D R + + VLDG+LD+ Sbjct: 285 VAREKAEAEASLARASQVRTVDRSERVRTYNFAENR-ISDHRVGYKAHNLDQVLDGELDE 343 Query: 346 F 346 Sbjct: 344 V 344 >gi|229087819|ref|ZP_04219935.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44] gi|228695494|gb|EEL48363.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44] Length = 358 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 124/350 (35%), Positives = 187/350 (53%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D AV+ R LN DP + + + + +E+ + + + +E +D + Sbjct: 1 MNDVLDRLQAVEDRYEKLNELLSDPEIISDSNKLREYSKEQSDIQDTVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ + +++E L+ E E + +L D ND +EV Sbjct: 61 LRDAKAMLEEKLDAEMRDMVKEEVSELE--GQEKELSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|229020548|ref|ZP_04177293.1| Peptide chain release factor 1 [Bacillus cereus AH1273] gi|229026769|ref|ZP_04183101.1| Peptide chain release factor 1 [Bacillus cereus AH1272] gi|228734492|gb|EEL85154.1| Peptide chain release factor 1 [Bacillus cereus AH1272] gi|228740768|gb|EEL91021.1| Peptide chain release factor 1 [Bacillus cereus AH1273] Length = 358 Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 124/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + G+ D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNGVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ + +++E L+ E + +L D ND +EV Sbjct: 61 LRDAKAMLEDKLDAEMREMVKEEVSELE--GQEKTLSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEINIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|46581318|ref|YP_012126.1| peptide chain release factor 1 [Desulfovibrio vulgaris str. Hildenborough] gi|120601501|ref|YP_965901.1| peptide chain release factor 1 [Desulfovibrio vulgaris DP4] gi|61214640|sp|Q727E1|RF1_DESVH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223554|sp|A1VAK8|RF1_DESVV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46450740|gb|AAS97386.1| peptide chain release factor 1 [Desulfovibrio vulgaris str. Hildenborough] gi|120561730|gb|ABM27474.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio vulgaris DP4] gi|311234981|gb|ADP87835.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1] Length = 357 Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 143/240 (59%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMYTR+AE +K E L D + G K LI Sbjct: 105 DDKNILLEIRAGTGGEEASLFAADLFRMYTRYAEIMGWKVEVLSASDSDTGGYKEIIALI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ ++ R HTS +++ V P ++ ++++I D RID Sbjct: 165 AGDKVYSRLKYESGTHRVQRVPATEAQGRIHTSAATVAVMPEAEE-VDVDIRPDDLRIDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN T+SAVRITH+PTG+VV CQ E+SQHKNKA+A +L +++ + E ++ Sbjct: 224 YRASGAGGQHVNKTESAVRITHLPTGIVVACQDEKSQHKNKAKAMKVLISRVLQAEQERA 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + I ++ + +G G +IR+Y P + D R N+ S V++G+L + A Sbjct: 284 HSV--IADARRALVGSGDRSERIRTYNY-PQSRITDHRINLTLYSLDKVMEGELAPLVDA 340 >gi|219850039|ref|YP_002464472.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485] gi|254790871|sp|B8G7K1|RF1_CHLAD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219544298|gb|ACL26036.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485] Length = 361 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 129/351 (36%), Positives = 188/351 (53%), Gaps = 18/351 (5%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD AV QR L P + NV + RE++ L++ ++ +E Q + Sbjct: 1 MFDKLEAVAQRYDELTQLMAQPEVATNVTLLQQYAREQRELEDIVTTYREYQA-AQRAIA 59 Query: 72 LLELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 E L+E+D ++ QE D QR +L +Q + LL DS D +E+ G G Sbjct: 60 EAEAMLDENDPELRALAQEELDT-QRKRLATLEEQLKVLLLPRDPNDSKDVIMEIRQGEG 118 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMYTR+AE R +K E + + GIK I G AY LK E G Sbjct: 119 GDEAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +++ V P V+++ EIEI D RID +R++G GGQ VNTT Sbjct: 179 VHRVQRVPATEARGRIHTSTATVAVLPEVEET-EIEIKPEDLRIDVFRSAGHGGQGVNTT 237 Query: 247 DSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 DSAVRI + P +VV CQ RSQ +N+ +A +LRA+LY E +KR+ IG S Sbjct: 238 DSAVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQR--EIGASRL 295 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++G G +IR+Y P + D R ++ VLDG+LD ++A + Sbjct: 296 AQVGSGERAEKIRTYNF-PQDRITDHRIGQNFSNLPAVLDGELDKIIEALI 345 >gi|108800851|ref|YP_641048.1| peptide chain release factor 1 [Mycobacterium sp. MCS] gi|119869991|ref|YP_939943.1| peptide chain release factor 1 [Mycobacterium sp. KMS] gi|126436449|ref|YP_001072140.1| peptide chain release factor 1 [Mycobacterium sp. JLS] gi|119361564|sp|Q1B542|RF1_MYCSS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223572|sp|A3Q3C2|RF1_MYCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223573|sp|A1UJZ5|RF1_MYCSK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|108771270|gb|ABG09992.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. MCS] gi|119696080|gb|ABL93153.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. KMS] gi|126236249|gb|ABN99649.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. JLS] Length = 357 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 133/344 (38%), Positives = 180/344 (52%), Gaps = 25/344 (7%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCS 83 L + DP L + +A+ R L ++ ++++ D LE A E DD S Sbjct: 18 LERQLADPALHADAGKARKAGRRFAQLAPIVATYRKLEAARGD----LEAARELGADDAS 73 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTESQDWANML 137 E + LE Q E+ LS D++D LEV +G GG ES +A L Sbjct: 74 FAAEVPE------LEATVDQLETQLSDLLAPRDPHDADDIVLEVKSGEGGEESALFAADL 127 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVR 192 RMY R+AE+ + L+ + G K ATL I KG +A G W LK E GVHR+ R Sbjct: 128 ARMYIRYAERHGWSVTILDETTSDLGGYKDATLSIRSKGDSADGVWSRLKFEGGVHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS + + VYP ++ +++I ESD RID YR+SG GGQ VNTTDSAVRI Sbjct: 188 VPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAVRI 247 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQ 311 TH+PTG+VV CQ ERSQ +NKA+A +L A+L L E Q + + S + + Sbjct: 248 THLPTGIVVTCQNERSQLQNKARAMQVLAARLQSLAEEQASADASADRASQIRTVDRSER 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N + + VLDGDLD A A K Sbjct: 308 IRTYNF-PENRIADHRINFKAHNLDQVLDGDLDPLFDALAAADK 350 >gi|331090678|ref|ZP_08339527.1| peptide chain release factor 1 [Lachnospiraceae bacterium 2_1_46FAA] gi|330400092|gb|EGG79743.1| peptide chain release factor 1 [Lachnospiraceae bacterium 2_1_46FAA] Length = 356 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 116/349 (33%), Positives = 202/349 (57%), Gaps = 14/349 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCD 68 +FD ++ + R + + ++P + + + LM+E+ L +A + K + + D Sbjct: 1 MFDRLEDLIIRFEEIMGELQEPDVANDQNRFRKLMKEQADLTPIVDAYNEYKSAKQAIAD 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126 + +LE+ +E+ + +E S + +R++ E+E++ LL + D + +E+ AGAG Sbjct: 61 SEEMLEMESDEEMRELAKEELSASKKRVE-ELEHELKILLLPKDPNDDKNIMVEIRAGAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ES +A + RMY +AE +++KTE + ++ G K ++ G + Y +K E G Sbjct: 120 GDESALFAAEVYRMYVHYAESKRWKTELISFNENGIGGFKEVVFMVSGQSVYSRMKYESG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ V P ++ +++ I + D RID RASG GGQ VNTT Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIDDKDIRIDVMRASGNGGQCVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K++ E+ +++I Sbjct: 239 DSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAE--AEARRSQI 296 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G G +IR+Y P V + R + ++++GDLD+ + +A Sbjct: 297 GTGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDNIMNGDLDEIIDPLIA 344 >gi|189025285|ref|YP_001933057.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum SS14] gi|238689313|sp|B2S1Z9|RF1_TREPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189017860|gb|ACD70478.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum SS14] gi|291059466|gb|ADD72201.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum str. Chicago] Length = 351 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 119/338 (35%), Positives = 185/338 (54%), Gaps = 27/338 (7%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + E+P L+ + + MR+ +L S + E DR +L E LE+ I Sbjct: 15 LQQEVENPSLFSSTQSYRERMRDHAYL----SRLMEEYDRY----LLTEKQLEDAHVLIQ 66 Query: 86 QETSDNLQRI----------KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133 E+ + + + L K+ ++LL + +E+ G GG E+ + Sbjct: 67 DESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDPLQEKNIIMEIRGGTGGDEAALF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYT +AE ++++ E L + + E G K T I G + YG L+ E GVHR+ R+ Sbjct: 127 AADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +++ R HTS ++ V P ++++ E++I D R+D RASG GGQ VNTTDSAVR+T Sbjct: 187 PSTEASGRIHTSAVTVAVLPEMEET-EVDIRAEDVRVDVMRASGPGGQCVNTTDSAVRLT 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VV CQ E+SQ KNKA+A +LR+++Y+LE KR ++A E K+++G G Sbjct: 246 HLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKR-QVARARE-RKSQVGSGDRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R + V+ G LDD ++ Sbjct: 304 RIRTYNF-PQNRVTDHRVRVTLYKLDAVMQGALDDIIE 340 >gi|157273346|gb|ABV27245.1| peptide chain release factor 1 [Candidatus Chloracidobacterium thermophilum] Length = 357 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 121/347 (34%), Positives = 188/347 (54%), Gaps = 20/347 (5%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD A++ + L + DP + + L ++ L + +E Q + Sbjct: 1 MFDKLKALEEKYEALTAQLSDPEVVADAARYAKLAKQHSELTEVVEKFREYQTIEANLAS 60 Query: 72 LLELALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSND---AYLEVHA 123 EL E +D ++ + + QR + ++E E LL+ + D ND LE+ A Sbjct: 61 ARELLNEAEDAEMVALAREEIALLEKQRAQCQLE---LEQLLTPK-DPNDRKNVLLEIRA 116 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +A LLRMY R+AE+R ++ + L+ E G+K +LI+G Y LK Sbjct: 117 GTGGNEASLFAGELLRMYLRYAERRGWRVQILDESLSEVGGLKEGIVLIEGTGVYSRLKH 176 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ +S R HTS ++ V P ++ ++IEI D RIDT+ +SG GGQ V Sbjct: 177 ESGVHRVQRVPVTESAGRIHTSTVTVAVLPEAEE-VDIEIDPKDVRIDTFCSSGPGGQSV 235 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVR+TH+PTG+VV Q E+SQ KN+ +A+ +LRA+L ELE QK+ E I + Sbjct: 236 NTTYSAVRLTHLPTGLVVSIQDEKSQIKNREKAFRILRARLLELERQKQHE--AIAGERR 293 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++G G +IR+Y + + V D R + ++DG+LD + Sbjct: 294 AQVGTGERSEKIRTYNFKENR-VTDHRIGLTLHQLDTIMDGELDGLI 339 >gi|325914250|ref|ZP_08176600.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas vesicatoria ATCC 35937] gi|325539505|gb|EGD11151.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas vesicatoria ATCC 35937] Length = 361 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY R+AE++ +K E GE G K + Sbjct: 107 DDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P DD EI I+ +D ++DT Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDIEEIVINPADLKVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A L+A+L E E K Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK- 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348 A ++ K ++G G ++IR+Y P + D R + ++++GDLD + Sbjct: 286 -AAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIA 343 Query: 349 ATL 351 L Sbjct: 344 RLL 346 >gi|296393116|ref|YP_003658000.1| peptide subunit release factor 1 [Segniliparus rotundus DSM 44985] gi|296180263|gb|ADG97169.1| peptide chain release factor 1 [Segniliparus rotundus DSM 44985] Length = 354 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 103/244 (42%), Positives = 148/244 (60%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D LEV +GAGG ES +A L+RMYT++AE+R+++ E L + + + G+K AT+ I Sbjct: 101 DGDDVVLEVKSGAGGEESALFAGDLMRMYTKFAERRRWRVEVLSMAESDLGGVKDATISI 160 Query: 173 K--------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K + WLK E GVHR+ R+ +S R HTS + + YP +D+ +I I Sbjct: 161 KRTGGDQSPANGVWAWLKHEGGVHRVQRVPATESQGRIHTSAAGVLAYPEPEDAPDIVID 220 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E++ RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA+A +L A+L Sbjct: 221 ETELRIDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARL 280 Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +L +K A G + + +IR+Y P + D R + + VL+GDL Sbjct: 281 EQLREEKAAAEAASGRKEQIRTVDRSERIRTYNF-PENRITDHRIGYKANNLDMVLEGDL 339 Query: 344 DDFM 347 + + Sbjct: 340 EAML 343 >gi|218283971|ref|ZP_03489832.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989] gi|218215488|gb|EEC89026.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989] Length = 358 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 144/240 (60%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS++A LE+ AGG E +A L RMY+++AE + ++TE +E+ D E G + + Sbjct: 108 DSHNAILEIRGAAGGDEGNIFAGDLFRMYSKYAEAKGWRTEVIEMEDSEAGGFSLVSFKV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS +++ P V+ + + +I +D I+T Sbjct: 168 NGEGAYGTLKFESGSHRVQRVPKTESQGRIHTSTATVLCMPEVE-AEDFDIDMNDLEIET 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SGAGGQH+N TDSAVRI H PTG+VV+CQ RSQH+N+A A +RA++YE E Q+ Sbjct: 227 MRSSGAGGQHINKTDSAVRIVHKPTGIVVKCQDGRSQHENRATALMTIRARVYE-ERQRE 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + N E +T+IG G +IR+Y P V D R ++DG LDD M A Sbjct: 286 LDQKNEKE-RRTKIGTGDRAEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMDGRLDDLMAA 343 >gi|40062805|gb|AAR37689.1| peptide chain release factor 1 [uncultured marine bacterium 440] Length = 359 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 99/234 (42%), Positives = 143/234 (61%), Gaps = 7/234 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ +A LE+ AG GG E+ + L +MY + K+ E + I G K LL Sbjct: 106 ADAKNAILEIRAGTGGDEAGLFVADLYKMYEKVCLNNKWSFEIISISKSGAGGFKEVILL 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG N Y +LK E+GVHR+ R+ ++ R HTS +++ V P ++ ++I+I E D RID Sbjct: 166 IKGNNIYSFLKYERGVHRVQRVPKTETQGRVHTSAATVAVLPEAEE-VDIKIQEKDLRID 224 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YR++G+GGQ VNTTDSAVRITHIPTG+VV Q E+SQHKN+A+ +LR+++YE E +K Sbjct: 225 VYRSTGSGGQSVNTTDSAVRITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRVYEAEREK 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +++ + K +IG G +IR+Y P V D R N+ + L GD Sbjct: 285 KDK--ERSKDRKNQIGSGDRSERIRTYNF-PQGRVTDHRINVTLHKLKEFLSGD 335 >gi|71893491|ref|YP_278937.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae J] gi|119361562|sp|Q4AAJ5|RF1_MYCHJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71851618|gb|AAZ44226.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae J] Length = 361 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 122/336 (36%), Positives = 183/336 (54%), Gaps = 35/336 (10%) Query: 43 KMLMRERQHLDNA-----ISFIKEIQDRLCDNLILLE----LALEEDDCSILQETSDNLQ 93 ++L ++Q+L A IS I E+ + D+ +LE + ++EDD ++Q L Sbjct: 27 QILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVLEDAKTILIQEDDPELIQ-----LA 81 Query: 94 RIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 ++++ K E L + D D +E+ AGG E+ + L +MY +W Sbjct: 82 KVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEANIFVGDLFKMYHKW 141 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A+ +K K + L G I G Y LK E GVHR+ R+ ++ R HT Sbjct: 142 ADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRVQRVPATETMGRIHT 201 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTDSAVRITHIPTG+VV Q Sbjct: 202 STATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAVRITHIPTGIVVTSQ 261 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIAN-----IGESSKTEIGWGRQIRSYVLQP 319 ERSQ NK A +L++K+Y LELQK+++ + G +++E +IR+Y P Sbjct: 262 DERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGARSE-----KIRTYNY-P 315 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + D R N TS ++ G L+ ++A LA +K Sbjct: 316 QDRLTDHRINFS-TSLKPIIQGSLNPIIEALLAQEK 350 >gi|261366981|ref|ZP_05979864.1| peptide chain release factor 1 [Subdoligranulum variabile DSM 15176] gi|282571098|gb|EFB76633.1| peptide chain release factor 1 [Subdoligranulum variabile DSM 15176] Length = 359 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 98/249 (39%), Positives = 153/249 (61%), Gaps = 8/249 (3%) Query: 107 LLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL +AD + LE+ AGAGG E+ +A+ L RMYT +A KR + + + ++ E G+ Sbjct: 101 LLPKDADDEKNVILEIRAGAGGEEAALFAHSLWRMYTMYASKRGWSCQTISANETELGGV 160 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ++G + Y LK E GVHR+ R+ ++ R HTS ++ V P ++ +E+E+ Sbjct: 161 KEVVFSVEGADVYSRLKFESGVHRVQRVPETETQGRIHTSTVTVAVMPEAEE-VELELDP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDT+R+SGAGGQH+N T SA+R+TH+PTG+VV+CQ +RSQ +NK +A +LR++L Sbjct: 220 KDLRIDTFRSSGAGGQHINKTSSAIRVTHLPTGMVVECQDQRSQRENKERALTVLRSRLL 279 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + + Q +E N E ++++G G +IR+Y P V D R + + VLDGD Sbjct: 280 QQKQQAYDEAYN--EKRQSQVGTGDRSEKIRTYNF-PQDRVTDHRIGLTLRNLQGVLDGD 336 Query: 343 LDDFMKATL 351 LD ++ + Sbjct: 337 LDRVLEPLI 345 >gi|289663473|ref|ZP_06485054.1| peptide chain release factor 1 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667596|ref|ZP_06488671.1| peptide chain release factor 1 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 361 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY R+AE++ +K E GE G K + Sbjct: 107 DDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P DD EI I+ +D ++DT Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A L+A+L E E K Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKAMKRLKAQLAEAERSK- 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348 A ++ K ++G G ++IR+Y P + D R + ++++GDLD + Sbjct: 286 -AAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIA 343 Query: 349 ATL 351 L Sbjct: 344 RLL 346 >gi|303248208|ref|ZP_07334471.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ] gi|302490346|gb|EFL50257.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ] Length = 357 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 102/245 (41%), Positives = 145/245 (59%), Gaps = 11/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMY+R+AE +++K E + + G K I Sbjct: 105 DEKNILLEIRAGTGGEEAALFAGDLFRMYSRYAETKRWKVEIMSSSETGSGGFKEVIANI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ + P ++ +++ I +D RID Sbjct: 165 SGDKVYSRLKYESGAHRVQRVPATESQGRIHTSAVTVAIMPEAEE-VDVAIDPNDLRIDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY--ELELQ 290 YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQHKNKA+A +LR++L E E Q Sbjct: 224 YRSSGPGGQSVNTTDSAVRVTHIPTGLVVICQDEKSQHKNKAKALKVLRSRLLQAEQEKQ 283 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A S ++++G G +IR+Y P V D R N+ VL+GDLD+ Sbjct: 284 RLEQEA----SRRSQVGSGDRSERIRTYNF-PQSRVTDHRINLTLYKLEAVLEGDLDELF 338 Query: 348 KATLA 352 +A Sbjct: 339 DGLIA 343 >gi|197301354|ref|ZP_03166435.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC 29176] gi|197299511|gb|EDY34030.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC 29176] Length = 356 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 97/243 (39%), Positives = 150/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A + RMY +A+ R++KTE + +++ G K ++ Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E GVHR+ R+ +S R HTS ++ V P ++ +++ I E D RID Sbjct: 166 TGQGAYSRMKYESGVHRVQRVPETESGGRIHTSTITVAVMPEAEE-VDVVIDEKDIRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLY+LEL+K+ Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQ 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A+ +++IG G +IR+Y P V D R + +L+GDLD+ + + Sbjct: 285 Q--ASEAAERRSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEIIDS 341 Query: 350 TLA 352 +A Sbjct: 342 LIA 344 >gi|254476963|ref|ZP_05090349.1| peptide chain release factor 1 [Ruegeria sp. R11] gi|214031206|gb|EEB72041.1| peptide chain release factor 1 [Ruegeria sp. R11] Length = 351 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 104/256 (40%), Positives = 148/256 (57%), Gaps = 14/256 (5%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L ADS A LE+ G GG E+ +A LLRMY R+AE + + E +E E Sbjct: 92 QLALLPRDAADSKPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEAQGWTFEIIEEQSTEL 151 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G+K +KG N + LK E GVHR+ R+ +S R HTS +++ V P ++ +++ Sbjct: 152 GGLKEVVAHVKGNNVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEE-VDLR 210 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I +D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V E+SQH+N+ A +LR Sbjct: 211 IDPADLRIDTMRASGAGGQHVNTTDSAVRITHIPTGIIV-VSSEKSQHRNREIAMQVLRT 269 Query: 283 KLYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +LY+LE Q+ + + +G ++E +IR+Y P + D R N+ Sbjct: 270 RLYDLERQRIDSERSADRASQVGSGDRSE-----RIRTYNF-PQGRMSDHRINLTLYKLD 323 Query: 337 DVLDGDLDDFMKATLA 352 ++ GDLD+ + A A Sbjct: 324 QIMQGDLDEIIDALTA 339 >gi|206895451|ref|YP_002247173.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM 5265] gi|206738068|gb|ACI17146.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM 5265] Length = 360 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 125/338 (36%), Positives = 190/338 (56%), Gaps = 15/338 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R L E+P + + + LMRE+ LD I I + + +L ++ + LEE Sbjct: 12 ERYESLVRDLENPEIASDPEQLMKLMREKSQLDPIIEKIADYR-KLIRDIESAKAILEEP 70 Query: 81 DCSILQETSD----NLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 L+E ++ NL+ I L + K+ + LL D +E+ AG GG E+ +A Sbjct: 71 GEDELKELAEEELRNLEDI-LPQKEKELKLLLVEPDPMDEKPVIVEIRAGVGGEEAALFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE++ +K E ++ + + G K ++G Y LK E GVHR+ R+ Sbjct: 130 GDLFRMYTRYAERKGWKVELVDSNPTDLGGFKEVVFSVEGDRVYSRLKYESGVHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S+ R HTS +++ V P VD+ +EIEI+E D IDT+RA G GGQ+V ++AVRI H Sbjct: 190 ETESSGRIHTSTATVAVLPEVDE-VEIEINEEDLEIDTFRAGGHGGQNVQKNETAVRIKH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQ 311 PTG+VV CQ ERSQ +NK +A +LRAKLYE +L++R++ ++ ++ IG G + Sbjct: 249 KPTGIVVTCQDERSQLQNKMKALKVLRAKLYERQLEERQK--SMSSFRRSLIGSAERGEK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 IR+Y + V D R N LDGDLD+ + A Sbjct: 307 IRTYNFMQNR-VTDHRINYTIYYLDRFLDGDLDEMIDA 343 >gi|328555408|gb|AEB25900.1| peptide chain release factor 1 [Bacillus amyloliquefaciens TA208] gi|328913779|gb|AEB65375.1| peptide chain release factor 1 [Bacillus amyloliquefaciens LL3] Length = 356 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 117/339 (34%), Positives = 184/339 (54%), Gaps = 13/339 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77 QR LN DP + + + + +E+ + + ++ +D +L D +LE L Sbjct: 10 QRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLADAKAMLEDKL 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 + D +++E LQR + E ++ + LL D + +E+ AGG E+ +A Sbjct: 70 DADMREMVKEEISELQR-ETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE + +KTE +E G K +I G AY LK E G HR+ R+ Sbjct: 129 NLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENGAHRVQRVPE 188 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ P ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+ Sbjct: 189 TESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 247 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K+ +G G +I Sbjct: 248 PTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYDQNRKSAVGSGDRSERI 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R + +L+G LD+ ++A + Sbjct: 306 RTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALI 343 >gi|320169793|gb|EFW46692.1| peptide chain release factor 1 [Capsaspora owczarzaki ATCC 30864] Length = 523 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 102/245 (41%), Positives = 153/245 (62%), Gaps = 9/245 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D +A LEV AG GG E+ +++ + MY +AE R +K E ++I + G K A+ Sbjct: 257 EVDDRNAILEVRAGTGGLEASLFSSDMFTMYQNYAEIRGWKFEVIDISRSDVGGFKEASA 316 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G +G LK E GVHR+ R+ +S R HTS ++ + P D ++IE++E D RI Sbjct: 317 TISGYGVFGHLKFESGVHRVQRVPQTESQGRVHTSTVTVALLPEAQD-VDIELNERDLRI 375 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 +T RASGAGGQHVN T+SA+R+THIP+G+ V Q++RSQHKN+A+A+++LRA+LYE++ Sbjct: 376 ETMRASGAGGQHVNKTESAIRVTHIPSGIAVHVQEDRSQHKNRAKAYSVLRARLYEIQ-- 433 Query: 291 KREEIANIGESSKTE-IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 RE++A + + E +G G +IR+Y P V D R N+ + L G+ D Sbjct: 434 -REKLAQERAAHRAEQVGTGSRSERIRTYNF-PQDRVTDHRVNVTLHGVPEFLLGEGLDE 491 Query: 347 MKATL 351 + A+L Sbjct: 492 IIASL 496 >gi|190572913|ref|YP_001970758.1| peptide chain release factor 1 [Stenotrophomonas maltophilia K279a] gi|229576662|sp|B2FQ14|RF1_STRMK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|190010835|emb|CAQ44444.1| putative peptide chain release factor 1 [Stenotrophomonas maltophilia K279a] Length = 360 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 147/240 (61%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY R+AE++ +K E + GE G K + Sbjct: 107 DEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGYKEVVARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A+ LK E G HR+ R+ +S R HTS +++ + P D+ +I I+ +D ++DT Sbjct: 167 VGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEVDDIVINPADLKVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH N+ +A L+A+L + E Q++ Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLLDAERQRQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348 + A ES + ++G G ++IR+Y P + D R + ++L GDLD ++ Sbjct: 287 D--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRVEGLTLYDLPNILAGDLDPLLQ 343 >gi|332980841|ref|YP_004462282.1| peptide chain release factor 1 (bRF-1) [Mahella australiensis 50-1 BON] gi|332698519|gb|AEE95460.1| bacterial peptide chain release factor 1 (bRF-1) [Mahella australiensis 50-1 BON] Length = 356 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 116/342 (33%), Positives = 191/342 (55%), Gaps = 11/342 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ +R L+ K DP + + L++E L+ ++ +E ++ + +L + Sbjct: 6 DSIEERYEQLSVKISDPEVISQQDMWRKLVKEHSDLEPIVTKYREYKEVVRQKDDVLAMI 65 Query: 77 LEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQD 132 E D + + L +K E + ++ L D ND +E+ AGAGG E+ Sbjct: 66 KETGDAELKELAQQELDELKEREDKLEEELKRLLLPKDPNDERNVIMEIRAGAGGEEAAL 125 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+ +AE R +K E ++ + + GIK ++G AY LK E GVHR+ R Sbjct: 126 FAANLFRMYSLYAESRGWKIEVMDSNYTDLGGIKEIVFAVEGKGAYSRLKYESGVHRVQR 185 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P ++ +E+EI+ +D RID YR++G GGQ VNTTDSAVRI Sbjct: 186 VPVTEAGGRIHTSTATVAVLPEAEE-VEVEINPNDLRIDVYRSTGHGGQSVNTTDSAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ E+SQ KNK +A +L+++L L + + E+ A + ++ ++++G G Sbjct: 245 THIPTGMVVTCQDEKSQLKNKDKAMRVLKSRL--LAIAQAEQDAQLAQTRRSQVGTGDRS 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + L+GD+D+ + A + Sbjct: 303 ERIRTYNF-PQGRVTDHRIGLTIYQLEAFLNGDMDEMIDALI 343 >gi|288554407|ref|YP_003426342.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4] gi|288545567|gb|ADC49450.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4] Length = 356 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 116/337 (34%), Positives = 184/337 (54%), Gaps = 11/337 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALE 78 R + LN DP + + + + +E+ ++ + KE+ + D +LE L+ Sbjct: 11 RYNRLNELLSDPDIISDSKKLREFSKEQSDIEETVQAYREYKEVVSQYKDAKAMLEDKLD 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANML 137 ++ ++++E D L + E+E + LL + D + +E+ AGG E+Q +A L Sbjct: 71 DEMYAMVKEEMDELSTRQEELEARLKILLLPKDPNDDKNVIVEIRGAAGGDEAQLFAGDL 130 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +MY+R+AE + +KTE +E E G K + G AY LK E G HR+ R+ + Sbjct: 131 YKMYSRFAEAQGWKTEVIEATSTELGGYKEIIFSVNGAGAYSKLKYENGAHRVQRVPQTE 190 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS +++ V P ++ +E+EI E D R+DT+ +SG GGQ VNTT SAVR+TH+PT Sbjct: 191 SGGRIHTSTATVAVLPEAEE-VEVEIHEKDIRVDTFTSSGPGGQSVNTTMSAVRLTHLPT 249 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G VV CQ E+SQ KNK +A +LRA++Y + +RE A ++ K +G G +IR+ Sbjct: 250 GTVVSCQDEKSQIKNKEKAMKVLRARVY--DKVQREVQAEYDQNRKLAVGTGDRSERIRT 307 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y P V D R + +L G LD+ + A + Sbjct: 308 YNF-PQSRVTDHRIGLTIQKLEQILQGKLDEVIDALI 343 >gi|149185458|ref|ZP_01863774.1| protein chain release factor A [Erythrobacter sp. SD-21] gi|148830678|gb|EDL49113.1| protein chain release factor A [Erythrobacter sp. SD-21] Length = 355 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 96/222 (43%), Positives = 135/222 (60%), Gaps = 7/222 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ AG GG E+ +A L RMY R+A + +K E + ++ E G K Sbjct: 103 ADNKPAMLEIRAGTGGDEAALFAGDLFRMYERYAAEMGWKVEPVSMNASEVGGFKEIVAS 162 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + GPN + LK E GVHR+ R+ +S R HTS +++ V P D+ +++++ ++ +ID Sbjct: 163 VTGPNVFAKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEPDE-VDVQLDPTELKID 221 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYRASGAGGQHVNTTDSA+RITH+PTG VV CQ RSQHKNK +A +LR +LY + Q+ Sbjct: 222 TYRASGAGGQHVNTTDSAIRITHLPTGTVVTCQDGRSQHKNKEKAMQVLRTRLY--DAQR 279 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E+ K +G G +IR+Y P V D R + Sbjct: 280 EATQGAEAEARKAMVGSGDRSERIRTYNY-PQGRVTDHRIGL 320 >gi|289549312|ref|YP_003474300.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484] gi|289182929|gb|ADC90173.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484] Length = 359 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 125/352 (35%), Positives = 188/352 (53%), Gaps = 27/352 (7%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 R L + D D RL F + + + E + L R Q + ++E ++ Sbjct: 16 RYLQLQAEVLDPDIVKDRLKF-------AQISKELKELEELHRLHQEYRKILKELEETKE 68 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L N L LA EE + +E +RIK+ + L E DS + LE+ AG Sbjct: 69 -LLKNPELEPLAKEEIK-RLEKELESTEKRIKIHL-------LPKDERDSKNVILEIRAG 119 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG E+ +A LL MY R+AE++ +K L G K L++G AY LK E Sbjct: 120 VGGEEAALFARDLLHMYQRYAEEKGWKFSILSAQKTGLGGYKEVIALVEGEGAYSRLKYE 179 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ ++ R HTS +++ V P D++ E+ I D +I+T+RAS AGGQ+VN Sbjct: 180 SGVHRVQRVPVTEAGGRIHTSTATVAVLPEADET-EVHIDPKDLKIETFRASSAGGQYVN 238 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSK 303 TT++AVRITH+PTG+VV CQ ERSQ++N+ +A +L A+L + + QKREE+A + Sbjct: 239 TTETAVRITHLPTGIVVTCQDERSQYQNRMKALKILYARLKDFYDRQKREELAK---EKR 295 Query: 304 TEIGWGRQIRSYVLQPYQMVK----DLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IG G RS ++ Y ++ D R N+ DVL+G LD+ + A + Sbjct: 296 EQIGTGE--RSEKIRTYNFIQNRVTDHRINLTIYRLQDVLEGKLDEIIDALI 345 >gi|32267276|ref|NP_861308.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449] gi|46576742|sp|Q7VFA0|RF1_HELHP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|32263329|gb|AAP78374.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449] Length = 355 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/244 (41%), Positives = 148/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + YLE+ AG GG E+ + L + Y R+A+ +K+K E + ++ G K L+ Sbjct: 104 DNKNIYLEIRAGTGGDEAGIFVGDLFKAYCRYADLQKWKVEIISSNENNVGGYKEVIALV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AY LK E G HR+ R+ +S R HTS ++ + P VDD +EI I+ +D +ID Sbjct: 164 KGNGAYSKLKFEGGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEININPNDLKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+ G GGQ VNTTDSAVRITHIPTG+ V Q E+SQHKNK +A +L+A+LYE EL+ + Sbjct: 223 FRSGGHGGQSVNTTDSAVRITHIPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 A E+ KT++G G +IR+Y P + D R + S ++ L G LD+F+ Sbjct: 283 N--AQNKEARKTQVGSGDRSERIRTYNY-PQNRLTDHRIGLTLYSLEEIMLGGLLDEFIN 339 Query: 349 ATLA 352 +A Sbjct: 340 PLIA 343 >gi|120612308|ref|YP_971986.1| peptide chain release factor 1 [Acidovorax citrulli AAC00-1] gi|166223521|sp|A1TTC4|RF1_ACIAC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120590772|gb|ABM34212.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax citrulli AAC00-1] Length = 360 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 104/259 (40%), Positives = 152/259 (58%), Gaps = 9/259 (3%) Query: 95 IKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 ++LE E ++ LL + D + +A+LE+ AG GG ES +A L RMYTR+A +K E Sbjct: 90 VQLEDELQRL--LLPRDPDEARNAFLEIRAGTGGDESALFAGDLARMYTRYAATAGWKVE 147 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 L D E G K L ++G YG L+ E G HR+ R+ ++ R HTS ++ V P Sbjct: 148 ILSASDNEIGGYKEVVLRVEGDGVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMP 207 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D+ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H+PTG+V +CQ RSQH NK Sbjct: 208 EPDEQQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNK 267 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 A+A +L+A++ E E + E A K +G G +IR+Y P + D R N+ Sbjct: 268 AKALQVLQARIQEKE--RSERAAKEAALRKGLVGSGDRSDRIRTYNF-PQGRLTDHRINL 324 Query: 331 EKTSPSDVLDGDLDDFMKA 349 +++GDL + ++A Sbjct: 325 TLYKLLAIMEGDLGEVLEA 343 >gi|268678716|ref|YP_003303147.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM 6946] gi|268616747|gb|ACZ11112.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM 6946] Length = 355 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 101/236 (42%), Positives = 143/236 (60%), Gaps = 7/236 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L + Y R+AE R +K E + + +G G K LI Sbjct: 104 DERNIFLEIRAGTGGDEAAIFAADLFKSYLRYAENRGWKVEVVSLSEGVLNGYKEVIALI 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG A+ LK E GVHR+ R+ +S R HTS ++ V P VDD +E++I E D +ID Sbjct: 164 KGQGAFSRLKYEGGVHRVQRVPLTESQGRVHTSAVTVAVMPEVDD-VEVDIQEKDLKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITH+PTG+VV Q +SQHKNK A +L+AKLY++++Q+R Sbjct: 223 MRSSGNGGQSVNTTDSAVRITHLPTGIVVVNQDGKSQHKNKDAAMKILKAKLYDMQMQER 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 A E+ K ++G G +IR+Y P + D R + +++G L D Sbjct: 283 N--AKESEARKQQVGSGDRSARIRTYNY-PQNRITDHRVGLTLYRLDAIMEGGLYD 335 >gi|15834912|ref|NP_296671.1| peptide chain release factor 1 [Chlamydia muridarum Nigg] gi|270285082|ref|ZP_06194476.1| peptide chain release factor 1 [Chlamydia muridarum Nigg] gi|270289105|ref|ZP_06195407.1| peptide chain release factor 1 [Chlamydia muridarum Weiss] gi|301336478|ref|ZP_07224680.1| peptide chain release factor 1 [Chlamydia muridarum MopnTet14] gi|13878666|sp|Q9PL16|RF1_CHLMU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|7190335|gb|AAF39160.1| peptide chain release factor 1 [Chlamydia muridarum Nigg] Length = 359 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 189/346 (54%), Gaps = 21/346 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76 ++RL + DP+++ N E L +E L NA I + L D+ + L Sbjct: 9 LRRLEEVEKLISDPNIFSNPKEYSSLSKEHARLSEIKNAHESILAAKKILHDDKLALSTE 68 Query: 77 LEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTES 130 + + ++L+E ++L+R+ KQ E+LL +D +E+ AG GG E+ Sbjct: 69 KDPEMIAMLEEGIQGGEESLERLS-----KQLENLLIPPDPDDDLSVIMELRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + +RMY +A + ++ E L + + G K + + G + +L+ E G HR+ Sbjct: 124 ALFVGDCVRMYHLYASIKGWQCEVLSASESDLGGYKEYIMGVSGTSVKRFLQYEAGTHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 R+ ++ R HTS +I V P +D E+ I E D RIDT+R+SGAGGQHVN TDSA Sbjct: 184 QRVPETETQGRVHTSAVTIAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTGVVV CQ ERSQHKNKA+A +L+A++ + E+QKRE+ A+ S+ ++G G Sbjct: 244 VRITHIPTGVVVSCQDERSQHKNKAKAMRVLKARIRDAEVQKREQEASAMRSA--QVGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R + + V+ G+LD A ++ Sbjct: 302 DRSERIRTYNF-PQNRVTDHRIGLTLYNLDRVMQGELDMITTALVS 346 >gi|218507716|ref|ZP_03505594.1| peptide chain release factor 1 [Rhizobium etli Brasil 5] Length = 282 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R+A ++ +K E L +GE G K Sbjct: 30 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIAT 89 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 90 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 148 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ Sbjct: 149 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 207 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P V D R N+ +++G++++ + Sbjct: 208 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVD 264 Query: 349 ATLA 352 A +A Sbjct: 265 ALMA 268 >gi|71892127|ref|YP_277859.1| peptide chain release factor 1 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|119361510|sp|Q492V8|RF1_BLOPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71796233|gb|AAZ40984.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 360 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 99/246 (40%), Positives = 150/246 (60%), Gaps = 9/246 (3%) Query: 112 ADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 DSND ++E+ AG GG E+ + L RMY R++E R++K E + GE G K Sbjct: 103 TDSNDKLGCFIELRAGTGGKEAAIFTGELFRMYVRYSEVRRWKMEIINATYGECGGYKEI 162 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 I AY LK E G HR+ RI +S R HTS +I V P + D I D Sbjct: 163 IAKIPYRGAYSLLKFESGGHRVQRIPHTESQGRIHTSTCTIAVIPEIPDIELPSIDPHDL 222 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT+R+SGAGGQHVNTTDSA+RITH+P+G+VV+CQ ERSQHKNKA+A ++L ++L+ +E Sbjct: 223 RIDTFRSSGAGGQHVNTTDSAIRITHVPSGLVVECQDERSQHKNKAKALSVLGSRLHAIE 282 Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +++R++ + + + +G G +IR+Y Q + + D R + +++++G+LD Sbjct: 283 MKRRQQ--EVSCTRRNLLGTGDRSDRIRTYNFQQGR-ITDHRISFTSYKLNEIMNGELDL 339 Query: 346 FMKATL 351 ++ + Sbjct: 340 LIQPII 345 >gi|21241714|ref|NP_641296.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri str. 306] gi|294626107|ref|ZP_06704714.1| peptide chain release factor 1 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666025|ref|ZP_06731287.1| peptide chain release factor 1 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|24418638|sp|Q8PNU5|RF1_XANAC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21107082|gb|AAM35832.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri str. 306] gi|292599556|gb|EFF43686.1| peptide chain release factor 1 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604217|gb|EFF47606.1| peptide chain release factor 1 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 361 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/258 (39%), Positives = 152/258 (58%), Gaps = 9/258 (3%) Query: 96 KLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 +LE Q SLL +D +LEV AG GG E+ +A L RMY R+AE++ +K E Sbjct: 88 RLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVE 147 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 GE G K + G AY LK E G HR+ R+ +S R HTS +++ + P Sbjct: 148 IESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIP 207 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ Sbjct: 208 EADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANR 267 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-N 329 +A L+A+L L+ ++ + A ++ K ++G G ++IR+Y P + D R Sbjct: 268 DKAMKRLKAQL--LDTERSKAAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEG 324 Query: 330 IEKTSPSDVLDGDLDDFM 347 + ++++GDLD + Sbjct: 325 LTLYDLPNIIEGDLDALI 342 >gi|329121081|ref|ZP_08249712.1| peptide chain release factor RF1 [Dialister micraerophilus DSM 19965] gi|327471243|gb|EGF16697.1| peptide chain release factor RF1 [Dialister micraerophilus DSM 19965] Length = 359 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 114/344 (33%), Positives = 191/344 (55%), Gaps = 15/344 (4%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R L K DP + +N + + +E L ++ ++ + + LE+ +++ Sbjct: 12 RYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVVETQNAALEILNDKNQ 71 Query: 82 CSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDA---YLEVHAGAGGTESQDWANML 137 + + ++L+ + E+E + + LL D ND+ LE+ AG GG E+ + L Sbjct: 72 EELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEAALFVADL 131 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 L+MY ++AE RK+K +++++ + G + I G NAY LK E GVHR+ RI + Sbjct: 132 LKMYLKFAEHRKWKCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRVQRIPETE 191 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S+ R HTS ++ V P +D ++IEIS+ D R+D YRASGAGGQH+N T SA+RITH+PT Sbjct: 192 SSGRVHTSAVTVAVLPEAED-VDIEISKEDIRVDVYRASGAGGQHINKTSSAIRITHLPT 250 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+VV CQ ER Q +N+ +A +L+A+LY+ L+K + + ++ K ++G G +IR+ Sbjct: 251 GIVVTCQNERDQRQNREKAMQILKARLYDEALRKTK--SETAQNRKEQVGSGDRSERIRT 308 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDL----DDFMKATLAIK 354 Y P + D R + ++G + D ++A L +K Sbjct: 309 YNY-PQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLIEADLNLK 351 >gi|312115445|ref|YP_004013041.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC 17100] gi|311220574|gb|ADP71942.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC 17100] Length = 361 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/318 (36%), Positives = 182/318 (57%), Gaps = 14/318 (4%) Query: 43 KMLMRERQHLDNAISFIKEIQ----DRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98 K L +E LD ++ IK ++ +R ++ + A E D + +E + + + Sbjct: 33 KKLSKEFSDLDPLVAAIKTLEAAEEERDSLRQMIEDPAAEPDMAELAREELEAAEPRVEQ 92 Query: 99 VEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 +E++ Q L AD A LEV AG GG E+ +A L RMY R+A+ + +K L + Sbjct: 93 LEHELQIMLLPKDAADEKSAILEVRAGTGGEEAALFAADLFRMYQRYADLKGWKVNVLSV 152 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 D + G + I G + +K E GVHR+ R+ ++ R HTS +++ V P ++ Sbjct: 153 SDADAGGFREIVASISGKGVFARMKFESGVHRVQRVPETENQGRIHTSAATVAVLPEAEE 212 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++EI E D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V E+SQH+N+A+A Sbjct: 213 -VDVEIREQDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIIV-TSSEKSQHQNRARAM 270 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334 +LRA+L+++E + +E A E K +IG G ++IR+Y P V D R N+ + Sbjct: 271 QVLRARLFDMERTRIDE-ARAAE-RKDQIGSGDRSQRIRTYNF-PQGRVTDHRVNVTLYN 327 Query: 335 PSDVLDGD-LDDFMKATL 351 +++G+ LD + A + Sbjct: 328 LPQIMEGEGLDTIIDALI 345 >gi|222087303|ref|YP_002545840.1| peptide chain release factor 1 [Agrobacterium radiobacter K84] gi|254790855|sp|B9JB75|RF1_AGRRK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|221724751|gb|ACM27907.1| peptide chain release factor 1 [Agrobacterium radiobacter K84] Length = 359 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 100/244 (40%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ + L RMY R+A +K E L DGE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFGGDLFRMYERFAANNGWKVEILSASDGEAGGYKEVIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ITGKGVFSRLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRAEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+P+G+VV E+SQH+N+A+A +LR++L+++E Q+ Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLFDMERQR 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P V D R N+ +++G++D+ + Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIDEVVD 341 Query: 349 ATLA 352 A A Sbjct: 342 ALRA 345 >gi|308175429|ref|YP_003922134.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7] gi|307608293|emb|CBI44664.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7] Length = 356 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/339 (34%), Positives = 184/339 (54%), Gaps = 13/339 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77 QR LN DP + + + + +E+ + + ++ +D +L D +LE L Sbjct: 10 QRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLTDAKAMLEDKL 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 + D +++E LQR + E ++ + LL D + +E+ AGG E+ +A Sbjct: 70 DADMREMVKEEISELQR-ETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE + +KTE +E G K +I G AY LK E G HR+ R+ Sbjct: 129 NLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENGAHRVQRVPE 188 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ P ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+ Sbjct: 189 TESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 247 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K+ +G G +I Sbjct: 248 PTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYDQNRKSAVGSGDRSERI 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R + +L+G LD+ ++A + Sbjct: 306 RTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALI 343 >gi|322421625|ref|YP_004200848.1| peptide chain release factor 1 [Geobacter sp. M18] gi|320128012|gb|ADW15572.1| peptide chain release factor 1 [Geobacter sp. M18] Length = 359 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 119/333 (35%), Positives = 182/333 (54%), Gaps = 14/333 (4%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED- 80 R L + DP + N E + L +E L I+ +E + L D EL E D Sbjct: 13 RFEELESLLSDPEVLANQGEFRKLSKEHSGLAELIAAYREYKKVLADIGDNRELLKEPDQ 72 Query: 81 ---DCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136 + + + S +R +LE E K LL + D + LE+ AG GG ES +A Sbjct: 73 EMREMAQAELESLEERREQLESEIKVL--LLPKDPNDDKNVVLEIRAGTGGDESALFAGD 130 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY+R+AE +++ E + + E+ G K L++G + LK E G HR+ R+ Sbjct: 131 LFRMYSRFAEVNRWRVEVISASESEKGGFKEVIALVEGAGVFAKLKYESGTHRVQRVPET 190 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P +D ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITHIP Sbjct: 191 EAQGRIHTSACTVAVMPEAED-VDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHIP 249 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG VV CQ+ERSQ KN+A+A +L++++ + L E+ A + K+++G G +IR Sbjct: 250 TGTVVACQEERSQIKNRAKAMKVLKSRILDNILM--EQNAKLAADRKSQVGSGDRSERIR 307 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +Y P + D R + ++ GD+ + Sbjct: 308 TYNF-PQGRMTDHRIGLTLYRLDAIMAGDIGEI 339 >gi|329848654|ref|ZP_08263682.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19] gi|328843717|gb|EGF93286.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19] Length = 358 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 108/282 (38%), Positives = 165/282 (58%), Gaps = 20/282 (7%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDW 133 L E++ L+E+ +L+R +LL D ++ A LE+ AG GG E+ + Sbjct: 76 LAEEELGALKESLPDLER---------GVALLLAPKDKDENASAILELRAGTGGDEAALF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMY+R+A + +K E + +GE G K + G +G LK E GVHR+ R+ Sbjct: 127 AGDLFRMYSRYAAAQGWKVEVDSLSEGEAGGFKEIIASVTGEGVFGKLKFESGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P +D +EIEI + D RIDTYR+SGAGGQHVN TDSAVRIT Sbjct: 187 PATEAGGRIHTSAATVAVLPEAED-VEIEIHDKDLRIDTYRSSGAGGQHVNKTDSAVRIT 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VV E+SQH+N+A A L+A++Y+++ Q + + +S K+++G G Sbjct: 246 HLPTGIVV-TSSEKSQHQNRAIAMRNLKARMYDMQRQALDTARS--DSRKSQVGSGDRSE 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ + ++GD+ + A +A Sbjct: 303 RIRTYNY-PQGRVSDHRINLTLYNLPQFMEGDMGQMINALIA 343 >gi|78046531|ref|YP_362706.1| peptide chain release factor 1 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|119361637|sp|Q3BX07|RF1_XANC5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78034961|emb|CAJ22606.1| peptide chain release factor 1 [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 361 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/258 (39%), Positives = 152/258 (58%), Gaps = 9/258 (3%) Query: 96 KLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 +LE Q SLL +D +LEV AG GG E+ +A L RMY R+AE++ +K E Sbjct: 88 RLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVE 147 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 GE G K + G AY LK E G HR+ R+ +S R HTS +++ + P Sbjct: 148 IESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIP 207 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ Sbjct: 208 EADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANR 267 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-N 329 +A L+A+L L+ ++ + A ++ K ++G G ++IR+Y P + D R Sbjct: 268 DKAMKRLKAQL--LDAERSKAAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEG 324 Query: 330 IEKTSPSDVLDGDLDDFM 347 + ++++GDLD + Sbjct: 325 LTLYDLPNIIEGDLDALI 342 >gi|300814565|ref|ZP_07094819.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511333|gb|EFK38579.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 358 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 112/306 (36%), Positives = 176/306 (57%), Gaps = 26/306 (8%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSN 115 K+ ++ L D+ LL L++D ++++ NL++I+ +++ +L D N Sbjct: 52 KKTKENLNDSKALLAEKLDDDMKDLVKDDISTNEKNLEKIEEDLK------ILLIPKDPN 105 Query: 116 D---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +E+ AGAGG E+ +A L R Y R+AE+ +K + + ++ G K +I Sbjct: 106 DKKNVMVEIRAGAGGDEAALFAGTLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +S R HTS +++ V P V+D +E+EI ++ + D Sbjct: 166 IGRGAYSRLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEVED-VEVEIDPTEIKFDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+SQ NK +A +LRAKLY+L++Q++ Sbjct: 225 FRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQ 284 Query: 293 EE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E ++ +G ++E +IR+Y P V D R N + DG+LD+ Sbjct: 285 NEKNSAQRLSQVGTGDRSE-----RIRTYNY-PQGRVTDHRINYTTHQIDSINDGELDEL 338 Query: 347 MKATLA 352 + A A Sbjct: 339 IDALTA 344 >gi|325929457|ref|ZP_08190585.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas perforans 91-118] gi|325540232|gb|EGD11846.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas perforans 91-118] Length = 361 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/258 (39%), Positives = 152/258 (58%), Gaps = 9/258 (3%) Query: 96 KLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 +LE Q SLL +D +LEV AG GG E+ +A L RMY R+AE++ +K E Sbjct: 88 RLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVE 147 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 GE G K + G AY LK E G HR+ R+ +S R HTS +++ + P Sbjct: 148 IESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIP 207 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ Sbjct: 208 EADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANR 267 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-N 329 +A L+A+L L+ ++ + A ++ K ++G G ++IR+Y P + D R Sbjct: 268 DKAMKRLKAQL--LDAERSKAAAAEAQTRKLQVGSGDRSQRIRTYSF-PQGRITDHRVEG 324 Query: 330 IEKTSPSDVLDGDLDDFM 347 + ++++GDLD + Sbjct: 325 LTLYDLPNIIEGDLDALI 342 >gi|223983553|ref|ZP_03633736.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM 12042] gi|223964481|gb|EEF68810.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM 12042] Length = 359 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 99/244 (40%), Positives = 143/244 (58%), Gaps = 9/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +E+ AGG E +A L RMY R+AE + +K + LE+ + E G + L+ Sbjct: 108 DDHDCIVEIRGAAGGDEGNIFAGDLYRMYVRYAETQGWKIQVLEMSESEAGGFSMISFLV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ ++ R HTS +++ V P +++ +IEI +D +T Sbjct: 168 KGGEVYRQLKFESGAHRVQRVPKTETQGRIHTSTATVLVLPDAEEA-DIEIDPADLTFET 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQK 291 +RASGAGGQH+N TDSAVRI H+PTG+ V CQ+ RSQH+N+ A ++RA++Y EL QK Sbjct: 227 HRASGAGGQHINKTDSAVRIVHVPTGITVNCQEGRSQHENRETALRLIRARVYEELTRQK 286 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 EE G + +IG G +IR+Y P V D R +++G LDD + Sbjct: 287 EEE---EGAVRRAKIGTGDRSEKIRTYNY-PQNRVTDHRIGFTINQLDRIMEGKLDDVIA 342 Query: 349 ATLA 352 A LA Sbjct: 343 ALLA 346 >gi|163943017|ref|YP_001647901.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4] gi|229470347|sp|A9VSC7|RF1_BACWK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|163865214|gb|ABY46273.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4] Length = 355 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 124/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D AV+ R LN DP + + + + +E+ + + + +E +D +L D Sbjct: 1 MLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLRD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125 +LE L+ D +++E L+ E + +L D ND +EV A Sbjct: 61 AKAMLEDKLDADMRDMVKEEVSELE--GQEKTLSERLKILLVPKDPNDDKNVIVEVRGAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E Sbjct: 119 GGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFEN 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ V P ++ +EI I E D R+DT+ +SG GGQ VNT Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEINIHEKDVRVDTFASSGPGGQSVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K Sbjct: 238 TMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQA 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 VGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 341 >gi|54020410|ref|YP_115756.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 232] gi|61214589|sp|Q601F9|RF1_MYCH2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|53987583|gb|AAV27784.1| peptide chain release factor 1 (RF-1), peptide termination factor [Mycoplasma hyopneumoniae 232] Length = 361 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/319 (36%), Positives = 176/319 (55%), Gaps = 30/319 (9%) Query: 55 AISFIKEIQDRLCDNLILLE----LALEEDDCSILQETSDNLQRIKLEVEYKQFES---- 106 +I+ I E+ + D+ +LE + ++EDD ++Q L ++++ K E Sbjct: 44 SITEIIEVFQKFLDDQKVLEDAKTILIQEDDPELIQ-----LAKVEIATMSKNIEEYEKK 98 Query: 107 -----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 L + D D +E+ AGG E+ + L +MY +WA+ +K K + L Sbjct: 99 LLILMLPKDKNDEKDVIVEIRGAAGGDEANIFVGDLFKMYHKWADSQKAKVKVLSSSLAL 158 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G I G Y LK E GVHR+ R+ ++ R HTS +++ V P +D+ IEI Sbjct: 159 AGGFSQIIFQISGQKIYSKLKFESGVHRVQRVPATETMGRIHTSTATVTVMPKIDEKIEI 218 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ SD +IDTYR+SGAGGQ VNTTDSAVRITHIPTG+VV Q ERSQ NK A +L+ Sbjct: 219 EINPSDLKIDTYRSSGAGGQSVNTTDSAVRITHIPTGIVVTSQDERSQIGNKEIAMGILK 278 Query: 282 AKLYELELQKREEIAN-----IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +K+Y LELQK+++ + G +++E +IR+Y P + D R N TS Sbjct: 279 SKIYNLELQKQQQKQSDFRKLAGSGARSE-----KIRTYNY-PQDRLTDHRINFS-TSLK 331 Query: 337 DVLDGDLDDFMKATLAIKK 355 ++ G+L+ ++A LA +K Sbjct: 332 PIIQGNLNPIIEALLAQEK 350 >gi|152977515|ref|YP_001377032.1| peptide chain release factor 1 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189039958|sp|A7GV79|RF1_BACCN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|152026267|gb|ABS24037.1| peptide chain release factor 1 [Bacillus cytotoxicus NVH 391-98] Length = 355 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 126/353 (35%), Positives = 189/353 (53%), Gaps = 24/353 (6%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D AV+ R LN DP + + + + +E+ + + +E +D +L D Sbjct: 1 MLDRLQAVEDRYEKLNELLSDPAVINDSNKLREYSKEQSDIQETVEVYREYKDVREQLQD 60 Query: 69 NLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFE---SLLSGEADSND---AYLEV 121 +LE L+ + ++ +E SD LEV+ K+ +L D ND +E+ Sbjct: 61 AKAMLEDKLDAEMREMVKEEVSD------LEVQEKELSDRLKILLVPKDPNDDKNVIVEI 114 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGG E+ +A L RMY+R+AE + +KT+ +E E G K +I G AY L Sbjct: 115 RGAAGGDEAALFAGDLYRMYSRYAEMQGWKTDIIEASYTELGGYKEIIFMINGKGAYAKL 174 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ Sbjct: 175 KFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDIRVDTFASSGPGGQ 233 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 234 SVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFRQ--EAQAEYDQN 291 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +G G +IR+Y P V D R + +L G LDDF+ A + Sbjct: 292 RKQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALV 343 >gi|312884085|ref|ZP_07743798.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368255|gb|EFP95794.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC BAA-2122] Length = 362 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 96/242 (39%), Positives = 149/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AGAGG E+ +A L RMY+++AEK+ ++ E + ++ E G K + Sbjct: 109 DDRNCFLEIRAGAGGDEAGIFAGDLFRMYSKFAEKKGWRIEVMSSNEAEHGGYKEMIAKV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG +K E G HR+ R+ +S R HTS ++ + + ++ EI +D +IDT Sbjct: 169 SGEGAYGIMKFESGGHRVQRVPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVNTTDSA+RITH+PTG VV+CQ ERSQHKNKA+A +L A++ ++ ++ Sbjct: 229 FRASGAGGQHVNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMAVLAARI--IQAEEA 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A ++ + +G G +IR+Y P V D R N+ ++V++GD+ + Sbjct: 287 KRAAEESDTRRNLLGSGDRSDRIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDVSSLIDP 345 Query: 350 TL 351 L Sbjct: 346 VL 347 >gi|229496751|ref|ZP_04390462.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC 35406] gi|229316297|gb|EEN82219.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC 35406] Length = 362 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 111/279 (39%), Positives = 155/279 (55%), Gaps = 20/279 (7%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+A ++ C LQE +I L + L D +A +E+ AG GG E+ + Sbjct: 85 EIAFADEQCPQLQE------KIALLL-------LPDDPEDGKNAIMEIRAGTGGDEAALF 131 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L +MYTR+ E ++ E +G G K + G NAYG LK E GVHR+ R+ Sbjct: 132 ARDLFKMYTRFVEGLGWRVEVSSYTEGTLGGYKEIVFSVTGDNAYGTLKYESGVHRVQRV 191 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V+P D+ ++EI ESD RIDT+ +SGAGGQ VNTT SAVRI Sbjct: 192 PETEAQGRIHTSAATVAVFPEADE-FDVEIKESDLRIDTFCSSGAGGQSVNTTYSAVRIV 250 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+ VQ Q ERSQ KNKA+A LR+++Y LE QK + + KT + G Sbjct: 251 HVPTGITVQSQDERSQLKNKAKALTELRSRIYNLEHQKY--LDEVASRRKTMVSTGDRSA 308 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R + + VLDGDL + A Sbjct: 309 KIRTYNY-PQGRLTDHRIGLTLYNLQAVLDGDLKPIIDA 346 >gi|88608013|ref|YP_506293.1| peptide chain release factor 1 [Neorickettsia sennetsu str. Miyayama] gi|119361566|sp|Q2GE03|RF1_NEOSM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|88600182|gb|ABD45650.1| peptide chain release factor 1 [Neorickettsia sennetsu str. Miyayama] Length = 367 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 107/260 (41%), Positives = 159/260 (61%), Gaps = 9/260 (3%) Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 KLE+E K+ L + D+ + LEV AG GG E+ +A L MY ++AE+ K++ E + Sbjct: 93 KLELEIKRM-LLPKDKDDALNVMLEVRAGTGGDEAALFAASLFHMYQKYAERMKWRFEII 151 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 I E G K A I G + + LK E GVHR+ R+ +S R HTS +++ V P Sbjct: 152 SISHNEIGGYKEANASISGSDVFAKLKFESGVHRVQRVPETESAGRIHTSTATVAVLPEP 211 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 +D ++++I++ D RID YR+SG GGQ VNTTDSAVRITHIPTG+VV Q E+SQHKN+A+ Sbjct: 212 ED-VDVKINDKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNRAK 270 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332 A +LR +LYE+E K ++ I K++IG G + R+Y P + D R N+ Sbjct: 271 AMKVLRVRLYEIERNKVQQ--EISSMRKSQIGSGERSEKTRTYNF-PQGRITDHRINLTT 327 Query: 333 TSPSD-VLDGDLDDFMKATL 351 ++ V +G+L+ ++A + Sbjct: 328 YRINETVKEGELEPIIEALI 347 >gi|75762680|ref|ZP_00742519.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489826|gb|EAO53203.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 358 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ + +++E L+ E + +L D ND +EV Sbjct: 61 LKDAKAMLEEKLDAEMRDMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKRAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRXHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|187734557|ref|YP_001876669.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC BAA-835] gi|238691860|sp|B2UL99|RF1_AKKM8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|187424609|gb|ACD03888.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC BAA-835] Length = 358 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 123/343 (35%), Positives = 187/343 (54%), Gaps = 26/343 (7%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLILLELAL 77 QRL L T +P + + +A +MRE + L + + + +L DN ELA Sbjct: 12 QRLEELETVIAEPDFFNDQKKASEIMREHRRLKELMETWDSLNATEQQLADNQ---ELA- 67 Query: 78 EEDDCSI-------LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTE 129 + DD + + E L++++ +V+Y SLL + + DA +E+ AG GG E Sbjct: 68 KTDDPELAELAALEIPELEAALEKLRSDVQY----SLLPRDTTEDRDAIIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY R+AE+R ++ E LE + G K I G + +LK E GVHR Sbjct: 124 ASLFAGDLLRMYQRFAEERGWRFEHLESSPSDVGGFKEVVCRIAGEEVFRFLKYEGGVHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P ++ ++IEI D RI+ R+ GAGGQHVN T+SA Sbjct: 184 VQRVPATETQGRIHTSTATVAVMPEAEE-VDIEIRPEDLRIEVCRSGGAGGQHVNKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 V+I HIPTGV V+C++ERSQ KN+ + +LRAKL+ E +KREE + + IG G Sbjct: 243 VQIWHIPTGVYVRCEEERSQMKNREKGMKILRAKLF--EAKKREEAEKYSAARRNLIGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R + +L G L+D + A Sbjct: 301 GREEKIRTYNF-PQNRLTDHRIGYTSHNLDGILMGQLEDLIMA 342 >gi|85860527|ref|YP_462729.1| peptide chain release factor 1 [Syntrophus aciditrophicus SB] gi|119361624|sp|Q2LWU9|RF1_SYNAS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|85723618|gb|ABC78561.1| bacterial peptide chain release factor 1 (rf-1) [Syntrophus aciditrophicus SB] Length = 357 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 100/244 (40%), Positives = 146/244 (59%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSATLL 171 D + +LE+ AG GG E+ + L RMY R+AE R++K E + G K Sbjct: 105 DDRNVFLEIRAGTGGDEAGLFVGDLFRMYARYAEMRRWKVEVISSTPSSGVGGFKEIIAS 164 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G AY LK E GVHR+ R+ ++ R HTS ++ + P D+ +E+ I +D RID Sbjct: 165 IAGQGAYSQLKYESGVHRVQRVPVTEAQGRIHTSAVTVAIMPEADE-VEVTIDPNDLRID 223 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 + +SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNKA+A +LRA+L ++ ++K Sbjct: 224 VFHSSGHGGQSVNTTDSAVRITHLPTGLVVSCQDEKSQLKNKAKALKVLRARLLDIMVKK 283 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + I E+ K+++G G +IR+Y P V D R + S ++L GD+ +F+ Sbjct: 284 QSD--EISEARKSQVGSGDRSERIRTYNF-PQGRVTDHRVGLTLYSLENILGGDIQEFID 340 Query: 349 ATLA 352 A A Sbjct: 341 ALTA 344 >gi|239787352|emb|CAX83829.1| Peptide chain release factor RF-1 [uncultured bacterium] Length = 354 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 105/244 (43%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D A LE+ AG GG E+ +A L+RMY R+A ++ + L + + +K A + I Sbjct: 103 DERSAILEIRAGTGGDEAGLFAADLMRMYQRYAAIHGWQFDVLGLSETGLGSVKEAQVGI 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + LK E GVHR+ R+ +S+ R HTS +++ V P V+D ++IEI + D RID Sbjct: 163 VGKGVFAKLKFESGVHRVQRVPETESSGRVHTSAATVAVLPEVED-VDIEIKDEDLRIDI 221 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVNTTDSAVR+TH+PTG+VV Q ERSQHKNKA+A ++RA+LY +L+KR Sbjct: 222 CRASGAGGQHVNTTDSAVRLTHLPTGLVVAQQDERSQHKNKAKAMKIMRARLY--DLRKR 279 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 E+ K+++G G +IR+Y P V D R N+ V+ G+ LD+ + Sbjct: 280 EQDEVRAADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDQVMQGEALDELID 338 Query: 349 ATLA 352 +A Sbjct: 339 NLIA 342 >gi|21672454|ref|NP_660521.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009047|sp|Q8K9X0|RF1_BUCAP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21623068|gb|AAM67732.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 361 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/236 (43%), Positives = 139/236 (58%), Gaps = 8/236 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + ++E+ A GG ES +A L RMYTR+AE +KTE + + E G K + Sbjct: 107 DQHSCFIEIRAATGGDESSIFAGELFRMYTRYAENYMWKTEIMSSSENERGGFKEIIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A G LK E G HR+ R+ +S R HTS ++ + PV + + EI SD +IDT Sbjct: 167 TGKGACGRLKFESGGHRVQRVPETESQGRIHTSTCTVAIMPVRPKTKKEEIKVSDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSA+RITHIP+G VV+CQ ERSQHKNKA+A ++L A++Y +L K Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPSGNVVECQDERSQHKNKAKALSILSARVYADKLAKS 286 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQM----VKDLRTNIEKTSPSDVLDGDLD 344 ++ SS I G RS + Y + D R N+ ++VL G LD Sbjct: 287 QK----ENSSMRRILLGTGERSDRNRTYNFAQNRITDHRINLTIYKLNEVLQGKLD 338 >gi|310659436|ref|YP_003937157.1| peptide chain release factor rf-1 [Clostridium sticklandii DSM 519] gi|308826214|emb|CBH22252.1| peptide chain release factor RF-1 [Clostridium sticklandii] Length = 356 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 151/242 (62%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A +L RMY+ +A +++K E + +D G K +I Sbjct: 106 DDKNVIVEIRAGAGGDEAALFAGVLFRMYSMYASSKRWKVELMSSNDTGVGGYKEVVFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +S R HTS +++ V P V++ E+E++ +D R+D Sbjct: 166 IGKGAYSRLKFESGVHRVQRVPETESAGRIHTSTATVAVLPEVEEVGEVELNLNDVRVDV 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ KNK +A+ +LRAKLY++EL+K Sbjct: 226 FRSSGNGGQSVNTTDSAVRLTHVPTGIVISMQDEKSQLKNKEKAFKILRAKLYDIELEKA 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + K+++G G +IR+Y P + D R + L+GDLD+ + A Sbjct: 286 QK--EVARERKSQVGTGDRSERIRTYNY-PQGRITDHRIGVTLYKLDAFLNGDLDEMVDA 342 Query: 350 TL 351 + Sbjct: 343 LI 344 >gi|296282001|ref|ZP_06859999.1| peptide chain release factor 1 [Citromicrobium bathyomarinum JL354] Length = 355 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 136/223 (60%), Gaps = 9/223 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ AG GG E+ +A L RMY R+A ++ +K E + + E G K Sbjct: 103 ADAKPAMLEIRAGTGGDEAALFAGDLYRMYERFAGEQGWKVEPVSMSASEVGGFKEIVAH 162 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +S R HTS +++ V P D+ +++++ D +ID Sbjct: 163 VTGTGVFAKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEPDE-VDVQVDPGDLKID 221 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYRASGAGGQHVNTTDSA+RITH+PTG+VV CQ RSQHKN+ QA +LRA+LYE Q+ Sbjct: 222 TYRASGAGGQHVNTTDSAIRITHLPTGLVVTCQDGRSQHKNREQAMQVLRARLYE---QQ 278 Query: 292 REEIANI-GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 R+ E+ K +G G +IR+Y P V D R + Sbjct: 279 RDAAQGAEAEARKAMVGSGDRSERIRTYNF-PQGRVTDHRIGL 320 >gi|315651889|ref|ZP_07904892.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986] gi|315485891|gb|EFU76270.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986] Length = 356 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 96/243 (39%), Positives = 148/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGAGG E+ +A L RMY +AE + +K E +++++ G K ++ Sbjct: 105 DDKNIMLEIRAGAGGDEAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMV 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +S R HTS +S+ V P ++ ++++I +D RID Sbjct: 165 SGKGAYSKLKYESGVHRVQRVPETESGGRIHTSTASVAVMPEAEE-VDVQIDMNDVRIDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYE+EL+K+ Sbjct: 224 MRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQLQNKEKAFTLLRSKLYEIELEKK 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +++IG G +IR+Y P V D R N+ +++GD+ + + Sbjct: 284 QSAE--AADRRSQIGTGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQELIDG 340 Query: 350 TLA 352 +A Sbjct: 341 CIA 343 >gi|120405293|ref|YP_955122.1| peptide chain release factor 1 [Mycobacterium vanbaalenii PYR-1] gi|166223576|sp|A1TD66|RF1_MYCVP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119958111|gb|ABM15116.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium vanbaalenii PYR-1] Length = 357 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 128/336 (38%), Positives = 173/336 (51%), Gaps = 9/336 (2%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP L + AK + R + +S +++ D ELA DD S Sbjct: 18 LEQRLADPELHADPAAAKKVGRRFAQISPIVSTYHKLEAARGDLEAARELAA--DDASFA 75 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + ++ + D++D LEV +G GG ES +A L RMY R+A Sbjct: 76 AEVDELTTKVADLDDRLTDLLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIRYA 135 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRISPYDSNS 200 E+ + L + G K ATL I KG +A G W LK E GVHR+ R+ +S Sbjct: 136 ERHGWTVTMLGETTSDLGGYKDATLSIAGKGDSADGVWSRLKFEGGVHRVQRVPVTESQG 195 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS + + VYP D+ +++I ESD RID YR+SG GGQ VNTTDSAVRITH+PTG+V Sbjct: 196 RVHTSAAGVLVYPEPDEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIV 255 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 V CQ ERSQ +NKA+A +L A+L L E Q + + S + +IR+Y P Sbjct: 256 VTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRSERIRTYNY-P 314 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + D R N + + VLDGDLD A A K Sbjct: 315 ENRIADHRINYKSHNLDQVLDGDLDPLFDALAAADK 350 >gi|220905560|ref|YP_002480872.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254790877|sp|B8J4R4|RF1_DESDA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219869859|gb|ACL50194.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 356 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 175/327 (53%), Gaps = 18/327 (5%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETS 89 P ++ + + + L + L + + + + + L +N +LL ++D I Sbjct: 22 PDVFNDQDQYRKLTKAHADLSDVVELFRRHRAVSEELAENRLLLH----DEDPEIRAMAQ 77 Query: 90 DNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + + R + E+ + E L S D + LE+ AG GG E+ +A L RMYTR+A Sbjct: 78 EEVHRGEAELPNLEHELKVMLLPSDPLDEKNTILEIRAGTGGEEAALFAADLFRMYTRYA 137 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + +K E + E G K LI G Y LK E G HR+ R+ ++ R HTS Sbjct: 138 ELKNWKVEIMSESPSENGGYKEIICLIAGDRVYSHLKFEAGTHRVQRVPATEAQGRIHTS 197 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 +++ V P ++ +++EI D RID YRASGAGGQHVN T+SAVRITH+PT VV CQ Sbjct: 198 AATVAVMPEAEE-VDVEIRPEDLRIDIYRASGAGGQHVNKTESAVRITHLPTNTVVTCQD 256 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 ERSQHKNKA+A +L +++ L ++ + + + K ++G G +IR+Y P Sbjct: 257 ERSQHKNKARAMKVLASRI--LAAERERQSSELSADRKAQVGSGDRSERIRTYNF-PQGR 313 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKA 349 D R N+ S +++G+L+ ++A Sbjct: 314 CTDHRINLTLYSLDRIMEGELESLVEA 340 >gi|28199883|ref|NP_780197.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1] gi|71899967|ref|ZP_00682113.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1] gi|182682635|ref|YP_001830795.1| peptide chain release factor 1 [Xylella fastidiosa M23] gi|32129935|sp|Q87A17|RF1_XYLFT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238691124|sp|B2IA85|RF1_XYLF2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|28058004|gb|AAO29846.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1] gi|71730254|gb|EAO32339.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1] gi|182632745|gb|ACB93521.1| peptide chain release factor 1 [Xylella fastidiosa M23] gi|307578915|gb|ADN62884.1| peptide chain release factor 1 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 361 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 98/239 (41%), Positives = 146/239 (61%), Gaps = 7/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMYTR+AE++++K E GE G K I Sbjct: 107 DECNLFLEVRAGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P D+ +I I+ +D +IDT Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+PTGVVV+ Q ERSQH N+ +A L+A+L +E Q+ Sbjct: 227 FRSSGAGGQHVNKTESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQL--IESQRS 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347 ++ + K ++G G ++IR+Y P + D R N+ ++++GDLD + Sbjct: 285 QQATAEAMTRKLQVGSGDRSQRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLI 342 >gi|302785656|ref|XP_002974599.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii] gi|300157494|gb|EFJ24119.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii] Length = 386 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 123/323 (38%), Positives = 180/323 (55%), Gaps = 27/323 (8%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFE 105 +E + LD ++ IK ++ + + + L EL E +D + + S LQ EV Q + Sbjct: 53 KELRKLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHD 112 Query: 106 SLLS----GEADSNDAYLEVHA--------GAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 LL EADS LE GAGG E+ +A+ L +MY ++A ++ E Sbjct: 113 VLLKLIPKDEADSRGCILEASCLICFIYLLGAGGDEASIFASDLFKMYEKYAANNSWRFE 172 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 L I + G K A+ +I G + YG LK E GVHR+ R+ + R HTS +S+ + P Sbjct: 173 VLSITTTDTRGYKEASAVISGDDVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILP 232 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 ++ +++EI + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV Q ERSQHKNK Sbjct: 233 EANE-VDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNK 291 Query: 274 AQAWNMLRAKLYELELQK----REEIA--NIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 A+A ++L A+LYELE + R E+ IG S ++E +IR+Y P V D R Sbjct: 292 AKALSILYARLYELERSRAAASRSELRQDQIGSSDRSE-----RIRTYNF-PQGRVTDHR 345 Query: 328 TNIEKTSPSDVLDG-DLDDFMKA 349 + + S +++G L+ F+ A Sbjct: 346 VGVTQHSIEQIMEGIGLEIFVNA 368 >gi|284039842|ref|YP_003389772.1| peptide chain release factor 1 [Spirosoma linguale DSM 74] gi|283819135|gb|ADB40973.1| peptide chain release factor 1 [Spirosoma linguale DSM 74] Length = 357 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 100/239 (41%), Positives = 146/239 (61%), Gaps = 7/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + LE+ G GG E+ +A + RMY R+ EK ++ ++ +G G K I Sbjct: 106 DSKNVILEIRGGTGGDEAAIFAGDIFRMYQRFCEKMGWRMSLVDFTEGTSGGYKEIITEI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ +++EI+ +D R DT Sbjct: 166 EGEDVYGKLKFESGVHRVQRVPATETQGRIHTSAASVAVLPEAEE-VDVEINMNDIRKDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+THIPTG+VVQCQ ERSQ KN +A +LR++LYE+ELQK Sbjct: 225 FCSSGAGGQSVNTTYSAVRLTHIPTGLVVQCQDERSQLKNFDKALTVLRSRLYEIELQKH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + I KT +G G +IR+Y P V D R + + V+DG + +F++ Sbjct: 285 NDA--IASQRKTMVGSGDRSDKIRTYNY-PQSRVTDHRIGLTVYNLPSVMDGGIGEFIE 340 >gi|84516322|ref|ZP_01003682.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53] gi|84510018|gb|EAQ06475.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53] Length = 351 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 124/340 (36%), Positives = 178/340 (52%), Gaps = 24/340 (7%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R FL K D ++ L RE L + + +D L +I + L++ Sbjct: 11 IDRFRFLEAKMSDAAHGGDI---AALGREYAELRPVVDTVTAYKDLLA-QMIDTQALLKD 66 Query: 80 DDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 + L E D L +K + Q L AD+ A LE+ G GG E+ +A Sbjct: 67 PEMRALAE--DELPELKAALAASEHAVQLALLPKDAADARPALLEIRPGTGGDEASLFAG 124 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LLRMY R+AE ++ E LE E GIK + G + LK E GVHR+ R+ Sbjct: 125 DLLRMYQRYAENMGWRFEILEQSQTELGGIKEVVARVAGEGVFARLKYESGVHRVQRVPE 184 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ V P D ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRI HI Sbjct: 185 TESGGRIHTSAATVAVLPEAQD-VDIQINPNDLRIDTMRASGSGGQHVNTTDSAVRILHI 243 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIGWG--- 309 PTG++V E+SQH+N+ A +L+ +L++LE Q+ + GE S K ++G G Sbjct: 244 PTGLIV-VSAEKSQHRNREIAMQVLKTRLFDLERQRID-----GERSADRKAQVGSGDRS 297 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R N+ S V+ GDLD + A Sbjct: 298 ERIRTYNF-PQGRLTDHRINLTLYSLGQVMAGDLDTIIDA 336 >gi|254521606|ref|ZP_05133661.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14] gi|219719197|gb|EED37722.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14] Length = 360 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 147/240 (61%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY R+AE++ +K E + GE G K + Sbjct: 107 DEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEIESDNPGEHGGYKEVVARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A+ LK E G HR+ R+ +S R HTS +++ + P D+ +I I+ +D ++DT Sbjct: 167 VGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPETDEVDDIVINPADLKVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH N+ +A L+A+L + E Q++ Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHANRDKAMKRLKAQLLDAERQRQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348 + A ES + ++G G ++IR+Y P + D R + ++L GDLD ++ Sbjct: 287 D--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRVEGLTLYDLPNILAGDLDPLLQ 343 >gi|167041273|gb|ABZ06029.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine microorganism HF4000_005D21] gi|167045778|gb|ABZ10424.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine bacterium HF4000_APKG3108] Length = 358 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 99/239 (41%), Positives = 146/239 (61%), Gaps = 7/239 (2%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L + EADS +A LE+ AG GG E+ + L +MY R +K+ E + + E G K Sbjct: 101 LPNDEADSKNAILEIRAGTGGLEATLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFK 160 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 LLIKG N Y +LK E GVHR+ R+ ++ R HTS +++ V P ++ ++++I+E Sbjct: 161 EVILLIKGTNIYSFLKFESGVHRVQRVPETETQGRVHTSAATVAVLPEAEE-VDVKINEK 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID +R+SG GGQ VNTTDSAVRITH+PTG+ V Q E+SQHKN+A+A +LR+++Y+ Sbjct: 220 DLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIAVSQQDEKSQHKNRAKAMKILRSRVYD 279 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 E + ++ + K +IG G +IR+Y P V D R N+ + L+GD Sbjct: 280 AE--REKKDKKRSKDRKNQIGSGDRSERIRTYNF-PQSRVTDHRINLTIHKLQEFLNGD 335 >gi|224477106|ref|YP_002634712.1| peptide chain release factor 1 [Staphylococcus carnosus subsp. carnosus TM300] gi|254790897|sp|B9DMD1|RF1_STACT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|222421713|emb|CAL28527.1| peptide chain release factor 1 [Staphylococcus carnosus subsp. carnosus TM300] Length = 358 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 116/354 (32%), Positives = 189/354 (53%), Gaps = 31/354 (8%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + ++ + D Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVSDSNKLREYSKEQSDLQKTVDVYRQYKQNKEDIDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG----------EADSND---AY 118 ++E+ L ETSD + L+ + + + L G D ND Sbjct: 61 IVEM---------LSETSDKEEVDMLKADMNELKDTLPGLEEELKMLLIPKDPNDDKNVV 111 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ A AGG E+ +A L RMYTR++E +KT +E++D + G K + I G AY Sbjct: 112 VEIRAAAGGDEAAIFAGDLYRMYTRFSEGLGYKTGVIEMNDSDHGGFKEISFTINGQGAY 171 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E G HR+ R+ +S R HTS +++ V P +D +E++I ++D +I+TYR+SGA Sbjct: 172 SKLKYENGAHRVQRVPETESGGRIHTSTATVAVLPEAED-VEVDIKDADLKIETYRSSGA 230 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAVRITH+PTG++ E+SQ +N+ +A +L+A++Y+++LQ+ +E Sbjct: 231 GGQHVNTTDSAVRITHLPTGIIA-TSSEKSQIQNREKALKVLKARVYDMKLQEEQE--KY 287 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K+ +G G +IR+Y P V D R + +++G LD+ + A Sbjct: 288 DSERKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLDEIIDA 340 >gi|282882091|ref|ZP_06290732.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B] gi|281298121|gb|EFA90576.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B] Length = 358 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 112/306 (36%), Positives = 176/306 (57%), Gaps = 26/306 (8%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSN 115 K+ ++ L D+ LL L++D ++++ NL++I+ +++ +L D N Sbjct: 52 KKTKENLNDSKALLAEKLDDDMKDLVKDDISTNEKNLEKIEEDLK------ILLIPKDPN 105 Query: 116 D---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +E+ AGAGG E+ +A L R Y R+AE+ +K + + ++ G K +I Sbjct: 106 DKKNVMVEIRAGAGGDEAALFAGTLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +S R HTS +++ V P V+D +E+EI ++ + D Sbjct: 166 IGRGAYSRLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEVED-VEVEIDPTEIKFDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSAVR+THIPTG+V+ CQ E+SQ NK +A +LRAKLY+L++Q++ Sbjct: 225 FRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQ 284 Query: 293 EE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E ++ +G ++E +IR+Y P V D R N + DG+LD+ Sbjct: 285 NEKNSAQRLSQVGTGDRSE-----RIRTYNY-PQGRVTDHRINYTTHQIVSINDGELDEL 338 Query: 347 MKATLA 352 + A A Sbjct: 339 IDALTA 344 >gi|311745348|ref|ZP_07719133.1| peptide chain release factor 1 [Algoriphagus sp. PR1] gi|126577889|gb|EAZ82109.1| peptide chain release factor 1 [Algoriphagus sp. PR1] Length = 358 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 145/240 (60%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS D LE+ G+GG E+ +A L RMY R+ E + +K L++ G G K + Sbjct: 106 DSKDCILEIRGGSGGDEASIFAGDLFRMYERFCEMQGWKLTVLDLTFGSAGGYKEIIATV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ +S R HTS +S+ V P +D+ +E+ + +D R DT Sbjct: 166 SGADVYGMLKYESGVHRVQRVPATESQGRVHTSAASVAVLPEMDE-VEVHLDMNDVRKDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y +SG GGQ VNTT SAVR+TH PTG+VV CQ E+SQ KN +A +LR++LYE+EL K Sbjct: 225 YCSSGPGGQSVNTTYSAVRLTHNPTGLVVTCQDEKSQIKNFEKALKVLRSRLYEIELAKH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E ++G K+ +G G +IR+Y + V D R N + DV+DG +++F+ A Sbjct: 285 NE--SVGAQRKSMVGSGDRSDKIRTYNYSQSR-VTDHRINKTVYNLPDVMDGHIEEFISA 341 >gi|295105440|emb|CBL02984.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium prausnitzii SL3/3] Length = 361 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 119/346 (34%), Positives = 188/346 (54%), Gaps = 19/346 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R L+ + P + + LMRE + + ++ Q L D+L + Sbjct: 8 MDAVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTAL-DHLAQAKA 66 Query: 76 ALEEDDC-------SILQETSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126 LEE I QE S+ Q + KLE K LL + D + +E+ +GAG Sbjct: 67 LLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKIL--LLPKDVNDGKNVIMEIRSGAG 124 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A+ LLRMYT +A+ R + E L +++ E G+K A + + G AY LK E G Sbjct: 125 GEEAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNRLKYESG 184 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +++ V P ++ ++ + D RIDT+R+SGAGGQH+N T Sbjct: 185 VHRVQRVPETETQGRIHTSTATVAVMPQAEE-VDFALDMKDLRIDTFRSSGAGGQHINKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SA+R+THIPTG VV+CQ ERSQ +NK +A +LR++L L +++E+ I + ++ Sbjct: 244 SSAIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINAQRQGQV 301 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G +IR+Y P D R + + ++DG+LD+ + A Sbjct: 302 GTGDRSEKIRTYNF-PQDRCTDHRIGLTVHNLEKIMDGNLDEVIDA 346 >gi|285017297|ref|YP_003375008.1| peptide chain release factor 1 (rf-1) protein [Xanthomonas albilineans GPE PC73] gi|283472515|emb|CBA15020.1| probable peptide chain release factor 1 (rf-1) protein [Xanthomonas albilineans] Length = 361 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 149/242 (61%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY R+AE++ +K E + GE G K I Sbjct: 107 DDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKVEVESDNPGEHGGYKEIVARI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P DD EI ++ +D +IDT Sbjct: 167 VGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADDVEEIAVNPADLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQH N+ +A L+A+L L+ ++ Sbjct: 227 FRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQHANRDKALKRLKAQL--LDAERN 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD---VLDGDLDDF 346 ++ A + K ++G G ++IR+Y P + D R +E + D V++GDLD Sbjct: 285 KQAAAEAQDRKLQVGSGDRSQRIRTYNF-PQGRITDHR--VEGLTLYDLPHVIEGDLDAL 341 Query: 347 MK 348 ++ Sbjct: 342 IE 343 >gi|300117843|ref|ZP_07055610.1| peptide chain release factor 1 [Bacillus cereus SJ1] gi|298724707|gb|EFI65382.1| peptide chain release factor 1 [Bacillus cereus SJ1] Length = 358 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 124/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNDVLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ D +++E L+ E + +L D ND +EV Sbjct: 61 LKDAKAMLEDKLDADMREMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|254451602|ref|ZP_05065039.1| peptide chain release factor 1 [Octadecabacter antarcticus 238] gi|198266008|gb|EDY90278.1| peptide chain release factor 1 [Octadecabacter antarcticus 238] Length = 344 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 104/242 (42%), Positives = 144/242 (59%), Gaps = 14/242 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ G GG E+ +A LLRMY R+AE R + E LE E GIK T Sbjct: 94 ADGKPALLEIRPGTGGDEAALFAADLLRMYQRYAENRGWTFEILEESQSELGGIKEVTAR 153 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G N + +K E GVHR+ R+ +S R HTS +++ V P +D ++I+I+ +D RID Sbjct: 154 IAGNNVFARMKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIQINANDIRID 212 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASG+GGQHVNTTDSAVRITH+P+G+VV E+SQH+N+ A +L+ +LY+ E QK Sbjct: 213 TMRASGSGGQHVNTTDSAVRITHMPSGIVV-TSSEKSQHRNREIAMQVLKTRLYDAERQK 271 Query: 292 ------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + A +G ++E +IR+Y P + D R N+ VL GDLD+ Sbjct: 272 VHDERSADRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDAVLQGDLDE 325 Query: 346 FM 347 + Sbjct: 326 VI 327 >gi|326318376|ref|YP_004236048.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375212|gb|ADX47481.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 360 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 104/259 (40%), Positives = 151/259 (58%), Gaps = 9/259 (3%) Query: 95 IKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 ++LE E ++ LL + D + +A+LE+ AG GG ES +A L RMYTR+A +K E Sbjct: 90 VQLEDELQRL--LLPRDPDEARNAFLEIRAGTGGDESALFAGDLARMYTRYAATAGWKVE 147 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 L D E G K L ++G YG L+ E G HR+ R+ ++ R HTS ++ V P Sbjct: 148 ILSASDNEIGGYKEVVLRVEGDGVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMP 207 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D+ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H+PTG+V +CQ RSQH NK Sbjct: 208 EPDEQQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNK 267 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 A+A +L+A++ E E + E A K +G G +IR+Y P + D R N+ Sbjct: 268 AKALQVLQARIQEKE--RSERAAKEAALRKGLVGSGDRSDRIRTYNF-PQGRLTDHRINL 324 Query: 331 EKTSPSDVLDGDLDDFMKA 349 +++GDL + + A Sbjct: 325 TLYKLLAIMEGDLGEVLDA 343 >gi|160945367|ref|ZP_02092593.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii M21/2] gi|158443098|gb|EDP20103.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii M21/2] Length = 361 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 119/346 (34%), Positives = 188/346 (54%), Gaps = 19/346 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R L+ + P + + LMRE + + ++ Q L D+L + Sbjct: 8 MDAVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTAL-DHLAQAKA 66 Query: 76 ALEEDDC-------SILQETSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126 LEE I QE S+ Q + KLE K LL + D + +E+ +GAG Sbjct: 67 LLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKIL--LLPKDVNDGKNVIMEIRSGAG 124 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A+ LLRMYT +A+ R + E L +++ E G+K A + + G AY LK E G Sbjct: 125 GEEAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNRLKYESG 184 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +++ V P ++ ++ + D RIDT+R+SGAGGQH+N T Sbjct: 185 VHRVQRVPETETQGRIHTSTATVAVMPQAEE-VDFALDMKDLRIDTFRSSGAGGQHINKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SA+R+THIPTG VV+CQ ERSQ +NK +A +LR++L L +++E+ I + ++ Sbjct: 244 SSAIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINAQRQGQV 301 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G G +IR+Y P D R + + ++DG+LD+ + A Sbjct: 302 GTGDRSEKIRTYNF-PQDRCTDHRIGLTVHNLEKIMDGNLDEVIDA 346 >gi|224417848|ref|ZP_03655854.1| peptide chain release factor 1 [Helicobacter canadensis MIT 98-5491] gi|253827187|ref|ZP_04870072.1| peptide chain release factor 1 [Helicobacter canadensis MIT 98-5491] gi|313141390|ref|ZP_07803583.1| peptide chain release factor 1 [Helicobacter canadensis MIT 98-5491] gi|253510593|gb|EES89252.1| peptide chain release factor 1 [Helicobacter canadensis MIT 98-5491] gi|313130421|gb|EFR48038.1| peptide chain release factor 1 [Helicobacter canadensis MIT 98-5491] Length = 356 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 122/315 (38%), Positives = 178/315 (56%), Gaps = 20/315 (6%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K++ + +Q+L N S E L D+ L +LA EE ++E L+ LE E K Sbjct: 44 KLVQKSKQYLKNLESI--EENKGLLDDKELGDLAKEE-----IKEAE--LENQNLESEIK 94 Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 LL + D + YLE+ AG GG E+ + L + Y R+AE + +K E + + Sbjct: 95 IL--LLPKDPNDEKNIYLELRAGTGGDEAGIFVGDLFKAYIRYAESKGWKVEIISSSENN 152 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K LIKG AY LK E G HR+ R+ +S R HTS ++ + P VDD +E+ Sbjct: 153 VGGYKEVIALIKGKGAYSRLKFEGGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEV 211 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 I+ +D RI+ +RA G GGQ VNTTDSAVRITHIPTG+ V Q E+SQHKNK +A +L+ Sbjct: 212 VINPNDLRIEVFRAGGHGGQCVNTTDSAVRITHIPTGISVSMQDEKSQHKNKDKALKILK 271 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 A++YE EL+ + E E+ K+++G G +IR+Y P + D R + S ++ Sbjct: 272 ARIYEAELEAQME--QNAEARKSQVGSGDRSERIRTYNY-PQNRLSDHRIGLTLYSLEEI 328 Query: 339 -LDGDLDDFMKATLA 352 L+GDLD ++ +A Sbjct: 329 MLNGDLDQVIEPIIA 343 >gi|15616337|ref|NP_244642.1| peptide chain release factor 1 [Bacillus halodurans C-125] gi|20139353|sp|Q9K6F4|RF1_BACHD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|10176399|dbj|BAB07494.1| peptide chain release factor 1 in translation [Bacillus halodurans C-125] Length = 356 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 115/338 (34%), Positives = 185/338 (54%), Gaps = 11/338 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELAL 77 +R LN DP + + + + +E+ ++ + +E + D+ D +LE L Sbjct: 10 ERYERLNELLSDPEVISDSNKLREYSKEQADMEETVQVYREYKTVMDQYQDAKEMLEDKL 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136 +++ ++++E D L K ++E K LL + D + +EV AGG E+Q +A Sbjct: 70 DDEMYAMVKEEIDELATRKEDLEAKLKVLLLPKDPNDDKNVIVEVRGAAGGDEAQLFAAD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L +MY R+AE + +K E +E E G K + G AY LK E G HR+ R+ Sbjct: 130 LYKMYARYAEAQGWKIEVIEASSTELGGYKEIIFSVNGKGAYSKLKYENGAHRVQRVPQT 189 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+P Sbjct: 190 ESGGRIHTSTATVAVLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLP 248 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K+ +G G +IR Sbjct: 249 TGIVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDQTRKSAVGTGDRSERIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +Y P V D R + +L G LD+ +++ + Sbjct: 307 TYNF-PQSRVTDHRIGLTLQKLEQILQGKLDEIIESLI 343 >gi|197120070|ref|YP_002140497.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem] gi|197089430|gb|ACH40701.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem] Length = 359 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 117/325 (36%), Positives = 178/325 (54%), Gaps = 24/325 (7%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + N E + L +E L ++ +E + L D EL E D QE + Sbjct: 23 DPEVLGNQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEPD-----QEMREM 77 Query: 92 LQRIKLEVEYKQFESLLSGE-------ADSND---AYLEVHAGAGGTESQDWANMLLRMY 141 Q L +E ++ +L GE D ND LE+ AG GG ES +A L RMY Sbjct: 78 AQAELLSLEARR--EVLEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMY 135 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 +R+AE +++ E + + E+ G K L++G + LK E G HR+ R+ ++ R Sbjct: 136 SRFAETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGR 195 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS ++ V P +D ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV Sbjct: 196 IHTSACTVAVMPEAED-VDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVV 254 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 CQ+ERSQ KN+A+A +L++++ L+ E+ A + K+++G G +IR+Y Sbjct: 255 ACQEERSQIKNRAKAMKVLKSRI--LDNIVMEQNAKLAADRKSQVGSGDRSERIRTYNF- 311 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDL 343 P + D R + ++ GD+ Sbjct: 312 PQGRMTDHRIGLTLYRLDAIMAGDI 336 >gi|227503858|ref|ZP_03933907.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940] gi|227199481|gb|EEI79529.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940] Length = 358 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 113/288 (39%), Positives = 167/288 (57%), Gaps = 15/288 (5%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132 E+A E+ D Q+ D L+ + +E+E K + L E DS D +E+ AGAGG E+ Sbjct: 66 EMAYEDHD---FQDEVDRLEPLVVELEEKLADLLAPRDEHDSEDIIMEIKAGAGGEEAAL 122 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-----NAYGWLKGEQGV 187 +A L RMY R+A+K F+ E L +++ + G+K ++ K A+ K E GV Sbjct: 123 FAGDLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEGGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R TS + + VYP D+ + I E D R+D YR+SG GGQ VNTTD Sbjct: 183 HRVQRVPVTESQGRIQTSAAGVLVYPEPDEVESVNIDEKDLRVDVYRSSGKGGQGVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306 SAVRITH+PTG+VV CQ+ERSQ +NKA+A +L+A+L ++E + RE A GE +++ Sbjct: 243 SAVRITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQIEREARE--AEAGEQRASQVR 300 Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R + + VL+GD+ D + A A Sbjct: 301 TLDRSERIRTYNW-PENRITDHRIGYKANNLDAVLNGDMQDLITALQA 347 >gi|149174661|ref|ZP_01853286.1| peptide chain release factor 1 [Planctomyces maris DSM 8797] gi|148846355|gb|EDL60693.1| peptide chain release factor 1 [Planctomyces maris DSM 8797] Length = 360 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 121/338 (35%), Positives = 181/338 (53%), Gaps = 12/338 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R L + +DP + N + + RE L ++E R D + E+ EE D Sbjct: 12 RYEELEKELQDPEVLANTSKLVEIQREYGGLAKVALAVREFNTRAEDIEVAREMLEEETD 71 Query: 82 CSILQETSDNLQRIKLEVE--YKQFESLL-SGEADSNDAY-LEVHAGAGGTESQDWANML 137 + + L + E E K+ E L+ +G++ + +E+ AGAGG E+ +A L Sbjct: 72 PAAREYAQKELDELCEEHEKHIKELEDLVVAGDSITRGGLIMEIRAGAGGDEAALFAREL 131 Query: 138 LRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 MY + E +K +KTE L + E G+K T I G AY L+ E G HR+ R+ Sbjct: 132 FDMYMHFVEAQKGWKTEVLNMSATELGGLKEVTFSIAGEGAYHRLQFESGGHRVQRVPET 191 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P + +E++I D R+DT+ ASG GGQ VN T+SAVRITH+P Sbjct: 192 ETQGRVHTSAATVAVLPEASE-VEVDIKPDDIRLDTFHASGPGGQKVNKTESAVRITHLP 250 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG VVQCQ E+SQHKNKA+A +LR+++ E QK + + +T IG G ++IR Sbjct: 251 TGTVVQCQDEKSQHKNKAKAMRVLRSRVLEQMQQKAAD--ERADQRRTLIGSGDRSQRIR 308 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +Y P V D R N+ ++ GDL+D + A L Sbjct: 309 TYNF-PQGRVTDHRINLSLYKIDQIMQGDLNDLISALL 345 >gi|229164277|ref|ZP_04292210.1| Peptide chain release factor 1 [Bacillus cereus R309803] gi|228619217|gb|EEK76110.1| Peptide chain release factor 1 [Bacillus cereus R309803] Length = 358 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 123/350 (35%), Positives = 186/350 (53%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ + +++E L+ E+ + +L D ND +EV Sbjct: 61 LKDAKAMLEDKLDAEMREMVKEEVSELEGQDKELSARL--KILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|254438684|ref|ZP_05052178.1| peptide chain release factor 1 [Octadecabacter antarcticus 307] gi|198254130|gb|EDY78444.1| peptide chain release factor 1 [Octadecabacter antarcticus 307] Length = 344 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 103/242 (42%), Positives = 144/242 (59%), Gaps = 14/242 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ G GG E+ +A LLRMY R+AE R + E LE E GIK T Sbjct: 94 ADGKPALLEIRPGTGGDEAALFAGDLLRMYQRYAESRGWTFEILEESQSELGGIKEVTAR 153 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G N + +K E GVHR+ R+ +S R HTS +++ V P +D ++I+I+ +D RID Sbjct: 154 IAGNNVFARMKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIQINANDIRID 212 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASG+GGQHVNTTDSAVRITH+P+G+VV E+SQH+N+ A +L+ +LY+ E QK Sbjct: 213 TMRASGSGGQHVNTTDSAVRITHMPSGIVV-TSSEKSQHRNREIAMQVLKTRLYDAERQK 271 Query: 292 ------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + A +G ++E +IR+Y P + D R N+ +L GDLD+ Sbjct: 272 VHDERSADRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDAILQGDLDE 325 Query: 346 FM 347 + Sbjct: 326 VI 327 >gi|242309130|ref|ZP_04808285.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489] gi|239524171|gb|EEQ64037.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489] Length = 356 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 119/317 (37%), Positives = 179/317 (56%), Gaps = 24/317 (7%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K++ + +Q+L N S E L D+ L +LA EE ++E Q ++ E++ Sbjct: 44 KLVQKSKQYLQNLQSI--EENKSLLDDKELGDLAKEE-----IKEAEAQNQELESEIK-- 94 Query: 103 QFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 +L D ND YLE+ AG GG E+ + L + Y R+AE + +K E + ++ Sbjct: 95 ----VLLLPKDPNDEKNIYLELRAGTGGDEAGIFVGDLFKAYVRYAESKGWKVEIISSNE 150 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G K LIKG AY LK E G HR+ R+ +S R HTS ++ + P VDD + Sbjct: 151 NNFGGYKEVIALIKGKGAYSRLKYEGGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-V 209 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 E+ I+ +D +I+ +RA G GGQ VNTTDSAVRITHIPTG+ V Q E+SQHKNK +A + Sbjct: 210 EVVINPNDLKIEVFRAGGHGGQCVNTTDSAVRITHIPTGISVSMQDEKSQHKNKDKALKI 269 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336 L+A++YE EL+ + E E+ K+++G G +IR+Y P + D R + S Sbjct: 270 LKARIYEAELEAQME--QNAEARKSQVGSGDRSERIRTYNY-PQNRLSDHRIGLTLYSLE 326 Query: 337 DV-LDGDLDDFMKATLA 352 ++ L+GDLD ++ +A Sbjct: 327 EIMLNGDLDQVIEPIIA 343 >gi|260576769|ref|ZP_05844754.1| peptide chain release factor 1 [Rhodobacter sp. SW2] gi|259021021|gb|EEW24332.1| peptide chain release factor 1 [Rhodobacter sp. SW2] Length = 351 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 125/344 (36%), Positives = 188/344 (54%), Gaps = 18/344 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R FL K E L RE L ++ I + R D+L E Sbjct: 7 LDQISRRFEFLEAKLA---AGAGHAEIASLSREYTDLKPVVAEISAYR-RALDDLAQAEA 62 Query: 76 ALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131 L + + L E + L +K E+E +LL +A D+ A LE+ G GG E+ Sbjct: 63 LLADPEMRPLAE--EELPSLKARIPELEQALRLALLPKDAADARPAILEIRPGTGGDEAA 120 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY R+AE + ++ E ++ D + GI+ T+ ++G + LK E GVHR+ Sbjct: 121 LFAADLLRMYQRYAESQGWRFEIIDQQDSDLGGIRDVTVHVQGAGVFAKLKYESGVHRVQ 180 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P ++ ++++I SD RIDT RASGAGGQHVNTTDSAVR Sbjct: 181 RVPETESQGRVHTSAATVAVLPEAEE-VDLDIPASDIRIDTMRASGAGGQHVNTTDSAVR 239 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG++V Q +SQH+N+ A +LRA+LY+LE + R + A + K ++G G Sbjct: 240 ITHLPTGIIVTSAQ-KSQHRNRDLAMQVLRARLYDLE-RARVDGARAAD-RKAQVGSGDR 296 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ + ++ GDL + A +A Sbjct: 297 SERIRTYNF-PQGRLTDHRINLTLYALPQIMAGDLGGVIDALVA 339 >gi|257457982|ref|ZP_05623141.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580] gi|257444695|gb|EEV19779.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580] Length = 355 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 123/339 (36%), Positives = 184/339 (54%), Gaps = 27/339 (7%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-------FIKEI-QDRLCDNLILLELAL 77 L + +DP L +N K MRE +L + F +EI Q R + Sbjct: 15 LEEEIQDPALIKNQNRYKEAMREHAYLSKLMEEYAQYLRFEQEIIQTRA--------MMQ 66 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQ--FESLL--SGEADSNDAYLEVHAGAGGTESQDW 133 EE D + + + L ++ ++E + + LL + + +E+ G GG E+ + Sbjct: 67 EETDHELKEMAREELHNLEAQLEQSENNLKVLLIPPDPLEEKNIIMEIRGGTGGEEAALF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A LL+MYT +AE + +K E L ++ E G K TL I G YG L+ E GVHR+ R+ Sbjct: 127 AADLLKMYTHYAELKNWKYEILSSNETELGGFKEVTLSISGKYVYGSLRYESGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + + R HTS ++ V P +++ EI I + D RID RA G GGQ VNTTDSAVRIT Sbjct: 187 PETEGSGRIHTSAVTVAVLPEAEET-EIVIKQEDLRIDVMRAGGPGGQCVNTTDSAVRIT 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG+VV CQ E+SQ KNKA+A +LR++LY++E K++ + E K ++G G Sbjct: 246 HIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDMEEAKKQ--SERAEDRKNQVGSGDRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R N+ ++ GDL++ ++A Sbjct: 304 RIRTYNY-PQNRVTDHRINLTLYKLDTIMQGDLNEIVEA 341 >gi|209551100|ref|YP_002283017.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238054472|sp|B5ZRR4|RF1_RHILW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|209536856|gb|ACI56791.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 359 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG+E+ +A L RMY R++ ++ +K E L +GE G K Sbjct: 107 ADEKSAILEIRAGTGGSEAALFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEIIAT 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS +++ V P ++ I+IEI D RID Sbjct: 167 ITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVNTTDSAVRITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQR 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K+++G G +IR+Y P + D R N+ +++G++++ + Sbjct: 285 AD--SERSADRKSQVGSGDRSERIRTYNF-PQGRITDHRINLTLYKLDRMMEGEIEEVVD 341 Query: 349 ATLA 352 A +A Sbjct: 342 ALMA 345 >gi|72080478|ref|YP_287536.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 7448] gi|119361561|sp|Q4A8M6|RF1_MYCH7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71913602|gb|AAZ53513.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae 7448] Length = 361 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 121/336 (36%), Positives = 183/336 (54%), Gaps = 35/336 (10%) Query: 43 KMLMRERQHLDNA-----ISFIKEIQDRLCDNLILLE----LALEEDDCSILQETSDNLQ 93 ++L ++Q+L A I+ I E+ + D+ +LE + ++EDD ++Q L Sbjct: 27 QILNDQKQYLQIAKEIASITEIIEVFQKFLDDQKVLEDAKTILIQEDDPELIQ-----LA 81 Query: 94 RIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 ++++ K E L + D D +E+ AGG E+ + L +MY +W Sbjct: 82 KVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEANIFVGDLFKMYHKW 141 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A+ +K K + L G I G Y LK E GVHR+ R+ ++ R HT Sbjct: 142 ADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRVQRVPATETMGRIHT 201 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTDSAVRITHIPTG+VV Q Sbjct: 202 STATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAVRITHIPTGIVVTSQ 261 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIAN-----IGESSKTEIGWGRQIRSYVLQP 319 ERSQ NK A +L++K+Y LELQK+++ + G +++E +IR+Y P Sbjct: 262 DERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGARSE-----KIRTYNY-P 315 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + D R N TS ++ G L+ ++A LA +K Sbjct: 316 QDRLTDHRINFS-TSLKPIIQGSLNPIIEALLAQEK 350 >gi|58583231|ref|YP_202247.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625067|ref|YP_452439.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575465|ref|YP_001912394.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae PXO99A] gi|75434334|sp|Q5GWQ9|RF1_XANOR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361638|sp|Q2NZW2|RF1_XANOM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238689539|sp|B2SQN5|RF1_XANOP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|58427825|gb|AAW76862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369007|dbj|BAE70165.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519917|gb|ACD57862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 361 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 116/322 (36%), Positives = 174/322 (54%), Gaps = 10/322 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + N + + L RE L+ ++ E + R +L E + + L E Sbjct: 25 DPDVVNNNDKFRTLSRELSQLE-PVAVALEDEARAKADLSAAEAMRTDPEMRELAEEEIA 83 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +LE Q SLL +D +LEV AG GG E+ +A L RMY R+AE++ Sbjct: 84 AAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQG 143 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E GE G K + G AY LK E G HR+ R+ +S R HTS +++ Sbjct: 144 WKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATV 203 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQ Sbjct: 204 AIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQ 263 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326 H N+ +A L+A+L + E K A ++ K ++G G ++IR+Y P + D Sbjct: 264 HANRDKAMKRLKAQLLDTEHSK--AAAAQAQTRKLQVGSGDRSQRIRTYSF-PQGRITDH 320 Query: 327 RT-NIEKTSPSDVLDGDLDDFM 347 R + ++++GDLD + Sbjct: 321 RVEGLTLYDLPNIIEGDLDALI 342 >gi|229542476|ref|ZP_04431536.1| peptide chain release factor 1 [Bacillus coagulans 36D1] gi|229326896|gb|EEN92571.1| peptide chain release factor 1 [Bacillus coagulans 36D1] Length = 356 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 123/349 (35%), Positives = 188/349 (53%), Gaps = 16/349 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD AV+ R LN DP + + + + +E+ L + KE+Q +L D Sbjct: 1 MFDRLQAVEDRYEKLNELLSDPEIVNDPKKLREYSKEQSDLQETVQVYREYKEVQKQLQD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125 LL L+ + +++E L+ K+ EY++ +L D ND +E+ A Sbjct: 61 AKSLLSEKLDPEMKDMVKEEIHELES-KIP-EYEERLKILLLPKDPNDEKNVIVEIRGAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY R+AE + +K + +E + G K ++ G AY LK E Sbjct: 119 GGDEAALFAGDLYRMYMRYAESQGWKIDVIEANVTGIGGYKEIVFMVNGKGAYSKLKFEN 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ V P ++ +E++I+E D R+DT+ +SG GGQ VNT Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEVDINEKDIRVDTFASSGPGGQSVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ Q E A + K+ Sbjct: 238 TMSAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDANRKSA 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R + VLDG LD+ + A + Sbjct: 296 VGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGKLDEIIDALI 343 >gi|320449105|ref|YP_004203663.1| peptide chain release factor 1 [Thermus scotoductus SA-01] gi|320151737|gb|ADW23114.1| peptide chain release factor 1 [Thermus scotoductus SA-01] Length = 354 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 111/323 (34%), Positives = 178/323 (55%), Gaps = 10/323 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-ILQETSD 90 DP + ++ + L R + I+ I+E + ++ ++L +E LE+ + + + + Sbjct: 21 DPEVLKDQKRYQALSRRYAEMGEVIALIREYR-KVLEDLEGVEGLLEDPELKEVARAEKE 79 Query: 91 NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L K ++E LL + D DA +E+ AG GG E+ +A LL MY R+AE+ Sbjct: 80 ALLSRKADLEKALERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFAEEMG 139 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+TE L+ H + G ++GP AYG K E GVHR+ R+ ++ R HTS +++ Sbjct: 140 FETEILDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATV 199 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++S + +++ + RID RASG GGQ VNTTDSAVR+ H+PTG++V CQ RSQ Sbjct: 200 AVLPKAEES-DFQLNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326 KN+ +A +LR++L LE+++ EE + ++ +IG G +IR+Y P V D Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAEKLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315 Query: 327 RTNIEKTSPSDVLDGDLDDFMKA 349 R +L G L ++A Sbjct: 316 RIGFTTHDLEGILSGHLQPLLEA 338 >gi|296271838|ref|YP_003654469.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299] gi|296096013|gb|ADG91963.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299] Length = 355 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 114/280 (40%), Positives = 164/280 (58%), Gaps = 17/280 (6%) Query: 56 ISFIKEIQDR--LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 IS + +IQD L D+ L ELA EE L++ L++ +E E K + D Sbjct: 53 ISVLNDIQDNKLLYDDPELGELAKEE-----LKDLE--LRKPTIEEEIKVL-MIPKDPND 104 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + + ++E+ AGAGG E+ + L R Y R+AE + +K E + + E G K L K Sbjct: 105 NKNIFIELRAGAGGDEAGIFVGNLFRAYLRYAELKGWKVEIMNQSENEAGGYKEIVALFK 164 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G Y LK E G HR+ R+ +S R HTS ++ V P VDD +E+EI D +ID Sbjct: 165 GEQVYSRLKYESGTHRVQRVPATESQGRVHTSAITVAVMPEVDD-VEVEIDPGDLKIDVM 223 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASG GGQ VNTTDSAVRITHIP+G+VV Q ++SQHKNK +A +L+A+LY++++Q E Sbjct: 224 RASGNGGQSVNTTDSAVRITHIPSGLVVTNQDQKSQHKNKDKAMKVLKARLYDIQMQ--E 281 Query: 294 EIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNI 330 ++ + G S K ++G G +IR+Y P + D R N+ Sbjct: 282 KMDSEGASRKEQVGTGDRSGRIRTYNY-PQGRISDHRINL 320 >gi|99080782|ref|YP_612936.1| peptide chain release factor 1 [Ruegeria sp. TM1040] gi|119361610|sp|Q1GI42|RF1_SILST RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|99037062|gb|ABF63674.1| bacterial peptide chain release factor 1 (bRF-1) [Ruegeria sp. TM1040] Length = 350 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 115/315 (36%), Positives = 172/315 (54%), Gaps = 15/315 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-Q 103 L +E L + I Q L D E+ + D ++ +E L+ + E+ Q Sbjct: 32 LAKEYSDLRPVVEQISAYQQLLSDLAEAEEMLADPDMKALAEEEIPTLKAALPQAEHALQ 91 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 L EADS A LE+ G GG E+ +A L RMY+R+AE + +K + +E E Sbjct: 92 LALLPKDEADSRAAILEIRPGTGGDEAALFAADLYRMYSRYAETQGWKVDVIEEQASELG 151 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G+K I G + LK E GVHR+ R+ +S R HTS +++ V P +D ++I+I Sbjct: 152 GLKELVARINGDGVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDIKI 210 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +D RIDT RASGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+ + Sbjct: 211 DANDLRIDTMRASGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKTR 269 Query: 284 LYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LY+LE Q+ + + +G ++E +IR+Y P + D R N+ Sbjct: 270 LYDLERQRIDTERSADRASQVGSGDRSE-----RIRTYNF-PQGRMSDHRINLTLYKLDQ 323 Query: 338 VLDGDLDDFMKATLA 352 ++ GDLD+ + A ++ Sbjct: 324 IMGGDLDEIIDALIS 338 >gi|311740614|ref|ZP_07714441.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium ATCC 33035] gi|311304134|gb|EFQ80210.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium ATCC 33035] Length = 362 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 168/285 (58%), Gaps = 15/285 (5%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132 E+A E+ D QE +D L++ +E K + L E DS D +E+ AGAGG E+ Sbjct: 70 EMAYEDHD---FQEEADRLEKSVESLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPN---AYGWLKGEQGV 187 +A L RMY R+A+K F E L +++ + G+K T+ K P+ A+ K E GV Sbjct: 127 FAGDLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEGGV 186 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R TS + + VYP ++ + I + D R+D YR+SG GGQ VNTTD Sbjct: 187 HRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTD 246 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306 SAVRITH+PTG++V CQ+ERSQ +NKA+A +L+A+L ++E + RE A GE +++ Sbjct: 247 SAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREARE--AEAGEQRASQVR 304 Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R + + VL+GD++D +KA Sbjct: 305 TMDRSERIRTYNW-PENRITDHRIGYKANNLDSVLNGDMNDLIKA 348 >gi|312601125|gb|ADQ90380.1| Peptide chain release factor 1 [Mycoplasma hyopneumoniae 168] Length = 357 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 121/336 (36%), Positives = 183/336 (54%), Gaps = 35/336 (10%) Query: 43 KMLMRERQHLDNA-----ISFIKEIQDRLCDNLILLE----LALEEDDCSILQETSDNLQ 93 ++L ++Q+L A IS I E+ + D+ +LE + ++EDD ++Q L Sbjct: 23 QILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVLEDAKTILIQEDDPELIQ-----LA 77 Query: 94 RIKLEVEYKQFES---------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 ++++ K E L + D D +E+ AGG E+ + L +MY +W Sbjct: 78 KVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGGDEANIFVGDLFKMYHKW 137 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A+ +K K + L G I G Y LK E GVHR+ R+ ++ R HT Sbjct: 138 ADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGVHRVQRVPATETMGRIHT 197 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTDSAVRITHIPTG+V Q Sbjct: 198 STATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTDSAVRITHIPTGIVATSQ 257 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIAN-----IGESSKTEIGWGRQIRSYVLQP 319 ERSQ NK A +L++K+Y LELQK+++ + G +++E +IR+Y P Sbjct: 258 DERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGARSE-----KIRTYNY-P 311 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + D R N TS ++ G+L+ ++A LA +K Sbjct: 312 QDRLTDHRINFS-TSLKPIIQGNLNPIIEALLAQEK 346 >gi|295111719|emb|CBL28469.1| bacterial peptide chain release factor 1 (bRF-1) [Synergistetes bacterium SGP1] Length = 357 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 109/265 (41%), Positives = 155/265 (58%), Gaps = 13/265 (4%) Query: 96 KLEVEYKQFE---SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +LE + + FE ++L D ND +E+ AG GG E+ +A L RMYTR+ E+++ Sbjct: 84 ELEPQIENFEKELTILLLPKDPNDEKSVIVEIRAGVGGDEAALFAADLYRMYTRFCERQR 143 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E ++ G K I AY +K E G HR+ R+ +++ R HTS +++ Sbjct: 144 WKIEVIDSSLIGLGGYKEVIFRIDSHGAYSMMKYESGGHRVQRVPVTEASGRIHTSSATV 203 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P V+D IEIEI D ++DTYR+SGAGGQHVN TDSAVRITH+PTG+V CQ ERSQ Sbjct: 204 AVMPEVED-IEIEIRPEDLKVDTYRSSGAGGQHVNMTDSAVRITHLPTGIVATCQDERSQ 262 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326 KN+A+A L+A+LY LE +K+ A + IG G +IR+Y P + D Sbjct: 263 IKNRARAMAYLKARLYALEQEKQN--AEQASERRGMIGSGDRSERIRTYNF-PQNRITDH 319 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351 R N+ + LDGDL + + A + Sbjct: 320 RINLTLYKLDNYLDGDLFEMIDAMI 344 >gi|71083224|ref|YP_265943.1| protein release factor class I [Candidatus Pelagibacter ubique HTCC1062] gi|119361574|sp|Q4FN99|RF1_PELUB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71062337|gb|AAZ21340.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter ubique HTCC1062] Length = 357 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/247 (40%), Positives = 149/247 (60%), Gaps = 7/247 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD +A +E+ AG GG E+ +A L +MY + + ++K++ E + + E G+K Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIA 164 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I+G N Y LK E GVHR+ R+ ++ R HTS +++ V P ++ ++I+I++SD RI Sbjct: 165 SIRGKNIYSTLKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDIKINDSDLRI 223 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +RA G GGQ VNTTDSAVRITHIPTG+ V Q ++SQHKNKA+ +LR++LYELE Sbjct: 224 DVFRAGGPGGQSVNTTDSAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERS 283 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E E K++IG G +IR+Y P V D R N+ L+G+ D M Sbjct: 284 RIE--GERSEDRKSKIGTGDRSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEM 340 Query: 348 KATLAIK 354 L ++ Sbjct: 341 VENLTLQ 347 >gi|297182760|gb|ADI18914.1| protein chain release factor a [uncultured SAR11 cluster bacterium HF0010_09O16] Length = 356 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/247 (40%), Positives = 150/247 (60%), Gaps = 7/247 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD +A +E+ AG GG E+ +A L +MY + K+K+ E + I + G+K Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFAGDLFKMYEKVCNKKKWSLELISISRSDAGGLKEVIA 164 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG N Y LK E GVHR+ R+ ++ R HTS +++ V P ++ ++++I+E+D RI Sbjct: 165 SIKGNNIYSTLKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDLKINETDLRI 223 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +RA G GGQ VNTTDSAVRITH+P+G+ V Q E+SQHKNKA+ +LRA+LYELE Sbjct: 224 DVFRAGGPGGQSVNTTDSAVRITHLPSGLSVSQQDEKSQHKNKAKGMKILRARLYELERT 283 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + ++ + SK IG G +IR+Y P V D R N+ + L+G+ D + Sbjct: 284 RIDQERSADRKSK--IGTGDRSERIRTYNF-PQGRVTDHRINLTLHKLEEFLEGEAFDEI 340 Query: 348 KATLAIK 354 +L++K Sbjct: 341 IESLSLK 347 >gi|256419486|ref|YP_003120139.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588] gi|256034394|gb|ACU57938.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588] Length = 354 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 168/292 (57%), Gaps = 11/292 (3%) Query: 65 RLCDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLE 120 + DN+ + LE D + +E ++ LQ +K E E L+ + D +A LE Sbjct: 53 KTLDNIAFNKEVLESGDEEMRELAKEETEALQLLKDEQEADIRNLLIPKDPQDEKNAMLE 112 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + G GG E+ +A LLRMY R+ E + + T + G G K + + G + YG Sbjct: 113 IRGGTGGDEASLFAGDLLRMYLRYCETKGWSTSIMNETPGAAGGYKEVVVEVTGDDVYGT 172 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHR+ R+ ++ R HTS +++ + P ++ +++EI ++D ++DT+R+SGAGG Sbjct: 173 LKFESGVHRVQRVPATETQGRVHTSAATVAILPEAEE-VDVEIRDADIKMDTFRSSGAGG 231 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVR+THIP+GVVV+CQ+ RSQH N+ A MLR+++YE ++K EE I Sbjct: 232 QHVNKTESAVRLTHIPSGVVVECQEGRSQHSNRDIAMKMLRSRIYEAAVRKHEEA--IAS 289 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K+ + G +IR+Y P V D R + + ++GD+ + ++A Sbjct: 290 QRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGMTMYNLDAFMNGDIQEMVQA 340 >gi|313678884|ref|YP_004056624.1| peptide chain release factor 1 [Mycoplasma bovis PG45] gi|312950243|gb|ADR24838.1| peptide chain release factor 1 [Mycoplasma bovis PG45] Length = 358 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 99/249 (39%), Positives = 145/249 (58%), Gaps = 16/249 (6%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D + +E+ AGG E+ +A L RMY ++A++ F+ + L + G Sbjct: 107 ENDDKNIIVEIRGAAGGDEANIFAGDLFRMYNKFADELGFRLKILSTNSANAGGFSQIVF 166 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG AY K E GVHR+ R+ +S R HTS +++ V P +DD+++IEI SD +I Sbjct: 167 SIKGEKAYSKFKFESGVHRVQRVPVTESQGRIHTSTTTVTVMPEIDDTVDIEIKPSDLKI 226 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +R+SGAGGQ VNTTDSAVRITH+PT +VV Q ERSQ N+ A +L++KLY+LE+Q Sbjct: 227 DVFRSSGAGGQSVNTTDSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQ 286 Query: 291 KREE-------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 K+ + +A G+ S+ +IR+Y P V D R + TS +++G L Sbjct: 287 KKADEESGYRKLAGHGDRSE-------KIRTYNY-PQDRVTDHRISF-STSLKPIMEGKL 337 Query: 344 DDFMKATLA 352 ++A LA Sbjct: 338 TPIVEALLA 346 >gi|218900455|ref|YP_002448866.1| peptide chain release factor 1 [Bacillus cereus G9842] gi|228903804|ref|ZP_04067920.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222] gi|228911168|ref|ZP_04074974.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200] gi|228942476|ref|ZP_04105013.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228968458|ref|ZP_04129447.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228975408|ref|ZP_04135964.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982045|ref|ZP_04142338.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407] gi|218545538|gb|ACK97932.1| peptide chain release factor 1 [Bacillus cereus G9842] gi|228777709|gb|EEM25983.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407] gi|228784390|gb|EEM32413.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228791238|gb|EEM38851.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228817218|gb|EEM63306.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228848531|gb|EEM93379.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200] gi|228855831|gb|EEN00375.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222] gi|326943127|gb|AEA19023.1| peptide chain release factor 1 [Bacillus thuringiensis serovar chinensis CT-43] Length = 358 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ + +++E L+ E + +L D ND +EV Sbjct: 61 LKDAKAMLEEKLDAEMRDMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|313891751|ref|ZP_07825356.1| peptide chain release factor 1 [Dialister microaerophilus UPII 345-E] gi|313119745|gb|EFR42932.1| peptide chain release factor 1 [Dialister microaerophilus UPII 345-E] Length = 359 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 113/344 (32%), Positives = 190/344 (55%), Gaps = 15/344 (4%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R L K DP + +N + + +E L ++ ++ + LE+ +++ Sbjct: 12 RYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVFETKNAALEILNDKNQ 71 Query: 82 CSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDA---YLEVHAGAGGTESQDWANML 137 + + ++L+ + E+E + + LL D ND+ LE+ AG GG E+ + L Sbjct: 72 EELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEAALFVADL 131 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 L+MY ++AE RK++ +++++ + G + I G NAY LK E GVHR+ RI + Sbjct: 132 LKMYLKFAEHRKWRCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRVQRIPETE 191 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S+ R HTS ++ V P +D ++IEIS+ D R+D YRASGAGGQH+N T SA+RITH+PT Sbjct: 192 SSGRVHTSAVTVAVLPEAED-VDIEISKEDIRVDVYRASGAGGQHINKTSSAIRITHLPT 250 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+VV CQ ER Q +N+ +A +L+A+LY+ L+K + + ++ K ++G G +IR+ Sbjct: 251 GIVVTCQNERDQRQNREKAMQILKARLYDEALRKTK--SETAQNRKEQVGSGDRSERIRT 308 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDL----DDFMKATLAIK 354 Y P + D R + ++G + D ++A L +K Sbjct: 309 YNY-PQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLIEADLNLK 351 >gi|255324516|ref|ZP_05365633.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum SK141] gi|255298422|gb|EET77722.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum SK141] Length = 358 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 168/285 (58%), Gaps = 15/285 (5%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132 E+A E+ D QE +D L++ +E K + L E DS D +E+ AGAGG E+ Sbjct: 66 EMAYEDHD---FQEEADRLEKSVENLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAAL 122 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPN---AYGWLKGEQGV 187 +A L RMY R+A+K F E L +++ + G+K T+ K P+ A+ K E GV Sbjct: 123 FAGDLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEGGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R TS + + VYP ++ + I + D R+D YR+SG GGQ VNTTD Sbjct: 183 HRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306 SAVRITH+PTG++V CQ+ERSQ +NKA+A +L+A+L ++E + RE A GE +++ Sbjct: 243 SAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREARE--AEAGEQRASQVR 300 Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R + + VL+GD++D +KA Sbjct: 301 TMDRSERIRTYNW-PENRITDHRIGYKANNLDSVLNGDMNDLIKA 344 >gi|308805082|ref|XP_003079853.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri] gi|116058310|emb|CAL53499.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri] Length = 1134 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 122/321 (38%), Positives = 181/321 (56%), Gaps = 23/321 (7%) Query: 39 VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--K 96 VIEA + L S +K ++D + L ELA D+ I + + L+ I K Sbjct: 572 VIEANKELARLDPLVKQYSMVKSLRD---ERESLDELARTSDEKDITELAREELRAIDAK 628 Query: 97 LEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 L + +L D++D A LEV AGAGG E+ +A L RMY A K ++ E Sbjct: 629 LPEQEHALRIMLLPRDDADDRGAILEVRAGAGGDEAALFAAELFRMYALHARKSGWRFET 688 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 L + + + GI+ + + G +G LK E GVHR+ R+ ++ R HTS +S+ V P Sbjct: 689 LNMSETDGKGIREGSAEVLGDGVFGRLKFESGVHRVQRVPETETQGRVHTSTASVAVLPH 748 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + ++++I + D RI+T RASGAGGQHVNTT+SAVR+TH+PTG+ V Q ERSQHKNKA Sbjct: 749 AAE-VDMDIRDEDVRIETMRASGAGGQHVNTTNSAVRLTHLPTGITVAIQDERSQHKNKA 807 Query: 275 QAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +A+++L+++LY++E RE++AN E + IG G ++R+Y P VKD R + Sbjct: 808 KAFSVLKSRLYDME---REKLANERAELRSSLIGTGDRSEKVRTYNF-PQGRVKDHRVDG 863 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 + GD+ FM L Sbjct: 864 N-------VSGDIKGFMDGFL 877 >gi|269794320|ref|YP_003313775.1| peptide chain release factor 1 [Sanguibacter keddieii DSM 10542] gi|269096505|gb|ACZ20941.1| bacterial peptide chain release factor 1 (bRF-1) [Sanguibacter keddieii DSM 10542] Length = 361 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 105/247 (42%), Positives = 147/247 (59%), Gaps = 9/247 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LE+ AG GG ES +A LLRMY R+AE+R +KTE +E + + G K + + Sbjct: 103 DGRDVILEIKAGEGGEESALFAGDLLRMYLRYAERRGWKTEVIEATESDLGGYKDVQVAV 162 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K P W LK E GVHR+ R+ +S R HTS + + V+P V+D+ E+EI + Sbjct: 163 KAKGTVAPEDGPWANLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVFPEVEDAGELEIDQ 222 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ QA +LRA+L Sbjct: 223 NDLRIDVYRSSGPGGQSVNTTDSAVRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLL 282 Query: 286 ELELQKREEIAN-IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ AN I S + +IR+Y P + D RT + + VLDGDL+ Sbjct: 283 AARQEEEAAAANDIRRSQVRTVDRSERIRTYNY-PENRIADHRTGYKSYNLDQVLDGDLE 341 Query: 345 DFMKATL 351 +++ + Sbjct: 342 PVVRSAI 348 >gi|257453431|ref|ZP_05618726.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60] gi|257449183|gb|EEV24131.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60] Length = 364 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 137/224 (61%), Gaps = 9/224 (4%) Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D ND A+LE+ AG GG E+ ++ L RMY R+A + ++ E L ++GE G K Sbjct: 108 DPNDKVPAFLEIRAGTGGDEAAIFSGDLFRMYERYAATQGWQVEVLSENEGEHGGYKEII 167 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + G YG LK E G HR+ R+ +S R HTS ++ V P V+ ++I+ +D R Sbjct: 168 SRVSGTGVYGRLKFESGAHRVQRVPETESQGRVHTSACTVAVMPEVEIDDTVDINPADLR 227 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDTYRASGAGGQH+N TDSAVRITHIPTG VV+CQQERSQH N+ +A ML +K+ + ++ Sbjct: 228 IDTYRASGAGGQHINKTDSAVRITHIPTGTVVECQQERSQHANRDKAMKMLVSKIQQEKV 287 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 QK +I + + +G G +IR+Y P + D R N+ Sbjct: 288 QK--QIDASSDMRRNLVGSGDRSERIRTYNF-PQGRMTDHRINL 328 >gi|229076544|ref|ZP_04209504.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18] gi|229099762|ref|ZP_04230687.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29] gi|229105922|ref|ZP_04236546.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28] gi|229118825|ref|ZP_04248174.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3] gi|228664626|gb|EEL20119.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3] gi|228677496|gb|EEL31749.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28] gi|228683651|gb|EEL37604.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29] gi|228706577|gb|EEL58790.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18] Length = 358 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 124/350 (35%), Positives = 184/350 (52%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNDVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ D +++E L+ E + +L D ND +EV Sbjct: 61 LRDAKAMLEDKLDADMREMVKEEVSELE--GQEKTLSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEITIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|91762346|ref|ZP_01264311.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter ubique HTCC1002] gi|91718148|gb|EAS84798.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter ubique HTCC1002] Length = 357 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/247 (40%), Positives = 149/247 (60%), Gaps = 7/247 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD +A +E+ AG GG E+ +A L +MY + + ++K++ E + + E G+K Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIA 164 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I+G N Y LK E GVHR+ R+ ++ R HTS +++ V P ++ ++I+I++SD RI Sbjct: 165 SIRGKNIYSTLKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDIKINDSDLRI 223 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +RA G GGQ VNTTDSAVRITHIPTG+ V Q ++SQHKNKA+ +LR++LYELE Sbjct: 224 DVFRAGGPGGQSVNTTDSAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERS 283 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E E K++IG G +IR+Y P V D R N+ L+G+ D M Sbjct: 284 RIE--GERSEDRKSKIGTGDRSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEM 340 Query: 348 KATLAIK 354 L ++ Sbjct: 341 VENLTLQ 347 >gi|78221601|ref|YP_383348.1| peptide chain release factor 1 [Geobacter metallireducens GS-15] gi|119361544|sp|Q39YQ1|RF1_GEOMG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78192856|gb|ABB30623.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter metallireducens GS-15] Length = 355 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 97/243 (39%), Positives = 148/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG ES +A L RMY+R+AE+ ++K E + + E G K LI Sbjct: 103 DDRNVILEIRAGTGGDESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEVVALI 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + LK E G HR+ R+ ++ R HTS ++ V P +D IEI+I+ D +ID Sbjct: 163 EGQAVFAKLKYESGTHRVQRVPETEAQGRIHTSACTVAVLPEAED-IEIDINPVDLKIDV 221 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN T+SAVRITH+PTG+VV+CQ ERSQ KN+++A +L++++ L+ ++ Sbjct: 222 YRASGAGGQHVNKTESAVRITHLPTGIVVECQDERSQIKNRSKAMKVLKSRI--LDGLQQ 279 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A I K ++G G +IR+Y P + D R + +++GD+ + + + Sbjct: 280 EQNARIAADRKQQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDALMEGDIAEVVDS 338 Query: 350 TLA 352 A Sbjct: 339 LRA 341 >gi|56808306|ref|ZP_00366070.1| COG1186: Protein chain release factor B [Streptococcus pyogenes M49 591] Length = 214 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 93/214 (43%), Positives = 135/214 (63%), Gaps = 2/214 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + ++ L +P + I A+ +E L +Q+ + +LLE+ L+ED Sbjct: 3 EEIALLENHMTEPDFXNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM-LDED 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+ +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LLRM Sbjct: 62 D-SLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRM 120 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 121 YTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK 180 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 RRHTSF+S+ V P +DD+IE+E+ + D ++DT++ Sbjct: 181 RRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFQ 214 >gi|85709577|ref|ZP_01040642.1| protein chain release factor A [Erythrobacter sp. NAP1] gi|85688287|gb|EAQ28291.1| protein chain release factor A [Erythrobacter sp. NAP1] Length = 355 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 103/246 (41%), Positives = 146/246 (59%), Gaps = 10/246 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ AG GG E+ +A L RMY ++A ++ ++ E + + E G K Sbjct: 103 ADAKPAMLEIRAGTGGDEAALFAGDLFRMYEKYAAEQGWRVEPVSMSASEVGGFKEIVAN 162 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +S R HTS +++ V P D+ ++++I D +ID Sbjct: 163 VSGQGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPDE-VDVQIDPGDLKID 221 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYRASGAGGQHVNTTDSA+RITH PTG+VV CQ RSQHKN+ +A +LRA+LYE + Sbjct: 222 TYRASGAGGQHVNTTDSAIRITHEPTGLVVTCQDGRSQHKNREKAMQVLRARLYE---KT 278 Query: 292 REEIANI-GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346 R+E E+ K +G G +IR+Y P V D R + +VL G LD+ Sbjct: 279 RDEAQGAEAEARKAMVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHKLEEVLAGPGLDEL 337 Query: 347 MKATLA 352 + A +A Sbjct: 338 VDALIA 343 >gi|229826190|ref|ZP_04452259.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC 49176] gi|229789060|gb|EEP25174.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC 49176] Length = 357 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 119/333 (35%), Positives = 182/333 (54%), Gaps = 35/333 (10%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIK-------EIQDRLCDNLILLELALEEDDCSI 84 DP+ ++N LM+E+ L + K +I+D C L + EE D + Sbjct: 27 DPNKFRN------LMKEQSDLQPIVEKYKAYKANNEQIED--C-----LRMISEESDPEL 73 Query: 85 LQETSDNLQRIKLEV-EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRM 140 + + L K V E+++ +L D ND +E+ AG GG E+ +A+ L RM Sbjct: 74 KELAREELAEAKAAVPEFEKELKVLLLPKDKNDDKNVIVEIRAGTGGDEAAIFASELYRM 133 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y ++AE ++K E L ++ G K T LI G A+ LK E G HR+ R+ +SN Sbjct: 134 YCKYAENNRWKPEILSFNENGLGGFKEVTFLINGKGAFSKLKYESGTHRVQRVPVTESNG 193 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 + TS +++ + P ++ +++ I +D + D +RASG GGQ VNTTDSAVR+THIPTG+V Sbjct: 194 KLQTSAATVAILPEAEE-VDVNIDPNDIKFDVFRASGNGGQCVNTTDSAVRLTHIPTGIV 252 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQK--REEIANIGESSKTEIGWG---RQIRSY 315 + CQ E+SQ KNK +A +LR++LYELE +K EE AN K+++G G +IR+Y Sbjct: 253 ISCQDEKSQLKNKDKAMKVLRSRLYELECEKAHAEEAAN----RKSQVGSGDRSEKIRTY 308 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 P V D R + V+ GDL + ++ Sbjct: 309 NF-PQGRVTDHRIKFTTHNIDGVMGGDLTEIIE 340 >gi|222149911|ref|YP_002550868.1| peptide chain release factor 1 [Agrobacterium vitis S4] gi|254790856|sp|B9JT13|RF1_AGRVS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|221736893|gb|ACM37856.1| peptide chain release factor 1 [Agrobacterium vitis S4] Length = 359 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 110/300 (36%), Positives = 169/300 (56%), Gaps = 26/300 (8%) Query: 74 ELALEEDDCSILQ-----ETSDNLQRIKLEVEYKQFESLLSG-------------EADSN 115 EL L E + + L+ +++D R E+E E+ L G AD Sbjct: 51 ELGLAEKEVADLKALLADKSTDREMRDLAEMELPDVEARLEGLEKEIQIQLLPKDAADEK 110 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 A LE+ AG GG+E+ +A L RMY R+A + +K E L +G+ G K + G Sbjct: 111 SAILEIRAGTGGSEAALFAGDLFRMYERFAAGKGWKVEVLSSSEGDAGGFKEIIATVTGR 170 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 + LK E GVHR+ R+ ++ R HTS +++ V P ++ I+IE+ D RIDT R+ Sbjct: 171 GVFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEAEE-IDIEVRAEDIRIDTMRS 229 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+A+A +LR++L+++E Q+ + Sbjct: 230 SGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHQNRAKAMQVLRSRLFDMERQRAD-- 286 Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + K+++G G +IR+Y P V D R N+ ++ G++D+ + A +A Sbjct: 287 SERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRMMMGEIDEVVDALIA 345 >gi|47570471|ref|ZP_00241104.1| peptide chain release factor 1 [Bacillus cereus G9241] gi|228988555|ref|ZP_04148642.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158891|ref|ZP_04286948.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342] gi|47552867|gb|EAL11285.1| peptide chain release factor 1 [Bacillus cereus G9241] gi|228624502|gb|EEK81272.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342] gi|228771172|gb|EEM19651.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 358 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNDVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ + +++E L+ E + +L D ND +EV Sbjct: 61 LKDAKAMLEDKLDAEMREMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|15839238|ref|NP_299926.1| peptide chain release factor 1 [Xylella fastidiosa 9a5c] gi|20139358|sp|Q9PA71|RF1_XYLFA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|9107880|gb|AAF85446.1|AE004071_14 peptide chain release factor 1 [Xylella fastidiosa 9a5c] Length = 361 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 98/239 (41%), Positives = 145/239 (60%), Gaps = 7/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMYTR+AE++++K E GE G K I Sbjct: 107 DECNLFLEVRAGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P D+ +I I+ +D +IDT Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+PTGVVV+ Q ERSQH N+ +A L+A+L E E + Sbjct: 227 FRSSGAGGQHVNKTESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESE--RS 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347 ++ + K ++G G ++IR+Y P + D R N+ ++++GDLD + Sbjct: 285 QQATAEAMTRKLQVGSGDRSQRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLI 342 >gi|223938118|ref|ZP_03630015.1| peptide chain release factor 1 [bacterium Ellin514] gi|223893162|gb|EEF59626.1| peptide chain release factor 1 [bacterium Ellin514] Length = 359 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 120/350 (34%), Positives = 190/350 (54%), Gaps = 26/350 (7%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS----FIKEIQDRLCDNLIL 72 D +R S + DP ++N + L +E L ++ ++K + D L +N L Sbjct: 8 DKFARRFSEVEASLSDPKAFENAQRFQELSKEYSRLKGLVAGGSAYLKAVAD-LEENKTL 66 Query: 73 L-------ELAL-EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L E+AL +++ + L+E ++++ LEV Q L DS + +E+ AG Sbjct: 67 LAAEPADSEMALMAKEEVTRLEEV---VKKLGLEV---QAGVLPPDPTDSRNTIVEIRAG 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG+ES +A L RMYTR+AE + +K E+++ + G K I G + Y LK E Sbjct: 121 AGGSESALFAADLYRMYTRYAESQGWKVESIDASPSDLGGFKEVIFGITGSDVYKRLKYE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ ++ R HTS ++ V P ++ ++I+I D +D RASG GGQ VN Sbjct: 181 SGVHRVQRVPATEAQGRIHTSTCTVAVLPEAEE-VDIDIRPEDLSVDRCRASGKGGQGVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+ HIP+G++V C ERSQHKNKA+A +LR++L LE + +E A K Sbjct: 240 TTDSAVRLHHIPSGLIVYCADERSQHKNKAKAMTVLRSRL--LEKKIADENAKYAAQRKE 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++G G +IR+Y P V D R + + ++G++D ++ + Sbjct: 298 QVGTGERNERIRTYNF-PQNRVTDHRIEVTLYNLPTFVEGEIDSIIEPLM 346 >gi|114569197|ref|YP_755877.1| peptide chain release factor 1 [Maricaulis maris MCS10] gi|119361557|sp|Q0ARZ8|RF1_MARMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114339659|gb|ABI64939.1| bacterial peptide chain release factor 1 (bRF-1) [Maricaulis maris MCS10] Length = 357 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 117/291 (40%), Positives = 168/291 (57%), Gaps = 15/291 (5%) Query: 72 LLELA--LEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEAD-SNDAYLEVHAGA 125 L ELA +E DD + + + +K E+E+ LL + D S +A +E+ AG Sbjct: 58 LAELAEMMEGDDAEMAEMAREEFYALKERLPELEHAMSLMLLPKDKDDSANAMIEIRAGT 117 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L MY R+A+ + + E + +GE G K I G +G LK E Sbjct: 118 GGDEAAIFAGNLYGMYQRYAQLQGWSWELVSASEGEHGGYKEVVAAISGNGVFGRLKFES 177 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS +++ + P +D I+IE+ D R+DT RASGAGGQHVN Sbjct: 178 GVHRVQRVPATESQGRIHTSAATVAIMPQPED-IDIELDMGDVRVDTMRASGAGGQHVNK 236 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+THIPTG+VV C QE+SQH+N+A+A +L+AKLY ++Q+ A K + Sbjct: 237 TDSAVRMTHIPTGLVVVC-QEKSQHQNRARAQEILKAKLY--DMQREAANAERAAERKGQ 293 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 IG G +IR+Y P V D R N+ D++ GD LD+ + A +A Sbjct: 294 IGSGDRSERIRTYNY-PQGRVSDHRINLTLYKLDDIVAGDGLDEVVAALIA 343 >gi|260906196|ref|ZP_05914518.1| peptide chain release factor 1 [Brevibacterium linens BL2] Length = 359 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/238 (42%), Positives = 142/238 (59%), Gaps = 4/238 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ DA +E+ AG GG ES +A LLRMY RW + R + ++ L+ + G K TL + Sbjct: 106 DARDAIIEIKAGEGGDESALFAGDLLRMYQRWIDSRGWSSQILDATHSDLGGYKDVTLAL 165 Query: 173 KGPN--AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 K + AYGW+K E GVHR+ R+ +S R HTS + + V+P VD+ E+ + ++D RI Sbjct: 166 KAKDDGAYGWVKFEGGVHRVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEVALDDNDLRI 225 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK-LYELEL 289 D YR+SG GGQ VNTTDSAVRITH+PTG+ CQ E+SQ +NK A MLRA+ L + Sbjct: 226 DVYRSSGPGGQSVNTTDSAVRITHVPTGITASCQNEKSQLQNKEAALRMLRARILAKQAE 285 Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E A+I S + +IR+Y P + D RT + + VL G+LD + Sbjct: 286 EAAAEAADIRRSQVRTVDRSERIRTYNF-PENRITDHRTGYKAYNLDQVLAGELDPVI 342 >gi|71275264|ref|ZP_00651551.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon] gi|170731262|ref|YP_001776695.1| peptide chain release factor 1 [Xylella fastidiosa M12] gi|238687964|sp|B0U5Z3|RF1_XYLFM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71164073|gb|EAO13788.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon] gi|167966055|gb|ACA13065.1| peptide chain release factor 1 [Xylella fastidiosa M12] Length = 361 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 98/239 (41%), Positives = 145/239 (60%), Gaps = 7/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMYTR+AE++++K E GE G K I Sbjct: 107 DECNLFLEVRAGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P D+ +I I+ +D +IDT Sbjct: 167 VGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+SA+RITH+PTGVVV+ Q ERSQH N+ +A L+A+L E E + Sbjct: 227 FRSSGAGGQHVNKTESAIRITHLPTGVVVESQTERSQHANRDKAMKRLKAQLIESE--RS 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347 ++ + K ++G G ++IR+Y P + D R N+ ++++GDLD + Sbjct: 285 QQATAEAMTRKLQVGSGDRSQRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLI 342 >gi|293375558|ref|ZP_06621832.1| peptide chain release factor 1 [Turicibacter sanguinis PC909] gi|325836776|ref|ZP_08166243.1| peptide chain release factor 1 [Turicibacter sp. HGF1] gi|292645775|gb|EFF63811.1| peptide chain release factor 1 [Turicibacter sanguinis PC909] gi|325491154|gb|EGC93443.1| peptide chain release factor 1 [Turicibacter sp. HGF1] Length = 354 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 113/347 (32%), Positives = 191/347 (55%), Gaps = 11/347 (3%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ A+ +R +N DP + ++ + L +E++ L+ ++ E ++ Sbjct: 1 MFERLEAILERYEKINEMMADPAIVTDIKKLTELSKEQRGLEETVNVYTEYKNIASSIED 60 Query: 72 LLELALEED-DCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGT 128 L E+A + D + S + E + +L +Q E LL D + +E+ AGG Sbjct: 61 LKEMAKDSDPEISEMAEMELEELKPRLPELEQQLEILLIPKDPNDEKNVIVEIRGAAGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ L RMYT++AE + +K + + + E G+ +I G + + +K E G H Sbjct: 121 EANIFASDLYRMYTKYAELKGWKIQVMNVDYSESGGMSQVEFMISGESVFSHMKYESGAH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P +D ++IE+S +D R+DT+ +SG GGQ VNTT S Sbjct: 181 RVQRVPATESQGRIHTSTATVLVMPEAED-VDIEVSMNDIRVDTFCSSGPGGQSVNTTKS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PTG+VV CQ +SQH+NKA A +L+A++Y+ LQ+R E GE +++IG Sbjct: 240 AVRLTHVPTGIVVSCQDGKSQHENKANALKVLKARIYDSILQERLEAE--GEERRSKIGT 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P V D R V++G L+ ++A + Sbjct: 298 GERSEKIRTYNY-PQNRVTDHRIGFTIQQLDRVMEGKLEPVIEALIT 343 >gi|288956982|ref|YP_003447323.1| peptide chain release factor RF-1 [Azospirillum sp. B510] gi|288909290|dbj|BAI70779.1| peptide chain release factor RF-1 [Azospirillum sp. B510] Length = 361 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 110/260 (42%), Positives = 154/260 (59%), Gaps = 9/260 (3%) Query: 98 EVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 E+E K Q L EAD +A LEV AG GG E+ +A L MY R+A ++ EA++ Sbjct: 95 ELERKVQISLLPKDEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLHGWRFEAMD 154 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 + + G K AT I G + LK E GVHR+ R+ ++ R HTS +++ V P + Sbjct: 155 VSETGIGGYKEATANITGRGVFAKLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAE 214 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + ++I I E D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQHKNKA+A Sbjct: 215 E-VDIHIDEKDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGLVVSQQDEKSQHKNKAKA 273 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LY+ E + E+ A K ++G G +IR+Y P V D R N+ Sbjct: 274 LKVLRARLYDRE--RAEKDAARAADRKNQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 330 Query: 334 SPSDVLDGD-LDDFMKATLA 352 V+ G+ LD+ + A +A Sbjct: 331 KIDKVMAGEALDELVDALVA 350 >gi|257439051|ref|ZP_05614806.1| peptide chain release factor 1 [Faecalibacterium prausnitzii A2-165] gi|257198541|gb|EEU96825.1| peptide chain release factor 1 [Faecalibacterium prausnitzii A2-165] Length = 356 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 117/331 (35%), Positives = 186/331 (56%), Gaps = 28/331 (8%) Query: 32 DPHLWQNVI----EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS--IL 85 DP L++ ++ EA+ +++ Q L A QD L LLE + D + Sbjct: 23 DPALFRRLMQEYHEAEPVVQAYQALTTA-------QDHLAQAKALLEGETLDPDFKEMVQ 75 Query: 86 QETSDNLQRI-KLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141 QE + Q + +LE K +L D ND +E+ GAGG E+ +A+ L+RMY Sbjct: 76 QEIGEKSQEVAQLENNLK----ILLLPKDVNDDKSVIMELRGGAGGEEAALFAHSLMRMY 131 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 T + + R ++ E L +++ E G+K A L + G AY LK E GVHR+ R+ ++ R Sbjct: 132 TMYVQSRGWELEVLNLNETELGGVKEAILAVNGAGAYNRLKYESGVHRVQRVPETETQGR 191 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P ++ +++ I D RIDT+R+SGAGGQH+N T SA+R+THIPTG+VV Sbjct: 192 IHTSTATVAVMPQAEE-VDLVIDPKDLRIDTFRSSGAGGQHINKTSSAIRVTHIPTGMVV 250 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 +CQ ERSQ +NK +A +LR++L L +++E+ I + ++G G +IR+Y Sbjct: 251 ECQNERSQFQNKDKALEVLRSRL--LAQKQKEQQDAINANRAGQVGTGDRSEKIRTYNF- 307 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P D R + + ++DG+LD+ + A Sbjct: 308 PQDRCTDHRIGLTVHNLDKIMDGNLDEIIDA 338 >gi|154500225|ref|ZP_02038263.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC 29799] gi|150270957|gb|EDM98231.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC 29799] Length = 355 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 94/242 (38%), Positives = 149/242 (61%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +AN L RMY+ +AE R +K E +++ E GIK + + Sbjct: 103 DGKNVIVEIRAGVGGEEAALFANSLYRMYSMYAETRHWKVEVASLNETELGGIKEISFTV 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS ++ V P ++ ++++I+ +D + Sbjct: 163 EGGGAYSRLKFESGVHRVQRVPETESGDRIHTSTVTVAVLPEAEE-VDVDINPADIEMQV 221 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQH+N T SAVR+ H PTG+VV+CQQERSQ +N+ +A +LR++LYE E Q+ Sbjct: 222 FRSSGAGGQHINKTSSAVRLIHKPTGMVVECQQERSQFQNRDKAMQILRSRLYEAEQQRV 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 A E ++++G G +IR+Y P + D R + DV++GDLD+ + + Sbjct: 282 S--AEWSEERRSQVGTGMRNERIRTYNF-PQGRLTDHRIGLTLYKLEDVMNGDLDEIIDS 338 Query: 350 TL 351 + Sbjct: 339 LI 340 >gi|154687816|ref|YP_001422977.1| peptide chain release factor 1 [Bacillus amyloliquefaciens FZB42] gi|154353667|gb|ABS75746.1| PrfA [Bacillus amyloliquefaciens FZB42] Length = 359 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 116/339 (34%), Positives = 184/339 (54%), Gaps = 13/339 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77 QR LN DP + + + + +E+ + + ++ +D +L D +LE L Sbjct: 13 QRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLADAKAMLEEKL 72 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 + D +++E LQ + E ++ + LL D + +E+ AGG E+ +A Sbjct: 73 DADMREMVKEEISELQG-ETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE + +KTE +E + G K +I G AY LK E G HR+ R+ Sbjct: 132 NLYRMYSRYAEIQGWKTEVMEANVTGTGGYKEIIFMITGKGAYSKLKYENGAHRVQRVPE 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ P ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+ Sbjct: 192 TESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 250 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K+ +G G +I Sbjct: 251 PTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDQTRKSAVGSGDRSERI 308 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R + +L+G LD+ ++A + Sbjct: 309 RTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALI 346 >gi|149914649|ref|ZP_01903179.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b] gi|149811442|gb|EDM71277.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b] Length = 351 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/248 (41%), Positives = 148/248 (59%), Gaps = 14/248 (5%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 +AD+ A LE+ G GG E+ +A LLRMY R+AE R + E +E ++ E GIK Sbjct: 100 KADARPAILEIRPGTGGEEAALFAGDLLRMYHRYAEARGWSFEIIEQNETELGGIKEVIA 159 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G + + LK E GVHR+ R+ +S R HTS +++ V P +D ++++I D RI Sbjct: 160 RVAGDHVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDVQIDPGDLRI 218 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+ +LY+LE Q Sbjct: 219 DTMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHRNREIAMQVLKTRLYDLERQ 277 Query: 291 KREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + A +G ++E +IR+Y P + D R N+ V+ GDLD Sbjct: 278 RAADERSASRAAQVGTGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLD 331 Query: 345 DFMKATLA 352 + + A A Sbjct: 332 EVIDALRA 339 >gi|154246564|ref|YP_001417522.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2] gi|226739122|sp|A7IIM2|RF1_XANP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|154160649|gb|ABS67865.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2] Length = 360 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 119/316 (37%), Positives = 172/316 (54%), Gaps = 13/316 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD----NLILLELALEEDDCSILQETSDNLQ-RIKLEV 99 L RE L + ++ ++D D N +L E A + + + + + LQ RI+ Sbjct: 35 LGREFSDLSPVVEQVRALKDAERDLEGANELLAESAADPEMREMAEAEVERLQDRIEALA 94 Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + L D LEV AG GG E+ +A L RMYTR+A ++ + E L + Sbjct: 95 TAVRLALLPKDAMDERGIILEVRAGTGGDEAALFAGDLYRMYTRYAAEKGWSVEILSESE 154 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G G K + G AY LK E GVHR+ R+ +++ R HTS +++ V P +D + Sbjct: 155 GTMGGYKEIVAALHGRGAYARLKFESGVHRVQRVPATETSGRIHTSAATVAVLPEAED-V 213 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +++I+E+D RID YRA GAGGQHVN T+SAVRITH+PT VV Q ERSQH+NKA+A + Sbjct: 214 DVDINEADLRIDVYRAQGAGGQHVNKTESAVRITHLPTNTVVAVQDERSQHRNKARAMAL 273 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336 LRA+L + E QK+E A K ++G G +IR+Y P V D R N+ Sbjct: 274 LRARLLDDERQKKE--AGRAAERKGQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLD 330 Query: 337 DVLDGD-LDDFMKATL 351 +V+ G LD+ + L Sbjct: 331 EVIAGTALDEIIDPLL 346 >gi|56552405|ref|YP_163244.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761553|ref|ZP_04759640.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753918|ref|YP_003226811.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|81598182|sp|Q5NMC7|RF1_ZYMMO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56543979|gb|AAV90133.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis ZM4] gi|241373861|gb|EER63394.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553281|gb|ACV76227.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 358 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 104/245 (42%), Positives = 148/245 (60%), Gaps = 8/245 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG E+ + LLRMY+R+AE+ ++ E + E G K + Sbjct: 106 ADERSAILEIRAGTGGDEAALFGGDLLRMYSRYAEEHGWRVEMISASAAELGGYKEVVIS 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ +S R HTS +++ V P ++ ++++I E D RID Sbjct: 166 ITGAGVFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEE-VDVDIDERDLRID 224 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +R+SG GGQ VNTTDSAVRITHIP+G+VV Q E+SQHKNKA+A +LRA+LYE E ++ Sbjct: 225 IFRSSGPGGQSVNTTDSAVRITHIPSGIVVSQQDEKSQHKNKAKAMKVLRARLYERE-RE 283 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 R G+ K+ +G G +IR+Y P V D R N+ ++L G LD+ + Sbjct: 284 RLHSERAGQ-RKSMVGSGDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILAGPGLDEVI 341 Query: 348 KATLA 352 A +A Sbjct: 342 SALIA 346 >gi|283850912|ref|ZP_06368198.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B] gi|283573835|gb|EFC21809.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B] Length = 357 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 99/245 (40%), Positives = 147/245 (60%), Gaps = 11/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMY R+AE R++K E + + G K I Sbjct: 105 DDKNILLEIRAGTGGEEAALFAGDLFRMYCRYAEARRWKVELMSQSETGSGGYKEVIASI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ + P ++ +++ I +D RID Sbjct: 165 AGDKVYSRLKYESGAHRVQRVPATESQGRIHTSAVTVAIMPEAEE-VDVAIDPNDLRIDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVR+TH+P+G+VV CQ E+SQHKNKA+A +LR++L ++E +K+ Sbjct: 224 YRSSGPGGQSVNTTDSAVRVTHVPSGLVVICQDEKSQHKNKAKALKVLRSRLLQIEQEKQ 283 Query: 293 --EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E+ A + ++++G G +IR+Y P V D R N+ VL+GDLD+ Sbjct: 284 RLEQEA----TRRSQVGTGDRSERIRTYNF-PQSRVTDHRINLTLYRLEAVLEGDLDELC 338 Query: 348 KATLA 352 + +A Sbjct: 339 EGLIA 343 >gi|255348385|ref|ZP_05380392.1| peptide chain release factor 1 [Chlamydia trachomatis 70] gi|255502926|ref|ZP_05381316.1| peptide chain release factor 1 [Chlamydia trachomatis 70s] gi|255506595|ref|ZP_05382234.1| peptide chain release factor 1 [Chlamydia trachomatis D(s)2923] gi|289525068|emb|CBJ14538.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis Sweden2] gi|296434608|gb|ADH16786.1| peptide chain release factor 1 [Chlamydia trachomatis E/150] gi|296438326|gb|ADH20479.1| peptide chain release factor 1 [Chlamydia trachomatis E/11023] Length = 359 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 123/337 (36%), Positives = 186/337 (55%), Gaps = 19/337 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE---LA 76 ++RL + + DP+++ N E L +E L S IK + L +L+ LA Sbjct: 9 LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARL----SEIKNAHESLVATKKILQDDKLA 64 Query: 77 LE-EDDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND--AYLEVHAGAGGTESQ 131 L E D I+ + + + VE+ KQ E+LL +D +E+ AG GG E+ Sbjct: 65 LSTEKDPEIVAMLEEGVLVGEEAVEHLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + +RMY +A + ++ E L + + G K + I G + +L+ E G HR+ Sbjct: 125 LFVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P +D E+ I E D RIDT+R+SGAGGQHVN TDSAV Sbjct: 185 RVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIP+GVVV CQ ERSQHKNKA+A +L+A++ + E+QKR + A+ S+ ++G G Sbjct: 245 RITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSA--QVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +IR+Y P V D R + + V++G+LD Sbjct: 303 RSERIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELD 338 >gi|306835871|ref|ZP_07468866.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC 49726] gi|304568236|gb|EFM43806.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC 49726] Length = 358 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 113/285 (39%), Positives = 166/285 (58%), Gaps = 15/285 (5%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQD 132 E+A E+ D QE +D L E+E K + L E DS D +E+ AGAGG E+ Sbjct: 66 EMAYEDHD---FQEEADRLAASVEELEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAAL 122 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPN---AYGWLKGEQGV 187 +A L RMY R+A+K FK E L +++ + G+K T+ K P A+ K E GV Sbjct: 123 FAGDLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEGGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R TS + + VYP ++ + I + D R+D YR+SG GGQ VNTTD Sbjct: 183 HRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306 SAVRITH+PTG++V CQ+ERSQ +NKA+A +L+A+L ++E + RE A GE +++ Sbjct: 243 SAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREARE--AEAGEQRASQVR 300 Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++R+Y P + D R + + VL+GD+ D +KA Sbjct: 301 TMDRSERVRTYNW-PENRITDHRIGYKANNLDSVLNGDMQDLIKA 344 >gi|319942226|ref|ZP_08016542.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B] gi|319804279|gb|EFW01171.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B] Length = 358 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 100/240 (41%), Positives = 146/240 (60%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG ES +A LLRMY R+AE ++TE + ++ E G K + I Sbjct: 108 DDRNIFLEIRAGTGGDESALFAGDLLRMYLRYAEGHGWQTEIVSKNESELGGYKEVIVRI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS ++ V P +D+ E++++ +D RID Sbjct: 168 IGRGAYSKLKFESGGHRVQRVPATESQGRIHTSACTVAVLPELDEIEEVKLNPADLRIDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+ TDSAVRITH+PTG+VV+CQ ERSQ +NKA+A +L ++LY ++ ++ Sbjct: 228 FRASGAGGQHIQKTDSAVRITHLPTGMVVECQDERSQTQNKARAMAVLASRLYAQQVAEQ 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E K IG G +IR+Y P V D R N+ +++GDL++ + A Sbjct: 288 HE--REASERKNLIGSGDRSERIRTYNY-PQGRVTDHRINLTLYRLEAIMNGDLEEIITA 344 >gi|258542227|ref|YP_003187660.1| peptide chain release factor 1 [Acetobacter pasteurianus IFO 3283-01] gi|256633305|dbj|BAH99280.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-01] gi|256636364|dbj|BAI02333.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-03] gi|256639417|dbj|BAI05379.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-07] gi|256642473|dbj|BAI08428.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-22] gi|256645528|dbj|BAI11476.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-26] gi|256648581|dbj|BAI14522.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-32] gi|256651634|dbj|BAI17568.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654625|dbj|BAI20552.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-12] Length = 352 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 96/241 (39%), Positives = 148/241 (61%), Gaps = 7/241 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LEV AGG E+ +A L MY R+A+ ++ ++ + E G++ Sbjct: 101 ADARSAILEVRPAAGGDEAGLFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAE 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ +S R HTS ++ V P ++ +++E++E+D R+D Sbjct: 161 INGKGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEE-VDVEVNETDLRVD 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +RASGAGGQHVN T+SAVR+TH+P+G+VV Q+E+SQHKN+A+A +LRA+LYE E + Sbjct: 220 VFRASGAGGQHVNKTESAVRLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLYERE--R 277 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + AN ++++G G +IR+Y P V D R N+ V+ G+LD+F+ Sbjct: 278 AQAHANRAADRRSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLYKIDRVMLGELDEFVD 336 Query: 349 A 349 A Sbjct: 337 A 337 >gi|227501694|ref|ZP_03931743.1| peptide chain release factor 1 [Corynebacterium accolens ATCC 49725] gi|227077719|gb|EEI15682.1| peptide chain release factor 1 [Corynebacterium accolens ATCC 49725] Length = 352 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 114/286 (39%), Positives = 167/286 (58%), Gaps = 17/286 (5%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQ 131 E+A E+ D QE +D L E+E K LL+ E DS D +E+ AGAGG E+ Sbjct: 60 EMAYEDHD---FQEEADRLAASVEELEEK-LADLLAPRDEQDSEDIIMEIKAGAGGEEAA 115 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGP---NAYGWLKGEQG 186 +A L RMY R+A+K FK E L +++ + G+K T+ K P A+ K E G Sbjct: 116 LFAGDLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEGG 175 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R TS + + VYP ++ + I + D R+D YR+SG GGQ VNTT Sbjct: 176 VHRVQRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTT 235 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG++V CQ+ERSQ +NKA+A +L+A+L ++E + RE A GE +++ Sbjct: 236 DSAVRITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREARE--AEAGEQRASQV 293 Query: 307 ---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++R+Y P + D R + + VL+GD+ D +KA Sbjct: 294 RTMDRSERVRTYNW-PENRITDHRIGYKANNLDSVLNGDMQDLIKA 338 >gi|148656981|ref|YP_001277186.1| peptide chain release factor 1 [Roseiflexus sp. RS-1] gi|148569091|gb|ABQ91236.1| bacterial peptide chain release factor 1 (bRF-1) [Roseiflexus sp. RS-1] Length = 364 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 118/330 (35%), Positives = 182/330 (55%), Gaps = 16/330 (4%) Query: 33 PHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P + + + + +RE++ L+ A ++++ ++ D LL + + + QE Sbjct: 26 PEIATDPVRLQQYVREQRDLEPLVEAYQAYRDVERQIEDTRFLLANETDPEVRQLAQEEL 85 Query: 90 DNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 D+L +R +LE + K L DS + +E+ G GG E+ +A L RMYTR+AE+ Sbjct: 86 DHLIERRARLETDIKVL-LLPRDPNDSKNVIMELRQGEGGDEAALFAADLFRMYTRYAEQ 144 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R + + + + G K IKG AY LK E GVHR+ R+ ++ R HTS + Sbjct: 145 RGWDVDVISATENGPGGYKEIVFEIKGEGAYSRLKYEGGVHRVQRVPATEARGRIHTSTA 204 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQ 264 ++ V P ++++ EIE++ SD R+D +R+SG GGQ VNTTDSAVRI + P +VV CQ Sbjct: 205 TVAVLPEIEET-EIELNPSDYRVDVFRSSGHGGQGVNTTDSAVRIVYKPGTPEEIVVTCQ 263 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321 RSQ KNKA A +LRA+LY E +KR + +GES ++G G +IR+Y P Sbjct: 264 DSRSQLKNKASALAVLRARLYAREEEKRRK--ELGESRLAQVGAGERAEKIRTYNF-PQD 320 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V D R ++ +LDGDLD + A + Sbjct: 321 RVTDHRIGQNFSNLPGILDGDLDRLIDALI 350 >gi|331674376|ref|ZP_08375136.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280] gi|331068470|gb|EGI39865.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280] Length = 184 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 91/183 (49%), Positives = 117/183 (63%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 E P +W A+ L +ER L+ + + +++ L D LLELA+E DD E Sbjct: 2 EQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVA 61 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 L ++ ++ +F + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWAE R F Sbjct: 62 ELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGF 121 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 KTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS Sbjct: 122 KTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAV 181 Query: 211 VYP 213 YP Sbjct: 182 CYP 184 >gi|239907764|ref|YP_002954505.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1] gi|259585220|sp|C4XIQ1|RF1_DESMR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|239797630|dbj|BAH76619.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1] Length = 357 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 104/273 (38%), Positives = 158/273 (57%), Gaps = 8/273 (2%) Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 + Q + L+ ++E+E + LL + D + LE+ AG GG E+ +A L RMYT Sbjct: 75 LAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTGGDEAALFAGDLFRMYT 134 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+AE +++K E + + G K I G Y LK E G HR+ R+ +S R Sbjct: 135 RYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESGAHRVQRVPATESQGRI 194 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS ++ + P ++ +++ I ++ RID YR+SG GGQ VNTTDSAVR+THIP+G+VV Sbjct: 195 HTSAVTVAIMPEAEE-VDVAIDPNELRIDVYRSSGPGGQSVNTTDSAVRVTHIPSGLVVI 253 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 CQ E+SQHKNKA+A +LR++L ++E K+ A + ++++G G +IR+Y P Sbjct: 254 CQDEKSQHKNKAKALKVLRSRLLQVEQDKQR--AEQEAARRSQVGTGDRSERIRTYNF-P 310 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R N+ VL+GDLD+ A + Sbjct: 311 QGRVTDHRINLTLYRLDAVLEGDLDELCGALIG 343 >gi|167750775|ref|ZP_02422902.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702] gi|167656210|gb|EDS00340.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702] gi|291530723|emb|CBK96308.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium siraeum 70/3] gi|291557765|emb|CBL34882.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium siraeum V10Sc8a] Length = 358 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 120/343 (34%), Positives = 189/343 (55%), Gaps = 17/343 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD----NLILLELA 76 +R +N K D ++ + + K LM+E ++L I + + D +L + Sbjct: 10 KRFDEINEKLTDINVINDQEQYKSLMKELKNLTPIIEKYRMYKTARSDFEEAEQMLSDGG 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDW 133 L++D I+QE ++ + KL EY +L D +D +E+ GAGG E+ + Sbjct: 70 LDKDFKEIVQEQYESNK--KLMDEYTDELKILLLPKDPDDDRNVIIEIRGGAGGEEAALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 AN + RMY+ +A+ + +KTE + + E G K + ++G Y LK E GVHR+ R+ Sbjct: 128 ANSMFRMYSMYAQTKGWKTEVISSNPTELGGYKEISFSVEGEGVYAKLKYESGVHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R TS ++ V P V++ +++EI+ +D TYR+SGAGGQH+N T+SA+RI Sbjct: 188 PETEAQGRIQTSTITVAVLPEVEE-VDVEINPADLEFQTYRSSGAGGQHINKTESAIRII 246 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H PTGVVV+CQ+ERSQ+KNK +A ML +KLYE +L E+ + I K ++G G Sbjct: 247 HHPTGVVVECQEERSQYKNKDKAMKMLYSKLYEAKLN--EQNSKIAAERKIQVGTGDRSE 304 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IR+Y P V D R + ++GD D+ A LAI Sbjct: 305 RIRTYNY-PQSRVTDHRIGLTLYKLEQFMNGDCDEVFDA-LAI 345 >gi|289643112|ref|ZP_06475242.1| peptide chain release factor 1 [Frankia symbiont of Datisca glomerata] gi|289507076|gb|EFD28045.1| peptide chain release factor 1 [Frankia symbiont of Datisca glomerata] Length = 356 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 119/339 (35%), Positives = 182/339 (53%), Gaps = 22/339 (6%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L ++ DP + + A+ L R L A+ +E+ D E A E D S Sbjct: 15 LESRLADPSVHADPALARSLGRRYAELTPAVETARELDRVAADLATAREFAAE--DTSFR 72 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA------DSNDAYLEVHAGAGGTESQDWANMLLR 139 E ++ LE E + + L D+ DA LE+ AGAGG ES +A LLR Sbjct: 73 AEVAE------LEAEQETLRNRLRAHLVPTDPDDARDAILEIKAGAGGEESALFAGDLLR 126 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRLVRIS 194 MY R+AE+R ++TE L+ + + G + ++ +K +G L+ E GVHR+ R+ Sbjct: 127 MYLRYAERRGWRTEILDANPSDLGGYRDVSVAVKAGRGASEGVFGRLRFEGGVHRVQRVP 186 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS + + V P D +E++I +D RID YR+SG GGQ VNTTDSAVRITH Sbjct: 187 VTESAGRIHTSAAGVLVLPEAAD-VEVDIDPNDLRIDVYRSSGPGGQSVNTTDSAVRITH 245 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIR 313 +P+G+VV CQ E+SQ +NK A +LRA+L + ++ + A+ +S+ + ++R Sbjct: 246 LPSGLVVSCQNEKSQLQNKESALRILRARLLSVARERAQAEASAARASQVRTVDRSERVR 305 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +Y + + D R + + VLDG+LDD + A +A Sbjct: 306 TYNFAENR-ISDHRVGYKAYNLDQVLDGELDDVLNALIA 343 >gi|189502103|ref|YP_001957820.1| peptide chain release factor 1 [Candidatus Amoebophilus asiaticus 5a2] gi|238692309|sp|B3ES89|RF1_AMOA5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189497544|gb|ACE06091.1| hypothetical protein Aasi_0702 [Candidatus Amoebophilus asiaticus 5a2] Length = 355 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 107/261 (40%), Positives = 156/261 (59%), Gaps = 8/261 (3%) Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 LQ+ +LE + K F L DS + LE+ AG GG E+ +A L RMY+R+AEK ++K Sbjct: 86 LQKTQLEEDLK-FLLLPKDPNDSKNVILEIRAGTGGDEAGIFAGDLFRMYSRFAEKMQWK 144 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 +E + G K I G AYG LK E GVHR+ R+ ++ R HTS +S+ V Sbjct: 145 LSIIEEVESTSGGYKEIICSIAGEGAYGMLKYESGVHRVQRVPATETQGRIHTSAASVVV 204 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D+ +E+++ +D R DT+ +SG GGQ VNTT SA+R+THIPTG+VV CQ E+SQ K Sbjct: 205 LPEMDE-VEVDLDMNDIRKDTFCSSGPGGQSVNTTYSAIRLTHIPTGIVVSCQDEKSQIK 263 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328 N +A +LRA+LYE EL+K+++ IG ++ + G +IR+Y P V D R Sbjct: 264 NLEKALKVLRARLYEQELKKQQD--AIGAERRSMVKSGDRSDKIRTYNF-PQGRVTDHRI 320 Query: 329 NIEKTSPSDVLDGDLDDFMKA 349 + V+DG + D ++A Sbjct: 321 GYTIHNLPAVMDGAVGDLIEA 341 >gi|317486540|ref|ZP_07945363.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6] gi|316922215|gb|EFV43478.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6] Length = 356 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 114/334 (34%), Positives = 182/334 (54%), Gaps = 14/334 (4%) Query: 25 FLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLELALEE 79 FL+ + E DP ++ + + L + L + + E++ L DN LL A + Sbjct: 12 FLDLEQELADPTVFNDQDRYRKLTKAHSDLKPVVDIFRQYRELKQNLADNQELLNDA-DP 70 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLL 138 D + E +++ E+E+ LL + D + LE+ AG GG E+ + L Sbjct: 71 DIREMAHEEIKSIEEKLPELEHDLKVLLLPTDPLDEKNIILEIRAGTGGEEAALFGGDLF 130 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+AEK +K E + + + G K LI G Y LK E G HR+ R+ +S Sbjct: 131 RMYCRYAEKMGWKVEIMSQSESDNGGYKEVIALISGDKVYSRLKFESGTHRVQRVPATES 190 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS +++ + P ++ +++++ D R D YR+SG GGQ VNTTDSAVR+THIPTG Sbjct: 191 QGRIHTSAATVAIMPEAEE-VDLDLKPEDLRFDVYRSSGPGGQSVNTTDSAVRVTHIPTG 249 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VV CQ E+SQHKNKA+ +L ++L L++++ E+ A + + + ++G G +IR+Y Sbjct: 250 LVVCCQDEKSQHKNKAKGLKILCSRL--LQMKQDEQNAALADQRRAQVGTGDRSERIRTY 307 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R N+ S VL+G++ + + A Sbjct: 308 NF-PQGRVTDHRINLTLYSLGKVLEGEIQELVDA 340 >gi|294101724|ref|YP_003553582.1| peptide chain release factor 1 [Aminobacterium colombiense DSM 12261] gi|293616704|gb|ADE56858.1| peptide chain release factor 1 [Aminobacterium colombiense DSM 12261] Length = 358 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 126/340 (37%), Positives = 185/340 (54%), Gaps = 30/340 (8%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP + N+ E + L ++ +++A+ +E + D LEE S+L Sbjct: 17 LEKQMSDPVVAANLKEIQQLAKKHAQIESAVLKYREYKKVKSD--------LEEAH-SLL 67 Query: 86 QETSDNLQRIKLEVEYKQFESLLSG----------EADSND---AYLEVHAGAGGTESQD 132 ++Q + E E K+ E LL D ND +E+ GAGG E+ Sbjct: 68 HSGDGDMQELARE-EIKEKEPLLECIRDELHVLLLPVDPNDEKSVIMEIRGGAGGEEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+ E+ ++ E ++ ++ G+K I G AY LK E GVHR+ R Sbjct: 127 FSANLYRMYSRFCEREGWRIEIIQSNETGIGGLKEVIFKIDGRGAYSKLKFESGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS S++ V P V+D ++++I D +IDTYR+SGAGGQHVN TDSAVRI Sbjct: 187 VPMTEAGGRIHTSTSTVAVLPEVED-VDVDIRTEDLKIDTYRSSGAGGQHVNMTDSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV CQ ERSQ KN+A+A LRAKLY LE +K+ E E + +IG G Sbjct: 246 THLPTGIVVTCQDERSQIKNRAKAMMYLRAKLYGLEKEKQAEEQA--EERRGQIGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R + LDGDL + + A Sbjct: 304 ERIRTYNY-PQNRITDHRIGLTLYKLDQYLDGDLYEMIDA 342 >gi|305664895|ref|YP_003861182.1| peptide chain release factor 1 [Maribacter sp. HTCC2170] gi|88707725|gb|EAQ99965.1| peptide chain release factor 1 [Maribacter sp. HTCC2170] Length = 358 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 92/232 (39%), Positives = 143/232 (61%), Gaps = 3/232 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A L RMYT++ E R +KT +++ +G G K + Sbjct: 106 DAKDVVVEIRAGTGGDEASIFAGDLFRMYTKYCEGRGWKTNVIDLSEGTSGGYKEIQFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS +++ V P +D +++I D RID Sbjct: 166 SGADVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAED-FDVQIDPKDVRIDF 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL ++ Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHIPTGLVAQCQDQKSQHKNKDKAFRVLRSRLYDLELARK 284 Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +E +S+ G +IR+Y + V D R + ++++GD+ Sbjct: 285 QEEDAAKRNSQVSSGDRSAKIRTYNYAQGR-VTDHRIGLTLYDLQNIINGDI 335 >gi|229828875|ref|ZP_04454944.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM 14600] gi|229792038|gb|EEP28152.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM 14600] Length = 357 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 120/352 (34%), Positives = 187/352 (53%), Gaps = 20/352 (5%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ V R + + +P + + + LM+E+ L + + Q + Sbjct: 1 MFDKLEDLVARYEEIMRQIAEPDIASDGAKFTELMKEQSELAPIVETFRAYQKQKQSIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND---AYLEVHAGAG 126 LEL E D + Q + L + E Q + LL + DSND +E+ GAG Sbjct: 61 SLELLDAESDEEMRQLAKEELAEARASAEELENQLKVLLLPK-DSNDDRNVIIEIRGGAG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A + RMY +AE R + E +E+ + G+K +++G AY LK E G Sbjct: 120 GDEAALFAAEVYRMYRHYAESRGWACEVMELEETGIGGMKKINFMVRGRGAYSTLKYESG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ V P + +++ I +D RID RASG GGQ VNTT Sbjct: 180 VHRVQRVPATESGGRIHTSTVTVAVMPEAQE-VDVVIDPADIRIDVMRASGNGGQCVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE------IANIGE 300 DSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY +E+ +++E +A IG Sbjct: 239 DSAVRLTHYPTGIVIYSQTEKSQLQNKNKAFALLRAKLYTMEMLRQQEEASARRLAQIGS 298 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 ++E +IR+Y P V D R N+ +L+GDL + + A +A Sbjct: 299 GDRSE-----KIRTYNF-PQGRVTDHRINLTLYKLDKILNGDLQELLDALMA 344 >gi|224541463|ref|ZP_03682002.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM 15897] gi|224525621|gb|EEF94726.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM 15897] Length = 358 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 176/327 (53%), Gaps = 12/327 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + ++ + +E+ L+ A + KE + L D + + L E+D I + Sbjct: 24 DPSIANDIQKMTQASKEQASLEKAYNLYKEYK-ALLDGIEEAKELLNENDPEIKEMAKME 82 Query: 92 LQRIKLE---VEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 L+ ++ + +E+ Q E + D + +E+ AGG E +A L RMY+++AE Sbjct: 83 LEELEKKQPIMEHDIQIELIPKDPNDEKNVVMEIRGAAGGDEGNIFAGDLFRMYSKYAES 142 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + +K E + E G + +IKG Y +K E G HR+ R+ ++ R HTS + Sbjct: 143 QGWKIEIEDAQPSEAGGYSLISFIIKGNGVYSKMKFESGSHRVQRVPKTETQGRVHTSTA 202 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P ++ ++I+I D RIDTYR+SGAGGQH+N TDSAVRITHIPTG+V Q R Sbjct: 203 TVLVMPEAEE-VDIDIDPKDLRIDTYRSSGAGGQHINKTDSAVRITHIPTGIVATSQDGR 261 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQH N+A+A LR ++YE +L REE +G + +IG G +IR+Y P V Sbjct: 262 SQHDNRAKAMQSLRTRVYEAKL--REEEEKLGNERRNKIGSGDRAEKIRTYNY-PQNRVT 318 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R + +++G L+ + A + Sbjct: 319 DHRIGLTIQQLDRIMEGKLEPIIDALI 345 >gi|30265352|ref|NP_847729.1| peptide chain release factor 1 [Bacillus anthracis str. Ames] gi|42784501|ref|NP_981748.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987] gi|47530891|ref|YP_022240.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames Ancestor'] gi|222098801|ref|YP_002532859.1| peptide chain release factor 1 [Bacillus cereus Q1] gi|46576768|sp|Q81JX1|RF1_BACAN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61214595|sp|Q630R9|RF1_BACCZ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61214623|sp|Q6HAV4|RF1_BACHK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61214641|sp|Q72XC2|RF1_BACC1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790861|sp|B9IRW2|RF1_BACCQ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|30260030|gb|AAP29215.1| peptide chain release factor 1 [Bacillus anthracis str. Ames] gi|42740433|gb|AAS44356.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987] gi|47506039|gb|AAT34715.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames Ancestor'] gi|221242860|gb|ACM15570.1| peptide chain release factor 1 [Bacillus cereus Q1] Length = 355 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 123/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D AV+ R LN DP + + + + +E+ + + +E +D +L D Sbjct: 1 MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125 +LE L+ + +++E L+ E + +L D ND +EV A Sbjct: 61 AKAMLEDKLDAEMREMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVRGAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E Sbjct: 119 GGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFEN 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ VNT Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQSVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K Sbjct: 238 TMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQA 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 VGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 341 >gi|163803384|ref|ZP_02197260.1| putative peptide chain release factor 2 [Vibrio sp. AND4] gi|159172846|gb|EDP57688.1| putative peptide chain release factor 2 [Vibrio sp. AND4] Length = 193 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 84/179 (46%), Positives = 121/179 (67%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W A+ L +ER L+ + I +++ + D LLELA+EE+D E L Sbjct: 1 MWNEPERAQALGKERASLEAIVETIVQLEQGVEDVEGLLELAVEEEDQETFDEIEPELAE 60 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++E +F + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK+E Sbjct: 61 LEGKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEV 120 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 +E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP Sbjct: 121 IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYP 179 >gi|332637164|ref|ZP_08416027.1| peptide chain release factor 1 [Weissella cibaria KACC 11862] Length = 361 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 117/341 (34%), Positives = 180/341 (52%), Gaps = 14/341 (4%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V R ++ DP + + L +E L + K +D + D + E L E Sbjct: 12 VDRYDEISEMISDPDVISDTQRFMALSKEEGSLRETVETFKRYKD-VVDGIEGNEEMLNE 70 Query: 80 D--DCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTESQDW 133 D + + D L+ +K E E +Q + LL D + +E+H AGG E + Sbjct: 71 GLGDAELEEMAKDELKELKAEKETLEEQIKILLLPKDPNDDKNIIMEIHGAAGGDEGALF 130 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L MY R+AEK+ + E ++ + E G K L+I G N Y LK E G HR+ R+ Sbjct: 131 AADLYDMYQRYAEKQGWNVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENGAHRVQRV 190 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS +++ V P +D ++IEI + D R+D YR+SGAGGQHVN T SAVR+T Sbjct: 191 PETESAGRVHTSTATVGVMPEYED-VDIEIEDKDLRVDVYRSSGAGGQHVNKTSSAVRMT 249 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+P+G+VV Q +RSQ +N+A+A +L+A++Y+ + E A E KT +G G Sbjct: 250 HLPSGIVVAMQDQRSQQQNRAKALEILKARVYDYYASQNE--AEYAEQRKTAVGTGDRSE 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + +++G+L+D + A + Sbjct: 308 RIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALI 347 >gi|260888149|ref|ZP_05899412.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185] gi|330840016|ref|YP_004414596.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185] gi|260862178|gb|EEX76678.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185] gi|329747780|gb|AEC01137.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185] Length = 355 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 119/335 (35%), Positives = 189/335 (56%), Gaps = 15/335 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDC 82 L + DP + ++ + + L RE L + +E +++ L + + + + D Sbjct: 15 LESLISDPAVLADMPKWQKLSREHAQLAPVVEKYREYKKVREGLLEAKAIFDDNPDADMR 74 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLR 139 + +E L R +LE ++ LL + D NDA +E+ G GG E+ +A L R Sbjct: 75 RLAEEEIAEL-RPRLEALERELPILLLPK-DPNDAKNVIVEIRGGVGGEEAALFAGDLFR 132 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+AE+R ++ + ++ + E G K + G AY +LK E G HR+ R+ +S+ Sbjct: 133 MYARYAERRGWRVDVIDKNATEIGGFKEIAFSVDGAGAYSFLKYESGTHRVQRVPVTESS 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V P + +E+EI+ +D RIDTY ASGAGGQ+VN T++A+RITH+PTG+ Sbjct: 193 GRIHTSAVTVAVLPEAE-EVEVEIAPADLRIDTYCASGAGGQYVNRTETAIRITHLPTGI 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VVQCQ E+SQ KNK +A +LRA++ LE + E+ A + K+++G G +IR+Y Sbjct: 252 VVQCQDEKSQLKNKEKAMRVLRARI--LEAAREEQAATVAADRKSQVGSGDRSERIRTYN 309 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V D R + + VLDGDLD+ + A + Sbjct: 310 F-PQGRVTDHRIGLTLHKLAAVLDGDLDELLAALI 343 >gi|194699680|gb|ACF83924.1| unknown [Zea mays] Length = 174 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 82/158 (51%), Positives = 115/158 (72%), Gaps = 1/158 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 LLSG D A + + AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGIK Sbjct: 4 LLSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIK 63 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISE 225 SAT+ ++G AYG+L GE+G HR+VR SP+++ R TSF+ + V P++ ++S+ ++I E Sbjct: 64 SATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPE 123 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 D I RA G GGQ+VN ++AVR+ HIPTG+ V+C Sbjct: 124 EDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRC 161 >gi|320538185|ref|ZP_08038080.1| peptide chain release factor 1 [Treponema phagedenis F0421] gi|320145002|gb|EFW36723.1| peptide chain release factor 1 [Treponema phagedenis F0421] Length = 371 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 118/335 (35%), Positives = 180/335 (53%), Gaps = 27/335 (8%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + +DP L +NV K +MR QH ++ ++ D D + E L+E + +E+ Sbjct: 33 EVQDPDLVKNVARYKDVMR--QH-----GYLSKLMDEY-DFYLQTEKQLQEAHALMQEES 84 Query: 89 SDNLQRIKLEVEYKQFESLLSGEAD------------SNDAYLEVHAGAGGTESQDWANM 136 L+ + E + + L EAD + +E+ G GG E+ +A Sbjct: 85 DHELKEMAREEMHALEKQLEQSEADLKMLLIPPDPMEEKNIIMEIRGGTGGDEAALFAAD 144 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L +MYT +AE + + E ++ ++ E G K I G YG L+ E GVHR+ R+ Sbjct: 145 LFKMYTHYAESKNWTYEIMDANETELGGFKEIVFSISGKYVYGSLRYESGVHRVQRVPET 204 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 + + R HTS ++ V P +++ EI I D R+D RA G GGQ VNTTDSAVR+THIP Sbjct: 205 EGSGRIHTSAVTVAVLPEAEET-EIVIKPEDLRVDVMRAGGPGGQSVNTTDSAVRLTHIP 263 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV CQ E+SQ KNKA+A +LR++LY+LE K+ + ++ K+++G G +IR Sbjct: 264 TGMVVICQDEKSQIKNKAKALRVLRSRLYDLEESKKNQ--ERAQNRKSQVGSGDRSERIR 321 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +Y P V D R N+ VL GDLD+ ++ Sbjct: 322 TYNF-PQNRVTDHRINLTLYQLDAVLQGDLDEIIE 355 >gi|331701218|ref|YP_004398177.1| peptide chain release factor 1 [Lactobacillus buchneri NRRL B-30929] gi|329128561|gb|AEB73114.1| Peptide chain release factor 1 [Lactobacillus buchneri NRRL B-30929] Length = 360 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 116/350 (33%), Positives = 194/350 (55%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +FD + V R LN DP + + + L +E L + ++ K+ Q +L D Sbjct: 4 IFDKLQSVVDRYDELNELISDPEVIADTQKFMKLSKEEADLRDTVAAFKKYQKVSKQLDD 63 Query: 69 NLILLELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125 + +L +++D +++++ TS ++ KLE + K LL + D + +E+H A Sbjct: 64 DKEMLREKIDDDLEAMVKDEITSLTDEKDKLEDQMKVM--LLPKDPNDDKNIIMEIHGAA 121 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E +A L MY+++AE++ +K E ++ ++ E G K L+I G Y LK E Sbjct: 122 GGDEGSLFAADLFSMYSKYAERQGWKVEIIDKNETEVGGFKEIVLMITGDKVYSKLKYEN 181 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ V P +D ++I+I D R+D YR+SGAGGQH+N Sbjct: 182 GAHRVQRVPVTESAGRVHTSTATVGVMPEEED-VDIDIDPKDIRVDVYRSSGAGGQHINK 240 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+TH+PTG+VV Q ERSQ +N+ +A +L+A++Y+ Q+ ++ N K+ Sbjct: 241 TSSAVRMTHLPTGIVVAMQDERSQQQNRQKAMKILKARVYDYYAQQEQDQYNA--ERKSA 298 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IG G +IR+Y P V D R + +++G+LD+ + A + Sbjct: 299 IGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIV 347 >gi|237750909|ref|ZP_04581389.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879] gi|229373354|gb|EEO23745.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879] Length = 356 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 121/321 (37%), Positives = 175/321 (54%), Gaps = 25/321 (7%) Query: 45 LMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 L +E+ D ++ KE + D + N LLE D + + + L+ +LE+ Sbjct: 35 LSKEKSESDEIVAKAKEYLKVLDDITSNKALLE------DKELGELAKEELK--ELEIAQ 86 Query: 102 KQFE---SLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 K E +L D ND YLE+ AG GG E+ + L Y R+A+ +++K E + Sbjct: 87 KNLEDEIKILLIPKDPNDKKNIYLEIRAGTGGDEAGIFVGDLFSAYCRYADSKQWKVEII 146 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 + G K L+KG AY LK E G HR+ R+ +S R HTS ++ + P V Sbjct: 147 SSSENSVGGYKEMIALVKGDGAYSRLKYEGGTHRVQRVPKTESQGRIHTSAITVAIMPEV 206 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D S+EI I+ +D +ID +R+ G GGQ VNTTDSAVRITHIPTG+ V Q E+SQHKNK + Sbjct: 207 D-SLEININPNDLKIDVFRSGGHGGQSVNTTDSAVRITHIPTGISVSMQDEKSQHKNKDK 265 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332 A +L+A+LYE EL+ + A ES K ++G G +IR+Y P + D R N+ Sbjct: 266 ALKILQARLYEAELEAQN--AQNRESRKNQVGSGDRSERIRTYNY-PQNRMSDHRINLTL 322 Query: 333 TSPSDV-LDGDLDDFMKATLA 352 S ++ L GDLD + +A Sbjct: 323 YSLEEIMLSGDLDKVIDPLIA 343 >gi|296116158|ref|ZP_06834776.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC 23769] gi|295977264|gb|EFG84024.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC 23769] Length = 353 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 144/242 (59%), Gaps = 7/242 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD A LE+ AGG E+ +A + Y R+A++R ++ E LE + E G++ Sbjct: 101 EADDRSAILEIRPAAGGDEAALFAGQMFGAYQRYADQRGWRFEILEYDESELGGLREGIA 160 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G + LK E GVHR+ R+ +S R HTS ++ V P ++ +++EI+++D RI Sbjct: 161 SITGRGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEE-VDVEINDNDLRI 219 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D YRASGAGGQHVN T+SAVRITH+P+G+VV Q+E+SQHKN+A+A +LRA+LYE Sbjct: 220 DVYRASGAGGQHVNKTESAVRITHMPSGIVVAMQEEKSQHKNRAKAMKILRARLYERNRA 279 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E ++++G G +IR+Y P V D R + V+ G+ D+F+ Sbjct: 280 AAHE--TRAADRRSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLYKIDKVMGGEFDEFV 336 Query: 348 KA 349 A Sbjct: 337 DA 338 >gi|149907580|ref|ZP_01896327.1| peptide chain release factor 1 [Moritella sp. PE36] gi|149809250|gb|EDM69179.1| peptide chain release factor 1 [Moritella sp. PE36] Length = 362 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 119/336 (35%), Positives = 190/336 (56%), Gaps = 29/336 (8%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-----------NLILLELALEED 80 +P + + + L +E L+ +S KE QD D + + E+A+EE Sbjct: 25 EPEIISDQDRYRALTKEYSQLEELVSCFKEYQDAKEDFESAEEMLKDEDPDMREMAVEE- 83 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 +E+ + R+ E+E L DSN+ +LE+ AGAGG E+ +A L RM Sbjct: 84 ----YKESKATVARVSDELEVLL---LPRDPNDSNNCFLEIRAGAGGDEAAIFAGDLYRM 136 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y+R+AEK+ ++ + + + ++ G K + ++G +G +K E G HR+ R+ +S Sbjct: 137 YSRYAEKKGWRLTIMNLSNSDQGGYKEVIVKMEGEAVFGTMKFESGGHRVQRVPETESQG 196 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V P V + I I+ +D ++DT+RASGAGGQHVN TDSAVRITHIPTG V Sbjct: 197 RIHTSACTVVVMPEVPEVDAIVINTADLKVDTFRASGAGGQHVNKTDSAVRITHIPTGTV 256 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEIGWG---RQIRSY 315 V+CQ ERSQHKN+A+A ++L+A++ E +K A + E S ++ + G +IR+Y Sbjct: 257 VECQDERSQHKNRARAMSILQARIQAAEDEK----ARLEEESTRRSLVASGDRSERIRTY 312 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V D R N+ ++V++G+LD ++ + Sbjct: 313 NY-PQGRVSDHRINLTLYRLNEVMEGELDVLIQPII 347 >gi|159044282|ref|YP_001533076.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12] gi|189039970|sp|A8LLU7|RF1_DINSH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157912042|gb|ABV93475.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12] Length = 351 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 104/244 (42%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A +E+ G GG E+ +A LLRMY R+AE + ++ + + E GIK Sbjct: 101 ADARPAMIEIRPGTGGEEAALFAGDLLRMYQRYAEAQGWRFQIVSESLTELGGIKEVIAH 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +S R HTS +++ V P + +++I+I SD RID Sbjct: 161 VSGSGVFAKLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAE-AVDIDIPASDIRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITHIPTG+VV E+SQH+N+ A +LRA+LY+LE Q+ Sbjct: 220 TMRASGAGGQHVNTTDSAVRITHIPTGLVV-TSSEKSQHRNRDIAMQVLRARLYDLERQR 278 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + A + K ++G G +IR+Y P + D R N+ V+ GDLD+ + Sbjct: 279 AD--AERSAARKGQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIA 335 Query: 349 ATLA 352 A A Sbjct: 336 ALAA 339 >gi|49188164|ref|YP_031417.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne] gi|49480414|ref|YP_039322.1| peptide chain release factor 1 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140231|ref|YP_086598.1| peptide chain release factor 1 [Bacillus cereus E33L] gi|118480364|ref|YP_897515.1| peptide chain release factor 1 [Bacillus thuringiensis str. Al Hakam] gi|165871326|ref|ZP_02215975.1| peptide chain release factor 1 [Bacillus anthracis str. A0488] gi|167636684|ref|ZP_02394972.1| peptide chain release factor 1 [Bacillus anthracis str. A0442] gi|170688145|ref|ZP_02879356.1| peptide chain release factor 1 [Bacillus anthracis str. A0465] gi|170709368|ref|ZP_02899781.1| peptide chain release factor 1 [Bacillus anthracis str. A0389] gi|177651841|ref|ZP_02934424.1| peptide chain release factor 1 [Bacillus anthracis str. A0174] gi|217962818|ref|YP_002341396.1| peptide chain release factor 1 [Bacillus cereus AH187] gi|218906507|ref|YP_002454341.1| peptide chain release factor 1 [Bacillus cereus AH820] gi|225867310|ref|YP_002752688.1| peptide chain release factor 1 [Bacillus cereus 03BB102] gi|227818092|ref|YP_002818101.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684] gi|228917938|ref|ZP_04081474.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930337|ref|ZP_04093341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936614|ref|ZP_04099408.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228949050|ref|ZP_04111322.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229094441|ref|ZP_04225513.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42] gi|229124833|ref|ZP_04254011.1| Peptide chain release factor 1 [Bacillus cereus 95/8201] gi|229142072|ref|ZP_04270597.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26] gi|229187555|ref|ZP_04314695.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1] gi|229199455|ref|ZP_04326118.1| Peptide chain release factor 1 [Bacillus cereus m1293] gi|229601300|ref|YP_002869544.1| peptide chain release factor 1 [Bacillus anthracis str. A0248] gi|254686248|ref|ZP_05150107.1| peptide chain release factor 1 [Bacillus anthracis str. CNEVA-9066] gi|254724243|ref|ZP_05186027.1| peptide chain release factor 1 [Bacillus anthracis str. A1055] gi|254735257|ref|ZP_05192966.1| peptide chain release factor 1 [Bacillus anthracis str. Western North America USA6153] gi|254744460|ref|ZP_05202140.1| peptide chain release factor 1 [Bacillus anthracis str. Kruger B] gi|254755798|ref|ZP_05207830.1| peptide chain release factor 1 [Bacillus anthracis str. Vollum] gi|254762138|ref|ZP_05213984.1| peptide chain release factor 1 [Bacillus anthracis str. Australia 94] gi|301056797|ref|YP_003795008.1| peptide chain release factor 1 [Bacillus anthracis CI] gi|49182091|gb|AAT57467.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne] gi|49331970|gb|AAT62616.1| peptide chain release factor 1 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51973700|gb|AAU15250.1| peptide chain release factor 1 [Bacillus cereus E33L] gi|118419589|gb|ABK88008.1| bacterial peptide chain release factor 1 (bRF-1) [Bacillus thuringiensis str. Al Hakam] gi|164712993|gb|EDR18521.1| peptide chain release factor 1 [Bacillus anthracis str. A0488] gi|167527884|gb|EDR90706.1| peptide chain release factor 1 [Bacillus anthracis str. A0442] gi|170125716|gb|EDS94630.1| peptide chain release factor 1 [Bacillus anthracis str. A0389] gi|170667838|gb|EDT18590.1| peptide chain release factor 1 [Bacillus anthracis str. A0465] gi|172082545|gb|EDT67609.1| peptide chain release factor 1 [Bacillus anthracis str. A0174] gi|217065190|gb|ACJ79440.1| peptide chain release factor 1 [Bacillus cereus AH187] gi|218537315|gb|ACK89713.1| peptide chain release factor 1 [Bacillus cereus AH820] gi|225787237|gb|ACO27454.1| peptide chain release factor 1 [Bacillus cereus 03BB102] gi|227005978|gb|ACP15721.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684] gi|228584031|gb|EEK42186.1| Peptide chain release factor 1 [Bacillus cereus m1293] gi|228595922|gb|EEK53602.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1] gi|228641361|gb|EEK97667.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26] gi|228658624|gb|EEL14286.1| Peptide chain release factor 1 [Bacillus cereus 95/8201] gi|228688978|gb|EEL42805.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42] gi|228810623|gb|EEM56972.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823049|gb|EEM68887.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829323|gb|EEM74956.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841735|gb|EEM86846.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265708|gb|ACQ47345.1| peptide chain release factor 1 [Bacillus anthracis str. A0248] gi|300378966|gb|ADK07870.1| peptide chain release factor 1 [Bacillus cereus biovar anthracis str. CI] gi|324329278|gb|ADY24538.1| peptide chain release factor 1 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 358 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 16/350 (4%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNDVLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVH 122 L D +LE L+ + +++E L+ E + +L D ND +EV Sbjct: 61 LKDAKAMLEDKLDAEMREMVKEEVSELE--SQEKTLSERLKILLVPKDPNDDKNVIVEVR 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK Sbjct: 119 GAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ Sbjct: 179 FENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ Sbjct: 238 VNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNR 295 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 296 KQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|218296205|ref|ZP_03496961.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23] gi|218243277|gb|EED09807.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23] Length = 354 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 110/323 (34%), Positives = 175/323 (54%), Gaps = 10/323 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + ++ + L R + I+ I+E + ++ ++L +E LE+ + + + Sbjct: 21 DPEVLKDQKRYQALSRRYAEMGEIIALIREYR-KVLEDLEGVESLLEDPELREVAKAEKE 79 Query: 92 LQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + E K+ E L D DA +E+ AG GG E+ +A LL MY R+AE+ Sbjct: 80 ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFAEEMG 139 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+TE L+ + + G ++GP AYG K E GVHR+ R+ ++ R HTS +++ Sbjct: 140 FETEILDSNPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATV 199 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++S + +++ + RID RASG GGQ VNTTDSAVR+ H+PTG++V CQ RSQ Sbjct: 200 AVLPKAEES-DFQLNMDEVRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326 KN+ +A +LR++L LE+++ EE + ++ +IG G +IR+Y P V D Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAEKLRQARLAQIGTGERSEKIRTYNF-PQSRVTDH 315 Query: 327 RTNIEKTSPSDVLDGDLDDFMKA 349 R VL G L ++A Sbjct: 316 RIGFTTHDLEGVLSGKLQPLLEA 338 >gi|153874211|ref|ZP_02002515.1| Peptide chain release factor 1 [Beggiatoa sp. PS] gi|152069325|gb|EDN67485.1| Peptide chain release factor 1 [Beggiatoa sp. PS] Length = 361 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 100/240 (41%), Positives = 152/240 (63%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+++ +LEV AG GG E+ +A L+RMY+R+AE++ ++ E L + GE G K + I Sbjct: 109 DNSNTFLEVRAGTGGDEAALFAGDLVRMYSRYAEQQNWQIEILSQNHGEHGGFKEIIMRI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y K E G HR+ R+ +S R HTS ++ + P V++ EIEI+ +D R DT Sbjct: 169 TGEGVYSRFKFESGGHRVQRVPETESQGRIHTSACTVAIMPEVEEVEEIEINNADIREDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+R+TH+PTG+V++CQ ERSQHKN+A+A ++L+A+L E +++ Sbjct: 229 FRASGAGGQHVNKTDSAIRLTHLPTGIVIECQDERSQHKNRARAKSLLQARLLAAERERQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMK 348 A E+ + +G G +IR+Y P + D R + D+L G+LDD ++ Sbjct: 289 R--AEKAETRRNLVGSGDRSERIRTYNF-PQGRITDHRIGLTLYKLDDILKQGNLDDLIE 345 >gi|212703639|ref|ZP_03311767.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098] gi|212672934|gb|EEB33417.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098] Length = 356 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 141/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMYTR+AE + +K E + + G K LI Sbjct: 105 DEKNTILEIRAGTGGEEAALFAADLFRMYTRYAEIKGWKVEIMSESPSDSGGYKEIICLI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ ++ R HTS +++ V P ++ +++EI D RID Sbjct: 165 SGDRVYSHLKFEAGTHRVQRVPATETQGRIHTSAATVAVMPEAEE-VDVEIRPEDLRIDI 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN T+SAVRITHIPTG VV CQ ERSQHKNKA+A +L +++ E +++ Sbjct: 224 YRASGAGGQHVNKTESAVRITHIPTGTVVTCQDERSQHKNKARAMKVLASRILAAERERQ 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + K ++G G +IR+Y P D R N+ S +++G+++ +A Sbjct: 284 N--SELSADRKAQVGSGDRSERIRTYNF-PQGRCTDHRINLTLYSLDRIMEGEVEPLFEA 340 >gi|302384870|ref|YP_003820692.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1] gi|302195498|gb|ADL03069.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1] Length = 358 Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 95/243 (39%), Positives = 148/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGAGG E+ +A+ L RMY +AE +K E + +++ G K +I Sbjct: 106 DDKNIILEIRAGAGGDEAALFASELYRMYVNYAEGHHWKVELISVNENGIGGFKEVVAMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E GVHR+ R+ +S R HTS +++ V P ++ ++ I + D RID Sbjct: 166 TGKGAYSKMKYESGVHRVQRVPETESGGRIHTSTATVAVMPEAEE-FDVVIEDKDVRIDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +NK +A+ +LR+KLY++EL+KR Sbjct: 225 MRASGNGGQCVNTTDSAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKR 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + E +++IG G +IR+Y P V D R + +++GD+ + + + Sbjct: 285 QN--SEAEERRSQIGTGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDS 341 Query: 350 TLA 352 +A Sbjct: 342 LIA 344 >gi|237802457|ref|YP_002887651.1| peptide chain release factor 1 [Chlamydia trachomatis B/Jali20/OT] gi|231273691|emb|CAX10469.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis B/Jali20/OT] Length = 359 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 119/343 (34%), Positives = 187/343 (54%), Gaps = 21/343 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76 ++RL + + DP+++ N E L +E L NA + + L D+ + L Sbjct: 9 LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTE 68 Query: 77 LEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTES 130 + + ++L+E + ++R+ KQ E+LL +D +E+ AG GG E+ Sbjct: 69 KDPEIVAMLEEGVLVGEEAVERLS-----KQLENLLIPPHPDDDLSVIMELRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + +RMY +A + ++ E L + + G K + I G + +L+ E G HR+ Sbjct: 124 ALFVGDCVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 R+ ++ R HTS ++ V P +D E+ I E D RIDT+R+SGAGGQHVN TDSA Sbjct: 184 QRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+GVVV CQ ERSQHKNKA+A +L+A++ + E+QKR + A+ S+ ++G G Sbjct: 244 VRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSA--QVGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + + V++G+LD A Sbjct: 302 DRSERIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTA 343 >gi|227824241|ref|ZP_03989073.1| peptide chain release factor [Acidaminococcus sp. D21] gi|226904740|gb|EEH90658.1| peptide chain release factor [Acidaminococcus sp. D21] Length = 359 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 109/335 (32%), Positives = 185/335 (55%), Gaps = 14/335 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLELALEEDDC 82 L K DP + + + + + L + + + ++Q D+ LLE+ +++ Sbjct: 18 LEAKISDPSVISDQAQWQKYTKAHAKLTDVVETYRAYQKLQKTYDDDQALLEMGESDEEL 77 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLR 139 + + E +LE +Y++ ++L D ND +E+ AGAGG E+ +A L R Sbjct: 78 AAMAEMEMKELAPQLE-DYEKRLTILLLPKDPNDEKNIIMEIRAGAGGDEAALFAGDLFR 136 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MYTR+AE + ++ E ++ G K ++ G + Y +K E GVHR+ R+ ++ Sbjct: 137 MYTRYAETKGWRVELMDSSPTGLGGFKEVIFMVSGSDVYSHMKFESGVHRVQRVPETEAQ 196 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ V P ++ ++++I SD RIDTYRA GAGGQ+VN T+SAVR+THIPTG+ Sbjct: 197 GRIHTSTATVAVMPEAEE-VDVDIKMSDIRIDTYRAGGAGGQYVNKTESAVRMTHIPTGI 255 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 V QCQ E+SQ KN+ + +LR+++YE + + ++++G G +IR+Y Sbjct: 256 VAQCQDEKSQAKNREKCLRVLRSRIYEAAQEAQRAAEE--SERRSQVGTGDRSERIRTYN 313 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V D R + +DV++GDLD+ + A + Sbjct: 314 F-PQGRVTDHRIGLTLHKLTDVMNGDLDELLGALM 347 >gi|329770544|ref|ZP_08261922.1| peptide chain release factor 1 [Gemella sanguinis M325] gi|328836293|gb|EGF85962.1| peptide chain release factor 1 [Gemella sanguinis M325] Length = 362 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 123/339 (36%), Positives = 190/339 (56%), Gaps = 17/339 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLM---RERQHLDNAISFIKEIQD---RLCDNLILLE 74 +R LN DP + V + K LM +E++ ++ +S +E +D ++ D LLE Sbjct: 12 ERYEKLNELLSDPDV---VSDTKKLMEYSKEQRSIEKTVSVFREYKDIVQQINDTKELLE 68 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133 + +++ ++QE L+ +E + LL + D + +EV AGG E+Q + Sbjct: 69 IEDDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQLF 128 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A LLRMYTR+AE + +K + LE + GIK A +I G + Y +K E G HR+ R+ Sbjct: 129 AGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQRV 188 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S+ R HTS +++ V P ++ +E+D R+DT+ +SGAGGQ VNTT SAVR+T Sbjct: 189 PTTESSGRIHTSTATVVVLPEAEEVEIEI-NENDIRVDTFASSGAGGQSVNTTMSAVRLT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTGVVV Q ERSQ KNK +A +LRA++Y+ Q EE A K+++G G Sbjct: 248 HIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQ--EEQAKFDAERKSKVGTGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + +++G LD+ ++A Sbjct: 306 RIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEA 343 >gi|302392966|ref|YP_003828786.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium arabaticum DSM 5501] gi|302205043|gb|ADL13721.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium arabaticum DSM 5501] Length = 359 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 100/238 (42%), Positives = 147/238 (61%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +A L RMY+R+AEK+ + + + E G K ++ Sbjct: 109 DEKNVIVEIRAGTGGDEAALFAGELYRMYSRYAEKQDWDVDIMSSSSSEVGGFKEMIFVV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S+ R HTS +++ V P +D ++IEI+++D I+T Sbjct: 169 EGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTATVAVLPEAED-VDIEINQNDLTIET 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVRITH PTGVVV CQ E+SQHKNK +A +LR+++ E + Sbjct: 228 YRSSGPGGQSVNTTDSAVRITHEPTGVVVSCQDEKSQHKNKRKAMRVLRSRIQ--EKIEA 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E+ A E K +IG G +IR+Y P + D R N+ +LDG++D+ + Sbjct: 286 EKQAEEAEKRKMQIGSGGRSERIRTYNF-PQGRITDHRINLTTHQMESILDGEIDELV 342 >gi|116625721|ref|YP_827877.1| peptide chain release factor 1 [Candidatus Solibacter usitatus Ellin6076] gi|122252101|sp|Q01RX8|RF1_SOLUE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116228883|gb|ABJ87592.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Solibacter usitatus Ellin6076] Length = 362 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 118/341 (34%), Positives = 186/341 (54%), Gaps = 14/341 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D +R L + DP + + + + + + + L + + +E + ++ D L Sbjct: 8 DQLEKRFDELTQQMADPAVISDADQYRKVAKAQSELSDIAAKYREWK-KVEDGLAQARPM 66 Query: 77 LEEDDCSILQETSD----NLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQ 131 L+E D L+E ++ L+ KL +E + LL + D + LE+ AG GG E+ Sbjct: 67 LQEQDAE-LKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAGTGGDEAT 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A + RMY+R+AE + +K E + G+K L+ G Y LK E GVHR+ Sbjct: 126 LFAAEIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ + R HTS ++ V P D+ +E+++ D RIDT+ +SG GGQ VNTT SAVR Sbjct: 186 RVPVTEQQGRVHTSAITVAVLPEADE-VEVKLEAKDIRIDTFCSSGPGGQSVNTTYSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KN+A+A +LR++LYELEL+K++ A +G +T +G G Sbjct: 245 ITHLPTGLVVSCQDEKSQIKNRAKAERVLRSRLYELELEKQQ--AALGAERRTMVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + V++G +D + A Sbjct: 303 SEKIRTYNF-PQNRVSDHRIGLTLHQLDFVMEGKMDAIVDA 342 >gi|172040385|ref|YP_001800099.1| peptide chain release factor 1 [Corynebacterium urealyticum DSM 7109] gi|171851689|emb|CAQ04665.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM 7109] Length = 371 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 123/344 (35%), Positives = 186/344 (54%), Gaps = 17/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP L + A+ + + Q L I + + D+ E+ Sbjct: 21 MDDILSEYQGLEAQLADPELHNDPKAARRVGKRFQELQPVIQTYERLNTAREDHEAAAEM 80 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSN--DAYLEVHAGAGGTESQ 131 A E D +E + R++ E+E Q LL+ N D +E+ +GAGG E+ Sbjct: 81 ASE--DAEFAEEAT----RLEAEIEELQEKLTDLLAPRDPKNGDDIIMEIKSGAGGEEAA 134 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPN---AYGWLKGEQG 186 +A L RMY R+AE+ F TE L +++ + G+K T+ I K P+ A+ K E G Sbjct: 135 LFAGELARMYQRYAERHGFATEVLGLNETDLGGVKDMTMSIRSKQPSRDGAWADFKFEGG 194 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R TS + + VYP D+ ++EI E D R+D YR+SG GGQ VNTT Sbjct: 195 VHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKDIRVDVYRSSGKGGQGVNTT 254 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305 DSAVRITH+PTGVVV CQ+ERSQ +N+A+A +L A+L +++ ++ E A G +++ Sbjct: 255 DSAVRITHLPTGVVVTCQKERSQIQNRARAMQVLAARLQQMKEEEAEAEAAEGRAAQIRT 314 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +IR+Y P V D R + + VLDGDL+ A Sbjct: 315 MDRSERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLESLFAA 357 >gi|169351467|ref|ZP_02868405.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552] gi|169291689|gb|EDS73822.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552] Length = 358 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 114/314 (36%), Positives = 174/314 (55%), Gaps = 25/314 (7%) Query: 45 LMRERQHLDNAISFIKEI---QDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVE 100 L +E + ++N I KE+ D + +ELA LEE +++ KLE+E Sbjct: 51 LYQEYKEIENGIEEAKELAKEHDPEIKEMAKMELAELEEKLPDVIK---------KLEIE 101 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 + D+ D +E+ AGG E +A L RMY ++AE + +K E +E D Sbjct: 102 L-----IPKDPNDNKDVIMEIRGAAGGDEGNIFAGDLYRMYVKYAESQGWKVEVMEAIDA 156 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G + ++KG YG LK E G HR+ R+ ++ R HTS +++ V P V++ ++ Sbjct: 157 EAGGYSLISFMVKGEGVYGKLKFESGSHRVQRVPKTETQGRVHTSTATVLVMPEVEE-VD 215 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI+++D RIDTYRASGAGGQH+N TDSAVRITHIPTG+V Q RSQH NK +A L Sbjct: 216 VEINKNDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAASQDGRSQHDNKDKAMKAL 275 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 A++Y+ Q+++ + K+++G G +IR+Y P V D R + Sbjct: 276 IARIYDYYQQQQD--QQVESERKSKVGTGDRAEKIRTYNY-PQNRVTDHRIGLTIQQLDR 332 Query: 338 VLDGDLDDFMKATL 351 +++G LDD + A + Sbjct: 333 IIEGKLDDIITALI 346 >gi|15604741|ref|NP_219525.1| peptide chain release factor 1 [Chlamydia trachomatis D/UW-3/CX] gi|76788735|ref|YP_327821.1| peptide chain release factor 1 [Chlamydia trachomatis A/HAR-13] gi|237804372|ref|YP_002888526.1| peptide chain release factor 1 [Chlamydia trachomatis B/TZ1A828/OT] gi|255310824|ref|ZP_05353394.1| peptide chain release factor 1 [Chlamydia trachomatis 6276] gi|255317124|ref|ZP_05358370.1| peptide chain release factor 1 [Chlamydia trachomatis 6276s] gi|7388050|sp|O84026|RF1_CHLTR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361522|sp|Q3KMZ9|RF1_CHLTA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|3328413|gb|AAC67613.1| Peptide Chain Releasing Factor (RF-1) [Chlamydia trachomatis D/UW-3/CX] gi|76167265|gb|AAX50273.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis A/HAR-13] gi|231272672|emb|CAX09575.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis B/TZ1A828/OT] gi|296435539|gb|ADH17713.1| peptide chain release factor 1 [Chlamydia trachomatis G/9768] gi|296436463|gb|ADH18633.1| peptide chain release factor 1 [Chlamydia trachomatis G/11222] gi|296437399|gb|ADH19560.1| peptide chain release factor 1 [Chlamydia trachomatis G/11074] gi|297139898|gb|ADH96656.1| peptide chain release factor 1 [Chlamydia trachomatis G/9301] gi|297748154|gb|ADI50700.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia trachomatis D-EC] gi|297749034|gb|ADI51712.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia trachomatis D-LC] Length = 359 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 119/343 (34%), Positives = 187/343 (54%), Gaps = 21/343 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76 ++RL + + DP+++ N E L +E L NA + + L D+ + L Sbjct: 9 LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTE 68 Query: 77 LEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTES 130 + + ++L+E + ++R+ KQ E+LL +D +E+ AG GG E+ Sbjct: 69 KDPEIVAMLEEGVLVGEEAVERLS-----KQLENLLIPPDPDDDLSVIMELRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + +RMY +A + ++ E L + + G K + I G + +L+ E G HR+ Sbjct: 124 ALFVGDCVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 R+ ++ R HTS ++ V P +D E+ I E D RIDT+R+SGAGGQHVN TDSA Sbjct: 184 QRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+GVVV CQ ERSQHKNKA+A +L+A++ + E+QKR + A+ S+ ++G G Sbjct: 244 VRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSA--QVGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + + V++G+LD A Sbjct: 302 DRSERIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTA 343 >gi|255548277|ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis] gi|223545675|gb|EEF47179.1| peptide chain release factor, putative [Ricinus communis] Length = 422 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 102/250 (40%), Positives = 152/250 (60%), Gaps = 10/250 (4%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L + +AD D LEV AG GG E+ ++ + RMY R+++K+ +K E ++I + + G K Sbjct: 163 LPTDDADERDCILEVRAGTGGEEASLFSMDIFRMYERYSQKKGWKFEVVDITESDLKGYK 222 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A+ I G +G LK E G+HR+ R+ + + R HTS S+ + P D+ +++++ Sbjct: 223 EASAAISGAGVFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADE-VDVQLRNE 281 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYR+ G+GGQH NTT+SAVR+TH+PTG+ V Q ERSQH NKA+A +L AKLYE Sbjct: 282 DLRIDTYRSGGSGGQHANTTNSAVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYE 341 Query: 287 LELQKREEIANIGESSKTE-IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +E R I ++E IG G +IR+Y P V D R I + ++++ G+ Sbjct: 342 IE---RSRIQMSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAINNMMQGE 397 Query: 343 -LDDFMKATL 351 LD F+ A L Sbjct: 398 SLDVFIDALL 407 >gi|149204050|ref|ZP_01881018.1| peptide chain release factor 1 [Roseovarius sp. TM1035] gi|149142492|gb|EDM30537.1| peptide chain release factor 1 [Roseovarius sp. TM1035] Length = 417 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 103/256 (40%), Positives = 148/256 (57%), Gaps = 14/256 (5%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L EAD+ A LE+ G GG E+ + L+RMY R++E R + E +E E Sbjct: 159 QLALLPRDEADARPAILEIRPGTGGEEAALFGADLMRMYQRYSEARGWSFEVIEEQQSEL 218 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 GI+ + I G + LK E GVHR+ R+ +S R HTS +++ V P +D ++I+ Sbjct: 219 GGIRELVVRIGGEGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIQ 277 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+ Sbjct: 278 INANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHRNREIAMQVLKT 336 Query: 283 KLYELELQKRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +LY+LE + + A +G ++E +IR+Y P + D R N+ Sbjct: 337 RLYDLERNRVDSERSANRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLE 390 Query: 337 DVLDGDLDDFMKATLA 352 VL GDLD+ + A A Sbjct: 391 QVLGGDLDEVIDALTA 406 >gi|309390220|gb|ADO78100.1| bacterial peptide chain release factor 1 (bRF-1) [Halanaerobium praevalens DSM 2228] Length = 360 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 98/242 (40%), Positives = 154/242 (63%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A L RMYTR+AE + +K + + ++ G K I Sbjct: 112 DEKNVIVEIRAGAGGDEAALFAADLYRMYTRYAEGKGWKVDLMSANESGTGGFKEIIFTI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + + +LK E GVHR+ R+ +S+ R HTS +++ V P ++ +++EI +D IDT Sbjct: 172 EGTDIFKYLKYESGVHRVQRVPSTESSGRIHTSTATVAVLPEAEE-VDVEIETNDLTIDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSA+RITH PTG+ V CQ E+SQHKNKA+A +LRA+L E + Q++ Sbjct: 231 FRSSGPGGQSVNTTDSAIRITHEPTGLTVSCQDEKSQHKNKAKAMKILRARLQEKKEQEK 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + E+ K+++G G +IR+Y P V D R N+ +LDG+L+ ++A Sbjct: 291 QKERS--EARKSQVGTGDRSEKIRTYNF-PQGRVSDHRINLTIHQLDKILDGELEPVVEA 347 Query: 350 TL 351 + Sbjct: 348 LI 349 >gi|311070220|ref|YP_003975143.1| peptide chain release factor 1 [Bacillus atrophaeus 1942] gi|310870737|gb|ADP34212.1| peptide chain release factor 1 [Bacillus atrophaeus 1942] Length = 356 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 118/340 (34%), Positives = 184/340 (54%), Gaps = 15/340 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77 +R LN DP + + + + +E+ + + + +D +L D +LE L Sbjct: 10 ERYERLNELLSDPEVVNDPNKLREYSKEQSDISETVEVYRRYRDASEQLADAKAMLEDKL 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWA 134 + + +++E LQ + E Q + LL + D ND +E+ AGG E+ +A Sbjct: 70 DAEMREMVKEEISELQD-ETEAMTDQLKLLLVPK-DPNDDKNVIMEIRGAAGGEEAALFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE + +KTE +E G K ++I G AY LK E G HR+ R+ Sbjct: 128 GNLYRMYSRYAELQGWKTEIMEASVTGTGGYKEIIIMINGKGAYSKLKYENGAHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ P ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH Sbjct: 188 ETESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFTSSGPGGQSVNTTMSAVRLTH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K+ +G G + Sbjct: 247 LPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYDQTRKSAVGTGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P V D R + +L+G LD+F+ A + Sbjct: 305 IRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEFVDALI 343 >gi|139439315|ref|ZP_01772757.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC 25986] gi|133775339|gb|EBA39159.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC 25986] Length = 355 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 119/324 (36%), Positives = 181/324 (55%), Gaps = 12/324 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL---ALEEDDC 82 L K DP + ++ E L +E H + I+ +E L D E+ + D+ Sbjct: 15 LEKKLSDPAVASDIKEFTRLNKEYAHQSDLIAASREYIGALDDIEAAKEMLRDTTDADEK 74 Query: 83 SILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 +LQ + S+N +++ E ++ + S D + +E+ + AGG E+ +A L +MY Sbjct: 75 EMLQMDISENEEKLPQLEEDIKYMLIPSDPNDDKNTIVEIRSAAGGDEAAIFAGDLYKMY 134 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+ E R +KT L+ E G KS ++G Y +K E GVHR+ R+ +S R Sbjct: 135 QRFCESRGWKTTVLDSSPSEAGGFKSIEFKVEGDRVYSVMKFESGVHRVQRVPKTESQGR 194 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 TS +++ V P ++ I+++I++SD RIDTY ASG GGQ VNTT SAVRITH+PT VV Sbjct: 195 IQTSTATVAVLPEAEE-IDVQINQSDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNTVV 253 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 Q Q++RSQ +N+ MLRA+LYE+EL+K++ A +G +++IG G +IR+Y Q Sbjct: 254 QSQEQRSQIQNREVCMQMLRARLYEMELEKQQ--AELGAERQSQIGHGNRSEKIRTYN-Q 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGD 342 P V D R T + VL GD Sbjct: 311 PQDRVTDHRIGFNSTY-NGVLLGD 333 >gi|150025963|ref|YP_001296789.1| peptide chain release factor 1 [Flavobacterium psychrophilum JIP02/86] gi|166223557|sp|A6H0W3|RF1_FLAPJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|149772504|emb|CAL43987.1| Peptide chain release factor 1 (RF-1) [Flavobacterium psychrophilum JIP02/86] Length = 357 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 95/265 (35%), Positives = 160/265 (60%), Gaps = 8/265 (3%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L+E + L ++ E+++ L+ +A D+ + +E+ AG GG E+ +A L RMYT+ Sbjct: 81 LEEAKERLPELEEEIKF----LLIPKDAEDAKNVMVEIRAGTGGDEASIFAGDLFRMYTK 136 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 + E R ++T +++++G G K + G + YG LK E GVHR+ R+ ++ R H Sbjct: 137 YCENRGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAGVHRVQRVPQTETQGRVH 196 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ V P ++ +++I +D R+D + +SG GGQ VNTT SAVR+THIPTG+V QC Sbjct: 197 TSAATVMVLPEAEE-FDVQIDMNDVRVDFFCSSGPGGQSVNTTKSAVRLTHIPTGLVAQC 255 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQM 322 Q ++SQHKNK +A+ +LR++LYE EL K++ + +S+ G +IR+Y + Sbjct: 256 QDQKSQHKNKDKAFGVLRSRLYEQELAKKQADDAVKRTSQVSSGDRSAKIRTYNYSQGR- 314 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFM 347 V D R ++ V++G + F+ Sbjct: 315 VTDHRIGLDVFDMDGVMNGKIQKFV 339 >gi|312142772|ref|YP_003994218.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus'] gi|311903423|gb|ADQ13864.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus'] Length = 357 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 99/243 (40%), Positives = 148/243 (60%), Gaps = 9/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ +GAGG E+ +A L RMY+R++E + +K E + + G K + Sbjct: 109 DEKNVIVEIRSGAGGDEAALFAADLFRMYSRYSENQGWKVEVMNANLSGVGGYKEIIFTV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y +LK E GVHR+ R+ +S+ R HTS +++ V P ++ ++I+I +D RID Sbjct: 169 EGSEVYKYLKYESGVHRVQRVPSTESSGRIHTSTATVAVLPEAEE-VDIDIDPNDLRIDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 YR+SG GGQ VNTTDSAVRITH PT + V CQ E+SQHKNKA+A +LRA++ E +E +K Sbjct: 228 YRSSGPGGQSVNTTDSAVRITHEPTEITVSCQDEKSQHKNKAKAMRILRARVQEKIESEK 287 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + A E+ K+++G G +IR+Y P V D R N+ +LDGDL + Sbjct: 288 Q---AKRAEARKSQVGTGDRSEKIRTYNF-PQGRVSDHRINLTVHQLDKILDGDLAPVID 343 Query: 349 ATL 351 A + Sbjct: 344 ALI 346 >gi|241895238|ref|ZP_04782534.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC 33313] gi|241871544|gb|EER75295.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC 33313] Length = 361 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 96/242 (39%), Positives = 144/242 (59%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+H AGG E +A L MY R+AEK+ ++ E ++ + E G K L+I Sbjct: 110 DDKNIIMEIHGAAGGDEGALFAADLYDMYVRYAEKQGWQVEIIDENKTEIGGYKEIVLMI 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y LK E G HR+ R+ +S R HTS +++ V P +D ++IEI++ D R+D Sbjct: 170 TGNNVYSKLKFENGAHRVQRVPETESAGRVHTSTATVGVMPEYED-VDIEIADKDLRVDV 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+A+A +L+A++Y+ + Sbjct: 229 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKARVYDYYASQN 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A E KT +G G +IR+Y P V D R + +++G+L D + A Sbjct: 289 E--AEYAEQRKTAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELSDVIDA 345 Query: 350 TL 351 L Sbjct: 346 LL 347 >gi|257461132|ref|ZP_05626230.1| peptide chain release factor 1 [Campylobacter gracilis RM3268] gi|257441506|gb|EEV16651.1| peptide chain release factor 1 [Campylobacter gracilis RM3268] Length = 355 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 122/333 (36%), Positives = 183/333 (54%), Gaps = 14/333 (4%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76 + R L+ DP + ++ L +E++ ++ A S +I +++ +N LL A Sbjct: 10 LDRYDELSRMLSDPAITADIANMTALSKEQRSIEPIKEAASEYLKILNQIEENKALLSDA 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135 D + +E NL+ K ++E K LL + D + +LE+ AG GG E+ +A Sbjct: 70 ---DLGELAKEELKNLETQKPQLEEKIKILLLPKDPNDDKNIFLEIRAGTGGDEAALFAG 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LL Y R+A+ R +K E + +G G K LL+KG AY LK E G HR+ R+ Sbjct: 127 DLLGAYLRYADLRGYKCEIVSTSEGSVGGYKEVILLVKGAGAYSRLKFEGGTHRVQRVPE 186 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P ++DS EI+I+ +D RID R+SG GGQ VNTTDSAVRITHI Sbjct: 187 TESQGRVHTSAITVAVMPEIEDS-EIQINPNDLRIDVMRSSGHGGQSVNTTDSAVRITHI 245 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QI 312 PTG+VV Q + QHKNK A +L+A+LY+++ Q+R E + K ++G G +I Sbjct: 246 PTGLVVTNQDGKDQHKNKEAAMKVLKARLYDMQEQERLEKER--KDRKDQVGTGDRSGRI 303 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 R+Y P + D R N+ ++ G L D Sbjct: 304 RTYNY-PQNRISDHRINLTLYRLDAIMAGGLFD 335 >gi|255037851|ref|YP_003088472.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053] gi|254950607|gb|ACT95307.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053] Length = 357 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 96/239 (40%), Positives = 149/239 (62%), Gaps = 7/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + LE+ G GG E+ +A L RMY R+ EK +++ ++ +G G K + Sbjct: 106 DSRNIILEIRGGTGGDEAAIFAGDLFRMYQRFIEKMGWRSSVMDYTEGTNGGYKEIICKV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + YG +K E GVHR+ R+ +S R HTS +S+ V P ++ ++++I+ +D RIDT Sbjct: 166 EGEDVYGKMKFESGVHRVQRVPATESQGRIHTSAASVAVLPEAEE-VDVQINMNDVRIDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +++SGAGGQ VNTT SAVR+THIP+G+VV CQ ERSQ KNK +A ++LR++LYE+EL+K Sbjct: 225 FQSSGAGGQSVNTTYSAVRLTHIPSGLVVSCQDERSQLKNKDRALSVLRSRLYEIELKKH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + I K+ +G G +IR+Y P + D R + V++GD+ D ++ Sbjct: 285 NDA--ISSQRKSMVGSGDRSDKIRTYNY-PQSRITDHRIGYTVYNLPAVMEGDIADLIE 340 >gi|166154244|ref|YP_001654362.1| peptide chain release factor 1 [Chlamydia trachomatis 434/Bu] gi|166155119|ref|YP_001653374.1| peptide chain release factor 1 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335493|ref|ZP_07223737.1| peptide chain release factor 1 [Chlamydia trachomatis L2tet1] gi|238687434|sp|B0B9D0|RF1_CHLT2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238687452|sp|B0BB09|RF1_CHLTB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|165930232|emb|CAP03717.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis 434/Bu] gi|165931107|emb|CAP06671.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 359 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 118/338 (34%), Positives = 186/338 (55%), Gaps = 21/338 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76 ++RL + + DP+++ N E L +E L NA + + L D+ + L Sbjct: 9 LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTE 68 Query: 77 LEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTES 130 + + ++L+E + ++R+ KQ E+LL +D +E+ AG GG E+ Sbjct: 69 KDPEIVAMLEEGVLVGEEAVERLS-----KQLENLLIPPDPDDDLSVIMELRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + +RMY +A + ++ E L + + G K + I G + +L+ E G HR+ Sbjct: 124 ALFVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 R+ ++ R HTS ++ V P +D E+ I E D RIDT+R+SGAGGQHVN TDSA Sbjct: 184 QRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+GVVV CQ ERSQHKNKA+A +L+A++ + E+QKR + A+ S+ ++G G Sbjct: 244 VRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSA--QVGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +IR+Y P V D R + + V++G+LD Sbjct: 302 DRSERIRTYNF-PQNRVTDHRIGLTLYNLDRVMEGELD 338 >gi|16080754|ref|NP_391582.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. 168] gi|221311662|ref|ZP_03593509.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. 168] gi|221315990|ref|ZP_03597795.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320901|ref|ZP_03602195.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325185|ref|ZP_03606479.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. SMY] gi|321313251|ref|YP_004205538.1| peptide chain release factor 1 [Bacillus subtilis BSn5] gi|1172909|sp|P45872|RF1_BACSU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|853776|emb|CAA89884.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. 168] gi|2636226|emb|CAB15718.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. 168] gi|291486285|dbj|BAI87360.1| peptide chain release factor 1 [Bacillus subtilis subsp. natto BEST195] gi|320019525|gb|ADV94511.1| peptide chain release factor 1 [Bacillus subtilis BSn5] Length = 356 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 114/339 (33%), Positives = 185/339 (54%), Gaps = 13/339 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77 +R LN DP + + + + +E+ + + ++ +D +L D +LE L Sbjct: 10 ERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLADAKAMLEEKL 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 + + +++E LQ+ + E ++ + LL D + +E+ AGG E+ +A Sbjct: 70 DAEMRDMVKEEISELQK-ETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE + +KTE +E + G K +I G AY LK E G HR+ R+ Sbjct: 129 NLYRMYSRYAELQGWKTEVMEANVTGTGGYKEIIFMITGSGAYSKLKYENGAHRVQRVPE 188 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ P ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+ Sbjct: 189 TESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 247 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K+ +G G +I Sbjct: 248 PTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDQTRKSAVGSGDRSERI 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R + +L+G LD+ ++A + Sbjct: 306 RTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALI 343 >gi|119358446|ref|YP_913090.1| peptide chain release factor 1 [Chlorobium phaeobacteroides DSM 266] gi|166223545|sp|A1BJT9|RF1_CHLPD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119355795|gb|ABL66666.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium phaeobacteroides DSM 266] Length = 357 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 122/348 (35%), Positives = 196/348 (56%), Gaps = 17/348 (4%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR------ 65 +FD A+ ++ L + DPH ++ + L +E + L I E DR Sbjct: 1 MFDKLQAIKEKHEDLEQQLLDPHAAEDQNRFRKLNKEYRDL----CSIVEAYDRYALAKK 56 Query: 66 -LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHA 123 L ++ +LL+ E+D +++Q+ +LQ LE E + LL E DS + +E+ A Sbjct: 57 QLEESRLLLKNEKEQDMRAMVQDEISSLQESILEREKQLKLLLLPKDEVDSRNVIIEIRA 116 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLK 182 G GG E+ +A L+RMY R+AE++ +K E L+ ++ G + L + G + YG +K Sbjct: 117 GTGGEEAALFAADLVRMYQRFAEQQGWKYEVLDFNESSVPGGFREIVLGVSGHDVYGTMK 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ ++ R HTS +S+ V P ++ +++EI + D R DTYR+ G GGQ+ Sbjct: 177 YESGVHRVQRVPDTETQGRIHTSAASVAVLPEAEE-VDVEIRKDDLRFDTYRSGGKGGQN 235 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGES 301 VN ++AVRITH P+G+VV CQ+ERSQ +NK +A MLRAKLY+ +L +++E+ A + S Sbjct: 236 VNKVETAVRITHQPSGIVVACQEERSQLQNKERAMKMLRAKLYDRQLAEQQEKRAGLRRS 295 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 T +IR+Y P V D R + ++ GD+ D ++A Sbjct: 296 MVTTGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGDIKDIIEA 342 >gi|170746587|ref|YP_001752847.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM 2831] gi|226739115|sp|B1M766|RF1_METRJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|170653109|gb|ACB22164.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM 2831] Length = 361 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 113/319 (35%), Positives = 176/319 (55%), Gaps = 19/319 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS------ILQETSDNLQRIKLE 98 L RE LD ++ I+ + L +NL +E ++E +E + L LE Sbjct: 36 LSRELSDLDPVVAAIRAYRAAL-ENLAGVEALIDEPGTDPEMRALAAEEKPEALA--ALE 92 Query: 99 VEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 ++ + LL AD A LEV AG GG E+ +A L RMY ++AE + ++ E + Sbjct: 93 TAHRALQLLLLPKDAADEKSAILEVRAGTGGDEAALFAGDLFRMYAKYAESKGWRVEVIS 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G G + +KG + LK E G HR+ R+ ++ R HTS +++ V P + Sbjct: 153 ESEGTVGGFREVVAEVKGRGVFARLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + ++I ++++D +IDT RA GAGGQHVN T+SA+RITH+PTG+VV Q+ERSQHKN+A+A Sbjct: 213 E-VDIHVNDADLKIDTMRAQGAGGQHVNKTESAIRITHLPTGIVVFVQEERSQHKNRARA 271 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LYE E ++ + K ++G G +IR+Y P V D R N+ Sbjct: 272 MALLRARLYEAERNAKD--SARAADRKAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 328 Query: 334 SPSDVLDGD-LDDFMKATL 351 +V+ G LD+ + A + Sbjct: 329 KLEEVMAGTALDEVVDALI 347 >gi|290969299|ref|ZP_06560824.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str. 28L] gi|290780805|gb|EFD93408.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str. 28L] Length = 360 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 95/241 (39%), Positives = 149/241 (61%), Gaps = 8/241 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLL 171 D + +E+ GAGG E+ +A L RMY ++ EK+ +K E + ++ E G K Sbjct: 108 DDKNVIMEIRGGAGGDEAALFAGDLFRMYMKYIEKQPGWKAELISANEPELGGYKEVVFS 167 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 ++G YG LK E GVHR+ R+ ++ R HTS +++ V P DD +EI++ D R+D Sbjct: 168 VEGAGVYGKLKYESGVHRVQRVPVTEAGGRIHTSTATVAVLPEADD-VEIDLDMKDVRVD 226 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +RASGAGGQH+N T SAVR+TH+P+G+VV+CQ ERSQ +N+ +A +L+A+L L+ + Sbjct: 227 YFRASGAGGQHINKTSSAVRMTHMPSGIVVECQDERSQLENRTKALRVLKARL--LDQAQ 284 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + E+ ++++G G +IR+Y P V D R N+ VL+GDLD+F++ Sbjct: 285 QAAAQEVTEARRSQVGTGDRSERIRTYNY-PQGRVTDHRINVTLYKLDAVLNGDLDEFIQ 343 Query: 349 A 349 A Sbjct: 344 A 344 >gi|225010612|ref|ZP_03701082.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C] gi|225005165|gb|EEG43117.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C] Length = 358 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 90/242 (37%), Positives = 146/242 (60%), Gaps = 3/242 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +E+ AG GG E+ +A L RMYT++ E R +KT +++ +G G K + Sbjct: 106 DAKNVVVEIRAGTGGDEASIFAGDLFRMYTKYCESRGWKTNVIDLSEGTSGGYKEIQFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS +++ V P ++ +++I D RID Sbjct: 166 NGEDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVQIDPKDVRIDF 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH+PTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K+ Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHLPTGLVAQCQDQKSQHKNKDKAFVVLRSRLYDMELAKK 284 Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +E +S+ G +IR+Y P V D R + ++++GD+ + + Sbjct: 285 QEADAAKRNSQVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIVNGDIQKILSELM 343 Query: 352 AI 353 + Sbjct: 344 LV 345 >gi|296505754|ref|YP_003667454.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171] gi|46576766|sp|Q812I4|RF1_BACCR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|296326806|gb|ADH09734.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171] Length = 355 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 121/345 (35%), Positives = 184/345 (53%), Gaps = 12/345 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D AV+ R LN DP + + + + +E+ + + +E +D +L D Sbjct: 1 MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ + +++E L+ + K E + + D + +EV AGG Sbjct: 61 AKAMLEDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P V D R + +L G LDDF+ A Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 341 >gi|114777343|ref|ZP_01452340.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1] gi|114552125|gb|EAU54627.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1] Length = 357 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 123/348 (35%), Positives = 180/348 (51%), Gaps = 20/348 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLIL 72 DN + R + DP + + L RE ++ + ++Q +L DNL L Sbjct: 5 LDNILHRREEIAVMLADPDVTSDNKRYTALSREFSEIEPVAEEAQHYLDLQQQLADNLEL 64 Query: 73 LELALEEDDCSI-LQETSDNLQR-IKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAG 126 + + DC L+E ++ R IK + S+L D ND LE+ AG G Sbjct: 65 IA----DPDCDAELKEMAEAEAREIKQAISASDAALSMLLLPKDPNDNRDVILEIRAGTG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+R+AE + +K E L D G K I G + K E G Sbjct: 121 GDEAALFAADLFRMYSRYAETQGYKVEILSASDTGIGGYKEIIAQISGNGVFSRFKFESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS ++ + PV ++ ++I I D RID YRASGAGGQHVN T Sbjct: 181 AHRVQRVPETESGGRIHTSACTVAILPVAEE-VDINIRPEDLRIDVYRASGAGGQHVNKT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITHIP+G+VV CQ + SQHKNKAQA +L+A+L++ E + E A ++ K + Sbjct: 240 ESAVRITHIPSGLVVTCQDQASQHKNKAQAMKVLQARLFDKE--QSELDAERSQARKGMV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G G +IR+Y P + D R + +L GD+ + + A + Sbjct: 298 GSGDRSERIRTYNY-PQGRITDHRIGLTLYKLEQILGGDMGELLDALI 344 >gi|253574239|ref|ZP_04851581.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786 str. D14] gi|251846716|gb|EES74722.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786 str. D14] Length = 355 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 94/240 (39%), Positives = 148/240 (61%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L RMYTR+A+ + ++ E +++++ + G K +I Sbjct: 106 DDKNVIVEIRGAAGGDEAALFAADLYRMYTRYADSQGWRVEVMDMNESDLGGFKEVIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ RI +S R HTS S++ V P V++ ++IEI + D R+DT Sbjct: 166 NGKGAYSKLKYESGAHRVQRIPATESGGRIHTSTSTVAVLPEVEE-VDIEILDKDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+THIPTG+V CQ +SQ+ NK +A +LRA++Y +++++ Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIY--DMKRQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE A K+++G G +IR+Y P V D R + V++G+L++ + A Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDQVMNGELEEIVSA 341 >gi|317473032|ref|ZP_07932332.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA] gi|316899461|gb|EFV21475.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA] Length = 357 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 129/359 (35%), Positives = 197/359 (54%), Gaps = 34/359 (9%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDR----- 65 +FD ++ V+RL + + DP + + + LM+E+ L + KE +Q++ Sbjct: 1 MFDKLESLVERLDTVLQQLNDPDVAGDQNRFRDLMKEQSDLAPIVEKYKEYVQEKQNIEE 60 Query: 66 ------LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--- 116 + + ELA EE L E+ N++R++ E++ +L D ND Sbjct: 61 SLELLEEESDEEMKELAKEE-----LSESKANVERLEEELK------ILLIPKDPNDDKN 109 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGAGG E+ +A + RMY +AE R++K E L ++ G K +I G Sbjct: 110 IIVEIRAGAGGDEAALFAADVARMYRSYAEGRRWKVETLSFNESGIGGFKELVFMISGQG 169 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 AY K E GVHR+ RI +S R HTS ++ + P V+ +E+E+ +DC+ D +RAS Sbjct: 170 AYSRFKYESGVHRVQRIPATESGGRIHTSTITVAIMPEVE-DVEVEVDLNDCKFDVFRAS 228 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ KNK +A +LR++LYELE QK + Sbjct: 229 GNGGQCVNTTDSAVRLTHLPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDAE 288 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E K+++G G +IR+Y P V D R + V++GDLD+ + + A Sbjct: 289 --AEKRKSQVGTGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTA 344 >gi|116515052|ref|YP_802681.1| hypothetical protein BCc_111 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285552|sp|Q057W1|RF1_BUCCC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116256906|gb|ABJ90588.1| peptide chain release factor 1 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 357 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/242 (40%), Positives = 148/242 (61%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D N ++E+ A GG E+ ++ L +MY ++A+ + +K + + +H+GE+ G K L + Sbjct: 107 DKNSCFIEIRAATGGHEAAIFSGDLCKMYMKYADFKSWKVDIINMHEGEKGGYKEIILKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A G LK E G HR+ R+ +S R HTS ++ + P V S I ++ SD +IDT Sbjct: 167 IGIGACGRLKFESGGHRVQRVPQTESQGRVHTSACTVAIMPEVPKSKRIILNTSDLKIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVNTTDSAVRITH+PTG VV+CQ ERSQHKNK +A ++L AK+Y ++ Sbjct: 227 FRSSGAGGQHVNTTDSAVRITHLPTGCVVECQDERSQHKNKEKALSVLSAKIYS-KMNAE 285 Query: 293 EEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +++ N K+ +G G + R+Y + V D R N+ ++VL G LD ++ Sbjct: 286 KKLKN-SLMRKSLLGTGERSDRNRTYNFSQNR-VTDHRINLTIYRLNEVLLGKLDLLIEP 343 Query: 350 TL 351 L Sbjct: 344 LL 345 >gi|85375680|ref|YP_459742.1| peptide chain release factor 1 [Erythrobacter litoralis HTCC2594] gi|122543160|sp|Q2N5U6|RF1_ERYLH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|84788763|gb|ABC64945.1| protein chain release factor A [Erythrobacter litoralis HTCC2594] Length = 355 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 138/224 (61%), Gaps = 11/224 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ AG GG E+ +A L RMY R+A ++ +K E + ++ E G K Sbjct: 103 ADNKPAMLEIRAGTGGDEAALFAGDLYRMYERFAGEQGWKVEPVSMNASEVGGFKEIVAN 162 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +S R HTS +++ V P D+ ++++I + D +ID Sbjct: 163 VSGTGVFAKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEPDE-VDVQIDDKDLKID 221 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LEL 289 YRASGAGGQHVNTTDSAVRITH+PTG+VVQ Q ERSQHKNKA+A +LR +LY+ E Sbjct: 222 IYRASGAGGQHVNTTDSAVRITHLPTGIVVQQQDERSQHKNKAKAMQVLRTRLYDHLREQ 281 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 + EE A + K +G G +IR+Y P V D R + Sbjct: 282 SQGEEAA----ARKAMVGSGDRSERIRTYNF-PQGRVTDHRIGL 320 >gi|319787948|ref|YP_004147423.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1] gi|317466460|gb|ADV28192.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1] Length = 360 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/239 (41%), Positives = 145/239 (60%), Gaps = 7/239 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMY R+AE++ +K E + GE G K I Sbjct: 107 DEGNLFLEVRAGTGGDEAALFAGDLFRMYARYAERQGWKVEVESDNPGEHGGHKEIVARI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ + P D+ EI I+ +D ++DT Sbjct: 167 VGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAATVAIIPEADEIEEITINPADLKVDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN TDSA+RITH+P+G+VV+ Q ERSQH N+ +A L+A+L + E K+ Sbjct: 227 FRSSGAGGQHVNKTDSAIRITHLPSGLVVESQTERSQHANRDKAMKRLKAQLLDAERSKQ 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347 + A ES + ++G G ++IR+Y P + D R + ++L+GDLD + Sbjct: 287 Q--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRVEGLTLYDLPNILEGDLDPLV 342 >gi|313113834|ref|ZP_07799401.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii KLE1255] gi|310623861|gb|EFQ07249.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii KLE1255] Length = 363 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 119/345 (34%), Positives = 189/345 (54%), Gaps = 17/345 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72 D R L+ + P + + LMRE + + + QD L L Sbjct: 8 MDAVCHRFEELSIRLNQPDTAADPALFRRLMREYHDAEPVVQAYRAWQTAQDHLAQAKAL 67 Query: 73 LEL--ALEEDDCSILQ-ETSDNLQRI-KLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 LE AL+ D ++Q E S+ Q + KLE K LL + D + +E+ GAGG Sbjct: 68 LEEPGALDPDFKQMIQQEISEKSQDVEKLENNLKIL--LLPKDVNDGKNVIVEIRGGAGG 125 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A+ LLRMYT + + R ++ E L +++ E G+K A + G AY LK E GV Sbjct: 126 EEAALFAHSLLRMYTMYVQSRGWQLEMLNLNETELGGVKEAIFSVDGAGAYNRLKYESGV 185 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P ++ ++ + D RIDT+R+SGAGGQH+N T Sbjct: 186 HRVQRVPETETQGRIHTSTATVAVMPQAEE-VDFALDMKDLRIDTFRSSGAGGQHINKTS 244 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+R+TH+PTG+VV+CQ ERSQ +NK +A +LR++L L +++++ I S + ++G Sbjct: 245 SAIRVTHLPTGMVVECQNERSQFQNKDKALEILRSRL--LAQKQKQQQDAINASRQGQVG 302 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P D R + + S ++DG+LD+ + A Sbjct: 303 TGDRSEKIRTYNF-PQDRCTDHRIGLTVHNLSKIMDGNLDEVIDA 346 >gi|227832889|ref|YP_002834596.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC 700975] gi|262182622|ref|ZP_06042043.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC 700975] gi|254790875|sp|C3PFQ4|RF1_CORA7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|227453905|gb|ACP32658.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC 700975] Length = 358 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 118/346 (34%), Positives = 189/346 (54%), Gaps = 17/346 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ + + + DP + + + + L + L ++ +E+ D E+A Sbjct: 9 DDIISEYQGIEMQMADPEVAGDQSQFRKLSKRYAELRPIVAVNEELVQARQDLADAKEMA 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQDWA 134 E+ + Q D L+ + +++E +Q LL+ E DS D +E+ AGAGG E+ +A Sbjct: 69 YEDHE---FQSEVDRLEPLVVQLE-EQLADLLAPRDEHDSEDIIMEIKAGAGGEEAALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-----NAYGWLKGEQGVHR 189 L RMY R+A+K F+ E L +++ + G+K ++ K A+ K E GVHR Sbjct: 125 GDLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEGGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R TS + + VYP ++ + I + D R+D YR+SG GGQ VNTTDSA Sbjct: 185 VQRVPVTESQGRIQTSAAGVLVYPEPEEIDSVNIDDKDIRVDVYRSSGKGGQGVNTTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--- 306 VRITH+PTG+VV CQ+ERSQ +NKA+A +L+A+L ++E + RE A GE +++ Sbjct: 245 VRITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQMEREARE--AEAGEQRASQVRTM 302 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R + + VLDGD+ D ++A A Sbjct: 303 DRSERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMQDLIEALQA 347 >gi|30023360|ref|NP_834991.1| peptide chain release factor 1 [Bacillus cereus ATCC 14579] gi|206970257|ref|ZP_03231210.1| peptide chain release factor 1 [Bacillus cereus AH1134] gi|218236058|ref|YP_002370106.1| peptide chain release factor 1 [Bacillus cereus B4264] gi|228924065|ref|ZP_04087341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228955577|ref|ZP_04117579.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228961593|ref|ZP_04123202.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051000|ref|ZP_04194549.1| Peptide chain release factor 1 [Bacillus cereus AH676] gi|229072796|ref|ZP_04205995.1| Peptide chain release factor 1 [Bacillus cereus F65185] gi|229082544|ref|ZP_04215007.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2] gi|229112743|ref|ZP_04242276.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15] gi|229130579|ref|ZP_04259535.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4] gi|229147870|ref|ZP_04276211.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24] gi|229153493|ref|ZP_04281671.1| Peptide chain release factor 1 [Bacillus cereus m1550] gi|229181577|ref|ZP_04308903.1| Peptide chain release factor 1 [Bacillus cereus 172560W] gi|229193581|ref|ZP_04320525.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876] gi|29898921|gb|AAP12192.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus cereus ATCC 14579] gi|206734834|gb|EDZ52003.1| peptide chain release factor 1 [Bacillus cereus AH1134] gi|218164015|gb|ACK64007.1| peptide chain release factor 1 [Bacillus cereus B4264] gi|228589886|gb|EEK47761.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876] gi|228601945|gb|EEK59440.1| Peptide chain release factor 1 [Bacillus cereus 172560W] gi|228630097|gb|EEK86748.1| Peptide chain release factor 1 [Bacillus cereus m1550] gi|228635520|gb|EEK92009.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24] gi|228652918|gb|EEL08800.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4] gi|228670724|gb|EEL26035.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15] gi|228700976|gb|EEL53499.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2] gi|228710287|gb|EEL62262.1| Peptide chain release factor 1 [Bacillus cereus F65185] gi|228722377|gb|EEL73773.1| Peptide chain release factor 1 [Bacillus cereus AH676] gi|228798075|gb|EEM45079.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804105|gb|EEM50722.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228835555|gb|EEM80920.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 358 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 121/348 (34%), Positives = 185/348 (53%), Gaps = 12/348 (3%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D AV+ R LN DP + + + + +E+ + + +E +D + Sbjct: 1 MNDVLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L D +LE L+ + +++E L+ + K E + + D + +EV Sbjct: 61 LKDAKAMLEDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGA 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E Sbjct: 121 AGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ VN Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDTFASSGPGGQSVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQ 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 344 >gi|224437763|ref|ZP_03658710.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818] gi|313144209|ref|ZP_07806402.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818] gi|313129240|gb|EFR46857.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818] Length = 354 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 100/236 (42%), Positives = 142/236 (60%), Gaps = 7/236 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 104 DSKNIYLEIRAGTGGDEAGIFVGDLFKAYCRYADLQKWKVEIISSSENNVGGYKEVIALI 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG +Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +ID Sbjct: 164 KGQGSYSKLKYEGGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVNINPSDLKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+ G GGQ VNTTDSAVRITHIPTG+ V Q E+SQHKNK +A +L+A+LYE EL+ + Sbjct: 223 FRSGGHGGQSVNTTDSAVRITHIPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 A E+ KT++G G +IR+Y P + D R + S +++ G L D Sbjct: 283 N--AQNKEARKTQVGSGDRSERIRTYNY-PQNRLTDHRIGLTLYSLEEIMLGGLLD 335 >gi|194016506|ref|ZP_03055120.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061] gi|194011979|gb|EDW21547.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061] Length = 355 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 146/242 (60%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +EV AGG E+ +A L RMY+R+AE + +KTE +E + G K +I Sbjct: 106 DNKNVIVEVRGAAGGEEAALFAGNLYRMYSRYAEMQGWKTEVMEANVTGTGGYKEIIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT Sbjct: 166 SGKGAYSRLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ + Q R Sbjct: 225 FTSSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD-KFQ-R 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A ++ K+ +G G +IR+Y P V D R + +L+G LD+ + A Sbjct: 283 EAQAEYDQTRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|116333899|ref|YP_795426.1| peptide chain release factor 1 [Lactobacillus brevis ATCC 367] gi|122269414|sp|Q03QX7|RF1_LACBA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116099246|gb|ABJ64395.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus brevis ATCC 367] Length = 361 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 118/349 (33%), Positives = 187/349 (53%), Gaps = 16/349 (4%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +FD AV R LN DP + + L +E L + + QD ++ D Sbjct: 4 MFDKLQAVADRYDELNELISDPEVIADTQRFMALSKEEGELRETVDKYHQYQDVTQQIAD 63 Query: 69 NLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGA 125 + +L L+ D S++++ L Q+ LE + K LL + D + +E+H A Sbjct: 64 DDEMLHDKLDADMESMIKDELKELTAQKAALEEDIKVL--LLPKDPNDDKNIIMEIHGAA 121 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L MY+++AE++ ++ E ++ + E G K ++I G Y LK E Sbjct: 122 GGDEASLFAADLFSMYSKYAERQGWQIEVVDENATEVGGFKEIVMMITGNKVYSKLKYEN 181 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ V P +D ++I+I D R D YR+SGAGGQH+N Sbjct: 182 GAHRVQRVPVTESAGRVHTSTATVGVMPEEED-VDIDIDPKDIRTDVYRSSGAGGQHINK 240 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+TH+PTG+VV Q ERSQ +N+A+A +LRA++Y+ Q+ E N K+ Sbjct: 241 TSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILRARVYDYYKQQEESAYNA--ERKSA 298 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R + +++G+LDD + A + Sbjct: 299 VGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDDIIDALI 346 >gi|251771816|gb|EES52391.1| peptide chain release factor 1 [Leptospirillum ferrodiazotrophum] Length = 362 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 107/286 (37%), Positives = 170/286 (59%), Gaps = 11/286 (3%) Query: 74 ELALEEDDCSILQETSDNLQRIK--LE-VEYKQFESLLSG-EADSNDAYLEVHAGAGGTE 129 EL L DD + + S +R++ LE E + +++L + D + ++E+ AGAGG E Sbjct: 70 ELDLIRDDPQMAELVSGEDRRLREVLEGTELRLVDAILPKDQRDERNLFIEIRAGAGGEE 129 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+ E++ F+ E +E ++ + G K + ++G NA+ LK E GVHR Sbjct: 130 AALFAAELGRMYLRFVERQGFRAEVMESNETDIGGSKEFIIYVQGRNAFSRLKYESGVHR 189 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS ++ + P + +E++I + D RIDT+ +SGAGGQ VNTT SA Sbjct: 190 VQRVPVTEAGGRIHTSTVTVAILPEASE-VEVDIEQKDLRIDTFCSSGAGGQSVNTTYSA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+G+VV CQ ERSQ KN+ +A ++LR++L E E+ ++ + I KT +G G Sbjct: 249 VRITHIPSGIVVSCQDERSQLKNRTKAMSVLRSRLLEQEVSRQNQ--EIASQRKTLVGSG 306 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R + V++G+L+ + A A Sbjct: 307 DRSERIRTYNF-PQNRVTDHRIGLTLYQLDRVMEGELEPLVDALRA 351 >gi|319441088|ref|ZP_07990244.1| peptide chain release factor 1 [Corynebacterium variabile DSM 44702] Length = 361 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 148/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS+D +EV +GAGG E+ +A L+RMY R+AEK F E L+ ++ + G+K T+ I Sbjct: 106 DSDDVVMEVKSGAGGEEAALFAGELVRMYQRYAEKHGFTCEVLDTNETDLGGVKDLTMSI 165 Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K P A+ K E GVHR+ RI +S R TS + + VYP D+ +++I + D Sbjct: 166 RSKQPTRDGAWSVFKFEGGVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDDKD 225 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +NKA+A +L A+L ++ Sbjct: 226 LRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNKARAMQVLAARLQQM 285 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + ++ + A G ++ + +IR+Y P V D R + + VLDGDL+ Sbjct: 286 KEEEADAAAAEGRHAQIRTMDRSERIRTYNF-PESRVSDHRIGYKANNLDAVLDGDLEAL 344 Query: 347 MKA 349 A Sbjct: 345 FGA 347 >gi|317153066|ref|YP_004121114.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2] gi|316943317|gb|ADU62368.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2] Length = 355 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/249 (39%), Positives = 145/249 (58%), Gaps = 7/249 (2%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S D + LE+ AG GG E+ +A L RMYTR+AE ++K E + + G+K Sbjct: 99 LPSDPMDEKNIILEIRAGTGGDEAGLFAADLYRMYTRYAEANRWKVEEMSSNVTGSGGLK 158 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 I G Y LK E G HR+ R+ +S R HTS ++ + P ++ ++I++ Sbjct: 159 EVIASIAGDKVYSKLKYESGTHRVQRVPATESQGRIHTSVVTVAIMPEAEE-VDIDLRPE 217 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+D +R+SG GGQ VNTTDSA+R+THIPTG++V CQ E+SQHKNKA+A +LR++L + Sbjct: 218 DVRVDVFRSSGPGGQSVNTTDSAIRVTHIPTGMIVICQDEKSQHKNKAKALKVLRSRLLQ 277 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 LE K + A + + ++G G +IR+Y P V D R N+ +L+G+L Sbjct: 278 LEQDKAK--AEEDAARRIQVGSGDRSERIRTYNF-PQGRVSDHRINLTLHKLPQILEGEL 334 Query: 344 DDFMKATLA 352 DD A + Sbjct: 335 DDLTDALIG 343 >gi|47558934|gb|AAT35567.1| protein release factor 1 [Chlamydia trachomatis] Length = 359 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 118/338 (34%), Positives = 186/338 (55%), Gaps = 21/338 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76 ++RL + + DP+++ N E L +E L NA + + L D+ + L Sbjct: 9 LKRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTE 68 Query: 77 LEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTES 130 + + ++L+E + ++R+ KQ E+LL +D +E+ AG GG E+ Sbjct: 69 KDPEIVAMLEEGVLVGEEAVERLS-----KQLENLLIPPDPDDDLSVIMELRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + +RMY +A + ++ E L + + G K + I G + +L+ E G HR+ Sbjct: 124 ALFVGDCVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 R+ ++ R HTS ++ V P +D E+ I E D RIDT+R+SGAGGQHVN TDSA Sbjct: 184 QRVPETETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+GVVV CQ ERSQHKNKA+A +L+A++ + E+QKR + A+ S+ ++G G Sbjct: 244 VRITHIPSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRSA--QVGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +IR+Y P V D R + + V++G+LD Sbjct: 302 DRSERIRTYNF-PQNRVTDHRIALTLYNLDRVMEGELD 338 >gi|167745421|ref|ZP_02417548.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662] gi|167655142|gb|EDR99271.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662] Length = 357 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 110/274 (40%), Positives = 161/274 (58%), Gaps = 16/274 (5%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMY 141 L E+ N++R++ E++ +L D ND +E+ AGAGG E+ +A + RMY Sbjct: 81 LSESKANVERLEEELK------ILLIPKDPNDDKNIIVEIRAGAGGDEAALFAADVARMY 134 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 +AE R++K E L ++ G K +I G AY K E GVHR+ RI +S R Sbjct: 135 RSYAEGRRWKVETLSFNESGIGGFKELVFMISGQGAYSRFKYESGVHRVQRIPATESGGR 194 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS ++ + P V+ +E+E+ +DC+ D +RASG GGQ VNTTDSAVR+TH+PTG+VV Sbjct: 195 IHTSTITVAIMPEVE-DVEVEVDLNDCKFDVFRASGNGGQCVNTTDSAVRLTHLPTGIVV 253 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 CQ E+SQ KNK +A +LR++LYELE QK + E K+++G G +IR+Y Sbjct: 254 SCQDEKSQLKNKDKALKVLRSRLYELEQQKAHDAE--AEKRKSQVGTGDRSEKIRTYNY- 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R + V++GDLD+ + + A Sbjct: 311 PQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTA 344 >gi|152991659|ref|YP_001357380.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1] gi|166223612|sp|A6Q6B4|RF1_SULNB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151423520|dbj|BAF71023.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1] Length = 355 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/231 (41%), Positives = 141/231 (61%), Gaps = 7/231 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AGAGG ES + + RMY+R+AE+ +K E + +DG G K I Sbjct: 104 DDKNIFLELRAGAGGDESALFVADVFRMYSRYAEQMGWKVEIVSTNDGTAGGYKELIAEI 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ ++ R HTS ++ V P VDD +E++I ++ ++D Sbjct: 164 KGQGVYSQLKYEAGTHRVQRVPDTETQGRVHTSAITVAVIPEVDD-VEVDIKPNEVKMDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVR+THIPTG+VV Q E+SQHKN+ +A +L+A++YE ELQK Sbjct: 223 YRSSGCGGQSVNTTDSAVRLTHIPTGIVVAIQDEKSQHKNRDKAMKVLKARVYESELQK- 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++ K ++G G +IR+Y P + D R + + DV++ Sbjct: 282 -QLDETAGQRKLQVGSGDRSEKIRTYNY-PQNRLTDHRIGLTLYALDDVMN 330 >gi|313885157|ref|ZP_07818909.1| peptide chain release factor 1 [Eremococcus coleocola ACS-139-V-Col8] gi|312619848|gb|EFR31285.1| peptide chain release factor 1 [Eremococcus coleocola ACS-139-V-Col8] Length = 359 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 118/298 (39%), Positives = 167/298 (56%), Gaps = 16/298 (5%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSNDA- 117 KE++ + D +L EE D IL + L +K E E Q + LL D ND Sbjct: 52 KEVEAEIEDTEAMLS---EESDDDILAMAKEELASLKAENEQLQEDIKLLMLPEDPNDGK 108 Query: 118 --YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +E+ AGG E+Q +A LL MYT++A+K+ +KTE L+ + G K TL+I G Sbjct: 109 NIIMEIRGAAGGDEAQLFAGDLLNMYTKYADKQGWKTEVLDANITGIGGYKEVTLMITGN 168 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 Y LK E G HR+ R+ +S R HTS +++ V P ++ I+ E+ E+D R+D Y A Sbjct: 169 KVYSKLKFENGAHRVQRVPQTESQGRVHTSTATVVVMPEAEE-IDFELDENDIRVDIYHA 227 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T SAVR+THIPT VV Q ERSQ KN+ +A +LRA++Y+ Q R + Sbjct: 228 SGAGGQHVNKTASAVRLTHIPTNTVVAMQDERSQIKNREKAMKILRARVYD---QVRSQA 284 Query: 296 ANIGESS-KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +S K ++G G +IR+Y P V D R + VL G+LD+ + A Sbjct: 285 QSEYDSERKLKVGTGDRSERIRTYNF-PQSRVTDHRIGLTLQQLDSVLSGNLDEIIDA 341 >gi|300741300|ref|ZP_07071321.1| peptide chain release factor 1 [Rothia dentocariosa M567] gi|311113380|ref|YP_003984602.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931] gi|300380485|gb|EFJ77047.1| peptide chain release factor 1 [Rothia dentocariosa M567] gi|310944874|gb|ADP41168.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931] Length = 360 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 106/247 (42%), Positives = 148/247 (59%), Gaps = 10/247 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LEV AGAGG E+ +A LLRMY R+AE + +KTE + + G K A + I Sbjct: 100 DGRNVILEVKAGAGGDEAALFAGDLLRMYLRYAEHKGWKTEVISSTSTDVGGYKDAQIAI 159 Query: 173 KG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG P W +K E GVHR+ R+ +S R HTS + + V+P VD+ EIEIS++ Sbjct: 160 KGTSNEPAEGVWAHMKYEGGVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEIEISQN 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-- 284 D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ A +LRA+L Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAAMRVLRARLLA 279 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ E E A+ +T + +IR+Y P + D RT + + VLDGDLD Sbjct: 280 HQQEQIDAENAAHRASQVRT-MDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLDGDLD 337 Query: 345 DFMKATL 351 +++ + Sbjct: 338 PVVQSAI 344 >gi|296331340|ref|ZP_06873812.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676326|ref|YP_003867998.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii str. W23] gi|296151455|gb|EFG92332.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414570|gb|ADM39689.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii str. W23] Length = 356 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 114/339 (33%), Positives = 184/339 (54%), Gaps = 13/339 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELAL 77 +R LN DP + + + + +E+ + + ++ +D +L D +LE L Sbjct: 10 ERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLADAKAMLEEKL 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 + + +++E LQ+ + E ++ + LL D + +E+ AGG E+ +A Sbjct: 70 DAEMRDMVKEEISELQK-ETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE + +KTE +E G K +I G AY LK E G HR+ R+ Sbjct: 129 NLYRMYSRYAELQGWKTEVMEASVTGTGGYKEIIFMITGSGAYSKLKYENGAHRVQRVPE 188 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ P ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+ Sbjct: 189 TESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 247 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K+ +G G +I Sbjct: 248 PTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDQTRKSAVGSGDRSERI 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R + +L+G LD+ ++A + Sbjct: 306 RTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALI 343 >gi|254821298|ref|ZP_05226299.1| peptide chain release factor 1 [Mycobacterium intracellulare ATCC 13950] Length = 357 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 126/323 (39%), Positives = 176/323 (54%), Gaps = 11/323 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP L N EA+ R L + +++ D ELA DD S Sbjct: 18 LERRLADPELHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLEAARELAA--DDDSFA 75 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E SD R+ E++ + + L + D++D LEV +G GG ES +A L RMY R+ Sbjct: 76 AEASDLESRVA-ELDTQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIRY 134 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRISPYDSN 199 AE+ + L+ + G K ATL I KG +A G W +K E GVHR+ R+ +S Sbjct: 135 AERHGWTVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEGGVHRVQRVPVTESQ 194 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS + + VYP ++ E++I ESD RID YR+SG GGQ VNTTDSAVRITH+PTG+ Sbjct: 195 GRVHTSAAGVLVYPEPEEIGEVQIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGI 254 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318 VV CQ ERSQ +NKA+A +L A+L L ++ A+ +S+ + +IR+Y Sbjct: 255 VVTCQNERSQLQNKARALQVLAARLQSLAEEQALADASADRASQIRTVDRSERIRTYNF- 313 Query: 319 PYQMVKDLRTNIEKTSPSDVLDG 341 P + D R N + + VLDG Sbjct: 314 PENRIADHRINFKSHNLDQVLDG 336 >gi|330994789|ref|ZP_08318711.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1] gi|329758050|gb|EGG74572.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1] Length = 353 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 100/245 (40%), Positives = 143/245 (58%), Gaps = 13/245 (5%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD A LE+ AGG E+ +A L Y R+A+ R ++ E LE E G++ Sbjct: 101 EADERSAILEIRPAAGGDEAGLFAAELFGAYQRYADLRGWRFEVLEYDQSELGGLREGIA 160 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G + LK E GVHR+ R+ +S R HTS ++ V P ++ +++E++E D RI Sbjct: 161 SITGRGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEE-VDVEVNEGDLRI 219 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL--- 287 D YRASGAGGQHVN T+SAVRITH+PT +VV Q+E+SQHKN+A+A +LRA+LYE Sbjct: 220 DVYRASGAGGQHVNKTESAVRITHLPTNIVVAMQEEKSQHKNRAKAMKILRARLYERNRA 279 Query: 288 ---ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 E + + A +G ++E +IR+Y P V D R + V+ G+LD Sbjct: 280 AAHETRAADRRAQVGTGDRSE-----RIRTYNF-PQGRVTDHRIGLTLYKIDRVMAGELD 333 Query: 345 DFMKA 349 +F+ A Sbjct: 334 EFVDA 338 >gi|319788960|ref|YP_004090275.1| peptide chain release factor 1 [Ruminococcus albus 7] gi|315450827|gb|ADU24389.1| peptide chain release factor 1 [Ruminococcus albus 7] Length = 359 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/241 (38%), Positives = 149/241 (61%), Gaps = 8/241 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +AN L RMY+ +A ++ ++ E + ++ E G K T + Sbjct: 107 DDRNVIIEIRGGAGGEEAALFANSLYRMYSMYAAQKNWQIEVMSANETELGGYKEITFTV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-SDCRID 231 G AY LK E GVHR+ R+ +S R HTS ++ V P VDD +E+EI+E + +++ Sbjct: 167 SGQGAYSRLKYESGVHRVQRVPETESQGRVHTSTVTVAVLPEVDD-VELEINEEKEIKME 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +R+SGAGGQH+N T SAVR+ HIPTG VV+CQ ERSQ +N+ +A ML+AKL + +++ Sbjct: 226 VFRSSGAGGQHINKTSSAVRLIHIPTGTVVECQNERSQFQNREKALKMLKAKLLDEKVRA 285 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +E+ I + ++++G G +IR+Y P + D R + +L+G+LD+ + Sbjct: 286 QED--EIASNRRSQVGTGDRSEKIRTYNF-PESRISDHRIKLTLYKLEQILNGNLDEVID 342 Query: 349 A 349 A Sbjct: 343 A 343 >gi|65317305|ref|ZP_00390264.1| COG0216: Protein chain release factor A [Bacillus anthracis str. A2012] Length = 323 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 141/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +EV AGG E+ +A L RMY+R+AE + +KTE +E E G K +I Sbjct: 74 DDKNVIVEVRGAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMI 133 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A+ LK E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT Sbjct: 134 NGKGAFAKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDVRVDT 192 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q Sbjct: 193 FASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ-- 250 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A ++ K +G G +IR+Y P V D R + +L G LDDF+ A Sbjct: 251 EAQAEYDQNRKQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINA 309 >gi|52082235|ref|YP_081026.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580] gi|52787627|ref|YP_093456.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580] gi|319648109|ref|ZP_08002326.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2] gi|81608865|sp|Q65DV1|RF1_BACLD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52005446|gb|AAU25388.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580] gi|52350129|gb|AAU42763.1| PrfA [Bacillus licheniformis ATCC 14580] gi|317389744|gb|EFV70554.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2] Length = 356 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 116/338 (34%), Positives = 181/338 (53%), Gaps = 13/338 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALE 78 R LN DP + + + + +E+ L + + + ++L D +LE L+ Sbjct: 11 RYEKLNELLSDPEVVNDPKKLREYSKEQSDLQETVEVYRRYRSASEQLSDAKAMLEEKLD 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136 D +++E LQ ++E Q + LL D + +E+ AGG E+ +A Sbjct: 71 SDMREMVKEEISELQE-EIESLTDQLKVLLIPKDPNDDKNVIMEIRGAAGGEEAALFAGN 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY+R+AE + +KTE +E + G K +I G AY LK E G HR+ R+ Sbjct: 130 LYRMYSRYAELQGWKTEVMEANMTGTGGYKEIIFMINGNGAYSRLKYENGAHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ P ++ +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+P Sbjct: 190 ESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLP 248 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K+ +G G +IR Sbjct: 249 TGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDQNRKSAVGTGDRSERIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +Y P V D R + +L+G LD+ + A + Sbjct: 307 TYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALI 343 >gi|330813117|ref|YP_004357356.1| peptide chain release factor 1 [Candidatus Pelagibacter sp. IMCC9063] gi|327486212|gb|AEA80617.1| peptide chain release factor 1 [Candidatus Pelagibacter sp. IMCC9063] Length = 357 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 121/318 (38%), Positives = 176/318 (55%), Gaps = 16/318 (5%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETSDNLQRIK-LEVEY-KQ 103 +E + I IK D + D L ++ ++D D I + +L+ IK E EY K+ Sbjct: 36 KEYSSIGEIIETIKSYIDAIKDKEDLKKILSDKDSDIEIREMAEHDLEEIKSKEQEYEKK 95 Query: 104 FESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + L EAD +A +E+ AG GG E+ +A+ L MY + + ++ E L + E Sbjct: 96 VKVFLLPKDEADEKNAIVEIRAGTGGLEASLFASDLFNMYQKVSSINGWRVEVLSVSASE 155 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K I G N + LK E GVHR+ R+ ++ R HTS +++ V ++ +++ Sbjct: 156 AGGYKEIVFTITGKNVFSKLKFESGVHRVQRVPDTETQGRVHTSAATVAVLAEAEE-VDV 214 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 +I E+D RID +R+ G GGQ VNTTDSAVRITHIPTGVVV Q E+SQHKNKA+A +LR Sbjct: 215 KIDENDLRIDVFRSGGPGGQSVNTTDSAVRITHIPTGVVVAIQDEKSQHKNKAKAMTILR 274 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 ++LYE E + E ++ + K++IG G +IR+Y P V D R N+ + Sbjct: 275 SRLYEAERLRLENERSV--ARKSQIGTGDRSERIRTYNF-PQGRVSDHRINLTLHKLTGF 331 Query: 339 LDGDLDDF--MKATLAIK 354 L G DDF M L IK Sbjct: 332 LAG--DDFAEMSDALQIK 347 >gi|259418822|ref|ZP_05742739.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B] gi|259345044|gb|EEW56898.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B] Length = 444 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 114/315 (36%), Positives = 172/315 (54%), Gaps = 15/315 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-Q 103 L +E L I+ + L D E+ + D ++ +E L+ E E+ Q Sbjct: 126 LAKEYSDLRPVAEQIRAYRQLLSDLAEAEEMLADPDMKALAEEEIPTLKAALPEAEHALQ 185 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 L EADS A LE+ G GG E+ +A L RMY+R+AE + +K + +E E Sbjct: 186 LALLPKDEADSRAAILEIRPGTGGDEAALFAGDLYRMYSRYAEAQGWKIDVIEEQVSELG 245 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G+K I G + LK E GVHR+ R+ +S R HTS +++ V P +D ++I+I Sbjct: 246 GLKELVARINGDGVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAED-VDIKI 304 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+ + Sbjct: 305 DANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKTR 363 Query: 284 LYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LY+LE Q+ + + +G ++E +IR+Y P + D R N+ Sbjct: 364 LYDLERQRIDSERSADRASQVGSGDRSE-----RIRTYNF-PQGRMSDHRINLTLYKLEQ 417 Query: 338 VLDGDLDDFMKATLA 352 ++ GDLD+ + A ++ Sbjct: 418 IMGGDLDEIIDALIS 432 >gi|254796771|ref|YP_003081607.1| peptide chain release factor 1 [Neorickettsia risticii str. Illinois] gi|254590013|gb|ACT69375.1| peptide chain release factor 1 [Neorickettsia risticii str. Illinois] Length = 367 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 105/261 (40%), Positives = 161/261 (61%), Gaps = 11/261 (4%) Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 KLE E ++ L + D+ + LEV AG GG E+ +A L MY ++AE+ K++ E + Sbjct: 93 KLEFEIRRM-LLPKDKDDALNVMLEVRAGTGGDEAALFAASLFHMYQKYAERMKWRFEII 151 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 I E G K A I G + LK E GVHR+ R+ +S R HTS +++ V P Sbjct: 152 SISHNEIGGYKEANASISGSEVFAKLKFESGVHRVQRVPETESAGRIHTSTATVAVLPEP 211 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 +D ++++I++ D RID YR+SG GGQ VNTTDSAVR+THIPTG+VV Q E+SQHKN+A+ Sbjct: 212 ED-VDVKINDKDLRIDVYRSSGPGGQSVNTTDSAVRVTHIPTGIVVIQQDEKSQHKNRAK 270 Query: 276 AWNMLRAKLYELELQK-REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 A +L+ +LYE+E K ++EI+++ K++IG G + R+Y P + D R N+ Sbjct: 271 AMKVLKVRLYEIERNKVQQEISSM---RKSQIGSGERSEKTRTYNF-PQGRITDHRINLT 326 Query: 332 KTSPSD-VLDGDLDDFMKATL 351 ++ V +G+L+ ++A + Sbjct: 327 TYRINETVKEGELEPIIEALI 347 >gi|332701398|ref|ZP_08421486.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis Bay] gi|332551547|gb|EGJ48591.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis Bay] Length = 357 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 144/242 (59%), Gaps = 11/242 (4%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 D LE+ AG GG E+ +A L RMY R+AE+ +K E L H+ G K I G Sbjct: 107 KDVILEIRAGTGGEEASLFAADLFRMYMRYAERVGWKVEMLSEHESATGGFKEVIASISG 166 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 Y LK E G+HR+ R+ ++ R HTS ++ V P ++ ++++I ++ RID YR Sbjct: 167 ERVYSRLKYESGIHRVQRVPATETQGRIHTSAVTVAVLPEAEE-VDLDIDPTELRIDVYR 225 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKR 292 ASGAGGQHVN T+SAVRITH+PT VV CQ E+SQHKNKA+A +LR+++ + +K Sbjct: 226 ASGAGGQHVNKTESAVRITHLPTNTVVTCQDEKSQHKNKAKAMKVLRSRILQSMQAARKD 285 Query: 293 EEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE A + + +G G +IR+Y P + D R N+ S S V++G LDD ++A Sbjct: 286 EEDA----ARRLLVGSGDRSGRIRTYNF-PQGRITDHRINLTLYSLSAVMEGALDDLVEA 340 Query: 350 TL 351 + Sbjct: 341 LI 342 >gi|297828437|ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata] gi|297327940|gb|EFH58360.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata] Length = 410 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 8/245 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD D LEV AG GG E+ +A + RMY R+++K+ +K + ++I + + G K A+ Sbjct: 155 EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKAWKFDIVDITESDMKGYKEASA 214 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G + YG LK E G+HR+ RI + + R HTS S+ + P D+ +++++ D RI Sbjct: 215 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADE-VDVQLRNEDLRI 273 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYR+ G+GGQH NTT+SAVRI H+PTG++V Q ERSQH N+A+A +L A+LYE+E Sbjct: 274 DTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERL 333 Query: 291 KREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346 + + ++ + +IG G +IR+Y P V D R I + D++ G+ LD F Sbjct: 334 RIQ--SSRSKLRSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITLHAIEDMMQGEILDSF 390 Query: 347 MKATL 351 + A L Sbjct: 391 IDALL 395 >gi|86140561|ref|ZP_01059120.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217] gi|85832503|gb|EAQ50952.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217] Length = 360 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/232 (40%), Positives = 145/232 (62%), Gaps = 3/232 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +E+ AG GG E+ +A L RMY ++ E + ++T ++ +G G K + + Sbjct: 108 DAKNAVMEIRAGTGGDEASIFAGDLYRMYMKYCESKGWRTSTIDYSEGTSGGYKEIQVEV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG L+ E GVHR+ R+ ++ R HTS +++ V+P ++ ++EI D RID Sbjct: 168 TGEDVYGTLRFEAGVHRVQRVPQTETQGRVHTSAATVMVFPEAEE-FDVEIDPKDVRIDY 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QK 291 + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL +K Sbjct: 227 FCSSGPGGQSVNTTYSAVRLTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKK 286 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +EE A S T +IR+Y P V D R N+ ++++DGD+ Sbjct: 287 QEEDAAKRGSMVTSGDRSAKIRTYNY-PQGRVTDHRINLTLYDLANIIDGDI 337 >gi|317130773|ref|YP_004097055.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522] gi|315475721|gb|ADU32324.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522] Length = 357 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 118/348 (33%), Positives = 191/348 (54%), Gaps = 13/348 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD AV+ R LN DP + + + + +E+ ++ + KEI+ + D Sbjct: 1 MFDRLEAVEERYERLNELLMDPDVISDTKKLRDYSKEQSDIEETVQTFREYKEIKKQYTD 60 Query: 69 NLILL-ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126 +L E L+++ +++ D L+ +E K LL + D + +E+ AG Sbjct: 61 AKTMLKEEDLDDEMYEMVKMEMDELEDQIPPLEEKLRVLLLPKDPNDDKNVIVEIRGAAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+R+AE + ++ E +E + + G K +I G AY +K E G Sbjct: 121 GDEAALFAGDLYRMYSRYAEAQGWRPEVIEASENDIGGYKEIIFMINGKGAYSKMKYENG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P ++ +E++I+E D R+DT+ +SG GGQ VNTT Sbjct: 181 AHRVQRVPTTESGGRIHTSTATVAVLPEAEE-VEVDINEKDIRVDTFASSGPGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+THIPTGVVV CQ E+SQ KNK +A +LRA++Y+ + +K E A ++ K+ + Sbjct: 240 MSAVRLTHIPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD-KFRKEAE-AEYAQNRKSAV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G G +IR+Y P V D R + +L+G LD+ A + Sbjct: 298 GTGDRSERIRTYNF-PQSRVTDHRIGLTLQKLDQILEGKLDEITDALI 344 >gi|146300064|ref|YP_001194655.1| peptide chain release factor 1 [Flavobacterium johnsoniae UW101] gi|189039972|sp|A5FHI8|RF1_FLAJO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146154482|gb|ABQ05336.1| bacterial peptide chain release factor 1 (bRF-1) [Flavobacterium johnsoniae UW101] Length = 358 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/260 (36%), Positives = 154/260 (59%), Gaps = 6/260 (2%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 L E D L ++ E+ +F + D+ + +E+ AG GG E+ +A L RMYT++ Sbjct: 81 LDEAKDRLPELEEEI---KFMLIPKDPEDAKNVMVEIRAGTGGDEASIFAGDLFRMYTKY 137 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 E ++T +++++G G K + G + YG LK E GVHR+ R+ ++ R HT Sbjct: 138 CETMGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAGVHRVQRVPQTETQGRVHT 197 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S +++ V P ++ ++++ +D R+D + +SG GGQ VNTT SAVR+THIPTG+V QCQ Sbjct: 198 SAATVMVLPEAEE-FDVQVDMNDVRVDFFCSSGPGGQSVNTTKSAVRLTHIPTGLVAQCQ 256 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMV 323 E+SQHKNK +A +LR++LYE+EL K++E SS+ G +IR+Y + V Sbjct: 257 DEKSQHKNKDKALMVLRSRLYEMELAKKQEEDAKKRSSQVSSGDRSAKIRTYNYAQGR-V 315 Query: 324 KDLRTNIEKTSPSDVLDGDL 343 D R + ++++GD+ Sbjct: 316 TDHRVGLTLYDLGNIMNGDI 335 >gi|319951972|ref|YP_004163239.1| bacterial peptide chain release factor 1 (brf-1) [Cellulophaga algicola DSM 14237] gi|319420632|gb|ADV47741.1| bacterial peptide chain release factor 1 (bRF-1) [Cellulophaga algicola DSM 14237] Length = 372 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 92/232 (39%), Positives = 142/232 (61%), Gaps = 3/232 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +EV AG GG E+ +A L RMYT++ E + +KT +++ +G G K + Sbjct: 120 DSKNVVVEVRAGTGGDEASIFAGDLFRMYTKYCESKGWKTNVIDLSEGTSGGYKEIQFEV 179 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +++ V P +D +++I D RID Sbjct: 180 TGDNVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAED-FDVQIEPKDVRIDF 238 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+THIP+G+V QCQ ++SQHKNK +A+ +LR++LY+ EL K+ Sbjct: 239 FCSSGPGGQSVNTTYSAVRLTHIPSGLVAQCQDQKSQHKNKEKAFKVLRSRLYDQELAKK 298 Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +E +S+ G +IR+Y + V D R + ++++GD+ Sbjct: 299 QEEDAAKRNSQVSSGDRSAKIRTYNYSQGR-VTDHRIGLTLYDLQNIMNGDI 349 >gi|168830308|gb|ACA34405.1| PrfA [uncultured bacterium pTW2] Length = 360 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 142/240 (59%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLEV AG GG E+ +A L RMY R+AE++ +K E GE G K + Sbjct: 107 DDGNLYLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWKLEVESASVGEHGGYKEIVARV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E G HR+ R+ +S R HTS +++ + + IEI+ +D RIDT Sbjct: 167 EGRGAYSKLKFESGTHRVQRVPDTESQGRIHTSAATVAIIAEDSSDVAIEINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN TDSA+RITH+P+GVVV+ Q ERSQH N+ +A LRA L E E +R Sbjct: 227 FRSSGAGGQHVNKTDSAIRITHLPSGVVVENQTERSQHANRDKAMKRLRAMLVEAETSRR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMK 348 E A + K ++G G ++IR+Y P + D R + +VL+G+LD ++ Sbjct: 287 E--AAQAQDRKLQVGSGDRSQRIRTYNY-PQGRITDHRVEGLTLYDLPNVLEGNLDALIE 343 >gi|166710803|ref|ZP_02242010.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 361 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 114/322 (35%), Positives = 175/322 (54%), Gaps = 10/322 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + N + + L RE L+ ++ E + R +L E + + L E Sbjct: 25 DPDVVNNNDKFRTLSRELSQLE-PVAVALEDEARAKADLSAAEAMRTDPEMRELAEEEIA 83 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +LE Q SLL +D +LEV AG GG E+ +A L RMY R+AE++ Sbjct: 84 AAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQG 143 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E GE G K + G AY LK E G HR+ R+ +S R HTS +++ Sbjct: 144 WKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVPATESQGRIHTSAATV 203 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQ Sbjct: 204 AIIAEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQ 263 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326 H N+ +A L+A+L L+ ++ + A ++ K ++G G ++IR+Y P + D Sbjct: 264 HANRDKAMKRLKAQL--LDTERSKAAAAQAQTRKLQVGSGDRSQRIRTYSF-PQGRITDH 320 Query: 327 RT-NIEKTSPSDVLDGDLDDFM 347 R + ++++GDLD + Sbjct: 321 RVEGLTLYDLPNIIEGDLDALI 342 >gi|269219853|ref|ZP_06163707.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str. F0332] gi|269210758|gb|EEZ77098.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str. F0332] Length = 365 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 103/240 (42%), Positives = 145/240 (60%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ DA +EV AG GG ES +A LLRMY R+AE+ ++T+ L E G K L + Sbjct: 107 DARDAIVEVKAGEGGEESALFAGDLLRMYERYAERMGWQTQILSSVPTELGGFKDVQLAV 166 Query: 173 KGPNA--------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 + +A + LK E GVHR+ R+ +S R HTS + + V+ VDD E+EI+ Sbjct: 167 RLRSAPEDPADGVWAHLKFEAGVHRVQRVPVTESQGRLHTSAAGVLVFAEVDDPGEVEIA 226 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ++D R+D +R+SG GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ KN+ A +LRA+L Sbjct: 227 DADIRVDVFRSSGPGGQSVNTTDSAVRITHIPTGLVVSCQDEKSQIKNREAAMRVLRARL 286 Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +++L Q+ EE A + S + +IR+Y P + D RT + + VL G+L Sbjct: 287 RQMQLEQQAEENAAMRRSQVRTVDRSERIRTYNF-PENRISDHRTGYKAYNLDQVLAGNL 345 >gi|157694096|ref|YP_001488558.1| peptide chain release factor 1 [Bacillus pumilus SAFR-032] gi|166977360|sp|A8FID1|RF1_BACP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157682854|gb|ABV63998.1| peptide chain release factor RF1 [Bacillus pumilus SAFR-032] Length = 355 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 145/242 (59%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +EV AGG E+ +A L RMY+R+AE + +KTE +E G K +I Sbjct: 106 DNKNVIVEVRGAAGGEEAALFAGNLYRMYSRYAEMQGWKTEVMEASVTGTGGYKEIIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT Sbjct: 166 SGKGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ + Q R Sbjct: 225 FTSSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYD-KFQ-R 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A ++ K+ +G G +IR+Y P V D R + +L+G LD+ + A Sbjct: 283 EAQAEYDQTRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|313801610|gb|EFS42850.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA2] Length = 361 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 121/347 (34%), Positives = 186/347 (53%), Gaps = 28/347 (8%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D +RL + T+ D + + L R L + +S + D+L ++ E Sbjct: 10 DEVRRRLREIETQLADSAVLSDPSAMGRLGRRHARLRHVVSVADRV-DQLRADVEAAEDL 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 EED L+ ++ L R +L++ + LL S D DA +E+H+G GG ES +A Sbjct: 69 TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191 LLRMYTR+AE+ + L + G ++ + + G P+ AYG+LK E GVHR+ Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302 +TH+PTG+V CQ ERSQ +NKA+A MLRAK+ E + +R+++ + S+ Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +R+Y P + D R + +L GDL D + A Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342 >gi|315497942|ref|YP_004086746.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48] gi|315415954|gb|ADU12595.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48] Length = 358 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 120/343 (34%), Positives = 182/343 (53%), Gaps = 14/343 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + + E +++ L +E L + + + L EL Sbjct: 9 LDQVVDRFRMIEARMESATDGTEIVK---LSKEHAELKPVVDAVTALLKARASGPELEEL 65 Query: 76 -ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQD 132 AL + + S L QE L+ E+E L + D N A LEV AG GG E+ Sbjct: 66 IALNDPELSPLAQEEFQELKERLPELERGVALLLAPKDKDENASAILEVRAGTGGDEAAL 125 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+A + ++ E I +G+ G K + G +G LK E GVHR+ R Sbjct: 126 FAGDLFRMYSRYAASQGWRVEIDSISEGDAGGYKEIIASVTGDGVFGKLKFESGVHRVQR 185 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P +D +EI+I + D RIDTYRASG+GGQHVN TDSAVRI Sbjct: 186 VPATEAGGRIHTSAATVAVLPEAED-VEIDIQDKDIRIDTYRASGSGGQHVNKTDSAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+V E+SQH N+ A L+A+LY+++ Q + A ++ K+++G G Sbjct: 245 THLPTGIVA-TSSEKSQHMNRQIAMRNLKARLYDIQRQALD--AARSDARKSQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ + S ++G++D + A +A Sbjct: 302 ERIRTYNY-PQGRVSDHRINLTLYNLSQFMEGEMDQMINALIA 343 >gi|117926919|ref|YP_867536.1| peptide chain release factor 1 [Magnetococcus sp. MC-1] gi|226739111|sp|A0LDT7|RF1_MAGSM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|117610675|gb|ABK46130.1| bacterial peptide chain release factor 1 (bRF-1) [Magnetococcus sp. MC-1] Length = 361 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 161/285 (56%), Gaps = 11/285 (3%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTES 130 LA DD + Q + + +K ++E Q L+ D ND LE+ AG GG E+ Sbjct: 67 LAEAGDDAEMRQMAREERETLKNKLEQSQKHLHLMLLPKDPNDDKNVILEIRAGTGGEEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + + L RMY R+AE + ++ E L + G K +++G AY LK E GVHR+ Sbjct: 127 ALFVSDLFRMYGRFAEIKGWRIEMLSSSATDLGGYKELIAMVQGKGAYMGLKYESGVHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI ++ R HTS ++ + P D+ +E+ I + D RID YR+SG GGQ VNTTDSAV Sbjct: 187 QRIPVTETGGRIHTSAVTVAILPEADE-VELHIEDKDLRIDVYRSSGPGGQSVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV CQ E+SQHKNKA+A +L+A+L L+ Q++ + E+ K ++G G Sbjct: 246 RITHLPTGLVVICQDEKSQHKNKAKAMKVLQARL--LDAQQQAADSQRAEARKGQVGSGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ VL G L + + A A Sbjct: 304 RSERIRTYNF-PQSRVTDHRINLTLHKLDQVLQGGLAEVVDALTA 347 >gi|224130870|ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|222861718|gb|EEE99260.1| predicted protein [Populus trichocarpa] Length = 358 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/248 (40%), Positives = 147/248 (59%), Gaps = 14/248 (5%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 +AD D LEV AG+GG E+ +A + +MY R+++ +K E + I + + G K A+ Sbjct: 103 DADERDCILEVRAGSGGEEASLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASA 162 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G + +G LK E G+HR+ R+ + R HTS S+ + P D+ +++++ D RI Sbjct: 163 AISGADVFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADE-VDLQLRNEDLRI 221 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYR+ G+GGQH NTT+SAVRITH+PTG+ V Q ERSQH NK++A +L AKLYE+E Sbjct: 222 DTYRSGGSGGQHANTTNSAVRITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERS 281 Query: 291 K------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-L 343 + R IG ++E +IR+Y P V D R I S +DV+ G+ L Sbjct: 282 RLHMSRSRLRSEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGITHHSINDVMQGESL 335 Query: 344 DDFMKATL 351 D F+ A L Sbjct: 336 DVFIDALL 343 >gi|300933612|ref|ZP_07148868.1| peptide chain release factor 1 [Corynebacterium resistens DSM 45100] Length = 353 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 124/345 (35%), Positives = 185/345 (53%), Gaps = 21/345 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ + L + DP L + A+ + + L I ++++ D+ E+A Sbjct: 3 DDILAEYQGLEAQLGDPELHNDPAAARKVGKRFSELQPIIQTHQQLEQAREDHEAAAEMA 62 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTES 130 E D +E +LE E + E L+ D +D +E+ +GAGG E+ Sbjct: 63 SE--DAEFAEEAK------RLETEIAELEEKLTDLLAPRDPHDGDDIVMEIKSGAGGEEA 114 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPN---AYGWLKGEQ 185 +A L RMY R+AE+ F TE L++++ + G+K T+ I K P+ A+ K E Sbjct: 115 ALFAGELARMYQRYAERHGFATEVLDLNETDLGGVKDMTMSIRSKQPSRDGAWAEFKFEG 174 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ RI +S R TS + + VYP D+ +++I E D RID YR+SG GGQ VNT Sbjct: 175 GVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDEKDLRIDVYRSSGKGGQGVNT 234 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTGVVV CQ+ERSQ +NKA+A +L A+L ++E +K E A G +++ Sbjct: 235 TDSAVRITHLPTGVVVTCQKERSQIQNKARAMQVLAARLQQMEEEKAEAEAAEGRAAQIR 294 Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +IR+Y P V D R + + VL GDL+ A Sbjct: 295 TMDRSERIRTYNF-PESRVSDHRIGYKANNLDAVLGGDLESLFAA 338 >gi|291520820|emb|CBK79113.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus catus GD/7] Length = 357 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 114/354 (32%), Positives = 194/354 (54%), Gaps = 24/354 (6%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68 +FD D+ + R + + DP + + + LM+E+ Q L + K + + D Sbjct: 1 MFDRLDDILIRYQQIMEELNDPDVVNDQKHFRKLMKEQSDLQPLVEKYTEYKNTKQTIED 60 Query: 69 NLILLELALEEDDCSIL-------QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +L +LE+ EDD + E N+ +I+ E+ + + D + +E+ Sbjct: 61 SLEMLEV---EDDEEMKEMLKEELSEAKSNIAKIEQEL---KVLLIPKDPMDEKNVIVEI 114 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG E+ +A L RMY+++AE +++K E +++ + G K ++ G + Y + Sbjct: 115 RAGAGGDEAALFAAELFRMYSKYAESKRWKIEMMDVSENGIGGFKECVFMVSGDHVYSRM 174 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS ++ + P ++ +++EI +D RID RASG GGQ Sbjct: 175 KFESGVHRVQRVPETESGGRIHTSTVTVAIMPEAEE-VDVEIDMNDVRIDVMRASGNGGQ 233 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KL E+E++K+ A Sbjct: 234 CVNTTDSAVRLTHNPTGIVIYSQTEKSQLQNKEKAFRLLRSKLLEIEIEKKH--AEEAAL 291 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K ++G G +IR+Y P + R + D+++GDLD+ + + +A Sbjct: 292 RKNQVGTGDRSEKIRTYNF-PQGRCTEHRIKLTLYRLGDIMNGDLDEIIDSLIA 344 >gi|258652312|ref|YP_003201468.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233] gi|258555537|gb|ACV78479.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233] Length = 361 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 122/337 (36%), Positives = 178/337 (52%), Gaps = 11/337 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K DP + + ++ L R L ++ +++ D EL E D Sbjct: 19 LQVKLSDPAVHADQAVSRKLGRRYAELTPIVTTARDLAATRGDLQAAQELGAE--DAGFA 76 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 +E R+ E+E + E L + D D +EV AG GG ES +A LLRMY R+ Sbjct: 77 EEARTLAGRVD-ELEQRLSELLAPRDPDDGKDVLVEVKAGEGGEESALFAGDLLRMYLRY 135 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRLVRISPYDSN 199 AE+R +KTE L + + G K T+ +K P A + LK E GVHR+ R+ +S Sbjct: 136 AERRGWKTEVLSATESDLGGYKDVTVAVKSPAATPDGVWARLKFEGGVHRVQRVPVTESQ 195 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS + ++V P V+D ++EI+++D RID +R+SG GGQ VNTTDSAVRITH+PTG+ Sbjct: 196 GRVHTSAAGVFVAPEVEDVNDVEIADADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGI 255 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318 VV CQ E+SQ +NK QA +LRA++ + A S+ + ++R+Y Sbjct: 256 VVSCQNEKSQLQNKEQAMRILRARMLAAARATADAAAADARRSQVRTVDRSERVRTYNY- 314 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P + D R + + VLDGDLD + A A + Sbjct: 315 PENRIADHRVGYKAYNLDAVLDGDLDAVLDALSAADR 351 >gi|315453082|ref|YP_004073352.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179] gi|315132134|emb|CBY82762.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179] Length = 349 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 100/244 (40%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 104 DNKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEMIALI 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ +D RI+ Sbjct: 164 KGQGVYSRLKFEAGTHRVQRVPETESQGRIHTSAVTVAIMPEVDD-VEVNINPNDLRIEV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITHIPTG+ V Q E+SQHKN+ +A +L+A+LYE +++++ Sbjct: 223 FRAGGHGGQCVNTTDSAVRITHIPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 ++ AN ES K ++G G +IR+Y P + D R N+ S ++ L G+LD ++ Sbjct: 283 QQ-AN-SESRKMQVGSGDRSERIRTYNY-PQNRLSDHRINLTLYSLEEIMLSGNLDPVIE 339 Query: 349 ATLA 352 +A Sbjct: 340 PLIA 343 >gi|15828576|ref|NP_325936.1| peptide chain release factor 1 [Mycoplasma pulmonis UAB CTIP] gi|20139344|sp|Q98RA5|RF1_MYCPU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|14089518|emb|CAC13278.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Mycoplasma pulmonis] Length = 359 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 137/242 (56%), Gaps = 6/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A L MY++WA K L+ + G I Sbjct: 110 DELDVIMEIRGAAGGDEANIFAGDLFEMYSKWANNNNMKVSVLDRNYATSGGFTLIVFTI 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ RI +S R HTS +++ P +DD IE+EI+ SD +IDT Sbjct: 170 SGEKAYSKLKFESGVHRVQRIPVTESKGRVHTSTATVTAMPEIDDDIEVEINPSDLKIDT 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQ VNTTDSAVRITHIPTG++ Q+ RSQ N+ A +L+AKLY+ E QK+ Sbjct: 230 FRSSGAGGQSVNTTDSAVRITHIPTGIISSSQEGRSQISNRELALKILKAKLYDHENQKK 289 Query: 293 EEIANIGESSKTEIGWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 E +G+ K R +IR+Y P V D R N +S +++G L + + Sbjct: 290 LE--KVGQYRKLAGSGARSEKIRTYNY-PQDRVTDHRINF-SSSLKQIMEGKLQIIIDSL 345 Query: 351 LA 352 LA Sbjct: 346 LA 347 >gi|301629497|ref|XP_002943876.1| PREDICTED: peptide chain release factor 1-like [Xenopus (Silurana) tropicalis] Length = 460 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 143/240 (59%), Gaps = 6/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A+LE+ AG GG ES +A L R+YTR+A ++ E + ++ E G K L I Sbjct: 207 DARNAFLEIRAGTGGDESALFAGDLARVYTRYAATVGWRVEIMSANESELGGYKEVVLRI 266 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + YG L+ E G HR+ R+ ++ R HTS ++ V P D+ I ++ +D RIDT Sbjct: 267 EGDHVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEQQAIMLNPADLRIDT 326 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVR+ HIPTG+V +CQ RSQH NKA+A +L+A++ + E + Sbjct: 327 FRASGAGGQHINKTDSAVRVVHIPTGIVAECQDGRSQHSNKAKALQVLQARIQDKE--RS 384 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + IG G +IR+Y P D R N+ +++GDL + ++A Sbjct: 385 ERAAKEAAVRRGLIGSGDRSDRIRTYNF-PQGRFTDHRINLTLYKLLAIMEGDLGEVLQA 443 >gi|296121187|ref|YP_003628965.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776] gi|296013527|gb|ADG66766.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776] Length = 363 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 119/345 (34%), Positives = 188/345 (54%), Gaps = 19/345 (5%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQH--LDNAISFIKE---IQDRLCDNLILLELA 76 R L + +DP + +V +KML +R+H L S ++E +QD L +L A Sbjct: 15 RFEELEAQLQDPEVLADV--SKMLEIQREHGGLSKIASTVREFNTLQDDLLAAETMLAEA 72 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS---NDAYLEVHAGAGGTESQDW 133 +++ I Q D L + + E + E +++ DS +E+ AG GG E+ + Sbjct: 73 TDDETKEIAQAEIDEL-KPRFEPLKTELEDMVTA-GDSLTRGSLIMEIRAGTGGDEAALF 130 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L MYTR+ + + +K E +E+ E G+K + I G AY L+ E G HR+ R+ Sbjct: 131 ARDLYEMYTRYVDLQGWKYEVMELTTSELGGLKEVVITITGSGAYHRLQFESGGHRVQRV 190 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V + I++EI + D RIDT RA G GGQ VN T+SAVRIT Sbjct: 191 PETETQGRVHTSAATVAVMAEASE-IDVEIRDEDLRIDTMRAGGPGGQKVNKTESAVRIT 249 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIP+G+VV+ Q E+SQHKNKA+A +LR++L +EL++ + A E +T +G G Sbjct: 250 HIPSGLVVRIQDEKSQHKNKAKALRVLRSRL--MELRESQAHAVRAEQRRTLVGSGDRSE 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + ++ G+LD+ + LA + Sbjct: 308 RIRTYNF-PQNRLTDHRIGLTVYKLDQIMQGNLDELINPILAFDR 351 >gi|116493078|ref|YP_804813.1| peptide chain release factor 1 [Pediococcus pentosaceus ATCC 25745] gi|116103228|gb|ABJ68371.1| bacterial peptide chain release factor 1 (bRF-1) [Pediococcus pentosaceus ATCC 25745] Length = 359 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 118/312 (37%), Positives = 174/312 (55%), Gaps = 24/312 (7%) Query: 47 RERQHLDNAISFIKEIQ----DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 RE + +AI+ +E+Q D D+L+ ELA L+ET + LE E K Sbjct: 51 REYRKTVDAIAENEELQREKLDPEMDSLVKAELAE-------LRET-----KATLEEEIK 98 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 L + D + +E+H AGG E+ +A L MYTR+AE + +K E ++ + + Sbjct: 99 IL-MLPTDPNDDKNIIMEIHGAAGGDEASLFAADLYNMYTRYAETQGWKVEVVDENATDV 157 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K L+I G Y LK E G HR+ R+ +S R HTS S++ V P +D ++IE Sbjct: 158 GGFKEIVLMISGNKVYSKLKYENGAHRVQRVPVTESAGRVHTSTSTVGVMPEAED-VDIE 216 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I + D R D YR+SGAGGQH+N T SAVR+TH+PTG+VV Q ERSQ +N+ +A +L+A Sbjct: 217 IDQKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNREKAMRILKA 276 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++Y+ Q +EE A E K+ +G G +IR+Y P V D R + V+ Sbjct: 277 RVYDY-YQTQEEDAYNAE-RKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVM 333 Query: 340 DGDLDDFMKATL 351 +G+LDD + A + Sbjct: 334 NGELDDIIDALI 345 >gi|301094068|ref|XP_002997878.1| peptide chain release factor 1 [Phytophthora infestans T30-4] gi|262109801|gb|EEY67853.1| peptide chain release factor 1 [Phytophthora infestans T30-4] Length = 366 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 102/246 (41%), Positives = 148/246 (60%), Gaps = 9/246 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD + LE+ AG+GG E+ +A +L+MY + A + +K E + I + + G+K Sbjct: 114 EADDKSSILEIRAGSGGDEACLFAGDILKMYQKVALAKGWKFELMSISETDLGGVKECVC 173 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G AYG +K E GVHR+ R+ D R HTS S+ V P ++ +E+EI D RI Sbjct: 174 SLTGRGAYGRMKFESGVHRVQRVPVNDV--RVHTSAVSVVVLPEAEE-VEVEIDPKDLRI 230 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D YRASGAGGQHVNTT+SAVRITHIPTG+V Q ERSQH+NKA+A +LRA++++ + Sbjct: 231 DVYRASGAGGQHVNTTESAVRITHIPTGIVAAVQDERSQHQNKAKALKILRARVFDGIRR 290 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 KR+ A +++G G ++R+Y P V D R N+ +L+G+L D + Sbjct: 291 KRD--AERQTMRNSQVGSGDRSERVRTYNF-PQSRVSDHRVNVTVFGIERMLNGELLDEI 347 Query: 348 KATLAI 353 L + Sbjct: 348 VDALVV 353 >gi|323342350|ref|ZP_08082582.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463462|gb|EFY08656.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 359 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 143/243 (58%), Gaps = 7/243 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +DS DA +E+ AGG E +A L RMYTR+AE +K E +E D E G + + Sbjct: 109 SDSFDAIVEIRGAAGGDEGNIFAGDLYRMYTRYAESLGYKYELIEAMDAEAGGYSLISFV 168 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KG + K E G HR+ R+ ++ R HTS +++ V V+D EI+I +D ID Sbjct: 169 VKGAEPFRHFKFESGAHRVQRVPKTETQGRIHTSTATVLVLADVEDE-EIDIDPNDLEID 227 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+SGAGGQHVN TDSAVRI H PTG+ V+CQ RSQH NK +A ++RA++YE E Q+ Sbjct: 228 TMRSSGAGGQHVNKTDSAVRIVHKPTGIAVKCQDGRSQHDNKDKAMRLVRARVYE-EHQR 286 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R + GE ++++G G +IR+Y P V D R + +++G LD+ + Sbjct: 287 RIQEERHGE-RQSKVGTGARSEKIRTYNY-PQNRVSDHRIGLTLQKLDIIMEGKLDEIVN 344 Query: 349 ATL 351 A L Sbjct: 345 ALL 347 >gi|40062641|gb|AAR37562.1| peptide chain release factor 1 [uncultured marine bacterium 313] Length = 358 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 99/235 (42%), Positives = 146/235 (62%), Gaps = 7/235 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EADS +A +E+ AG GG E+ + L +MY + +K+ E + + E G K L Sbjct: 105 EADSKNAIVEIRAGTGGLEATLFVADLYKMYEKVCLNKKWSFEIINLSKSEAGGFKEVIL 164 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 LIKG N Y +LK E GVHR+ R+ ++ R HTS +++ V P ++ ++++I + D RI Sbjct: 165 LIKGANIYSFLKFESGVHRVQRVPETETQGRVHTSAATVAVLPEAEE-VDVKIEDKDLRI 223 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +R++GAGGQ VNTTDSAVRITHIPTG+VV Q E+SQHKN+A+ +LR+++YE E + Sbjct: 224 DVFRSTGAGGQSVNTTDSAVRITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRIYESERE 283 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 K+E+ + K +IG G +IR+Y P V D R N+ + L+GD Sbjct: 284 KKEKERS--RDRKNQIGTGDRSERIRTYNF-PQGRVTDHRINLTIHKLQEFLNGD 335 >gi|297821206|ref|XP_002878486.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp. lyrata] gi|297324324|gb|EFH54745.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp. lyrata] Length = 417 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 109/339 (32%), Positives = 193/339 (56%), Gaps = 15/339 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82 L+ K DP + N E + L + LD ++ + +D +L ++ +L + A +++D Sbjct: 71 LSVKLADPAVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDM 130 Query: 83 SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + + + N I++E KQ + LL S D+ + LEV AG GG E+ W L+RM Sbjct: 131 AEMIGSEINSLSIEIEGLEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRM 190 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R++E+ +K + + E G K+ + IKG Y LK E GVHR+ R+ ++ Sbjct: 191 YQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQG 250 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ + P D+ +E+ I D + + R+ GAGGQ+VN ++A+ + H P+G+ Sbjct: 251 RVHTSTATVAIMPEADE-VEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIR 309 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 + C +ER+Q +NKA+A+ +LRAKLYE+++++++E I K+++G G +IR+Y Sbjct: 310 IFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERKSQVGTGARSEKIRTYNY 367 Query: 318 QPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++ L+ N TS LDG L+D ++A A+++ Sbjct: 368 KDSRVTDHRLKMNFALTS---FLDGALEDAVQACAALEQ 403 >gi|42569997|ref|NP_182225.3| peptide chain release factor, putative [Arabidopsis thaliana] gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis thaliana] gi|330255695|gb|AEC10789.1| Peptide chain release factor 1 [Arabidopsis thaliana] Length = 413 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 8/245 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD D LEV AG GG E+ +A + RMY R+++K+ +K + ++I + + G K A+ Sbjct: 158 EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASA 217 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G + YG LK E G+HR+ RI + + R HTS S+ + P D+ +++++ D RI Sbjct: 218 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADE-VDVQLRNEDLRI 276 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYR+ G+GGQH NTT+SAVRI H+PTG++V Q ERSQH N+A+A +L A+LYE+E Sbjct: 277 DTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERL 336 Query: 291 KREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDF 346 + + ++ + +IG G +IR+Y P V D R I + D++ G +LD F Sbjct: 337 RIQ--SSRSKLRSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQGENLDMF 393 Query: 347 MKATL 351 + A L Sbjct: 394 IDALL 398 >gi|226942019|ref|YP_002797093.1| PrfA [Laribacter hongkongensis HLHK9] gi|254790885|sp|C1D5R7|RF1_LARHH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226716946|gb|ACO76084.1| PrfA [Laribacter hongkongensis HLHK9] Length = 359 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 106/269 (39%), Positives = 156/269 (57%), Gaps = 6/269 (2%) Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E SD +R+ + Q L D + +LEV AG GG E+ +A L RMY+R+AE Sbjct: 81 ELSDGQERLAVLELELQKLLLPKDPNDERNIFLEVRAGTGGDEAALFAADLFRMYSRYAE 140 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +++ E + + + G K I G AY LK E G HR+ R+ ++ R HTS Sbjct: 141 RNRWQVEIVSASENDLGGFKEVIARIVGFGAYSRLKFESGGHRVQRVPATETQGRIHTSA 200 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 ++ V P D+ +E++ +D RIDT+RASGAGGQH+N TDSAVR+TH+PTG+VV+CQ + Sbjct: 201 CTVAVMPEADELAAVELNPADLRIDTFRASGAGGQHINKTDSAVRVTHLPTGIVVECQDD 260 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323 RSQHKNKA+A +L A++ +++ + R++ K+ IG G +IR+Y P V Sbjct: 261 RSQHKNKARALAVLAARIQDVQQRARQQ--KEAAERKSLIGSGDRSERIRTYNF-PQGRV 317 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R N+ V+DGDL + A A Sbjct: 318 TDHRINLTLYRLDAVMDGDLAELTDALTA 346 >gi|58038522|ref|YP_190486.1| peptide chain release factor 1 [Gluconobacter oxydans 621H] gi|81557234|sp|Q5FUR9|RF1_GLUOX RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|58000936|gb|AAW59830.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Gluconobacter oxydans 621H] Length = 353 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 146/242 (60%), Gaps = 9/242 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AGG E+ +A L Y R++E+ ++ E +E + E AG+K Sbjct: 102 ADERSAILEIRPAAGGDEAGLFAAELFDAYRRFSEQNGWRFEVMEYAENEVAGLKEGMAT 161 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + + LK E GVHR+ R+ +S R HTS ++ V P ++ +++ +++ D RID Sbjct: 162 ISGRSVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEE-VDVTVNDDDLRID 220 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YRASGAGGQHVN T+SAVR+TH+P+G+VV Q+E+SQHKNKA+A +LRA+LYE E Sbjct: 221 VYRASGAGGQHVNKTESAVRVTHMPSGIVVAMQEEKSQHKNKAKAMKILRARLYERE--- 277 Query: 292 REEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 R ++ A K+++G G +IR+Y P V D R N+ ++ G+ D+ + Sbjct: 278 RAQLHATRAADRKSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLYKIDRIMGGEFDEII 336 Query: 348 KA 349 A Sbjct: 337 DA 338 >gi|3522941|gb|AAC34223.1| putative peptide chain release factor [Arabidopsis thaliana] Length = 395 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 100/245 (40%), Positives = 151/245 (61%), Gaps = 8/245 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD D LEV AG GG E+ +A + RMY R+++K+ +K + ++I + + G K A+ Sbjct: 140 EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASA 199 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G + YG LK E G+HR+ RI + + R HTS S+ + P D+ +++++ D RI Sbjct: 200 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADE-VDVQLRNEDLRI 258 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYR+ G+GGQH NTT+SAVRI H+PTG++V Q ERSQH N+A+A +L A+LYE+E Sbjct: 259 DTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERL 318 Query: 291 KREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDF 346 + + ++ + +IG G +IR+Y P V D R I + D++ G +LD F Sbjct: 319 RIQ--SSRSKLRSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQGENLDMF 375 Query: 347 MKATL 351 + A L Sbjct: 376 IDALL 380 >gi|332521778|ref|ZP_08398229.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4] gi|332042608|gb|EGI78809.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4] Length = 358 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/232 (39%), Positives = 144/232 (62%), Gaps = 3/232 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +E+ AG GG E+ +A L RMYT++ E + ++ + ++ +G G K + Sbjct: 106 DAKNAVVELRAGTGGDEASIFAGDLYRMYTKYCESKGWRVDTVDYSEGTNGGFKEIQFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS +++ V+P ++ ++EI D RID Sbjct: 166 SGDDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVFPEAEE-FDVEIDPKDVRIDY 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K+ Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKK 284 Query: 293 -EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 EE A + + T +IR+Y P V D R + S++++GD+ Sbjct: 285 MEEDAALRGTMVTSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLSNIVNGDI 335 >gi|299821847|ref|ZP_07053735.1| peptide chain release factor RF1 [Listeria grayi DSM 20601] gi|299817512|gb|EFI84748.1| peptide chain release factor RF1 [Listeria grayi DSM 20601] Length = 358 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 120/349 (34%), Positives = 190/349 (54%), Gaps = 16/349 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 ++D +V+ R LN DP + + + L +E+ + + KE+ D++ + Sbjct: 1 MYDRLQSVENRYEELNELLSDPDVVSDPKRLRDLSKEQSSISQTVETYRDYKEVTDQIAE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 LL L++D + +E + LQ K +E K L+ + D + +E+ AGG Sbjct: 61 TKELLNEKLDDDMREMAKEELNELQENKTHLEEKLKLLLVPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE R +K E ++ + G K ++I G A+ LK E G Sbjct: 121 DEAALFAGDLFRMYSRYAESRGWKAEIMDANPTGIGGYKEVIVMINGDGAFSRLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ + P +D +EI+I + D R DT+ ++GAGGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAILPEAED-VEIDIQDKDIRTDTFASTGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSKTE 305 SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + REE AN K+ Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQIKNKEKAMKVLRARIYDKFEREAREEYDAN----RKSA 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R + V++G +D+ + A + Sbjct: 296 VGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVMEGKIDEIIDALI 343 >gi|126736399|ref|ZP_01752141.1| peptide chain release factor 1 [Roseobacter sp. CCS2] gi|126714220|gb|EBA11089.1| peptide chain release factor 1 [Roseobacter sp. CCS2] Length = 351 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 103/250 (41%), Positives = 149/250 (59%), Gaps = 8/250 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L AD+ A LE+ G GG E+ +A LLRMY R+AE + ++ E LE E Sbjct: 92 QLALLPKDAADARPALLEIRPGTGGDEAGLFAADLLRMYQRYAEGQGWRFEILEESLSEL 151 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G+K I G + +K E GVHR+ R+ +S R HTS +++ V P +D ++IE Sbjct: 152 GGVKEVVARIVGDGVFAKMKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDIE 210 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RIDT RASG+GGQHVNTTDSAVRI HIPTG++V E+SQH+N+ A +L+ Sbjct: 211 INANDLRIDTMRASGSGGQHVNTTDSAVRILHIPTGMIV-VSSEKSQHRNREIAMQVLKT 269 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 +L++LE QK ++ K ++G G +IR+Y P + D R N+ S + V+ Sbjct: 270 RLFDLERQKVDD--ERSADRKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYSLNQVM 326 Query: 340 DGDLDDFMKA 349 GDL++ + A Sbjct: 327 QGDLEEIVNA 336 >gi|163850388|ref|YP_001638431.1| peptide chain release factor 1 [Methylobacterium extorquens PA1] gi|218528948|ref|YP_002419764.1| peptide chain release factor 1 [Methylobacterium chloromethanicum CM4] gi|240137464|ref|YP_002961935.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1] gi|254559642|ref|YP_003066737.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4] gi|226739112|sp|A9W1A4|RF1_METEP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790888|sp|B7L246|RF1_METC4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|163661993|gb|ABY29360.1| peptide chain release factor 1 [Methylobacterium extorquens PA1] gi|218521251|gb|ACK81836.1| peptide chain release factor 1 [Methylobacterium chloromethanicum CM4] gi|240007432|gb|ACS38658.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1] gi|254266920|emb|CAX22719.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4] Length = 361 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 147/242 (60%), Gaps = 8/242 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG E+ +A L RMY R+AE + ++ E + +G G + Sbjct: 108 ADEKSAILEIRAGTGGDEAALFAGDLFRMYARYAESKGWRVEVISESEGTAGGYREVVAE 167 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KG + + LK E G HR+ R+ ++ R HTS +++ V P ++ ++I ++E+D +ID Sbjct: 168 VKGRSVFSRLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAEE-VDIVVNEADLKID 226 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RA GAGGQHVN T+SA+RITHIPTGVVV Q+ERSQHKN+A+A ++LR+KL++ E Sbjct: 227 TMRAQGAGGQHVNKTESAIRITHIPTGVVVFVQEERSQHKNRARAMSLLRSKLFDAERTA 286 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 ++ + K ++G G +IR+Y P V D R N+ +V+ G LD+ + Sbjct: 287 KD--SARAADRKAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGQALDEVI 343 Query: 348 KA 349 A Sbjct: 344 DA 345 >gi|300858256|ref|YP_003783239.1| peptide chain release factor RF-1 [Corynebacterium pseudotuberculosis FRC41] gi|300685710|gb|ADK28632.1| peptide chain release factor RF-1 [Corynebacterium pseudotuberculosis FRC41] gi|302205977|gb|ADL10319.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis C231] gi|302330530|gb|ADL20724.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis 1002] gi|308276212|gb|ADO26111.1| Peptide chain release factor RF-1 [Corynebacterium pseudotuberculosis I19] Length = 356 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 106/249 (42%), Positives = 150/249 (60%), Gaps = 7/249 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +EV AGAGG E+ +A L+RMY R+A+K F E L+ + + G+K TL I Sbjct: 102 DGDDIVMEVKAGAGGEEAALFAGELVRMYQRYADKHGFAIEVLDSSESDLGGVKDMTLSI 161 Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K P+ A+ K E GVHR+ R+ +S R TS + + VYP D+ EIEI + D Sbjct: 162 RSKTPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEIEIDDKD 221 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +NKA+A +L A+L + Sbjct: 222 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQSM 281 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ E A G +++ + +IR+Y P + D R + + VL+G+LDD Sbjct: 282 AEEQAEAEAAEGRAAQIRTMDRSERIRTYNW-PENRISDHRIGFKANNLDSVLNGELDDL 340 Query: 347 MKATLAIKK 355 A A ++ Sbjct: 341 FTALRAAER 349 >gi|218886539|ref|YP_002435860.1| peptide chain release factor 1 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226739101|sp|B8DLL6|RF1_DESVM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|63852197|dbj|BAD98449.1| peptide release factor 1 [Desulfovibrio vulgaris] gi|218757493|gb|ACL08392.1| peptide chain release factor 1 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 357 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 93/227 (40%), Positives = 139/227 (61%), Gaps = 7/227 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AG GG E+ +A L RMY+R+AE R +K E L ++ + G K LI G Y Sbjct: 111 VEIRAGTGGEEAALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEVIALIVGDKVY 170 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E G HR+ R+ +S R HTS +++ + P ++ +++EI D RID +RASGA Sbjct: 171 SRLKFESGTHRVQRVPATESQGRIHTSAATVAILPEAEE-VDVEIRPDDIRIDVFRASGA 229 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SAVRITH+P+G+VV CQ E+SQHKNKA+A +L ++L + E ++ + Sbjct: 230 GGQHVNKTESAVRITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQHN--EM 287 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 ++++G G +IR+Y P V D R N+ S V++G+ Sbjct: 288 AADRRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYSLDRVMEGE 333 >gi|156742398|ref|YP_001432527.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941] gi|156233726|gb|ABU58509.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941] Length = 364 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 115/309 (37%), Positives = 174/309 (56%), Gaps = 13/309 (4%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQF 104 RE + L A ++++ ++ D LLE ++D + Q+ D+L +R +LE + K Sbjct: 43 RELEPLVEAYRAYRDVERQIEDTSFLLEHETDQDVRQLAQDELDHLLERRAQLEQQIKVL 102 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 L DS +A +E+ G GG E+ +A L RMYTR+AE+R + E + + G Sbjct: 103 -LLPRDPNDSKNAIMELRQGEGGDEAALFAADLFRMYTRYAEQRGWDIEVISATENGPGG 161 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K ++G AY LK E GVHR+ R+ ++ R HTS +++ V P V+++ +IE++ Sbjct: 162 YKEIIFEVRGEGAYSRLKYEGGVHRVQRVPATEARGRIHTSTATVAVLPEVEET-DIELN 220 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLR 281 SD R+D +R+ G GGQ VNTTDSAVRI + P +VV CQ RSQ KNKA A +LR Sbjct: 221 PSDYRVDVFRSGGHGGQGVNTTDSAVRIVYKPGTPEEIVVTCQDSRSQLKNKASALAVLR 280 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 A+LY E +KR + +GE+ ++G G +IR+Y P V D R ++ + Sbjct: 281 ARLYAREEEKRRK--ELGETRLAQVGAGERAEKIRTYNF-PQDRVTDHRIGQNFSNLPGI 337 Query: 339 LDGDLDDFM 347 LDGDLD + Sbjct: 338 LDGDLDRLI 346 >gi|327441448|dbj|BAK17813.1| protein chain release factor A [Solibacillus silvestris StLB046] Length = 358 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 116/347 (33%), Positives = 187/347 (53%), Gaps = 12/347 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCD 68 +FD AV+ R LN DP + + + + +E+ Q + + K ++++L D Sbjct: 1 MFDRLQAVEDRYERLNELLSDPDIVSDSNKLREYSKEQSDIQEMVDVYRVYKSVKEQLAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 L+E+ + + +++E ++L + E+E + L+ + DS + +E+ AGG Sbjct: 61 TRELMEIEKDAEMLEMMKEEFNDLNKQVPELEERLRILLIPKDPNDSKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +K + +E G K L+I G AY K E G Sbjct: 121 DEANIFAGDLFRMYTRYAETQGWKVDVMEATPNPAGGYKEVILMINGQGAYSKFKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P V ++EI E D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEVHVE-DVEIHEKDIRVDTFASSGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV Q ERSQ KN+ +A +L A++ + ++E A I + KT +G Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILVARV--ADKHRQEAQAEIDATRKTAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + +++G LD+ + A + Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALI 343 >gi|222053788|ref|YP_002536150.1| peptide chain release factor 1 [Geobacter sp. FRC-32] gi|221563077|gb|ACM19049.1| peptide chain release factor 1 [Geobacter sp. FRC-32] Length = 356 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 103/266 (38%), Positives = 153/266 (57%), Gaps = 14/266 (5%) Query: 93 QRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 QR LE E K LL D ND LE+ AG GG E+ +A L RMY+R+AE + Sbjct: 85 QRDALESEIK----LLLLPKDPNDDKSVILEIRAGTGGDEAALFAGDLFRMYSRFAETNR 140 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E + + E+ G K ++G + LK E G HR+ R+ ++ R HTS ++ Sbjct: 141 WRVEVISSSESEKGGFKEVVASVEGEGVFAKLKYESGTHRVQRVPETEAQGRIHTSACTV 200 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +D ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ+ERSQ Sbjct: 201 AIMPEAED-VDIDINPTDLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQEERSQ 259 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326 KN+A+A +L+ ++ + LQ E+ A + K ++G G +IR+Y P + D Sbjct: 260 IKNRAKAMKVLKTRILDNILQ--EQNAKLAADRKQQVGSGDRSERIRTYNF-PQGRMTDH 316 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352 R + ++ GD+ + A A Sbjct: 317 RIGLTLYRLDAIMAGDIAEIADALRA 342 >gi|146337703|ref|YP_001202751.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278] gi|146190509|emb|CAL74508.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278] Length = 361 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 103/257 (40%), Positives = 151/257 (58%), Gaps = 8/257 (3%) Query: 90 DNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 D L + E+E K +LL +A D + LE+ AG GG E+ +A L RMY R+A + Sbjct: 84 DELVARRGELEQKIRIALLPKDAMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQ 143 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K E + +G G K ++G A+ LK E GVHR+ R+ ++ R HTS ++ Sbjct: 144 GWKVEVISASEGTVGGYKEIIAEVQGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAAT 203 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P ++D ++++I + D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV Q RS Sbjct: 204 VAVLPEIED-VDVDIKQDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRS 262 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKD 325 QHKN+A A N+LR+++Y+ E QK + A K ++G G +IR+Y P V D Sbjct: 263 QHKNRASAMNILRSRIYDAERQKVD--AARSAERKEKVGSGDRSERIRTYNF-PQGRVTD 319 Query: 326 LRTNIEKTSPSDVLDGD 342 R N+ V+ G+ Sbjct: 320 HRINLTLYKLPQVIAGE 336 >gi|330444669|ref|YP_004377655.1| peptide chain release factor 1 [Chlamydophila pecorum E58] gi|328807779|gb|AEB41952.1| peptide chain release factor 1 [Chlamydophila pecorum E58] Length = 363 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 120/343 (34%), Positives = 185/343 (53%), Gaps = 16/343 (4%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRER---QHLDNAISFIKEIQDRLCDNLILLELA 76 + RL + + P ++ + E K L +E L A + ++E + L D+ L + Sbjct: 11 LSRLEEIEVRLSSPEIFDHPEEYKALSKEHARLSELKEAYAQLQEQEKILADDKQALSME 70 Query: 77 LEEDDCSILQETSDNLQRIKLEVEY--KQFESLLSGEADSND--AYLEVHAGAGGTESQD 132 + + ++L+E L K E E K E+LL +D +E+ AG GG E+ Sbjct: 71 KDPEMIAMLEE---GLVEGKAETERLRKVLENLLVPPDPDDDLNVIMELRAGTGGEEAAL 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + +RMY ++ + +K E L + + G K + I G +L+ E G HR+ R Sbjct: 128 FVGDCVRMYHLYSAAKGWKYEVLSSSESDLKGYKEYVMGISGTGVKRFLQYEAGTHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ + P + EI I E D RIDT+RASGAGGQHVN TDSAVRI Sbjct: 188 VPETETQGRVHTSAITVAILPEPAEDDEIIIDEKDLRIDTFRASGAGGQHVNVTDSAVRI 247 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV CQ ERSQHKNK +A +L+A++ + E+QKR++ A+ S+ ++G G Sbjct: 248 THLPTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRQKEASAMRSA--QVGSGDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y + V D R + S V++GDLD A ++ Sbjct: 306 ERIRTYNFSQNR-VTDHRIGLTLYSLDKVMEGDLDPITTALVS 347 >gi|303326242|ref|ZP_07356685.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3] gi|302864158|gb|EFL87089.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3] Length = 356 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 138/240 (57%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMYTR+AE + +K E + E G K LI Sbjct: 105 DEKNTILEIRAGTGGEEAALFAADLFRMYTRYAELQGWKVEIMSESPSESGGYKEIICLI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ ++ R HTS +++ V P ++ +++EI D RID Sbjct: 165 AGDRVYSRLKFEAGTHRVQRVPATETQGRIHTSAATVAVMPEAEE-VDVEIRPEDLRIDI 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN T+SAVRITH+PT VV CQ ERSQHKNKA+A +L +++ E +++ Sbjct: 224 YRASGAGGQHVNKTESAVRITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQ 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + K ++G G +IR+Y P D R N+ S +++G+L A Sbjct: 284 N--SELSADRKAQVGSGDRSERIRTYNF-PQGRCTDHRINLTLYSLDRIMEGELTPLFDA 340 >gi|315122704|ref|YP_004063193.1| peptide chain release factor 1 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496106|gb|ADR52705.1| peptide chain release factor 1 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 357 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 147/243 (60%), Gaps = 10/243 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D LE+ AG GG+E+ + L RMY R+A +K+K E L D ++ G K I Sbjct: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYATYQKWKVEILSSSDNDDGGYKEIVATI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + +K E GVHR+ R+ +++ R HTS +++ V P ++ I++ I+ D RIDT Sbjct: 168 SGNGVFYRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAEE-IDVAIATEDIRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG+GGQHVNTTDSAVRITHIPTG++V E+SQH+N+ QA +LRA+LY++E R Sbjct: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLQAMKVLRARLYDIE---R 282 Query: 293 EEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + +A+ E+ K +IG G +IR+Y P + D R N+ VL G LD+ + Sbjct: 283 KRMAHERSENRKAQIGSGDRSERIRTYNF-PQGRITDHRINLTLYKLEYVLQGYLDEIVN 341 Query: 349 ATL 351 A L Sbjct: 342 ALL 344 >gi|162147699|ref|YP_001602160.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus PAl 5] gi|209542323|ref|YP_002274552.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus PAl 5] gi|189039975|sp|A9HJ50|RF1_GLUDA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|161786276|emb|CAP55858.1| putative peptide chain release factor 1 [Gluconacetobacter diazotrophicus PAl 5] gi|209530000|gb|ACI49937.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus PAl 5] Length = 352 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 99/242 (40%), Positives = 140/242 (57%), Gaps = 7/242 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD A LE+ AGG E+ +A L Y R+A R ++ E +E + E G++ Sbjct: 100 EADERSAILEIRPAAGGDEAALFAAELFDAYRRYAALRGWRFEIMEFDESELGGLREGIA 159 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G + LK E GVHR+ R+ +S R HTS ++ V P D ++++I++ D RI Sbjct: 160 NITGRGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAGD-VDVQINDGDLRI 218 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D YRASGAGGQHVN T+SAVRITH+PTG+VV Q+E+SQHKN+A+A +L A+LYE E Sbjct: 219 DVYRASGAGGQHVNKTESAVRITHLPTGLVVAMQEEKSQHKNRAKAMKILMARLYERERA 278 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K+++G G +IR+Y P V D R N+ V+ G+ D+F+ Sbjct: 279 AAHATRA--ADRKSQVGTGDRSERIRTYNF-PQGRVTDHRINLTAYKIDRVMMGEFDEFV 335 Query: 348 KA 349 A Sbjct: 336 DA 337 >gi|313676496|ref|YP_004054492.1| bacterial peptide chain release factor 1 (brf-1) [Marivirga tractuosa DSM 4126] gi|312943194|gb|ADR22384.1| bacterial peptide chain release factor 1 (bRF-1) [Marivirga tractuosa DSM 4126] Length = 355 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 102/259 (39%), Positives = 154/259 (59%), Gaps = 8/259 (3%) Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +R +LE E K+ + DS +A LE+ AG GG E+ +A L +MY R+ +K Sbjct: 87 ERDRLEEELKKM-LIPKDPNDSKNAVLEIRAGTGGDEAAIFAGDLFKMYQRFCDKNGLNL 145 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 L++ G G K + G NAYG LK E GVHR+ R+ ++ R HTS +++ V Sbjct: 146 TVLDLTFGTAGGYKEIISTVTGKNAYGTLKYESGVHRVQRVPQTETQGRVHTSAATVAVL 205 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD +E+EI +D R DTY +SG GGQ VNTT SAVR+TH PTG+VV CQ ++SQ KN Sbjct: 206 PEIDD-VEVEIDMNDVRKDTYCSSGPGGQSVNTTYSAVRLTHEPTGLVVTCQDQKSQIKN 264 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329 +A +LR++LYE+EL K+ E +G ++ + G +IR+Y P V D R N Sbjct: 265 FDKALRVLRSRLYEIELAKQNE--EVGAQRRSIVRSGDRSDKIRTYNY-PQGRVTDHRIN 321 Query: 330 IEKTSPSDVLDGDLDDFMK 348 + ++++G+++D ++ Sbjct: 322 YTVHNLPNIMNGEIEDLIE 340 >gi|38233635|ref|NP_939402.1| peptide chain release factor 1 [Corynebacterium diphtheriae NCTC 13129] gi|81564890|sp|Q6NHU0|RF1_CORDI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|38199895|emb|CAE49561.1| peptide chain release factor 1 (RF-1) [Corynebacterium diphtheriae] Length = 356 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 106/249 (42%), Positives = 150/249 (60%), Gaps = 7/249 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +EV AGAGG E+ +A L+RMY R+AEK F E L + + + G+K TL I Sbjct: 102 DGDDIVMEVKAGAGGEEAALFAGELVRMYQRYAEKHGFTVEVLGLSESDLGGVKDMTLSI 161 Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K P+ A+ K E GVHR+ R+ +S R TS + + VYP D+ E+EI + D Sbjct: 162 RSKTPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEVEIDDKD 221 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +NKA+A +L A+L + Sbjct: 222 LRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQAM 281 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ E A G +++ + +IR+Y P + D R + + VL+GDLDD Sbjct: 282 AEEQAEAEAAEGRAAQIRTMDRSERIRTYNW-PENRISDHRIGYKANNLDSVLNGDLDDL 340 Query: 347 MKATLAIKK 355 A A ++ Sbjct: 341 FSALQAAER 349 >gi|293363656|ref|ZP_06610406.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2] gi|292552763|gb|EFF41523.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2] Length = 354 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 96/243 (39%), Positives = 144/243 (59%), Gaps = 4/243 (1%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E DS + +E+ AGG E+ +A L RMY +W+++ + + L+ E G T Sbjct: 103 ENDSKNVIVEIRGAAGGDEANIFAGDLFRMYQKWSDQNDMRLKVLDETRAEAGGFTLITF 162 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G Y LK E GVHR+ RI ++ R HTS +++ V P +DD IEIE+ D R+ Sbjct: 163 TVTGEKPYSKLKFESGVHRVQRIPVTETKGRVHTSTATVTVMPEIDDDIEIEVKPEDIRV 222 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +R+SG GGQ VNTTDSAVR+TH TG+VV CQ+ +SQ +NK A +L++KLY+LEL+ Sbjct: 223 DVFRSSGNGGQSVNTTDSAVRLTHNATGIVVSCQEGKSQIQNKEIAMRILKSKLYDLELK 282 Query: 291 KREEIANIGESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K++E + G +G+ +IR+Y P V D R + TS S V++G ++ + + Sbjct: 283 KKQEEES-GYRKLAGLGFRSEKIRTYNY-PQDRVTDHRISY-STSLSPVMEGKVNSIIDS 339 Query: 350 TLA 352 L Sbjct: 340 LLT 342 >gi|108759492|ref|YP_633064.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622] gi|20139339|sp|Q93NC7|RF1_MYXXA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361565|sp|Q1D2Q9|RF1_MYXXD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|14517940|gb|AAK64443.1|AF377339_4 peptide chain release factor RF-1 [Myxococcus xanthus] gi|108463372|gb|ABF88557.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622] Length = 362 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 113/339 (33%), Positives = 191/339 (56%), Gaps = 18/339 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL--- 77 +R L +P + + + + +ER L+ + + + L D L +E L Sbjct: 10 RRFERLTADLSNPDVLADSARLQKVSKERAGLEKLVEAFRTYRKVLAD-LSEVEAWLGSS 68 Query: 78 EEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWA 134 + D+ + +E+ L QR +LE K LL + D + LE+ AGAGG E+ +A Sbjct: 69 DADEKAFARESLPGLKEQRDELEASLKIL--LLPKDPNDEKNVILEIRAGAGGDEAALFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +++MY R+A++R +K + L++ G G+K AT+ + G + +K E GVHR+ R+ Sbjct: 127 EEVMQMYLRYADRRGWKADILDMSPGNAGGVKDATVTLSGDAVFSSMKYESGVHRVQRVP 186 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P +D ++++++ +D + R++G+GGQ VNTTDSAVR+ H Sbjct: 187 ATETQGRIHTSTITVSVMPEAED-VDVQVNPADIEMQVMRSTGSGGQSVNTTDSAVRLIH 245 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS-KTEIGWG---R 310 PTG+VV+CQQE+SQ KN+ A MLRAKLY++E +E I N +S+ + ++G G Sbjct: 246 HPTGIVVKCQQEKSQLKNRTMAMRMLRAKLYDIE---QERIRNERDSARRAQVGTGDRSE 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R + + V+ GD++D + A Sbjct: 303 KIRTYNF-PQDRLTDHRIGLTVHNLPGVMAGDVEDVITA 340 >gi|85705322|ref|ZP_01036421.1| peptide chain release factor 1 [Roseovarius sp. 217] gi|85670195|gb|EAQ25057.1| peptide chain release factor 1 [Roseovarius sp. 217] Length = 426 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 100/256 (39%), Positives = 151/256 (58%), Gaps = 14/256 (5%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L EA++ A LE+ G GG E+ +A L+RMY R+AE R + + +E E Sbjct: 168 QLALLPRDEANARPAILEIRPGTGGEEAALFAADLMRMYQRYAEARGWVFDVIEEQQSEL 227 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 GI+ + IKG + LK E GVHR+ R+ +S R HTS +++ V P +D ++++ Sbjct: 228 GGIRELVVHIKGEGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAED-VDVQ 286 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RIDT R+SGAGGQHVNTTDSAVRITHIP+G+VV E+SQH+N+ A +L++ Sbjct: 287 INPNDLRIDTMRSSGAGGQHVNTTDSAVRITHIPSGIVV-TSSEKSQHRNREIAMQVLKS 345 Query: 283 KLYELELQKRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +L+++E + + A +G ++E +IR+Y P + D R N+ Sbjct: 346 RLFDMERSRVDSERSANRAAQVGSGDRSE-----RIRTYNF-PQGRMTDHRINLTLYKLE 399 Query: 337 DVLDGDLDDFMKATLA 352 V+ GDLD+ + A A Sbjct: 400 QVMGGDLDEVIDALTA 415 >gi|217977729|ref|YP_002361876.1| peptide chain release factor 1 [Methylocella silvestris BL2] gi|254790890|sp|B8EI32|RF1_METSB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|217503105|gb|ACK50514.1| peptide chain release factor 1 [Methylocella silvestris BL2] Length = 360 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 98/242 (40%), Positives = 144/242 (59%), Gaps = 8/242 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LEV AG GG E+ +A L RMY R+AE + + E + ++G G K Sbjct: 105 ADERSAILEVRAGTGGDEAALFAGDLFRMYQRYAESKGWSVEIISANEGAAGGFKEIIAE 164 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E G HR+ R+ ++ R HTS +++ V P + +++EI+E+D +ID Sbjct: 165 IAGRGVFAKLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAQE-VDVEINEADLKID 223 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RA GAGGQHVN T+SA+RITHIPTG +V Q ERSQHKN+A+A +LR+++Y+ + QK Sbjct: 224 TMRAQGAGGQHVNKTESAIRITHIPTGTIVFVQDERSQHKNRARAMALLRSRIYDEQRQK 283 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 + A ++++G G +IR+Y P V D R N+ V+ G+ LD+ + Sbjct: 284 LD--AERAADRRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDKVITGEALDEVI 340 Query: 348 KA 349 A Sbjct: 341 DA 342 >gi|94502363|ref|ZP_01308828.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833646|ref|YP_001597842.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS] gi|94451077|gb|EAT14037.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206135|gb|ABS30445.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS] Length = 355 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 106/287 (36%), Positives = 163/287 (56%), Gaps = 16/287 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLE A+ E ++L+ LE K+ E LL ++N+ +E+ AG GG E+ Sbjct: 79 LLEFAIFEKKKNLLE----------LEFLIKKIEYLLKKNNNTNNVLMELRAGTGGDEAC 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + + RMYT + ++ +K E L + G G K + I+G N YG LK E GVHR+ Sbjct: 129 IFVENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ + P D + I I SD + +T+RASGAGGQHVN T+SA+R Sbjct: 189 RVPSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTESAIR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG++ +CQ+ERSQHKN +A +LRA++Y+ EL+ + E + + K+ I G Sbjct: 249 LTHIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNE--KLSKERKSLISTGDR 306 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N ++G +++ + A ++K Sbjct: 307 SAKIRTYNY-PQGRVTDHRINKSIYYLDKFMNGKINEMITALKILEK 352 >gi|88803826|ref|ZP_01119349.1| peptide chain release factor 1 [Polaribacter irgensii 23-P] gi|88780354|gb|EAR11536.1| peptide chain release factor 1 [Polaribacter irgensii 23-P] Length = 358 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 110/306 (35%), Positives = 172/306 (56%), Gaps = 11/306 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNL-----ILLELALEEDDCSILQETSDNLQRI-KLE 98 LM+E + L N + E Q L DN+ IL E + E + E + RI KLE Sbjct: 34 LMKEYKDLGNVVEKGDEYQ-ALIDNIEEAKEILAEGSDAEMNEMAKSEIDEANSRIPKLE 92 Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 E + F + + DS +A +E+ AG GG E+ +A L RMY+++ E + +K ++ Sbjct: 93 EEIR-FLLIPTDPEDSKNAVVELRAGTGGDEASIFAGDLFRMYSKYCESKGWKVATVDYS 151 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G G K + G + YG LK E GVHR+ R+ ++ R HTS ++ V+P ++ Sbjct: 152 EGTNGGFKEIQFEVNGADVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATCMVFPEAEE- 210 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 ++EI+ D RID + +SG GGQ VNTT SAVR+TH+PTG+V QCQ ++SQHKNK +A+ Sbjct: 211 FDVEINPKDVRIDFFCSSGPGGQSVNTTYSAVRLTHVPTGLVAQCQDQKSQHKNKEKAFK 270 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +LR++LY++EL K+ + S G +IR+Y + V D R + + Sbjct: 271 VLRSRLYDMELAKKNAEDALKRGSMVSSGDRSAKIRTYNYAQGR-VTDHRIGLSLYDLPN 329 Query: 338 VLDGDL 343 +++GD+ Sbjct: 330 IMNGDI 335 >gi|326332906|ref|ZP_08199163.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1] gi|325949264|gb|EGD41347.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1] Length = 359 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 103/247 (41%), Positives = 147/247 (59%), Gaps = 10/247 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D DA LEV +G GG ES +A LLRMYTR+AE++ +K E L+ + + G KS T+ + Sbjct: 102 DDKDAILEVKSGEGGEESALFAGDLLRMYTRYAERQGWKLEFLDATESDLGGYKSVTVAV 161 Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K G Y LK E GVHR+ R+ +S R HTS + + V P + +++EI++ Sbjct: 162 KAKGNPEPGRAPYALLKFEGGVHRVQRVPVTESQGRVHTSAAGVLVVPEAE-PVDVEIND 220 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITHIPTG+VV Q E+SQ +NK QA +LR++L Sbjct: 221 NDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVSMQNEKSQLQNKEQAMRVLRSRLL 280 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + A+ S+ + +IR+Y P + D RT + + VLDGDL+ Sbjct: 281 QAAQDAADAEASDARRSQVRTVDRSERIRTYNF-PENRISDHRTGYKSYNLDQVLDGDLE 339 Query: 345 DFMKATL 351 + + + Sbjct: 340 PVIGSAV 346 >gi|254382315|ref|ZP_04997675.1| peptide chain release factor 1 [Streptomyces sp. Mg1] gi|194341220|gb|EDX22186.1| peptide chain release factor 1 [Streptomyces sp. Mg1] Length = 359 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 104/251 (41%), Positives = 147/251 (58%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LEV AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVLLEVKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVS 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 ++ G + LK E GVHR+ R+ +S R HTS + + V P ++ +E+ Sbjct: 159 VRTKGGNGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VEV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D RID YR+SG GGQ VNTTDSAVRITHIPTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EINMNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L + +E +++ S + +IR+Y P + D RT + + VLD Sbjct: 278 SRLLAAAQEAAEQEASDVRRSQVRSVDRSEKIRTYNY-PENRISDHRTGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 GDLD ++A + Sbjct: 337 GDLDSIIQACV 347 >gi|50842731|ref|YP_055958.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202] gi|289425142|ref|ZP_06426919.1| peptide chain release factor 1 [Propionibacterium acnes SK187] gi|295130812|ref|YP_003581475.1| peptide chain release factor 1 [Propionibacterium acnes SK137] gi|50840333|gb|AAT83000.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202] gi|289154120|gb|EFD02808.1| peptide chain release factor 1 [Propionibacterium acnes SK187] gi|291375831|gb|ADD99685.1| peptide chain release factor 1 [Propionibacterium acnes SK137] gi|313764216|gb|EFS35580.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA1] gi|313772062|gb|EFS38028.1| peptide chain release factor 1 [Propionibacterium acnes HL074PA1] gi|313791908|gb|EFS40009.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA1] gi|313810262|gb|EFS47983.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA1] gi|313812711|gb|EFS50425.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA1] gi|313816309|gb|EFS54023.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA1] gi|313818790|gb|EFS56504.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA2] gi|313820562|gb|EFS58276.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA1] gi|313822633|gb|EFS60347.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA2] gi|313827397|gb|EFS65111.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA2] gi|313830592|gb|EFS68306.1| peptide chain release factor 1 [Propionibacterium acnes HL007PA1] gi|313833628|gb|EFS71342.1| peptide chain release factor 1 [Propionibacterium acnes HL056PA1] gi|313838323|gb|EFS76037.1| peptide chain release factor 1 [Propionibacterium acnes HL086PA1] gi|314915694|gb|EFS79525.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA4] gi|314917937|gb|EFS81768.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA1] gi|314920320|gb|EFS84151.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA3] gi|314924927|gb|EFS88758.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA3] gi|314931540|gb|EFS95371.1| peptide chain release factor 1 [Propionibacterium acnes HL067PA1] gi|314957925|gb|EFT02028.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA1] gi|314960548|gb|EFT04650.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA2] gi|314962564|gb|EFT06664.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA1] gi|314967573|gb|EFT11672.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA1] gi|314973593|gb|EFT17689.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA1] gi|314975815|gb|EFT19910.1| peptide chain release factor 1 [Propionibacterium acnes HL045PA1] gi|314983706|gb|EFT27798.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA1] gi|314987887|gb|EFT31978.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA2] gi|314989698|gb|EFT33789.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA3] gi|315084734|gb|EFT56710.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA2] gi|315085418|gb|EFT57394.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA3] gi|315095866|gb|EFT67842.1| peptide chain release factor 1 [Propionibacterium acnes HL038PA1] gi|315098771|gb|EFT70747.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA2] gi|315101459|gb|EFT73435.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA1] gi|315105832|gb|EFT77808.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA1] gi|315108751|gb|EFT80727.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA2] gi|327326418|gb|EGE68208.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA2] gi|327329874|gb|EGE71628.1| peptide chain release factor 1 [Propionibacterium acnes HL097PA1] gi|327445686|gb|EGE92340.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA2] gi|327448330|gb|EGE94984.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA1] gi|327450545|gb|EGE97199.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA3] gi|327453373|gb|EGF00028.1| peptide chain release factor 1 [Propionibacterium acnes HL092PA1] gi|328753199|gb|EGF66815.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA2] gi|328753962|gb|EGF67578.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA1] gi|328754695|gb|EGF68311.1| peptide chain release factor 1 [Propionibacterium acnes HL020PA1] gi|328760891|gb|EGF74456.1| peptide chain release factor 1 [Propionibacterium acnes HL099PA1] Length = 361 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 120/347 (34%), Positives = 186/347 (53%), Gaps = 28/347 (8%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D +RL + T+ D + + L + L + +S + D+L ++ E Sbjct: 10 DEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 EED L+ ++ L R +L++ + LL S D DA +E+H+G GG ES +A Sbjct: 69 TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191 LLRMYTR+AE+ + L + G ++ + + G P+ AYG+LK E GVHR+ Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302 +TH+PTG+V CQ ERSQ +NKA+A MLRAK+ E + +R+++ + S+ Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +R+Y P + D R + +L GDL D + A Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342 >gi|194335257|ref|YP_002017051.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme BU-1] gi|238693362|sp|B4SAR5|RF1_PELPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194307734|gb|ACF42434.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme BU-1] Length = 357 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 95/241 (39%), Positives = 145/241 (60%), Gaps = 4/241 (1%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSAT 169 EADS + +E+ AG GG E+ +A L RMY R+AE + ++ E L ++ G + T Sbjct: 104 EADSRNVIIEIRAGTGGEEAALFAADLTRMYQRYAEHQGWQCETLHFNESSVPGGFREIT 163 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 L + G + YG +K E GVHR+ R+ ++ R HTS S+ V P ++ +++EI D R Sbjct: 164 LSVNGHDVYGTMKYESGVHRVQRVPDTETQGRIHTSAVSVAVLPEAEE-VDVEIRREDLR 222 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 DTYR+ G GGQ+VN ++AVRITH+PTG+V CQ++RSQ +NK +A MLR KLY+++L Sbjct: 223 FDTYRSGGKGGQNVNKVETAVRITHMPTGIVSACQEQRSQLQNKERAMQMLRTKLYDIQL 282 Query: 290 -QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +++++ A++ S T +IR+Y P V D R + +L GDL D + Sbjct: 283 AEQQQQRADLRRSMVTTGDRSAKIRTYNY-PQSRVTDHRIAFTSHALPQILQGDLQDIIN 341 Query: 349 A 349 A Sbjct: 342 A 342 >gi|126663551|ref|ZP_01734548.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38] gi|126624499|gb|EAZ95190.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38] Length = 357 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 96/264 (36%), Positives = 154/264 (58%), Gaps = 6/264 (2%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 L E D L +++ E+ +F + D+ + +E+ AG GG E+ +A L RMYT++ Sbjct: 81 LDEAKDRLPQLEEEI---KFMLIPKDPEDAKNVMVEIRAGTGGDEASIFAGDLFRMYTKY 137 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 E R ++T ++I +G G K + G + YG LK E GVHR+ R+ ++ R HT Sbjct: 138 CEARGWRTSVVDISEGTSGGFKEVIFEVTGEDVYGTLKFEAGVHRVQRVPQTETQGRVHT 197 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S +++ V P ++ +++I +D R+D + +SG GGQ VNTT SAVR+THIPTG+V QCQ Sbjct: 198 SAATVMVLPEAEE-FDVQIDMNDVRVDFFCSSGPGGQSVNTTKSAVRLTHIPTGLVAQCQ 256 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMV 323 ++SQHKNK +A ++LR++LYE EL ++ SS+ G +IR+Y + V Sbjct: 257 DQKSQHKNKDKALDVLRSRLYEKELAIKQAEDATKRSSQVSSGDRSAKIRTYNYSQGR-V 315 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFM 347 D R ++ V++G + F+ Sbjct: 316 TDHRIGLDVFDMDGVMNGKIQKFV 339 >gi|294501881|ref|YP_003565581.1| peptide chain release factor 1 [Bacillus megaterium QM B1551] gi|294351818|gb|ADE72147.1| peptide chain release factor 1 [Bacillus megaterium QM B1551] Length = 355 Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 118/345 (34%), Positives = 184/345 (53%), Gaps = 12/345 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +FD AV+ R LN DP + N + + +E+ + ++ +E +D +L + Sbjct: 1 MFDRLEAVEARYEKLNELLSDPEIVNNPSKLREYSKEQSDIQQTVAAYQEYKDVKEQLSE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ D +++E L+ + E VE + + D + +EV AGG Sbjct: 61 AKTMLEDKLDADMRDMVKEEIAELETQQEELVEKLRILLIPKDPNDDKNVIMEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E G K +I G AY +K E G Sbjct: 121 DEAALFAANLYRMYSRFAESQGWKTEVMEATTTGVGGYKEIIFMINGKGAYSKMKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P ++ +E++I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PT VV CQ E+SQ KNK +A +LRA++Y+ + Q RE A + K +G Sbjct: 240 SAVRLTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARVYD-KFQ-REAQAEYDATRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P V D R + +L+G LD+ + A Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEIIDA 341 >gi|293977757|ref|YP_003543187.1| bacterial peptide chain release factor 1 [Candidatus Sulcia muelleri DMIN] gi|292667688|gb|ADE35323.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Sulcia muelleri DMIN] Length = 352 Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 105/281 (37%), Positives = 160/281 (56%), Gaps = 16/281 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLE A+ E ++L+ LE K+ E LL ++N+ +E+ AG GG E+ Sbjct: 79 LLEFAIFEKKKNLLE----------LEFLIKKIEYLLKKNNNTNNVLMELRAGTGGDEAC 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + + RMYT + ++ +K E L + G G K + I+G N YG LK E GVHR+ Sbjct: 129 IFVENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ + P D + I I SD + +T+RASGAGGQHVN T+SA+R Sbjct: 189 RVPSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTESAIR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG++ +CQ+ERSQHKN +A +LRA++Y+ EL+ + E + + K+ I G Sbjct: 249 LTHIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNE--KLSKERKSLISTGDR 306 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R N ++G +++ + A Sbjct: 307 SAKIRTYNY-PQGRVTDHRINKSIYYLDKFMNGKINEMITA 346 >gi|89070966|ref|ZP_01158192.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516] gi|89043473|gb|EAR49687.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516] Length = 351 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 98/244 (40%), Positives = 148/244 (60%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A +E+ G GG E+ +A LLRMY R+A+ + + E ++ E GI+ T Sbjct: 101 ADARPAMIEIRPGTGGEEAALFAADLLRMYQRYADAKGWSFEIIDEQATELGGIRELTAR 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + LK E GVHR+ R+ +S R HTS +++ V P D ++I+I+ +D RID Sbjct: 161 VAGDGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAAD-VDIDIAPADIRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+ +L+++E Q+ Sbjct: 220 TMRASGAGGQHVNTTDSAVRITHLPTGLVV-TSSEKSQHRNREIAMQVLKTRLFDMERQR 278 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + K ++G G +IR+Y P + D R N+ ++L GDLD+ + Sbjct: 279 ASD--ERSAARKAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLEEILGGDLDETID 335 Query: 349 ATLA 352 A +A Sbjct: 336 ALIA 339 >gi|317487895|ref|ZP_07946487.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA] gi|325830623|ref|ZP_08164044.1| peptide chain release factor 1 [Eggerthella sp. HGA1] gi|316913021|gb|EFV34538.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA] gi|325487369|gb|EGC89811.1| peptide chain release factor 1 [Eggerthella sp. HGA1] Length = 357 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 104/253 (41%), Positives = 146/253 (57%), Gaps = 7/253 (2%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F + + AD D +E+ A AGG E+ +A L +MY R+A + +KTE +++ E Sbjct: 98 KFMLIPADPADDKDIIVEIRAAAGGDEAAIFAGELYKMYERFASAQGWKTETMDMSASEA 157 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K +KG + Y +K E GVHR+ R+ +S R HTS +++ V P D+ +E+E Sbjct: 158 GGFKEIQFKVKGDHVYSVMKFESGVHRVQRVPKTESQGRIHTSTATVAVLPEADE-VEVE 216 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+E+D RID YRA G GGQ VNTTDSAVRITH+P+G+VVQ Q ++SQ +NK A +LRA Sbjct: 217 INENDLRIDVYRAGGPGGQCVNTTDSAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRA 276 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 +LYE L E+ A G +IG G +IR+Y P V D R T +L Sbjct: 277 RLYEKMLA--EQQAAEGAKRLAQIGSGDRSEKIRTYN-GPQDRVTDHRIGFNGTYNGVLL 333 Query: 340 DGDLDDFMKATLA 352 L D + A A Sbjct: 334 GDGLGDVITALQA 346 >gi|314955551|gb|EFS99954.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA1] Length = 361 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 120/347 (34%), Positives = 186/347 (53%), Gaps = 28/347 (8%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D +RL + T+ D + + L + L + +S + D+L ++ E Sbjct: 10 DEVRRRLRDIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 EED L+ ++ L R +L++ + LL S D DA +E+H+G GG ES +A Sbjct: 69 TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191 LLRMYTR+AE+ + L + G ++ + + G P+ AYG+LK E GVHR+ Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302 +TH+PTG+V CQ ERSQ +NKA+A MLRAK+ E + +R+++ + S+ Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +R+Y P + D R + +L GDL D + A Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342 >gi|300781422|ref|ZP_07091276.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC 33030] gi|300533129|gb|EFK54190.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC 33030] Length = 360 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 152/245 (62%), Gaps = 7/245 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D++D +E+ AGAGG E+ +A L RMY ++AEK + L++ + + G+K T+ Sbjct: 103 EHDADDVIMEIKAGAGGEEAALFAGDLARMYQKYAEKAGLSWDVLDLSESDLGGVKDMTV 162 Query: 171 LIKGPN-----AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 +K N A+ LK E GVHR+ RI +S R TS + + VYP ++ ++I E Sbjct: 163 AVKAKNPSRDGAWSMLKFEGGVHRVQRIPVTESQGRIQTSAAGVLVYPEPEEVEAVDIDE 222 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +N+A+A +L+A+L Sbjct: 223 KDLRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLQARLD 282 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +LE +K E A G +S+ + +IR+Y P + D R N + + VLDG++D Sbjct: 283 QLEREKAEAEAAEGRASQVRTMDRSERIRTYNW-PENRISDHRINYKSNNLDAVLDGNMD 341 Query: 345 DFMKA 349 D + A Sbjct: 342 DIITA 346 >gi|257791638|ref|YP_003182244.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243] gi|257475535|gb|ACV55855.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243] Length = 352 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 104/253 (41%), Positives = 146/253 (57%), Gaps = 7/253 (2%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F + + AD D +E+ A AGG E+ +A L +MY R+A + +KTE +++ E Sbjct: 93 KFMLIPADPADDKDIIVEIRAAAGGDEAAIFAGELYKMYERFASAQGWKTETMDMSASEA 152 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K +KG + Y +K E GVHR+ R+ +S R HTS +++ V P D+ +E+E Sbjct: 153 GGFKEIQFKVKGDHVYSVMKFESGVHRVQRVPKTESQGRIHTSTATVAVLPEADE-VEVE 211 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+E+D RID YRA G GGQ VNTTDSAVRITH+P+G+VVQ Q ++SQ +NK A +LRA Sbjct: 212 INENDLRIDVYRAGGPGGQCVNTTDSAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRA 271 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 +LYE L E+ A G +IG G +IR+Y P V D R T +L Sbjct: 272 RLYEKMLA--EQQAAEGAKRLAQIGSGDRSEKIRTYN-GPQDRVTDHRIGFNGTYNGVLL 328 Query: 340 DGDLDDFMKATLA 352 L D + A A Sbjct: 329 GDGLGDVITALQA 341 >gi|85713812|ref|ZP_01044802.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A] gi|85699716|gb|EAQ37583.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A] Length = 358 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 107/280 (38%), Positives = 152/280 (54%), Gaps = 24/280 (8%) Query: 81 DCSILQETSDNLQRIKLEVEYKQFES------------LLSGEA-DSNDAYLEVHAGAGG 127 D I +D R E E E+ LL +A D + LEV AG GG Sbjct: 61 DAMIADPATDAEMRAMAEAERPALEARNNELMQQIRIALLPKDAMDERNVMLEVRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+A + +K E + +G G K ++G AY +K E GV Sbjct: 121 DEASLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAEVQGRGAYAKMKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P ++ +++EI D RI+T RA GAGGQHVN T+ Sbjct: 181 HRVQRVPDTEAQGRVHTSAATVAVLPEAEE-VDVEIKPDDLRIETMRAQGAGGQHVNKTE 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTE 305 SA+RITHIPTG+VV Q RSQHKN+A A N+LR+++Y++E Q+ N S+ K + Sbjct: 240 SAIRITHIPTGIVVNMQDSRSQHKNRASAMNILRSRIYDVERQR----INAARSADRKDQ 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +G G +IR+Y P V D R N+ V+ GD Sbjct: 296 VGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGD 334 >gi|302536943|ref|ZP_07289285.1| peptide chain release factor 1 [Streptomyces sp. C] gi|302445838|gb|EFL17654.1| peptide chain release factor 1 [Streptomyces sp. C] Length = 359 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 104/259 (40%), Positives = 147/259 (56%), Gaps = 29/259 (11%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVLLEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVS 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 ++ G + +K E GVHR+ R+ +S R HTS + + V P ++ +E+ Sbjct: 159 VRTKGGNGATEPGQGVWARMKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VEV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D RID YR+SG GGQ VNTTDSAVRITHIPTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EINMNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLYELEL---------QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 ++L Q+R ++ ++ S K IR+Y P + D RT + Sbjct: 278 SRLLAAAQEAAEQEASDQRRSQVRSVDRSEK--------IRTYNF-PENRISDHRTGFKA 328 Query: 333 TSPSDVLDGDLDDFMKATL 351 + VLDGDLD ++A + Sbjct: 329 YNLDQVLDGDLDSVIQACV 347 >gi|327454116|gb|EGF00771.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA2] Length = 361 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 120/347 (34%), Positives = 186/347 (53%), Gaps = 28/347 (8%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D +RL + T+ D + + L + L + +S + D+L ++ E Sbjct: 10 DEVRRRLREIETQLADSAVLSDSSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 EED L+ ++ L R +L++ + LL S D DA +E+H+G GG ES +A Sbjct: 69 TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191 LLRMYTR+AE+ + L + G ++ + + G P+ AYG+LK E GVHR+ Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302 +TH+PTG+V CQ ERSQ +NKA+A MLRAK+ E + +R+++ + S+ Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +R+Y P + D R + +L GDL D + A Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342 >gi|297202390|ref|ZP_06919787.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083] gi|197710089|gb|EDY54123.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083] Length = 358 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 102/251 (40%), Positives = 145/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + +K E GVHR+ R+ +S R HTS + + V P ++ +++ Sbjct: 159 VKTKGGNGATEPGQGVWARMKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D RID YR+SG GGQ VNTTDSAVRITHIPTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQALRILR 277 Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L ++ E A S+ + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEEAERNAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKSYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 GDLD ++A + Sbjct: 337 GDLDAVIQACV 347 >gi|313681233|ref|YP_004058971.1| bacterial peptide chain release factor 1 (brf-1) [Sulfuricurvum kujiense DSM 16994] gi|313154093|gb|ADR32771.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfuricurvum kujiense DSM 16994] Length = 355 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 101/250 (40%), Positives = 149/250 (59%), Gaps = 15/250 (6%) Query: 112 ADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 AD ND Y+E+ AG GG E+ + L Y R+A+ + +K E + + G K Sbjct: 100 ADPNDKRNIYIELRAGTGGDEAAIFVGDLFNAYVRYADVKGWKIELMSSSPSDAGGYKEI 159 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 LIKG Y LK E G HR+ R+ +S R HTS ++ V P VDD +E+ I+E+D Sbjct: 160 IALIKGEQVYSRLKYEAGTHRVQRVPATESQGRVHTSAITVAVMPEVDD-VEVTINENDL 218 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 +ID R+SG+GGQ VNTTDSAVRITH+PTG+VV Q E+SQHKNK +A +L+A++YE++ Sbjct: 219 KIDVMRSSGSGGQSVNTTDSAVRITHLPTGIVVTNQDEKSQHKNKDKAMKILKARIYEMQ 278 Query: 289 LQKREEIANIGESS--KTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +++ A + E S K ++G G +IR+Y P + D R N+ +++ G L Sbjct: 279 MEE----AKVKEMSERKEQVGTGDRSGRIRTYNY-PQNRISDHRINLTLYRLDEIMQGGL 333 Query: 344 -DDFMKATLA 352 DD ++ +A Sbjct: 334 MDDIIEPLIA 343 >gi|30425080|ref|NP_780583.1| peptide chain release factor 1-like, mitochondrial precursor [Mus musculus] gi|81874010|sp|Q8BJU9|RF1ML_MOUSE RecName: Full=Peptide chain release factor 1-like, mitochondrial; AltName: Full=Mitochondrial translational release factor 1-like; Flags: Precursor gi|26347595|dbj|BAC37446.1| unnamed protein product [Mus musculus] gi|74186873|dbj|BAE20502.1| unnamed protein product [Mus musculus] gi|148671619|gb|EDL03566.1| mitochondrial translational release factor 1-like [Mus musculus] Length = 373 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 112/279 (40%), Positives = 159/279 (56%), Gaps = 11/279 (3%) Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 E +D L E+ L + ++ Q SLL S E D +D LEV AG GG E+ + + Sbjct: 81 ENEDLKKLAESEIALCQKQITELKHQIISLLVPSEEMDGSDLILEVTAGVGGQEAMLFTS 140 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 + MY ++A +++ E LE E G++ A+ + GP AY +K E GVHR+ R+ Sbjct: 141 EMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASVGGPEAYRHMKFEGGVHRVQRVPK 200 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 + R HTS ++ + P + I++ I+ D RIDT RASGAGGQHVNTTDSAVRI H+ Sbjct: 201 TEKQGRIHTSTMTVAILPQPTE-IKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHL 259 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR--QI 312 PTG++ +CQQERSQ KN+ A LRA+LY + L+ EE A + K ++G GR +I Sbjct: 260 PTGIISECQQERSQLKNRELAMKKLRARLYSMHLE--EETAKRYNARKIQVGTKGRSEKI 317 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349 R+Y P V D R N + GD LDD +++ Sbjct: 318 RTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDDMIQS 355 >gi|209883257|ref|YP_002287114.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5] gi|229470351|sp|B6JA06|RF1_OLICO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|209871453|gb|ACI91249.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5] Length = 358 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 106/280 (37%), Positives = 164/280 (58%), Gaps = 18/280 (6%) Query: 76 ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133 A+ E + +LQE +NL Q+I++ +LL +A D + LEV AG GG E+ + Sbjct: 75 AMAESERPVLQERQENLEQQIRI--------ALLPKDAMDERNVVLEVRAGTGGDEASLF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMY R+A + +K E + +G G K ++G A+ LK E GVHR+ R+ Sbjct: 127 AGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIVAQVQGRGAFAKLKFESGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +++ R HTS +++ V P ++ I+I+I ++D RI+T RA GAGGQHVN T+SA+RIT Sbjct: 187 PDTEASGRIHTSAATVAVLPEAEE-IDIDIKDTDLRIETMRAQGAGGQHVNKTESAIRIT 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG+VV Q RSQHKN+A A N+LR+++ + E Q+ + + ++G G Sbjct: 246 HIPTGIVVMMQDSRSQHKNRASAMNILRSRILDAERQR--AASERSADRRGQVGSGDRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349 ++R+Y P V D R N+ V+ G+ L++ + A Sbjct: 304 RVRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALNELIDA 342 >gi|83859678|ref|ZP_00953198.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633] gi|83852037|gb|EAP89891.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633] Length = 357 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 121/317 (38%), Positives = 180/317 (56%), Gaps = 26/317 (8%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 A+ L R+ + A + I++ DR ++ELA EE QE L ++ E++ Sbjct: 48 ARELKTARESFEEAEAIIEDGSDR-----DMVELAEEE-----RQELKKRLPGLERELQL 97 Query: 102 KQFESLLSGEADSNDA--YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 LL + +DA LE+ AG GG E+ +A L RMY R+A +K + +E + Sbjct: 98 -----LLIPKDRDDDASIMLEIRAGTGGDEAALFAGDLFRMYERYASNHGWKVDVVEASE 152 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 E G K + G +G +K E GVHR+ R+ +S R HTS +++ V P +++ Sbjct: 153 AEVGGYKEIVASVSGKGVFGKMKFESGVHRVQRVPVTESGGRIHTSAATVAVLPE-PENV 211 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 EI+I + D RIDT RASGAGGQHVN T+SAVR+THIPTG+VV E+SQH+N+A A + Sbjct: 212 EIDIKDEDIRIDTMRASGAGGQHVNKTESAVRMTHIPTGIVV-VSSEKSQHQNRAIAMQV 270 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336 L+A+LYE E ++++E A E K ++G G +IR+Y P V D R N+ Sbjct: 271 LKARLYEKERREKDE-ARAAE-RKGQVGSGDRSERIRTYNF-PQGRVSDHRINLTLYKLD 327 Query: 337 DVLDGD-LDDFMKATLA 352 ++L GD LD+ + A L+ Sbjct: 328 EILSGDALDEVIDALLS 344 >gi|182677881|ref|YP_001832027.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica ATCC 9039] gi|238691232|sp|B2IHL7|RF1_BEII9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|182633764|gb|ACB94538.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica ATCC 9039] Length = 358 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 99/251 (39%), Positives = 150/251 (59%), Gaps = 9/251 (3%) Query: 106 SLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +LL +AD A LE+ AG GG E+ +A L RMY R+AE + + E L + +G G Sbjct: 98 ALLPKDADDEKSAILEIRAGTGGDEAALFAGDLFRMYQRYAEAKGWGVEILSVSEGTAGG 157 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K I G + LK E G HR+ R+ ++ R HTS +++ V P ++ +++EI+ Sbjct: 158 YKEIVAEITGKGVFAKLKFESGTHRVQRVPDTETQGRIHTSAATVAVLPQAEE-VDVEIN 216 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E+D +IDT RA GAGGQHVN T+SA+RITH+PTG V+ Q ERSQHKN+A+A ++LR+++ Sbjct: 217 EADLKIDTMRAQGAGGQHVNKTESAIRITHLPTGTVIFVQDERSQHKNRARAMSLLRSRI 276 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ + Q+ E A K ++G G +IR+Y P + D R N+ V+ G Sbjct: 277 YDAKRQQLE--AERAADRKAQVGSGDRSERIRTYNF-PQGRLTDHRINLTLYKLDKVMTG 333 Query: 342 D-LDDFMKATL 351 + LD+ + A + Sbjct: 334 EALDEVIDALI 344 >gi|313158318|gb|EFR57720.1| peptide chain release factor 1 [Alistipes sp. HGB5] Length = 361 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 97/238 (40%), Positives = 139/238 (58%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A +E+ G GG E+ +A LLRMYT++ E + ++ E DG G K L + Sbjct: 111 DSKNAIMEIRGGTGGDEAAIFAGDLLRMYTKYIESKGWRYEMTSFSDGAAGGYKEVVLKV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ ++EIS +D R D Sbjct: 171 TGQNVYGTLKYESGVHRVQRVPQTETQGRVHTSAASVAVLPEAEE-FDVEISMNDIRKDI 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + ASG GGQ VNTT SA+R+THIPTG+VVQCQ ++SQ KN +A+ LR +++ LE K Sbjct: 230 FCASGPGGQSVNTTYSAIRLTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKY 289 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + I KT + G +IR+Y P + D R N + S +DGD+ D + Sbjct: 290 --LDEIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDVI 344 >gi|281208935|gb|EFA83110.1| peptide chain release factor 1 [Polysphondylium pallidum PN500] Length = 463 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 111/308 (36%), Positives = 179/308 (58%), Gaps = 23/308 (7%) Query: 49 RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108 RQ++ N I IKE++ ++L++ EE ++ E + +E SLL Sbjct: 152 RQYV-NEIGNIKELK-------MMLDMEKEEASREMIIEDLKAMGEQLAALEKSLIYSLL 203 Query: 109 SGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 + D + +A +E+ AG GG E+Q +A+ + RMY +A + ++ E+L+I + G + Sbjct: 204 PADKDDDGNAIIEIRAGTGGGEAQLFAHEMFRMYEGYAATKGWRFESLDISYTDVGGCRE 263 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 A+ I G +G+LK E GVHR+ RI ++ R HTS +++ + P + ++I+I++ D Sbjct: 264 ASAAISGKGVFGFLKNESGVHRVQRIPDTETQGRIHTSTTTVAIMPEPKE-VDIKINDRD 322 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 +ID +R+SG GGQ VNTTDSAVRI H+PTG+ V Q ERSQ +NK++A +LRA+LYE+ Sbjct: 323 LKIDVFRSSGNGGQSVNTTDSAVRIVHLPTGITVSMQDERSQLQNKSKAMKVLRARLYEM 382 Query: 288 E---LQKR---EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 E LQ E + IG ++++E +IR+Y P V D R NI ++ G Sbjct: 383 ERVRLQTERSAERNSQIGGATRSE-----RIRTYNF-PQDRVTDHRVNITTNDIDAIMTG 436 Query: 342 D-LDDFMK 348 + L DF++ Sbjct: 437 ETLGDFIE 444 >gi|25027860|ref|NP_737914.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314] gi|259506251|ref|ZP_05749153.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314] gi|81749553|sp|Q8FQ31|RF1_COREF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|23493143|dbj|BAC18114.1| putative peptide chain release factor 1 [Corynebacterium efficiens YS-314] gi|259166155|gb|EEW50709.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314] Length = 358 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 102/251 (40%), Positives = 152/251 (60%), Gaps = 7/251 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D +D +E+ AGAGG E+ +A LLRMY ++A+K F E L+ + + G+K TL Sbjct: 101 EHDGDDIVMEIKAGAGGEEAALFAGDLLRMYQKYADKHGFIIEVLDSAESDLGGVKDITL 160 Query: 171 LIKG--PN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 I+ P+ A+ K E GVHR+ R+ +S R TS + + VYP D+ ++EI E Sbjct: 161 SIRSRQPSRDGAWSQFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDE 220 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 + R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +N+A+A +L A+L Sbjct: 221 KEIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLAARLQ 280 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 L+ ++ + A G +S+ + +IR+Y P + D R + + VL+G+LD Sbjct: 281 ALQKEEADAEAAEGRASQIRTMDRSERIRTYNW-PENRISDHRIGFKANNLDAVLNGELD 339 Query: 345 DFMKATLAIKK 355 D A A ++ Sbjct: 340 DLFTALRAAER 350 >gi|298373047|ref|ZP_06983037.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str. F0058] gi|298275951|gb|EFI17502.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str. F0058] Length = 360 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 97/234 (41%), Positives = 133/234 (56%), Gaps = 7/234 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A +E+ G GG E+ +A L +MY R+ E R +KTE +G G K + Sbjct: 110 DGKNAIVEIRGGTGGDEAAIFAGDLFKMYARYCESRGWKTEVTSFTEGTMGGYKEIIFSV 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ +S R HTS +++ V P ++ +IEI ESD R D Sbjct: 170 SGDNVYGTLKYESGVHRVQRVPATESQGRVHTSAATVAVLPEAEE-FDIEIKESDIRTDI 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + ASG GGQ VNTT SA+R+ HIPTG+ VQCQ E+SQ KNKA+A LR ++Y +E QK Sbjct: 229 FCASGHGGQSVNTTYSAIRLVHIPTGITVQCQDEKSQLKNKAKAMTELRTRIYNIEYQKY 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 I +I KT + G +IR+Y P + D R N + + GD+ Sbjct: 289 --IDDIASKRKTMVSSGDRSAKIRTYNY-PQGRITDHRINYTAYNLPAFVGGDI 339 >gi|227529623|ref|ZP_03959672.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540] gi|227350413|gb|EEJ40704.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540] Length = 362 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 122/356 (34%), Positives = 184/356 (51%), Gaps = 24/356 (6%) Query: 10 LGGLFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDR 65 + +FD AV R LN DP + + L +E L + + K++ Sbjct: 3 MAEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKKVTQT 62 Query: 66 LCDNLILLELALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLL--SGEADSNDAY 118 + D+ EL E DD + + T D L Q+ KLE K+ E LL D + Sbjct: 63 ISDDE---ELLRESDDPDLTELTKDELSSAKDQQAKLE---KELEILLIPKDPNDDKNII 116 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AGG E+ +A L MY +AE + +K E ++ + E G K L+I G Y Sbjct: 117 MEIRGAAGGDEASLFAADLYNMYLHYAENQGWKVEVVDKSETEVGGFKEIALMITGDKVY 176 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E G HR+ R+ +S R HTS +++ V P +D ++++I D R+D YR+SGA Sbjct: 177 SKLKFENGAHRVQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGA 235 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ QK E + Sbjct: 236 GGQHVNKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQK--EQSAY 293 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K IG G +IR+Y P V D R + ++ GDLD+ ++A + Sbjct: 294 DAKRKDAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMSGDLDEIIEALI 348 >gi|328885059|emb|CCA58298.1| Peptide chain release factor 1 [Streptomyces venezuelae ATCC 10712] Length = 358 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 102/251 (40%), Positives = 144/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ +E+ Sbjct: 159 VKTKGGNGATEPGQGVWARLKYEGGVHRVQRVPATESAGRIHTSAAGVLVTPEAEE-VEV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI +D RID YR+SG GGQ VNTTDSAVRITH+PTG+V CQ E+SQ +NK QA +LR Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L ++ E A S+ + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEEAESKAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 GDLD ++A + Sbjct: 337 GDLDAMIQACV 347 >gi|32491094|ref|NP_871348.1| hypothetical protein WGLp345 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|30173141|sp|Q8D2K9|RF1_WIGBR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|25166301|dbj|BAC24491.1| prfA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 364 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 96/239 (40%), Positives = 144/239 (60%), Gaps = 6/239 (2%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++E+ +G GG E+ + L RMY +++E + +KT+ + + E G K + I Sbjct: 116 NCFIEIRSGTGGKEASLFVRDLCRMYIKYSEIKNWKTDIINYSNSEHGGYKEVIIKICNK 175 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NAY LK E G HR+ RI +S R HTS +I V P + D +I SD RIDT+R+ Sbjct: 176 NAYNKLKFESGGHRVQRIPETESQGRIHTSTCTIAVMPEMLDFKLPKIKTSDLRIDTFRS 235 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+NTTDSA+RITHIPT +VV+CQ ERSQHKNK++A +L+++L L+ +++ Sbjct: 236 SGAGGQHINTTDSAIRITHIPTNIVVECQDERSQHKNKSKAMLVLKSRLQANLLKNKKQK 295 Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I K+ +G G +IR+Y P + D R N+ +V+DG+L+ + L Sbjct: 296 EEI--IRKSLLGSGDRSDRIRTYNF-PQGRITDHRINLTIYKIDEVMDGNLNILINPIL 351 >gi|91974579|ref|YP_567238.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB5] gi|119361592|sp|Q13F02|RF1_RHOPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91681035|gb|ABE37337.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas palustris BisB5] Length = 361 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 110/296 (37%), Positives = 167/296 (56%), Gaps = 9/296 (3%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSG 110 L A+ +E++D L D LLE + + + E D L + E+ + +LL Sbjct: 45 LVEAVKAYREVRDELGDVDALLEDPDTDSEMRAMAEAERDALDAHRAELIQEIRVALLPK 104 Query: 111 EA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 +A D + LE+ AG GG E+ +A L RMY ++A + + E + +G G K Sbjct: 105 DAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGSMGGFKEII 164 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 +KG A+ LK E GVHR+ R+ ++ R HTS +++ V P V++ ++++I D + Sbjct: 165 AEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEE-VDVDIKADDLK 223 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDT RA GAGGQHVN T+SA+RITH+PTG+VV Q RSQHKN+A A N+LR+++Y+ E Sbjct: 224 IDTMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAE- 282 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 Q+R + A E K ++G G +IR+Y P V D R N+ V+ G+ Sbjct: 283 QQRLDAARSAE-RKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGE 336 >gi|54023021|ref|YP_117263.1| peptide chain release factor 1 [Nocardia farcinica IFM 10152] gi|61214587|sp|Q5Z0Z2|RF1_NOCFA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54014529|dbj|BAD55899.1| putative peptide chain release factor 1 [Nocardia farcinica IFM 10152] Length = 356 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 120/309 (38%), Positives = 172/309 (55%), Gaps = 11/309 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T+ DP L + A+ + + L ++ ++++ D ELA DD S Sbjct: 17 LETQLADPTLHNDPSAARRVGKRFAELAPIMATYRKLESARADLTAARELAA--DDASFA 74 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E + L+R E+E + L + D +D LEV +G GG ES +A L RMY R+ Sbjct: 75 AEVPE-LERQVDELEQALADLLAPRDPHDGDDVVLEVKSGEGGEESALFAADLARMYMRY 133 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRLVRISPYDSN 199 AE+R ++ E L+ + G K ATL IK +A + K E GVHR+ R+ +S Sbjct: 134 AERRGWRVEVLDATVSDLGGYKEATLSIKSRDAARDGVWSRFKFEGGVHRVQRVPVTESQ 193 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS + + +YP D+ E++I ESD RID YR+SG GGQ VNTTDSAVRITH+PTG+ Sbjct: 194 GRIHTSAAGVLIYPEPDEVAEVQIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGI 253 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318 VV CQ ERSQ +NKA+A +L A+L L ++ E+ A G +S+ + +IR+Y Sbjct: 254 VVTCQNERSQLQNKARAMQVLAARLQALAEEQAEQEAAAGRASQIRTVDRSERIRTYNF- 312 Query: 319 PYQMVKDLR 327 P + D R Sbjct: 313 PENRITDHR 321 >gi|227548000|ref|ZP_03978049.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM 44291] gi|227079906|gb|EEI17869.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM 44291] Length = 357 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 98/245 (40%), Positives = 147/245 (60%), Gaps = 7/245 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D +D +E+ AGAGG E+ +A L RMY ++ EK E L++ + + G K T+ Sbjct: 101 EHDGDDIIMEIKAGAGGEEAALFAGDLARMYQKYCEKNGLSWEVLDLAESDLGGAKDMTV 160 Query: 171 LIKGP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 +K A+ LK E GVHR+ R+ +S R TS + ++V+P ++ ++I E Sbjct: 161 AVKSKTPSRDGAWSKLKFEGGVHRVQRVPVTESQGRIQTSAAGVYVFPEAEEVASVDIDE 220 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RID YR+SG GGQ VNTTDSAVRITH+PT +VV CQ ERSQ +N+A+A +L+A+L Sbjct: 221 KDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTNIVVTCQNERSQIQNRARAMQVLQARLD 280 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +LE +K + A G +S+ + +IR+Y P + D R N + + VLDG++D Sbjct: 281 QLEREKADAEAAEGRASQVRTMDRSERIRTYNW-PENRISDHRINYKANNLDSVLDGNMD 339 Query: 345 DFMKA 349 + + A Sbjct: 340 ELISA 344 >gi|114052078|ref|NP_001039843.1| peptide chain release factor 1-like, mitochondrial precursor [Bos taurus] gi|122135943|sp|Q2KI15|RF1ML_BOVIN RecName: Full=Peptide chain release factor 1-like, mitochondrial; AltName: Full=Mitochondrial translational release factor 1-like; Flags: Precursor gi|86826548|gb|AAI12807.1| Mitochondrial translational release factor 1-like [Bos taurus] Length = 380 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KNK A LRAKLY L+ Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQ 299 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329 L+ EE + + K +IG GR +IR+Y P V D R N Sbjct: 300 LE--EETSKRYNARKIQIGTKGRSEKIRTYNF-PQNRVTDHRIN 340 >gi|259503694|ref|ZP_05746596.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041] gi|259168326|gb|EEW52821.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041] Length = 362 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 105/285 (36%), Positives = 158/285 (55%), Gaps = 11/285 (3%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTE 129 E+ E DD + T D L K E K+ E LL D + +E+ AGG E Sbjct: 68 EMLRETDDPDLAAMTKDELAESKERQEQLEKELEVLLIPKDPNDDKNIIMEIRGAAGGDE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L MY +AEK+ +K E ++ + E G K L+I G N Y LK E G HR Sbjct: 128 ASLFAADLYNMYLHYAEKQGWKVEVVDKSETEVGGFKEIALMITGTNVYSKLKFENGAHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P +D ++++I D R+D YR+SGAGGQHVN T SA Sbjct: 188 VQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGAGGQHVNKTSSA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ QK + + + K IG G Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQNAYD--KKRKNAIGTG 304 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + ++ G+LD+ ++A + Sbjct: 305 DRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMSGELDEIIEALI 348 >gi|296483896|gb|DAA26011.1| peptide chain release factor 1-like, mitochondrial precursor [Bos taurus] Length = 380 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KNK A LRAKLY L+ Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQ 299 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329 L+ EE + + K +IG GR +IR+Y P V D R N Sbjct: 300 LE--EETSKRYNARKIQIGTKGRSEKIRTYNF-PQNRVTDHRIN 340 >gi|301165960|emb|CBW25534.1| peptide chain release factor 1 [Bacteriovorax marinus SJ] Length = 357 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 120/351 (34%), Positives = 190/351 (54%), Gaps = 19/351 (5%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD D ++R L K DP ++ E K + ER +L+ + KE +++ + + Sbjct: 3 MFDKLDAVIERFETLTEKLADPTIYDRQDEFKKISSERSNLEEVVVAYKEYRQMKEDIDE 62 Query: 69 NLILLELALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAG 126 +L+ +ED + +E ++N +I E+E + LL + D + +E+ AGAG Sbjct: 63 AKEILKNEKDEDMKEMAKEVIAENEPQIP-EMEERLTILLLPKDPLDDKNVMMEIRAGAG 121 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + + RMY+ + FK E + I +G+E GIK + G Y LK E G Sbjct: 122 GDEASIFVGDVYRMYSNYFRDLGFKVEQVSISEGDE-GIKEIIFSVSGEKVYSKLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ V P DD +E ++ +D RID YR+ GAGGQ VNTT Sbjct: 181 VHRVQRVPKTESQGRVHTSTITVAVMPETDD-VEFDLDMNDVRIDVYRSGGAGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KT 304 DSAVR+THIPTG VV Q ++SQ KNK +A +L+ ++Y+ LQ++ N E++ K Sbjct: 240 DSAVRVTHIPTGTVVANQDQKSQLKNKEKALRILKNRIYDKMLQEK----NAAEAAERKG 295 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G G +IR+Y P + D R + S +++GD+ A +A Sbjct: 296 LVGTGDRSERIRTYNF-PQGRLTDHRIGLTLYSLDKIIEGDMTPVTDALIA 345 >gi|296268873|ref|YP_003651505.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833] gi|296091660|gb|ADG87612.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833] Length = 350 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 126/348 (36%), Positives = 181/348 (52%), Gaps = 22/348 (6%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + D V+ + L K DP + + +A+ + L I+ +E+Q D Sbjct: 1 MNLDELVKEYADLEQKLADPAVHADQAKARKYGKRYAELTPIITTYRELQSVREDLEAAR 60 Query: 74 ELALEEDDCSI--------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 ELA E+ + + E D L+R+ + + D D +E+ AG Sbjct: 61 ELAREDPAFAEEAAELEAKIPELEDRLKRLLIPKDPN----------DGKDIIMEIKAGE 110 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-NAYGWLKGE 184 GG ES +A LLRMY R+AE+ +K E + E G K T+ IKG A+ LK E Sbjct: 111 GGEESALFAADLLRMYLRYAERLGYKAEIISAQPSELGGYKDVTISIKGKEGAWSRLKYE 170 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + VYP ++ I+++I +D RID +R+SG GGQ VN Sbjct: 171 GGVHRVQRVPVTESQGRIHTSAAGVLVYPEAEE-IDVQIDPNDLRIDVFRSSGPGGQSVN 229 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITHIPTGVVV CQ E+SQ +NK A +LRA+L L Q+ E A S+ Sbjct: 230 TTDSAVRITHIPTGVVVSCQNEKSQLQNKEAAMRILRARLLALAQQEAEAAAAAERRSQV 289 Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +IR+Y P + D R + + VLDGDLD ++A + Sbjct: 290 RTVDRSERIRTYNF-PENRISDHRVGYKAYNLDQVLDGDLDGVIQALI 336 >gi|309775307|ref|ZP_07670316.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium 3_1_53] gi|308916970|gb|EFP62701.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium 3_1_53] Length = 357 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/243 (39%), Positives = 144/243 (59%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS++A +E+ AGG E +A L RMY+++AE + +K E +E+ D E G + ++ Sbjct: 108 DSHNAIVEIRGAAGGDEGNIFAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG YG LK E G HR+ R+ +S R HTS +++ V P ++ + + +I +D ++T Sbjct: 168 KGDGVYGKLKFESGSHRVQRVPKTESQGRIHTSTATVLVTPEIE-AEDFDIDMNDLEVET 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQH+N TDSAVRI H PTG+VV+CQ RSQH+N+A A +R+++YE +K Sbjct: 227 MRASGAGGQHINKTDSAVRIVHKPTGIVVKCQDGRSQHENRATALMTIRSRVYEEHQRKL 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE + SK IG G +IR+Y P V D R +++G + D + A Sbjct: 287 EEEQGVERRSK--IGTGDRAEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGRMQDLLDA 343 Query: 350 TLA 352 L+ Sbjct: 344 LLS 346 >gi|170742857|ref|YP_001771512.1| peptide chain release factor 1 [Methylobacterium sp. 4-46] gi|226739116|sp|B0UAV4|RF1_METS4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|168197131|gb|ACA19078.1| peptide chain release factor 1 [Methylobacterium sp. 4-46] Length = 359 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 99/242 (40%), Positives = 146/242 (60%), Gaps = 8/242 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG E+ +A LLRMY R+A+ + +K E + G G + Sbjct: 106 ADEKSAILEIRAGTGGDEAALFAGDLLRMYARYADLKGWKIEVVSESPGTMGGYREVVAE 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KG + LK E G HR+ R+ ++ R HTS +++ V P ++ ++I ++E+D +ID Sbjct: 166 VKGRGVFARLKFESGAHRVQRVPETETQGRIHTSAATVAVLPEAEE-VDIHVNEADLKID 224 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RA GAGGQHVN T+SA+RITHIP+G+VV Q+ERSQHKN+A+A +LRA+LYE E + Sbjct: 225 TMRAQGAGGQHVNKTESAIRITHIPSGIVVFVQEERSQHKNRARAMAVLRARLYEQE--R 282 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 ++ A + ++G G +IR+Y P V D R N+ +VL G LD+ + Sbjct: 283 SQKDAARAADRRAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLEEVLAGTALDELV 341 Query: 348 KA 349 A Sbjct: 342 DA 343 >gi|148258772|ref|YP_001243357.1| peptide chain release factor 1 [Bradyrhizobium sp. BTAi1] gi|146410945|gb|ABQ39451.1| bacterial peptide chain release factor 1 (bRF-1) [Bradyrhizobium sp. BTAi1] Length = 361 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 101/249 (40%), Positives = 148/249 (59%), Gaps = 8/249 (3%) Query: 98 EVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 E+E K +LL +A D + LE+ AG GG E+ +A L RMY R+A + +K E + Sbjct: 92 ELEQKIRVALLPKDAMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVIS 151 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +G G K ++G A+ LK E GVHR+ R+ ++ R HTS +++ V P V+ Sbjct: 152 ASEGTVGGYKEIIAEVQGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVE 211 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + ++++I + D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV Q RSQHKN+A A Sbjct: 212 E-VDVDIKQDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASA 270 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 N+LR+++Y+ E QK + A K ++G G +IR+Y P V D R N+ Sbjct: 271 MNILRSRIYDAERQKVD--AARSAERKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 327 Query: 334 SPSDVLDGD 342 V+ G+ Sbjct: 328 KLPQVIAGE 336 >gi|297157199|gb|ADI06911.1| peptide chain release factor 1 [Streptomyces bingchenggensis BCW-1] Length = 356 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 102/248 (41%), Positives = 148/248 (59%), Gaps = 10/248 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LEV AG GG ES +A LLRMY R+AE+ +KTE ++ ++ + G K + Sbjct: 99 SDDKDVILEVKAGEGGEESALFAGDLLRMYLRYAERVGWKTEIIDANESDLGGYKDVQVA 158 Query: 172 IK-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ +E+EIS Sbjct: 159 VKAKSNAEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VEVEIS 217 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ++D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK QA +LR++L Sbjct: 218 QNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRL 277 Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ E A+ S+ + +IR+Y P + D R + + VLDG+L Sbjct: 278 LAAAQEEAEREASDARRSQVRTVDRSERIRTYNF-PENRISDHRVGFKAYNLDQVLDGEL 336 Query: 344 DDFMKATL 351 D ++A + Sbjct: 337 DPVIQACV 344 >gi|212550858|ref|YP_002309175.1| peptide chain release factor 1 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549096|dbj|BAG83764.1| peptide chain release factor 1 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 359 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 105/284 (36%), Positives = 157/284 (55%), Gaps = 20/284 (7%) Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLS-------------GEADSNDAYLEVHAGAG 126 D +IL++ SD + R + E ++ SLL+ D +A +E+ +G G Sbjct: 63 DAQTILEKESDKILREIAKEELEESTSLLNQLEKKIKLLLIPIDPQDGKNAIVEIRSGTG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L +MY+++ E + +K +G G K + G N Y LK E G Sbjct: 123 GDEASLFAGDLYKMYSKYCESKGWKIAVTSSSEGTIGGFKEIIFTVNGENVYSTLKYESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +++ V+P D ++IEI ESD R DT+ +SG GGQ VNTT Sbjct: 183 VHRVQRVPITETQGRIHTSAATVAVFPEAKD-VDIEIKESDIRTDTFCSSGPGGQSVNTT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SA+R+THIPTG+VVQCQ ERSQ KNK +A LR+++Y +E QK +I KT + Sbjct: 242 YSAIRLTHIPTGIVVQCQDERSQLKNKEKAMTELRSRIYNIEYQK--QIDETALKRKTMV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G +IR+Y P V D R N + L+G++ +F+ Sbjct: 300 STGDRSAKIRTYNY-PQGRVTDHRINYTTYNLLTFLEGNIQEFI 342 >gi|329929018|ref|ZP_08282820.1| peptide chain release factor 1 [Paenibacillus sp. HGF5] gi|328937007|gb|EGG33436.1| peptide chain release factor 1 [Paenibacillus sp. HGF5] Length = 355 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 94/244 (38%), Positives = 149/244 (61%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A+ L RMYTR+A+ + +K E ++++ + G K +I Sbjct: 106 DDKNVIIEIRGAAGGDEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E G HR+ RI +S R HTS S++ V P ++ ++IEI + D R+DT Sbjct: 166 NGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVAVMPEAEE-VDIEIHDKDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+THIPTG+V CQ +SQ+ NK +A +LRA+++ ++ ++ Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIF--DMMRQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE A K+++G G +IR+Y P V D R + V++G++++ + A Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSA 341 Query: 350 -TLA 352 TLA Sbjct: 342 LTLA 345 >gi|256390407|ref|YP_003111971.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928] gi|256356633|gb|ACU70130.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928] Length = 356 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 119/343 (34%), Positives = 182/343 (53%), Gaps = 13/343 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ + + L T+ DP + + A+ L + L +E + D++ E Sbjct: 6 DDLLAEYAELGTRLADPSVHADADVARKLGKRYAELGPIAETYREYTS-VSDDITAAEEL 64 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135 ED E LQ + +E + + L+ + D + LE+ G GG ES +A Sbjct: 65 SAEDPA--FGEEIPGLQERRTALEERLQKLLIPRDPMDEKNVILEIKGGEGGQESMLFAG 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGVHR 189 LLRMY R+AE++ +KTE LE + + G K + +KG + LK E GVHR Sbjct: 123 DLLRMYMRFAERQHWKTEILESTESDLGGYKDVQVAVKGRVNEAGEGVWARLKYEGGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS + + V P +D +E+EI+ +D RID +R+SG GGQ VNTTDSA Sbjct: 183 VQRVPVTESQGRIHTSAAGVLVLPEAED-VEVEINANDLRIDVFRSSGPGGQSVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE-EIANIGESSKTEIGW 308 VRITH+PTGVVV CQ E+SQ +NK A +LRA+L + ++ + E ++ +S + Sbjct: 242 VRITHLPTGVVVSCQNEKSQLQNKESAMRILRARLLAVAQEEADREASDTRKSQIRTMDR 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D R + + VLDGDLD ++A + Sbjct: 302 SERIRTYNF-PENRISDHRVGYKSYNLDQVLDGDLDAVIQACV 343 >gi|94676864|ref|YP_588739.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|119361509|sp|Q1LTH5|RF1_BAUCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|94220014|gb|ABF14173.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 366 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 98/243 (40%), Positives = 143/243 (58%), Gaps = 5/243 (2%) Query: 113 DSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D ND ++EV AG GG E+ +A L RMY+R+AE ++ + + G G K Sbjct: 108 DPNDERGCFIEVRAGTGGDEAALFAGDLFRMYSRYAEIHSWQIDVISASSGPHGGYKEII 167 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + NAYG LK E G HR+ RI +S R HTS ++ V P + + EIS D R Sbjct: 168 VKMSHDNAYGQLKFESGGHRVQRIPETESQGRIHTSSCTVAVIPDILHAELPEISPEDIR 227 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +DT+R+SGAGGQHVNTT+SA+RITH+PTG+VV+CQ ERSQHKNKA+A +L A+L E Sbjct: 228 VDTFRSSGAGGQHVNTTESAIRITHLPTGLVVECQDERSQHKNKAKAMAVLSARLRAAEA 287 Query: 290 QKREEIANIGESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 Q R++ + + G+ +IR+Y P + D R ++V++G L+ ++ Sbjct: 288 QCRQQEESCMRRNLLGSGYRSDRIRTYNF-PQGRITDHRIGFTTYRLNEVIEGKLEILLQ 346 Query: 349 ATL 351 + Sbjct: 347 PII 349 >gi|78778239|ref|YP_394554.1| peptide chain release factor 1 [Sulfurimonas denitrificans DSM 1251] gi|119361635|sp|Q30NW2|RF1_SULDN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78498779|gb|ABB45319.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas denitrificans DSM 1251] Length = 355 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 122/344 (35%), Positives = 181/344 (52%), Gaps = 36/344 (10%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-------SFIKEIQD--RLCDNL 70 + R + L P + ++ L +ER L+ + S I +I D + + Sbjct: 10 INRYNELGEMLSSPDITSDIKRMTTLSKERSSLEKIVEKAQEYKSVISQINDTKEMLYDA 69 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSND---AYLEVHAG 124 + E+A EE L+E LE++ E+ LL D ND +E+ AG Sbjct: 70 EMAEMAKEE-----LKE---------LEIQIPILENDIKLLLLPKDPNDDRNIIVELRAG 115 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ + L YTR+A+ + +K E L + G K LI+G Y LK E Sbjct: 116 AGGDEAAIFVGNLFEAYTRYADLKDWKVEILSSSPSDAGGYKEIIALIRGEQVYSRLKYE 175 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS ++ V P VDD +EI+I+E+D +ID R+SG GGQ VN Sbjct: 176 GGTHRVQRVPATESQGRVHTSAITVAVMPEVDD-VEIQINENDLKIDVMRSSGCGGQSVN 234 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+VV Q ++SQHKNK +A +L+A+LY+LE+Q E IA + Sbjct: 235 TTDSAVRITHLPTGLVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQ--EAIAKDSANRSA 292 Query: 305 EIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++G G +IR+Y P + D R + ++++ G L D Sbjct: 293 QVGTGDRSGRIRTYNY-PQNRMSDHRITLTLYRLAEIMQGGLMD 335 >gi|326790732|ref|YP_004308553.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427] gi|326541496|gb|ADZ83355.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427] Length = 357 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 107/271 (39%), Positives = 157/271 (57%), Gaps = 15/271 (5%) Query: 84 ILQETSDNLQRIK-LEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLR 139 + +E ++N +R++ LE E K LL D ND +E+ GAGG E+ +A L R Sbjct: 77 VKEELAENKKRVEPLENEIK----LLLLPKDPNDDKNVIMEIRGGAGGDEAALFAAELYR 132 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY +AE ++KTE + +++ G K ++KG AY LK E GVHR+ RI +S Sbjct: 133 MYCYYAESHRWKTELMSLNENGIGGFKEVIFMVKGQGAYSKLKYESGVHRVQRIPATESG 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V P ++ +++++ +D RID RASG GGQ VNTTDSAVR H+PTG+ Sbjct: 193 GRIHTSTVTVAVMPEAEE-LDVQLDMNDVRIDVCRASGNGGQCVNTTDSAVRALHVPTGL 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 +V CQ E+SQ KNK +A +LR +L++LE K A + K+ +G G +IR+Y Sbjct: 252 MVYCQDEKSQLKNKEKALKILRTRLFDLEQAKAH--AEMAAEKKSLVGTGDRSERIRTYN 309 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 P V D R + VLDGDL++ + Sbjct: 310 F-PQGRVTDHRVGLTLHKLEQVLDGDLEEII 339 >gi|261409698|ref|YP_003245939.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10] gi|261286161|gb|ACX68132.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10] Length = 355 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 94/244 (38%), Positives = 149/244 (61%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A+ L RMYTR+A+ + +K E ++++ + G K +I Sbjct: 106 DDKNVIIEIRGAAGGDEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E G HR+ RI +S R HTS S++ V P ++ ++IEI + D R+DT Sbjct: 166 NGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVAVMPEAEE-VDIEIHDKDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+THIPTG+V CQ +SQ+ NK +A +LRA+++ ++ ++ Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIF--DMMRQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE A K+++G G +IR+Y P V D R + V++G++++ + A Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSA 341 Query: 350 -TLA 352 TLA Sbjct: 342 LTLA 345 >gi|28378950|ref|NP_785842.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1] gi|254557155|ref|YP_003063572.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1] gi|300766721|ref|ZP_07076638.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181160|ref|YP_003925288.1| peptide chain release factor 1 [Lactobacillus plantarum subsp. plantarum ST-III] gi|32171522|sp|Q88UT2|RF1_LACPL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|28271787|emb|CAD64693.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1] gi|254046082|gb|ACT62875.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1] gi|300495821|gb|EFK30972.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046651|gb|ADN99194.1| peptide chain release factor 1 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 360 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 173/296 (58%), Gaps = 12/296 (4%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--- 116 KE+ ++ +N LL L+++ +++++ NL K ++E++ +LL D ND Sbjct: 55 KEVTSQIEENDELLHEKLDDEMNAMVKDDLKNLNAEKDQLEHEI--TLLMLPKDPNDDKN 112 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+H AGG E+ +A L MY+++AE++ ++ E + ++ E G K L+I G Sbjct: 113 IIMEIHGAAGGDEASLFAADLFNMYSKYAERQGWQVEVADRNETEVGGFKEIVLIISGDK 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 Y LK E G HR+ R+ +S R HTS +++ V P D ++I+I + D R D +R+S Sbjct: 173 VYSKLKYESGAHRVQRVPVTESAGRVHTSTATVGVMPEAQD-VDIDIDQKDIRTDVFRSS 231 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+A+A +LRA++Y+ Q RE+ Sbjct: 232 GAGGQHINKTSSAVRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRARVYDY-YQSREQNE 290 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E K+ +G G +IR+Y P V D R + V++G+LD+ + A Sbjct: 291 YDAE-RKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELDEVIDA 344 >gi|196229467|ref|ZP_03128332.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428] gi|196226699|gb|EDY21204.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428] Length = 360 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/248 (38%), Positives = 143/248 (57%), Gaps = 7/248 (2%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 QF L + DA +E+ G GG E+ +A L RMYTR+AE FK E LE GE Sbjct: 97 QFALLPPDPNEDRDAIVEIRGGTGGDEAALFAADLYRMYTRFAETHGFKLEPLEASVGEL 156 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G+K + G + L+ E GVHR+ R+ ++ R HTS +++ V P ++ +++E Sbjct: 157 GGMKEVIFKVTGDQVFRTLRYESGVHRVQRVPATEAQGRIHTSTATVAVLPEAEE-VDLE 215 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + + RI+ RA G GGQ VNTTDSAV++ HIPTG +V+CQ RSQ KNK +A +LR+ Sbjct: 216 LKADEIRIEVCRAGGPGGQGVNTTDSAVQVMHIPTGTIVRCQDGRSQQKNKEKALTILRS 275 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 +L LE+++REE K +IG G +IR+Y P V D R N+ + + Sbjct: 276 RL--LEVKQREEAEKYAAQRKGQIGTGDRSEKIRTYNF-PQNRVTDHRINLTLYNLDSFI 332 Query: 340 DGDLDDFM 347 +G++D+ + Sbjct: 333 EGNIDEMI 340 >gi|110598269|ref|ZP_01386544.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031] gi|110340077|gb|EAT58577.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031] Length = 357 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/245 (39%), Positives = 146/245 (59%), Gaps = 4/245 (1%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGI 165 L EADS + +E+ AG GG E+ +A +LRMY R+AEK+ +K E L ++ G Sbjct: 100 LPKDEADSRNVIVEIRAGTGGEEAALFAADILRMYQRYAEKQGWKCEVLHYNESSMPGGF 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 + TL + G + YG +K E GVHR+ R+ ++ R HTS S+ V P ++ +++EI Sbjct: 160 REITLEVSGHDVYGTMKYESGVHRVQRVPDTETQGRIHTSAVSVAVLPEAEE-VDVEIRR 218 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R DTYR+ G GGQ+VN ++AVRITH+PTG+V CQ+ERSQ +NK +A MLR KLY Sbjct: 219 EDLRFDTYRSGGKGGQNVNKVETAVRITHMPTGIVSACQEERSQLQNKERAMKMLRTKLY 278 Query: 286 ELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ L ++ ++ A++ S T +IR+Y P V D R + +L G++ Sbjct: 279 DILLAEQVQQRADLRRSMVTTGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQILQGEIQ 337 Query: 345 DFMKA 349 D + A Sbjct: 338 DIIDA 342 >gi|283768251|ref|ZP_06341164.1| peptide chain release factor 1 [Bulleidia extructa W1219] gi|283105128|gb|EFC06499.1| peptide chain release factor 1 [Bulleidia extructa W1219] Length = 358 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/243 (39%), Positives = 142/243 (58%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +E+ GAGG E +A L RMYTR+AE + +K + +E E G I Sbjct: 108 DDHDVIMEIRGGAGGDEGNIFAGDLYRMYTRYAESKGWKVQVMETSISEAGGFSQVIFSI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E GVHR+ R+ +S R HTS +++ P +++ +IEI +D I+T Sbjct: 168 KGNEVYRDLKWESGVHRVQRVPKTESQGRVHTSTATVLCQPEAEEA-DIEIDPADLTIET 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRI H+PTG+ V CQ+ RSQ +N+ A ++RA++YE ++R Sbjct: 227 HRASGAGGQHINKTDSAVRIVHVPTGITVNCQEGRSQIENRETAMRLIRARVYEEIKRQR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E A G + + +IG G +IR+Y P V D R + T +++G LD + Sbjct: 287 DEEA--GAARRAKIGTGDRSEKIRTYNY-PQNRVTDHRIGLTITQLDRIMEGKLDGIIAG 343 Query: 350 TLA 352 A Sbjct: 344 LQA 346 >gi|300025029|ref|YP_003757640.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC 51888] gi|299526850|gb|ADJ25319.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC 51888] Length = 359 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 150/245 (61%), Gaps = 11/245 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LEV AG GG E+ +A L RMY+R+A+ R +K E + + + G K Sbjct: 107 ADEKSAILEVRAGTGGDEAALFAADLFRMYSRYADLRGWKVEVISASENDLGGYKEIVAS 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ +++ R HTS +++ V P +D +EI+I D RID Sbjct: 167 ITGEGVFARLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAED-VEIDIKPDDIRID 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RA GAGGQHVN T+SAVRITH+PTG+VV E+SQH+N+ A N+L+A++YELE Sbjct: 226 TMRAGGAGGQHVNKTESAVRITHLPTGIVV-VSAEKSQHQNRRLAMNVLKARVYELE--- 281 Query: 292 REEIAN-IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346 RE+ A ++ K+++G G ++IR+Y P V D R N+ + +V+ G+ LD Sbjct: 282 REKAATERSDARKSQVGSGDRSQRIRTYNF-PQGRVTDHRINLTLYNLDEVMVGNGLDAL 340 Query: 347 MKATL 351 + A + Sbjct: 341 VDALI 345 >gi|320528629|ref|ZP_08029782.1| peptide chain release factor 1 [Solobacterium moorei F0204] gi|320130995|gb|EFW23572.1| peptide chain release factor 1 [Solobacterium moorei F0204] Length = 358 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/243 (39%), Positives = 144/243 (59%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +E+ GAGG E +A L RMY+++AE + +K + LE E G + Sbjct: 108 DDHDVIMEIRGGAGGDEGNIFAGDLYRMYSKYAESKGWKVQVLEASVSEAGGYTQIIFSV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG + Y LK E GVHR+ R+ ++ R HTS +++ P +D+ +IEI D I+T Sbjct: 168 KGTDVYKELKFESGVHRVQRVPKTETQGRIHTSTATVLCQPEAEDT-DIEIDPKDLTIET 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQH+N TDSAVRI H+PTG+ V CQ RSQ +N+ A ++RA++YE EL++ Sbjct: 227 HRASGAGGQHINKTDSAVRIVHVPTGITVNCQDGRSQIENRETAMRLIRARVYE-ELKRI 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E G+ + +IG G +IR+Y P V D R ++ T +++G LD ++ Sbjct: 286 QE-EEAGKIRRAKIGTGDRSEKIRTYNY-PQNRVTDHRISLTITQLDRIMEGKLDGVIEG 343 Query: 350 TLA 352 LA Sbjct: 344 LLA 346 >gi|89897680|ref|YP_521167.1| peptide chain release factor 1 [Desulfitobacterium hafniense Y51] gi|89337128|dbj|BAE86723.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 360 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 145/242 (59%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A L RMYT++AE++ ++TE L + G K LI Sbjct: 111 DDKNVIMEIRAGAGGEEAALFAGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLI 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS +++ V P ++ +++ I+ +D RID Sbjct: 171 EGQGAYSKLKFESGVHRVQRVPTTESGGRIHTSTTTVAVLPEAEE-VDVAINPNDLRIDI 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVRITH+PTG VV CQ E+SQ KNK +A +LRA+L LE + Sbjct: 230 FCSSGPGGQSVNTTQSAVRITHVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQE 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + ++++G G +IR+Y P V D R + +L G+LD+ + A Sbjct: 288 EAMGELASERRSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINA 346 Query: 350 TL 351 + Sbjct: 347 LI 348 >gi|284046083|ref|YP_003396423.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684] gi|283950304|gb|ADB53048.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684] Length = 349 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 117/333 (35%), Positives = 176/333 (52%), Gaps = 16/333 (4%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-- 79 R L + DP + + R+ + L+ A E + + D EL LEE Sbjct: 12 RFQELEAQMSDPEVIGDRQRYAETGRQYRDLEEAARLAAEWRRAVDDEAGAREL-LEEGG 70 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 DD + + +RI E + + AD + +E+ GAGG E+ +A L R Sbjct: 71 DDAEVRDMLARARERIDALDEEIRLAMVEKDPADEKNVIVEIRPGAGGDEAGLFAGDLYR 130 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 M TR+AE+R FKTEAL DG+ T +KG AY K E G HR+ R+ +S Sbjct: 131 MLTRYAERRGFKTEALSESDGQ------YTFAVKGEGAYSVFKFEGGTHRVQRVPETESQ 184 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ V P ++ +++E++++D ++D YR+SG GGQ VNTTDSAVRITH P+G+ Sbjct: 185 GRIHTSTATVAVLPEAEE-VDVEVNDNDLQVDVYRSSGPGGQSVNTTDSAVRITHKPSGI 243 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VV Q E+SQ +N+ +A +LRA+LYE L E+ A + + ++G G +IR+Y Sbjct: 244 VVSMQDEKSQLQNRDKAMRVLRARLYEAALA--EQQAELSATRLAQVGSGERAEKIRTYN 301 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P + D R + + L G+LDD A Sbjct: 302 F-PQGRITDHRIKLTVHNLDAALAGELDDVTDA 333 >gi|302811530|ref|XP_002987454.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii] gi|300144860|gb|EFJ11541.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii] Length = 505 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 119/313 (38%), Positives = 176/313 (56%), Gaps = 27/313 (8%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQ 103 + +E ++LD ++ IK ++ + + + L EL E +D + + S LQ EV Q Sbjct: 27 MNKELRNLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQ 86 Query: 104 FESLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + LL EADS GAGG E+ +A+ L +MY ++A ++ E L I Sbjct: 87 HDVLLELIPKDEADSR--------GAGGDEASIFASDLFKMYEKYAANNSWRFEVLSITT 138 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 + K A+ I G YG LK E GVHR+ R+ + R HTS +S+ + P ++ I Sbjct: 139 TDTRCYKEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANE-I 197 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 ++EI + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV Q ERSQHKNKA+A ++ Sbjct: 198 DVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSI 257 Query: 280 LRAKLYELELQK----REEIA--NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 L A+LYELE + R E+ IG S ++E +IR+Y P V D R + + Sbjct: 258 LYARLYELERSRAAASRSELRQDQIGSSDRSE-----RIRTYNF-PQGRVTDRRVGVTQH 311 Query: 334 SPSDVLDG-DLDD 345 + +++G D+D+ Sbjct: 312 AIEQIMEGIDVDN 324 >gi|311243768|ref|XP_003121185.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Sus scrofa] Length = 380 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S EAD ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEEADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ A LRAKLY L Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLH 299 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329 L+ EE + + K ++G GR +IR+Y P V D R N Sbjct: 300 LE--EETSKRYNARKVQVGTKGRSEKIRTYNF-PQNRVTDHRIN 340 >gi|297192053|ref|ZP_06909451.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC 25486] gi|197719497|gb|EDY63405.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC 25486] Length = 359 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/251 (41%), Positives = 144/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LEV AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEVKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ I++ Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-IDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI +D RID YR+SG GGQ VNTTDSAVRITH+PTG+V CQ E+SQ +NK QA +LR Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L ++ E A S+ + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEEAESKAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 GDLD ++A + Sbjct: 337 GDLDAVIQACV 347 >gi|110640072|ref|YP_680282.1| peptide chain release factor 1 [Cytophaga hutchinsonii ATCC 33406] gi|119361529|sp|Q11NS4|RF1_CYTH3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110282753|gb|ABG60939.1| bacterial peptide chain release factor 1 (bRF-1) [Cytophaga hutchinsonii ATCC 33406] Length = 359 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/324 (33%), Positives = 184/324 (56%), Gaps = 11/324 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALEEDDCSILQET 88 DP++ ++ L +E + L+ + K I D + + +L + + D + +E Sbjct: 21 DPNIMSDMKRYASLNKEYKELNKIVEVYAQYKNILDNIESSKKVLSVEKDPDFREMAKEE 80 Query: 89 SDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + L K ++E E L+ + DS + LE+ G GG E+ +A + RMY R+ ++ Sbjct: 81 LETLAVQKDDIELVIKELLIPKDPNDSKNIILEIRGGTGGDEASIFAGDIFRMYQRYCDR 140 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K E ++ +G G K I G + YG LK E GVHR+ R+ ++ R HTS + Sbjct: 141 MGWKMELIDATEGTSGGYKEIICGISGEDVYGKLKFESGVHRVQRVPATETQGRIHTSAA 200 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S+ V P V++ ++++++ +D R DT+ +SG GGQ VNTT SA+R+THIP+G VVQCQ E+ Sbjct: 201 SVAVLPEVEE-LDVQLNMNDIRKDTFCSSGPGGQSVNTTYSAIRLTHIPSGTVVQCQDEK 259 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQ KN +A +LR+++YE+E +K+++ +G+ + IG G +IR+Y P V Sbjct: 260 SQIKNFEKALKVLRSRIYEIEYKKQQD--ELGKERNSMIGSGDRSDKIRTYNY-PQSRVT 316 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMK 348 D R + V+DG++DDF++ Sbjct: 317 DHRIGHTVHNLPAVMDGNIDDFIE 340 >gi|167769908|ref|ZP_02441961.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM 17241] gi|167667899|gb|EDS12029.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM 17241] Length = 358 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 143/244 (58%), Gaps = 7/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +A +L RMYT +AE ++ E + ++ E G K I Sbjct: 107 DDKNVIVEIRGGAGGEEAALFAGVLYRMYTMYAEGLGWQCEVISANETELGGYKEICFSI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ ++ R HTS ++ V P ++ +E E+ D +ID Sbjct: 167 TGEGAYSRLKYESGVHRVQRVPETETQGRIHTSTVTVAVLPEAEE-VEFELDPRDLQIDV 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T SA+R+TH+PTG+VV+CQ ERSQ+KNK +A +LRA+L L+++ R Sbjct: 226 FRSSGAGGQHVNKTSSAIRVTHLPTGMVVECQDERSQYKNKDRALKVLRARL--LDIKVR 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ I + ++G G +IR+Y P V D R + VL+GDL + A Sbjct: 284 EQNDKIATERRLQVGTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSVLNGDLAELFDA 342 Query: 350 TLAI 353 + Sbjct: 343 LMTF 346 >gi|193216649|ref|YP_001999891.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1] gi|226739117|sp|B3PMD5|RF1_MYCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|193001972|gb|ACF07187.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1] Length = 355 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/252 (38%), Positives = 145/252 (57%), Gaps = 16/252 (6%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D+ + +E+ AGG E ++ L +MY ++ E FK + ++ G G Sbjct: 104 ENDNKNVIMEIRGAAGGDEGDIFSGDLFKMYQKFCEANDFKIKIVDSVYGTAGGYSRIVF 163 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 ++KG + LK E+GVHR+ R+ ++ R HTS +++ V P VDD ++IEI D + Sbjct: 164 IVKGEKVFSKLKFERGVHRVQRVPQTETQGRVHTSTATVTVLPEVDDDVKIEIRPEDIEV 223 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +R+SGAGGQ VNTTDSAVRITH TG++V Q ERSQ N+ A +L+AKLYE+E++ Sbjct: 224 DVFRSSGAGGQSVNTTDSAVRITHKKTGIIVTSQDERSQIMNRETALKILKAKLYEIEVK 283 Query: 291 KREE-------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 KREE +A G+ S+ +IR+Y P + D R S +V++G+L Sbjct: 284 KREEEEQGLRKLAGTGDRSE-------KIRTYNY-PQDRITDHRIGF-SLSLKNVMEGNL 334 Query: 344 DDFMKATLAIKK 355 D + A +A +K Sbjct: 335 DKIIDALIADEK 346 >gi|312869581|ref|ZP_07729732.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3] gi|311094867|gb|EFQ53160.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3] Length = 362 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/285 (37%), Positives = 159/285 (55%), Gaps = 11/285 (3%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEY--KQFESLL--SGEADSNDAYLEVHAGAGGTE 129 E+ E +D + T D L K E K+ E LL D + +E+ AGG E Sbjct: 68 EMLRETNDPDLAAMTKDELAESKDRQEQLEKELEVLLIPKDPNDDKNIIMEIRGAAGGDE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L MY +AEK+ +K E ++ ++ E G K L+I G N Y LK E G HR Sbjct: 128 ASLFAADLYNMYLHYAEKQGWKVEVVDKNETEVGGFKEIALMITGNNVYSKLKFENGAHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P +D ++++I D R+D YR+SGAGGQHVN T SA Sbjct: 188 VQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGAGGQHVNKTSSA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ QK E + E K IG G Sbjct: 247 VRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQK--EQSAYDEQRKNAIGTG 304 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + ++ G+LD+ ++A + Sbjct: 305 DRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGELDEIIEALI 348 >gi|75674575|ref|YP_316996.1| peptide chain release factor 1 [Nitrobacter winogradskyi Nb-255] gi|119361570|sp|Q3SVP7|RF1_NITWN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|74419445|gb|ABA03644.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter winogradskyi Nb-255] Length = 358 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/274 (38%), Positives = 157/274 (57%), Gaps = 21/274 (7%) Query: 76 ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133 A+ E + L+ +D L Q+I++ +LL +A D + LEV AG GG E+ + Sbjct: 75 AMAEAERPALEARNDELMQKIRV--------ALLPKDAMDERNVMLEVRAGTGGDEASLF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMY R+A + +K E + +G G K ++G AY +K E GVHR+ R+ Sbjct: 127 AGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAQVQGRGAYARMKFESGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P ++ ++++I D RI+T RA GAGGQHVN T+SA+RIT Sbjct: 187 PDTEAQGRVHTSAATVAVLPEAEE-VDVDIRPDDLRIETMRAQGAGGQHVNKTESAIRIT 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEIGWG-- 309 HIPTG+VV Q RSQHKN+A A N+LR+++Y+ E Q+ N S+ K ++G G Sbjct: 246 HIPTGIVVSMQDSRSQHKNRASAMNILRSRIYDAERQR----INAARSADRKDQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y P V D R N+ V+ GD Sbjct: 302 SERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGD 334 >gi|320354565|ref|YP_004195904.1| peptide chain release factor 1 (bRF-1) [Desulfobulbus propionicus DSM 2032] gi|320123067|gb|ADW18613.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfobulbus propionicus DSM 2032] Length = 356 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/284 (37%), Positives = 161/284 (56%), Gaps = 17/284 (5%) Query: 68 DNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D+ L+ELA E + ++++T + RI+L L D + +LE+ AG G Sbjct: 70 DDPDLVELAKAEIEELVVKQTELEQAIRIRL---------LPKDPNDDKNIFLEIRAGTG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + L RMY+R+AE + +K E + + G K L+ G Y LK E G Sbjct: 121 GDEAALFVADLFRMYSRYAEMQGWKVEVMSSNPIGIGGFKELIALVSGTQVYSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS ++ + P ++ +++ I ++ + D YR+SG GGQ VNTT Sbjct: 181 VHRVQRVPDTETQGRIHTSAVTVAIIPEAEE-VDLHIEPNELKFDVYRSSGPGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ E+SQHKNKA+A +LRA+L + Q+R + I E K+++ Sbjct: 240 DSAVRVTHLPTGLVVTCQDEKSQHKNKAKALQVLRARLLDKMEQERHD--RISEERKSQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G G +IR+Y P V D R N+ V+ G LDD + Sbjct: 298 GSGDRSERIRTYNF-PQGRVTDHRINLTLYRLDQVMAGMLDDII 340 >gi|119361535|sp|Q24ML9|RF1_DESHY RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 355 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 145/242 (59%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A L RMYT++AE++ ++TE L + G K LI Sbjct: 106 DDKNVIMEIRAGAGGEEAALFAGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS +++ V P ++ +++ I+ +D RID Sbjct: 166 EGQGAYSKLKFESGVHRVQRVPTTESGGRIHTSTTTVAVLPEAEE-VDVAINPNDLRIDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVRITH+PTG VV CQ E+SQ KNK +A +LRA+L LE + Sbjct: 225 FCSSGPGGQSVNTTQSAVRITHVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQE 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + ++++G G +IR+Y P V D R + +L G+LD+ + A Sbjct: 283 EAMGELASERRSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|269957243|ref|YP_003327032.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM 15894] gi|269305924|gb|ACZ31474.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM 15894] Length = 366 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 102/247 (41%), Positives = 144/247 (58%), Gaps = 9/247 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LE+ AG GG ES +A LLRMY R+AE++ + T+ LE D + G K + I Sbjct: 108 DGRDVILEIKAGEGGEESALFAGDLLRMYLRYAERKGWSTQVLEATDTDLGGYKDVQVAI 167 Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K G + LK E GVHR+ R+ ++ R HTS + + V+P VDD E+EI Sbjct: 168 KARSVNDPGDGVWAHLKYEGGVHRVQRVPVTETQGRIHTSAAGVLVFPEVDDPGEVEIDP 227 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +NK QA +LRA+L Sbjct: 228 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEQAMRVLRARLL 287 Query: 286 -ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + + A++ S + +IR+Y P + D RT + + VL GDL+ Sbjct: 288 AAQQEEAAAQAADLRRSQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLGGDLE 346 Query: 345 DFMKATL 351 +++ + Sbjct: 347 PVVRSAI 353 >gi|166795303|ref|NP_061914.3| peptide chain release factor 1-like, mitochondrial isoform a [Homo sapiens] gi|74753314|sp|Q9UGC7|RF1ML_HUMAN RecName: Full=Peptide chain release factor 1-like, mitochondrial; AltName: Full=Mitochondrial translational release factor 1-like; AltName: Full=mtRF1a; Flags: Precursor gi|6706658|emb|CAB65994.1| mitochondrial translational release factor 1-like [Homo sapiens] gi|158254756|dbj|BAF83351.1| unnamed protein product [Homo sapiens] Length = 380 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 108/246 (43%), Positives = 143/246 (58%), Gaps = 9/246 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 299 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343 L+ EEI + K +IG GR +IR+Y P V D R N + GD L Sbjct: 300 LE--EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLL 356 Query: 344 DDFMKA 349 D+ +++ Sbjct: 357 DELVQS 362 >gi|145629736|ref|ZP_01785532.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21] gi|144978073|gb|EDJ87852.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21] Length = 267 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 83/159 (52%), Positives = 109/159 (68%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE +++ E L ++ E+ G K +L+ Sbjct: 108 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + +S EI+ +D RIDT Sbjct: 168 SGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHK Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHK 266 >gi|309812101|ref|ZP_07705859.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185] gi|308433788|gb|EFP57662.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185] Length = 362 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/250 (41%), Positives = 147/250 (58%), Gaps = 10/250 (4%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D D LEV AG GG ES +A L+RMY R+AE+R +K E + D + G K A + Sbjct: 98 EDDERDVVLEVKAGEGGAESALFAGDLVRMYLRYAERRGWKAEIADATDADLGGYKDARI 157 Query: 171 LIKG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE- 222 ++ P W LK E GVHR+ R+ +S R HTS + + V P +D+ + Sbjct: 158 TVRAKGLPEPGEAPWARLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPDLDEDDDEIE 217 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 +D +ID YR+SG GGQ VNTTDSAVRITH+PTGVVV CQ E+SQ +NK A +L+A Sbjct: 218 FGPNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKESALRVLKA 277 Query: 283 KLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +L ++E++++E A+ S+ + +IR+Y P + D RT + + VLDG Sbjct: 278 RLRQMEIERKEAEASAARKSQVRTVDRSERIRTYNF-PENRIADHRTGYKSYNLDAVLDG 336 Query: 342 DLDDFMKATL 351 DLD +++ L Sbjct: 337 DLDAVVQSAL 346 >gi|295105808|emb|CBL03351.1| bacterial peptide chain release factor 1 (bRF-1) [Gordonibacter pamelaeae 7-10-1-b] Length = 357 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 102/256 (39%), Positives = 148/256 (57%), Gaps = 13/256 (5%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F + + AD D +E+ A AGG E+ +A L +MY R+A + +KTE +++ E Sbjct: 98 KFMLIPADPADDKDIIVEIRAAAGGDEAAIFAGDLYKMYERFAGAQGWKTETMDVSASEA 157 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K +KG + Y +K E GVHR+ R+ +S R HTS +++ V P D+ +E++ Sbjct: 158 GGFKEIQFKVKGDHVYSVMKFESGVHRVQRVPKTESQGRIHTSTATVAVLPEADE-VEVD 216 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+E+D RID YRA G GGQ VNTTDSAVRITH+P+G+VVQ Q ++SQ +NK A +LRA Sbjct: 217 INENDLRIDVYRAGGPGGQCVNTTDSAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRA 276 Query: 283 KLYELELQKR------EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +LYE L ++ E +A IG ++E +IR+Y P V D R T Sbjct: 277 RLYEKMLAEQQAAEGAERLAQIGSGDRSE-----KIRTYN-GPQDRVTDHRIGYNGTYNG 330 Query: 337 DVLDGDLDDFMKATLA 352 +L L D + A A Sbjct: 331 VLLGDGLGDVITALQA 346 >gi|225022790|ref|ZP_03711982.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii ATCC 33806] gi|305682007|ref|ZP_07404811.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC 14266] gi|224944397|gb|EEG25606.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii ATCC 33806] gi|305658480|gb|EFM47983.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC 14266] Length = 360 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 102/243 (41%), Positives = 147/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +E+ AGAGG E+ +A L+RMY R+A+K F TE L + + + G+K TL I Sbjct: 106 DGDDIVMEIKAGAGGEEAALFAGELVRMYQRYADKHGFSTEVLGLSESDLGGVKDMTLSI 165 Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K P+ A+ K E GVHR+ R+ +S R TS + + VYP D+ +EI + D Sbjct: 166 RSKQPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEIAAVEIDDKD 225 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +NKA+A +L A+L L Sbjct: 226 IRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNKARALQVLAARLQAL 285 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ E A G +++ + +IR+Y P + D R + + VL+GD++D Sbjct: 286 AEEQAEAEAAQGRAAQIRTLDRSERIRTYNW-PENRISDHRIGFKANNLDSVLNGDMEDL 344 Query: 347 MKA 349 A Sbjct: 345 FTA 347 >gi|15080204|gb|AAH11873.1| Mitochondrial translational release factor 1-like [Homo sapiens] gi|119568097|gb|EAW47712.1| mitochondrial translational release factor 1-like, isoform CRA_a [Homo sapiens] gi|119568101|gb|EAW47716.1| mitochondrial translational release factor 1-like, isoform CRA_a [Homo sapiens] gi|312151704|gb|ADQ32364.1| mitochondrial translational release factor 1-like [synthetic construct] Length = 380 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 108/246 (43%), Positives = 143/246 (58%), Gaps = 9/246 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 299 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343 L+ EEI + K +IG GR +IR+Y P V D R N + GD L Sbjct: 300 LE--EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLL 356 Query: 344 DDFMKA 349 D+ +++ Sbjct: 357 DELVQS 362 >gi|237785868|ref|YP_002906573.1| peptide chain release factor 1 [Corynebacterium kroppenstedtii DSM 44385] gi|259585217|sp|C4LJM5|RF1_CORK4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|237758780|gb|ACR18030.1| peptide chain release factor RF-1 [Corynebacterium kroppenstedtii DSM 44385] Length = 357 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 149/243 (61%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +EV +GAGG E+ +A L+RMY R+A+K F + L+ + GIK T+ I Sbjct: 103 DGDDIVMEVKSGAGGEEAALFAGELVRMYQRYADKHGFAIDVLDDAPTDLGGIKDITMSI 162 Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K P+ A+ K E GVHR+ R+ +S R TS + + VYP D+ ++EI + D Sbjct: 163 RSKKPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEIEDVEIDDKD 222 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R+D YR+SG GGQ VNTTDSAVRITH+PTG++V CQ+ERSQ +NKA+A +L A+L ++ Sbjct: 223 IRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLIVTCQKERSQIQNKARAMQVLAARLQQM 282 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + ++ E A+ +++ + +IR+Y P + D R N + + VLDGDLDD Sbjct: 283 KEEEAEAAASADRAAQVRTMDRSERIRTYNF-PENRISDHRINYKAHNLDQVLDGDLDDL 341 Query: 347 MKA 349 A Sbjct: 342 FSA 344 >gi|291524540|emb|CBK90127.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium rectale DSM 17629] Length = 358 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 120/337 (35%), Positives = 176/337 (52%), Gaps = 29/337 (8%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P + + K LM+E+ L + K+ ++ C I ED +IL E SD Sbjct: 21 EPDVANDANRFKKLMKEQSDLAPIVETYKKYKE--CKQNI-------EDSLAILNEESDE 71 Query: 92 LQRIKLEVEYKQFESLLSGEA----------DSND---AYLEVHAGAGGTESQDWANMLL 138 R + E K + + D ND +E+ AGAGG E+ +A + Sbjct: 72 EMRELAKEELKDSKEQVEELEKELKILLLPKDPNDDKNVIVEIRAGAGGEEAALFAAEIY 131 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY +AE R +K E L+ + G+KS ++KG AY LK E GVHR+ R+ +S Sbjct: 132 RMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGVHRVQRVPETES 191 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R TS S+ V P +D + RID RASG GGQ VNTTDSAVR+TH PTG Sbjct: 192 QGRIQTSTCSVAVMPEAEDVDVKIDDKDI-RIDVMRASGNGGQCVNTTDSAVRLTHYPTG 250 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +V+ Q E+SQ +NK +A+ +LR KLY++ELQK+++ E +++IG G +IR+Y Sbjct: 251 IVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQDAE--AEERRSQIGTGDRAEKIRTY 308 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R N+ +L+GD+ + + A +A Sbjct: 309 NF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIA 344 >gi|121593273|ref|YP_985169.1| peptide chain release factor 1 [Acidovorax sp. JS42] gi|166223524|sp|A1W4B8|RF1_ACISJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120605353|gb|ABM41093.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax sp. JS42] Length = 367 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/248 (39%), Positives = 143/248 (57%), Gaps = 14/248 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A++E+ AG GG ES +A L RMYTR+A +K E + ++ E G K L I Sbjct: 107 DERNAFIEIRAGTGGDESALFAGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRI 166 Query: 173 KGPNA--------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +G + YG LK E G HR+ R+ ++ R HTS ++ V P D+ I ++ Sbjct: 167 EGQSGTGPSGSGVYGALKFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLN 226 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RIDT+RASGAGGQH+N TDSAVR+ H+PTG+V +CQ RSQH NKA+A +L+A++ Sbjct: 227 PADLRIDTFRASGAGGQHINKTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARI 286 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 E E + E A K IG G +IR+Y P + D R N+ +++G Sbjct: 287 QEKE--RSERAAKEAALRKGLIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEG 343 Query: 342 DLDDFMKA 349 DL + ++A Sbjct: 344 DLGEVLQA 351 >gi|92116091|ref|YP_575820.1| peptide chain release factor 1 [Nitrobacter hamburgensis X14] gi|119361567|sp|Q1QQY7|RF1_NITHX RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91798985|gb|ABE61360.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter hamburgensis X14] Length = 361 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 144/243 (59%), Gaps = 12/243 (4%) Query: 106 SLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +LL +A D + LE+ AG GG E+ +A L RMY R+A + +K EA+ +G G Sbjct: 100 ALLPKDAMDERNVMLEIRAGTGGDEASLFAGDLFRMYERFAGLQGWKVEAISASEGTMGG 159 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K ++G AY LK E GVHR+ R+ ++ R HTS +++ V P ++ ++++I Sbjct: 160 YKEIVAEVRGRGAYAKLKFESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEE-VDVDIK 218 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV Q RSQHKN+A A N+LR+++ Sbjct: 219 TDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRI 278 Query: 285 YELELQKREEIANIGESS--KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 Y+ E Q+ N S+ K ++G G +IR+Y P V D R N+ V+ Sbjct: 279 YDAERQR----INAARSADRKDQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVI 333 Query: 340 DGD 342 GD Sbjct: 334 AGD 336 >gi|222109995|ref|YP_002552259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY] gi|254790879|sp|B9ME05|RF1_DIAST RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|221729439|gb|ACM32259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY] Length = 367 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 120/348 (34%), Positives = 185/348 (53%), Gaps = 22/348 (6%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +Q L FL ++ ED + ++ + + + RE + Q R D E+ Sbjct: 12 YAQRLQELDFLLSR-ED--IMADMQQYRSISREHAEVTQVAGRYARYQQREADLAGAREM 68 Query: 76 ALEEDDCSILQET--SDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQD 132 + D + QE + + ++LE E ++ LL + D +A++E+ AG GG ES Sbjct: 69 LEDPDMAEMAQEEIHAAETELVQLEDELQRL--LLPKDPDDERNAFIEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNA---YGWLKGE 184 +A L RMYTR+A +K E + ++ E G K L I+G P+ YG LK E Sbjct: 127 FAGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQPGTGPSGSGVYGALKFE 186 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ ++ R HTS ++ V P D+ I ++ +D RIDT+RASGAGGQH+N Sbjct: 187 SGGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGAGGQHIN 246 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVR+ H+PTG+V +CQ RSQH NKA+A +L+A++ E E + E A K Sbjct: 247 KTDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKE--RSERAAKEAALRKG 304 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 IG G +IR+Y P + D R N+ +++GDL + ++A Sbjct: 305 LIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLQA 351 >gi|158300556|ref|XP_320444.4| AGAP012082-PA [Anopheles gambiae str. PEST] gi|157013216|gb|EAA00433.4| AGAP012082-PA [Anopheles gambiae str. PEST] Length = 384 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/286 (37%), Positives = 163/286 (56%), Gaps = 22/286 (7%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 L NV+E + +R+ + + +S +KE++D D ++ L L+E + Sbjct: 60 LLSNVVE---MYEQRKIIVDNLSSLKELKDDKDDEMVQL-----------LKEEREAYGS 105 Query: 95 IKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 I ++ + +LS E D +EV AG GG E+ +A L MY + E + ++ Sbjct: 106 ILFRLDSEILNGILSMDDEEDYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEYKGWEV 165 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L+ + + G + AT +I GP+AY +LK E GVHR+ RI + + R HTS ++ + Sbjct: 166 EMLQTENTDIGGTRHATTVISGPDAYRYLKHEGGVHRVQRIPATEKSGRIHTSTVTVSII 225 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P DD ++E+ E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN Sbjct: 226 PRPDD-FQVELKEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQQKN 284 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 + A L AKL ++EL+ R ++ K+++G +IR+Y Sbjct: 285 REIAKQKLTAKLMQIELEAR--FSSTQALKKSQVGQSLRNEKIRTY 328 >gi|81428746|ref|YP_395746.1| peptide chain release factor 1 [Lactobacillus sakei subsp. sakei 23K] gi|119361554|sp|Q38WJ4|RF1_LACSS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78610388|emb|CAI55438.1| Peptide chain release factor 1 [Lactobacillus sakei subsp. sakei 23K] Length = 365 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 118/359 (32%), Positives = 185/359 (51%), Gaps = 23/359 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFI 59 + + L GL D R + L DP + L +E L + + + Sbjct: 1 MDKMFEQLDGLLD------RYAELQELMSDPEVINETSRYMELSKEEAGLREIVGKYTRL 54 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-- 117 KE+ + +N LL + + +++ + LQ K ++E Q +L D ND Sbjct: 55 KEVLSEVTENEELLRETTDSEMTELVKADLEELQTEKAQLE--QEIKILMLPTDPNDEKN 112 Query: 118 -YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGG E+ +A LL MY R+AE + ++TE ++ E G K ++I G N Sbjct: 113 IIMEIRGAAGGDEASLFAGDLLNMYQRYAESQNWQTEIIDETATEVGGFKEVAMMITGKN 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 Y LK E G HR+ RI +S R HTS +++ V P D +++E+ D R+D YRAS Sbjct: 173 VYSKLKYENGAHRVQRIPKTESQGRVHTSTATVAVMPEYD-GVDVELEAKDIRVDVYRAS 231 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI 295 GAGGQH+N T SAVR+THIPTG+VV Q +RSQ +N+ +A +L+A++Y+ E Q + E Sbjct: 232 GAGGQHINKTSSAVRMTHIPTGIVVAMQDQRSQQQNRVKAMKILQARVYDYYESQNQSEY 291 Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + S K+ +G G +IR+Y P V D R + +++G+L D + A + Sbjct: 292 DS---SRKSAVGSGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGDVIDALI 346 >gi|118464752|ref|YP_880755.1| peptide chain release factor 1 [Mycobacterium avium 104] gi|166223570|sp|A0QCW7|RF1_MYCA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118166039|gb|ABK66936.1| peptide chain release factor 1 [Mycobacterium avium 104] Length = 357 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 124/328 (37%), Positives = 173/328 (52%), Gaps = 21/328 (6%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP L N EA+ R L + +++ D ELA DD S Sbjct: 18 LERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLETARELAA--DDDSFT 75 Query: 86 QETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTESQDWANMLLR 139 E +D LE Q ++ L+ D++D LEV +G GG ES +A L R Sbjct: 76 AEVAD------LESRVAQLDTQLTDMLAPRDSHDADDIVLEVKSGEGGEESALFAADLAR 129 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRIS 194 MY R+AE+ + L+ + G K ATL I KG +A G W +K E GVHR+ R+ Sbjct: 130 MYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEGGVHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS + + VYP ++ E++I ESD RID +R+SG GGQ VNTTDSAVRITH Sbjct: 190 VTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIR 313 +PTGVVV CQ ERSQ +NKA+A +L A+L + ++ A+ +S+ + +IR Sbjct: 250 LPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRSERIR 309 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +Y P + D R + + VLDG Sbjct: 310 TYNF-PENRITDHRIGFKAHNLDQVLDG 336 >gi|307128516|ref|YP_003880546.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI] gi|306482978|gb|ADM89848.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI] Length = 355 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/260 (36%), Positives = 153/260 (58%), Gaps = 6/260 (2%) Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 Q ++L++ K+ + + + +A +E+ AG GG E+ + + RMYT + ++ + Sbjct: 91 QILELKLILKKIQIYFENQNNHKNALMELRAGTGGDEACIFVEDIFRMYTMYFKELCWNY 150 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E L + G G K L I+G N YG LK E GVHR+ R+ +S R HTS ++ ++ Sbjct: 151 EILNMQHGPIKGYKEIILEIQGKNVYGTLKFESGVHRVQRVPYTESQGRLHTSAITVAIF 210 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P D +I + SD + DT+RASGAGGQHVN T+SA+R+THIPTG++ +CQ+ERSQHKN Sbjct: 211 PEEDYKKKINLILSDIKRDTFRASGAGGQHVNKTESAIRLTHIPTGIIAECQEERSQHKN 270 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329 +A +LRA++Y+ EL +++E + + K I G +IR+Y P V D R N Sbjct: 271 YEKAMKVLRARIYQSELNQKKE--KLSKERKDLISTGDRSAKIRTYNY-PQGRVTDHRIN 327 Query: 330 IEKTSPSDVLDGDLDDFMKA 349 + ++G +++ + A Sbjct: 328 KSIYNLDHFMNGKINEMITA 347 >gi|315080405|gb|EFT52381.1| peptide chain release factor 1 [Propionibacterium acnes HL078PA1] Length = 361 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 119/347 (34%), Positives = 185/347 (53%), Gaps = 28/347 (8%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D +RL + T+ D + + L + L + +S + D+L ++ E Sbjct: 10 DEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 EED L+ ++ L R +L++ + LL S D DA +E+H+G GG ES +A Sbjct: 69 TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191 LLRMYTR+AE+ + L + G ++ + + G P+ YG+LK E GVHR+ Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPVYGYLKHEGGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302 +TH+PTG+V CQ ERSQ +NKA+A MLRAK+ E + +R+++ + S+ Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +R+Y P + D R + +L GDL D + A Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342 >gi|302327519|gb|ADL26720.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 358 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 11/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ G GG ES +A L RMY + +K +K ++ +G G K + I Sbjct: 108 DYRNATLEIRGGTGGDESALFAGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + YG LK E GVHR+ R+ ++ R HTS +++ + P ++ +++EI E+D +DT Sbjct: 168 EGDSVYGTLKFESGVHRVQRVPETETQGRVHTSAATVAILPEAEE-VDVEIREADIHMDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291 YR+SGAGGQ++N TDSAVR+THIPTGVVV CQ ERSQ +N+ A MLR+K+ + + K Sbjct: 227 YRSSGAGGQYINKTDSAVRLTHIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKK 286 Query: 292 -REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +EE AN K +G G +IR+Y P V D R + + V+ GDLD+ + Sbjct: 287 EKEEAAN----RKALVGTGDRSAKIRTYNY-PQNRVTDHRIGLTVYNLDKVVTGDLDEII 341 >gi|238923860|ref|YP_002937376.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656] gi|259585240|sp|C4Z911|RF1_EUBR3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238875535|gb|ACR75242.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656] Length = 358 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 114/328 (34%), Positives = 180/328 (54%), Gaps = 11/328 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLELALEEDDCSIL-QE 87 +P + + K LM+E+ L + K E + + D+L +L+ +E+ + +E Sbjct: 21 EPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIEDSLAILDEESDEEMRELAKEE 80 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 D+ ++++ + + L D + +E+ AGAGG E+ +A + RMY +AE Sbjct: 81 LKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGGEEAALFAAEIYRMYVHYAEN 140 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R +K E L+ + G+KS ++KG AY LK E GVHR+ R+ +S R TS Sbjct: 141 RGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGVHRVQRVPETESQGRIQTSTC 200 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S+ V P +D + RID RASG GGQ VNTTDSAVR+TH PTG+V+ Q E+ Sbjct: 201 SVAVMPEAEDVDVKIDDKDI-RIDVMRASGNGGQCVNTTDSAVRLTHYPTGIVIYSQTEK 259 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQ +NK +A+ +LR KLY++ELQK+++ E +++IG G +IR+Y P V Sbjct: 260 SQIQNKEKAFALLRTKLYDMELQKKQDAE--AEERRSQIGTGDRAEKIRTYNF-PQGRVT 316 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R N+ +L+GD+ + + A +A Sbjct: 317 DHRINLTLYKLDKILNGDIQEIIDACIA 344 >gi|313837661|gb|EFS75375.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2] gi|314972601|gb|EFT16698.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3] Length = 388 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/270 (38%), Positives = 156/270 (57%), Gaps = 24/270 (8%) Query: 94 RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R +L++ + LL S D DA +E+H+G GG ES +A LLRMYTR+AE+ + Sbjct: 110 RGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYTRYAERVGWS 169 Query: 152 TEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 L + G ++ + + G P+ AYG+LK E GVHR+ R+ +S+ R HTS Sbjct: 170 VRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 229 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD++ E++I +D R+D YR+SG GGQ VNTTDSAVR+TH+PTG+VV CQ ERS Sbjct: 230 VLVMPDVDET-EVDIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERS 288 Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q +NKA+A MLRAK+ E + +R+++ + S++ +R+Y P Sbjct: 289 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 339 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + D R + +L GDL + + A Sbjct: 340 ENRLTDHRIGYKSRKLDQILAGDLGEVLDA 369 >gi|291334339|gb|ADD93998.1| peptide chain release factor 1 [uncultured marine bacterium MedDCM-OCT-S11-C310] Length = 355 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/245 (39%), Positives = 146/245 (59%), Gaps = 18/245 (7%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMY+R+AE+ ++ + + + +G + G+K + + Sbjct: 106 DDKNVLLEIRAGTGGDEAALFAGDLFRMYSRYAERSGWRVDVMSMSEGTQGGVKEVIVWL 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 + + +K E GVHR+ R+ +S R HTS +++ V P +++ EI+I D RIDT Sbjct: 166 RA-TTFFCVKYESGVHRVQRVPATESQGRIHTSAATVAVMPEAEEA-EIDIRNEDLRIDT 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291 YR+ GAGGQHVNTTDSAVRITH+PTG+VVQCQ E+SQ KN+A+A +L ++L + QK Sbjct: 224 YRSQGAGGQHVNTTDSAVRITHLPTGMVVQCQDEKSQIKNRAKAMKVLSSRLLDFIRQKE 283 Query: 292 -------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 R+E+ G+ S+ +IR+Y P + D R + VL GDL+ Sbjct: 284 AAERAAERKELVRTGDRSE-------KIRTYNF-PQDRITDHRIGFSAHNLPAVLQGDLE 335 Query: 345 DFMKA 349 + A Sbjct: 336 AVLIA 340 >gi|71043904|ref|NP_001020894.1| peptide chain release factor 1-like, mitochondrial precursor [Rattus norvegicus] gi|81907899|sp|Q4V7E5|RF1ML_RAT RecName: Full=Peptide chain release factor 1-like, mitochondrial; AltName: Full=Mitochondrial translational release factor 1-like; Flags: Precursor gi|66910900|gb|AAH97970.1| Mitochondrial translational release factor 1-like [Rattus norvegicus] Length = 373 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 111/279 (39%), Positives = 160/279 (57%), Gaps = 11/279 (3%) Query: 78 EEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGE-ADSNDAYLEVHAGAGGTESQDWAN 135 E +D L E+ L Q+ E++++ L+ E D +D LEV AG GG E+ + + Sbjct: 81 ENEDLKKLAESEIALCQKEIAELKHRIISLLVPSEDMDGSDLILEVTAGVGGQEAMLFTS 140 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 + MY ++A +++ E LE E G++ A+ I GP AY +K E GVHR+ R+ Sbjct: 141 EMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGPEAYRHMKFEGGVHRVQRVPK 200 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 + R HTS ++ + P + I++ I+ D RIDT RASGAGGQHVNTTDSAVRI H+ Sbjct: 201 TERQGRIHTSTMTVAILPQPTE-IKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHL 259 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR--QI 312 PTG++ +CQQERSQ KN+ A LRA+LY + L+ EE A + K ++G GR +I Sbjct: 260 PTGIISECQQERSQLKNRELAMKKLRARLYSMRLE--EETAKRYSARKIQVGTKGRSEKI 317 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349 R+Y P V D R N + GD LDD +++ Sbjct: 318 RTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDDLIQS 355 >gi|294623963|ref|ZP_06702760.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601738|gb|EFF45678.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 178 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 85/143 (59%), Positives = 110/143 (76%), Gaps = 1/143 (0%) Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++V P VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RS Sbjct: 1 MFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRS 60 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+N+ A ML AKLYELE+QKR + E++K++IGWG QIR+YVL + +KDLRT Sbjct: 61 QHQNRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLDQSR-IKDLRT 119 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 IE++ VLDGDLD+F++A+L Sbjct: 120 GIERSDTQKVLDGDLDEFVEASL 142 >gi|41408560|ref|NP_961396.1| peptide chain release factor 1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254774338|ref|ZP_05215854.1| peptide chain release factor 1 [Mycobacterium avium subsp. avium ATCC 25291] gi|61214644|sp|Q73X48|RF1_MYCPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|41396918|gb|AAS04779.1| PrfA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 357 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 124/328 (37%), Positives = 173/328 (52%), Gaps = 21/328 (6%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP L N EA+ R L + +++ D ELA DD S Sbjct: 18 LERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLETARELAA--DDDSFT 75 Query: 86 QETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTESQDWANMLLR 139 E +D LE Q ++ L+ D++D LEV +G GG ES +A L R Sbjct: 76 AEVAD------LESRVAQLDTQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLAR 129 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRIS 194 MY R+AE+ + L+ + G K ATL I KG +A G W +K E GVHR+ R+ Sbjct: 130 MYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEGGVHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS + + VYP ++ E++I ESD RID +R+SG GGQ VNTTDSAVRITH Sbjct: 190 VTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIR 313 +PTGVVV CQ ERSQ +NKA+A +L A+L + ++ A+ +S+ + +IR Sbjct: 250 LPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRSERIR 309 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +Y P + D R + + VLDG Sbjct: 310 TYNF-PENRITDHRIGFKAHNLDQVLDG 336 >gi|149195429|ref|ZP_01872512.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2] gi|149134434|gb|EDM22927.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2] Length = 355 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 112/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V++ + +N K P + +++ + L RE + L+ ++ KE ++ L +NL ++ L++ Sbjct: 10 VEKYNEINQKLSSPEITKDIKQMTKLSREARSLEEIVNKAKEYEE-LLNNLEEAKMMLDD 68 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANM 136 + S L + KL ++ + LL + D ND +LE+ AG GG E+ + Sbjct: 69 AEMSELAKEEIKEIEEKLPKLEEEIKLLLLPK-DPNDDKNIFLEIRAGTGGDEAALFVGD 127 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L++ Y R+A+ + +K E + + G K LLIKG AY LK E G HR+ RI Sbjct: 128 LMKAYLRYADNKGWKVEIVSESKNDIGGYKEIILLIKGEGAYSRLKYEGGTHRVQRIPAT 187 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS ++ V P VDD ++IE+ D +I+ RA GAGGQHVN T+SAVR+THIP Sbjct: 188 ESQGRIHTSAVTVAVMPEVDD-VDIELDPKDIKIEVMRAGGAGGQHVNKTESAVRMTHIP 246 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+ V Q ERSQ +NK +A +L+A++YE +L+K E + IG+ K+++G G +IR Sbjct: 247 TGITVSMQDERSQQRNKEKALQILKARVYE-KLEK-ERLEKIGKERKSQVGSGDRSERIR 304 Query: 314 SY 315 +Y Sbjct: 305 TY 306 >gi|115522190|ref|YP_779101.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisA53] gi|122298096|sp|Q07VB3|RF1_RHOP5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|115516137|gb|ABJ04121.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas palustris BisA53] Length = 359 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/241 (41%), Positives = 145/241 (60%), Gaps = 8/241 (3%) Query: 106 SLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +LL +A D + LEV AG GG E+ +A L RMY ++A + + E + +G G Sbjct: 100 ALLPKDAMDDRNVMLEVRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGAAGG 159 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K +KG A+ LK E GVHR+ R+ ++ R HTS +++ V P V++ +++EI Sbjct: 160 FKEIIAEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVMPEVEE-VDVEIK 218 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + D +IDT RA GAGGQHVN T+SA+RITH+PTG+VV Q RSQHKN+A A N+LR+++ Sbjct: 219 QDDLKIDTMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRI 278 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E Q+R + A E K ++G G +IR+Y P V D R N+ V+ G Sbjct: 279 YDAE-QQRLDAARSAE-RKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAG 335 Query: 342 D 342 + Sbjct: 336 E 336 >gi|256370594|ref|YP_003108419.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM] gi|256009386|gb|ACU52746.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM] Length = 348 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 118/336 (35%), Positives = 181/336 (53%), Gaps = 27/336 (8%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISF----------IKEIQDRLCDNLILLELALEEDDC 82 P + +N + +L +E + L I++ IKEI++ L + LLELA E Sbjct: 27 PEIIKNYKKYILLSKEYKFLYKIINYYNNLKKNKTNIKEIENLLKKDSELLELAFLEKK- 85 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 ++ E L +I E+LL + + N +E+ AG GG E+ + + RMYT Sbjct: 86 NLFLEKKKILNKI---------ENLLK-KKNYNKILMELRAGTGGDEACIFVEDIFRMYT 135 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 + ++ +K + L + G G K L I+G N Y LK E GVHR+ RI +S R Sbjct: 136 LYFKELGWKYDILNMQQGSIKGYKEIILEIEGKNVYDKLKFESGVHRVQRIPYTESQGRL 195 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS ++ V P I+I SD + +T++ASGAGGQHVN T+SA+R+THIPTG+V + Sbjct: 196 HTSAITVAVIPENYYKNNIKIVLSDLKRETFKASGAGGQHVNKTESAIRLTHIPTGIVAE 255 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 CQ+ERSQHKN +A +LRA++Y E +K+ E+ + + K+ I G +IR+Y P Sbjct: 256 CQEERSQHKNYEKAIKVLRARIYNSEFKKKNEL--LSKKRKSLISTGERSEKIRTYNY-P 312 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 V D R N ++G L++ + A ++K Sbjct: 313 QGRVTDHRINKSIYYLDHFMNGKLNEMITALQILEK 348 >gi|255326261|ref|ZP_05367347.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296] gi|283458332|ref|YP_003362953.1| protein chain release factor A [Rothia mucilaginosa DY-18] gi|255296715|gb|EET76046.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296] gi|283134368|dbj|BAI65133.1| protein chain release factor A [Rothia mucilaginosa DY-18] Length = 360 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 109/266 (40%), Positives = 156/266 (58%), Gaps = 12/266 (4%) Query: 96 KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 +LEV ++ LL D + LEV AGAGG E+ +A LLRMY R+AE + +KTE Sbjct: 81 ELEVAQEKLRRLLIPRDPDDGRNVILEVKAGAGGDEAALFAGDLLRMYMRYAEHKGWKTE 140 Query: 154 ALEIHDGEEAGIKSATLLIKG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFS 207 + + G K A + IKG P W LK E GVHR+ R+ +S R HTS + Sbjct: 141 IISSTSTDVGGYKDAQIAIKGSSNEPAEGVWAHLKYEGGVHRVQRVPATESQGRIHTSAA 200 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 + V+P VD+ EIEI+++D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+ Sbjct: 201 GVLVFPEVDEPEEIEINQNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEK 260 Query: 268 SQHKNKAQAWNMLRAKL--YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 SQ +N+ A +LRA+L ++ E E A+ +T + +IR+Y P + D Sbjct: 261 SQLQNREAAMRVLRARLLAHQQEQIDAENAAHRASQVRT-MDRSERIRTYNF-PENRIAD 318 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 RT + + VL+GDL+ +++ + Sbjct: 319 HRTGYKAYNLDAVLNGDLEPVVQSAI 344 >gi|172058704|ref|YP_001815164.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15] gi|229576657|sp|B1YEH9|RF1_EXIS2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|171991225|gb|ACB62147.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15] Length = 352 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/260 (38%), Positives = 151/260 (58%), Gaps = 13/260 (5%) Query: 97 LEVEYKQFESLLSG---EADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 LE E K E+ L D ND +E+ AGG E+ +A L +MY+++AEK+ + Sbjct: 81 LEPEIKDLETKLKALLLPKDPNDDKNVIVEIRGAAGGDEAALFAGDLFKMYSKFAEKQNW 140 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E ++ E G K ++KG AY LK E G HR+ R+ +S R HTS +++ Sbjct: 141 KIEIIDASYTELGGYKEIIFIVKGSGAYSKLKYENGAHRVQRVPSTESGGRIHTSTATVA 200 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P +D +E+EI + D R+DT+ +SG GGQ VNTT SAVR+TH+PTG+V CQ E+SQ Sbjct: 201 VLPEAED-VEVEIHDKDVRVDTFTSSGPGGQSVNTTQSAVRVTHVPTGIVASCQDEKSQI 259 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327 KNK +A +LRA++Y+ ++Q RE+ A E K+ +G G +IR+Y V D R Sbjct: 260 KNKEKAMKVLRARVYD-KIQ-REQQAEYDEKRKSAVGTGDRSERIRTYNF-AQNRVTDHR 316 Query: 328 TNIEKTSPSDVLDGDLDDFM 347 + +L G++D+ + Sbjct: 317 IGLTIQKLDRILQGEMDEVI 336 >gi|322379189|ref|ZP_08053581.1| peptide chain release factor 1 [Helicobacter suis HS1] gi|322379995|ref|ZP_08054263.1| peptide chain release factor 1 [Helicobacter suis HS5] gi|321147584|gb|EFX42216.1| peptide chain release factor 1 [Helicobacter suis HS5] gi|321148391|gb|EFX42899.1| peptide chain release factor 1 [Helicobacter suis HS1] Length = 352 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 124/345 (35%), Positives = 187/345 (54%), Gaps = 23/345 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLE-- 74 V R L P + +V L +E+ L+ K +I D++ +N LLE Sbjct: 10 VARYDALALCLTQPEVLNDVKRLTELSKEQASLEELAQAAKRYLKILDQIQENKALLEDK 69 Query: 75 --LALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L +++ L+E S NL IK+ + K DS + YLE+ AG GG E+ Sbjct: 70 ELGELAKEELKSLEEQSKNLGDHIKILLIPKD-------PNDSKNIYLELRAGTGGDEAG 122 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L R Y R+A+ +++K E + + G K LIKG Y LK E G HR+ Sbjct: 123 IFVGDLFRTYCRYADLKRWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFEAGTHRVQ 182 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ + P DD +EI I+ SD RI+ +RA G GGQ VNTTDSAVR Sbjct: 183 RVPETESQGRIHTSAITVAIMPEADD-VEININPSDLRIEVFRAGGHGGQCVNTTDSAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+ V Q E+SQHKN+ +A +L+A+LYE +++++++ A+ E K ++G G Sbjct: 242 ITHIPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQ-AHSAE-RKMQVGSGDR 299 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 +IR+Y P + D R N+ S ++ L G+LD ++ +A Sbjct: 300 SERIRTYNY-PQNRLSDHRINLTLYSLEELMLSGNLDPVIEPLIA 343 >gi|261416348|ref|YP_003250031.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372804|gb|ACX75549.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 355 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 144/240 (60%), Gaps = 11/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ G GG ES +A L RMY + +K +K ++ +G G K + I Sbjct: 105 DYRNATLEIRGGTGGDESALFAGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + YG LK E GVHR+ R+ ++ R HTS +++ + P ++ +++EI E+D +DT Sbjct: 165 EGDSVYGTLKFESGVHRVQRVPETETQGRVHTSAATVAILPEAEE-VDVEIREADIHMDT 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291 YR+SGAGGQ++N TDSAVR+THIPTGVVV CQ ERSQ +N+ A MLR+K+ + + K Sbjct: 224 YRSSGAGGQYINKTDSAVRLTHIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKK 283 Query: 292 -REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +EE AN K +G G +IR+Y P V D R + + V+ GDLD+ + Sbjct: 284 EKEEAAN----RKALVGTGDRSAKIRTYNY-PQNRVTDHRIGLTVYNLDKVVTGDLDEII 338 >gi|193211744|ref|YP_001997697.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327] gi|238692678|sp|B3QRH7|RF1_CHLP8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|193085221|gb|ACF10497.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327] Length = 357 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 91/247 (36%), Positives = 155/247 (62%), Gaps = 8/247 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-I 165 L EAD+ +A +E+ AG GG E+ +A L+RMY R+AE++ + + L++ +G G + Sbjct: 100 LPKDEADTRNAIIEIRAGTGGDEAGLFAADLMRMYQRYAERQGWSCQTLDVSEGSVPGSL 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K +L + G + YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ +++EI + Sbjct: 160 KEVSLEVSGHDVYGILKFESGVHRVQRVPETETQGRIHTSAASVAVLPEAEE-VDVEIRK 218 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D ++DT+R+ G GGQ+VN ++AVRITH+P+G+VV CQ+ERSQ +N+ +A MLR+KLY Sbjct: 219 DDLQMDTFRSGGKGGQNVNKVETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLY 278 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 ++++ E++ + + ++ + G +IR+Y P V D R + V+ G+ Sbjct: 279 DIKIT--EQLQSRADLRRSMVATGDRSAKIRTYNF-PQSRVTDHRIGFTTHALPQVMQGE 335 Query: 343 LDDFMKA 349 L+ + A Sbjct: 336 LEPIIDA 342 >gi|148543687|ref|YP_001271057.1| peptide chain release factor 1 [Lactobacillus reuteri DSM 20016] gi|227363334|ref|ZP_03847463.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3] gi|227544508|ref|ZP_03974557.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A] gi|300909304|ref|ZP_07126765.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112] gi|325682058|ref|ZP_08161576.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A] gi|148530721|gb|ABQ82720.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus reuteri DSM 20016] gi|227071641|gb|EEI09935.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3] gi|227185531|gb|EEI65602.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A] gi|300893169|gb|EFK86528.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112] gi|324978702|gb|EGC15651.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A] Length = 362 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 117/348 (33%), Positives = 188/348 (54%), Gaps = 14/348 (4%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68 +FD AV R LN DP + + L +E L + + K++ + D Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQTISD 65 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 + LL ++D ++ +E + + ++E K+ E LL D + +E+ AG Sbjct: 66 DEELLRETNDDDLTALTKEELAEAREEQAQLE-KELEVLLIPKDPNDDKNIIMEIRGAAG 124 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY R+AEK+ +K E ++ ++ E G K L+I G Y LK E G Sbjct: 125 GDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENG 184 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P +D ++++I D R+D YR+SGAGGQHVN T Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGAGGQHVNKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ Q++E+ A + K I Sbjct: 244 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDY-YQQQEQSA-YDQKRKDAI 301 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G G +IR+Y P V D R + ++ GDLD+ ++A + Sbjct: 302 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALI 348 >gi|149038509|gb|EDL92839.1| rCG41113 [Rattus norvegicus] Length = 384 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 111/279 (39%), Positives = 160/279 (57%), Gaps = 11/279 (3%) Query: 78 EEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGE-ADSNDAYLEVHAGAGGTESQDWAN 135 E +D L E+ L Q+ E++++ L+ E D +D LEV AG GG E+ + + Sbjct: 92 ENEDLKKLAESEIALCQKEIAELKHRIISLLVPSEDMDGSDLILEVTAGVGGQEAMLFTS 151 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 + MY ++A +++ E LE E G++ A+ I GP AY +K E GVHR+ R+ Sbjct: 152 EMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGPEAYRHMKFEGGVHRVQRVPK 211 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 + R HTS ++ + P + I++ I+ D RIDT RASGAGGQHVNTTDSAVRI H+ Sbjct: 212 TERQGRIHTSTMTVAILPQPTE-IKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHL 270 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR--QI 312 PTG++ +CQQERSQ KN+ A LRA+LY + L+ EE A + K ++G GR +I Sbjct: 271 PTGIISECQQERSQLKNRELAMKKLRARLYSMRLE--EETAKRYSARKIQVGTKGRSEKI 328 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349 R+Y P V D R N + GD LDD +++ Sbjct: 329 RTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDDLIQS 366 >gi|220920161|ref|YP_002495462.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060] gi|254790889|sp|B8IUB4|RF1_METNO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219944767|gb|ACL55159.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060] Length = 359 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 117/318 (36%), Positives = 173/318 (54%), Gaps = 23/318 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD-NLILLELALEEDDCSILQETSDNLQRIKLEVEYK- 102 L RE LD+ ++ I+ R D L +E LEE D + ++ K EVE Sbjct: 36 LSRELSDLDDVVAAIRAY--RAADAELRGVEAMLEEGDPEMRALAAEE----KPEVEAAR 89 Query: 103 -------QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 Q L AD A LE+ AG GG E+ +A L RMY R+A+ + +K E + Sbjct: 90 DAAAKALQILLLPKDSADEKSAILEIRAGTGGDEAALFAGDLFRMYARYADLKGWKVEVV 149 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 G G + +KG + LK E G HR+ R+ ++ R HTS +++ V P Sbjct: 150 SESPGTMGGYREVVAEVKGRGVFARLKFESGAHRVQRVPETETQGRIHTSAATVAVLPEA 209 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 ++ ++I ++E+D +IDT RA GAGGQHVN T+SA+RITH+P+G+VV Q+ERSQHKN+A+ Sbjct: 210 EE-VDIHVNEADLKIDTMRAQGAGGQHVNKTESAIRITHMPSGIVVFVQEERSQHKNRAR 268 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332 A +LRA+LYE E + ++ A + ++G G +IR+Y P V D R N+ Sbjct: 269 AMAVLRARLYEQE--RSQKDAARAADRRAQVGSGDRSERIRTYNF-PQGRVTDHRINLTL 325 Query: 333 TSPSDVLDGD-LDDFMKA 349 +VL G LD+ + A Sbjct: 326 YKLEEVLAGTALDELVDA 343 >gi|115375817|ref|ZP_01463069.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1] gi|310822927|ref|YP_003955285.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1] gi|115367205|gb|EAU66188.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1] gi|309395999|gb|ADO73458.1| Peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1] Length = 366 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 109/337 (32%), Positives = 190/337 (56%), Gaps = 14/337 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-- 78 +R L +P + + + + + +ER L+ + + + L D L +E L+ Sbjct: 10 RRFERLTADLSNPDVLADSAKLQKVSKERAALEKLVETFRTYRKVLGD-LAEVEAWLDGG 68 Query: 79 -EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136 D+ + +E L++ + E E + LL + D D LE+ AGAGG E+ +A Sbjct: 69 DADEKAYAREALPGLKQQREEFEQELKILLLPKDPNDEKDVILEIRAGAGGDEAGLFAEE 128 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +++MY R+A +R +K + +++ G G+K T+ + G + +K E GVHR+ R+ Sbjct: 129 VMQMYLRYATRRGWKADIVDMSPGSVGGVKDVTITLSGAAVFSNMKYESGVHRVQRVPAT 188 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS ++ V P +D ++++I+ +D + R++G+GGQ VNTTDSAVR+ H P Sbjct: 189 ETQGRIHTSTITVSVMPEAED-VDVQINPADIEMQVMRSTGSGGQSVNTTDSAVRLIHKP 247 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG---RQI 312 +G+VV+CQQE+SQ KN+AQA MLRAKLYE+E ++ R E ++ + ++G G +I Sbjct: 248 SGIVVKCQQEKSQTKNRAQAMRMLRAKLYEIEQERIRSERDSM---RRGQVGTGDRSEKI 304 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 R+Y P + D R ++ + ++ G +DD + A Sbjct: 305 RTYNF-PQDRLTDHRISLTVHNLPGIMAGGIDDVITA 340 >gi|46199879|ref|YP_005546.1| peptide chain release factor 1 [Thermus thermophilus HB27] gi|55981909|ref|YP_145206.1| peptide chain release factor 1 [Thermus thermophilus HB8] gi|2500140|sp|P96077|RF1_THET8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|81567592|sp|Q72HB8|RF1_THET2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|88192257|pdb|2B64|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf1 And Is Described In Remark 400. gi|209156517|pdb|3D5A|X Chain X, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156573|pdb|3D5C|X Chain X, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|300508626|pdb|3MR8|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3ms1. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|300508681|pdb|3MS0|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3mrz. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (30s) And 3ms1 (50s). gi|1785848|dbj|BAA13349.1| peptide chain release factor 1 [Thermus thermophilus] gi|46197506|gb|AAS81919.1| peptide chain release factor 1 [Thermus thermophilus HB27] gi|55773322|dbj|BAD71763.1| peptide chain release factor 1 (RF-1) [Thermus thermophilus HB8] Length = 354 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 108/323 (33%), Positives = 170/323 (52%), Gaps = 10/323 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + ++ + L R + I I+E + ++ ++L E L++ + + + Sbjct: 21 DPEVLKDKGRYQSLSRRYAEMGEVIGLIREYR-KVLEDLEQAESLLDDPELKEMAKAERE 79 Query: 92 LQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + E K+ E L D DA +E+ AG GG E+ +A L MY R+AE+ Sbjct: 80 ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLFNMYLRFAEEMG 139 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+TE L+ H + G ++GP AYG K E GVHR+ R+ ++ R HTS +++ Sbjct: 140 FETEVLDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPVTETQGRIHTSTATV 199 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ + ++ + RID RASG GGQ VNTTDSAVR+ H+PTG++V CQ RSQ Sbjct: 200 AVLPKAEEE-DFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326 KN+ +A +LR++L LE+++ EE + ++ +IG G +IR+Y P V D Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315 Query: 327 RTNIEKTSPSDVLDGDLDDFMKA 349 R VL G L ++A Sbjct: 316 RIGFTTHDLEGVLSGHLTPILEA 338 >gi|184153097|ref|YP_001841438.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112] gi|238058717|sp|B2G676|RF1_LACRJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183224441|dbj|BAG24958.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112] Length = 360 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 117/348 (33%), Positives = 188/348 (54%), Gaps = 14/348 (4%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68 +FD AV R LN DP + + L +E L + + K++ + D Sbjct: 4 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQTISD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 + LL ++D ++ +E + + ++E K+ E LL D + +E+ AG Sbjct: 64 DEELLRETNDDDLTALTKEELAEAREEQAQLE-KELEVLLIPKDPNDDKNIIMEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY R+AEK+ +K E ++ ++ E G K L+I G Y LK E G Sbjct: 123 GDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P +D ++++I D R+D YR+SGAGGQHVN T Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGAGGQHVNKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ Q++E+ A + K I Sbjct: 242 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDY-YQQQEQSA-YDQKRKDAI 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G G +IR+Y P V D R + ++ GDLD+ ++A + Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALI 346 >gi|291243180|ref|XP_002741481.1| PREDICTED: CG5705-like [Saccoglossus kowalevskii] Length = 411 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 88/206 (42%), Positives = 135/206 (65%), Gaps = 6/206 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D++D +E+ AG GG E+ +A + MY R+A ++++ + L++ + GI+ AT+ + Sbjct: 149 DTSDVLVEISAGVGGQEAMLFAAEMFEMYQRYAHFQRWQFDVLDVGKSDIGGIRHATVSV 208 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 GP Y ++K E GVHR+ R+ + R HTS ++ V P + I+++I SD +I+T Sbjct: 209 SGPGVYSYMKYEGGVHRVQRVPKTEKQGRVHTSTMTVAVLPQPRE-IDLQIKPSDLKIET 267 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVNTTDSAVRI H+PTG+ +CQQERSQ KNKA A +L +LY +L+++ Sbjct: 268 KRASGAGGQHVNTTDSAVRIVHLPTGIAAECQQERSQIKNKAMAMKVLETRLYNKQLEEQ 327 Query: 293 EEIANIGESSKTEIG-WGR--QIRSY 315 + I +S K ++G GR +IR+Y Sbjct: 328 QHIQR--QSRKLQVGSSGRSEKIRTY 351 >gi|297559304|ref|YP_003678278.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843752|gb|ADH65772.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 356 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 116/332 (34%), Positives = 170/332 (51%), Gaps = 12/332 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP + + A+ L + L I + +++ D ELA E D S Sbjct: 13 LEQQLADPEVHADQARARTLGKRYAQLTPIIETYRALKEVESDIDTARELAAE--DSSFA 70 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E + + E + + AD + +EV AG GG ES +A L+RMY R+A Sbjct: 71 EEADRLTEEAERLTERLRVLLIPRDPADDKNLIMEVKAGEGGEESALFAGDLVRMYLRYA 130 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISPYDS 198 E++ +KTE ++ + G K T+ K G + LK E GVHR+ R+ +S Sbjct: 131 ERQGWKTEVIDSTHSDLGGYKDITIAFKNKGTPEPGSGVWPMLKFEGGVHRVQRVPVTES 190 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS + + V P +D IE+EI E D R+D YR+SG GGQ VNTTDSAVRITH+PTG Sbjct: 191 QGRIHTSAAGVLVVPEAED-IEVEIHEKDLRVDVYRSSGPGGQSVNTTDSAVRITHLPTG 249 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVL 317 +V CQ E+SQ +NK QA +LRA++Y + A S+ + ++R+Y Sbjct: 250 IVASCQNEKSQLQNKEQAMRILRARIYAEAQASADAEAAAERKSQVRTVDRSERVRTYNF 309 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P + D R + + VLDG+L +KA Sbjct: 310 -PENRISDHRVGYKAYNLDQVLDGELGGVVKA 340 >gi|189485187|ref|YP_001956128.1| peptide chain release factor 1 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|238054475|sp|B1GZI5|RF1_UNCTG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|170287146|dbj|BAG13667.1| peptide chain release factor 1 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 356 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/232 (40%), Positives = 140/232 (60%), Gaps = 7/232 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AG GG E+ + L MYTR+AE+ +K E L + G K I G + Sbjct: 112 VEIRAGTGGNEAALFVGDLYGMYTRFAERNGWKYEVLGSNPTGLGGYKEVVFEINGGKVW 171 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 K E+G HR+ R+ +++ R HTS +++ V P ++ +++EI D RIDTYRASGA Sbjct: 172 RCFKFERGAHRVQRVPETEASGRVHTSAATVAVLPEAEE-VDVEIKMEDLRIDTYRASGA 230 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQH+N TDSA+RITH+PTG+VV CQ ERSQ KN+A+A+ +LRAK+YE + + E + Sbjct: 231 GGQHINKTDSAIRITHLPTGLVVACQDERSQIKNRAKAFKVLRAKIYEQRILEHE--MRL 288 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K +IG G +IR+Y P + D R + ++V+DG+L + + Sbjct: 289 SSERKQQIGSGDRSEKIRTYNF-PQNRITDHRIGYSVYNITEVMDGNLSELV 339 >gi|315649892|ref|ZP_07902974.1| peptide chain release factor 1 [Paenibacillus vortex V453] gi|315274691|gb|EFU38073.1| peptide chain release factor 1 [Paenibacillus vortex V453] Length = 355 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 146/240 (60%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A+ L RMYTR+A+ + +K E ++++ + G K +I Sbjct: 106 DDKNVIIEIRGAAGGDEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E G HR+ RI +S R HTS S++ V P ++ ++IEI + D R+DT Sbjct: 166 NGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVAVMPEAEE-VDIEIHDKDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+THIPTG+V CQ +SQ+ NK +A +LRA+++ ++ ++ Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHIPTGIVATCQDGKSQNSNKDKALQVLRARIF--DMMRQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE A K+++G G +IR+Y P V D R + V++G++++ + A Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSA 341 >gi|188580162|ref|YP_001923607.1| peptide chain release factor 1 [Methylobacterium populi BJ001] gi|226739114|sp|B1Z914|RF1_METPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|179343660|gb|ACB79072.1| peptide chain release factor 1 [Methylobacterium populi BJ001] Length = 361 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/242 (39%), Positives = 146/242 (60%), Gaps = 8/242 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG E+ +A L RMY ++AE + ++ E + +G G + Sbjct: 108 ADEKSAILEIRAGTGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAE 167 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KG + + LK E G HR+ R+ ++ R HTS +++ V P ++ ++I I+E+D +ID Sbjct: 168 VKGRSVFSRLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAEE-VDIAINEADLKID 226 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RA GAGGQHVN T+SA+RITH+PTGVVV Q+ERSQHKN+A+A +LR+KL++ E Sbjct: 227 TMRAQGAGGQHVNKTESAIRITHMPTGVVVFVQEERSQHKNRARAMALLRSKLFDAERTA 286 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 ++ + K ++G G +IR+Y P V D R N+ +V+ G LD+ + Sbjct: 287 KD--SARAADRKAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGPALDEVI 343 Query: 348 KA 349 A Sbjct: 344 DA 345 >gi|302334925|ref|YP_003800132.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM 7084] gi|301318765|gb|ADK67252.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM 7084] Length = 355 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 124/339 (36%), Positives = 177/339 (52%), Gaps = 15/339 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83 L + DP + + E + +E ++ +E L D + E+ E D S Sbjct: 15 LEKRMVDPTVVSDPKEYARIAKEHASQAELVAKAREYVGALDDIEVAKEMQRETSDASEK 74 Query: 84 -ILQE--TSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139 +LQE ++ + LE E K L+ G+ D + +E+ AG GG E+ +A L Sbjct: 75 EMLQEDIGANEAKLPALEDEIKVM--LIPGDPNDEKNTIVEIRAGVGGDEAAIFAGDLYN 132 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+A K+KTE L E G K+ + G + +K E GVHR+ RI +S Sbjct: 133 MYARFASTHKWKTEVLSSSPSEAGGFKTIEFKVTGDKVFSVMKFESGVHRVQRIPKTESQ 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R TS +++ V P D+ I+IEI + D RIDTY ASG GGQ VNTT SAVRITH+PT Sbjct: 193 GRIQTSTATVAVLPEADE-IDIEIKDEDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNT 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VVQ Q +RSQ +N+A MLRA+LYE+EL+K++ A G + +IG G +IR+Y Sbjct: 252 VVQSQDQRSQIQNRAVCMEMLRARLYEVELEKQQ--AEQGAARLGQIGHGSRAEKIRTYN 309 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QP V D R T +L L + + A A ++ Sbjct: 310 -QPQDRVTDHRIGFNSTYNGVLLGDRLPEVIDALAAAER 347 >gi|160916055|ref|ZP_02078262.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991] gi|158431779|gb|EDP10068.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991] Length = 357 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS++A +E+ AGG E +A L RMY+++AE + ++ E +E+ D E G + ++ Sbjct: 108 DSHNAIVEIRGAAGGDEGNIFAGDLYRMYSKYAESQGWRIEIIEMDDCEAGGFSLVSFMV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG YG LK E G HR+ R+ +S R HTS +++ V P ++ + + +I +D I+T Sbjct: 168 KGDGVYGRLKFESGSHRVQRVPKTESQGRIHTSTATVLVTPEIE-AEDFDIDMNDLEIET 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQH+N TDSAVRI H PTG+VV+CQ RSQH+N+A A +R+++YE +K Sbjct: 227 MRASGAGGQHINKTDSAVRIVHKPTGIVVKCQDGRSQHENRATALMTIRSRVYEEHQRKL 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE + SK IG G +IR+Y P V D R +++G + D + A Sbjct: 287 EEEQGVERRSK--IGTGDRAEKIRTYNY-PQNRVTDHRIGYNVNQLDRIMEGRMQDLLDA 343 >gi|145218953|ref|YP_001129662.1| peptide chain release factor 1 [Prosthecochloris vibrioformis DSM 265] gi|189039984|sp|A4SCF1|RF1_PROVI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145205117|gb|ABP36160.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium phaeovibrioides DSM 265] Length = 357 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 105/294 (35%), Positives = 174/294 (59%), Gaps = 11/294 (3%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADSNDAYL 119 I+ +L D+ LL+ +++ ++++E + LQR LE E K L EADS + L Sbjct: 54 IKKQLEDSRQLLKNEQDQEMKALVEEEIEELQRQIPALEQEIKVL-LLPKDEADSRNVIL 112 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAY 178 E+ AG GG E+ + L RMY R+AEK+ + + L+ ++ G + AT+ I G + + Sbjct: 113 EIRAGTGGEEAALFTTDLFRMYQRYAEKQGWNFQMLDYNESSVPGGFREATISITGHDVF 172 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G +K E GVHR+ R+ ++ R HTS +S+ V P ++ +++EI + D R+DTYR+ G Sbjct: 173 GTMKYESGVHRVQRVPDTETQGRIHTSAASVAVLPEAEE-VDVEIRKEDLRLDTYRSGGK 231 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN ++AVRITH+PTG+V CQ+ERSQ +NK +A MLRAKL++++L ++++ Sbjct: 232 GGQNVNKVETAVRITHMPTGMVAACQEERSQLQNKERAMKMLRAKLFDIQLAEQQQAR-- 289 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +T + G +IR+Y P V D R + + G++ + + A Sbjct: 290 ADLRRTMVATGDRSAKIRTYNY-PQSRVTDHRIGFTTHALPQFMQGEIGELIDA 342 >gi|219670829|ref|YP_002461264.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2] gi|254790878|sp|B8FZ76|RF1_DESHD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219541089|gb|ACL22828.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2] Length = 355 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 144/242 (59%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A L RMYT++AE + ++TE L + G K LI Sbjct: 106 DDKNVIMEIRAGAGGEEAALFAGDLYRMYTKYAEHQGWRTELLSASYTDIGGFKEIIFLI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS +++ V P ++ +++ I+ +D RID Sbjct: 166 EGQGAYSKLKFESGVHRVQRVPTTESGGRIHTSTTTVAVLPEAEE-VDVAINPNDLRIDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVRITH+PTG VV CQ E+SQ KNK +A +LRA+L LE + Sbjct: 225 FCSSGPGGQSVNTTQSAVRITHVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQE 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + ++++G G +IR+Y P V D R + +L G+LD+ + A Sbjct: 283 EAMGELASERRSQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|118088382|ref|XP_419682.2| PREDICTED: similar to Mitochondrial translational release factor 1-like [Gallus gallus] Length = 394 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 139/224 (62%), Gaps = 7/224 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D++D +EV AG GG E+ + + + MY R+A +K+K E LE E G++ A Sbjct: 134 SEETDNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHA 193 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 I G +AY ++K E GVHR+ R+ + R HTS ++ + P + +E++I+ D Sbjct: 194 VASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-MELKINPKDL 252 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RI+T RASGAGGQHVNTTDSAVRI HIPTGV +CQQERSQ +NK +A ML AKLY ++ Sbjct: 253 RIETKRASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAMQMLCAKLYNIK 312 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329 L+ EE + K +IG GR +IR+Y P + D R + Sbjct: 313 LE--EENKKRNSARKIQIGTKGRSEKIRTYNF-PQDRITDHRIS 353 >gi|291514939|emb|CBK64149.1| bacterial peptide chain release factor 1 (bRF-1) [Alistipes shahii WAL 8301] Length = 361 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/236 (41%), Positives = 138/236 (58%), Gaps = 7/236 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A +E+ G GG E+ +A LLRMYT++ E + ++ E DG G K L + Sbjct: 111 DSKNAIVEIRGGTGGDEAAIFAGDLLRMYTKYIESKGWRYEITSSSDGAAGGFKEVVLKV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ +IEIS +D R D Sbjct: 171 SGQNVYGTLKYESGVHRVQRVPQTETQGRVHTSAASVAVLPEAEE-FDIEISMNDIRKDI 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + ASG GGQ VNTT SA+R+THIPTG+VVQCQ ++SQ KN +A+ LR +++ LE K Sbjct: 230 FCASGPGGQSVNTTYSAIRLTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKY 289 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + I KT + G +IR+Y P + D R N + + +DGD+ D Sbjct: 290 --LDEIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 342 >gi|39933683|ref|NP_945959.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009] gi|192289040|ref|YP_001989645.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1] gi|61214634|sp|Q6NC66|RF1_RHOPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229470355|sp|B3QCF6|RF1_RHOPT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|39647529|emb|CAE26050.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009] gi|192282789|gb|ACE99169.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1] Length = 361 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 110/296 (37%), Positives = 168/296 (56%), Gaps = 9/296 (3%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSG 110 L A+ ++++D L + LLE E + + E D L + E+ + +LL Sbjct: 45 LVEAVKSYRQVRDELGEIDELLEDPATEPEMRAMAEAERDALDAHRDELIQQIRIALLPK 104 Query: 111 EA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 +A D + LE+ AG GG E+ +A L RMY ++A + + E + +G G K Sbjct: 105 DAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGYKEII 164 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 +KG A+ LK E GVHR+ R+ ++ R HTS +++ V P V+D ++++I + D R Sbjct: 165 AEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVED-VDVDIKQDDLR 223 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 I+T RA GAGGQHVN T+SA+RITH+PTG+VV Q RSQHKN+A A N+LR+++Y+ E Sbjct: 224 IETMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAE- 282 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 Q+R + A E K ++G G +IR+Y P V D R N+ V+ G+ Sbjct: 283 QQRLDAARSAE-RKAKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGE 336 >gi|116494651|ref|YP_806385.1| peptide chain release factor 1 [Lactobacillus casei ATCC 334] gi|191638150|ref|YP_001987316.1| peptide chain release factor 1 [Lactobacillus casei BL23] gi|227535366|ref|ZP_03965415.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631748|ref|ZP_04674779.1| peptide chain release factor 1 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066209|ref|YP_003788232.1| protein chain release factor A [Lactobacillus casei str. Zhang] gi|122263928|sp|Q03A29|RF1_LACC3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238693030|sp|B3WDK7|RF1_LACCB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116104801|gb|ABJ69943.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus casei ATCC 334] gi|190712452|emb|CAQ66458.1| Peptide chain release factor 1 (RF-1) [Lactobacillus casei BL23] gi|227186962|gb|EEI67029.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526213|gb|EEQ65214.1| peptide chain release factor 1 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438616|gb|ADK18382.1| Protein chain release factor A [Lactobacillus casei str. Zhang] gi|327382180|gb|AEA53656.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus casei LC2W] gi|327385377|gb|AEA56851.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus casei BD-II] Length = 359 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 116/352 (32%), Positives = 191/352 (54%), Gaps = 21/352 (5%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD- 68 L GL D +Q L DP + + L +E + + ++ K+ + L D Sbjct: 8 LDGLLDRYEELQEL------MSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDI 61 Query: 69 --NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAG 124 + +L + ++D ++ +E ++LQ+ K ++E Q + L+ D + +E+ Sbjct: 62 KESEEVLRESKDDDMEALAKEDLEDLQKQKADLE-DQIKVLMLPKDPNDDKNIIMEIRGA 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A LL MY +AE++ +KTE ++ E G K ++I G N Y LK E Sbjct: 121 AGGDEASLFAGDLLNMYMHYAERQGWKTEIIDATPTEVGGYKEVVVMITGDNVYSKLKYE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +++ V P D+ ++++I D R D YR+SGAGGQHVN Sbjct: 181 NGAHRVQRVPVTESAGRVHTSTATVGVMPEYDE-VDLKIDPKDIRTDVYRSSGAGGQHVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSK 303 T SAVR+THIP+G+VV Q ERSQ +N+A+A +LR+++Y+ E Q +E+ ++ K Sbjct: 240 KTSSAVRMTHIPSGIVVSMQDERSQQENRARAMQILRSRVYDYYETQNQEK---YDQNRK 296 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IG G +IR+Y P V D R + +++G+LD+ + A + Sbjct: 297 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIV 347 >gi|66810982|ref|XP_639198.1| peptide chain release factor 1 [Dictyostelium discoideum AX4] gi|60467811|gb|EAL65826.1| peptide chain release factor 1 [Dictyostelium discoideum AX4] Length = 430 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 117/352 (33%), Positives = 189/352 (53%), Gaps = 24/352 (6%) Query: 18 NAVQRLSFLNTKTE------DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 N V RL+ + K++ D ++ E K + +E Q + + ++ ++L + Sbjct: 74 NIVFRLNLMGKKSKELRNMIDSNMGLGQSEIKKISKELQETAEPLGYFGDLIEKLKELKE 133 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEAD-SNDAYLEVHAGAG 126 L + +EE D Q ++ ++K E +E + SLL G D + DA LE+ AG G Sbjct: 134 LQTMLVEETDEDGKQMIKSDINKLKQEEIEPLEKQLLFSLLPGSKDDAGDAILEIRAGTG 193 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G+E+Q + + MY + ++ + E LE+ E G + T+ + G +G+LK E G Sbjct: 194 GSEAQLFTQDVYEMYRSYCLQKGWTFEPLELSVTEVGGYRDVTVSVSGKGVFGFLKYESG 253 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS ++ + P D ++I+I + D ++D YR+SG GGQ VNTT Sbjct: 254 VHRVQRVPLTETQGRIHTSTITVAILPEPKD-VDIQIHDRDLKVDIYRSSGNGGQSVNTT 312 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---LQKR---EEIANIGE 300 DSAVRITH+PTG+ V Q ERSQH+N+++A +L+A++YE E LQ E A IG Sbjct: 313 DSAVRITHLPTGITVAMQDERSQHQNRSKAMKILKARIYERERIRLQNERVSERNAQIGS 372 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + ++E +IR+Y P + D R +I S + LD F+ L Sbjct: 373 ALRSE-----RIRTYNY-PQDRITDHRVSINGNLNSCMNSDGLDSFIDEILV 418 >gi|254457086|ref|ZP_05070514.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1] gi|207085878|gb|EDZ63162.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1] Length = 355 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/236 (41%), Positives = 143/236 (60%), Gaps = 7/236 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ + L YTR+AE + +K E L + G K LI Sbjct: 104 DDRNIIVELRAGAGGDEAAIFVGDLFDAYTRYAEVKGWKVELLSTSPSDAGGFKEVIALI 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G+HR+ R+ +S R HTS ++ V P VDD +E+ I+E+D +ID Sbjct: 164 KGDQVYSRLKYEGGIHRVQRVPETESQGRVHTSAITVAVMPEVDD-VEVVINENDLKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITH+PTG+VV Q ++SQHKNK +A +L+A+LY+LE+Q+ Sbjct: 223 MRSSGCGGQSVNTTDSAVRITHLPTGLVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQEA 282 Query: 293 EEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + + E+ ++G G +IR+Y P + D R + +++++G L D Sbjct: 283 Q--SKDSEARLAQVGSGDRSGRIRTYNY-PQNRMSDHRITLTLYRLNEIMNGGLLD 335 >gi|312890071|ref|ZP_07749615.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter paludis DSM 18603] gi|311297603|gb|EFQ74728.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter paludis DSM 18603] Length = 357 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 147/240 (61%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A +E+ G GG E+ +A L RMY R+ EK+ +KTE ++ +G G K + Sbjct: 106 DSRNAIVEIRGGTGGDEAALFAGDLYRMYIRFCEKQGWKTELVDFTEGTAGGYKEIVFNV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +AYG LK E GVHR+ R+ ++ R HTS +S+ V P D+ +++I +D R D Sbjct: 166 LAEDAYGTLKYESGVHRVQRVPDTETQGRVHTSAASVVVLPEADE-FDVDIHVNDIRKDL 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + ASG GGQ VNTT SAVR+TH+PTG+V QCQ ++SQ KN +A +LR+++YE+ELQK Sbjct: 225 FCASGPGGQSVNTTYSAVRLTHLPTGIVAQCQDQKSQLKNYDKALQVLRSRIYEMELQKH 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ I + KT + G +IR+Y P V + R + + +V++G+L + M+A Sbjct: 285 LEV--ISKKRKTMVSTGDRSAKIRTYNY-PQGRVTEHRIGLTIYNLPEVMNGNLLEIMEA 341 >gi|15611143|ref|NP_222794.1| peptide chain release factor 1 [Helicobacter pylori J99] gi|7388059|sp|Q9ZMZ0|RF1_HELPJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|4154581|gb|AAD05656.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Helicobacter pylori J99] Length = 352 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 175/299 (58%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ +LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K +LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|47459025|ref|YP_015887.1| peptide chain release factor 1 [Mycoplasma mobile 163K] gi|61214626|sp|Q6KIA0|RF1_MYCMO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|47458353|gb|AAT27676.1| peptide chain release factor 1 [Mycoplasma mobile 163K] Length = 358 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 117/331 (35%), Positives = 183/331 (55%), Gaps = 21/331 (6%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE---LALEEDDCSILQETS 89 P ++ N+ E + +E +N+IS I E ++ N ++ + L+E D ++ Sbjct: 26 PEVFNNIKEYTKISKE----NNSISEIVENFNKFLINEQTIKDAKILLDEKDEEMVSFAK 81 Query: 90 DNLQRIKLEVEYKQFES------LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + + K E+E ++ E L E D + +E+ AGG E+ +A LL+MY + Sbjct: 82 NEIH--KSELENQELEKKLRILILPKDENDERNVIIEIRGAAGGDEANIFAGDLLKMYNK 139 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WA+ K K + L+ + G T L++G AY LK E GVHR+ RI ++ R H Sbjct: 140 WADINKMKLKLLDYANASSGGFSQVTFLVEGDKAYSKLKFESGVHRVQRIPVTETQGRVH 199 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ V P VDD E+EI+ D +IDT+R+SG GGQ VNTTDSAVRITH+P+G+VV Sbjct: 200 TSTTTVTVMPEVDDVAEVEINPVDLKIDTFRSSGPGGQSVNTTDSAVRITHLPSGIVVSS 259 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR--QIRSYVLQPYQ 321 Q E+SQ N+ A +L++KLY+LE++KR E G+ K R +IR+Y P Sbjct: 260 QDEKSQISNRESALKILKSKLYDLEIKKRNE--ETGKFRKLAGSGARSEKIRTYNY-PQD 316 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + D R TS ++G +++ ++A A Sbjct: 317 RITDHRIGFS-TSLKIAMEGKINNIIEALHA 346 >gi|23012458|ref|ZP_00052537.1| COG0216: Protein chain release factor A [Magnetospirillum magnetotacticum MS-1] Length = 361 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 95/242 (39%), Positives = 146/242 (60%), Gaps = 8/242 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AG GG E+ +A L RMY ++AE + ++ E + +G G + Sbjct: 108 ADEKSAILEIRAGTGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAE 167 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KG + + LK E G HR+ R+ ++ R HTS +++ V P ++ +++ I+E+D +ID Sbjct: 168 VKGRSVFSRLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAEE-VDVVINEADLKID 226 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RA GAGGQHVN T+SA+RITH+PTGVVV Q+ERSQHKN+A+A +LRA+L++ E Sbjct: 227 TMRAQGAGGQHVNKTESAIRITHLPTGVVVFVQEERSQHKNRARAMALLRARLFDAERSA 286 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 ++ + K ++G G +IR+Y P V D R N+ +V+ G LD+ + Sbjct: 287 KD--SARAADRKAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGPALDEVI 343 Query: 348 KA 349 A Sbjct: 344 DA 345 >gi|315077778|gb|EFT49829.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA2] Length = 361 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 119/347 (34%), Positives = 186/347 (53%), Gaps = 28/347 (8%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D +RL + T+ D + + L + L + +S + D+L ++ E Sbjct: 10 DEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 EED L+ ++ L R +L++ + LL S D DA +E+H+G GG ES +A Sbjct: 69 TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191 LLRMYTR+AE+ + L + G ++ + + G P+ AYG+LK E GVHR+ Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302 +TH+PTG+V CQ ERSQ +NKA+A MLRAK+ E + +R+++ + S+ Sbjct: 245 LTHLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +R+Y ++ D R + +L GDL D + A Sbjct: 305 R--------VRTYNFSENRLT-DHRIGYKSRKLDQILAGDLGDVLDA 342 >gi|86134218|ref|ZP_01052800.1| peptide chain release factor 1 [Polaribacter sp. MED152] gi|85821081|gb|EAQ42228.1| peptide chain release factor 1 [Polaribacter sp. MED152] Length = 358 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 89/232 (38%), Positives = 141/232 (60%), Gaps = 3/232 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +E+ AG GG E+ +A L RMYT++ E + +K ++ +G G K + Sbjct: 106 DAKNAVVELRAGTGGDEASIFAGDLFRMYTKYCESKGWKVSTVDYSEGTNGGFKEIQFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS ++ V+P ++ ++EI+ D RID Sbjct: 166 NGDDVYGILKFEAGVHRVQRVPQTETQGRVHTSAATCMVFPEAEE-FDVEINPKDVRIDF 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K+ Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKK 284 Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 + + S G +IR+Y + V D R + ++++GD+ Sbjct: 285 QAEDALKRGSMVSSGDRSAKIRTYNYAQGR-VTDHRIGLSLYDLPNIMNGDI 335 >gi|319650894|ref|ZP_08005031.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2] gi|317397492|gb|EFV78193.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2] Length = 357 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 115/347 (33%), Positives = 185/347 (53%), Gaps = 12/347 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD +V+ R LN DP + + + + +E+ + + KE++++ D Sbjct: 1 MFDRLQSVEDRYERLNELLSDPEIVNDPKKLREYSKEQSGIQETVDTYREYKEVKEQYQD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 +LE L+ + +++E L+ K ++E + L+ + D + +E+ AGG Sbjct: 61 ARAMLEEKLDAEMREMVKEELAELEERKEDLEARLKILLIPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +K + +E G K +I G AY LK E G Sbjct: 121 DEAALFAGDLYRMYSRYAETQGWKIDVIEASSTGVGGYKEIIFMINGNGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ +EI+I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG VV CQ E+SQ KNK +A +LRA++Y+ Q E A + K+ +G Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYDQQRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + +L G LD+ + A + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDEVIDALI 343 >gi|257785108|ref|YP_003180325.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469] gi|257473615|gb|ACV51734.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469] Length = 355 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 104/240 (43%), Positives = 142/240 (59%), Gaps = 9/240 (3%) Query: 107 LLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 L+ G+ D D +E+ AG GG E+ +A L +MY R+AE R +KTE L E G Sbjct: 99 LIPGDPNDEKDTIVEIRAGVGGDEAAIFAGDLFKMYERFAEARGWKTEILSSSPSEAGGF 158 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ + G Y +K E GVHR+ R+ +S R TS +++ V P D+ I+I+I++ Sbjct: 159 KTIEFKVTGDKVYSVMKYESGVHRVQRVPKTESQGRIQTSTATVAVLPEADE-IDIQINQ 217 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTY ASG GGQ VNTT SAVRITH+PT VVQ Q +RSQ +N+ MLRA+LY Sbjct: 218 EDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLY 277 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 E+EL++++ A G ++IG G +IR+Y QP V D R T + VL GD Sbjct: 278 EMELERQQ--AEQGAERLSQIGHGARSEKIRTYN-QPQDRVTDHRVGFNGTY-NGVLLGD 333 >gi|256827314|ref|YP_003151273.1| peptide chain release factor 1 [Cryptobacterium curtum DSM 15641] gi|256583457|gb|ACU94591.1| bacterial peptide chain release factor 1 (bRF-1) [Cryptobacterium curtum DSM 15641] Length = 357 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 109/301 (36%), Positives = 165/301 (54%), Gaps = 21/301 (6%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRLCDNLILLELALEEDD 81 L T+ DP + + E L +E H A +++++I D L E D Sbjct: 17 LQTRMSDPAVISDQKEYNRLAKEYAHQGPLATAARTYVQDIDD-------LAEAKEMISD 69 Query: 82 CSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 + + + + RI+ E+ + +F + + AD D +E+ AGAGG E+ +A L Sbjct: 70 ADMREFAQEEITRIENELPGLEDDIKFMLIPADPADDKDIIVEIRAGAGGDEAALFAGDL 129 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +MY+ +A+ + +K E L E G K +KG Y +K E GVHR+ R+ + Sbjct: 130 FKMYSHFADVKGWKIEVLNASASEAGGYKEIQFKVKGDKVYSEMKFESGVHRVQRVPKTE 189 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS +++ V P D+ +E+++ + D RID YRA G GGQ VNTTDSAVRITH+PT Sbjct: 190 SQGRIHTSTATVAVLPEADE-VEVDVKQEDLRIDVYRAGGPGGQCVNTTDSAVRITHLPT 248 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+VVQ Q ++SQ +NK A +LRA+LYE L+ E+ A G + +IG G +IR+ Sbjct: 249 GLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLE--EQRAAEGAERRAQIGTGDRSEKIRT 306 Query: 315 Y 315 Y Sbjct: 307 Y 307 >gi|296199479|ref|XP_002747187.1| PREDICTED: peptide chain release factor 1-like, mitochondrial [Callithrix jacchus] Length = 382 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/246 (43%), Positives = 142/246 (57%), Gaps = 9/246 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY R+A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEMFDMYQRYAAFKRWHFETLEYFPSEIGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMKKLRAKLYSMH 299 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343 L+ EE + K +IG GR +IR+Y P V D R + + GD L Sbjct: 300 LE--EETNKRDNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRISKSLHDLQTFMQGDYLL 356 Query: 344 DDFMKA 349 D+ +++ Sbjct: 357 DELVQS 362 >gi|319957818|ref|YP_004169081.1| bacterial peptide chain release factor 1 (brf-1) [Nitratifractor salsuginis DSM 16511] gi|319420222|gb|ADV47332.1| bacterial peptide chain release factor 1 (bRF-1) [Nitratifractor salsuginis DSM 16511] Length = 355 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 111/305 (36%), Positives = 171/305 (56%), Gaps = 28/305 (9%) Query: 61 EIQDRLCDNLILL------ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 EI + + +N +L ELA EE L E L R++ E++ +L D Sbjct: 54 EISEAIEENKAMLSDPEFGELAKEE-----LSELEPQLPRLEEEIK------VLMIPKDP 102 Query: 115 ND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 ND YLE+ AGAGG ES + + +MY R+AE++ +K E + +G G K L Sbjct: 103 NDDKNIYLELRAGAGGDESALFVEDMFKMYLRFAERQGWKVEIVSSSEGTAGGYKELIAL 162 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KG Y LK E G HR+ R+ ++ R HTS ++ V P V+D +EI+I ++ ++D Sbjct: 163 VKGEGVYSKLKFEAGTHRVQRVPATETQGRVHTSAITVAVIPEVED-VEIDIKPNEIKMD 221 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YR+SG GGQ VNTTDSAVR+TH+PTG+VV Q E+SQHKN+ +A +L+A+++E + Sbjct: 222 VYRSSGCGGQSVNTTDSAVRLTHLPTGIVVAIQDEKSQHKNRDKAMKVLKARVHEAMM-- 279 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFM 347 RE++ K ++G G +IR+Y P + D R + + DV+ +G L+ + Sbjct: 280 REQMEETAGQRKLQVGSGDRSEKIRTYNY-PQNRITDHRIGLTLYALDDVMNNGTLEQVI 338 Query: 348 KATLA 352 +A Sbjct: 339 DPLIA 343 >gi|21223720|ref|NP_629499.1| peptide chain release factor 1 [Streptomyces coelicolor A3(2)] gi|256785187|ref|ZP_05523618.1| peptide chain release factor 1 [Streptomyces lividans TK24] gi|289769080|ref|ZP_06528458.1| peptide chain release factor 1 [Streptomyces lividans TK24] gi|20139352|sp|Q9K4E4|RF1_STRCO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|8568782|emb|CAB94531.1| peptide chain release factor 1 (RF-1) [Streptomyces coelicolor A3(2)] gi|289699279|gb|EFD66708.1| peptide chain release factor 1 [Streptomyces lividans TK24] Length = 358 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 104/251 (41%), Positives = 146/251 (58%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERIGWKTEIIDSTESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ I++ Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-IDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D RID YR+SG GGQ VNTTDSAVRITHIPTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L ++ E+ A S+ + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEEAEKEAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 GDLD ++A + Sbjct: 337 GDLDSVIQACV 347 >gi|86609051|ref|YP_477813.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)] gi|119361626|sp|Q2JL68|RF1_SYNJB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|86557593|gb|ABD02550.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 360 Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 99/244 (40%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L RMYTR+AEK + + +GE G K A L I Sbjct: 112 DDKNIMLEIRAGTGGEEAALWAADLARMYTRYAEKLGWSVRLASLSEGELGGYKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ ++ R HTS +++ V P VD+ +E+ I D I T Sbjct: 172 QGDQVYSKLKFEAGVHRVQRVPVTEAQGRVHTSTATVAVMPEVDE-VEVVIDPKDIEIKT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C +ERSQ +N+ +A +LRAKLYE++LQ Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQ-- 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A+I + + ++G G +IR+Y + + V D R N + +LDG+LDD ++A Sbjct: 289 EQQASISSARRMQVGTGSRSEKIRTYNYKDNR-VTDHRLN-QNFPLQPILDGELDDLIQA 346 Query: 350 TLAI 353 + + Sbjct: 347 CIGL 350 >gi|148266072|ref|YP_001232778.1| peptide chain release factor 1 [Geobacter uraniireducens Rf4] gi|189039974|sp|A5G8T7|RF1_GEOUR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146399572|gb|ABQ28205.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter uraniireducens Rf4] Length = 355 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 90/237 (37%), Positives = 141/237 (59%), Gaps = 7/237 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ LE+ AG GG E+ +A L RMY R+AE +++ E + + E+ G K + Sbjct: 103 DNKSVILEIRAGTGGDEAALFAGDLFRMYGRYAESNRWRVEVISASESEKGGFKEIVASV 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + LK E G HR+ R+ ++ R HTS ++ + P +D ++I+I+ +D +ID Sbjct: 163 EGDGVFAKLKYESGTHRVQRVPETEAQGRIHTSACTVAIMPEAED-VDIDINPADLKIDV 221 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ+ERSQ KN+A+A +L+ ++ + +Q Sbjct: 222 YRSSGAGGQHVNTTDSAVRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIMQ-- 279 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+ A + K ++G G +IR+Y P + D R + ++ GD+ + Sbjct: 280 EQSARLAADRKQQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIGEI 335 >gi|302759765|ref|XP_002963305.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii] gi|300168573|gb|EFJ35176.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii] Length = 927 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 117/313 (37%), Positives = 176/313 (56%), Gaps = 27/313 (8%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQ 103 + +E + LD ++ IK ++ + + + L EL E +D + + S LQ EV Q Sbjct: 51 MNKELRKLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQ 110 Query: 104 FESLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + LL EADS GAGG E+ +A+ L +MY ++ ++ E L I Sbjct: 111 HDVLLELIPKDEADSR--------GAGGDEASIFASDLFKMYEKYTANNSWRFEVLSITT 162 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 + G K A+ +I G YG LK E GVHR+ R+ + R HTS +S+ + P ++ + Sbjct: 163 TDTRGYKEASAVISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANE-V 221 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 ++EI + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV Q ERSQHKNKA+A ++ Sbjct: 222 DVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSI 281 Query: 280 LRAKLYELELQK----REEIA--NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 L A+LYELE + R E+ IG S ++E +IR+Y P V D + + + Sbjct: 282 LYARLYELERSRAAASRSELRQDQIGSSDRSE-----RIRTYNF-PQGRVTDHQVGVTQH 335 Query: 334 SPSDVLDG-DLDD 345 + +++G D+D+ Sbjct: 336 AIEQIMEGIDVDN 348 >gi|297585440|ref|YP_003701220.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10] gi|297143897|gb|ADI00655.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10] Length = 356 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 142/242 (58%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +EV AGG E+ +A L RMY R+AE + +KT+ +E + G K I Sbjct: 106 DDKNVIVEVRGAAGGDEAALFAGDLYRMYHRYAESQGWKTDVIEASETGIGGYKEIVFTI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E G HR+ R+ +S R HTS +++ V P +D +E++ISE D R+D Sbjct: 166 NGTGAYSKMKFENGAHRVQRVPATESGGRIHTSTATVAVLPEAED-VEVDISEKDIRVDR 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH PTG+VV CQ E+SQ KNK +A +LRA++Y + +R Sbjct: 225 FASSGPGGQSVNTTMSAVRLTHEPTGIVVSCQDEKSQIKNKEKAMKVLRARIY--DKYQR 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A E+ K+ +G G +IR+Y P V D R + +L+G LD+ ++A Sbjct: 283 EAQAEYDENRKSAVGTGDRSERIRTYNF-PQSRVTDHRIGLTIQKLDQILEGKLDEIIEA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|317179883|dbj|BAJ57669.1| peptide chain release factor 1 [Helicobacter pylori F32] Length = 352 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 174/299 (58%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ +LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|297568589|ref|YP_003689933.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2] gi|296924504|gb|ADH85314.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2] Length = 357 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 95/242 (39%), Positives = 146/242 (60%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ + L RMY+R+AE+ +K E L + G K LI Sbjct: 106 DEKNVLLEIRAGTGGDEAALFVADLFRMYSRYAEQLGWKVETLSSNPIGIGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E GVHR+ R+ ++ R HTS ++ V P ++ +E++I+ S+ + D Sbjct: 166 SGEHVYSRLKYESGVHRVQRVPATETQGRVHTSAVTVAVLPEAEE-VELKINPSELKFDV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQHKNKA+A +LRA+L L+ ++ Sbjct: 225 FRSSGPGGQSVNTTDSAVRVTHLPTGLVVSCQDEKSQHKNKAKALQVLRARL--LDKLQQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ I K+++G G ++R+Y P + + R N+ DV+ G LD+ ++ Sbjct: 283 EQHDQISSDRKSQVGSGDRSERVRTYNF-PQNRLTEHRINLTIYRLDDVMMGHLDEVVEP 341 Query: 350 TL 351 + Sbjct: 342 LM 343 >gi|184200614|ref|YP_001854821.1| peptide chain release factor 1 [Kocuria rhizophila DC2201] gi|238689221|sp|B2GLX4|RF1_KOCRD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183580844|dbj|BAG29315.1| peptide chain release factor 1 [Kocuria rhizophila DC2201] Length = 369 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 103/248 (41%), Positives = 144/248 (58%), Gaps = 8/248 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LEV AG GG ES +A LLRMY R+AE+ KTE L E G K L + Sbjct: 100 DGRNVILEVKAGEGGDESALFAGDLLRMYMRFAEQSGLKTEILSSTPTELGGYKDVQLAV 159 Query: 173 KG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG P+ W K E GVHR+ R+ +S R HTS + + V+P VD+ EI+IS++ Sbjct: 160 KGSSSDPSEGAWARFKYEGGVHRVQRVPVTESQGRVHTSAAGVLVFPEVDEPDEIDISQN 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ A +LRA+L Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHVPTGIVVSMQNEKSQLQNREAAMRVLRARLLA 279 Query: 287 LELQKRE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + ++ + E A +S + +IR+Y P + D RT + + VLDG L+ Sbjct: 280 HQQEQIDAENAAARKSQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDHVLDGALEP 338 Query: 346 FMKATLAI 353 + + + + Sbjct: 339 VIASAVEL 346 >gi|163846084|ref|YP_001634128.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl] gi|222523819|ref|YP_002568289.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl] gi|189039962|sp|A9WE79|RF1_CHLAA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790872|sp|B9LJ02|RF1_CHLSY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|163667373|gb|ABY33739.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl] gi|222447698|gb|ACM51964.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl] Length = 360 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 124/358 (34%), Positives = 189/358 (52%), Gaps = 32/358 (8%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD AV R L P + NV + RE++ +++ ++ +E Q Sbjct: 1 MFDKLAAVAARYDELTELMAQPEVATNVTLLQQYAREQREIEDIVNAYREYQ-------- 52 Query: 72 LLELALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEA---------DSNDAYL 119 + A+EE + ++L+++ L+ + +LE + K+ SL DS D + Sbjct: 53 ATQRAIEEAE-AMLEDSDPELRALAQEELETQRKRLASLEEQLKLLLLPRDPNDSKDVIM 111 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ G GG E+ +A L RMYTR+AE R +K E + + GIK I G AY Sbjct: 112 EIRQGEGGDEAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYS 171 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E GVHR+ R+ ++ R HTS +++ V P V+++ EIEI D RID +R++G G Sbjct: 172 QLKYEGGVHRVQRVPATEARGRIHTSTATVAVLPEVEET-EIEIKPEDLRIDVFRSAGHG 230 Query: 240 GQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GQ VNTTDSAVRI + P +VV CQ RSQ +N+ +A +LRA+LY E +KR+ Sbjct: 231 GQGVNTTDSAVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQR-- 288 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IG S ++G G +IR+Y P + D R ++ VLDG+LD ++A + Sbjct: 289 EIGASRLAQVGSGERAEKIRTYNF-PQDRITDHRIGQNFSNLPAVLDGELDKIIEALI 345 >gi|292620387|ref|XP_002664272.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Danio rerio] gi|220679232|emb|CAX12803.1| novel protein similar to H.sapiens MTRF1L, mitochondrial translational release factor 1-like (MTRF1L) [Danio rerio] Length = 431 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 112/266 (42%), Positives = 156/266 (58%), Gaps = 19/266 (7%) Query: 59 IKEIQDRLCDN-LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSN 115 ++++QD L DN LLELA E + ++L + D Q+I SLL E+D + Sbjct: 127 MEDMQDLLKDNDPELLELA-ETEKEAVLADIQDLRQKIL---------SLLIPEEESDMS 176 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + LEV AG GG E+ + + MY +A + + LE + E G++ A+ + GP Sbjct: 177 ELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASVSGP 236 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 +Y LK E GVHR+ R+ +S R HTS ++ + P + I I+ D +I+T RA Sbjct: 237 LSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTE-ISFTINPKDLKIETKRA 295 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTTDSAVRITH+PTG V +CQQERSQ KNK A +LRAKLY L+ EE Sbjct: 296 SGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSARLE--EET 353 Query: 296 ANIGESSKTEIGW-GR--QIRSYVLQ 318 + ++ K +IG GR +IR+Y Q Sbjct: 354 SRRYQARKLQIGTRGRSEKIRTYNFQ 379 >gi|300088066|ref|YP_003758588.1| peptide chain release factor 1 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527799|gb|ADJ26267.1| peptide chain release factor 1 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 356 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 111/329 (33%), Positives = 189/329 (57%), Gaps = 19/329 (5%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE-EDDCSILQETSD 90 DP + ++ L +ER ++ I + + R +L E LE E D + + + Sbjct: 21 DPSVATDITLLTRLAKERASMEALIGMYRRYK-RNEQSLTEAEQMLETETDEEMRELAKE 79 Query: 91 NLQRIKLEVE--YKQFE-SLLSGEADS-NDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 ++R+K E E Y+Q + +LL + ++ + +E+ AG GG E++ +A L RMYTR+AE Sbjct: 80 EVKRLKQEQEELYEQLKIALLPKDPNAERNIIIEIRAGTGGDEAKLFAGDLFRMYTRYAE 139 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K E +++ + K A I G + Y LK E GVHR+ R+ +++ R HTS Sbjct: 140 LKGWKVEIIDLTEQSGGTFKEAVFEIDGEDVYSRLKYESGVHRVQRVPVTEASGRIHTST 199 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +++ V PV +D IE++I D RID Y + GAGGQ+VN +AVR+TH+P+G+VV CQ+E Sbjct: 200 ATVAVMPVAED-IEVDIKPEDLRIDIYHSGGAGGQNVNKVATAVRMTHLPSGLVVACQEE 258 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPY 320 RSQ KN+ +A ++L+A+L +E +K+++ A +G + ++E +IR+Y P Sbjct: 259 RSQLKNRQKAMSVLKARLLAMEQEKQDKEMTDNRRAQVGSADRSE-----KIRTYNY-PQ 312 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + D R + + +++G LDD + A Sbjct: 313 DRLTDHRIGLSVHNLPKIMEGYLDDIIDA 341 >gi|328907544|gb|EGG27310.1| peptide chain release factor 1 [Propionibacterium sp. P08] Length = 361 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 104/270 (38%), Positives = 155/270 (57%), Gaps = 24/270 (8%) Query: 94 RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R +L++ + LL S D DA +E+H+G GG ES +A LLRMYTR+AE+ + Sbjct: 83 RGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYTRYAERVGWS 142 Query: 152 TEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 L + G ++ + + G P+ AYG+LK E GVHR+ R+ +S+ R HTS Sbjct: 143 VRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 202 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD++ E++I +D R+D YR+SG GGQ VNTTDSAVR+TH+PTG+V CQ ERS Sbjct: 203 VLVMPDVDET-EVDIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVASCQNERS 261 Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q +NKA+A MLRAK+ E + +R+++ + S++ +R+Y P Sbjct: 262 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 312 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + D R + +L GDL + + A Sbjct: 313 ENRLTDHRIGYKSRKLDQILAGDLGEVLDA 342 >gi|91217382|ref|ZP_01254342.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755] gi|91184490|gb|EAS70873.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755] Length = 358 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 90/236 (38%), Positives = 147/236 (62%), Gaps = 3/236 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +EV AGAGG E+ +A + RM +++ E + +K + ++ ++G G K + Sbjct: 106 DAKNAVVEVRAGAGGDEASIFAGDIFRMLSKYCEHKGWKVDVVDYNEGTNGGYKEIQFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS +++ V+P ++ +IE++ + R+D Sbjct: 166 SGDDVYGTLKYEAGVHRVQRVPQTETQGRVHTSAATVMVFPEAEE-FDIEVNPKEVRVDY 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LYE+EL K+ Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHEPTGIVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKK 284 Query: 293 E-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E A S T +IR+Y + V D R N+ ++++GDL+ + Sbjct: 285 QAEDAEKRGSMVTSGDRSAKIRTYNYSQSR-VTDHRINLTLYDLDNIINGDLEKII 339 >gi|22331914|ref|NP_191850.2| APG3 (ALBINO AND PALE GREEN); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|19699096|gb|AAL90914.1| AT3g62910/T20O10_10 [Arabidopsis thaliana] gi|21928033|gb|AAM78045.1| AT3g62910/T20O10_10 [Arabidopsis thaliana] gi|34392768|dbj|BAC82693.1| Chloroplast Release Factor 1 [Arabidopsis thaliana] gi|332646889|gb|AEE80410.1| Peptide chain release factor 1 [Arabidopsis thaliana] Length = 422 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 107/339 (31%), Positives = 192/339 (56%), Gaps = 15/339 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82 L+ K DP + N E + L + LD ++ + +D +L ++ +L + A +++D Sbjct: 71 LSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDM 130 Query: 83 SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + + + N ++E KQ + LL S D+ + LEV AG GG E+ W L+RM Sbjct: 131 AEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRM 190 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R++E+ +K + + E G K+ + IKG Y LK E GVHR+ R+ ++ Sbjct: 191 YQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQG 250 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ + P D+ +E+ I D + + R+ GAGGQ+VN ++A+ + H P+G+ Sbjct: 251 RVHTSTATVAIMPEADE-VEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIR 309 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 + C +ER+Q +NKA+A+ +LRAKLYE+++++++E I K+++G G +IR+Y Sbjct: 310 IFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERKSQVGTGARSEKIRTYNY 367 Query: 318 QPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++ L+ N T+ LDG L+D ++A A+++ Sbjct: 368 KDSRVTDHRLKMNFALTT---FLDGALEDAVQACAALEQ 403 >gi|149744102|ref|XP_001501636.1| PREDICTED: similar to Mitochondrial translational release factor 1-like [Equus caballus] Length = 380 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 134/224 (59%), Gaps = 7/224 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E + ND LEV AG GG E+ + + + MY R+A +++ E LE E G++ A Sbjct: 121 SEETNENDLILEVTAGVGGQEAMLFTSEIFDMYQRYAAFKRWHFETLEYFPSEIGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ A LRAKLY + Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMH 299 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329 ++ EE + + K +IG GR +IR+Y P V D R N Sbjct: 300 VE--EETSKRYNARKVQIGTKGRSEKIRTYNF-PQNRVTDHRIN 340 >gi|323490903|ref|ZP_08096098.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2] gi|323395383|gb|EGA88234.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2] Length = 359 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 114/347 (32%), Positives = 184/347 (53%), Gaps = 12/347 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +FD +V+ R LN DP + + + + +E+ L + +E +D +L + Sbjct: 1 MFDRLQSVEDRYDRLNELLSDPDIVSDTNKLRDYSKEQSDLQETVETYREYKDLTTQLTE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 + + ++ D +++E + L++ VE + + L+ + D + +E+ AGG Sbjct: 61 AKAMFDEKMDADMREMVKEEVNELEQQVSVVEERLHKLLIPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE +K + ++ + G K +I G AY +K E G Sbjct: 121 DEAALFAGDLYRMYTRFAESNGWKIQVMDSNPTGLGGFKEIVFMITGKGAYSKMKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P V++ +E++I E+D R DTY +SGAGGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEVEE-VEVDIHENDIRTDTYASSGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PT VV CQ E+SQ KNKA A +LRA++YE Q E A K+ +G Sbjct: 240 SAVRLTHLPTNTVVTCQDEKSQIKNKASAMKVLRARVYEKFQQ--EAQAEYDAVRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + +L G +D+ + A + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKMDEIVDALI 343 >gi|256825643|ref|YP_003149603.1| peptide chain release factor 1 [Kytococcus sedentarius DSM 20547] gi|256689036|gb|ACV06838.1| bacterial peptide chain release factor 1 (bRF-1) [Kytococcus sedentarius DSM 20547] Length = 357 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 142/242 (58%), Gaps = 9/242 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---- 174 LEV AG GG ES +A+ L+RMY R AE+R + LE + G+K A + I+ Sbjct: 106 LEVKAGEGGQESALFAHELVRMYLRHAERRGWAATVLESTASDLGGVKDARVAIRARGAG 165 Query: 175 -PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 P W LK E GVHR+ R+ +S R HTS + V P VDD E+EI+ +D ++D Sbjct: 166 EPGDAPWARLKFEGGVHRVQRVPVTESQGRIHTSAVGVLVLPEVDDPGEVEIAPADLKVD 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YR+SG GGQ VNTTDSAVR+TH+PTGVVV CQ E+SQ +NK A +L ++L + L++ Sbjct: 226 VYRSSGPGGQSVNTTDSAVRLTHLPTGVVVTCQNEKSQLQNKEAALRVLASRLRRMALEE 285 Query: 292 RE-EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + E++ + + ++R+Y P V D RT + + VLDGDLD + + Sbjct: 286 AQAEVSQARRAQVRTVDRSERVRTYNF-PESRVSDHRTGYKAHNLPAVLDGDLDAVIDSL 344 Query: 351 LA 352 +A Sbjct: 345 VA 346 >gi|297679452|ref|XP_002817544.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like isoform 1 [Pongo abelii] Length = 380 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 108/245 (44%), Positives = 139/245 (56%), Gaps = 17/245 (6%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRQA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 299 Query: 289 LQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 L+ KR+ I SK G +IR+Y P V D R N KT DL+ Sbjct: 300 LEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRIN--KTL------HDLE 347 Query: 345 DFMKA 349 FM+ Sbjct: 348 TFMRG 352 >gi|316932075|ref|YP_004107057.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1] gi|315599789|gb|ADU42324.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1] Length = 361 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/296 (37%), Positives = 167/296 (56%), Gaps = 9/296 (3%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSG 110 L A+ ++++D L + LLE E + + E D L + E+ + +LL Sbjct: 45 LVEAVKSYRQVRDELGEIDELLEDPATEPEMRAMAEAERDALDAHRDELIQQIRIALLPK 104 Query: 111 EA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 +A D + LE+ AG GG E+ +A L RMY ++A + + E + +G G K Sbjct: 105 DAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEII 164 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 +KG A+ LK E GVHR+ R+ ++ R HTS +++ V P V+D ++++I + D R Sbjct: 165 AEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVED-VDVDIKQEDLR 223 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 I+T RA GAGGQHVN T+SA+RITH+PTG+VV Q RSQHKN+A A N+LR+++Y+ E Sbjct: 224 IETMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAER 283 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 Q R + A E K ++G G +IR+Y P V D R N+ V+ G+ Sbjct: 284 Q-RVDAARSAE-RKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGE 336 >gi|291527966|emb|CBK93552.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium rectale M104/1] Length = 358 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 113/328 (34%), Positives = 180/328 (54%), Gaps = 11/328 (3%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLILLELALEEDDCSIL-QE 87 +P + + K LM+E+ L + K E + + D+L +L+ +E+ + +E Sbjct: 21 EPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIEDSLAILDEESDEEMRELAKEE 80 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 D+ ++++ + + L D + +E+ AGAGG E+ +A + RMY +AE Sbjct: 81 LKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGGEEAALFAAEIYRMYVHYAEN 140 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R +K E L+ + G+KS ++KG AY LK E GVHR+ R+ +S R TS Sbjct: 141 RGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGVHRVQRVPETESQGRIQTSTC 200 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S+ V P +D + RID RASG GGQ VNTTDSAVR+TH P+G+V+ Q E+ Sbjct: 201 SVAVMPEAEDVDVKIDDKDI-RIDVMRASGNGGQCVNTTDSAVRLTHYPSGIVIYSQTEK 259 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQ +NK +A+ +LR KLY++ELQK+++ E +++IG G +IR+Y P V Sbjct: 260 SQIQNKEKAFALLRTKLYDMELQKKQDAE--AEERRSQIGTGDRAEKIRTYNF-PQGRVT 316 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R N+ +L+GD+ + + A +A Sbjct: 317 DHRINLTLYKLDKILNGDIQEIIDACIA 344 >gi|254387523|ref|ZP_05002762.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC 27064] gi|294815090|ref|ZP_06773733.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC 27064] gi|326443452|ref|ZP_08218186.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC 27064] gi|197701249|gb|EDY47061.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC 27064] gi|294327689|gb|EFG09332.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC 27064] Length = 356 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 104/248 (41%), Positives = 145/248 (58%), Gaps = 10/248 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LEV AGAGG ES +A LLRMY R+AE+ +KTE + + E G K + Sbjct: 99 SDDKDVILEVKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIINSTESELGGYKDVQVA 158 Query: 172 IK-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ I++EI+ Sbjct: 159 VKTKGNAEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-IDVEIN 217 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L Sbjct: 218 PNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRL 277 Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ E+ A S+ + +IR+Y P + D R + + VLDGDL Sbjct: 278 LAAAQEEAEKEAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDL 336 Query: 344 DDFMKATL 351 D ++A + Sbjct: 337 DAVIQACV 344 >gi|320109111|ref|YP_004184701.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4] gi|319927632|gb|ADV84707.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4] Length = 355 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 104/298 (34%), Positives = 166/298 (55%), Gaps = 11/298 (3%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 KE+ + + D +L + D + +E L K E+E + LL + DS + Sbjct: 51 FKEVMNGIADAHTML---ADPDMKEMAEEELSTLMPRKTEIEEELKIMLLPKDPNDSKNV 107 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 LE+ AG GG E+ +A + RMY R+AE+ ++K E L +G G+K T + +G Sbjct: 108 VLEIRAGTGGDEAALFAEEMFRMYLRFAEQHRWKVEVLSEREGAVGGMKEVTAIFEGDQV 167 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E GVHR+ R+ ++ R HTS ++ V P ++ ++++I D RIDT+ +SG Sbjct: 168 YSQLKYESGVHRVQRVPATETQGRVHTSAITVAVLPEAEE-VDVKIEAKDLRIDTFCSSG 226 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTT SA+RITH+PT VV CQ E+SQ KN+ +A +LR++LYE+E+++ ++ Sbjct: 227 PGGQSVNTTYSAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERVHQLQ- 285 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + K ++G G +IR+Y P + D R + V++G L + A +A Sbjct: 286 -ATARKAQVGSGDRSEKIRTYNF-PQNRLTDHRIGLTLHQLEYVMEGKLQPVVDALIA 341 >gi|27375329|ref|NP_766858.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110] gi|32171530|sp|Q89XT9|RF1_BRAJA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|27348465|dbj|BAC45483.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110] Length = 361 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 100/241 (41%), Positives = 144/241 (59%), Gaps = 8/241 (3%) Query: 106 SLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +LL +A D + LE+ AG GG E+ +A L RMY R+A + +K E + +G G Sbjct: 100 ALLPKDAMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGG 159 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K ++G A+ LK E GVHR+ R+ ++ R HTS +++ V P V+D ++++I Sbjct: 160 YKEIIAEVQGRGAFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVED-VDVDIK 218 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D RI+T RA GAGGQHVN T+SA+RITHIPTG+VV Q RSQHKN+A A N+LR+++ Sbjct: 219 NDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRI 278 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E Q R + A E K ++G G +IR+Y P V D R N+ V+ G Sbjct: 279 YDAERQ-RVDAARSAE-RKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAG 335 Query: 342 D 342 + Sbjct: 336 E 336 >gi|302842492|ref|XP_002952789.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f. nagariensis] gi|300261829|gb|EFJ46039.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f. nagariensis] Length = 415 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 95/244 (38%), Positives = 152/244 (62%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGAGG E+ WA ++RMY R+A ++ +K + GE G K L I Sbjct: 161 DDRNIMLEIRAGAGGDEASIWAGDMMRMYQRYANRQGWKASLVSCTQGESGGYKEVILEI 220 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E GVHR+ R+ ++ R HTS +++ V P V+D ++++I+ S+ + Sbjct: 221 SGTSVYSKLKWEAGVHRVQRVPATEAAGRVHTSTATVAVMPEVED-VDVQINPSEIEVKF 279 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQ+VN ++AV + H PTG+ V CQ+ER+Q +NK +A+ +LRAKLYE+E+Q++ Sbjct: 280 ARASGAGGQNVNKVETAVDLMHKPTGIRVFCQEERTQAQNKERAFQILRAKLYEMEIQRQ 339 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP----SDVLDGDLDDFMK 348 + A I + K+++G G RS ++ Y KD R + + + VL+GDL+D ++ Sbjct: 340 Q--AEIYAARKSQVGTGD--RSEKIKTYNY-KDSRVSDHRIKQNFDLNSVLEGDLEDSLQ 394 Query: 349 ATLA 352 A ++ Sbjct: 395 AMIS 398 >gi|194468250|ref|ZP_03074236.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23] gi|194453103|gb|EDX42001.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23] Length = 362 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 116/348 (33%), Positives = 187/348 (53%), Gaps = 14/348 (4%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68 +FD AV R LN DP + + +E L + + K++ + D Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKFSKEEGSLRETVEKYNQYKKVTQTISD 65 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAG 126 + LL ++D ++ +E + + ++E K+ E LL D + +E+ AG Sbjct: 66 DEELLRETNDDDLTALTKEELAEAREEQAQLE-KELEVLLIPKDPNDDKNIIMEIRGAAG 124 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY R+AEK+ +K E ++ ++ E G K L+I G Y LK E G Sbjct: 125 GDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENG 184 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P +D ++++I D R+D YR+SGAGGQHVN T Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVGVMPEAED-VDVDIDPKDIRVDVYRSSGAGGQHVNKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ Q++E+ A + K I Sbjct: 244 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDY-YQQQEQSA-YDQKRKDAI 301 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G G +IR+Y P V D R + ++ GDLD+ ++A + Sbjct: 302 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALI 348 >gi|242280071|ref|YP_002992200.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638] gi|259585219|sp|C6BYQ4|RF1_DESAD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|242122965|gb|ACS80661.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638] Length = 357 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 91/243 (37%), Positives = 143/243 (58%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMY+R+AE +K E + + G K I Sbjct: 105 DGKNIILEIRAGTGGEEAALFAADLFRMYSRFAESNGWKVEVMNSNPTGTGGFKEIIAAI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y +K E G HR+ R+ ++ R HTS +++ + P ++ +++++ D RID Sbjct: 165 SGSRIYSMMKYESGTHRVQRVPATETQGRIHTSAATVAIMPEAEE-VDVQVRNEDLRIDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASG GGQ VNTTDSA+RITH+PTG+VV CQ E+SQHKNKA+A +L ++L + E K+ Sbjct: 224 FRASGPGGQSVNTTDSAIRITHLPTGLVVICQDEKSQHKNKAKAMKVLCSRLLQAEQDKQ 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 A + E + ++G G +IR+Y P V D R N+ V++GD+ + +++ Sbjct: 284 H--AEMAEQRRAQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDAVIEGDMQELVES 340 Query: 350 TLA 352 ++ Sbjct: 341 LIS 343 >gi|114609863|ref|XP_518818.2| PREDICTED: mitochondrial translational release factor 1-like isoform 6 [Pan troglodytes] Length = 380 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 106/247 (42%), Positives = 140/247 (56%), Gaps = 11/247 (4%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 299 Query: 289 LQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-- 342 L+ KR+ I SK G +IR+Y P V D R N + GD Sbjct: 300 LEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYL 355 Query: 343 LDDFMKA 349 LD+ +++ Sbjct: 356 LDELVQS 362 >gi|119383645|ref|YP_914701.1| peptide chain release factor 1 [Paracoccus denitrificans PD1222] gi|166223583|sp|A1B0G1|RF1_PARDP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119373412|gb|ABL69005.1| bacterial peptide chain release factor 1 (bRF-1) [Paracoccus denitrificans PD1222] Length = 351 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD+ A LE+ G GG E+ +A LL MY R+AE + ++ + LE+ + G++ A Sbjct: 101 ADARPAILEIRPGTGGEEAALFAGDLLDMYRRFAESQGWQFQMLELVRSDLGGVREAMAR 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G + LK E GVHR+ R+ +S R HTS +++ V P ++ ++++I +D RID Sbjct: 161 IEGEGVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAEE-VDVDIPAADIRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+A A +LRA+LY++E + Sbjct: 220 TMRASGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHQNRANAMAVLRARLYDMERSR 278 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + A K+++G G +IR+Y P + D R + + ++ G++ + ++ Sbjct: 279 AD--AERAADRKSQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYALDRIMQGEIGEIVE 335 Query: 349 ATLA 352 A A Sbjct: 336 ALAA 339 >gi|328954736|ref|YP_004372069.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium glomerans PW2] gi|328455060|gb|AEB06254.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium glomerans PW2] Length = 355 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 121/326 (37%), Positives = 174/326 (53%), Gaps = 16/326 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS-- 83 L K DP + + E L +E + + ++ + D E+ EE D Sbjct: 15 LEKKLSDPAVMGDQKEYTRLAKEHANQADLVAMARAYVTAYDDIEAAKEMLHEETDAQSK 74 Query: 84 --ILQETSDNLQRIK-LEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLR 139 +L + S+N +I LE E K L+ G+ D + +E+ + AGG E+ +A L + Sbjct: 75 AMLLADISENEAKIPGLENEIKVM--LIPGDPNDEKNTIMEIRSAAGGDEAAIFAGDLFK 132 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ E ++K E L E G KS + G Y +K E GVHR+ RI +S Sbjct: 133 MYERFFEAHRWKMELLSASPSEAGGFKSIEFKVSGDKVYSLMKYESGVHRVQRIPKTESQ 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R TS +++ V P D+ I+I+I + D RIDTY ASG GGQ VNTT SAVRITH+PT Sbjct: 193 GRIQTSTATVAVLPEADE-IDIKIDQGDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNT 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VVQ Q++RSQ +N+ MLRA+LYE EL++++ A +G +++IG G +IR+Y Sbjct: 252 VVQSQEQRSQIQNREVCMQMLRARLYERELEQQQ--AELGAERQSQIGRGNRSEKIRTYN 309 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD 342 QP V D R T + VL GD Sbjct: 310 -QPQDRVTDHRIGFSSTY-NGVLLGD 333 >gi|94271210|ref|ZP_01291905.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1] gi|93450530|gb|EAT01680.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1] Length = 354 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 118/337 (35%), Positives = 185/337 (54%), Gaps = 19/337 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQH---LDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L + DP + + + L +E H L+ + ++ D L N LL+ EEDD Sbjct: 15 LEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEANGQLLQ---EEDDP 71 Query: 83 SIL----QETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 IL QE + QR+ +L+ E + + D + LE+ AG GG E+ + L Sbjct: 72 EILELARQEGEELRQRLAQLDKELR-LALVPPDPNDEKNILLEIRAGTGGDEASLFVANL 130 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+R+AE+ +K E L E G K LI G + + LK E GVHR+ R+ + Sbjct: 131 FRMYSRYAEQLGWKVEVLSSSTTEVGGYKEIIALISGDHVFSRLKYESGVHRVQRVPETE 190 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + R HTS ++ V P ++ +E+ I+ ++ + D +R+SG GGQ VNTTDSAVR+TH+PT Sbjct: 191 TQGRVHTSAVTVAVLPEAEE-VELSINPAELKYDVFRSSGPGGQSVNTTDSAVRVTHLPT 249 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+VV CQ E+SQHKNKA+A +LRA+L L+ ++++ + K+++G G +IR+ Sbjct: 250 GLVVICQDEKSQHKNKAKALQVLRARL--LDQMQQQQHDQMSSDRKSQVGSGDRSERIRT 307 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y P + D R N+ DV+ G LD+ ++ + Sbjct: 308 YNF-PQNRLTDHRINLTSYRLEDVMLGRLDEVIEPLM 343 >gi|314927458|gb|EFS91289.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1] Length = 388 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 104/270 (38%), Positives = 155/270 (57%), Gaps = 24/270 (8%) Query: 94 RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R +L++ + LL S D DA +E+H+G GG ES +A LLRMYTR+AE+ + Sbjct: 110 RGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYTRYAERVGWS 169 Query: 152 TEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 L + G ++ + + G P+ AYG+LK E GVHR+ R+ +S+ R HTS Sbjct: 170 VRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 229 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD++ E++I +D R+D YR+SG GGQ VNTTDSAVR+TH+PTG+V CQ ERS Sbjct: 230 VLVMPDVDET-EVDIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVASCQNERS 288 Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q +NKA+A MLRAK+ E + +R+++ + S++ +R+Y P Sbjct: 289 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 339 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + D R + +L GDL + + A Sbjct: 340 ENRLTDHRIGYKSRKLDQILAGDLGEVLDA 369 >gi|229551967|ref|ZP_04440692.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1] gi|229314702|gb|EEN80675.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1] Length = 386 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 114/355 (32%), Positives = 191/355 (53%), Gaps = 12/355 (3%) Query: 6 QLNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 Q + + +F+ D + R L DP + + L +E + + ++ K+ + Sbjct: 24 QEDFMDKIFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQ 83 Query: 65 RLCD---NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLE 120 L D + +L + +ED ++ +E ++LQ+ K ++E K +L + D + +E Sbjct: 84 VLSDIKESEEVLRESKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIME 143 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGG E+ +A LL MY +AE++ +K E ++ E G K ++I G N Y Sbjct: 144 IRGAAGGDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSK 203 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E G HR+ R+ +S R HTS +++ V P D+ ++++I D R D YR+SGAGG Sbjct: 204 LKYENGAHRVQRVPVTESAGRVHTSTATVGVMPEYDE-VDLKIDPKDIRTDVYRSSGAGG 262 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T SAVR+THIPTG+VV Q ERSQ +N+A+A +LR+++Y+ + +E + Sbjct: 263 QHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQE--KYDQ 320 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + K IG G +IR+Y P V D R + +++G+LD+ + A + Sbjct: 321 NRKNAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIV 374 >gi|289812362|ref|ZP_06542991.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 288 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 82/161 (50%), Positives = 111/161 (68%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K I Sbjct: 128 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 187 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RIDT Sbjct: 188 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDT 247 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNK Sbjct: 248 FRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNK 288 >gi|281345517|gb|EFB21101.1| hypothetical protein PANDA_018665 [Ailuropoda melanoleuca] Length = 379 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D+ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ V P + I + I+ D Sbjct: 181 SASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ A LRAKLY + Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMY 299 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329 L+ EE + + K ++G GR +IR+Y P V D R N Sbjct: 300 LE--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRIN 340 >gi|302759937|ref|XP_002963391.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii] gi|300168659|gb|EFJ35262.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii] Length = 412 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 119/354 (33%), Positives = 194/354 (54%), Gaps = 28/354 (7%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD--RLCDNLI--- 71 D+A Q L K DP + + E + L + ++ ++ ++ ++ R D+L Sbjct: 60 DSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEMI 119 Query: 72 -------LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L E+A+EE +IL+E NL+ EY + L S DS + LEV AG Sbjct: 120 KSSGDKELAEMAVEES--AILKENITNLE------EYLKVLLLPSDPLDSRNIMLEVRAG 171 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG E+ WA L+RMY ++AE+ ++ + + E+ G K L I G Y LK E Sbjct: 172 TGGDEAGIWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYE 231 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS +++ + P VD+ +E+ I D + T R+ GAGGQ+VN Sbjct: 232 SGVHRVQRVPATESQGRVHTSTATVAIMPEVDE-VEVVIDPKDIELTTARSGGAGGQNVN 290 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 ++AV + H PTG+ + C +ER+Q KNKA+A+ +LRAKLYE++L +++E I ++ Sbjct: 291 KVETAVDLFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQE--KISSQRRS 348 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++G G +IR+Y + + V D RT I S L G+++ ++A A+++ Sbjct: 349 QVGTGARSEKIRTYNYKDNR-VSDHRTKINFDLDS-FLSGNIESAVQACAAVEQ 400 >gi|295134987|ref|YP_003585663.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87] gi|294983002|gb|ADF53467.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87] Length = 358 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 89/232 (38%), Positives = 139/232 (59%), Gaps = 3/232 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +E+ AG GG E+ +A L RMYT++ E + + ++ +G G K + Sbjct: 106 DAKNVVMEIRAGTGGDEASIFAGDLYRMYTKYVESKGWSHNIVDFSEGTSGGFKEMIFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG +K E GVHR+ R+ ++ R HTS +++ V P ++ ++EI D RID Sbjct: 166 SGEDVYGTMKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVEIDPKDVRIDY 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKN+ +A+ +LR++LYE+EL K+ Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHEPTGLVAQCQDQKSQHKNREKAFRVLRSRLYEIELAKK 284 Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 E +S G +IR+Y P V D R N+ S++++GD+ Sbjct: 285 MEADAAKRNSMVSSGDRSAKIRTYNY-PQGRVTDHRINLTLYDLSNIVNGDI 335 >gi|313899685|ref|ZP_07833188.1| peptide chain release factor 1 [Clostridium sp. HGF2] gi|312955300|gb|EFR36965.1| peptide chain release factor 1 [Clostridium sp. HGF2] Length = 357 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 18/291 (6%) Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---------YKQFESLL--SGEADSNDAYLEVHAG 124 ALE+ +L++ + + K+E+E ++ E LL DS++A +E+ Sbjct: 60 ALEDAKALLLEDDKEIKEMAKMEIEELEPKIEEYLEKLEILLIPKDPNDSHNAIVEIRGA 119 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E +A L RMY+++AE + +K E +E+ D E G + ++KG YG LK E Sbjct: 120 AGGDEGNIFAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKFE 179 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +++ V P ++ + +I +D ++T RASGAGGQH+N Sbjct: 180 SGSHRVQRVPKTESQGRIHTSTATVLVTPEIEPE-DFDIDMNDLEMETMRASGAGGQHIN 238 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVRI H PTG+ V+CQ RSQH+N+A A +R+++YE +K EE I +K Sbjct: 239 KTDSAVRIVHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGIERRNK- 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IG G +IR+Y P V D R +++G + D + A L+ Sbjct: 298 -IGTGDRAEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLS 346 >gi|301786516|ref|XP_002928673.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Ailuropoda melanoleuca] Length = 380 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 135/224 (60%), Gaps = 7/224 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D+ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ V P + I + I+ D Sbjct: 181 SASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ A LRAKLY + Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMY 299 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329 L+ EE + + K ++G GR +IR+Y P V D R N Sbjct: 300 LE--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRIN 340 >gi|291276374|ref|YP_003516146.1| peptide chain release factor 1 [Helicobacter mustelae 12198] gi|290963568|emb|CBG39400.1| peptide chain release factor 1 [Helicobacter mustelae 12198] Length = 352 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 110/301 (36%), Positives = 174/301 (57%), Gaps = 22/301 (7%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA- 117 I++++D + ++ L +A EE +L+E + NL+ + ++LL + D ND Sbjct: 59 IRDLEDLILEDKALAGMAKEE--LEVLRERAKNLE--------ESIKTLLIPK-DPNDGK 107 Query: 118 --YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 YLE+ AG GG E+ + L R Y R+A+ +K+K E + + G K LIKG Sbjct: 108 NIYLELRAGTGGDEAGIFVGDLFRAYCRYADLKKWKVEIISSSENNVGGYKEIIALIKGE 167 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 Y LK E G HR+ R+ +S R HTS ++ + P VD+ +E+ ++ SD RI+ +RA Sbjct: 168 GVYSRLKFESGTHRVQRVPATESQGRIHTSAITVALMPEVDE-VEVVLNPSDLRIEVFRA 226 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQ VNTTDSAVRITHIPTG+ V Q E+SQHKNK +A +LR+++Y+ ++++ +++ Sbjct: 227 GGHGGQCVNTTDSAVRITHIPTGINVSIQDEKSQHKNKEKALKILRSRIYDAQMEQ-QQV 285 Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATL 351 N ++ K ++G G +IR+Y P + D R + S +V L G+LD + Sbjct: 286 QN-AQTRKNQVGSGDRSERIRTYNY-PQNRLTDHRIGLTLYSLEEVMLSGNLDPIIDPLT 343 Query: 352 A 352 A Sbjct: 344 A 344 >gi|256372571|ref|YP_003110395.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM 10331] gi|256009155|gb|ACU54722.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM 10331] Length = 357 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 115/336 (34%), Positives = 178/336 (52%), Gaps = 30/336 (8%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP ++Q+ A+ + R + L+ + ++ +Q L + D L + Sbjct: 22 DPAIFQDQRRAREVARRHKELEAIVGALRRVQ----------ALEGDRDAARELYRGASP 71 Query: 92 LQRIKLEVEYKQFESLLSGE----------ADSNDA---YLEVHAGAGGTESQDWANMLL 138 +R +L+ E + ++ L+ +D ND LE+ GG E+ +A L Sbjct: 72 AEREELKAELDEIDAALARAREALELLLLPSDPNDGRAVILEIRGAEGGEEANLFAKDLA 131 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 MY RWA++R +K E L + G TLL++G +A+ LK E G HR+ R+ ++ Sbjct: 132 DMYERWADRRSWKVEVLSRSVSDLGGYDDVTLLVRGDDAWKRLKHEAGPHRVQRVPVTET 191 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS +++ P D+ IE+ I SD RID YR++G GGQ VNTTDSAVRITH+PTG Sbjct: 192 QGRVHTSSATVTALPEADE-IEVSIDPSDLRIDVYRSTGPGGQSVNTTDSAVRITHLPTG 250 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSY 315 +VV Q E+SQ +N+A+A +LRA+L +LE KR+ A + + K +I G +IR+Y Sbjct: 251 IVVAMQDEKSQIQNRAKALQVLRARLLKLEQDKRQ--AELTATRKAQIRSGGRSEKIRTY 308 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + V D R + +L GDLD+ A L Sbjct: 309 NFKENR-VTDHRIGLTLYRLDQILQGDLDELSDALL 343 >gi|325971906|ref|YP_004248097.1| peptide chain release factor 1 [Spirochaeta sp. Buddy] gi|324027144|gb|ADY13903.1| Peptide chain release factor 1 [Spirochaeta sp. Buddy] Length = 354 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 116/336 (34%), Positives = 188/336 (55%), Gaps = 11/336 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++L+ ++ K P Q++ K L +ER HL I ++ + + +L EE Sbjct: 10 KQLADIDEKLSRPETMQDMKLYKSLNQERSHLAPIIDQLQLMHSLQTQIIGAHQLMKEET 69 Query: 81 DCSILQET--SDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANM 136 D +L+ T + +LEV K+ + LL + D +E+ AG GG E+ +A Sbjct: 70 DQEMLEMTREELHELENELEVCEKKTKMLLIPPDPLEGKDIIMEIRAGTGGEEAALFAAN 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY+ +A+++ +K E L ++ G K + I G + YG L+ E GVHR+ R+ Sbjct: 130 LFRMYSHYADEKGWKMEILSSNETGIGGYKELVISISGKDVYGSLRWESGVHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS ++ V P +++ +IEI + D +ID RA G GGQ VNTTDSAVR+TH+P Sbjct: 190 ESGGRIHTSAVTVAVLPEAEET-DIEIRQEDLKIDVMRAGGPGGQCVNTTDSAVRLTHLP 248 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV CQ E+SQ KN+A+A +LR++L++LE K+ E+ K+++G G +IR Sbjct: 249 TGLVVICQDEKSQIKNRAKALRVLRSRLFDLEEDKKNR--ERAEARKSQVGSGDRSERIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +Y P + D R N+ +++G LD+ ++ Sbjct: 307 TYNF-PQNRLTDHRINLTLYKLELIMEGQLDEVVEG 341 >gi|88810851|ref|ZP_01126108.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231] gi|88792481|gb|EAR23591.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231] Length = 362 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 97/238 (40%), Positives = 146/238 (61%), Gaps = 6/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +LE+ AG GG E+ +A L RMY R+AE+R+++ E + GE G K + Sbjct: 109 DEKGIFLEIRAGTGGDEAALFAGDLFRMYARYAERRRWRLEIINEAPGEHGGYKEIISRV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E G HR+ R+ +S R HTS ++ V P + EIE + ++ R+DT Sbjct: 169 EGAGVYSRLKFESGAHRVQRVPTTESQGRIHTSACTVAVLPEPEQIEEIETATAELRVDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+A+A +L+AKL E +++ Sbjct: 229 FRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMGLLQAKLTARERERQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++ + + ++ +G G +IR+Y P V + R + ++L+GDLD + Sbjct: 289 QQEQSA--TRRSLVGSGDRSERIRTYNF-PQSRVTEHRVGLTLYKLDEILEGDLDPII 343 >gi|308182253|ref|YP_003926380.1| peptide chain release factor 1 [Helicobacter pylori PeCan4] gi|308064438|gb|ADO06330.1| peptide chain release factor 1 [Helicobacter pylori PeCan4] Length = 352 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 174/299 (58%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ +LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|257064123|ref|YP_003143795.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia heliotrinireducens DSM 20476] gi|256791776|gb|ACV22446.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia heliotrinireducens DSM 20476] Length = 352 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 99/247 (40%), Positives = 142/247 (57%), Gaps = 13/247 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD D +E+ AGG E+ +A L +MY R+ E +++K E +++ E G K Sbjct: 102 ADEKDIIVEIRGAAGGDEAAIFAGDLYKMYARFCESQRWKIETMDVSASEAGGYKEIQFK 161 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KG + Y +K E GVHR+ R+ +S R HTS +++ V P D+ I++EI+E+D RID Sbjct: 162 VKGDHVYSLMKFESGVHRVQRVPKTESQGRIHTSTATVAVLPEADE-IDVEINENDLRID 220 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YRA G GGQ VNTTDSAVRITH+P+G+VVQ Q ++SQ +NK A +LR++LYE L + Sbjct: 221 VYRAGGPGGQCVNTTDSAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRSRLYEKMLAE 280 Query: 292 R------EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + E +A IG + E +IR+Y P V D R T +L L D Sbjct: 281 QQAAEGAERLAQIGSGDRAE-----KIRTYNA-PQDRVTDHRIGYNGTYNGVLLGDGLGD 334 Query: 346 FMKATLA 352 + A A Sbjct: 335 LITALQA 341 >gi|86570230|gb|ABD04787.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas palustris HaA2] Length = 373 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 110/304 (36%), Positives = 168/304 (55%), Gaps = 25/304 (8%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS---------DNLQRIKLEVEYK 102 L A+ +E++D L D LLE + + + E D +Q+I++ Sbjct: 57 LVEAVKAYREVRDELGDIDDLLEDPATDPEMRAMAEAERDALDAHREDLIQQIRV----- 111 Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 +LL +A D + LE+ AG GG E+ +A L RMY ++A + + E + +G Sbjct: 112 ---ALLPKDAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGT 168 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K +KG A+ LK E GVHR+ R+ ++ R HTS +++ V P V++ +++ Sbjct: 169 VGGFKEIIAEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEE-VDV 227 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 +I D +IDT RA GAGGQHVN T+SA+RITH+PTG+VV Q RSQHKN+A A N+LR Sbjct: 228 DIKPDDLKIDTMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILR 287 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +++Y+ E Q+R + A E K ++G G +IR+Y P V D R N+ V Sbjct: 288 SRIYDAE-QQRIDSARSAE-RKQKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQV 344 Query: 339 LDGD 342 + G+ Sbjct: 345 IAGE 348 >gi|312897943|ref|ZP_07757356.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359] gi|310620977|gb|EFQ04524.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359] Length = 361 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 96/241 (39%), Positives = 151/241 (62%), Gaps = 8/241 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLL 171 D + +E+ GAGG E+ +A L RMY+++ EK+K +K + + E G K Sbjct: 107 DDKNVIMEIRGGAGGDEAAIFAGDLFRMYSKYIEKQKGWKASIISSNAPELGGYKEVIFS 166 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 ++G YG LK E GVHR+ R+ +S R HTS +++ V P +D +EI ++ D R+D Sbjct: 167 VEGDGVYGKLKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEAED-VEINLNMEDVRVD 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +RASGAGGQHVN T SAVR+THIP+G+VV+CQ ERSQ +N+A+A +L+A+L L + Sbjct: 226 YFRASGAGGQHVNKTSSAVRMTHIPSGIVVECQDERSQLENRAKAVRVLKARL--LAQAE 283 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E A + E+ ++++G G ++R+Y P V D R N+ ++++GD+D+F++ Sbjct: 284 EEANAEVTEARRSQVGTGDRSERVRTYNY-PQGRVTDHRINLTLYKLENIMNGDIDEFIQ 342 Query: 349 A 349 A Sbjct: 343 A 343 >gi|325105445|ref|YP_004275099.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter saltans DSM 12145] gi|324974293|gb|ADY53277.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter saltans DSM 12145] Length = 358 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 112/312 (35%), Positives = 174/312 (55%), Gaps = 19/312 (6%) Query: 44 MLMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 +++ E N +S I +D L + + L E+A EE D ++ E + +I+L + Sbjct: 43 LIVDEYYKYKNVVSNIATNKDILANEKDQELREMAKEELDV-LIPEKEEMEAKIRLMLVP 101 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 K D DA +E+ G GG E+ +A L RMYTR+ E + ++TE LE+ DG Sbjct: 102 KD-------PGDEKDAIVEIRGGTGGDEAAIFAGDLYRMYTRYCEGKGWRTEVLEVTDGT 154 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K + G + YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ +++ Sbjct: 155 NGGYKEVVFKVSGEDVYGTLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAEE-VDV 213 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D + T R+ GAGGQ+VN ++ V++TH PTG+VV CQ ERSQ N+ +A MLR Sbjct: 214 EINPADIEMQTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQVERSQLGNRERAMEMLR 273 Query: 282 AKLYELELQK-REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +KLYE EL K EEIA+ KT + G +IR+Y P V + R + + Sbjct: 274 SKLYERELAKYNEEIAS---KRKTMVSTGDRSAKIRTYNY-PQGRVTEHRIGLTLYNLPA 329 Query: 338 VLDGDLDDFMKA 349 V++G++ + + A Sbjct: 330 VMNGEIQEILDA 341 >gi|332213665|ref|XP_003255945.1| PREDICTED: peptide chain release factor 1-like, mitochondrial isoform 1 [Nomascus leucogenys] Length = 380 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 106/247 (42%), Positives = 140/247 (56%), Gaps = 11/247 (4%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 299 Query: 289 LQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-- 342 L+ KR+ I SK G +IR+Y P V D R N + GD Sbjct: 300 LEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRINRTLHDLETFMQGDYL 355 Query: 343 LDDFMKA 349 LD+ +++ Sbjct: 356 LDELVQS 362 >gi|270291033|ref|ZP_06197256.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4] gi|304385309|ref|ZP_07367654.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM 20284] gi|270280429|gb|EFA26264.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4] gi|304328516|gb|EFL95737.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM 20284] Length = 359 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 111/312 (35%), Positives = 171/312 (54%), Gaps = 24/312 (7%) Query: 47 RERQHLDNAISFIKEIQ----DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 RE + + ++I+ +E+Q D D+L+ ELA D Q+ KLE E K Sbjct: 51 REYRKVVDSIAENEELQREKLDPEMDSLVKAELADLRD------------QKEKLEEEIK 98 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 L D + +E+H AGG E+ +A L MYTR+AE + +K + ++ + + Sbjct: 99 VL-MLPKDPNDDKNIIMEIHGAAGGDEASLFAADLYNMYTRYAESQGWKVQIVDENATDV 157 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K L+I G Y LK E G HR+ R+ +S R HTS +++ V P +D ++IE Sbjct: 158 GGFKEIVLMISGDKVYSKLKYENGAHRVQRVPVTESAGRVHTSTATVGVMPEAED-VDIE 216 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I D R D YR+SGAGGQH+N T SAVR+TH+PTG+VV Q ERSQ +N+ +A +L+A Sbjct: 217 IDPKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNREKAMRILKA 276 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++Y+ + E+ N E K +G G +IR+Y P V D R + V+ Sbjct: 277 RVYDYYQSQEEDAYN--EERKNAVGTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVM 333 Query: 340 DGDLDDFMKATL 351 +G+L++ ++A + Sbjct: 334 NGELNEIIEALI 345 >gi|298209284|ref|YP_003717463.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559] gi|83849211|gb|EAP87080.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559] Length = 358 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 93/232 (40%), Positives = 141/232 (60%), Gaps = 3/232 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A +EV AG GG E+ +A + RM T++ E + + ++ +G G K + Sbjct: 106 DSKNAVVEVRAGTGGDEASIFAGDIYRMLTKFCESKGWNCSTVDFSEGTSGGFKEIQFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS +++ V+P ++ ++EI D RID Sbjct: 166 SGDDVYGTLKYEAGVHRVQRVPQTETQGRVHTSAATVMVFPEAEE-FDVEIDPKDVRIDY 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QK 291 + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL +K Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKK 284 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +EE A S T +IR+Y + V D R N+ +++DGD+ Sbjct: 285 QEEDAAKRGSMVTSGDRSAKIRTYNYAQGR-VTDHRINLTIYDLQNIIDGDI 335 >gi|326915756|ref|XP_003204179.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Meleagris gallopavo] Length = 393 Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 99/226 (43%), Positives = 138/226 (61%), Gaps = 7/226 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L+ E ++D +EV AG GG E+ + + + MY R+A +K+K E LE E G++ Sbjct: 131 LIPSEETNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLR 190 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A I G +AY ++K E GVHR+ R+ + R HTS ++ + P + +E++I+ Sbjct: 191 HAVASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-MELKINPK 249 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RI+T RASGAGGQHVNTTDSAVRI HIPTGV +CQQERSQ +NK +A ML AKLY Sbjct: 250 DLRIETKRASGAGGQHVNTTDSAVRIVHIPTGVASECQQERSQIRNKEKAMQMLCAKLYN 309 Query: 287 LELQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329 ++L+ EE K +IG GR +IR+Y P + D R + Sbjct: 310 IKLE--EETKKRNSVRKIQIGTKGRSEKIRTYNF-PQDRITDHRIS 352 >gi|207091639|ref|ZP_03239426.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_AG0C1] Length = 352 Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|299132853|ref|ZP_07026048.1| peptide chain release factor 1 [Afipia sp. 1NLS2] gi|298592990|gb|EFI53190.1| peptide chain release factor 1 [Afipia sp. 1NLS2] Length = 358 Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 104/272 (38%), Positives = 158/272 (58%), Gaps = 17/272 (6%) Query: 76 ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDW 133 A+ E + +L E ++L Q+I++ +LL +A D + LE+ AG GG E+ + Sbjct: 75 AMAESERPVLLERQESLEQQIRV--------ALLPKDAMDERNVVLEIRAGTGGDEASLF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMY R+A + +K E + +G G K ++G A+ LK E GVHR+ R+ Sbjct: 127 AGDLFRMYERFAALQGWKVEVMSASEGTMGGYKEIVAEVQGRGAFAKLKFESGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +++ R HTS +++ V P +D ++I+I +SD RI+T RA GAGGQHVN T+SA+RIT Sbjct: 187 PDTEASGRIHTSAATVAVLPEAED-VDIDIKDSDLRIETMRAQGAGGQHVNKTESAIRIT 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG+VV Q RSQHKN+A A N+LR+++ + E Q+ A + ++G G Sbjct: 246 HIPTGIVVMMQDSRSQHKNRASAMNILRSRVLDGERQR--AAAERSADRRGQVGSGDRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y P V D R N+ V+ G+ Sbjct: 304 RIRTYNF-PQGRVTDHRINLTLYKLPQVIAGE 334 >gi|227498082|ref|ZP_03928255.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM 15434] gi|226832520|gb|EEH64903.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM 15434] Length = 366 Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 102/249 (40%), Positives = 141/249 (56%), Gaps = 9/249 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +EV AG GG ES +A+ L RMYTR+AE+ + E L+ D + G K L + Sbjct: 107 DARDVIIEVKAGEGGEESALFASDLARMYTRYAERMGWAVEVLDATDSDLGGYKDVRLAV 166 Query: 173 KGPNA-------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K +A + LK E GVHR+ R+ +S R HTS + + V P VDD E+EI Sbjct: 167 KARSAVEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEVDDPGELEIDP 226 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +NK A +LRA+L Sbjct: 227 NDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAALRVLRARLL 286 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + S+ + +IR+Y P + D RT + + S VLDGDL Sbjct: 287 AERAAQAAAEEAEARRSQVRTVDRSERIRTYNF-PENRITDHRTGYKAYNLSTVLDGDLG 345 Query: 345 DFMKATLAI 353 + + +A+ Sbjct: 346 PVIDSAIAM 354 >gi|199597587|ref|ZP_03211016.1| Protein chain release factor A [Lactobacillus rhamnosus HN001] gi|258508166|ref|YP_003170917.1| peptide chain release factor 1 [Lactobacillus rhamnosus GG] gi|258539381|ref|YP_003173880.1| peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705] gi|199591610|gb|EDY99687.1| Protein chain release factor A [Lactobacillus rhamnosus HN001] gi|257148093|emb|CAR87066.1| Peptide chain release factor 1 [Lactobacillus rhamnosus GG] gi|257151057|emb|CAR90029.1| Peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705] gi|259649483|dbj|BAI41645.1| peptide chain release factor [Lactobacillus rhamnosus GG] Length = 359 Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 112/343 (32%), Positives = 185/343 (53%), Gaps = 11/343 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILL 73 D + R L DP + + L +E + + ++ K+ + L D + +L Sbjct: 9 DGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKESEEVL 68 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132 + +ED ++ +E ++LQ+ K ++E K +L + D + +E+ AGG E+ Sbjct: 69 RESKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAGGDEASL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LL MY +AE++ +K E ++ E G K ++I G N Y LK E G HR+ R Sbjct: 129 FAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P D+ ++++I D R D YR+SGAGGQHVN T SAVR+ Sbjct: 189 VPVTESAGRVHTSTATVGVMPEYDE-VDLKIDPKDIRTDVYRSSGAGGQHVNKTSSAVRM 247 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV Q ERSQ +N+A+A +LR+++Y+ + +E ++ K IG G Sbjct: 248 THIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQE--KYDQNRKNAIGTGDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R + +++G+LD+ + A + Sbjct: 306 ERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIV 347 >gi|170077656|ref|YP_001734294.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002] gi|238689045|sp|B1XJH8|RF1_SYNP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169885325|gb|ACA99038.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002] Length = 363 Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 96/243 (39%), Positives = 149/243 (61%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA LLRMY+R+AE + ++ + L + G K+ L I Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLLRMYSRYAEGQNWRVKLLSESAADMGGFKAVILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ ++ R HTS ++I V P VDD +E+EI D + T Sbjct: 172 QGEQVYSKLKYEAGVHRVQRVPVTEAGGRVHTSTATIAVMPEVDD-VEVEIDPKDIEMTT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C +ERSQ +N+ +A +LRAKLYE+ELQ++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMELQRQ 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E + K+++G G +IR+Y + + V D R + S + L+GD++D ++A Sbjct: 291 QE--EVSSMRKSQVGTGARSEKIRTYNYKDNR-VTDHRLG-QNFSLAPALEGDIEDMLQA 346 Query: 350 TLA 352 ++ Sbjct: 347 CIS 349 >gi|162138527|ref|YP_483698.2| peptide chain release factor 1 [Rhodopseudomonas palustris HaA2] gi|119361590|sp|Q2J423|RF1_RHOP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 361 Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 108/292 (36%), Positives = 164/292 (56%), Gaps = 25/292 (8%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS---------DNLQRIKLEVEYK 102 L A+ +E++D L D LLE + + + E D +Q+I++ Sbjct: 45 LVEAVKAYREVRDELGDIDDLLEDPATDPEMRAMAEAERDALDAHREDLIQQIRV----- 99 Query: 103 QFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 +LL +A D + LE+ AG GG E+ +A L RMY ++A + + E + +G Sbjct: 100 ---ALLPKDAMDERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGT 156 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K +KG A+ LK E GVHR+ R+ ++ R HTS +++ V P V++ +++ Sbjct: 157 VGGFKEIIAEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEE-VDV 215 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 +I D +IDT RA GAGGQHVN T+SA+RITH+PTG+VV Q RSQHKN+A A N+LR Sbjct: 216 DIKPDDLKIDTMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILR 275 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +++Y+ E Q+R + A E K ++G G +IR+Y P V D R N+ Sbjct: 276 SRIYDAE-QQRIDSARSAE-RKQKVGSGDRSERIRTYNF-PQGRVTDHRINL 324 >gi|300214391|gb|ADJ78807.1| Peptide chain release factor 1 (RF-1) [Lactobacillus salivarius CECT 5713] Length = 360 Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 173/296 (58%), Gaps = 12/296 (4%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSND 116 KE+ ++ D+ +L L+++ S+++E N+ +++KLE E K LL + D + Sbjct: 55 KEVTQQISDDEEMLSDGLDDEMASLVKEELSNVKDEKVKLEEEIKIL--LLPKDPNDDKN 112 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGG E+ +A L MY+++AE++ + E ++ + E G K L+I G + Sbjct: 113 IIMEIRGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNS 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + LK E G HR+ RI +S R HTS +++ V P +D +EIE+ D R+D YR+S Sbjct: 173 VWSKLKYESGAHRVQRIPVTESAGRVHTSTATVVVMPEEED-VEIELDPKDIRVDVYRSS 231 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L+A++Y+ Q +E + Sbjct: 232 GAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQ--QEQS 289 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + K+ +G G +IR+Y P V D R + +++G+L+D + A Sbjct: 290 EYDANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDA 344 >gi|302759755|ref|XP_002963300.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii] gi|300168568|gb|EFJ35171.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii] Length = 509 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 110/271 (40%), Positives = 155/271 (57%), Gaps = 26/271 (9%) Query: 88 TSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 S LQ EV Q + LL EADS GAGG E+ +A+ L +MY + Sbjct: 32 ASGELQTATREVRDAQHDVLLELIPKDEADSR--------GAGGDEASIFASDLFKMYDK 83 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 +A ++ E L I + G K A+ I G YG LK E GVHR+ R+ + R H Sbjct: 84 YAANNSWRFEVLSITTTDTRGYKEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIH 143 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +S+ + P ++ I++EI + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV Sbjct: 144 TSTASVAILPEANE-IDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHTPTGIVVAI 202 Query: 264 QQERSQHKNKAQAWNMLRAKLYELE----LQKREEIA--NIGESSKTEIGWGRQIRSYVL 317 Q ERSQHKNKA+A ++L A+LYELE + R E+ IG S ++E +IR+Y Sbjct: 203 QDERSQHKNKAKALSILYARLYELERSRAVASRSELRQDQIGSSDRSE-----RIRTYNF 257 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG-DLDDFM 347 P V D R + + + +++G D+D+++ Sbjct: 258 -PQGRVTDHRVGVTQHAIEQIMEGIDVDNWI 287 >gi|317013501|gb|ADU80937.1| peptide chain release factor 1 [Helicobacter pylori Gambia94/24] Length = 352 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 114/299 (38%), Positives = 175/299 (58%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ +LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K +LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ ++ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVTLNPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|15644707|ref|NP_206877.1| peptide chain release factor 1 [Helicobacter pylori 26695] gi|2500136|sp|P55998|RF1_HELPY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|2313158|gb|AAD07148.1| peptide chain release factor RF-1 (prfA) [Helicobacter pylori 26695] Length = 352 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|256848019|ref|ZP_05553463.1| peptide chain release factor 1 [Lactobacillus coleohominis 101-4-CHN] gi|256715079|gb|EEU30056.1| peptide chain release factor 1 [Lactobacillus coleohominis 101-4-CHN] Length = 362 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 94/242 (38%), Positives = 141/242 (58%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L MY +AEK+ + E ++ + E G K L+I Sbjct: 111 DDKNIIMEIRGAAGGDEASLFAGDLYNMYLHYAEKQGWNVEIVDKTETEVGGFKEIVLMI 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P +D ++I++ D R+D Sbjct: 171 SGDKVYSKLKFENGAHRVQRIPVTESAGRVHTSTATVGVMPEAED-VQIDLDPKDIRVDV 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ QK Sbjct: 230 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKARVYDYYQQK- 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + K IG G +IR+Y P V D R + ++DGDLD+ ++A Sbjct: 289 -EQSAYDQKRKDAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMDGDLDEIIEA 346 Query: 350 TL 351 + Sbjct: 347 LI 348 >gi|317008750|gb|ADU79330.1| peptide chain release factor 1 [Helicobacter pylori India7] Length = 352 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|302785810|ref|XP_002974676.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii] gi|300157571|gb|EFJ24196.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii] Length = 412 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 118/350 (33%), Positives = 188/350 (53%), Gaps = 36/350 (10%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD--RLCDNLI--- 71 D+A Q L K DP + + E + L + ++ ++ ++ ++ R D+L Sbjct: 60 DSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEMI 119 Query: 72 -------LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L E+A+EE +IL+E NL+ EY + L S DS + LEV AG Sbjct: 120 KSSGDKELAEMAVEES--AILKENITNLE------EYLKVLLLPSDPLDSRNIMLEVRAG 171 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG E+ WA L+RMY ++AE+ ++ + + E+ G K L I G Y LK E Sbjct: 172 TGGDEAGIWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYE 231 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS +++ + P VD+ +E+ I D + T R+ GAGGQ+VN Sbjct: 232 SGVHRVQRVPATESQGRVHTSTATVAIMPEVDE-VEVVIDPKDIELTTARSGGAGGQNVN 290 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 ++AV + H PTG+ + C +ER+Q KNKA+A+ +LRAKLYE++L +++E I ++ Sbjct: 291 KVETAVDLFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQE--KISSQRRS 348 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++G G +IR+Y + + V D RT I + DLD F+ + Sbjct: 349 QVGTGARSEKIRTYNYKDNR-VSDHRTKI---------NFDLDSFLSGNI 388 >gi|94264416|ref|ZP_01288206.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1] gi|93455173|gb|EAT05391.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1] Length = 354 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 118/337 (35%), Positives = 185/337 (54%), Gaps = 19/337 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQH---LDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L + DP + + + L +E H L+ + ++ D L N LL+ EEDD Sbjct: 15 LEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEANGQLLQ---EEDDP 71 Query: 83 SIL----QETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 IL QE + QR+ +L+ E + + D + LE+ AG GG E+ + L Sbjct: 72 EILELARQEGEELRQRLAQLDKELR-LALVPPDPNDEKNILLEIRAGTGGDEASLFVANL 130 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+R+AE+ +K E L E G K LI G + + LK E GVHR+ R+ + Sbjct: 131 FRMYSRYAEQLGWKVEVLSSSATEVGGYKEIIALISGDHVFSRLKYESGVHRVQRVPETE 190 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + R HTS ++ V P ++ +E+ I+ ++ + D +R+SG GGQ VNTTDSAVR+TH+PT Sbjct: 191 TQGRVHTSAVTVAVLPEAEE-VELTINPAELKYDVFRSSGPGGQSVNTTDSAVRVTHLPT 249 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+VV CQ E+SQHKNKA+A +LRA+L L+ ++++ + K+++G G +IR+ Sbjct: 250 GLVVICQDEKSQHKNKAKALQVLRARL--LDQMQQQQHDQMSSDRKSQVGSGDRSERIRT 307 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y P + D R N+ DV+ G LD+ ++ + Sbjct: 308 YNF-PQNRLTDHRINLTSYRLEDVMLGRLDEVIEPLM 343 >gi|293399752|ref|ZP_06643898.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306152|gb|EFE47395.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 358 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 93/240 (38%), Positives = 142/240 (59%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS++A +E+ AGG E +A L RMY+++AE + +K E +E+ D E G + ++ Sbjct: 108 DSHNAIVEIRGAAGGDEGNIFAGDLYRMYSKYAESQGWKIEIVEMDDSEAGGFSLVSFMV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG YG LK E G HR+ R+ +S R HTS +++ V P ++ + + +I +D I+T Sbjct: 168 KGDGVYGKLKFESGSHRVQRVPKTESQGRIHTSTATVLVTPEIE-AEDFDIDMNDLEIET 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SGAGGQH+N TDSAVRI H PTG+ V+CQ RSQH+N+A A +R+++YE +K Sbjct: 227 MRSSGAGGQHINKTDSAVRIVHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKL 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE G +++IG G +IR+Y P V D R +++G + D + A Sbjct: 287 EE--EQGMERRSKIGTGDRAEKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGKMQDLLDA 343 >gi|271963194|ref|YP_003337390.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021] gi|270506369|gb|ACZ84647.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021] Length = 350 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 120/343 (34%), Positives = 180/343 (52%), Gaps = 10/343 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + D + + L K DP + + +A+ R L I+ +E++ D Sbjct: 1 MNLDELLSEYAELELKLADPTVHAHPAQARTFGRRYAELTPIITTYRELEGVQNDLDTAR 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132 ELA E++ E + L+ E+E K L+ + D D +E+ AG GG ES Sbjct: 61 ELASEDE---AFAEEAKELEGRVPELEDKLRHLLIPRDPNDDKDIIMEIKAGEGGEESAL 117 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG-W--LKGEQGVHR 189 +A LLRMY R+AE+ +KTE ++ + G K T+ +K G W LK E GVHR Sbjct: 118 FAGDLLRMYLRYAERVGWKTELIDATHSDLGGYKDVTVALKARGDEGVWSRLKFEGGVHR 177 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS + + VYP ++ +++++ +D RID YR+SG GGQ VNTTDSA Sbjct: 178 VQRVPVTESQGRIHTSAAGVLVYPEAEE-VDVQVDPNDLRIDVYRSSGPGGQSVNTTDSA 236 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308 VRITHIPTGVV CQ E+SQ +NK A +LRA+L + ++ A S+ + Sbjct: 237 VRITHIPTGVVASCQNEKSQLQNKESAMRILRARLQAIAEEEANAAAMAERKSQIRTVDR 296 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D R + + VLDGDL +++ L Sbjct: 297 SERIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLTAVIQSLL 338 >gi|307636767|gb|ADN79217.1| peptide chain release factor 1 [Helicobacter pylori 908] gi|325995353|gb|ADZ50758.1| Peptide chain release factor 1 [Helicobacter pylori 2018] gi|325996950|gb|ADZ49158.1| Peptide chain release factor 1 [Helicobacter pylori 2017] Length = 352 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 114/299 (38%), Positives = 175/299 (58%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ +LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K +LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ ++ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVTLNPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|312112637|ref|YP_003990953.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1] gi|311217738|gb|ADP76342.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1] Length = 358 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 125/347 (36%), Positives = 192/347 (55%), Gaps = 12/347 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +F+ AV+ R LN DP + + + + +E+ L+ + +E ++ +L D Sbjct: 1 MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVRKQLDD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 +LE L+ + +++E D L++ + E+ K LL + D + +E+ A AGG Sbjct: 61 AKAMLEEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +KTE +E G K I G AY LK E G Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P +++ IE+EI+E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEMEE-IEVEINEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQ--EARAEYDQTRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + VLDG LD+ ++A + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALI 343 >gi|239828604|ref|YP_002951228.1| peptide chain release factor 1 [Geobacillus sp. WCH70] gi|259585224|sp|C5D9N4|RF1_GEOSW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|239808897|gb|ACS25962.1| peptide chain release factor 1 [Geobacillus sp. WCH70] Length = 358 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 124/347 (35%), Positives = 192/347 (55%), Gaps = 12/347 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +F+ AV+ R LN DP + + + + +E+ L + +E ++ +L + Sbjct: 1 MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLSETVQTYREYKSVRKQLDE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 +LE L+ + +++E D L++ + E+ K LL + D + +E+ A AGG Sbjct: 61 AKAMLEEKLDPEMREMVKEEIDELEQKEEELVNKLKILLLPKDPNDEKNVIMEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +KTE +E G K I G AY LK E G Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTIIGKGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P +++ IE+EI+E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEMEE-IEVEINEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQ--EARAEYDQTRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + VLDG+LD+ ++A + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGNLDEIIEALI 343 >gi|118469567|ref|YP_889202.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2 155] gi|118170854|gb|ABK71750.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2 155] Length = 359 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 124/326 (38%), Positives = 180/326 (55%), Gaps = 13/326 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP L + A+ + R + ++ ++++ D ELA DD S Sbjct: 20 LERQLADPALHADAGAARKVGRRFAQVSPIVACYRKLEAARGDLEAARELAA--DDASFA 77 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E + ++ E++ Q LL+ D++D LEV +G GG ES +A L RMY R Sbjct: 78 DEVEELTAKVA-ELD-NQLTDLLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYIR 135 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIK--GPNAYG-W--LKGEQGVHRLVRISPYDS 198 +AE+ + L+ + G K ATL I+ G +A G W LK E GVHR+ R+ +S Sbjct: 136 YAERHGWTVTLLDETTSDLGGYKDATLSIRSRGDSADGVWARLKFEGGVHRVQRVPVTES 195 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS + + VYP ++ E++I ESD RID YR+SG GGQ VNTTDSAVRITH+PTG Sbjct: 196 QGRVHTSAAGVLVYPEPEEVEEVQIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTG 255 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVL 317 +VV CQ ERSQ +NKA+A +L A+L L ++ E A+ +S+ + +IR+Y Sbjct: 256 IVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEADASADRASQIRTVDRSERIRTYNF 315 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDL 343 P + D R N + + VLDGD+ Sbjct: 316 -PENRIADHRINFKAHNLDQVLDGDM 340 >gi|225874213|ref|YP_002755672.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC 51196] gi|254790854|sp|C1F2J1|RF1_ACIC5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225791643|gb|ACO31733.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC 51196] Length = 358 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 90/243 (37%), Positives = 147/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +A + RMY R+AE+R++K E L + + G K +I Sbjct: 105 DEKNVVVEIRAGTGGDEASLFAAEVFRMYARYAEQRRWKVEVLSMSESSVGGAKEVIAII 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + Y +K E GVHR+ R+ ++ R HTS ++ V P ++ ++++I D RIDT Sbjct: 165 EGDHVYSQMKYESGVHRVQRVPATETQGRVHTSAITVAVLPEAEE-VDVKIEAKDLRIDT 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVRITH+PT VV CQ E+SQ KN+ +A +LR++LYE+E++++ Sbjct: 224 FCSSGPGGQSVNTTYSAVRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERQ 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + + K ++G G +IR+Y P + D R + ++V++G L + A Sbjct: 284 QQA--LAKERKQQVGSGDRSEKIRTYNF-PQNRLTDHRIGLTIHQLAEVMEGRLQPVIDA 340 Query: 350 TLA 352 A Sbjct: 341 LTA 343 >gi|118475342|ref|YP_892837.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus 82-40] gi|166223541|sp|A0RRK4|RF1_CAMFF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118414568|gb|ABK82988.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus 82-40] Length = 355 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 117/321 (36%), Positives = 176/321 (54%), Gaps = 20/321 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76 + R + LN+ DP + ++ L +E+++L+ +A I + + +N LLE Sbjct: 10 IDRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIEENKTLLE-- 67 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA---YLEVHAGAGGTESQD 132 D + + D L+ ++ E+ + E L D ND +LE+ AG GG E+ Sbjct: 68 ----DPELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGTGGDEAAL 123 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + L Y R+ E+R +K E + +G G K LLIKG AY LK E G HR+ R Sbjct: 124 FVGDLATAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEGGTHRVQR 183 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P V+DS EI+I+ +D +ID R+SG GGQ VNTTDSAVR+ Sbjct: 184 VPETESQGRVHTSAITVAIMPEVEDS-EIDINPNDLKIDVMRSSGHGGQSVNTTDSAVRV 242 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310 THIPTG+VV Q +SQHKNK A +L+A+LY ++Q+RE + K ++G G Sbjct: 243 THIPTGLVVVNQDGKSQHKNKDAAIKVLKARLY--DMQERERREKESKERKDQVGTGDRS 300 Query: 311 -QIRSYVLQPYQMVKDLRTNI 330 +IR+Y P + D R N+ Sbjct: 301 GRIRTYNY-PQNRISDHRINL 320 >gi|94971498|ref|YP_593546.1| peptide chain release factor 1 [Candidatus Koribacter versatilis Ellin345] gi|119361503|sp|Q1II28|RF1_ACIBL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|94553548|gb|ABF43472.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Koribacter versatilis Ellin345] Length = 359 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +A L RMY R+AE +++K E L + G+K +I Sbjct: 106 DDKNIIVEIRAGTGGDEASLFAAELFRMYNRYAETQRWKVEVLSSSESGVGGLKEVIAII 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ ++ R HTS ++ V P ++ ++I+I D RIDT Sbjct: 166 EGRGAYSKLKYESGVHRVQRVPQTETQGRVHTSAVTVAVLPEAEE-VDIKIEAKDIRIDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVRITH+PT VV CQ E+SQ KN+ + +LRA+LYE+E QK+ Sbjct: 225 FCSSGPGGQSVNTTYSAVRITHLPTNTVVSCQDEKSQIKNREKGMRVLRARLYEVEQQKQ 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + + K ++G G +IR+Y P V D R S+ +DG ++ ++A Sbjct: 285 ADA--LAKERKQQVGSGDRSEKIRTYNF-PQNRVTDHRIGYTVHQLSEFMDGKINALIEA 341 >gi|189345639|ref|YP_001942168.1| peptide chain release factor 1 [Chlorobium limicola DSM 245] gi|238692166|sp|B3EE55|RF1_CHLL2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189339786|gb|ACD89189.1| peptide chain release factor 1 [Chlorobium limicola DSM 245] Length = 357 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 99/270 (36%), Positives = 162/270 (60%), Gaps = 7/270 (2%) Query: 84 ILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 ++Q ++LQ E+E +Q + LL EADS + +E+ AG GG E+ +A LLRMY Sbjct: 76 LVQMEIEDLQEKLPELE-QQLKVLLLPKDEADSRNVIMEIRAGTGGDEAALFAADLLRMY 134 Query: 142 TRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 R+AE++ +K L+ + G + TL + G + + +K E GVHR+ R+ ++ Sbjct: 135 QRYAERQGWKCVLLDYTESSVPGGFREVTLEVSGHDVFATMKYESGVHRVQRVPDTETQG 194 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +S+ V P ++ +++EI D R DTYR+ G GGQ+VN ++AVRITH+PTG+V Sbjct: 195 RIHTSAASVAVLPEAEE-VDVEIRRDDLRFDTYRSGGKGGQNVNKVETAVRITHLPTGIV 253 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQP 319 CQ+ERSQ +NK +A MLR KLY+++L +++++ A++ S + +IR+Y P Sbjct: 254 AACQEERSQLQNKERAMTMLRTKLYDIQLAEQQQQRADLRRSMVSTGDRSAKIRTYNY-P 312 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 V D R + ++ G++ D ++A Sbjct: 313 QSRVTDHRIGFTSHALPQIMQGEIGDVIEA 342 >gi|317011921|gb|ADU82529.1| peptide chain release factor 1 [Helicobacter pylori Lithuania75] Length = 352 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ +LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345 >gi|302521935|ref|ZP_07274277.1| peptide chain release factor 1 [Streptomyces sp. SPB78] gi|318060718|ref|ZP_07979441.1| peptide chain release factor 1 [Streptomyces sp. SA3_actG] gi|318075509|ref|ZP_07982841.1| peptide chain release factor 1 [Streptomyces sp. SA3_actF] gi|333024405|ref|ZP_08452469.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071] gi|302430830|gb|EFL02646.1| peptide chain release factor 1 [Streptomyces sp. SPB78] gi|332744257|gb|EGJ74698.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071] Length = 357 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 102/250 (40%), Positives = 145/250 (58%), Gaps = 12/250 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE L+ + E G K + Sbjct: 99 SDEKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEILDATESELGGYKDVQVA 158 Query: 172 IK---------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 +K G + +K E GVHR+ R+ +S R HTS + + V P ++ +++E Sbjct: 159 VKTKGNANPEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDVE 217 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR+ Sbjct: 218 INPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRS 277 Query: 283 KLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +L ++ E A S+ + +IR+Y P + D R + + VLDG Sbjct: 278 RLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGYKAYNLDQVLDG 336 Query: 342 DLDDFMKATL 351 DLD ++A + Sbjct: 337 DLDAVIQACV 346 >gi|328950071|ref|YP_004367406.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM 14884] gi|328450395|gb|AEB11296.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM 14884] Length = 369 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/240 (38%), Positives = 140/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +E+ AG GG E+ +A L MY R+AE+ + E L+ H + G + Sbjct: 113 DAKNAIVEIRAGTGGEEAALFAGDLYNMYVRYAERLGYTVEVLDSHPTDLGGFSKVVFQV 172 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG K E GVHR+ R+ ++ R HTS +++ V P +++ + E+ S+ RID Sbjct: 173 NGSGAYGVFKYESGVHRVQRVPATETQGRIHTSTATVAVLPEAEEA-DFELDMSEIRIDV 231 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQ VNTTDSAVR+ H+PTG++V CQ RSQ KN+ +A +LR++L LE+++ Sbjct: 232 QRASGPGGQGVNTTDSAVRVVHLPTGIIVTCQDSRSQIKNREKALTILRSRL--LEMKRA 289 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE A + + +IG G +IR+Y P V D R + + VL G+L++ A Sbjct: 290 EEEAKLRRTRLAQIGTGERSEKIRTYNF-PQSRVTDHRIHYTTHNLEGVLAGELEELTNA 348 >gi|109948016|ref|YP_665244.1| peptide chain release factor 1 [Helicobacter acinonychis str. Sheeba] gi|122973223|sp|Q17VT1|RF1_HELAH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|109715237|emb|CAK00245.1| peptide chain release factor RF-1 [Helicobacter acinonychis str. Sheeba] Length = 352 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 174/299 (58%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +++ +LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IKKSELETTIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +EI I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEISINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|308271577|emb|CBX28185.1| Peptide chain release factor 1 [uncultured Desulfobacterium sp.] Length = 363 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 105/278 (37%), Positives = 156/278 (56%), Gaps = 11/278 (3%) Query: 77 LEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132 L+ +D I + D ++ + L+ E KQ LL E D + LE+ AG GG E+ Sbjct: 69 LKNEDPEIKELARDEIEELNLKKEDLEKQLRLLLIPKDEKDEKNVILEIRAGTGGDEAAL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE R +K E L G+K LI+G AY K E G HR+ R Sbjct: 129 FATDLFRMYSRYAENRNWKVEVLTHSPTGVGGLKEIVALIQGKGAYSSFKYESGTHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P ++ +E++I + ++D YR++G GGQ VNTTDSAVRI Sbjct: 189 VPVTEAQGRIHTSAVTVAVLPEAEE-VELDIDPGEIKVDVYRSTGPGGQSVNTTDSAVRI 247 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV CQ E+SQ KNK++A +LRA+L L+ E+ K +IG G Sbjct: 248 THLPTGLVVTCQDEKSQFKNKSKAMKVLRARL--LDNITMEQNQKRSAERKHQIGSGDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P V D R + +L+G++D+ + Sbjct: 306 ERIRTYNF-PQSRVTDHRIGLTLYKLEYILEGNIDEII 342 >gi|210134282|ref|YP_002300721.1| peptide chain release factor 1 [Helicobacter pylori P12] gi|238058714|sp|B6JPI0|RF1_HELP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|210132250|gb|ACJ07241.1| peptide chain release factor RF-1 [Helicobacter pylori P12] Length = 352 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ +LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSELETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345 >gi|254780874|ref|YP_003065287.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus str. psy62] gi|254040551|gb|ACT57347.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus str. psy62] Length = 357 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 145/243 (59%), Gaps = 10/243 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D LE+ AG GG+E+ + L RMY R+A RK+K E L D ++ G K I Sbjct: 108 DDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + +K E GVHR+ R+ +++ R HTS +++ V P + I+++I D RIDT Sbjct: 168 SGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG+GGQHVNTTDSAVRITHIPTG++V E+SQH+N+ +A +LRA+LY++E R Sbjct: 227 MRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVE---R 282 Query: 293 EEIANIGESS-KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + +AN ++ K +IG G +IR+Y + + D R N+ VL G +DD + Sbjct: 283 KRMANERSANRKLQIGSGDRSERIRTYNFSQGR-ITDHRINLTLYKLEYVLQGYIDDIIN 341 Query: 349 ATL 351 L Sbjct: 342 PLL 344 >gi|78185965|ref|YP_374008.1| peptide chain release factor 1 [Chlorobium luteolum DSM 273] gi|119361573|sp|Q3B6R6|RF1_PELLD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78165867|gb|ABB22965.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium luteolum DSM 273] Length = 358 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 95/245 (38%), Positives = 146/245 (59%), Gaps = 4/245 (1%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGI 165 L EADS + +E+ AG GG E+ +A L+RMY R+AE++ ++ E L+ ++ G Sbjct: 100 LPKDEADSRNVIMEIRAGTGGEEAALFAADLMRMYQRYAERQGWRCEVLDYNESSGPGGF 159 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 + TL I G + YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ +++EI Sbjct: 160 REVTLTISGHDVYGTLKYESGVHRVQRVPETETQGRIHTSAASVAVLPEAEE-VDVEIRR 218 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R DTYR+ G GGQ+VN ++AVRITH PTG+V CQ+ERSQ +NK +A ML AKLY Sbjct: 219 DDLRFDTYRSGGKGGQNVNKVETAVRITHEPTGLVAACQEERSQLQNKERAMKMLMAKLY 278 Query: 286 ELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +++LQ +++E A++ + +IR+Y P V D R + G++ Sbjct: 279 DIKLQEQQQERADMRRTMVASGDRSAKIRTYNY-PQSRVTDHRIGFTSHGLPHFMQGEIG 337 Query: 345 DFMKA 349 + + A Sbjct: 338 ELIDA 342 >gi|221195206|ref|ZP_03568262.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626] gi|221185109|gb|EEE17500.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626] Length = 355 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 123/333 (36%), Positives = 175/333 (52%), Gaps = 30/333 (9%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K DP + + E + +E H D A + E+ D L +E A E +L Sbjct: 15 LEKKLADPAVVSDPKEYARIAKE--HADQA--ELVELSRSYIDALDDIEAAKE-----LL 65 Query: 86 QETSDNLQRIKLEVEYKQFES------------LLSGEA-DSNDAYLEVHAGAGGTESQD 132 +SD ++ L+ + + E+ L+ G+ D D +E+ AG GG E+ Sbjct: 66 SGSSDAEEKEMLQADISENEAKLPELEDEIKIKLIPGDPNDEKDTIVEIRAGVGGDEAAI 125 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L +MY R+AE R +K + L E G K+ + G Y +K E GVHR+ R Sbjct: 126 FAGDLFKMYERFAESRGWKVQVLSSSPSEAGGFKTIEFKVTGEKVYSVMKFESGVHRVQR 185 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R TS +++ V P DD I+I+I++ D RIDTY ASG GGQ VNTT SAVRI Sbjct: 186 VPKTESQGRIQTSTATVAVLPEADD-IDIQINQEDLRIDTYCASGPGGQGVNTTYSAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PT VVQ Q +RSQ +N+ MLRA+LYE EL++++ A G ++IG G Sbjct: 245 THLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEQELERQQ--AEQGADRLSQIGHGARS 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y QP V D R T + VL GD Sbjct: 303 EKIRTYN-QPQDRVTDHRIGFNGTY-NGVLLGD 333 >gi|108562503|ref|YP_626819.1| peptide chain release factor 1 [Helicobacter pylori HPAG1] gi|119361549|sp|Q1CV77|RF1_HELPH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|107836276|gb|ABF84145.1| peptide chain release factor RF-1 [Helicobacter pylori HPAG1] Length = 352 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 114/299 (38%), Positives = 173/299 (57%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K++ E + + G K LIKG Sbjct: 111 YLELRAGTGGNEAGIFVGDLFKAYCRYADLKKWRVEIVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|289428601|ref|ZP_06430285.1| peptide chain release factor 1 [Propionibacterium acnes J165] gi|289158295|gb|EFD06514.1| peptide chain release factor 1 [Propionibacterium acnes J165] gi|313807753|gb|EFS46240.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA2] gi|313825434|gb|EFS63148.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA1] gi|314978719|gb|EFT22813.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA2] gi|315088524|gb|EFT60500.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA1] gi|327331707|gb|EGE73444.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA3] gi|327443483|gb|EGE90137.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA2] gi|332675656|gb|AEE72472.1| peptide chain release factor 1 [Propionibacterium acnes 266] Length = 361 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 119/347 (34%), Positives = 185/347 (53%), Gaps = 28/347 (8%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D +RL + T+ D + + L + L + +S + D+L ++ E Sbjct: 10 DEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRV-DQLRADVEAAEDL 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 EED L+ ++ L R +L++ + LL S D DA +E+H+G GG ES +A Sbjct: 69 TEEDPAFGLE--AERL-RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PN--AYGWLKGEQGVHRLV 191 LLRMYTR+AE+ + L + G ++ + + G P+ AYG+LK E GVHR+ Sbjct: 126 ADLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR Sbjct: 186 RVPVTESSGRIHTSAVGVLVMPDVDET-EVDIDPAEVRVDVYRSSGPGGQGVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESS 302 +TH+ TG+V CQ ERSQ +NKA+A MLRAK+ E + +R+++ + S+ Sbjct: 245 LTHLRTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSA 304 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +R+Y P + D R + +L GDL D + A Sbjct: 305 R--------VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342 >gi|113476549|ref|YP_722610.1| peptide chain release factor 1 [Trichodesmium erythraeum IMS101] gi|119361636|sp|Q110D7|RF1_TRIEI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110167597|gb|ABG52137.1| bacterial peptide chain release factor 1 (bRF-1) [Trichodesmium erythraeum IMS101] Length = 369 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 115/343 (33%), Positives = 188/343 (54%), Gaps = 31/343 (9%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD----------NLIL 72 L + DP + ++ E + L + R L+ ++ K Q+ L D +L + Sbjct: 20 LTLRLADPDVAKDPSEFQKLAKARSSLEEVVNCYVEWKNAQEELADAKEILKEAVGDLEM 79 Query: 73 LELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+A +E +D E+ +N +I L L D + LE+ AG GG E+ Sbjct: 80 QEMAKVEVEDLEAKLESLENQMKIAL---------LPRDPNDDKNIMLEIRAGTGGDEAS 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 WA L+RMY+R++E + +K L + G K A L IKG + Y LK E GVHR+ Sbjct: 131 IWAGDLVRMYSRYSENQSWKVSLLSESLADMGGFKEAILEIKGDHVYSKLKFEAGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ + P VDD +E+EI + D + T R+ GAGGQ+VN ++AV Sbjct: 191 RVPVTEAGGRVHTSTATVAIMPEVDD-VEVEIDQKDIELSTARSGGAGGQNVNKVETAVD 249 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 + H PTG+ + C QERSQ +N+ +A +LRAKLYE++LQ E+ A + ++++G G Sbjct: 250 LFHKPTGIRIFCTQERSQLQNRERAMQILRAKLYEIKLQ--EQQAEVSSIRRSQVGTGSR 307 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y + + V D R N + S +L+GD+++ ++A + Sbjct: 308 SEKIRTYNYKDNR-VTDHRLN-QNFSLVPLLEGDIENVIQACI 348 >gi|325679581|ref|ZP_08159156.1| peptide chain release factor 1 [Ruminococcus albus 8] gi|324108611|gb|EGC02852.1| peptide chain release factor 1 [Ruminococcus albus 8] Length = 359 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 90/241 (37%), Positives = 147/241 (60%), Gaps = 8/241 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GAGG E+ +AN L RMYT +A ++ ++ + + ++ E G K T + Sbjct: 107 DDRNVIIEIRGGAGGEEAALFANSLYRMYTMYAAQKGWQIDVMSANETELGGYKEITFTV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES-DCRID 231 G AY LK E GVHR+ R+ +S R HTS ++ V P ++ +E++++E D +++ Sbjct: 167 SGQGAYSRLKYESGVHRVQRVPETESQGRVHTSTVTVAVLPEAEE-VELDLNEERDIKME 225 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +R+SGAGGQH+N T SAVR+ HIPTG VV+CQ ERSQ +N+ +A MLRAKL + +++ Sbjct: 226 VFRSSGAGGQHINKTSSAVRLIHIPTGTVVECQNERSQFQNRDKALKMLRAKLLDEKVRA 285 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +E I + ++++G G +IR+Y P + D R + +L+G+LD+ + Sbjct: 286 QEN--EIASNRRSQVGTGDRSEKIRTYNF-PESRISDHRIKLTLYKLEQILNGNLDEVID 342 Query: 349 A 349 A Sbjct: 343 A 343 >gi|158334426|ref|YP_001515598.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017] gi|189039957|sp|B0C424|RF1_ACAM1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|158304667|gb|ABW26284.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017] Length = 363 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 89/206 (43%), Positives = 133/206 (64%), Gaps = 6/206 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGAGG E+ WA L+R+Y+++AE +K++ + L GE G K A L I Sbjct: 112 DEKNIMLEIRAGAGGDEASIWAGDLVRIYSKYAESQKWRVKLLSESGGEMGGFKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ +++ R HTS +++ V P VDD +EIEI D + T Sbjct: 172 QGERVYSKLKYEAGVHRVQRVPATEASGRVHTSTATVAVMPEVDD-VEIEIDPKDIEMST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +NK +A +LRAKLYE+ELQ Sbjct: 231 ARSGGAGGQNVNKVETAVDLVHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMELQ-- 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSY 315 E+ A++ ++++G G +IR+Y Sbjct: 289 EQQASVTSMRRSQVGTGARSEKIRTY 314 >gi|304407781|ref|ZP_07389432.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9] gi|304343264|gb|EFM09107.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9] Length = 358 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/244 (37%), Positives = 150/244 (61%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L RMY ++A+ + ++ E +++++ + G K +I Sbjct: 106 DDKNVIVEIRGAAGGDEAALFAYDLYRMYNKYADSQGWRVELMDMNESDLGGFKEVVFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ RI +S R HTS S++ V P +++ ++IEI + D RIDT Sbjct: 166 IGKGAYSKLKFESGAHRVQRIPATESGGRIHTSTSTVAVMPEIEE-VDIEIHDKDIRIDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+ H+PTG++ CQ +SQ++NKA+A +LRA++Y E+ ++ Sbjct: 225 FCSSGAGGQSVNTTKSAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARIY--EIHRQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE A K+++G G +IR+Y P V D R + +++GD+++ ++ Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNY-PQSRVTDHRIGLTLHRLDAIMNGDIEEIVQ- 340 Query: 350 TLAI 353 TL I Sbjct: 341 TLTI 344 >gi|315586075|gb|ADU40456.1| peptide chain release factor RF1 [Helicobacter pylori 35A] Length = 352 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 97/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +EI I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEISINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|224048051|ref|XP_002187712.1| PREDICTED: mitochondrial translational release factor 1-like [Taeniopygia guttata] Length = 421 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 99/224 (44%), Positives = 136/224 (60%), Gaps = 7/224 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S E D +D +EV AG GG E+ + + + MY R+A +K+K E LE E G++ Sbjct: 155 IPSEETDESDLVMEVTAGVGGQEAMLFTSEIFDMYQRYAAYKKWKFEVLEYFPSELGGLR 214 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A I G AY ++K E GVHR+ R+ + R HTS ++ + P + + ++I+ Sbjct: 215 HAVASIAGLEAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-MRLQINPK 273 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RI+T RASGAGGQHVNTTDSAVRI HIPTG+V +CQQERSQ +NK +A ML AKLY Sbjct: 274 DLRIETKRASGAGGQHVNTTDSAVRIVHIPTGIVSECQQERSQIRNKEKAMQMLCAKLYN 333 Query: 287 LELQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLR 327 +L+ EE + K +IG GR +IR+Y P + D R Sbjct: 334 AKLE--EETKKRNYARKIQIGTKGRSEKIRTYNF-PQDRITDHR 374 >gi|78187994|ref|YP_378332.1| peptide chain release factor 1 [Chlorobium chlorochromatii CaD3] gi|119361520|sp|Q3AUE2|RF1_CHLCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78170193|gb|ABB27289.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium chlorochromatii CaD3] Length = 357 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 103/281 (36%), Positives = 162/281 (57%), Gaps = 16/281 (5%) Query: 76 ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 AL E + LQET L Q +K+ + L EADS + +E+ AG GG E+ +A Sbjct: 75 ALAEAEVDELQETVAELEQGLKILL-------LPKEEADSRNVIIEIRAGTGGDEASLFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 L RMY R+AE++ ++ + L+ ++ G K L I G N +G +K E GVHR+ R+ Sbjct: 128 ADLTRMYQRYAEQKGWQYKVLDYNESSVPGGFKEMILEISGNNVFGTMKYESGVHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS S+ V P ++ +++EI D R DTYR+ G GGQ+VN ++AVRIT Sbjct: 188 PDTEAQGRIHTSAVSVAVLPEAEE-VDVEIRRDDLRFDTYRSGGKGGQNVNKVETAVRIT 246 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+V CQ+ERSQ +NK +A MLR KLY+++L ++++ + +T + G Sbjct: 247 HMPTGIVAACQEERSQLQNKERAMQMLRTKLYDIQLAEQQQ--QRADLRRTMVATGDRSA 304 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + ++ G+L + ++A + Sbjct: 305 KIRTYNY-PQSRVTDHRIGFTSHALPQIMQGELHEVIEALI 344 >gi|225436757|ref|XP_002269884.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296086617|emb|CBI32252.3| unnamed protein product [Vitis vinifera] Length = 411 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 111/345 (32%), Positives = 191/345 (55%), Gaps = 27/345 (7%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ K DP + N E + L + LD +S K +D C+ + AL ++D Sbjct: 63 LSVKLADPDIVSNPSEYQKLAQSMAELDEVVSTFKRFKD--CEKQLEEAKALAKEDGI-- 118 Query: 86 QETSDNLQRIKLEV-----EYKQFES------LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +D + I E+ + K+ E L S DS + LEV AG GG E+ WA Sbjct: 119 --DADMAEMIAYEIGTLTNQLKELEENIKVLLLPSDPLDSRNILLEVRAGTGGDEAGIWA 176 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L+RMY +++E+ +K + + E+ G K+ L +KG Y LK E GVHR+ R+ Sbjct: 177 GDLVRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVHRVQRVP 236 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ + P D+ +E+ I D + T R+ GAGGQ+VN ++AV + H Sbjct: 237 QTETQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFH 295 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+ + C +ER+Q +N+++A +LRAKLYE+++++++E+ I K+++G G + Sbjct: 296 KPTGIRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQEL--IRNQRKSQVGTGARAEK 353 Query: 312 IRSYVLQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y + ++ L+ N E TS LDGD++ +++ +A+++ Sbjct: 354 IRTYNYKDNRVTDHRLKMNFELTS---FLDGDIETAVQSCVAMEQ 395 >gi|311033344|ref|ZP_07711434.1| peptide chain release factor 1 [Bacillus sp. m3-13] Length = 356 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 117/347 (33%), Positives = 183/347 (52%), Gaps = 12/347 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD AV+ R L DP + + + + +E+ + + +E ++++L D Sbjct: 1 MFDRLQAVEMRYEKLTELLSDPEVISDTKKLREYSKEQSDIQETVEAYREYKAVKEQLDD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 +LE L+ D +++E L+ + + + LL + D + +E+ AGG Sbjct: 61 AKAMLEDKLDADMREMVKEEIAELEEQQENLADRLHILLLPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E G K +I G AY LK E G Sbjct: 121 DEAALFAGDLYRMYSRYAEAQGWKTEVMEAASTGVGGYKEIIFMITGKGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ +EIEI + D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIEIHDKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPT VV CQ E+SQ KNK +A +LRA++Y+ + Q RE A + K +G Sbjct: 240 SAVRLTHIPTNTVVSCQDEKSQIKNKEKAMKVLRARVYD-KFQ-REVQAEYDANRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + +L G L + + A + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLQEVIDALI 343 >gi|227890652|ref|ZP_04008457.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC 11741] gi|227867590|gb|EEJ75011.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC 11741] Length = 360 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 103/298 (34%), Positives = 173/298 (58%), Gaps = 12/298 (4%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSND 116 KE+ ++ D+ +L L+++ S+++E N +++KLE E K LL + D + Sbjct: 55 KEVTQQISDDEEMLSDGLDDEMASLVKEELSNAKDEKVKLEEEIKIL--LLPKDPNDDKN 112 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGG E+ +A L MY+++AE++ + E ++ + E G K L+I G + Sbjct: 113 IIMEIRGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNS 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + LK E G HR+ RI +S R HTS +++ V P +D +EIE+ D R+D YR+S Sbjct: 173 VWSKLKYESGAHRVQRIPVTESAGRVHTSTATVVVMPEEED-VEIELDPKDIRVDVYRSS 231 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L+A++Y+ Q +E + Sbjct: 232 GAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQ--QEQS 289 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K+ +G G +IR+Y P V D R + +++G+L+D + A + Sbjct: 290 EYDANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALI 346 >gi|229819782|ref|YP_002881308.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333] gi|229565695|gb|ACQ79546.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333] Length = 373 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 117/336 (34%), Positives = 173/336 (51%), Gaps = 27/336 (8%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED----DCSILQ- 86 DP + + A+ L R L + + + D ELA+E+D + LQ Sbjct: 33 DPAVHADAGRARALGRRYAELGRVVGAYRAWRRAADDATAAAELAVEDDAFASEVPALQV 92 Query: 87 ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + +++L+R+ + + D D LE+ AG GG ES +A LLRMY R Sbjct: 93 AEADAAEHLRRVLVPRDPD----------DGRDVILEIKAGEGGEESALFAGDLLRMYLR 142 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-------YGWLKGEQGVHRLVRISPY 196 +AE+R ++T+ LE + + G K + +K A + LK E GVHR+ R+ Sbjct: 143 FAERRGWQTQVLEATESDLGGYKDVQVAVKSRGAAAPEDGVWAALKYEGGVHRVQRVPVT 202 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS + + V P VDD E+EI D RID +R+SG GGQ VNTTDSAVRITH+P Sbjct: 203 ESQGRIHTSAAGVLVLPEVDDPGEVEIEGGDLRIDVFRSSGPGGQSVNTTDSAVRITHLP 262 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSY 315 TG+VV Q E+SQ +N+ QA +LRA+L + + A S+ + +IR+Y Sbjct: 263 TGIVVSMQNEKSQLQNREQAMRVLRARLLAAQQEAAAAEAAEARRSQVRTVDRSERIRTY 322 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P + D RT + + VL GDLD + + + Sbjct: 323 NF-PENRIADHRTGYKAYNLDAVLAGDLDAVVASAV 357 >gi|90961566|ref|YP_535482.1| peptide chain release factor 1 [Lactobacillus salivarius UCC118] gi|119361553|sp|Q1WUD6|RF1_LACS1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|90820760|gb|ABD99399.1| Bacterial Peptide Chain Release Factor 1 [Lactobacillus salivarius UCC118] Length = 360 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 172/296 (58%), Gaps = 12/296 (4%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSND 116 KE+ ++ D+ +L L+++ S+++E N +++KLE E K LL + D + Sbjct: 55 KEVTQQISDDEEMLSDGLDDEMASLVKEELSNAKNEKVKLEEEIKIL--LLPKDPNDDKN 112 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGG E+ +A L MY+++AE++ + E ++ + E G K L+I G + Sbjct: 113 IIMEIRGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNS 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + LK E G HR+ RI +S R HTS +++ V P +D +EIE+ D R+D YR+S Sbjct: 173 VWSKLKYESGAHRVQRIPVTESAGRVHTSTATVVVMPEEED-VEIELDPKDIRVDVYRSS 231 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L+A++Y+ Q +E + Sbjct: 232 GAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQ--QEQS 289 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + K+ +G G +IR+Y P V D R + +++G+L+D + A Sbjct: 290 EYDANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDA 344 >gi|308183875|ref|YP_003928008.1| peptide chain release factor 1 [Helicobacter pylori SJM180] gi|308059795|gb|ADO01691.1| peptide chain release factor 1 [Helicobacter pylori SJM180] Length = 352 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 112/304 (36%), Positives = 177/304 (58%), Gaps = 20/304 (6%) Query: 56 ISFIKEIQD--RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA- 112 +S +++I++ L ++ L ELA EE IL+ +Q+ LE KQ L+ + Sbjct: 55 LSVLEDIKENKELLEDKELSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPN 105 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ ++ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVTLNPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|217033144|ref|ZP_03438604.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128] gi|298736978|ref|YP_003729508.1| peptide chain release factor RF-1 [Helicobacter pylori B8] gi|216945129|gb|EEC23827.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128] gi|298356172|emb|CBI67044.1| peptide chain release factor RF-1 [Helicobacter pylori B8] Length = 352 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 172/299 (57%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345 >gi|159027581|emb|CAO86953.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 366 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 112/341 (32%), Positives = 185/341 (54%), Gaps = 15/341 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q + L + DP + N E L + R L+ ++ EI + ++LI + +E Sbjct: 15 QTYTELTRRLADPDVTSNPGELHRLAKSRASLEETVNTY-EIWQKSQEDLIGAKQIFKES 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLS------GEADSNDAYLEVHAGAGGTESQDWA 134 L+ +LE + E L+ D + LE+ AG GG E+ WA Sbjct: 74 ASDPELREMAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEIRAGTGGDEASIWA 133 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L+R+Y+++AE + +K L + G K A L IKG N Y LK E GVHR+ R+ Sbjct: 134 GDLVRLYSKYAETQNWKVSLLSESPADMGGFKEAILEIKGDNVYSKLKFEAGVHRVQRVP 193 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +++ R HTS +++ + P VDD +E+ I D + T R+ GAGGQ+VN ++AV + H Sbjct: 194 LTEASGRVHTSTATVAIMPEVDD-VEVHIDPKDIELTTARSGGAGGQNVNKVETAVDLIH 252 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+ V C +ERSQ +N+ +A +LRAKLY+++LQ+++E + ++++G G + Sbjct: 253 KPTGIRVFCTEERSQLQNRERAMQILRAKLYDIKLQEQQEA--VSSMRRSQVGTGSRSEK 310 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y + ++ D R N E S +LDGD++D +++ +A Sbjct: 311 IRTYNYKDNRLT-DHRLN-ENFSLDRILDGDIEDVIQSCIA 349 >gi|254446350|ref|ZP_05059826.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235] gi|198260658|gb|EDY84966.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235] Length = 408 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 94/241 (39%), Positives = 144/241 (59%), Gaps = 7/241 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E DS + +E+ AGAGG E+ +A L RMYTR AE++ ++ E + + G K Sbjct: 151 ETDSRNTIVEIRAGAGGDEASLFAADLYRMYTRLAERKGWRVEQMSASESGIDGFKEVIF 210 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G Y LK E GVHR+ R+ +S R HTS +++ V P ++ +++EI+ D + Sbjct: 211 SITGEEVYKKLKLESGVHRVQRVPETESQGRIHTSTATVAVLPEAEE-VDVEINPQDLEV 269 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 T RASGAGGQHVNTTDSA+ I H PTG+ V C ERSQ KN+A+A +L +++ L+++ Sbjct: 270 TTCRASGAGGQHVNTTDSAINIVHKPTGITVYCADERSQIKNRAKAMKVLYSRI--LQVK 327 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + EE + E+ K ++G G +IR+Y P + D R + S V+DGD+++ + Sbjct: 328 QEEERSKYAENRKKQVGTGDRSERIRTYNF-PQSRLTDHRIGLTLHSLPAVMDGDMEEIL 386 Query: 348 K 348 + Sbjct: 387 E 387 >gi|301299965|ref|ZP_07206192.1| peptide chain release factor 1 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852447|gb|EFK80104.1| peptide chain release factor 1 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 360 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 172/296 (58%), Gaps = 12/296 (4%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEA-DSND 116 KE+ ++ D+ +L L+++ S+++E N +++KLE E K LL + D + Sbjct: 55 KEVTQQISDDEEMLSDGLDDEMASLVKEELSNAKNEKVKLEEEIKIL--LLPKDPNDDKN 112 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGG E+ +A L MY+++AE++ + E ++ + E G K L+I G + Sbjct: 113 IIMEIRGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNS 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + LK E G HR+ RI +S R HTS +++ V P +D +EIE+ D R+D YR+S Sbjct: 173 VWSKLKYESGAHRVQRIPVTESAGRVHTSTATVVVMPEEED-VEIELDPKDIRVDVYRSS 231 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L+A++Y+ Q +E + Sbjct: 232 GAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQ--QEQS 289 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + K+ +G G +IR+Y P V D R + +++G+L+D + A Sbjct: 290 EYDANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDA 344 >gi|301613862|ref|XP_002936423.1| PREDICTED: peptide chain release factor 1-like, mitochondrial [Xenopus (Silurana) tropicalis] Length = 420 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 109/255 (42%), Positives = 151/255 (59%), Gaps = 11/255 (4%) Query: 102 KQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 K+ S+L GE++ ND +EV AG GG E+ + + MY +A + + + LE Sbjct: 145 KKIASILIKRGESEDNDLIMEVTAGVGGQEAMLFTAEMFDMYQHYAVHKNWSFDLLEYFS 204 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 E G++ AT+ I G +AY LK E GVHR+ R+ + R HTS ++ + P + I Sbjct: 205 SELGGLRHATVSIGGQDAYKCLKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPSE-I 263 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + I+ D RI+T RASGAGGQHVNTTDSAVRI HIPTGVV +CQQERSQ KNK +A + Sbjct: 264 NLVINPKDLRIETKRASGAGGQHVNTTDSAVRIVHIPTGVVSECQQERSQIKNKEKAMQV 323 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPS 336 LRAKLY ++L+ EE + + K +IG GR +IR+Y P V D R + Sbjct: 324 LRAKLYTMKLE--EETSKRYNARKIQIGTRGRSEKIRTYNY-PQDRVTDHRIGKSLHNIE 380 Query: 337 DVLDGD--LDDFMKA 349 L G+ LDD +++ Sbjct: 381 GFLFGEELLDDLIQS 395 >gi|167629003|ref|YP_001679502.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1] gi|238687991|sp|B0TI71|RF1_HELMI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167591743|gb|ABZ83491.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1] Length = 354 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 91/221 (41%), Positives = 141/221 (63%), Gaps = 7/221 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +A L RMY+R+A+++ ++TE L + + G K +LI Sbjct: 105 DDKNVIIEIRAGTGGEEAALFAGDLYRMYSRFADRQGWRTELLSANYTDIGGFKEVIVLI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G A+ LK E GVHR+ R+ +S+ R HTS +++ V P ++ +EIE++ ++ RID Sbjct: 165 EGQGAFSKLKFESGVHRVQRVPATESSGRIHTSAATVAVLPEAEE-VEIEVNPNELRIDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQHVN T+SAVRITH+PTG+VV CQ E+SQ KN+ +A +LRA+L LE + Sbjct: 224 FCSSGAGGQHVNKTESAVRITHLPTGIVVSCQDEKSQLKNREKAMRVLRARL--LEKARE 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 E+ + + K+ +G G +IR+Y P V D R + Sbjct: 282 EQHGEMASARKSMVGSGDRSERIRTYNF-PQGRVTDHRIGL 321 >gi|188526883|ref|YP_001909570.1| peptide chain release factor 1 [Helicobacter pylori Shi470] gi|238691882|sp|B2URQ8|RF1_HELPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|188143123|gb|ACD47540.1| peptide chain release factor 1 [Helicobacter pylori Shi470] Length = 352 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINSSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|329939826|ref|ZP_08289127.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus M045] gi|329301396|gb|EGG45291.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus M045] Length = 361 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/254 (40%), Positives = 146/254 (57%), Gaps = 16/254 (6%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158 Query: 172 IK-------------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ Sbjct: 159 VKTKPHGVSQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE- 217 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 +++EI+ SD RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA Sbjct: 218 VDVEINPSDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALR 277 Query: 279 MLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +LR++L ++ E+ A S+ + +IR+Y P + D R + + Sbjct: 278 ILRSRLLAAAQEEAEKEAADARRSQVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQ 336 Query: 338 VLDGDLDDFMKATL 351 VLDGDLD ++A + Sbjct: 337 VLDGDLDAVIQACV 350 >gi|317176897|dbj|BAJ54686.1| peptide chain release factor 1 [Helicobacter pylori F16] Length = 352 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|299537972|ref|ZP_07051258.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1] gi|298726554|gb|EFI67143.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1] Length = 358 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 110/347 (31%), Positives = 190/347 (54%), Gaps = 12/347 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD AV+ R L DP + + + + +E+ + + +E ++++L D Sbjct: 1 MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKSVKEQLVD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGG 127 +L+ + D +++E + L+ + E+E + L+ + + N + +E+ AGG Sbjct: 61 TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +K + +E G K +I G AY K E G Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P V++ +++EI E D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEVEE-VDVEIHEKDIRVDTFASSGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV Q ERSQ KN+ +A +LRA++ ++ +Q+ ++ I + K+ +G Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQEAQK--EIDATRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + +++G LD+ + A + Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDALI 343 >gi|304311492|ref|YP_003811090.1| peptide chain release factor 1 [gamma proteobacterium HdN1] gi|301797225|emb|CBL45445.1| peptide chain release factor 1 [gamma proteobacterium HdN1] Length = 362 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 111/319 (34%), Positives = 183/319 (57%), Gaps = 17/319 (5%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL-----QRIKL 97 + L +E L+ ++ + + L D + +L +E+ D + + ++ L QR + Sbjct: 36 RKLSQEYAELEPVVTCFADYRKVLADITLARQL-MEDSDPEMREMGAEELRTGQAQRDQF 94 Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 E++ ++ L D + YLE+ AG GG E+ +A L RMY+R+AE ++ E + Sbjct: 95 ELDLQKL-MLPKDPNDGRNVYLEIRAGTGGDEAAIFAGDLFRMYSRYAESCGWRVEVISE 153 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 H+GE G K + G + Y LK E G HR+ R+ ++ R HTS ++ V P D+ Sbjct: 154 HEGEHGGYKEIISRVSGDSVYSKLKFESGAHRVQRVPVTEAQGRIHTSACTVAVLPEADE 213 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +I+I D ++DTYR++GAGGQHVNTTDSAVR+TH+PTG VV+CQ+ERSQHKN+A+A Sbjct: 214 IGDIDIRPEDLKMDTYRSTGAGGQHVNTTDSAVRLTHLPTGTVVECQEERSQHKNRAKAL 273 Query: 278 NMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332 +LRA+L + Q R+ E+ + +G G +IR+Y P + D R N+ Sbjct: 274 ALLRARLLSNAQDAQTRQ----TSEARRQLVGSGDRSERIRTYNF-PQGRLTDHRINLTL 328 Query: 333 TSPSDVLDGDLDDFMKATL 351 +++++GDL + +++ + Sbjct: 329 YRLNEIVEGDLSEVVQSLM 347 >gi|224373415|ref|YP_002607787.1| peptide chain release factor 1 [Nautilia profundicola AmH] gi|254790893|sp|B9L5Z9|RF1_NAUPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|223590043|gb|ACM93779.1| peptide chain release factor 1 [Nautilia profundicola AmH] Length = 355 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 90/207 (43%), Positives = 130/207 (62%), Gaps = 8/207 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ + LL+ Y R+A+ + +K E + + G K LLI Sbjct: 104 DDKNIFLEIRAGTGGDEAALFVGDLLKAYLRYADNKGWKVEIVSESKSDAGGYKEIILLI 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG + Y LK E G HR+ RI +S R HTS ++ + P VDD ++IE+ D +I+ Sbjct: 164 KGESVYSRLKYEGGTHRVQRIPATESQGRIHTSAVTVAIMPEVDD-VDIELDPKDIKIEV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 RA GAGGQHVN T+SAVR+THIPTG+ V Q ERSQ +NK +A +L+A+++E LE Sbjct: 223 MRAGGAGGQHVNKTESAVRMTHIPTGITVSMQDERSQQRNKEKAMQILKARVFEKLE--- 279 Query: 292 REEIANIGESSKTEIGWG---RQIRSY 315 E +A IGE+ K+++G G +IR+Y Sbjct: 280 NERLAAIGEARKSQVGSGDRSERIRTY 306 >gi|261837535|gb|ACX97301.1| peptide chain release factor RF-1 [Helicobacter pylori 51] Length = 352 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|317181378|dbj|BAJ59162.1| peptide chain release factor 1 [Helicobacter pylori F57] gi|332672916|gb|AEE69733.1| peptide chain release factor RF1 [Helicobacter pylori 83] Length = 352 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|297379299|gb|ADI34186.1| peptide chain release factor 1 [Helicobacter pylori v225d] Length = 352 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|308062940|gb|ADO04827.1| peptide chain release factor 1 [Helicobacter pylori Sat464] Length = 352 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|217034576|ref|ZP_03439984.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10] gi|216942931|gb|EEC22416.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10] Length = 352 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|169838094|ref|ZP_02871282.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [candidate division TM7 single-cell isolate TM7a] Length = 190 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 88/171 (51%), Positives = 119/171 (69%), Gaps = 4/171 (2%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 M+TR+AE+ ++KTE +E ++ G+K T LIKG AY LK E GVHR+ R+ +S+ Sbjct: 1 MFTRYAERNRWKTEIIEKNEIGVGGLKEVTFLIKGHGAYSRLKFESGVHRVQRVPATESS 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V P +DD E+EI+ SD +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+ Sbjct: 61 GRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGL 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG 309 VV Q RSQ KNK A +L +KLYE+E +K R + N ++++G G Sbjct: 121 VVTSQDGRSQIKNKEAAMKVLVSKLYEMECEKQRSAVEN---ERRSQVGSG 168 >gi|208434043|ref|YP_002265709.1| peptide chain release factor RF-1 [Helicobacter pylori G27] gi|238058715|sp|B5Z680|RF1_HELPG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|208431972|gb|ACI26843.1| peptide chain release factor RF-1 [Helicobacter pylori G27] Length = 352 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|308177036|ref|YP_003916442.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117] gi|307744499|emb|CBT75471.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117] Length = 357 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 158/291 (54%), Gaps = 21/291 (7%) Query: 80 DDCSILQETSDNLQRIKLEV-----EYKQFESLLS------GEADSNDAYLEVHAGAGGT 128 DD QE +D EV E Q E L E D + LEV G GG Sbjct: 56 DDLEAAQEMADEDPDFAEEVQALTEELPQLEEKLRRLLIPRDENDGRNVILEVKGGEGGD 115 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLK 182 E+ +A LLRMYTR+AE + +K E + ++ + G K A + IKG Y LK Sbjct: 116 EAALFAADLLRMYTRFAEHKGWKVEMISFNESDLGGYKDAQVAIKGNSNDPAEGVYAQLK 175 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S R HTS + + V P VD+ E++I ++D +ID YR+SG GGQ Sbjct: 176 FEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEEVDIHQNDLKIDVYRSSGPGGQS 235 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL--YELELQKREEIANIGE 300 VNTTDSAVRITH+PTG+VV Q E+SQ +N+ A +LR++L ++ E+ +E A Sbjct: 236 VNTTDSAVRITHLPTGIVVAMQNEKSQIQNREAAMRVLRSRLLAHQQEIIDKENSAQRAS 295 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +T + +IR+Y P + D RT + + V+DGDL +++ + Sbjct: 296 QIRT-MDRSERIRTYNY-PENRIADHRTGYKAYNLDAVMDGDLQPVVESCI 344 >gi|317179532|dbj|BAJ57320.1| peptide chain release factor 1 [Helicobacter pylori F30] Length = 352 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSKLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|149183883|ref|ZP_01862274.1| peptide chain release factor 1 [Bacillus sp. SG-1] gi|148848402|gb|EDL62661.1| peptide chain release factor 1 [Bacillus sp. SG-1] Length = 253 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 143/242 (59%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +EV AGG E+ +A L RMY+R+AE + +KTE +E + G K +I Sbjct: 3 DDKNVIMEVRGAAGGDEAALFAGDLYRMYSRFAEAQGWKTEVMEANSTGVGGYKEIIFMI 62 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E G HR+ R+ +S R HTS +++ P ++ +EI+I E D R+DT Sbjct: 63 NGNGAYSKMKYENGAHRVQRVPETESGGRIHTSTATVACLPEAEE-VEIDIHEKDIRVDT 121 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ + Q R Sbjct: 122 FASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYD-KFQ-R 179 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A + K+ +G G +IR+Y P V D R + +L+G +D+ + A Sbjct: 180 EVQAEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKMDEVIDA 238 Query: 350 TL 351 + Sbjct: 239 LI 240 >gi|308061372|gb|ADO03260.1| peptide chain release factor 1 [Helicobacter pylori Cuz20] Length = 352 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|295400673|ref|ZP_06810650.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius C56-YS93] gi|294977254|gb|EFG52855.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius C56-YS93] Length = 358 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 125/347 (36%), Positives = 191/347 (55%), Gaps = 12/347 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +F+ AV+ R LN DP + + + + +E+ L+ + +E + +L D Sbjct: 1 MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVCKQLDD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 +LE L+ + +++E D L++ + E+ K LL + D + +E+ A AGG Sbjct: 61 AKAMLEEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +KTE +E G K I G AY LK E G Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P +++ IE+EI+E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEMEE-IEVEINEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQ--EARAEYDQTRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + VLDG LD+ ++A + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALI 343 >gi|311743960|ref|ZP_07717766.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272] gi|311313090|gb|EFQ83001.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272] Length = 353 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 120/333 (36%), Positives = 175/333 (52%), Gaps = 23/333 (6%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI- 84 L K DP + + ++AK + + L I +E Q D EL +++D + Sbjct: 15 LERKMADPSVHADPVQAKRIGQRYAELTAVIRTYREWQQTGDDLQAARELRMDDDVVQLE 74 Query: 85 --LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 L E + LQR+ + + D+ D LE+ G GG ES +A LLRMYT Sbjct: 75 ARLPELGERLQRLLVPRD----------PGDAKDVILEIKGGEGGEESALFAADLLRMYT 124 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISP 195 R+AE+R ++ + L+ + G KS T +K G LK E GVHR+ R+ Sbjct: 125 RFAERRGWRVDILDSTESALGGYKSVTAAVKARSTPEPGEAPGALLKFEGGVHRVQRVPV 184 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS + + V P +D +++EI +SD RID YR+SG GGQ VNTTDSAVRITH+ Sbjct: 185 TESQGRIHTSAAGVLVLPEAED-VDVEIHDSDLRIDVYRSSGPGGQSVNTTDSAVRITHV 243 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314 PTGVV CQ E+SQ +NK QA +LRA+L E + A+ S+ + ++R+ Sbjct: 244 PTGVVASCQNEKSQLQNKEQALRILRARLLEAAQATADAEASDARRSQIRTVDRSERVRT 303 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 Y P + D RT + + V+DG L+D + Sbjct: 304 YNF-PENRISDHRTGFKAYNLDAVMDGGLEDVI 335 >gi|260663282|ref|ZP_05864173.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN] gi|260552134|gb|EEX25186.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN] Length = 362 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 117/350 (33%), Positives = 182/350 (52%), Gaps = 18/350 (5%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68 +FD AV R LN DP + + L +E L + + KE+ + D Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKD 65 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAG 124 + E+ EE D +++ T + L K Q E +L D ND +E+ Sbjct: 66 DT---EMLREESDPDLVEMTKEELNETKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGA 122 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L MY R+AEK+ + E ++ ++ E G K L+I G Y LK E Sbjct: 123 AGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFE 182 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ RI +S R HTS +++ V P +D +++++ D R+D YR+SGAGGQH+N Sbjct: 183 NGAHRVQRIPATESAGRVHTSTATVGVMPEAED-VDVDLDPKDIRVDVYRSSGAGGQHIN 241 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ Q +E + K Sbjct: 242 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQ--QEQSEYDAQRKN 299 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IG G +IR+Y P V D R + ++ GDL++ +++ + Sbjct: 300 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLI 348 >gi|167752375|ref|ZP_02424502.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216] gi|167660616|gb|EDS04746.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216] Length = 361 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 94/236 (39%), Positives = 138/236 (58%), Gaps = 7/236 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +E+ G GG E+ +A L+RMYT++ E + +K E +G G K + + Sbjct: 111 DAKNAIVEIRGGTGGDEAAIFAGDLMRMYTKYIESKGWKYEITSFSEGTAGGYKEVVMKV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ ++EIS +D R D Sbjct: 171 TGNNVYGTLKYESGVHRVQRVPQTETQGRVHTSAASVAVLPEAEE-FDVEISMNDIRKDI 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + ASG GGQ VNTT SA+R+THIPTG+VVQCQ ++SQ KN +A+ LR +++ LE K Sbjct: 230 FCASGPGGQSVNTTYSAIRLTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKY 289 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + I KT + G +IR+Y P + D R N + S +DGD+ D Sbjct: 290 --LDEIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQD 342 >gi|224131216|ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|222861802|gb|EEE99344.1| predicted protein [Populus trichocarpa] Length = 416 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 111/339 (32%), Positives = 187/339 (55%), Gaps = 27/339 (7%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ K DP + N E + L + LD +S K +D C+ ++ AL ++D + Sbjct: 68 LSVKLGDPDVVSNPSEYQKLAQSVAELDEVVSIFKRFKD--CEKMLEDTRALAKEDGN-- 123 Query: 86 QETSDNLQRIKLEVE-----YKQFES------LLSGEADSNDAYLEVHAGAGGTESQDWA 134 D + I E+E KQ E L S D+ + LEV AG GG E+ WA Sbjct: 124 --DEDMAEMIAYEIESLSSELKQLEEKLTVLLLPSDPLDARNILLEVRAGTGGDEAGLWA 181 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L+RMY R++E+ +K + + E+ G K+ + +KG + Y LK E GVHR+ R+ Sbjct: 182 GDLVRMYQRYSEQNSWKVSVISSSEAEKGGYKTYVMEVKGKSVYSKLKYESGVHRVQRVP 241 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ + P VD+ +E+ I + + T R+ GAGGQ+VN ++AV + H Sbjct: 242 QTEAQGRVHTSTATVAIMPEVDE-VEVVIDPKEYELTTARSGGAGGQNVNKVETAVDLIH 300 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+ + C +ER+Q +N+ +A +LRAKLYE+++++++E +I K ++G G + Sbjct: 301 KPTGIRIFCTEERTQLQNRNRALQLLRAKLYEIKVREQQE--SIRNQRKMQVGTGARAEK 358 Query: 312 IRSYVLQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKA 349 IR+Y + ++ L+ N E TS L GD+++ ++A Sbjct: 359 IRTYNYKDNRVTDHRLKVNFELTS---FLAGDIENAVQA 394 >gi|213421201|ref|ZP_03354267.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 148 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 89/145 (61%), Positives = 111/145 (76%), Gaps = 1/145 (0%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ + Sbjct: 1 SSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQND 60 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG QIRSYVL + +KDL Sbjct: 61 RSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDDSR-IKDL 119 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATL 351 RT +E + VLDG LD F++A+L Sbjct: 120 RTGVETRNTQAVLDGSLDQFIEASL 144 >gi|315926256|ref|ZP_07922444.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus ATCC 23263] gi|315620443|gb|EFV00436.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus ATCC 23263] Length = 173 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 84/146 (57%), Positives = 105/146 (71%), Gaps = 2/146 (1%) Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HRLVRISP+D+ RR TSF+ + V PVV+++ ++I SD R+D + ASG GGQ VNT Sbjct: 1 GTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPGSDLRVDVFHASGPGGQGVNT 60 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 61 TDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLKSEG 118 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIE 331 WG Q+RSYVL PYQMVKDLRTN E Sbjct: 119 NSWGAQMRSYVLHPYQMVKDLRTNHE 144 >gi|239928894|ref|ZP_04685847.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672] gi|291437221|ref|ZP_06576611.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672] gi|291340116|gb|EFE67072.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672] Length = 355 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 101/248 (40%), Positives = 145/248 (58%), Gaps = 10/248 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158 Query: 172 IK-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ +++EI+ Sbjct: 159 VKARGQVEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VDVEIN 217 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L Sbjct: 218 PNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRL 277 Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 + ++ E A S+ + +IR+Y P + D R + + VLDGDL Sbjct: 278 LAMAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDL 336 Query: 344 DDFMKATL 351 ++A + Sbjct: 337 GAVIQACV 344 >gi|182415309|ref|YP_001820375.1| peptide chain release factor 1 [Opitutus terrae PB90-1] gi|177842523|gb|ACB76775.1| peptide chain release factor 1 [Opitutus terrae PB90-1] Length = 383 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 114/352 (32%), Positives = 184/352 (52%), Gaps = 14/352 (3%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + L D +RL L+ + +P + N A + RE+Q L ++ +E DRL Sbjct: 6 LESMDELPDLAPFQRRLDELDAQMAEPTFYANARRAAEVSREQQKLQQLVADYQEY-DRL 64 Query: 67 CDNL-----ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLE 120 + + A + D + Q L+R + + +++ + DS + +E Sbjct: 65 GREAAEAAALGKDPAADPDLRELAQAELPELERRRAALRQAVLLAMIPPDPTDSRNTVME 124 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG GG E+ +A L RMY+R+A+ + +K + + E G K LI G + Y Sbjct: 125 IRAGTGGDEASLFAADLFRMYSRYADGQGWKIQPMSSSMSERGGFKEVIFLISGTDVYKR 184 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHR+ R+ ++N R HTS ++ V P ++ ++++I + I RASG GG Sbjct: 185 LKFESGVHRVQRVPVTEANGRIHTSTVTVAVLPEAEE-VDVQIDPQELEITVTRASGPGG 243 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAV+I H PTG++V C ERSQ KNKA+A +LR++L L+ ++ EE A Sbjct: 244 QGVNTTDSAVQIVHKPTGLIVTCADERSQIKNKAKALTVLRSRL--LQRREEEERAKYAA 301 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + +++IG G +IR+Y P + D R + + VL+G +D + A Sbjct: 302 TRRSQIGSGDRSERIRTYNF-PQNRLTDHRIGLTLYNLPQVLEGGIDPIIAA 352 >gi|72162818|ref|YP_290475.1| peptide chain release factor 1 [Thermobifida fusca YX] gi|119361632|sp|Q47M70|RF1_THEFY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71916550|gb|AAZ56452.1| bacterial peptide chain release factor 1 (bRF-1) [Thermobifida fusca YX] Length = 355 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 125/335 (37%), Positives = 176/335 (52%), Gaps = 18/335 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP + + +A+ L + L ++ +E+ D ELA E D S Sbjct: 13 LEQQLADPAVHADQAQARTLAKRYSQLTPIVATYRELNRVESDIETAQELAAE--DPSFA 70 Query: 86 QETSD-NLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 E QR +L ++ +LL D D LEV AG GG ES +A+ L+RMY Sbjct: 71 DEAKQLAAQREEL---VQRLRTLLIPRDPNDDKDVILEVKAGEGGEESALFASDLVRMYL 127 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISP 195 R+AE++ +KTE + + G K T+ IK G + LK E GVHR+ R+ Sbjct: 128 RYAERQGWKTEIISATHSDLGGYKDITIAIKNRGTVEPGQGVWHRLKFEGGVHRVQRVPV 187 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS + V P ++ IE+EI+ESD RID YR+SG GGQ VNTTDSAVRITH+ Sbjct: 188 TESQGRIHTSAVGVLVLPEAEE-IEVEINESDLRIDVYRSSGPGGQSVNTTDSAVRITHL 246 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314 PTG+VV CQ E+SQ +NK QA +LRA+L E A S+ + ++R+ Sbjct: 247 PTGIVVSCQNEKSQLQNKEQALRVLRARLLAEAQAAAEAEAAAERRSQVRTVDRSERVRT 306 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 Y P + D R + + VLDG+LD ++A Sbjct: 307 YNF-PENRISDHRVGYKAYNLDQVLDGELDGVIQA 340 >gi|290957365|ref|YP_003488547.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22] gi|260646891|emb|CBG69988.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22] Length = 358 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 102/251 (40%), Positives = 145/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ +++ Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D RID YR+SG GGQ VNTTDSAVRITHIPTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EINANDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L ++ E A S+ + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKSYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 G+LD ++A + Sbjct: 337 GELDAVIQACV 347 >gi|311898376|dbj|BAJ30784.1| putative peptide chain release factor 1 [Kitasatospora setae KM-6054] Length = 358 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 100/247 (40%), Positives = 146/247 (59%), Gaps = 10/247 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LEV AG GG ES +A LLRMY R+AE+ +KTE ++ ++ + G K ++ + Sbjct: 100 DDKDVILEVKAGEGGEESALFAGDLLRMYLRYAERVGWKTELIDANESDLGGYKDVSVAV 159 Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K G + LK E GVHR+ R+ +S R HTS + + V P ++ +E+EI Sbjct: 160 KTRGSAEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VEVEIHA 218 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITH+PTG+V CQ E+SQ +NK QA +LR++L Sbjct: 219 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLL 278 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ E A+ S+ + +IR+Y P + D RT + + VLDGDL+ Sbjct: 279 AAAQEEAEREASDARRSQVRTVDRSERIRTYNF-PENRISDHRTGFKSYNLDQVLDGDLN 337 Query: 345 DFMKATL 351 +++ + Sbjct: 338 AVIQSCV 344 >gi|227514467|ref|ZP_03944516.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC 14931] gi|227087153|gb|EEI22465.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC 14931] gi|299782948|gb|ADJ40946.1| Peptide chain release factor 1 (RF-1) [Lactobacillus fermentum CECT 5716] Length = 362 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 117/350 (33%), Positives = 182/350 (52%), Gaps = 18/350 (5%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68 +FD AV R LN DP + + L +E L + + KE+ + D Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKD 65 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAG 124 + E+ EE D +++ T + L K Q E +L D ND +E+ Sbjct: 66 DT---EMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGA 122 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L MY R+AEK+ + E ++ ++ E G K L+I G Y LK E Sbjct: 123 AGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFE 182 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ RI +S R HTS +++ V P +D +++++ D R+D YR+SGAGGQH+N Sbjct: 183 NGAHRVQRIPATESAGRVHTSTATVGVMPEAED-VDVDLDPKDIRVDVYRSSGAGGQHIN 241 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ Q +E + K Sbjct: 242 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQ--QEQSEYDAQRKN 299 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IG G +IR+Y P V D R + ++ GDL++ +++ + Sbjct: 300 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLI 348 >gi|89095600|ref|ZP_01168494.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911] gi|89089346|gb|EAR68453.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911] Length = 357 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 119/351 (33%), Positives = 186/351 (52%), Gaps = 20/351 (5%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 ++D AV+ R LN DP + + + + +E+ + + KE++ + D Sbjct: 1 MYDRLQAVEDRYERLNELLSDPEIVNDTKKLREYSKEQSGIQETVEAYREYKEVRGQYQD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQ-RIK-LEVEYKQFESLLSGEADSND---AYLEVHA 123 +LE L+ + +++E L+ R++ LE K +L D ND +E+ Sbjct: 61 AKAMLEEKLDAEMREMVKEEIGELEDRVEALEARLK----ILLIPKDPNDDKNVIMEIRG 116 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 AGG E+ +A L RMY+R+AE + +KT+ +E G K +I G A+ LK Sbjct: 117 AAGGDEAALFAGDLYRMYSRFAEVQGWKTDVIEASSTGVGGYKEIIFIINGNGAFSKLKF 176 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS +++ V P ++ +EIEI + D R+DT+ +SG GGQ V Sbjct: 177 ENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE-VEIEIHDKDIRVDTFASSGPGGQSV 235 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVR+TH+PTG VV CQ E+SQ KNK +A +LRA++Y+ Q E A + K Sbjct: 236 NTTMSAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYDQQRK 293 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +G G +IR+Y P V D R + +L G LD+ + A + Sbjct: 294 SAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDEVIDALI 343 >gi|320008549|gb|ADW03399.1| peptide chain release factor 1 [Streptomyces flavogriseus ATCC 33331] Length = 358 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 100/251 (39%), Positives = 145/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVLLEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + +K E GVHR+ R+ +S R HTS + + V P ++ +++ Sbjct: 159 VKTKGGNGATEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L + +E +++ S + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEAAEQEASDVRRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 GDLD ++A + Sbjct: 337 GDLDAVIQACV 347 >gi|134102728|ref|YP_001108389.1| putative peptide chain release factor 1 [Saccharopolyspora erythraea NRRL 2338] gi|291007815|ref|ZP_06565788.1| putative peptide chain release factor 1 [Saccharopolyspora erythraea NRRL 2338] gi|133915351|emb|CAM05464.1| putative peptide chain release factor 1 [Saccharopolyspora erythraea NRRL 2338] Length = 357 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 126/339 (37%), Positives = 185/339 (54%), Gaps = 14/339 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP + + A+ L R L + KE+ D ELA D+ Sbjct: 16 LERRLADPEVHADQAGARKLGRRYAELTPVVRCSKELDQARSDLATARELA---DEDPAF 72 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E +++L +E K E LL + D++D LEV +G GG ES +A LLRMY R+ Sbjct: 73 AEEAESLAESVPALEAKLTELLLPRDPHDASDVLLEVKSGEGGEESALFAGDLLRMYLRF 132 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIK------GPNA-YGWLKGEQGVHRLVRISPYD 197 AE++ ++TE L+ + + G K AT+ +K GP+ + LK E GVHR+ R+ + Sbjct: 133 AERQGWRTEILDATESDLGGYKDATVAVKTKAGDTGPDGVWSKLKFEGGVHRVQRVPVTE 192 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS + + + + +E+E+ E D RID YR+SG GGQ VNTTDSAVRITH+PT Sbjct: 193 SQGRVHTSAAGV-LVYPEPEEVEVEVDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHLPT 251 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYV 316 G+VV CQ E+SQ +NK +A +LRA+L L ++ E A+ S+ + +IR+Y Sbjct: 252 GIVVSCQNEKSQLQNKIRAIQVLRARLQALAEEEAEREASETRRSQVRTVDRSERIRTYN 311 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P + D R N + + VLDGDLD + A +A + Sbjct: 312 F-PENRISDHRVNYKAYNLDQVLDGDLDGVLGALVAADR 349 >gi|282861117|ref|ZP_06270182.1| peptide chain release factor 1 [Streptomyces sp. ACTE] gi|282563775|gb|EFB69312.1| peptide chain release factor 1 [Streptomyces sp. ACTE] Length = 358 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 100/251 (39%), Positives = 145/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVLLEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + +K E GVHR+ R+ +S R HTS + + V P ++ +++ Sbjct: 159 VKTKGGNGATEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L + +E +++ S + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEAAEQEASDVRRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 GDLD ++A + Sbjct: 337 GDLDAVIQACV 347 >gi|295836498|ref|ZP_06823431.1| peptide chain release factor 1 [Streptomyces sp. SPB74] gi|197699008|gb|EDY45941.1| peptide chain release factor 1 [Streptomyces sp. SPB74] Length = 357 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 101/250 (40%), Positives = 145/250 (58%), Gaps = 12/250 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE L+ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEILDATESELGGYKDVQVA 158 Query: 172 IK---------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 +K G + +K E GVHR+ R+ +S R HTS + + V P ++ +++E Sbjct: 159 VKTKGNANPEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDVE 217 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR+ Sbjct: 218 INPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRS 277 Query: 283 KLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +L ++ E A S+ + +IR+Y P + D R + + VLDG Sbjct: 278 RLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDG 336 Query: 342 DLDDFMKATL 351 +LD ++A + Sbjct: 337 ELDAVIQACV 346 >gi|86606113|ref|YP_474876.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab] gi|119361625|sp|Q2JUK1|RF1_SYNJA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|86554655|gb|ABC99613.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab] Length = 361 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 97/244 (39%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L RMYTR+AEK + + +GE G K A L I Sbjct: 113 DEKNIMLEIRAGTGGEEAALWAADLARMYTRYAEKMGWSVRLASLSEGEMGGYKEAILEI 172 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ ++ R HTS +++ V P VD+ +E+ I D I T Sbjct: 173 RGDQVYSKLKFEAGVHRVQRVPVTEAQGRVHTSTATVAVMPEVDE-VEVVIDPKDIEIKT 231 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C +ERSQ +N+ +A +LRAKLYE++LQ Sbjct: 232 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQ-- 289 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A+I + + ++G G +IR+Y + + V D R N + +L+G+LD+ ++A Sbjct: 290 EQQASISSARRMQVGTGSRSEKIRTYNYKDNR-VTDHRLN-QNFLLEPILEGELDELIQA 347 Query: 350 TLAI 353 + + Sbjct: 348 CIGL 351 >gi|256833004|ref|YP_003161731.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603] gi|256686535|gb|ACV09428.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603] Length = 361 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 100/247 (40%), Positives = 143/247 (57%), Gaps = 9/247 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS D LE+ AG GG ES +A LLRMY R+AE++ ++TE + + + G K + + Sbjct: 103 DSRDVILEIKAGEGGAESALFAADLLRMYLRYAERQGWRTEIIGATESDLGGYKDVQVAV 162 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K P W LK E GVHR+ R+ +S R HTS + V+P V+D E+EI + Sbjct: 163 KARGQVTPEEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAVGVLVFPEVEDEGELEIDQ 222 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITHIPTG+VV Q E+SQ +N+ QA +LRA+L Sbjct: 223 NDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVSMQNEKSQLQNREQAMRVLRARLL 282 Query: 286 -ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + ++ S + +IR+Y P + D RT + + VLDGD+ Sbjct: 283 AARQEEAAAAAQDMRRSQVRTVDRSERIRTYNF-PENRIADHRTGFKSYNLDQVLDGDVQ 341 Query: 345 DFMKATL 351 +++ + Sbjct: 342 PVVQSAI 348 >gi|184154903|ref|YP_001843243.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956] gi|238692951|sp|B2GAT1|RF1_LACF3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183226247|dbj|BAG26763.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956] Length = 360 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 117/350 (33%), Positives = 182/350 (52%), Gaps = 18/350 (5%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68 +FD AV R LN DP + + L +E L + + KE+ + D Sbjct: 4 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAG 124 + E+ EE D +++ T + L K Q E +L D ND +E+ Sbjct: 64 DT---EMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGA 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L MY R+AEK+ + E ++ ++ E G K L+I G Y LK E Sbjct: 121 AGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ RI +S R HTS +++ V P +D +++++ D R+D YR+SGAGGQH+N Sbjct: 181 NGAHRVQRIPATESAGRVHTSTATVGVMPEAED-VDVDLDPKDIRVDVYRSSGAGGQHIN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ Q +E + K Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQ--QEQSEYDAQRKN 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IG G +IR+Y P V D R + ++ GDL++ +++ + Sbjct: 298 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLI 346 >gi|12045113|ref|NP_072924.1| peptide chain release factor 1 [Mycoplasma genitalium G37] gi|255660257|ref|ZP_05405666.1| peptide chain release factor 1 [Mycoplasma genitalium G37] gi|1350577|sp|P47500|RF1_MYCGE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|1045950|gb|AAC71478.1| peptide chain release factor 1 [Mycoplasma genitalium G37] gi|166078949|gb|ABY79567.1| peptide chain release factor 1 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 359 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 117/322 (36%), Positives = 176/322 (54%), Gaps = 16/322 (4%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL-QETSDNLQRIK----- 96 K++ +E +H I KE+Q +L +N E L L +E L++IK Sbjct: 36 KVINKELKHKQPLIVKFKELQ-KLVENANEAEQILNNSSLKELHEEAKKELEKIKASLPS 94 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 LE E K F L E + + +E+ AGG ES + + L MY + + + E E Sbjct: 95 LEEEIK-FLLLPVDENNQKNVIVEIRPAAGGDESCIFLSDLFNMYKNYCTSKNWTVELNE 153 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 I GI + + G + + LK E GVHR+ R+ ++ R HTS ++ V P ++ Sbjct: 154 IIPAS-VGINFVSFAVNGTDVFAKLKFESGVHRVQRVPLTEAKGRVHTSTVTVAVLPQLE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +EI I+ SD RIDTYRASGAGGQHVN T+SAVRITH+PTG+VV CQ+ +SQ N+ +A Sbjct: 213 E-VEITINPSDLRIDTYRASGAGGQHVNRTESAVRITHLPTGIVVACQEGKSQFSNRDKA 271 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 MLRAKL+E K +++ + K+++G G +IR+Y P + D R + Sbjct: 272 MKMLRAKLWENAQNK--QLSTQADLRKSQVGSGERAEKIRTYNY-PQNRITDHRIKLTIN 328 Query: 334 SPSDVLDGDLDDFMKATLAIKK 355 + V+ GDLD+ ++A A +K Sbjct: 329 KLNTVILGDLDEIIEALQADEK 350 >gi|317010358|gb|ADU84105.1| peptide chain release factor 1 [Helicobacter pylori SouthAfrica7] Length = 352 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 95/244 (38%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G ++R+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERVRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|227495018|ref|ZP_03925334.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436] gi|226831470|gb|EEH63853.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436] Length = 369 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 121/337 (35%), Positives = 181/337 (53%), Gaps = 20/337 (5%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCSILQETS 89 DP + + + + L + L S IK D L LE A E ++D S E Sbjct: 27 DPEVLADRTQQRKLAKRFSEL----SVIKNAADALSMAADDLEAAKEMAKEDSSFAAEIP 82 Query: 90 DNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + + LE + + +L AD+++ LE+ AG GG ES +A L RMYTR+AE Sbjct: 83 E--MEVALEAAHARLVKILIPRDPADADNVILEIKAGEGGEESALFAAELARMYTRYAET 140 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQGVHRLVRISPYDSNS 200 + +K + L G+K +L I P W LK E GVHR+ R+ +S Sbjct: 141 KGWKVKELSSTYTGLGGVKEVSLSIAAKSDVAPEDGVWAHLKFEGGVHRVQRVPVTESQG 200 Query: 201 RRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS + V P V+D E + I ++D RID +R+SG GGQ VNTTDSAVRITHIPTGV Sbjct: 201 RIHTSAVGVLVTPEVEDDTEDLVIDQNDLRIDVFRSSGPGGQSVNTTDSAVRITHIPTGV 260 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318 VV Q E+SQ +NK A +LR++L +LE +K+E A+ +S+ + +IR+Y Sbjct: 261 VVSMQNEKSQLQNKEAAMRVLRSRLIQLEREKKEAEASAMRASQVRTVDRSERIRTYNF- 319 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P + D RT + + + VL+G+L +++ + +++ Sbjct: 320 PENRIADHRTGYKAYNLATVLEGELGPVIESAIVLEE 356 >gi|323172435|gb|EFZ58072.1| peptide chain release factor 1 [Escherichia coli LT-68] Length = 227 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 90/215 (41%), Positives = 134/215 (62%), Gaps = 6/215 (2%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ +S Sbjct: 1 MYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQ 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+ Sbjct: 61 GRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGI 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYV 316 VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + R+Y Sbjct: 121 VVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRNRTYN 178 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P V D R N+ +V++G LD ++ + Sbjct: 179 F-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPII 212 >gi|260577564|ref|ZP_05845503.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC 43734] gi|258604288|gb|EEW17526.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC 43734] Length = 358 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 148/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +E+ +GAGG E+ +A L RMY R+AE+ F TE L +++ + G+K TL I Sbjct: 103 DGDDIVMEIKSGAGGEEAALFAGELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSI 162 Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K P+ A+ K E GVHR+ RI +S R TS + + VYP D+ ++ I + D Sbjct: 163 RSKQPSRDGAWSEFKFEGGVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKD 222 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R+D YR+SG GGQ VNTTDSAVRITH+PT +VV CQ+ERSQ +N+A+A +L A+L +L Sbjct: 223 IRVDVYRSSGKGGQGVNTTDSAVRITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQL 282 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + ++ E A G +++ + +IR+Y P V D R + + VLDGDL+ Sbjct: 283 KEEEAEAEAAEGRAAQIRTMDRSERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLEAL 341 Query: 347 MKA 349 + A Sbjct: 342 LAA 344 >gi|68536431|ref|YP_251136.1| peptide chain release factor 1 [Corynebacterium jeikeium K411] gi|119361528|sp|Q4JUI9|RF1_CORJK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|68264030|emb|CAI37518.1| peptide chain release factor RF-1 [Corynebacterium jeikeium K411] Length = 358 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 101/243 (41%), Positives = 148/243 (60%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +E+ +GAGG E+ +A L RMY R+AE+ F TE L +++ + G+K TL I Sbjct: 103 DGDDIVMEIKSGAGGEEAALFAGELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSI 162 Query: 173 --KGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K P+ A+ K E GVHR+ RI +S R TS + + VYP D+ ++ I + D Sbjct: 163 RSKQPSRDGAWSEFKFEGGVHRVQRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKD 222 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R+D YR+SG GGQ VNTTDSAVRITH+PT +VV CQ+ERSQ +N+A+A +L A+L +L Sbjct: 223 IRVDVYRSSGKGGQGVNTTDSAVRITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQL 282 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + ++ E A G +++ + +IR+Y P V D R + + VLDGDL+ Sbjct: 283 KEEEAEAEAAEGRAAQIRTMDRSERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLEAL 341 Query: 347 MKA 349 + A Sbjct: 342 LAA 344 >gi|307722037|ref|YP_003893177.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas autotrophica DSM 16294] gi|306980130|gb|ADN10165.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas autotrophica DSM 16294] Length = 355 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 146/244 (59%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ + L YTR+A+ + +K E + + G K LI Sbjct: 104 DDRNIIVELRAGAGGDEAAIFVGDLFDAYTRYADLKGWKIELMSSSPSDAGGYKEVVALI 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ V P VDD +EIEI+E+D +ID Sbjct: 164 KGEQVYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDD-VEIEINENDLKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQ VNTTDSAVRITH+P+G+VV Q ++SQHKN+ +A +L+A+LY+L++Q+ Sbjct: 223 MRSSGCGGQSVNTTDSAVRITHLPSGLVVTNQDQKSQHKNREKAMKVLKARLYDLQMQEA 282 Query: 293 EEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 + A ++G G +IR+Y P + D R N+ ++++ G LD+ ++ Sbjct: 283 Q--AEDAAQRAAQVGTGDRSGRIRTYNY-PQNRISDHRINLTLYRLNEIMSGGLLDEIIE 339 Query: 349 ATLA 352 +A Sbjct: 340 PLIA 343 >gi|220913097|ref|YP_002488406.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6] gi|254790860|sp|B8HB03|RF1_ARTCA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219859975|gb|ACL40317.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6] Length = 357 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 99/248 (39%), Positives = 147/248 (59%), Gaps = 12/248 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + LEV G GG E+ +A LLRMYTR+AE R +KTE + + + G K + + Sbjct: 100 DARNVILEVKGGEGGDEAALFAGDLLRMYTRYAESRGWKTEIISATESDLGGYKDVQVAV 159 Query: 173 KGPN------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG + Y LK E GVHR+ R+ +S R HTS + + V P VD+ E+EI+++ Sbjct: 160 KGSSNDPAEGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQN 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ +LRA++ Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARI-- 277 Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L Q+ + A E K++I +IR+Y P + D RT + + V++GDL Sbjct: 278 LAHQQEQIDAANSEQRKSQIRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDL 336 Query: 344 DDFMKATL 351 + +++ + Sbjct: 337 EPVIQSAI 344 >gi|290982185|ref|XP_002673811.1| predicted protein [Naegleria gruberi] gi|284087397|gb|EFC41067.1| predicted protein [Naegleria gruberi] Length = 324 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 103/251 (41%), Positives = 151/251 (60%), Gaps = 19/251 (7%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR--KFKTEALEIHDGEEAGIKSAT 169 + +++A +E+ G GG E+ +A L +MY +A KR KF+ +L ++G E G K Sbjct: 50 SPNSNAIIEIRPGTGGDEASLFAMELFKMYEFYATKRGWKFEVLSLSANNGGE-GCKEGI 108 Query: 170 LLIKGPN--------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 LI G + YG +K E GVHR+ R+ +S R HTS +SI V P V ++ ++ Sbjct: 109 ALISGSSYGDDEGLGVYGCMKFESGVHRVQRVPATESQGRVHTSSASIVVLPEVTEA-DV 167 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 +I+ +D RIDT RASGAGGQHVNTTDSAVR+THIPTG VV ERSQH+NK +A+ +L Sbjct: 168 KINLADVRIDTMRASGAGGQHVNTTDSAVRLTHIPTGTVVCIADERSQHRNKEKAFKILH 227 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 ++LY + Q+ E+I + K +IG G +IR+Y P + D R + + + Sbjct: 228 SRLY--QKQQDEKIQKMSSERKEQIGSGDRSDKIRTYNF-PQDRITDHRISFSQFGLDKM 284 Query: 339 LDGD-LDDFMK 348 +DG+ LD F + Sbjct: 285 MDGEILDSFFE 295 >gi|29829454|ref|NP_824088.1| peptide chain release factor 1 [Streptomyces avermitilis MA-4680] gi|46576778|sp|Q82J70|RF1_STRAW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|29606562|dbj|BAC70623.1| putative peptide chain release factor 1 [Streptomyces avermitilis MA-4680] Length = 358 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 101/251 (40%), Positives = 144/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + +K E GVHR+ R+ +S R HTS + + V P ++ +++ Sbjct: 159 VKTKGGQGATEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L ++ E A S+ + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 GDLD ++A + Sbjct: 337 GDLDAMIQACV 347 >gi|323339960|ref|ZP_08080227.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644] gi|323092602|gb|EFZ35207.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644] Length = 362 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 171/296 (57%), Gaps = 12/296 (4%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEA-DSND 116 K++ ++ D+ +L L+++ ++++E + ++ KLE E K LL + D D Sbjct: 57 KQVVQQIKDDEEMLSTGLDDEMAAMVKEELSDSKNEKQKLEQEIKIL--LLPKDPNDGKD 114 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGG E+ +A L MY+++AE++ + E ++ + E G K L I G N Sbjct: 115 LIMEIRGAAGGDEASLFAADLFSMYSKYAERQGWSIEVIDKNMTEVGGFKEIALTINGKN 174 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + LK E G HR+ R+ +S R HTS +++ V P +D +EI++ D R+D YR+S Sbjct: 175 VWSKLKYESGAHRVQRVPVTESAGRVHTSTATVVVMPEEED-VEIDLDPKDIRVDVYRSS 233 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L+A++Y + K +E + Sbjct: 234 GAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVY--DYYKSQEQS 291 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ K+ +G G +IR+Y P V D R + +++G+LDD + A Sbjct: 292 EYDENRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELDDVIDA 346 >gi|239982315|ref|ZP_04704839.1| peptide chain release factor 1 [Streptomyces albus J1074] gi|291454159|ref|ZP_06593549.1| peptide chain release factor 1 [Streptomyces albus J1074] gi|291357108|gb|EFE84010.1| peptide chain release factor 1 [Streptomyces albus J1074] Length = 358 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 102/251 (40%), Positives = 146/251 (58%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTELIDSTESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ I++ Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-IDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+++D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EINQNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILR 277 Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L ++ E A S+ + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 G+LD ++A + Sbjct: 337 GELDAVIQACV 347 >gi|78358024|ref|YP_389473.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|119361534|sp|Q30X18|RF1_DESDG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78220429|gb|ABB39778.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 357 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 91/236 (38%), Positives = 135/236 (57%), Gaps = 7/236 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 LE+ AG GG E+ +A L RMY R+AE ++ E L + + G K LI G Y Sbjct: 111 LEIRAGTGGEEAALFAADLFRMYLRYAEDMGWRVEVLSSSETDSGGFKEIIGLISGDKVY 170 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 +K E G HR+ R+ ++ R HTS +++ V P D+ +E+++ D R D YR+SG Sbjct: 171 SRMKFESGTHRVQRVPATETQGRIHTSAATVAVMPEADE-VELDMKPEDLRFDVYRSSGP 229 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+THIPTG+ V CQ E+SQHKNKA+ +L ++L + + KR E + Sbjct: 230 GGQSVNTTDSAVRVTHIPTGITVACQDEKSQHKNKAKGLKILASRLLQAQEDKRHE--EL 287 Query: 299 GESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E ++ +G G +IR+Y P + D R N+ ++G + D + A + Sbjct: 288 AEQRRSLVGTGDRSGRIRTYNF-PQGRITDHRINLTLYKLDAFMEGQIGDMLDALI 342 >gi|314923482|gb|EFS87313.1| peptide chain release factor 1 [Propionibacterium acnes HL001PA1] gi|315092954|gb|EFT64930.1| peptide chain release factor 1 [Propionibacterium acnes HL060PA1] gi|315103525|gb|EFT75501.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA2] Length = 379 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 24/270 (8%) Query: 94 RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R +L++ + LL S D DA +E+H+G GG ES +A LLRMY R+AE+ + Sbjct: 101 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 160 Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 L + G ++ + + G P AYG+LK E GVHR+ R+ +S+ R HTS Sbjct: 161 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 220 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS Sbjct: 221 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 279 Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q +NKA+A MLRAK+ E + +R+++ + S++ +R+Y P Sbjct: 280 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 330 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + D R + +L GDL D + A Sbjct: 331 ENRLTDHRIGYKSRKLDQILAGDLGDVLDA 360 >gi|297626232|ref|YP_003687995.1| peptide chain release factor 1 (RF-1) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921997|emb|CBL56559.1| Peptide chain release factor 1 (RF-1) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 359 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 120/340 (35%), Positives = 176/340 (51%), Gaps = 14/340 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q + L + DP + + ++ + R L + + E Q D ELA D Sbjct: 10 QEFADLEKQLADPAVVSDQARSRKVGRRYSELTGVVHALDEHQQLTEDLSAARELA---D 66 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLL 138 D +D + +L+ + +LL+ DSNDA +E+ +G GG ES +A LL Sbjct: 67 DDPAFAAEADQIS-ARLDEVTDKLTALLAPRDPLDSNDAIMEIKSGEGGEESALFAGDLL 125 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQGVHRLVRI 193 MY +AE+ + TE ++ + G KS TL + YG LK E GVHR+ R+ Sbjct: 126 NMYQHFAEREGWSTEIIDAEPTDLGGFKSVTLAFRATGHDAQAPYGALKFEGGVHRVQRV 185 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS + + V P V++S EIEI+ D RID YR++G GGQ VNTTDSAVRIT Sbjct: 186 PVTESQGRIHTSAAGVLVMPDVEES-EIEINPDDLRIDVYRSTGKGGQGVNTTDSAVRIT 244 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQI 312 H+PTGVVV Q +RSQ +NK QA +LRA+L ++ + A S+ + +I Sbjct: 245 HLPTGVVVTSQDQRSQLQNKEQALRVLRARLVAAAEEQAAQQAEQARKSQVRTVDRSERI 304 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+Y P + D R + + VL G+L+ ++A A Sbjct: 305 RTYNF-PENRITDHRIGFKAHNLDAVLGGELEPLIEALQA 343 >gi|282853790|ref|ZP_06263127.1| peptide chain release factor 1 [Propionibacterium acnes J139] gi|282583243|gb|EFB88623.1| peptide chain release factor 1 [Propionibacterium acnes J139] Length = 361 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 24/270 (8%) Query: 94 RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R +L++ + LL S D DA +E+H+G GG ES +A LLRMY R+AE+ + Sbjct: 83 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 142 Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 L + G ++ + + G P AYG+LK E GVHR+ R+ +S+ R HTS Sbjct: 143 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 202 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS Sbjct: 203 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 261 Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q +NKA+A MLRAK+ E + +R+++ + S++ +R+Y P Sbjct: 262 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 312 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + D R + +L GDL D + A Sbjct: 313 ENRLTDHRIGYKSRKLDQILAGDLGDVLDA 342 >gi|269215990|ref|ZP_06159844.1| peptide chain release factor 1 [Slackia exigua ATCC 700122] gi|269130249|gb|EEZ61327.1| peptide chain release factor 1 [Slackia exigua ATCC 700122] Length = 356 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 101/247 (40%), Positives = 138/247 (55%), Gaps = 13/247 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD D +E+ AGG E+ +A L +MY R+ E R +K E L+ E G K Sbjct: 106 ADEKDIIVEIRGAAGGDEAAIFAGDLYKMYVRFCESRGWKVENLDASASEAGGFKKIEFK 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KG + Y +K E GVHR+ R+ +S R TS +++ V P D+ I++EI+E D RID Sbjct: 166 VKGDHVYSLMKFESGVHRVQRVPKTESQGRIQTSTATVAVLPEADE-IDVEINEGDLRID 224 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YRA G GGQ VNTTDSAVRITH+P+G+VVQ Q ++SQ +NK A +LRA+LYE L + Sbjct: 225 VYRAGGPGGQCVNTTDSAVRITHLPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAE 284 Query: 292 R------EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + E +A IG + E +IR+Y P V D R T +L L D Sbjct: 285 QQAAEGAERLAQIGSGDRAE-----KIRTYN-APQDRVTDHRIGYNGTYNGVLLADGLAD 338 Query: 346 FMKATLA 352 + A A Sbjct: 339 LIVALQA 345 >gi|326798862|ref|YP_004316681.1| peptide chain release factor 1 [Sphingobacterium sp. 21] gi|326549626|gb|ADZ78011.1| Peptide chain release factor 1 [Sphingobacterium sp. 21] Length = 357 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 104/301 (34%), Positives = 173/301 (57%), Gaps = 17/301 (5%) Query: 54 NAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 N IS I+ +D L + + L E+A E+ D ++Q+ + ++++L + K E Sbjct: 53 NIISNIETNKDILANEKDQELREMAKEDLDALLVQK-EEKEEKVRLMMIPKDPE------ 105 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D+ +A E+ G GG E+ +A L RMYTR+ +++ ++ E +++ +G G K L Sbjct: 106 -DAKNAIFEIRGGTGGDEAALFAGDLYRMYTRYFDQKGWRVEVMDVTEGTAGGYKEVILK 164 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G + YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ +++EI+ +D + Sbjct: 165 VSGEDVYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAEE-VDVEINPADIEMQ 223 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+ GAGGQ+VN ++ V++TH P+G+VV CQ ERSQ N+ A MLR KLYELE+QK Sbjct: 224 TSRSGGAGGQNVNKVETKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRTKLYELEVQK 283 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + +I KT + G +IR+Y P V + R + + ++DGD+ + + Sbjct: 284 KH--GDIAAKRKTMVSTGDRSAKIRTYNY-PQGRVTEHRIGLTMYNLPAIMDGDIQEIID 340 Query: 349 A 349 A Sbjct: 341 A 341 >gi|314981451|gb|EFT25545.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA3] Length = 379 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 24/270 (8%) Query: 94 RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R +L++ + LL S D DA +E+H+G GG ES +A LLRMY R+AE+ + Sbjct: 101 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 160 Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 L + G ++ + + G P AYG+LK E GVHR+ R+ +S+ R HTS Sbjct: 161 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 220 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS Sbjct: 221 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 279 Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q +NKA+A MLRAK+ E + +R+++ + S++ +R+Y P Sbjct: 280 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 330 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + D R + +L GDL D + A Sbjct: 331 ENRLTDHRIGYKSRKLDQILAGDLGDVLDA 360 >gi|294155813|ref|YP_003560197.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145] gi|291600475|gb|ADE19971.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145] Length = 358 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/244 (42%), Positives = 147/244 (60%), Gaps = 4/244 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A L RMY +W+++ K + L+ + E G T I Sbjct: 109 DDKDVIVEIRGAAGGDEANIFAGDLFRMYQKWSDQNDMKLKVLDENRAEAGGFTLITFSI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ RI ++ R HTS +++ V P +DD IEIE+ D RID Sbjct: 169 LGDKAYSKLKFESGVHRVQRIPVTETKGRVHTSTATVTVMPEIDDDIEIEVKSEDIRIDV 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVRITH +G+VV CQ+ +SQ +NK A +L++KLY+LEL+K+ Sbjct: 229 FRSSGNGGQSVNTTDSAVRITHASSGIVVSCQEGKSQIQNKEIAMRILKSKLYDLELKKK 288 Query: 293 EEIANIGESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EE + G G+ +IR+Y P V D R + TS S V++G L+ + A L Sbjct: 289 EEEES-GYRKLAGSGFRSEKIRTYNY-PQDRVTDHRISY-STSLSPVMEGKLNSIIDALL 345 Query: 352 AIKK 355 A+++ Sbjct: 346 AMEQ 349 >gi|302554164|ref|ZP_07306506.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM 40736] gi|302471782|gb|EFL34875.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM 40736] Length = 358 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 102/251 (40%), Positives = 144/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ I++ Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-IDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILR 277 Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L ++ E A S+ + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 GDL ++A + Sbjct: 337 GDLGAVIQACV 347 >gi|261838950|gb|ACX98715.1| peptide chain release factor RF-1 [Helicobacter pylori 52] Length = 352 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 95/244 (38%), Positives = 147/244 (60%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LI Sbjct: 106 DDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ ++ SD +I+ Sbjct: 166 KGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSLNPSDLKIEV 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RA G GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+A+LYE ++++ Sbjct: 225 FRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEE- 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 +++AN + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + Sbjct: 284 QQLAN-AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVIN 341 Query: 349 ATLA 352 +A Sbjct: 342 PLIA 345 >gi|27904663|ref|NP_777789.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29427417|sp|P59456|RF1_BUCBP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|27904060|gb|AAO26894.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 362 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 109/287 (37%), Positives = 164/287 (57%), Gaps = 13/287 (4%) Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+LL+ L + LQ S +++I+ E+ Q L D + +LE+ + +GG E Sbjct: 67 LLLLDSELHDVAEQELQMLSKKMKKIETEI---QVLLLPCDPNDQQNCFLEIRSASGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + ++ L RMY +++E + +KT + + + G K + I G +YG LK E G HR Sbjct: 124 AAIFSGDLFRMYIKYSEFQNWKTNIIHMTHSLKGGYKDIIVKITGKGSYGKLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDS 248 + R+ +S R HTS + V PVV EIE ++ +D +IDT+R+SGAGGQHVNTTDS Sbjct: 184 VQRVPKTESQGRVHTSTCIVAVIPVVPKK-EIEKVNINDLKIDTFRSSGAGGQHVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIP+G VV+CQ ERSQHKNKA+A ++L +++ EL + + I + +G Sbjct: 243 AVRITHIPSGQVVECQDERSQHKNKAKALSVLVSRIKAAELYNQRKKNAI--QRRDLLGT 300 Query: 309 GRQIRSYVLQPYQM----VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +RS + Y V D R N+ +VLDG LD ++ + Sbjct: 301 G--MRSDRNRTYNFAQNRVTDHRINLVVYCLDEVLDGKLDVLIEPII 345 >gi|39938500|ref|NP_950266.1| protein chain release factor A [Onion yellows phytoplasma OY-M] gi|81565140|sp|Q6YRK0|RF1_ONYPE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|39721609|dbj|BAD04099.1| protein chain release factor A [Onion yellows phytoplasma OY-M] Length = 351 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 101/276 (36%), Positives = 157/276 (56%), Gaps = 15/276 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LL LA +E D +IL E L ++K+ + L D + LE+ +GG E+ Sbjct: 70 LLLLAHQEKD-TILSEKKTTLDQLKILL-------LPQDPFDKKNVVLEIKGASGGNEAN 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLR Y ++AE +K+K E L ++ + G+ S LLI G N Y +LK E GVHR+ Sbjct: 122 LFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGVHRVQ 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS + + V P ++ +E++I D R DT+ +SG GGQ VNTT SAVR Sbjct: 182 RVPATEAQGRIHTSTAVVLVVPEAEE-LELKIDWHDIRTDTFNSSGPGGQSVNTTKSAVR 240 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIP+G+ V CQ+ +SQH+NK +A+ +L+ ++Y L ++E N + K +G G Sbjct: 241 LTHIPSGISVACQEGKSQHENKDKAFTILKTRIYNQMLTAKQEEEN--KHRKNLVGTGER 298 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +IR+Y P + D R + +++G LD Sbjct: 299 SEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLD 333 >gi|314966526|gb|EFT10625.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA2] Length = 379 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 24/270 (8%) Query: 94 RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R +L++ + LL S D DA +E+H+G GG ES +A LLRMY R+AE+ + Sbjct: 101 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 160 Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 L + G ++ + + G P AYG+LK E GVHR+ R+ +S+ R HTS Sbjct: 161 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 220 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS Sbjct: 221 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 279 Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q +NKA+A MLRAK+ E + +R+++ + S++ +R+Y P Sbjct: 280 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 330 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + D R + +L GDL D + A Sbjct: 331 ENRLTDHRIGYKSRKLDQILAGDLGDVLDA 360 >gi|299135937|ref|ZP_07029121.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8] gi|298602061|gb|EFI58215.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8] Length = 356 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 19/351 (5%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R L + DP L + + + + ++ + L+ + +E + +L D + Sbjct: 1 MFDRLDQIEERYEDLGRQLGDPTLVSDQKKFQTVAKQHRDLEPTVDKFREYR-KLRDGVA 59 Query: 72 LLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLL--SGEADSNDAYLEVHAGAGG 127 + L E D + D L + KL ++ + LL D + +E+ AG GG Sbjct: 60 EAKAMLTESDAEMRAMAEDELLTLEPKLATTEEELKVLLLPKDPNDDKNVIVELRAGTGG 119 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ + + RMY R+AE+ K+K E L D + G+K T + +G Y +K E GV Sbjct: 120 DEASLFVAEVFRMYLRFAEQHKWKVEVLSQTDSDVGGLKDVTAIFEGDKVYSQMKYESGV 179 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V P ++ +++++ D RIDT+ +SG GGQ VNTT Sbjct: 180 HRVQRVPATETQGRVHTSAITVAVLPEAEE-VDVKVEAKDLRIDTFCSSGPGGQSVNTTY 238 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE------LQKREEIANIGES 301 SA+RITH+PT VV CQ E+SQ KN+ +A +LRA+LYE+E LQ +E +G Sbjct: 239 SAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRARLYEVEAERVHQLQAKERKQQVGTG 298 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 ++E +IR+Y P + D R + + V++G L + A +A Sbjct: 299 DRSE-----KIRTYNF-PQNRLTDHRIGLTNHQLAMVMEGLLQPTVDALIA 343 >gi|197294284|ref|YP_001798825.1| Protein chain release factor A [Candidatus Phytoplasma australiense] gi|226739118|sp|B1V950|RF1_PHYAS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|171853611|emb|CAM11482.1| Protein chain release factor A [Candidatus Phytoplasma australiense] Length = 354 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 90/235 (38%), Positives = 139/235 (59%), Gaps = 7/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ GG E+ +A LLR Y ++AE +K+K E L +H + G+ S LLI Sbjct: 105 DQKNVILEIKGAVGGNEANLFAADLLRTYMKYAESKKWKVEILNLHPSIKGGLSSVELLI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y +LK E GVHR+ R+ + R HTS + + V P + +EI+I +D R DT Sbjct: 165 SGQNIYSFLKYESGVHRVQRVPATEVQGRIHTSTAIVLVLPEAKE-VEIKIDWNDIRTDT 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR++H+P+G+ V CQ+ +SQH+NK +A+ +L+A++Y L + Sbjct: 224 FNSSGPGGQSVNTTKSAVRLSHLPSGISVACQEGKSQHENKEKAFTLLKARIYNQILNAK 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +E N + K+ +G G +IR+Y P + D R + +++G LD Sbjct: 284 QEAEN--KHRKSLVGTGDRSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLD 335 >gi|319428670|gb|ADV56693.1| peptide chain release factor [Phaseolus vulgaris] Length = 498 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 112/341 (32%), Positives = 187/341 (54%), Gaps = 28/341 (8%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V ++ F K DP + + E + L + LD +S ++ +D C+ + AL + Sbjct: 130 VSKMKF-QVKLADPDVVSDPKEYQKLAQSVAELDEVVSIYRKFKD--CEKHLEEAKALAK 186 Query: 80 DDCSILQETSDNLQRIKLEVEY--KQFESL---------LSGEADSNDAYLEVHAGAGGT 128 D + D ++ I E++ KQ L S D+ + +EV AG GG Sbjct: 187 DGGN----DEDMVEMISFEIDLLSKQLAELEDNLKVLLLPSDPLDARNIMIEVRAGTGGD 242 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ WA L+RMY R++E+ +K + E+ G K+ + IKG Y LK E GVH Sbjct: 243 EAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGFKTYVMEIKGNRVYSKLKYESGVH 302 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +++ + P VD+ +E+ I D + T R+ GAGGQ+VN ++ Sbjct: 303 RVQRVPLTEAQGRVHTSTATVAIMPEVDE-VEVVIDPKDIELTTARSGGAGGQNVNKVET 361 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+ + H PTG+ + C +ER+Q KNK +A+ +LRAKLYE++L++++E ++ K+++G Sbjct: 362 AIDLVHKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEIKLREQQE--SLRNQRKSQVGT 419 Query: 309 G---RQIRSYVLQPYQMVKD-LRTNIEKTSPSDVLDGDLDD 345 G +IR+Y + ++ L+TN E TS LDGD++D Sbjct: 420 GARAEKIRTYNYKDNRVTDHRLKTNYELTS---FLDGDIED 457 >gi|327327350|gb|EGE69126.1| peptide chain release factor 1 [Propionibacterium acnes HL103PA1] Length = 400 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 153/270 (56%), Gaps = 24/270 (8%) Query: 94 RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R +L++ + LL S D DA +E+H+G GG ES +A LLRMY R+AE+ + Sbjct: 122 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 181 Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 L + G ++ + + G P AYG+LK E GVHR+ R+ +S+ R HTS Sbjct: 182 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 241 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS Sbjct: 242 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 300 Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q +NKA+A MLRAK+ E + +R+++ + S++ +R+Y P Sbjct: 301 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNF-P 351 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + D R + +L GDL D + A Sbjct: 352 ENRLTDHRIGYKSRKLDQILAGDLGDVLDA 381 >gi|212640540|ref|YP_002317060.1| peptide chain release factor 1 [Anoxybacillus flavithermus WK1] gi|212562020|gb|ACJ35075.1| Protein chain release factor A [Anoxybacillus flavithermus WK1] Length = 361 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 119/347 (34%), Positives = 185/347 (53%), Gaps = 12/347 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD AV+ R LN DP + + + + +E+ L + +E ++++L D Sbjct: 4 MFDRLEAVEARYEKLNELLMDPEVLNDPKKLRDYSKEQSDLAETVQTYREYKSVREQLAD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 +LE L+ D +++E L+ + ++ K LL + D + +E+ AGG Sbjct: 64 AKAMLEEKLDPDMRDMVKEEISELEEREEQLVEKLKVLLLPKDPNDDKNVIMEIRGAAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +KTE +E H G K +I+G AY LK E G Sbjct: 124 EEAALFAGDLYRMYTRYAESQGWKTEVIEAHPTGLGGYKEIIFMIQGKGAYSKLKFENGA 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P +++ + D R+DT+ +SG GGQ VNTT Sbjct: 184 HRVQRVPETESGGRIHTSTATVACLPEMEEIEIEINEK-DIRVDTFASSGPGGQSVNTTM 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G Sbjct: 243 SAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKYQQ--EARAEYDQTRKQAVG 300 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + VL+G LD+ + A + Sbjct: 301 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLEGKLDEIIDALI 346 >gi|294631400|ref|ZP_06709960.1| peptide chain release factor 1 [Streptomyces sp. e14] gi|292834733|gb|EFF93082.1| peptide chain release factor 1 [Streptomyces sp. e14] Length = 355 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 101/248 (40%), Positives = 144/248 (58%), Gaps = 10/248 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158 Query: 172 IK-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ +++EI+ Sbjct: 159 VKARGQIEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VDVEIN 217 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L Sbjct: 218 PNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRL 277 Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ E A S+ + +IR+Y P + D R + + VLDGDL Sbjct: 278 LAAAQEEAEREAADARRSQVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGDL 336 Query: 344 DDFMKATL 351 ++A + Sbjct: 337 AAVIQACV 344 >gi|295697770|ref|YP_003591008.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912] gi|295413372|gb|ADG07864.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912] Length = 355 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 98/243 (40%), Positives = 144/243 (59%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L RMYTR+AE++ ++ E ++ H + G K + Sbjct: 106 DDKNVIVEIRGAAGGEEASLFAADLFRMYTRYAERQGWRVEMIDSHPTDLGGFKEVVFSV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E G HR+ R+ +S R HTS ++ + +E+EI E D RIDT Sbjct: 166 QGRGAYSRLKFESGAHRVQRVPTTESGGRIHTS-TATVAVMPEVEEVEVEIHEKDLRIDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + ++G GGQ VNTT SAVRITH+PTG+VV CQ E+SQ KN+ +A +LRA+LY E +R Sbjct: 225 FCSTGPGGQSVNTTQSAVRITHLPTGIVVSCQDEKSQLKNREKAMRVLRARLY--EKYRR 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + ++ K+ +G G +IR+Y P V D R + VLDGDLD+ + A Sbjct: 283 EQQEELAQTRKSLVGTGDRSERIRTYNF-PQNRVTDHRIGLTLHRLDAVLDGDLDEIIHA 341 Query: 350 TLA 352 +A Sbjct: 342 LIA 344 >gi|328944392|ref|ZP_08241854.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829] gi|327490976|gb|EGF22753.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829] Length = 354 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 103/240 (42%), Positives = 141/240 (58%), Gaps = 9/240 (3%) Query: 107 LLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 L+ G+ D D +E+ AG GG E+ +A L +MY R+AE + +K E L E G Sbjct: 98 LIPGDPNDEKDTIVEIRAGVGGDEAAIFAGDLYKMYERFAESKNWKVEILSSSPSEVGGF 157 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ + G Y +K E GVHR+ R+ +S R TS +++ V P D+ I+I+I Sbjct: 158 KTIEFKMLGEKVYSVMKYESGVHRVQRVPKTESQGRIQTSTATVAVLPEADE-IDIQIDP 216 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTY ASG GGQ VNTT SAVRITH+PT VVQ Q +RSQ +N+ MLRA+LY Sbjct: 217 TDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLY 276 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 E+EL+K++E G + ++IG G +IR+Y QP V D R T + VL GD Sbjct: 277 EMELEKQQE--EQGAARLSQIGHGNRSEKIRTYN-QPQDRVTDHRIGFNATY-NGVLLGD 332 >gi|169826579|ref|YP_001696737.1| peptide chain release factor 1 [Lysinibacillus sphaericus C3-41] gi|238688208|sp|B1I069|RF1_LYSSC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|168991067|gb|ACA38607.1| Peptide chain release factor 1 (RF-1) [Lysinibacillus sphaericus C3-41] Length = 358 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 109/343 (31%), Positives = 188/343 (54%), Gaps = 12/343 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD AV+ R L DP + + + + +E+ + + +E ++++L D Sbjct: 1 MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKNVKEQLVD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGG 127 +L+ + D +++E + L+ + E+E + L+ + + N + +E+ AGG Sbjct: 61 TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +K + +E G K +I G AY K E G Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P V++ +++EI E D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEVEE-VDVEIHEKDIRVDTFASSGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV Q ERSQ KN+ +A +LRA++ ++ +Q+ ++ I + K+ +G Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQEAQK--EIDATRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G +IR+Y P V D R + +++G LD+ + Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEII 339 >gi|126653461|ref|ZP_01725557.1| peptide chain release factor 1 [Bacillus sp. B14905] gi|126589817|gb|EAZ83950.1| peptide chain release factor 1 [Bacillus sp. B14905] Length = 358 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 109/343 (31%), Positives = 188/343 (54%), Gaps = 12/343 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD AV+ R L DP + + + + +E+ + + +E ++++L D Sbjct: 1 MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDSYREYKNVKEQLVD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGG 127 +L+ + D +++E + L+ + E+E + L+ + + N + +E+ AGG Sbjct: 61 TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +K + +E G K +I G AY K E G Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P V++ +++EI E D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLPEVEE-VDVEIHEKDIRVDTFASSGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV Q ERSQ KN+ +A +LRA++ ++ +Q+ ++ I + K+ +G Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQEAQK--EIDATRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G +IR+Y P V D R + +++G LD+ + Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEII 339 >gi|85057288|ref|YP_456204.1| peptide chain release factor 1 [Aster yellows witches'-broom phytoplasma AYWB] gi|84789393|gb|ABC65125.1| bacterial peptide chain release factor 1 [Aster yellows witches'-broom phytoplasma AYWB] Length = 351 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 100/281 (35%), Positives = 159/281 (56%), Gaps = 25/281 (8%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LL LA +E D +IL + L+++K+ + L D + LE+ AGG E+ Sbjct: 70 LLLLARQEKD-TILSKKKITLEKLKILL-------LPQDPFDKKNVVLEIKGAAGGNEAN 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLR Y ++AE +K+K E L ++ + G+ S LLI G N Y +LK E GVHR+ Sbjct: 122 LFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGVHRVQ 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS + + V+P ++ +E++I D R DT+ +SG GGQ VNTT SAVR Sbjct: 182 RVPTTEAQGRIHTSTAVVLVFPEAEE-LELKIDWHDIRTDTFNSSGPGGQSVNTTKSAVR 240 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY--------ELELQKREEIANIGESSK 303 +TH+P+G+ V CQ+ +SQH+NK +A+ +L+ ++Y E E R+++ GE S+ Sbjct: 241 LTHVPSGISVACQEGKSQHENKDKAFTLLKTRIYNQMLNIKQEEEKTHRKKLVGTGERSE 300 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +IR+Y P + D R + +++G LD Sbjct: 301 -------KIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLD 333 >gi|308233416|ref|ZP_07664153.1| peptide chain release factor 1 [Atopobium vaginae DSM 15829] Length = 300 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 103/240 (42%), Positives = 141/240 (58%), Gaps = 9/240 (3%) Query: 107 LLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 L+ G+ D D +E+ AG GG E+ +A L +MY R+AE + +K E L E G Sbjct: 44 LIPGDPNDEKDTIVEIRAGVGGDEAAIFAGDLYKMYERFAESKNWKVEILSSSPSEVGGF 103 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ + G Y +K E GVHR+ R+ +S R TS +++ V P D+ I+I+I Sbjct: 104 KTIEFKMLGEKVYSVMKYESGVHRVQRVPKTESQGRIQTSTATVAVLPEADE-IDIQIDP 162 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTY ASG GGQ VNTT SAVRITH+PT VVQ Q +RSQ +N+ MLRA+LY Sbjct: 163 TDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLY 222 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 E+EL+K++E G + ++IG G +IR+Y QP V D R T + VL GD Sbjct: 223 EMELEKQQE--EQGAARLSQIGHGNRSEKIRTYN-QPQDRVTDHRIGFNATY-NGVLLGD 278 >gi|300867105|ref|ZP_07111771.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506] gi|300334860|emb|CBN56937.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506] Length = 365 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 114/332 (34%), Positives = 187/332 (56%), Gaps = 21/332 (6%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 +DP+ +Q V +A+ + E + N KE Q+ L +L+ + + + +QE + Sbjct: 31 KDPNEFQRVAKARSSLEE---VVNTFELWKETQENLAGAKQILKESASDPE---MQEMA- 83 Query: 91 NLQRIKLEVEYKQFESLLS------GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 +L+ +LE + ES L D + LE+ AG GG E+ WA L+RMY+R+ Sbjct: 84 SLEVGELEDKSDYLESRLKVLLLPRDPNDDKNIMLEIRAGTGGDEASIWAADLVRMYSRY 143 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A+ + ++ + L GE G K A L I+G + Y LK E GVHR+ R+ ++ R HT Sbjct: 144 AQSQNWQVKMLSESVGESRGFKEAILEIQGDSVYSKLKFEAGVHRVQRVPVTEAGGRVHT 203 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S +++ V P VDD +EI I D + T R+ GAGGQ+VN ++A + H PTG+ + C Sbjct: 204 STATVAVMPEVDD-VEIHIDPKDIEMSTARSGGAGGQNVNKVETAADLFHKPTGIRIFCT 262 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321 +ERSQ +NK +A +LRAKLYE++L RE+ + ++++G G +IR+Y + + Sbjct: 263 EERSQLQNKERAMQILRAKLYEMKL--REQQDEVTSMRRSQVGTGSRSEKIRTYNYKDNR 320 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 D R E S + +L+GD+DD ++A +++ Sbjct: 321 AT-DHRLG-ENFSLNTILEGDIDDVIQACISL 350 >gi|57234023|ref|YP_181923.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195] gi|119361531|sp|Q3Z776|RF1_DEHE1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|57224471|gb|AAW39528.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195] Length = 355 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 115/345 (33%), Positives = 187/345 (54%), Gaps = 14/345 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72 +N +R + + P + + + L +ER L + K I L D L Sbjct: 5 LENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAISKELEDTKNL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAGGTES 130 LE+ +ED +++ +L++ ++ Y Q E L D +E+ AG GG E+ Sbjct: 65 LEIEKDEDMKDMVRGEIASLEKSMADL-YTQMTLELLPKDPNDDKSIIMEIRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L +MYTR+A + +KTE ++I+ IK + G A+ LK E+GVHR+ Sbjct: 124 GLFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P V++ ++I+I+ D R+D + +SGAGGQ+V +A+ Sbjct: 184 QRVPQTEASGRIHTSTATVAVLPQVEE-VDIDINMDDVRVDIFHSSGAGGQNVQKVATAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+THIPTG+VV CQ ERSQ KNK +A+ +LRA+L ELE K +E ES + ++G Sbjct: 243 RLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDE--ERTESRRAQVGQAD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R + + +L+G LD+ + TLA Sbjct: 301 RSEKIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIID-TLA 343 >gi|22297692|ref|NP_680939.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1] gi|32171539|sp|Q8DMG9|RF1_THEEB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|22293869|dbj|BAC07701.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1] Length = 364 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 116/340 (34%), Positives = 186/340 (54%), Gaps = 13/340 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELAL 77 Q + L + DP + N E + + R R L+ ++ E + +L D L + A Sbjct: 15 QTFTELTRRLADPDVAVNPTEFQKVARSRAALEETVNAYHEWQSLNQQLVDARQLHKEAA 74 Query: 78 EEDDCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E + + +E + RI E + L D + LE+ AGAGG E+ WA Sbjct: 75 NEPELRQMAEEEIAHLSHRIAQLEERLKILLLPRDPNDEKNIMLEIRAGAGGDEAGIWAG 134 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L+RMY+R+A+ + ++ + E G K A L IKG Y LK E GVHR+ R+ Sbjct: 135 DLVRMYSRYAKTQGWQVTLVSESLAEMGGFKEAILEIKGDRVYSKLKYESGVHRVQRVPA 194 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +++ R HTS +++ V P VD+ +E+EI D + T R+ GAGGQ+VN ++AV + H Sbjct: 195 TEASGRIHTSTATVAVMPEVDE-VEVEIDPKDIELTTARSGGAGGQNVNKVETAVDLYHK 253 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+ + C +ERSQ KNK +A+ +LRAKLYE++L++++E I ++++G G +I Sbjct: 254 PTGIRIFCTEERSQLKNKERAFQILRAKLYEIKLREQQEA--ITSMRRSQVGTGDRSEKI 311 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+Y + V D R + S S VL+GDL+ ++A ++ Sbjct: 312 RTYNYKD-DRVTDHRLG-QNFSLSSVLEGDLEPIIQACIS 349 >gi|323698089|ref|ZP_08110001.1| peptide chain release factor 1 [Desulfovibrio sp. ND132] gi|323458021|gb|EGB13886.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132] Length = 355 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 94/245 (38%), Positives = 143/245 (58%), Gaps = 11/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ +A L RMYTR+AE +K E + + G K I Sbjct: 105 DEKNIILEIRAGTGGDEAALFAADLYRMYTRYAEINHWKVEEMSANHTGSGGYKEVIASI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ + P ++ ++I++ D R+D Sbjct: 165 SGDKVYSKLKYESGTHRVQRVPATESQGRIHTSAVTVAIMPEAEE-VDIDLRPEDLRVDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-- 290 +R+SG GGQ VNTTDSA+R+THIP+G++V CQ E+SQHKNKA+A +LR++L ++E Sbjct: 224 FRSSGPGGQSVNTTDSAIRVTHIPSGMIVICQDEKSQHKNKAKALKVLRSRLLQIEQDKA 283 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K E+ AN ++++G G +IR+Y P V D R N+ +++G+L D Sbjct: 284 KAEQEAN----RRSQVGSGDRSERIRTYNY-PQGRVSDHRINLTLHQLPQIMEGELQDLT 338 Query: 348 KATLA 352 A ++ Sbjct: 339 DALIS 343 >gi|149280703|ref|ZP_01886814.1| peptide chain release factor 1 [Pedobacter sp. BAL39] gi|149228568|gb|EDM33976.1| peptide chain release factor 1 [Pedobacter sp. BAL39] Length = 380 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 92/240 (38%), Positives = 144/240 (60%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A E+ G GG E+ +A L RMY+R+ E++ +K E +++ +G G K L + Sbjct: 129 DAKNAVFEIRGGTGGDEAALFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKV 188 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ I++ I+ +D + T Sbjct: 189 SGEDVYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAEE-IDLYINPADIDLQT 247 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++ V++TH P+G+VV CQQERSQ N+ A MLR+KLY++ELQK+ Sbjct: 248 SRSGGAGGQNVNKVETKVQLTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKK 307 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +I KT + G +IR+Y P V D R + + S V+DG + + + A Sbjct: 308 N--GDIAARRKTMVSTGDRSAKIRTYNY-PQGRVTDHRIGLTLYNLSGVMDGGVQELIDA 364 >gi|307327906|ref|ZP_07607088.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu 4113] gi|306886424|gb|EFN17428.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu 4113] Length = 359 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 117/337 (34%), Positives = 178/337 (52%), Gaps = 15/337 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP + + EA+ L + L I+ + + D ELA +DD + Sbjct: 15 LEKRLADPAVHADQREARRLNKRYAELTPVIAAYRAWKQAGEDIETARELA--QDDPDFV 72 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E + Q + + + + +D D LEV AG GG ES +A LLRMY R+A Sbjct: 73 EEAKELEQSREGLTDRLRLLLVPRDPSDDKDIILEVKAGEGGEESALFAGDLLRMYLRYA 132 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIK----------GPNAYGWLKGEQGVHRLVRISP 195 E+ +KTE L+ ++ + G K + +K G + LK E GVHR+ R+ Sbjct: 133 ERVGWKTEILDANESDLGGYKDVQVAVKTKGGNGATEPGQGVWARLKYEGGVHRVQRVPA 192 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS + + V P ++ +E+EI +D RID YR+SG GGQ VNTTDSAVRITH+ Sbjct: 193 TESQGRIHTSAAGVLVTPEAEE-VEVEIGPNDLRIDVYRSSGPGGQSVNTTDSAVRITHL 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314 PTG+VV CQ E+SQ +NK QA +LR++L ++ E A+ S+ + +IR+ Sbjct: 252 PTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQVRTVDRSERIRT 311 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y P + D R + + VLDG+L+ ++A + Sbjct: 312 YNY-PENRISDHRVGFKAYNLDQVLDGELEPVIQACV 347 >gi|295707229|ref|YP_003600304.1| peptide chain release factor 1 [Bacillus megaterium DSM 319] gi|294804888|gb|ADF41954.1| peptide chain release factor 1 [Bacillus megaterium DSM 319] Length = 325 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 106/294 (36%), Positives = 164/294 (55%), Gaps = 8/294 (2%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAY 118 K+++++L + +LE L+ D +++E L+ + E VE + + D + Sbjct: 22 KDVKEQLSEAKTMLEDKLDADMRDMVKEEIAELETQQEELVEKLRILLIPKDPNDDKNVI 81 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +EV AGG E+ +A L RMY+R+AE + +KTE +E G K +I G AY Sbjct: 82 MEVRGAAGGDEAALFAANLYRMYSRFAESQGWKTEVMEATTTGVGGYKEIIFMINGKGAY 141 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 +K E G HR+ R+ +S R HTS +++ P ++ +E++I E D R+DT+ +SG Sbjct: 142 SKMKFENGAHRVQRVPETESGGRIHTSTATVACLPEAEE-VEVDIHEKDIRVDTFASSGP 200 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTT SAVR+TH+PT VV CQ E+SQ KNK +A +LRA++Y+ + Q RE A Sbjct: 201 GGQSVNTTMSAVRLTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARVYD-KFQ-REAQAEY 258 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + K +G G +IR+Y P V D R + +L+G LD+ + A Sbjct: 259 DATRKQAVGSGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEIIDA 311 >gi|299469865|emb|CBN76719.1| conserved unknown protein [Ectocarpus siliculosus] Length = 364 Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 98/244 (40%), Positives = 152/244 (62%), Gaps = 12/244 (4%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E DS +A LEV +G+GG E+ +A L MY R+AE + +K E + + G + A+ Sbjct: 108 EGDSKNALLEVRSGSGGDEAAAFAKELFEMYRRFAELKGWKFEGMTCSSIDAGGYREASA 167 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I+G + YG LK E GVHR+ R+ P +S R HTS +S+ V ++ +++++ +SD R Sbjct: 168 SIRGEDVYGSLKFENGVHRVQRV-PSNS-PRLHTSAASVVVMMEAEE-MDLKLEQSDLRF 224 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 + +RASGAGGQHVNTT+SAVRITH+PTG+ Q ERSQH NK +A +LR++++E+ Sbjct: 225 EAFRASGAGGQHVNTTESAVRITHVPTGITASIQDERSQHSNKEKALKVLRSRVFEV--- 281 Query: 291 KREEIANIGESSK-TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345 +R+EIA + + + +G G +IR+Y P + D R N + ++ G+ L D Sbjct: 282 RRDEIARKEAAVRASAVGSGDRSERIRTYNF-PQDRITDHRANYSRHGWEAMMRGEMLGD 340 Query: 346 FMKA 349 F++A Sbjct: 341 FLEA 344 >gi|302542528|ref|ZP_07294870.1| peptide chain release factor 1 [Streptomyces hygroscopicus ATCC 53653] gi|302460146|gb|EFL23239.1| peptide chain release factor 1 [Streptomyces himastatinicus ATCC 53653] Length = 356 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 119/337 (35%), Positives = 179/337 (53%), Gaps = 14/337 (4%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + L + DP + + EAK L + L I ++ + D ELA +DD Sbjct: 13 AALEKRLADPAVHADQREAKRLNKRYAELTPIIDTYRDWKQTGDDIETAQELA--QDDPD 70 Query: 84 ILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 E + L+R +L + + + +D D LEV AG GG ES +A LLRMY Sbjct: 71 FADEVKELELRRAEL-TDRLRLLLVPRDPSDDKDVILEVKAGEGGEESALFAGDLLRMYL 129 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISP 195 R+AE+ +KTE ++ ++ + G K + +K G + LK E GVHR+ R+ Sbjct: 130 RYAERIGWKTEIIDANESDLGGYKDVQVAVKAKGTIEPGQGVWARLKYEGGVHRVQRVPA 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS + + V P ++ +E+EI +D RID YR+SG GGQ VNTTDSAVRITH+ Sbjct: 190 TESQGRIHTSAAGVLVTPEAEE-VEVEIGPNDLRIDVYRSSGPGGQSVNTTDSAVRITHL 248 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314 PTG+VV CQ E+SQ +NK QA +LR++L ++ E A+ S+ + +IR+ Sbjct: 249 PTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQVRTVDRSERIRT 308 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y P + D R + + VLDG+L ++A + Sbjct: 309 YNF-PENRISDHRVGFKAYNLDQVLDGELAPVIQACV 344 >gi|281358665|ref|ZP_06245143.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548] gi|281314895|gb|EFA98930.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548] Length = 362 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 113/348 (32%), Positives = 183/348 (52%), Gaps = 29/348 (8%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD------RLCDNLILL-- 73 R + L DP ++ E + + +E + L+ + ++ D L DN +L Sbjct: 16 RFAELEAALADPAIYARGAECRRVSQEHRKLE---TLFRKFDDWRKALAELADNREMLTA 72 Query: 74 --ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVHAGAGGT 128 + L E + + + + Q+++ +++ SLL D NDA + + AGG Sbjct: 73 ETDAELRELIAADIADLEERAQKLEADIQI----SLLP--PDPNDAKNIIVGIKPAAGGD 126 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L R Y ++AEK+ ++ E L+ D E GIK + + G Y +K E GVH Sbjct: 127 EAALFAGELFRAYMKFAEKKGWRIEVLDQTDTELGGIKDVSFSLSGDEVYSLMKYESGVH 186 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P ++ +E++I D R D +R+SG GGQ VNTTDS Sbjct: 187 RVQRVPATEAGGRIHTSTVTVAVMPEAEE-VELDIRPEDLRFDVFRSSGPGGQCVNTTDS 245 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+THIPTG+ V QQE+SQH+NK A +L A+L LE +++EE ++++G Sbjct: 246 AVRVTHIPTGIAVASQQEKSQHRNKEIALRILYARL--LEHKQQEEADKQAADKRSQVGT 303 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G +IR+Y P V D R N+ +++G+LD + L I Sbjct: 304 GDRSERIRTYNF-PQNRVTDHRFNVNTFDLPKLMEGELDLILDQILMI 350 >gi|119961991|ref|YP_948327.1| peptide chain release factor 1 [Arthrobacter aurescens TC1] gi|119948850|gb|ABM07761.1| peptide chain release factor 1 [Arthrobacter aurescens TC1] Length = 359 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 99/248 (39%), Positives = 145/248 (58%), Gaps = 12/248 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + LEV G GG E+ +A LLRMY R+AE R +KTE + + + G K + I Sbjct: 102 DARNVILEVKGGEGGDEAALFAGDLLRMYMRYAESRGWKTEMISATESDLGGYKDVAVAI 161 Query: 173 KG------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG + LK E GVHR+ R+ +S R HTS + + V P VD+ E+EI+++ Sbjct: 162 KGNSNDPAQGVFARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQN 221 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ +LRA+L Sbjct: 222 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARL-- 279 Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L Q+ + A E K++I +IR+Y P + D RT + + V++GDL Sbjct: 280 LAHQQEQIDAANSEQRKSQIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVMNGDL 338 Query: 344 DDFMKATL 351 + +++ + Sbjct: 339 EPVIQSAI 346 >gi|159474546|ref|XP_001695386.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii] gi|158275869|gb|EDP01644.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii] Length = 336 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 108/263 (41%), Positives = 153/263 (58%), Gaps = 19/263 (7%) Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 QE +D +R+ L + + + S A LEV AGAGG E+ +A+ LL MY R A Sbjct: 61 QEAADLTRRLLLALVPPEPSA-------SRPALLEVRAGAGGAEAALFASELLAMYRRLA 113 Query: 146 EKRKFKT-----EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 + R + E LE+ + E G++ AT+ G YG L GE GVHR+ R+ ++ Sbjct: 114 QARTCASRGWTWEVLELGNSEHGGVRHATVAGAGEGVYGVLSGESGVHRVQRVPVTEAGG 173 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +++ V P D+ +++ + E D R++T RASGAGGQHVN TDSAVRITH+PTG+V Sbjct: 174 RLHTSTAAVVVLPQADE-VDVRLREEDLRVETMRASGAGGQHVNVTDSAVRITHLPTGLV 232 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V CQ ERSQH N+A A +LR++LY+LE Q+R A GE + G ++R+Y Sbjct: 233 VSCQNERSQHLNRAAALKVLRSRLYDLEAQRRARQA--GEQRSALVASGDRSERVRTYNF 290 Query: 318 QPYQMVKDLRTNIEKTSPSDVLD 340 P V D R ++ VL+ Sbjct: 291 -PQGRVTDHRIHLTVHDLGSVLE 312 >gi|157133587|ref|XP_001656262.1| mitochondrial peptide chain release factor [Aedes aegypti] gi|108870765|gb|EAT34990.1| mitochondrial peptide chain release factor [Aedes aegypti] Length = 422 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 104/259 (40%), Positives = 159/259 (61%), Gaps = 13/259 (5%) Query: 66 LCDNL-ILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLE 120 + DNL L E++ E+D+ +++E + I +++ + +LS E D N LE Sbjct: 111 IMDNLNSLQEMSTEKDEDMLQLMREEKEAYTNILRKLDGEIMNGILSMDDEEDYNTLILE 170 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 V AG GG E+ ++ L MY + + + ++TE +E D E GI+ A++++ G +AY + Sbjct: 171 VAAGVGGQEAMLFSRELFDMYCGFIDYKGWETEVIETEDTELGGIRHASIVVHGRDAYRY 230 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHR+ R+ + ++R HTS +++ V P D+ EIE+ + D +I+T RASGAGG Sbjct: 231 LKFEAGVHRVQRVPTTEKSARIHTSTATVSVIPRPDE-FEIELKDKDLKIETKRASGAGG 289 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK A L AKL + EL+ + N + Sbjct: 290 QHVNTTDSAVRIVHLPTGMAVECQTERSQVKNKEIAKQKLLAKLTQQELESK---FNATQ 346 Query: 301 S-SKTEIGWG---RQIRSY 315 S K+++G +IR+Y Sbjct: 347 SMKKSQVGSSLRNEKIRTY 365 >gi|118581059|ref|YP_902309.1| peptide chain release factor 1 [Pelobacter propionicus DSM 2379] gi|166223584|sp|A1ASD1|RF1_PELPD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118503769|gb|ABL00252.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter propionicus DSM 2379] Length = 354 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 91/243 (37%), Positives = 143/243 (58%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D LE+ AG GG ES +A L RMY+R+A+ ++K E + + E G K + Sbjct: 103 DDKSVILEIRAGTGGDESALFAGDLFRMYSRFADVNRWKVETISASESERGGFKEIIASV 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + LK E G HR+ R+ ++ R HTS ++ + +D ++I+I+ +D +ID Sbjct: 163 EGEGVFAKLKYESGTHRVQRVPETEAQGRIHTSACTVAIMAEAED-VDIDINPTDLKIDV 221 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ+ERSQ KN+A+A +L+ ++ ++ ++ Sbjct: 222 YRSSGAGGQHVNTTDSAVRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRI--MDSIQQ 279 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ A + K ++G G +IR+Y P + D R + ++ GD+ + + A Sbjct: 280 EQNARMAADRKQQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIAEIVDA 338 Query: 350 TLA 352 A Sbjct: 339 LRA 341 >gi|328870409|gb|EGG18783.1| peptide chain release factor 1 [Dictyostelium fasciculatum] Length = 530 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 103/252 (40%), Positives = 151/252 (59%), Gaps = 17/252 (6%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S + D +A +E+ AG GG+E+Q +A +L MY +A+ +K E LEI + G K Sbjct: 268 LPSDKDDEGNAIMEIRAGTGGSEAQLFALEMLGMYEGYAQTMGWKFEVLEIGWTDAVGNK 327 Query: 167 S---ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 + A+ I G +G+LK E GVHR+ RI ++ R HTS ++ + P + ++I+I Sbjct: 328 ACRDASASISGRGVFGFLKNESGVHRVQRIPETETMGRVHTSTVTVAILPEPKE-VDIKI 386 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +S+ RID YR+SG GGQ VNTTDSAVRITH+PTG VV Q ERSQ N+A+A +LRA+ Sbjct: 387 RDSELRIDVYRSSGNGGQSVNTTDSAVRITHLPTGTVVAMQDERSQLMNRAKAMKILRAR 446 Query: 284 LYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LYE E + + IG++S++E +IR+Y P V D R NI + Sbjct: 447 LYEAERSRLHNERSSHRSSQIGDASRSE-----KIRTYNF-PQDRVTDHRVNISTNNIES 500 Query: 338 VLDGD-LDDFMK 348 V+ G+ L+D ++ Sbjct: 501 VMAGESLNDLIE 512 >gi|302558381|ref|ZP_07310723.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000] gi|302475999|gb|EFL39092.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000] Length = 358 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 101/251 (40%), Positives = 144/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVILEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + LK E GVHR+ R+ +S R HTS + + V P ++ +++ Sbjct: 159 VKTKGGQGATEPGQGVWARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTPEAEE-VDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI+ +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILR 277 Query: 282 AKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L ++ E A S+ + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEEAEREAADARRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 GDL ++A + Sbjct: 337 GDLAAVIQACV 347 >gi|320102129|ref|YP_004177720.1| peptide chain release factor 1 (bRF-1) [Isosphaera pallida ATCC 43644] gi|319749411|gb|ADV61171.1| bacterial peptide chain release factor 1 (bRF-1) [Isosphaera pallida ATCC 43644] Length = 364 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 113/334 (33%), Positives = 182/334 (54%), Gaps = 16/334 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN-AISFIK--EIQDRLCDNLILLELAL 77 +R LN + P L + LMRER L A+ + + E+ R + ++E Sbjct: 10 RRYEELNRELASPDLVNDPGRLAALMRERSALAKLAVPYARYLELTRRRAEVQQVIETES 69 Query: 78 EEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDW 133 + + Q D L + + E EY ++L+ +A +D +E+ AG GG E+ + Sbjct: 70 DPEMKEYAQAEFDQLAQAEAESAEY--LKTLIYEQATGSDHAGVIVEIRAGTGGDEAALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L MY R+ E++ ++ E LEI E G + A+ ++G AY L+ E G HR+ R+ Sbjct: 128 ARDLYEMYRRFVERQGWRFEPLEIAPTELGGFREASFGVRGEGAYRHLQFESGGHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P ++ +EIE+ + D +ID RA G GGQH N T+S VRIT Sbjct: 188 PVTETQGRIHTSAATVAVLPEPEE-VEIELRDEDLQIDVMRAGGPGGQHQNKTESGVRIT 246 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+P+G+VV C+ ERSQHKNKA+A +LR++LY E Q+ + ++ ++ IG G + Sbjct: 247 HLPSGIVVNCRDERSQHKNKAKALRILRSRLY--EAQRNAAQSQRSQTRRSLIGSGDRSQ 304 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +IR+Y P V D R N+ ++ G+L+ Sbjct: 305 RIRTYNF-PQNRVTDHRINLTLHQLDRIVAGELE 337 >gi|120434841|ref|YP_860527.1| peptide chain release factor 1 [Gramella forsetii KT0803] gi|166223562|sp|A0LYL5|RF1_GRAFK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|117576991|emb|CAL65460.1| peptide chain release factor 1 [Gramella forsetii KT0803] Length = 358 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 89/232 (38%), Positives = 138/232 (59%), Gaps = 3/232 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +A L RMYT++ E R + ++ +G G K + Sbjct: 106 DGKNIVMEIRAGTGGDEASIFAGDLYRMYTKYVEGRGWSHNIVDFSEGTSGGFKEMIFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG +K E GVHR+ R+ ++ R HTS +++ V P ++ ++EI + RID Sbjct: 166 SGDDVYGTMKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVEIDPKEVRIDY 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SG GGQ VNTT SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LYE+EL K+ Sbjct: 225 FCSSGPGGQSVNTTYSAVRLTHEPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKK 284 Query: 293 EEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 E +S G +IR+Y + V D R N+ S++++GD+ Sbjct: 285 MEADAAKRNSMVSSGDRSAKIRTYNYAQSR-VTDHRINLTLYDLSNIINGDI 335 >gi|157134367|ref|XP_001663262.1| mitochondrial peptide chain release factor [Aedes aegypti] gi|108870516|gb|EAT34741.1| mitochondrial peptide chain release factor [Aedes aegypti] Length = 422 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 107/260 (41%), Positives = 154/260 (59%), Gaps = 15/260 (5%) Query: 66 LCDNLILLELALEEDDCSILQ------ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + DNL L+ E D +LQ E N+ R KL+ E + E D N L Sbjct: 111 IMDNLNSLQEMSAEKDEDMLQLMREEKEAYTNILR-KLDGEIMNGILSMDDEEDYNTLIL 169 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 EV AG GG E+ ++ L MY + + + ++TE +E D E GI+ A++++ G +AY Sbjct: 170 EVAAGVGGQEAMLFSRELFDMYCGFIDYKGWETEVIETEDTELGGIRHASIVVHGRDAYR 229 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E GVHR+ R+ + ++R HTS +++ V P D+ EIE+ + D +I+T RASGAG Sbjct: 230 YLKFEAGVHRVQRVPTTEKSARIHTSTATVSVIPRPDE-FEIELKDKDLKIETKRASGAG 288 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK A L AKL + EL+ + N Sbjct: 289 GQHVNTTDSAVRIVHLPTGMAVECQTERSQVKNKEIAKQKLLAKLTQQELESK---FNAT 345 Query: 300 ES-SKTEIGWG---RQIRSY 315 +S K+++G +IR+Y Sbjct: 346 QSMKKSQVGSSLRNEKIRTY 365 >gi|158300562|ref|XP_320450.4| AGAP012078-PA [Anopheles gambiae str. PEST] gi|157013219|gb|EAA00316.4| AGAP012078-PA [Anopheles gambiae str. PEST] Length = 760 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 100/252 (39%), Positives = 148/252 (58%), Gaps = 16/252 (6%) Query: 74 ELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTE 129 EL ++DD +L+E + I ++ + +LS E D +EV AG GG E Sbjct: 459 ELKDDKDDEMVQLLKEEREAYGSILFRLDSEILNGILSMDDEEDYGSLIMEVTAGVGGQE 518 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L MY + E + ++ E L+ + + G + AT +I GP+AY +LK E GVHR Sbjct: 519 AMLFARELFDMYCGYVEYKGWEVEMLQTENTDIGGTRHATTVISGPDAYRYLKHEGGVHR 578 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI + + R HTS ++ + P DD ++E+ E D +I+T RASGAGGQHVNTTDSA Sbjct: 579 VQRIPATEKSGRIHTSTVTVSIIPRPDD-FQVELKEKDLKIETKRASGAGGQHVNTTDSA 637 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR------EEIANIGESSK 303 VRI H+PTG+ V+CQ ERSQ KN+ A L AKL ++EL+ R + + +G+S + Sbjct: 638 VRIVHLPTGIAVECQTERSQQKNREIAKQKLTAKLMQIELEARFSSTQALKKSQVGQSLR 697 Query: 304 TEIGWGRQIRSY 315 E +IR+Y Sbjct: 698 NE-----KIRTY 704 >gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC 13032] gi|62390088|ref|YP_225490.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC 13032] gi|145295339|ref|YP_001138160.1| peptide chain release factor 1 [Corynebacterium glutamicum R] gi|24418635|sp|Q8NR57|RF1_CORGL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223553|sp|A4QDG1|RF1_CORGB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21323967|dbj|BAB98593.1| Protein chain release factor A [Corynebacterium glutamicum ATCC 13032] gi|41325424|emb|CAF19904.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Corynebacterium glutamicum ATCC 13032] gi|140845259|dbj|BAF54258.1| hypothetical protein [Corynebacterium glutamicum R] Length = 358 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 101/249 (40%), Positives = 148/249 (59%), Gaps = 7/249 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGAGG E+ +A LLRMY ++A+K F E L+ + + G+K TL I Sbjct: 103 DGEDIVMEIKAGAGGEEAALFAGDLLRMYQKFADKHGFVVEVLDSAESDLGGVKDITLSI 162 Query: 173 KG--PN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 + P+ A+ K E GVHR+ R+ +S R TS + + VYP D+ +EI E D Sbjct: 163 RSRQPSRDGAWSQFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVENVEIDEKD 222 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R+D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ+ERSQ +N+A+A +L A+L + Sbjct: 223 IRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNRARAMQVLAARLQAM 282 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + ++ A G +++ + +IR+Y P + D R + + VLDG+LDD Sbjct: 283 KEEEAAAEAATGRAAQIRTMDRSERIRTYNW-PENRISDHRIGFKANNLDSVLDGELDDL 341 Query: 347 MKATLAIKK 355 A A ++ Sbjct: 342 FTALQAAER 350 >gi|167842463|gb|ACA03159.1| RF1 [Dictyostelium fasciculatum] Length = 515 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 103/255 (40%), Positives = 152/255 (59%), Gaps = 17/255 (6%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S + D +A +E+ AG GG+E+Q +A +L MY +A+ +K E LEI + G K Sbjct: 253 LPSDKDDEGNAIMEIRAGTGGSEAQLFALEMLGMYEGYAQTMGWKFEVLEIGWTDAVGNK 312 Query: 167 S---ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 + A+ I G +G+LK E GVHR+ RI ++ R HTS ++ + P + ++I+I Sbjct: 313 ACRDASASISGRGVFGFLKNESGVHRVQRIPETETMGRVHTSTVTVAILPEPKE-VDIKI 371 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +S+ RID YR+SG GGQ VNTTDSAVRITH+PTG VV Q ERSQ N+A+A +LRA+ Sbjct: 372 RDSELRIDVYRSSGNGGQSVNTTDSAVRITHLPTGTVVAMQDERSQLMNRAKAMKILRAR 431 Query: 284 LYELELQK------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LYE E + + IG++S++E +IR+Y P V D R NI + Sbjct: 432 LYEAERSRLHNERSSHRSSQIGDASRSE-----KIRTYNF-PQDRVTDHRVNISTNNIES 485 Query: 338 VLDGD-LDDFMKATL 351 V+ G+ L+D ++ + Sbjct: 486 VMAGESLNDLIEEII 500 >gi|302529800|ref|ZP_07282142.1| peptide chain release factor 1 [Streptomyces sp. AA4] gi|302438695|gb|EFL10511.1| peptide chain release factor 1 [Streptomyces sp. AA4] Length = 356 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 118/337 (35%), Positives = 184/337 (54%), Gaps = 12/337 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP + + A+ L R L + ++E+ D+ D+L + L +D + Sbjct: 16 LEQELADPAVHADQARARKLGRRYAELSPVVRAVREL-DQARDDLSAAK-ELSAEDATFA 73 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E + +I ++E K E LL + D +D +E+ +G GG ES +A LLRMY R+ Sbjct: 74 AEADELTAKIP-QLEAKLTELLLPRDPYDGSDVVMEIKSGEGGEESALFAGDLLRMYLRY 132 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRLVRISPYDSN 199 AE+ +K E L+ + + G K TL +K A + LK E GVHR+ R+ +S Sbjct: 133 AERHNWKAEVLDSTESDLGGYKDVTLSLKSKTADVEGVWARLKFEGGVHRVQRVPATESQ 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS S + +Y + +E+EI +D RID +R+SG GGQ VNTTDSAVRITH+PTG+ Sbjct: 193 GRIHTSASGVLIY-PEPEEVEVEIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGI 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318 VV CQ E+SQ +N+A+A +L+A+L + ++ A+ S+ + ++R+Y Sbjct: 252 VVSCQNEKSQIQNRARALQVLQARLQAIAEEEAAAKASDARRSQVRTVDRSERVRTYNF- 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P + D R N + + VLDG+LD + A A + Sbjct: 311 PENRISDHRVNYKAYNLDQVLDGELDGVLDALAAADR 347 >gi|239944287|ref|ZP_04696224.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL 15998] gi|239990742|ref|ZP_04711406.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL 11379] gi|291447755|ref|ZP_06587145.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL 15998] gi|291350702|gb|EFE77606.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL 15998] Length = 358 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 99/251 (39%), Positives = 145/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVLLEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + +K E GVHR+ R+ +S R HTS + + V P ++ +++ Sbjct: 159 VKTKGGNGATEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L + +E +++ S + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEAAEQEASDVRRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 G+LD ++A + Sbjct: 337 GELDAVIQACV 347 >gi|56421913|ref|YP_149231.1| peptide chain release factor 1 [Geobacillus kaustophilus HTA426] gi|261420783|ref|YP_003254465.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61] gi|297531578|ref|YP_003672853.1| peptide chain release factor 1 [Geobacillus sp. C56-T3] gi|319768453|ref|YP_004133954.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52] gi|61214572|sp|Q5KUH3|RF1_GEOKA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56381755|dbj|BAD77663.1| peptide chain release factor 1 (RF-1) in translation [Geobacillus kaustophilus HTA426] gi|261377240|gb|ACX79983.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61] gi|297254830|gb|ADI28276.1| peptide chain release factor 1 [Geobacillus sp. C56-T3] gi|317113319|gb|ADU95811.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52] Length = 358 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 125/347 (36%), Positives = 191/347 (55%), Gaps = 12/347 (3%) Query: 13 LFDWDNAV-QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD AV QR LN DP + + + + +E+ L+ + +E ++++L + Sbjct: 1 MFDRLEAVEQRYEKLNELLMDPDVINDPKKLRDYSKEQADLEETVQTYREYKSVREQLAE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 +LE LE + +++E L+ + + K LL + D + +E+ A AGG Sbjct: 61 AKAMLEEKLEPELREMVKEEIGELEEREEALVEKLKVLLLPKDPNDEKNVIMEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +KTE +E G K +I G AY LK E G Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMINGKGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P +++ IE+EI+E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLPEMEE-IEVEINEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQ--EARAEYDQTRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + VLDG LD+ ++A + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGHLDEIIEALI 343 >gi|254778803|ref|YP_003056908.1| peptide chain release factor 1 [Helicobacter pylori B38] gi|254000714|emb|CAX28630.1| Peptide chain release factor 1 (RF-1) [Helicobacter pylori B38] Length = 352 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 113/299 (37%), Positives = 171/299 (57%), Gaps = 19/299 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ LE KQ L+ + D + Sbjct: 61 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 110 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 111 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 170 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y K E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 171 YSRFKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 229 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PT + V Q E+SQHKNK +A +L+ +LYE ++++ +++AN Sbjct: 230 HGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKVRLYEKQIEE-QQLAN 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMKATLA 352 + K ++G G +IR+Y P + + R N+ S ++ L G+LD+ + +A Sbjct: 289 -AKDRKEQVGSGDRSERIRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIA 345 >gi|330719389|ref|ZP_08313989.1| peptide chain release factor 1 [Leuconostoc fallax KCTC 3537] Length = 359 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 109/301 (36%), Positives = 161/301 (53%), Gaps = 17/301 (5%) Query: 57 SFIKEIQDR--LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 S +++IQD L D+ + ELA DD L+ Q+ LE + K L D Sbjct: 56 SVLQDIQDAEDLLDDTDMAELA--RDDLKTLKP-----QKASLEEQLKVL-MLPQDPNDD 107 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 + +E+ AGG ES +A LL MY ++AEK+ + ++ E G K ++I G Sbjct: 108 KNIIMEIRGAAGGDESSLFAADLLDMYRKYAEKQNWHINLIDESATEVGGYKEVVVMITG 167 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTY 233 N Y LK E G HR+ R+ ++ R HTS +++ V P +D + I D R D Y Sbjct: 168 NNVYSKLKFESGAHRVQRVPVTETQGRVHTSTATVGVMPEFEDVDATDLIDPKDVREDVY 227 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQHVN T SA+R+TH PTG+ V Q ERSQ +N+A+AW +L A++Y+ Q+ E Sbjct: 228 RSSGAGGQHVNKTSSAIRLTHEPTGITVAMQDERSQQQNRAKAWKILNARVYDYFAQQNE 287 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 A + KT +G G +IR+Y P V D R + V++G+L+D + A Sbjct: 288 --AEYAQKRKTAVGTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELEDIIDAL 344 Query: 351 L 351 + Sbjct: 345 I 345 >gi|319948468|ref|ZP_08022604.1| peptide chain release factor 1 [Dietzia cinnamea P4] gi|319437888|gb|EFV92872.1| peptide chain release factor 1 [Dietzia cinnamea P4] Length = 361 Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 125/343 (36%), Positives = 180/343 (52%), Gaps = 11/343 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ + L + DP L ++ A+ + + L + + + D ELA Sbjct: 13 DDVLSEYGGLEAQLSDPTLHEDAAAARRVGKRFAELTPIVQCHRALVSTRDDAAAARELA 72 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135 DD S +E +D L E+E + + L + D++D +E+ +G GG ES +A Sbjct: 73 --GDDPSFAEE-ADRLDAEAAELEARLADLLAPRDPHDADDVVMEIKSGEGGEESALFAA 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG--PNAYG-W--LKGEQGVHRL 190 L RMYTR+AEK + E L + + + G K A+ I+ P+ G W LK E GVHR+ Sbjct: 130 DLARMYTRYAEKHGWIVEVLGVTESDLGGYKDASFSIRSRQPSRDGVWSRLKFEGGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + V+P +D +EI ESD RID YR+SG GGQ VNTTDSAV Sbjct: 190 QRVPVTESQGRVHTSAAGVLVFPEPEDVGPVEIDESDLRIDVYRSSGKGGQGVNTTDSAV 249 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG VV CQ ERSQ +NK +A +L A+L + A G +S+ + Sbjct: 250 RITHLPTGTVVTCQNERSQLQNKQRALQVLAARLQAAAEEAAGAEAAEGRASQVRTVDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R + + VLDGDLD + A A Sbjct: 310 ERIRTYNY-PENRIADHRVGFKAHNLDAVLDGDLDAVLDALAA 351 >gi|291397162|ref|XP_002714988.1| PREDICTED: mitochondrial translational release factor 1-like [Oryctolagus cuniculus] Length = 380 Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 102/246 (41%), Positives = 142/246 (57%), Gaps = 9/246 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLVLEVTAGIGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + ++ D Sbjct: 181 SASIGGSEAYKLMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTE-INLVVNPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KN+ A L AKLY + Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNREMAMKKLCAKLYSMH 299 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343 L+ EE + + K ++G GR +IR+Y P V D R N + GD L Sbjct: 300 LE--EETSKRYNARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSVHDLEAFMKGDYQL 356 Query: 344 DDFMKA 349 D+ +++ Sbjct: 357 DEMIQS 362 >gi|169628533|ref|YP_001702182.1| peptide chain release factor 1 [Mycobacterium abscessus ATCC 19977] gi|238688924|sp|B1MLV1|RF1_MYCA9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169240500|emb|CAM61528.1| Probable peptide chain release factor 1 (RF-1) [Mycobacterium abscessus] Length = 356 Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 117/277 (42%), Positives = 158/277 (57%), Gaps = 19/277 (6%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGAGGTES 130 L DD S E ++ LE + E+ LS D +D LEV +G GG ES Sbjct: 66 LSADDPSFADEVTE------LESSIAELETQLSDMLAPRDPHDGDDILLEVKSGEGGEES 119 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQ 185 +A L RMY R+AE+ +K L+ + + G K ATL I KG +A G W LK E Sbjct: 120 ALFAADLARMYIRYAERHGWKVTVLDETESDLGGYKDATLAIASKGDSADGVWSRLKFEG 179 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + VYP ++ EI+I ESD RID YR+SG GGQ VNT Sbjct: 180 GVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEEIQIDESDLRIDVYRSSGKGGQGVNT 239 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV CQ ERSQ +NKA+A +L A+L L ++ + A+ G +S+ Sbjct: 240 TDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAQADASAGRASQIR 299 Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 + +IR+Y P + D R + + VLDG Sbjct: 300 TVDRSERIRTYNF-PENRITDHRVGFKAHNLDQVLDG 335 >gi|321310997|ref|YP_004193326.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford 1] gi|319802841|emb|CBY93487.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford 1] Length = 364 Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 98/243 (40%), Positives = 143/243 (58%), Gaps = 9/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ + AGG ES + L Y R+A+ +K L I + G+ + Sbjct: 111 DEKNVIVEMRSAAGGDESTIFVENLFDTYKRYADMNNWKLTILNIQENS-IGMHFLAFSL 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N + +K E GVHR+ R+ +S R HTS ++ V P DD IEI I SD RID Sbjct: 170 SGKNVFSKMKFESGVHRVQRVPATESKGRVHTSTITVSVMPEQDD-IEINIDPSDLRIDV 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN T+S+VRITH+PTG+VV CQQE+SQ +N+A A MLR+KL+E E +K+ Sbjct: 229 YRASGAGGQHVNKTESSVRITHLPTGIVVACQQEKSQIQNRAFAMKMLRSKLWEHEQEKQ 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMK 348 + I E+ + +IG G +IR+Y P + D R ++ ++++ GDL + + Sbjct: 289 SK--EIAETVRKQIGRGFRCEKIRTYNY-PQNRITDHRVSLTLNKLNEIMIGGDLTEIHE 345 Query: 349 ATL 351 + L Sbjct: 346 SLL 348 >gi|189218443|ref|YP_001939084.1| protein chain release factor A [Methylacidiphilum infernorum V4] gi|189185301|gb|ACD82486.1| Protein chain release factor A [Methylacidiphilum infernorum V4] Length = 377 Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 109/308 (35%), Positives = 171/308 (55%), Gaps = 19/308 (6%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L E + ++NA S ++ + D I ELA +E + S+ +Q + + + Sbjct: 49 LYGELKQIENAKSSVESLAKETVDPEIQ-ELAQQE-----ITRLSNKIQELTMAI----L 98 Query: 105 ESLLSGEAD--SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 SL E + S + +E+ AG GG E+ +A L RMY+++AEK+ +K E L + E Sbjct: 99 GSLFPPEENKSSKNVIIEIRAGTGGEEAALFAADLYRMYSKYAEKKGWKQELLHFNPSEL 158 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G+K ++G A+ +K E GVHR+ R+ +S R HTS +++ V + + +E++ Sbjct: 159 GGLKEVIFTVQGKEAFRKMKFESGVHRVQRVPATESQGRIHTSTATVAVL-LETEEVELD 217 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I D RI+ RASG GGQ VNTTDSAV++ HIP+G++V+CQ ERSQ KNK +A +L+A Sbjct: 218 IKAEDLRIEVCRASGPGGQGVNTTDSAVQVFHIPSGIMVRCQDERSQIKNKEKALKILKA 277 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 +L L ++ EE + K+ IG G +IR+Y P V D R I + + Sbjct: 278 RL--LARKQEEEAQKRAQERKSMIGSGERTEKIRTYNF-PQGRVTDHRIPITLYNLQSFM 334 Query: 340 DGDLDDFM 347 DGD+D + Sbjct: 335 DGDIDPIV 342 >gi|182435969|ref|YP_001823688.1| peptide chain release factor 1 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776593|ref|ZP_08235858.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1] gi|238689014|sp|B1W0B6|RF1_STRGG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|178464485|dbj|BAG19005.1| putative peptide chain release factor 1 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656926|gb|EGE41772.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1] Length = 358 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 99/251 (39%), Positives = 145/251 (57%), Gaps = 13/251 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D D LE+ AGAGG ES +A LLRMY R+AE+ +KTE ++ + E G K + Sbjct: 99 SDDKDVLLEIKAGAGGDESALFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVA 158 Query: 172 IK----------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 +K G + +K E GVHR+ R+ +S R HTS + + V P ++ +++ Sbjct: 159 VKTKGGNGATEPGQGVWARMKYEGGVHRVQRVPSTESQGRIHTSAAGVLVTPEAEE-VDV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI +D RID YR+SG GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR Sbjct: 218 EIHANDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277 Query: 282 AKLY-ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 ++L + +E +++ S + +IR+Y P + D R + + VLD Sbjct: 278 SRLLAAAQEAAEQEASDVRRSQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLD 336 Query: 341 GDLDDFMKATL 351 G+LD ++A + Sbjct: 337 GELDAVIQACV 347 >gi|162457313|ref|YP_001619680.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56'] gi|229470353|sp|A9G9L1|RF1_SORC5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|161167895|emb|CAN99200.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56'] Length = 364 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 92/240 (38%), Positives = 144/240 (60%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +E+ +G GG E+ +A L RM R+AE +++K E L + + G K LI Sbjct: 105 DTRNTVIEIRSGEGGEEAALFAADLFRMLCRYAETKRWKVEVLNLSEASAGGYKEVAALI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y L+ E GVHR+ R+ ++ R HTS +++ V P D+ +++ I E D I Sbjct: 165 TGQDVYSHLRYEGGVHRVQRVPSTETQGRIHTSTATVAVLPEADE-VDVHIDEKDLEISI 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + G GGQ VNTT+SAV+I H+PTG++V+CQ ERSQ KNKA+A +LR++L ELE Q+R Sbjct: 224 AASGGPGGQGVNTTNSAVQIKHLPTGMIVKCQDERSQLKNKAKAMKVLRSRLLELE-QRR 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E A E +T +G G +++R+Y P V D R + +++GDL++ + A Sbjct: 283 QEEAQSAE-RRTMVGTGERAQKVRTYNF-PQNRVTDHRIGLTLHKLDKIIEGDLEELIGA 340 >gi|73946154|ref|XP_541157.2| PREDICTED: similar to mitochondrial translational release factor 1-like [Canis familiaris] Length = 280 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 100/224 (44%), Positives = 133/224 (59%), Gaps = 7/224 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 21 SEETDKNDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHA 80 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 81 SASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 139 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RI T RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ A LRAKLY + Sbjct: 140 RIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMY 199 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329 L+ EE + + K ++G GR +IR+Y P V D R N Sbjct: 200 LE--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRIN 240 >gi|32475815|ref|NP_868809.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1] gi|81659907|sp|Q7ULT3|RF1_RHOBA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|32446358|emb|CAD76186.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1] gi|327538345|gb|EGF25018.1| peptide chain release factor 1 [Rhodopirellula baltica WH47] Length = 360 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 119/340 (35%), Positives = 185/340 (54%), Gaps = 17/340 (5%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQH-----LDNAISFIKEIQDRLCDNLILLELA 76 R L DP + + A+M R+H L N K + D + + ++ A Sbjct: 15 RFEKLENDMSDPEVLSD--GARMSATAREHGGLNRLANQYRTFKRLTDEIHQCVAMVADA 72 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA--YLEVHAGAGGTESQDWA 134 + D+ + + ++L++ + E ++ SL G DS+ +E+ AG GG E+ +A Sbjct: 73 EDVDEREMAESEMESLRKER-ETVWEDLLSLTVGGEDSHRTRCVMEIRAGTGGDEAALFA 131 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L MYTR+AEK +KTE ++ E G K TL ++G N + L+ E G HR+ R+ Sbjct: 132 RDLFEMYTRYAEKVGWKTELMDASPTEMGGFKDVTLTLEGDNVFRDLQYESGGHRVQRVP 191 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P +D +EI++ D R D + ASG GGQHVN TDSAVR+TH Sbjct: 192 ETETQGRVHTSAATVAVMPEPED-VEIDLKPDDYRKDFFGASGPGGQHVNKTDSAVRLTH 250 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 TG+VVQCQ E+SQHKN A+A +L+A++Y E ++ EE A E+ K IG G ++ Sbjct: 251 HETGIVVQCQDEKSQHKNLAKALRVLKARIY--EKKREEEAAKQAEARKGLIGSGDRSQR 308 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P + D R N+ ++ GDL+ +A + Sbjct: 309 IRTYNF-PQNRLTDHRINLTIYKLDQIIAGDLNPVTEALI 347 >gi|108804488|ref|YP_644425.1| peptide chain release factor 1 [Rubrobacter xylanophilus DSM 9941] gi|119361598|sp|Q1AVG5|RF1_RUBXD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|108765731|gb|ABG04613.1| bacterial peptide chain release factor 1 (bRF-1) [Rubrobacter xylanophilus DSM 9941] Length = 364 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 100/246 (40%), Positives = 142/246 (57%), Gaps = 7/246 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LE+ AG GG E+ +A L MY R+A++ F+ L+ E G K + I Sbjct: 110 DDKDVILEIRAGTGGDEAALFAGDLYEMYARYADRLGFRHRVLDASPAEVGGYKEIIVEI 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY K E G HR+ R+ +S R HTS +++ V P ++ +E+EI+ +D ID Sbjct: 170 EGDGAYSVFKHEGGTHRVQRVPKTESQGRIHTSTATVAVLPEAEE-VEVEINPNDLEIDV 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SG GGQ VNTTDSAVRITH PTG+VV CQ E+SQ +NK QA +LR++L LE + R Sbjct: 229 YRSSGPGGQSVNTTDSAVRITHKPTGLVVTCQNEKSQLQNKEQALRILRSRL--LEREMR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E G+ + G G +IR+Y P + D R + + VL G+L++F KA Sbjct: 287 ERQEREGQMRLAQFGSGDRSAKIRTYNF-PQGRITDHRVGLTVHNLEAVLGGELEEFTKA 345 Query: 350 TLAIKK 355 A ++ Sbjct: 346 LAAKER 351 >gi|325186400|emb|CCA20906.1| peptide chain release factor 1 putative [Albugo laibachii Nc14] Length = 397 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 108/282 (38%), Positives = 159/282 (56%), Gaps = 13/282 (4%) Query: 79 EDDCSILQETSDNLQRIK---LEVEYKQFESLLSGE-ADSNDAYLEVHAGAGGTESQDWA 134 ++D ++Q + LQ K + +E LL + AD + LE+ AG GG E+ +A Sbjct: 106 QNDKELIQLAKEELQEAKEDAIALEKSLTRQLLPRDPADDKNCILEIRAGTGGEEACLFA 165 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 N LL++Y + A R + + L I + G K I+G YG K E GVHR+ R+ Sbjct: 166 NDLLKLYQKIAIMRNWHFQILSISHTDLGGCKECVCTIQGRGVYGQTKFESGVHRVQRVP 225 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 D R HTS S+ V P +++ IE+E++ + RID YRASG+GGQHVNTT+SAVRITH Sbjct: 226 INDV--RVHTSAVSVVVLPEIEE-IEMELNPKELRIDVYRASGSGGQHVNTTESAVRITH 282 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+ Q ERSQH+NKA+A ++LRA++Y+ +R+ + + +IG G + Sbjct: 283 IPTGIQAAVQDERSQHQNKAKAMSILRARVYDQMRDQRD--SKRHQLRSLQIGSGDRSER 340 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IR+Y P V D R N+ L+G+L D + L + Sbjct: 341 IRTYNF-PQSRVSDHRVNVTLYGIERFLNGELMDPLVDALVL 381 >gi|15608439|ref|NP_215815.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv] gi|15840749|ref|NP_335786.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551] gi|31792492|ref|NP_854985.1| peptide chain release factor 1 [Mycobacterium bovis AF2122/97] gi|121637228|ref|YP_977451.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661087|ref|YP_001282610.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra] gi|148822517|ref|YP_001287271.1| peptide chain release factor 1 [Mycobacterium tuberculosis F11] gi|167969626|ref|ZP_02551903.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra] gi|215403141|ref|ZP_03415322.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987] gi|215410938|ref|ZP_03419746.1| peptide chain release factor 1 [Mycobacterium tuberculosis 94_M4241A] gi|215426621|ref|ZP_03424540.1| peptide chain release factor 1 [Mycobacterium tuberculosis T92] gi|215430186|ref|ZP_03428105.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054] gi|215445477|ref|ZP_03432229.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85] gi|218753007|ref|ZP_03531803.1| peptide chain release factor 1 [Mycobacterium tuberculosis GM 1503] gi|219557200|ref|ZP_03536276.1| peptide chain release factor 1 [Mycobacterium tuberculosis T17] gi|224989703|ref|YP_002644390.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo 172] gi|253799655|ref|YP_003032656.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN 1435] gi|254231557|ref|ZP_04924884.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C] gi|254364196|ref|ZP_04980242.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis str. Haarlem] gi|254550307|ref|ZP_05140754.1| peptide chain release factor 1 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186238|ref|ZP_05763712.1| peptide chain release factor 1 [Mycobacterium tuberculosis CPHL_A] gi|260200352|ref|ZP_05767843.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46] gi|260204557|ref|ZP_05772048.1| peptide chain release factor 1 [Mycobacterium tuberculosis K85] gi|289442738|ref|ZP_06432482.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46] gi|289446894|ref|ZP_06436638.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis CPHL_A] gi|289554911|ref|ZP_06444121.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN 605] gi|289569311|ref|ZP_06449538.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis T17] gi|289573962|ref|ZP_06454189.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis K85] gi|289745045|ref|ZP_06504423.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987] gi|289749853|ref|ZP_06509231.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis T92] gi|289753376|ref|ZP_06512754.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054] gi|289757399|ref|ZP_06516777.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85] gi|289761454|ref|ZP_06520832.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM 1503] gi|297633851|ref|ZP_06951631.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN 4207] gi|297730838|ref|ZP_06959956.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN R506] gi|298524803|ref|ZP_07012212.1| peptide chain release factor 1 [Mycobacterium tuberculosis 94_M4241A] gi|306775471|ref|ZP_07413808.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu001] gi|306781618|ref|ZP_07419955.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu002] gi|306784023|ref|ZP_07422345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu003] gi|306788386|ref|ZP_07426708.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu004] gi|306792713|ref|ZP_07431015.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu005] gi|306797119|ref|ZP_07435421.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu006] gi|306802999|ref|ZP_07439667.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu008] gi|306807189|ref|ZP_07443857.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu007] gi|306967388|ref|ZP_07480049.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu009] gi|306971580|ref|ZP_07484241.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu010] gi|307079294|ref|ZP_07488464.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu011] gi|307083863|ref|ZP_07492976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu012] gi|313658170|ref|ZP_07815050.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN V2475] gi|54039048|sp|P66017|RF1_MYCBO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54041593|sp|P66016|RF1_MYCTU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223571|sp|A1KI87|RF1_MYCBP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223574|sp|A5U1Z8|RF1_MYCTA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790891|sp|C1AMU3|RF1_MYCBT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|1322423|emb|CAA97732.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium tuberculosis H37Rv] gi|13880941|gb|AAK45600.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551] gi|31618081|emb|CAD94192.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium bovis AF2122/97] gi|121492875|emb|CAL71346.1| Probable peptide chain release factor 1 prfA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600616|gb|EAY59626.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C] gi|134149710|gb|EBA41755.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis str. Haarlem] gi|148505239|gb|ABQ73048.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra] gi|148721044|gb|ABR05669.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis F11] gi|224772816|dbj|BAH25622.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo 172] gi|253321158|gb|ACT25761.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN 1435] gi|289415657|gb|EFD12897.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46] gi|289419852|gb|EFD17053.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis CPHL_A] gi|289439543|gb|EFD22036.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN 605] gi|289538393|gb|EFD42971.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis K85] gi|289543065|gb|EFD46713.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis T17] gi|289685573|gb|EFD53061.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987] gi|289690440|gb|EFD57869.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis T92] gi|289693963|gb|EFD61392.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054] gi|289708960|gb|EFD72976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM 1503] gi|289712963|gb|EFD76975.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85] gi|298494597|gb|EFI29891.1| peptide chain release factor 1 [Mycobacterium tuberculosis 94_M4241A] gi|308216019|gb|EFO75418.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu001] gi|308325580|gb|EFP14431.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu002] gi|308331256|gb|EFP20107.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu003] gi|308335072|gb|EFP23923.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu004] gi|308338880|gb|EFP27731.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu005] gi|308342494|gb|EFP31345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu006] gi|308346428|gb|EFP35279.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu007] gi|308350299|gb|EFP39150.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu008] gi|308355000|gb|EFP43851.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu009] gi|308358948|gb|EFP47799.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu010] gi|308362830|gb|EFP51681.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu011] gi|308366496|gb|EFP55347.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu012] gi|323720256|gb|EGB29355.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis CDC1551A] gi|326902921|gb|EGE49854.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis W-148] gi|328459401|gb|AEB04824.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN 4207] Length = 357 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/249 (40%), Positives = 143/249 (57%), Gaps = 7/249 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D++D LEV +G GG ES +A L RMY R+AE+ + L+ + G K ATL I Sbjct: 103 DADDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAI 162 Query: 173 KG----PNA-YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 P+ + +K E GVHR+ R+ +S R HTS + + VYP ++ +++I ESD Sbjct: 163 ASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESD 222 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A +L A+L + Sbjct: 223 LRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAM 282 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ A+ +S+ + +IR+Y P + D R + + VLDGDLD Sbjct: 283 AEEQALADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKSHNLDQVLDGDLDAL 341 Query: 347 MKATLAIKK 355 A A K Sbjct: 342 FDALSAADK 350 >gi|226329845|ref|ZP_03805363.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198] gi|225200640|gb|EEG82994.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198] Length = 274 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 81/160 (50%), Positives = 108/160 (67%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY+R+AE R+++ E + ++GE G K + Sbjct: 107 DEFNCFLEIRAGTGGDEAALFAGDLFRMYSRYAESRRWRIEVMNANEGEHGGYKEVIAKV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYG LK E G HR+ R+ +S R HTS ++ V V ++ +IS SD RIDT Sbjct: 167 VGDGAYGVLKFESGGHRVQRVPETESQGRIHTSACTVAVLAEVPEAELPDISPSDLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 +R+SGAGGQHVNTTDSA+RITHIPTG+VV+CQ ERSQHK Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKK 266 >gi|257069075|ref|YP_003155330.1| peptide chain release factor 1 [Brachybacterium faecium DSM 4810] gi|256559893|gb|ACU85740.1| bacterial peptide chain release factor 1 (bRF-1) [Brachybacterium faecium DSM 4810] Length = 378 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 18/290 (6%) Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTESQDW 133 AL E D + +E + R +LE E + E LL+ D+ D LE+ AGAGG ES + Sbjct: 71 ALGEGDEELAREAAQ--LRERLEQEREHLEDLLAPRDPDDARDVILEIKAGAGGEESALF 128 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------AYGWLKGEQG 186 A +LRMY +AE + ++ E L + E G K T+ I Y LK E G Sbjct: 129 AAEMLRMYRAYAESQGWRVEVLTSAESELGGFKDVTVAIAARGAGGSGSGVYAHLKHEAG 188 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI-----SESDCRIDTYRASGAGGQ 241 VHR+ R+ +S R HTS + V P D++ E E+ + ++ RID +R+SG GGQ Sbjct: 189 VHRVQRVPVTESQGRIHTSAVGVLVLPEADEADESELLAEAMAPANLRIDVFRSSGPGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTGVVV CQ ++SQ +N+ QA +LR +L + ++E ++ Sbjct: 249 SVNTTDSAVRITHLPTGVVVSCQDQKSQLQNREQALRILRTRLLDARRAEQEAQSSAARR 308 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P V D RT + + + VL GDL+D + ++ Sbjct: 309 SQVRTVDRSERIRTYNF-PESRVADHRTGYKAGNLAQVLSGDLEDLIASS 357 >gi|229823150|ref|ZP_04449219.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271] gi|229787316|gb|EEP23430.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271] Length = 359 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 115/340 (33%), Positives = 179/340 (52%), Gaps = 13/340 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLIL 72 D + R L+ DP + + + L E L ++ IK ++Q + D + Sbjct: 5 LDALIFRFEELHELLSDPEVISDSKRLRELTIEEADLSPKVAKIKRYKQVQQEIKDTEEM 64 Query: 73 LELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L L+ D + + L ++ +LE E K L D + +E+ AGG E+ Sbjct: 65 LGEGLDADMAELAKMELAELKAEKPRLEEEIKVM-MLPEDPNDGKNIIMEIRGAAGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL MYTR+A+ + +K E L+ + G K +L+I G Y LK E G HR+ Sbjct: 124 QLFAGDLLNMYTRYADSQGWKVEVLDANITGIGGYKEVSLMITGHKVYSKLKFENGAHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P ++ +++++ ++D R+D Y ASGAGGQHVN T SAV Sbjct: 184 QRVPETESQGRVHTSTATVVVMPEAEE-VDLDLKDADIRVDIYHASGAGGQHVNKTASAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+TH+PTGVVV Q ERSQ KN+ +A +LRA++Y++ LQ E A + K +G G Sbjct: 243 RLTHLPTGVVVAMQDERSQLKNREKAMKVLRARVYDM-LQS-EAQAEYDSNRKLAVGTGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P V D R + ++ G LD+ + Sbjct: 301 RSERIRTYNY-PQNRVTDHRIGLTIQQLDAIMSGKLDEII 339 >gi|308071169|ref|YP_003872774.1| peptide chain release factor 1 [Paenibacillus polymyxa E681] gi|305860448|gb|ADM72236.1| Peptide chain release factor 1 (RF-1) [Paenibacillus polymyxa E681] Length = 355 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 146/240 (60%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L RMYTR+A+ + ++ E ++ + + G K +I Sbjct: 106 DDKNVIIEIRGAAGGDEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E G HR+ RI +S R HTS S++ V P ++ ++IEIS+ D R+DT Sbjct: 166 NGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVSVMPEAEE-VDIEISDKDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+TH+PTG++ CQ +SQ+ NK +A +LRA++ ++ L++ Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHMPTGIMATCQDGKSQNSNKEKALQVLRARISDM-LRQE 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE GE K+++G G +IR+Y P V D R + V++G++++ + A Sbjct: 284 EEAKYAGE-RKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTMHKLDQVMNGEIEEIVSA 341 >gi|117927849|ref|YP_872400.1| peptide chain release factor 1 [Acidothermus cellulolyticus 11B] gi|166223522|sp|A0LSK4|RF1_ACIC1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|117648312|gb|ABK52414.1| bacterial peptide chain release factor 1 (bRF-1) [Acidothermus cellulolyticus 11B] Length = 364 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 107/259 (41%), Positives = 154/259 (59%), Gaps = 10/259 (3%) Query: 98 EVEYKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 E ++ SLL+ AD ND +++ AG GG ES +A LLRMY R+AE+R +KTE Sbjct: 83 EAVAERLRSLLA-PADPNDGKDVIMQIKAGEGGEESALFAGDLLRMYLRYAERRGWKTEI 141 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 L+ + + G K T+ I+ + G W LK E GVHR+ R+ +S R HTS + V Sbjct: 142 LDATESDLGGYKDVTVAIRADGSEGAWSRLKFEGGVHRVQRVPVTESQGRIHTSAVGVLV 201 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P ++ ++++I +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ + Sbjct: 202 MPEAEE-VDVQIDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQ 260 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNI 330 NK A +LR++L L ++ E A S+ + +IR+Y P + D R N Sbjct: 261 NKETALRILRSRLLALAQEEAEAQAAAQRRSQVRTVDRSERIRTYNF-PENRISDHRVNY 319 Query: 331 EKTSPSDVLDGDLDDFMKA 349 + + VLDGDLD ++A Sbjct: 320 KAYNLDQVLDGDLDGVIQA 338 >gi|326403021|ref|YP_004283102.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301] gi|325049882|dbj|BAJ80220.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301] Length = 352 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 97/241 (40%), Positives = 141/241 (58%), Gaps = 7/241 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AGG E+ +A L Y R+A+ R ++ E L+ + E G++ Sbjct: 101 ADERPAILEIRPAAGGDEAALFAAELFAAYRRYADLRGWRFEILDYTETELGGLREGIAE 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS ++ V P +D +++E++E+D RID Sbjct: 161 ITGRAVFARLKFESGVHRVQRVPATETQGRIHTSTVTVAVLPEAED-VDVEVNEADLRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +RASGAGGQHVN T+SAVRITH+PTG+VV Q+ERSQHKN+A+A +LRA+LYE Sbjct: 220 VFRASGAGGQHVNKTESAVRITHLPTGIVVAMQEERSQHKNRAKAMKILRARLYEQTRAA 279 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 K+++G G +IR+Y P V D R N+ V+ G+ D+ + Sbjct: 280 AAAGRA--ADRKSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLHKIDRVMLGEFDEIID 336 Query: 349 A 349 A Sbjct: 337 A 337 >gi|254293181|ref|YP_003059204.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814] gi|254041712|gb|ACT58507.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814] Length = 359 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 97/235 (41%), Positives = 138/235 (58%), Gaps = 8/235 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D +A LEV AG GG E+ +A L RMY R+A+ + +K + +G+ G K Sbjct: 106 EDDEANAMLEVRAGTGGDEAALFAGDLFRMYQRYAQIQGWKLDIESQSEGDAGGYKEIIA 165 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G +G +K E GVHR+ R+ +S R HTS +S+ V P + + IEI + RI Sbjct: 166 SVTGKGVFGKMKFESGVHRVQRVPKTESAGRIHTSAASVAVLP-APEQVNIEIKPEEIRI 224 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT R+SGAGGQHVNTTDSAVRI H+PT ++V E+SQH N+A+A ML+ +LYE E Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRIIHLPTNIMV-TSSEKSQHANRARAMEMLKIRLYEKE-- 281 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + E+ A + ++ KT++G G +IR+Y P V D R + +L GD Sbjct: 282 RAEKDAAMADARKTQVGSGDRSEKIRTYNF-PENRVSDHRIKLTLYKLEQILAGD 335 >gi|166368082|ref|YP_001660355.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843] gi|189039979|sp|B0JYC5|RF1_MICAN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166090455|dbj|BAG05163.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843] Length = 366 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 91/243 (37%), Positives = 150/243 (61%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+R+Y+++AE + +K L + G K A L I Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLVRLYSKYAETQNWKVSLLSESQADMGGFKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG N Y LK E GVHR+ R+ +++ R HTS +++ + P VDD +E+ I D + T Sbjct: 172 KGDNVYSKLKFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDD-VEVHIDPKDIELTT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C +ERSQ +N+ +A +LRAKLY+++LQ++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQ 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E + ++++G G +IR+Y + ++ D R N + S +LDGD+++ +++ Sbjct: 291 QEA--VSSMRRSQVGTGSRSEKIRTYNYKDNRLT-DHRLN-QNFSLDRILDGDIEEVIQS 346 Query: 350 TLA 352 +A Sbjct: 347 CIA 349 >gi|148260023|ref|YP_001234150.1| peptide chain release factor 1 [Acidiphilium cryptum JF-5] gi|166223523|sp|A5FX99|RF1_ACICJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146401704|gb|ABQ30231.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium cryptum JF-5] Length = 352 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 97/241 (40%), Positives = 141/241 (58%), Gaps = 7/241 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A LE+ AGG E+ +A L Y R+A+ R ++ E L+ + E G++ Sbjct: 101 ADERPAILEIRPAAGGDEAALFAAELFAAYRRYADLRGWRFEILDYTETELGGLREGIAE 160 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + LK E GVHR+ R+ ++ R HTS ++ V P +D +++E++E+D RID Sbjct: 161 ITGRAVFARLKFESGVHRVQRVPATETQGRIHTSTVTVAVLPEAED-VDVEVNEADLRID 219 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +RASGAGGQHVN T+SAVRITH+PTG+VV Q+ERSQHKN+A+A +LRA+LYE Sbjct: 220 VFRASGAGGQHVNKTESAVRITHLPTGIVVAMQEERSQHKNRAKAMKILRARLYEQTRAA 279 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 K+++G G +IR+Y P V D R N+ V+ G+ D+ + Sbjct: 280 AAAGRA--ADRKSQVGTGDRSERIRTYNF-PQGRVTDHRINLTLHKIDRVMLGEFDEIID 336 Query: 349 A 349 A Sbjct: 337 A 337 >gi|114797902|ref|YP_759355.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444] gi|119361550|sp|Q0C4I8|RF1_HYPNA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114738076|gb|ABI76201.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444] Length = 352 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/243 (40%), Positives = 146/243 (60%), Gaps = 9/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LEV AG GG E+ +A L RMYTR+A+ + E +++ G+ G K + Sbjct: 100 DKADIVLEVRAGTGGDEAALFAGDLFRMYTRFAQIMGWSVEIVDVAPGDAGGYKEIIANV 159 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G +K E GVHR+ R+ ++ R HTS +++ V P ++IEIE+ D RIDT Sbjct: 160 SGDGVFGRMKWESGVHRVQRVPATETQGRIHTSAATVAVLPA-PENIEIEVRADDIRIDT 218 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SGAGGQHVNTTDSAVRITH+PTG++V E+SQH N+ +A + L+ +LYE E + Sbjct: 219 MRSSGAGGQHVNTTDSAVRITHLPTGIMV-TSSEKSQHVNREKAMDQLKIRLYERE--RA 275 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 E+ A E+ ++IG G +++R+Y P + D R + S ++ GD L D ++ Sbjct: 276 EKDAARSEARASQIGSGDRSQKVRTYNY-PENRLTDHRIGLTLYSLDRIITGDKLGDVIE 334 Query: 349 ATL 351 A + Sbjct: 335 ALI 337 >gi|303232564|ref|ZP_07319250.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4] gi|302481351|gb|EFL44425.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4] Length = 354 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 121/325 (37%), Positives = 175/325 (53%), Gaps = 15/325 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE--EDDCS 83 L K DP + + E + +E H ++ KE L D E+ E D+ Sbjct: 15 LEKKMVDPAVVADQKEYTRIAKEHAHQSELVALAKEYIAALDDIEAAKEMLHEASSDERE 74 Query: 84 ILQ-ETSDNLQRIK-LEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRM 140 +LQ + + N +++ LE + K L+ G+ D D +E+ A AGG E+ +A L +M Sbjct: 75 MLQADIAANEEKLPALEDDIKIM--LIPGDPNDEKDTIVEIRAAAGGDEAAIFAGDLYKM 132 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R+A+ + +K E L E G K+ + G Y +K E GVHR+ R+ +S Sbjct: 133 YERFADSKHWKIEVLSSSPSEAGGFKTIEFKMLGDKVYSVMKYESGVHRVQRVPKTESQG 192 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R TS +++ V P D+ I+++I +D RIDTY ASG GGQ VNTT SAVRITH+PT V Sbjct: 193 RIQTSTATVAVLPEADE-IDVQIDPTDLRIDTYCASGPGGQCVNTTYSAVRITHLPTNTV 251 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 VQ Q +RSQ +N+ MLRA+LYE+EL+K++ A G ++IG G +IR+Y Sbjct: 252 VQSQDQRSQIQNREVCMQMLRARLYEMELEKQQ--AEQGAERLSQIGRGNRSEKIRTYN- 308 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGD 342 QP V D R T + VL GD Sbjct: 309 QPQDRVTDHRIGFNSTY-NGVLLGD 332 >gi|288922982|ref|ZP_06417139.1| peptide chain release factor 1 [Frankia sp. EUN1f] gi|288345658|gb|EFC80030.1| peptide chain release factor 1 [Frankia sp. EUN1f] Length = 356 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 121/335 (36%), Positives = 180/335 (53%), Gaps = 14/335 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + + DP + + A+ L R L + ++ D ELA E D S Sbjct: 15 IEKRLADPAIHNDPSVARELSRRYAELATPVDLALRLESVEGDLEAARELA--EQDASFR 72 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E + L+ + E+ + L+ + D S DA LEV AGAGG ES +A LLRMY R+ Sbjct: 73 DEIT-ALEDSRAELASRLRAYLVPTDPDDSRDAILEVKAGAGGEESALFAGDLLRMYLRY 131 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPN--AYGWLKGEQGVHRLVRISPYD 197 AE+R ++TE L+ + + G + ++ +K GP +G L+ E GVHR+ R+ + Sbjct: 132 AERRGWRTEILDANPSDLGGYRDVSVAVKARGSAGPGQGVFGRLRFEGGVHRVQRVPVTE 191 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS + + V P +++++ +D RID +R+SG GGQ VNTTDSAVRITH+PT Sbjct: 192 SAGRIHTSAAGVLVLPEAA-DVDVDVDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPT 250 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYV 316 GVVV CQ E+SQ +NK A +LR++L +K E A +S+ + +IR+Y Sbjct: 251 GVVVSCQNEKSQLQNKESAMRILRSRLLAAAREKAESEAAAARASQVRTVDRSEKIRTYN 310 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 P + D R N + + VLDGDLD + A + Sbjct: 311 F-PENRISDHRINYKAHNLEQVLDGDLDAVVDALI 344 >gi|126311212|ref|XP_001381267.1| PREDICTED: similar to Mitochondrial translational release factor 1-like [Monodelphis domestica] Length = 567 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/224 (45%), Positives = 132/224 (58%), Gaps = 7/224 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LE+ AG GG E+ + + MY R+A +K+ E LE E G++ A Sbjct: 124 SEETDENDLILELTAGVGGQEAMLFTAEMFDMYQRYATYKKWHFEILEYFPSEIGGLRHA 183 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I GP AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ + Sbjct: 184 SASIGGPEAYRHMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAILPQPTE-INLVINPKEL 242 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RI+T RASGAGGQHVNTTDSAVRI H+PTGV +CQQERSQ KNK A LRAKLY + Sbjct: 243 RIETKRASGAGGQHVNTTDSAVRIVHLPTGVATECQQERSQIKNKEMAMKKLRAKLYSML 302 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTN 329 L+ EE + K +IG GR +IR+Y P V D R + Sbjct: 303 LE--EETNKRYSARKIQIGTKGRSEKIRTYHF-PQNRVTDHRIS 343 >gi|183222627|ref|YP_001840623.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912661|ref|YP_001964216.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238687790|sp|B0SH84|RF1_LEPBA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238687821|sp|B0SQV0|RF1_LEPBP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167777337|gb|ABZ95638.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781049|gb|ABZ99347.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 353 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/251 (39%), Positives = 143/251 (56%), Gaps = 12/251 (4%) Query: 107 LLSGEADSNDAYL-EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL + +S + L E+ AG GG ES + L RMY ++A+K+ + E +++ G Sbjct: 96 LLPPDPNSGKSILVEIRAGTGGEESGLFCADLFRMYNKYADKKGLRVEIIDMSQTGIGGY 155 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K + AY K E G HR+ RI +S R HTS ++ + P ++ E+EI E Sbjct: 156 KEIVFSLDDDKAYDLFKFESGTHRVQRIPETESGGRIHTSAVTVAILPEAEEK-EVEIKE 214 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RID YR+SGAGGQHVNTTDSAVRITHIPTG+VV Q+ERSQ KN+ +A +LRA++ Sbjct: 215 SDLRIDVYRSSGAGGQHVNTTDSAVRITHIPTGIVVASQEERSQIKNRDKAMRVLRARIA 274 Query: 286 ELELQKREEIANIGESS--KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 + + E A + + K ++G G +IR+Y P D R + +++ Sbjct: 275 D----QAAETAKLSADALKKAQVGSGDRSERIRTYNF-PQGRCTDHRIGFTSHNLPAIME 329 Query: 341 GDLDDFMKATL 351 GDLD+ + A + Sbjct: 330 GDLDELIDALI 340 >gi|34557214|ref|NP_907029.1| peptide chain release factor 1 [Wolinella succinogenes DSM 1740] gi|46576699|sp|Q7M9M4|RF1_WOLSU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|34482930|emb|CAE09929.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Wolinella succinogenes] Length = 355 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 94/244 (38%), Positives = 141/244 (57%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ + L + Y R+A+ + +K E + + G K LI Sbjct: 104 DDKNIYLEIRAGTGGDEAGIFVGDLFKSYCRYADLKGWKVEIISSSENSVGGYKEVIALI 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ +D +ID Sbjct: 164 KGNGVYSRLKYEGGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVNINPNDLKIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+ G GGQ VNTTDSAVRITH+PTG+ V Q E+SQHKNK +A +L+A+LYE EL+ + Sbjct: 223 FRSGGHGGQSVNTTDSAVRITHLPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAK 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV-LDGDLDDFMK 348 ++ + K ++G G +IR+Y P + D R + S ++ L G+ D + Sbjct: 283 --LSENSAARKLQVGSGDRSERIRTYNY-PQNRLTDHRIGLTLYSLEEIMLSGNFDQVVD 339 Query: 349 ATLA 352 +A Sbjct: 340 PIVA 343 >gi|170070084|ref|XP_001869460.1| peptide chain release factor 1 [Culex quinquefasciatus] gi|167866004|gb|EDS29387.1| peptide chain release factor 1 [Culex quinquefasciatus] Length = 425 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 103/261 (39%), Positives = 157/261 (60%), Gaps = 17/261 (6%) Query: 66 LCDNLI-LLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLE 120 + DNL L E+ E+D+ +++E + I +++ + + +LS E D + LE Sbjct: 114 IVDNLSSLAEMGAEKDEDMLQLMKEEKEAYTNILRKLDGEIMDGILSMDEEEDYSSLILE 173 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 V AG GG E+ +A + MY + E + ++ E L+ D E GI+ A+++I G +AY + Sbjct: 174 VAAGVGGQEAMLFAREVFDMYCGFVEFKGWEIEMLQTEDTELGGIRHASMVINGRDAYRF 233 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHR+ RI + ++R HTS +++ V P D+ +IE+ + D +I+T RASGAGG Sbjct: 234 LKFEAGVHRVQRIPSTEKSARIHTSTATVSVLPRPDE-FQIELKDKDLKIETKRASGAGG 292 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----- 295 QHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK A L AKL + EL+ + Sbjct: 293 QHVNTTDSAVRIVHLPTGMAVECQTERSQGKNKEIAKQKLLAKLTQQELESKFNAKQSLK 352 Query: 296 -ANIGESSKTEIGWGRQIRSY 315 + +G S++ E +IR+Y Sbjct: 353 KSQVGSSTRNE-----KIRTY 368 >gi|16804581|ref|NP_466066.1| peptide chain release factor 1 [Listeria monocytogenes EGD-e] gi|224500713|ref|ZP_03669062.1| peptide chain release factor 1 [Listeria monocytogenes Finland 1988] gi|224503217|ref|ZP_03671524.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-561] gi|255029752|ref|ZP_05301703.1| peptide chain release factor 1 [Listeria monocytogenes LO28] gi|20139329|sp|Q8Y4A8|RF1_LISMO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|16412031|emb|CAD00621.1| prf1 [Listeria monocytogenes EGD-e] Length = 358 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 117/351 (33%), Positives = 191/351 (54%), Gaps = 20/351 (5%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 ++D AV+ R LN DP + + + L +E+ + + +E + +++ + Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125 LL L+++ + +E LQ+ K ++E + LL D ND LE+ A Sbjct: 61 TKELLGEKLDDEMREMAKEEFAELQKEKTDLEERL--KLLLVPKDPNDDKNVILEIRGAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E Sbjct: 119 GGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYEN 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT+ ++GAGGQ VNT Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSK 303 T SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + REE AN K Sbjct: 238 TMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RK 293 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +G G +IR+Y P V D R + +++G LD+ + A + Sbjct: 294 SAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343 >gi|34539945|ref|NP_904424.1| peptide chain release factor 1 [Porphyromonas gingivalis W83] gi|46576709|sp|Q7MXT5|RF1_PORGI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|34396256|gb|AAQ65323.1| peptide chain release factor 1 [Porphyromonas gingivalis W83] Length = 361 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/242 (37%), Positives = 141/242 (58%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A +E+ G GG E+ +A L RMY ++ E + ++ E ++ +G G K + Sbjct: 111 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG YG LK E GVHR+ R+ ++ R HTS +++ V P ++ +++EI+ +D + T Sbjct: 171 KGEGVYGILKYESGVHRVQRVPATETQGRIHTSAATVAVLPEAEE-VDVEINPADIEMQT 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++ V++TH PTG+VV CQQ RSQ N+ A MLR+KLY++EL K Sbjct: 230 SRSGGAGGQNVNKVETKVQLTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKH 289 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E I KT + G +IR+Y P V D R N+ + S V+DG++ F+ A Sbjct: 290 NEA--IAARRKTMVSTGDRSAKIRTYNY-PQGRVTDHRINMTVYNLSAVMDGEVQPFIDA 346 Query: 350 TL 351 + Sbjct: 347 LI 348 >gi|327404087|ref|YP_004344925.1| peptide chain release factor 1 (bRF-1) [Fluviicola taffensis DSM 16823] gi|327319595|gb|AEA44087.1| bacterial peptide chain release factor 1 (bRF-1) [Fluviicola taffensis DSM 16823] Length = 359 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 109/313 (34%), Positives = 171/313 (54%), Gaps = 20/313 (6%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQF 104 R+ + +D A K + D L + +LE+ + + + + + L QR +E E K Sbjct: 42 RDLEEVDAAYKSYKNVLDNLKSSKEMLEVETDPEMREMAKMEINELEQQRPIIEEEIKVL 101 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 E D N A +E+ AG GG E+ + + RMYT + ++ + E + +G G Sbjct: 102 LIPKDPEDDKN-AIIELRAGTGGDEACIFVEDIYRMYTMYFKEMGWAYEIVNSSEGSAKG 160 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K ++ I G YG LK E GVHR+ R+ +S R HTS ++ V P ++ ++ E+ Sbjct: 161 YKEVSMSISGAGIYGMLKFESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDFELD 219 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D R DT+RASGAGGQH+N T+SA+R+THIPTG VV+CQ RSQHKN AQA ++LR++L Sbjct: 220 MNDVRKDTFRASGAGGQHINKTESAIRLTHIPTGTVVECQDGRSQHKNLAQAISVLRSRL 279 Query: 285 YELELQK--------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 Y+ EL + R+ + + G+ S +IR+Y P + D R N + S Sbjct: 280 YQAELDRVHQERAAHRKTLVSTGDRSA-------KIRTYNY-PQGRITDHRINKTIYNLS 331 Query: 337 DVLDGDLDDFMKA 349 ++GD+ + + A Sbjct: 332 AFMNGDVQEMIDA 344 >gi|158520489|ref|YP_001528359.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3] gi|238686878|sp|A8ZTL8|RF1_DESOH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|158509315|gb|ABW66282.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3] Length = 356 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 104/278 (37%), Positives = 158/278 (56%), Gaps = 11/278 (3%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEY--KQFESLLSGE--ADSNDAYLEVHAGAGGTESQD 132 LE+ D I + + + R+K E E + ++LL+ + D+ + +E+ AG GG E+ Sbjct: 65 LEDRDPEIRELAKEEISRLKDERERLDGELQNLLTPKDPNDNKNVLVEIRAGTGGEEASL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A+ L RMY R+AE +KTE + G K ++ G AY LK E G+HR+ R Sbjct: 125 FAHDLFRMYWRYAETMGWKTEIMSSSVTGSGGFKEVIFMVYGKGAYSHLKFESGIHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V ++ +E+ I S+ + D +R+SG GGQ VNTTDSAVR+ Sbjct: 185 VPETEAQGRIHTSAVTVAVLAEAEE-VELHIDPSEIKTDVFRSSGPGGQSVNTTDSAVRL 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310 TH+PTGVVV CQ E+SQ KNK +A +LRA+L + +Q + E I ++ K ++G G Sbjct: 244 THLPTGVVVICQDEKSQLKNKNKAMKVLRARLLDRMIQDQNE--KIAQNRKDQVGSGDRS 301 Query: 311 -QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P V D R I VL GDL + + Sbjct: 302 GRIRTYNF-PQGRVTDHRAGITLYKLESVLQGDLSELV 338 >gi|46908715|ref|YP_015104.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b str. F2365] gi|47093870|ref|ZP_00231612.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b H7858] gi|217963353|ref|YP_002349031.1| peptide chain release factor 1 [Listeria monocytogenes HCC23] gi|226225091|ref|YP_002759198.1| peptide chain release factor 1 [Listeria monocytogenes Clip81459] gi|254825334|ref|ZP_05230335.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194] gi|254828119|ref|ZP_05232806.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165] gi|254831034|ref|ZP_05235689.1| peptide chain release factor 1 [Listeria monocytogenes 10403S] gi|254853928|ref|ZP_05243276.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503] gi|254900318|ref|ZP_05260242.1| peptide chain release factor 1 [Listeria monocytogenes J0161] gi|254913443|ref|ZP_05263455.1| peptide chain release factor 1 [Listeria monocytogenes J2818] gi|254932215|ref|ZP_05265574.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262] gi|254937824|ref|ZP_05269521.1| peptide chain release factor 1 [Listeria monocytogenes F6900] gi|254993429|ref|ZP_05275619.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-064] gi|255026493|ref|ZP_05298479.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-003] gi|255519761|ref|ZP_05386998.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-175] gi|284802981|ref|YP_003414846.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578] gi|284996122|ref|YP_003417890.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923] gi|290892706|ref|ZP_06555698.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071] gi|300764957|ref|ZP_07074945.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017] gi|61214637|sp|Q71WN5|RF1_LISMF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790886|sp|B8DBG6|RF1_LISMH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|259585225|sp|C1KYW0|RF1_LISMC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46881987|gb|AAT05281.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b str. F2365] gi|47017744|gb|EAL08535.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b H7858] gi|217332623|gb|ACK38417.1| peptide chain release factor 1 [Listeria monocytogenes HCC23] gi|225877553|emb|CAS06267.1| Putative peptide chain release factor 1 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600504|gb|EEW13829.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165] gi|258607316|gb|EEW19924.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503] gi|258610428|gb|EEW23036.1| peptide chain release factor 1 [Listeria monocytogenes F6900] gi|284058543|gb|ADB69484.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578] gi|284061589|gb|ADB72528.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923] gi|290557766|gb|EFD91288.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071] gi|293583770|gb|EFF95802.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262] gi|293591450|gb|EFF99784.1| peptide chain release factor 1 [Listeria monocytogenes J2818] gi|293594577|gb|EFG02338.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194] gi|300514257|gb|EFK41316.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017] gi|307572070|emb|CAR85249.1| peptide chain release factor 1 [Listeria monocytogenes L99] gi|332312973|gb|EGJ26068.1| Peptide chain release factor 1 [Listeria monocytogenes str. Scott A] Length = 358 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 117/351 (33%), Positives = 191/351 (54%), Gaps = 20/351 (5%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 ++D AV+ R LN DP + + + L +E+ + + +E + +++ + Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125 LL L+++ + +E LQ+ K ++E + LL D ND LE+ A Sbjct: 61 TKELLGEKLDDEMREMAKEEFAELQKEKADLEERL--KLLLVPKDPNDDKNVILEIRGAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E Sbjct: 119 GGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYEN 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT+ ++GAGGQ VNT Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSK 303 T SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + REE AN K Sbjct: 238 TMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RK 293 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +G G +IR+Y P V D R + +++G LD+ + A + Sbjct: 294 SAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343 >gi|188995885|ref|YP_001930137.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC 33277] gi|188595565|dbj|BAG34540.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC 33277] Length = 352 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/242 (37%), Positives = 141/242 (58%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A +E+ G GG E+ +A L RMY ++ E + ++ E ++ +G G K + Sbjct: 102 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSV 161 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG YG LK E GVHR+ R+ ++ R HTS +++ V P ++ +++EI+ +D + T Sbjct: 162 KGEGVYGILKYESGVHRVQRVPATETQGRIHTSAATVAVLPEAEE-VDVEINPADIEMQT 220 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++ V++TH PTG+VV CQQ RSQ N+ A MLR+KLY++EL K Sbjct: 221 SRSGGAGGQNVNKVETKVQLTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKH 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E I KT + G +IR+Y P V D R N+ + S V+DG++ F+ A Sbjct: 281 NEA--IAARRKTMVSTGDRSAKIRTYNY-PQGRVTDHRINMTVYNLSAVMDGEVQPFIDA 337 Query: 350 TL 351 + Sbjct: 338 LI 339 >gi|325963840|ref|YP_004241746.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter phenanthrenivorans Sphe3] gi|323469927|gb|ADX73612.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter phenanthrenivorans Sphe3] Length = 357 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 98/248 (39%), Positives = 145/248 (58%), Gaps = 12/248 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + LEV G GG E+ +A LLRMYTR+AE R +KTE + + + G K + + Sbjct: 100 DARNVILEVKGGEGGDEAALFAGDLLRMYTRYAESRGWKTEIISATESDLGGYKDVQVAV 159 Query: 173 KG------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG Y LK E GVHR+ R+ +S R HTS + + V P VD+ E+EI+++ Sbjct: 160 KGNSNDPAEGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQN 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ +LRA++ Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARI-- 277 Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L Q+ + A K++I +IR+Y P + D RT + + V++GDL Sbjct: 278 LAHQQEQIDAENSAQRKSQIRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDL 336 Query: 344 DDFMKATL 351 + +++ + Sbjct: 337 EPVIQSAI 344 >gi|255533998|ref|YP_003094370.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366] gi|255346982|gb|ACU06308.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366] Length = 357 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 90/240 (37%), Positives = 144/240 (60%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A E+ G GG E+ +A L RMY+R+ E++ +K E +++ +G G K L + Sbjct: 106 DAKNAVFEIRGGTGGDEAALFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ I++ I+ +D + T Sbjct: 166 SGEDVYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAEE-IDLYINPADIDLQT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++ V++TH P+G+VV CQQERSQ N+ A MLR+KLY++ELQK+ Sbjct: 225 SRSGGAGGQNVNKVETKVQLTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKK 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +I KT + G +IR+Y P V D R + + + ++DG + + + A Sbjct: 285 N--GDIAARRKTMVSTGDRSAKIRTYNY-PQGRVTDHRIGLTLYNLNSIMDGGVQELIDA 341 >gi|221128345|ref|XP_002163029.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 400 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 102/272 (37%), Positives = 161/272 (59%), Gaps = 24/272 (8%) Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +QE Q ++E + +S++ + D SN+A +E+ AG GG E+ +A +L MY Sbjct: 111 FVQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGTGGREAAIFAAEMLSMYD 170 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 +++ ++K E L+ + + G+K ++ I G +G LK E GVHR+ R+ +S R Sbjct: 171 KYSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEIGVHRVQRVPITESLGRV 230 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS ++ V P +SI++ ++ D ++DT+R+SGAGGQHVNTTDSAVR+THIP+G+VV Sbjct: 231 HTSTVTVAVLPQ-PESIDVVLNMKDVKVDTFRSSGAGGQHVNTTDSAVRLTHIPSGLVVA 289 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELE----LQKREEIANIGESSKTEIGWGR---QIRSY 315 Q +RSQ +NK++A +L A+LY+ E +Q+R E+ +T+IG G +IR+Y Sbjct: 290 VQSQRSQIENKSRALKILSAQLYDFERTRVVQERVEL------RRTQIGSGHRSERIRTY 343 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 P + D R + L G L DFM Sbjct: 344 NF-PQDRITDHRIG-------ETLSG-LSDFM 366 >gi|158312864|ref|YP_001505372.1| peptide chain release factor 1 [Frankia sp. EAN1pec] gi|238686837|sp|A8L3V1|RF1_FRASN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|158108269|gb|ABW10466.1| peptide chain release factor 1 [Frankia sp. EAN1pec] Length = 356 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 104/245 (42%), Positives = 147/245 (60%), Gaps = 10/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS DA LEV AGAGG ES +A LLRMY R+AE+R ++T+ L+ + + G + ++ + Sbjct: 100 DSRDAILEVKAGAGGEESALFAGDLLRMYLRYAERRGWRTQILDANPSDLGGYRDVSVAV 159 Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K G +G L+ E GVHR+ R+ +S R HTS + + V P D ++IE+ Sbjct: 160 KSRGTAAPGQGVFGRLRFEGGVHRVQRVPVTESAGRIHTSAAGVLVLPEAAD-VDIEVDP 218 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID +R+SG GGQ VNTTDSAVRITH+PTGVVV CQ E+SQ +NK A +LRA+L Sbjct: 219 NDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKESAMRILRARLL 278 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +K E A +S+ + ++R+Y P + D R + + VLDGDLD Sbjct: 279 AAAREKAETAAAAARASQVRTVDRSEKVRTYNF-PENRISDHRIGYKAHNLEAVLDGDLD 337 Query: 345 DFMKA 349 ++A Sbjct: 338 AVIEA 342 >gi|295099339|emb|CBK88428.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium cylindroides T2-87] Length = 316 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 125/204 (61%), Gaps = 3/204 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS++A++E+ AGG E+ +A L RMY ++AE + +K E + D E G T + Sbjct: 108 DSHNAFMEIRGAAGGDEANIFAGDLFRMYAKYAESKGWKVEVTDSEDSEAGGFSLITFKV 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G NAYG LK E G HR+ R+ +S R TS +++ YP +D+ + +I +D I+ Sbjct: 168 TGQNAYGTLKFESGSHRVQRVPKTESQGRIQTSTATVLCYPELDEE-DFDIDMNDLEIEA 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVN TDSAVRI H PTG+VV+CQ RSQH+N+A A + A++ E ++ Sbjct: 227 MRASGAGGQHVNKTDSAVRIVHKPTGIVVKCQDGRSQHENRATALATIAARVKEEHQREL 286 Query: 293 EEIANIGESSKTEIGWGRQIRSYV 316 +E A G +T+IG G + +V Sbjct: 287 DEKA--GAERRTKIGTGDRAERFV 308 >gi|218297203|ref|ZP_03497865.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23] gi|218242480|gb|EED09019.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23] Length = 176 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 86/164 (52%), Positives = 110/164 (67%), Gaps = 1/164 (0%) Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 +R SP+D++ RRHTSF+ + V P VDD++E+ I D RID +R+ G GGQ VNTTDSAV Sbjct: 1 MRPSPFDASGRRHTSFAGVEVMPEVDDTVEVVIRPEDLRIDVFRSQGHGGQGVNTTDSAV 60 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V CQ RSQ KNK A +LR++L+ELE +K++E I WG Sbjct: 61 RIVHLPTGITVTCQTTRSQIKNKELALKVLRSRLFELEWKKKQEELQKLRGEVRPIEWGS 120 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYVL Q VKD RT + + P +VLDGDL DF+ A L K Sbjct: 121 QIRSYVLD-KQYVKDHRTGLMRFDPQNVLDGDLMDFIWAGLEWK 163 >gi|315092115|gb|EFT64091.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA4] Length = 379 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 102/270 (37%), Positives = 153/270 (56%), Gaps = 24/270 (8%) Query: 94 RIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R +L++ + LL S D DA +E+H+G GG ES +A LLRMY R+AE+ + Sbjct: 101 RGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAADLLRMYIRYAERVGWS 160 Query: 152 TEALEIHDGEEAGIKSATLLIKG-P--NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 L + G ++ + + G P AYG+LK E GVHR+ R+ +S+ R HTS Sbjct: 161 VRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQRVPVTESSGRIHTSAVG 220 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD++ E++I ++ R+D YR+SG GGQ VNTTDSAVR+TH+ TG+VV CQ ERS Sbjct: 221 VLVMPDVDET-EVDIDPAEIRVDVYRSSGPGGQGVNTTDSAVRLTHLSTGIVVSCQNERS 279 Query: 269 QHKNKAQAWNMLRAKLY---------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 Q +NKA+A MLRAK+ E + +R+++ + S++ +R+Y Sbjct: 280 QLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR--------VRTYNFSQ 331 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ D R + +L GDL D + A Sbjct: 332 NRLT-DHRIGYKSRKLDQILAGDLGDVLDA 360 >gi|332653076|ref|ZP_08418821.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16] gi|332518222|gb|EGJ47825.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16] Length = 354 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 91/243 (37%), Positives = 145/243 (59%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +A+ L RMY+ +AE +KTE + + E G+K + I Sbjct: 103 DDKNVIVEIRAGVGGEEAALFAHSLYRMYSMFAEANHWKTEVDSVSETELGGVKEISFTI 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ R+ +S R HTS ++ V P ++ + +++I+ +D + Sbjct: 163 EGDGAYSRLKFESGVHRVQRVPETESGGRVHTSTVTVAVLPEME-TADVQINPADIEMQV 221 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T SAVR+ H PTG VV+CQQERSQ +N+ +A +L ++LYE E +K Sbjct: 222 FRSSGAGGQHVNKTSSAVRLIHKPTGTVVECQQERSQFQNRDKAMRILASRLYEAEQEKI 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + ++++G G +IR+Y P V D R + ++++GDL++ + A Sbjct: 282 S--SEYTAQRRSQVGSGMRNERIRTYNF-PQGRVTDHRIGLTLYKIDNIMNGDLNEVIDA 338 Query: 350 TLA 352 A Sbjct: 339 LAA 341 >gi|26553517|ref|NP_757451.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2] gi|32171558|sp|Q8EWY5|RF1_MYCPE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|26453523|dbj|BAC43855.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2] Length = 359 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 94/243 (38%), Positives = 143/243 (58%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG ES + L Y R+A+ +K + LE+ + G + +I Sbjct: 110 DDKNVIVEMRPAAGGDESSIFVGDLFSAYKRYADSLGWKVKMLEVQESSH-GYGFISFMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y +K E GVHR+ R+ +S R HTS ++ V P +++ +E+ I+ SD +IDT Sbjct: 169 NGENVYSKMKFESGVHRVQRVPATESKGRVHTSTITVAVLPELEE-VELVINNSDLKIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQH+N T+SAVRITHIPTG+ V CQ+ +SQ +N+ A MLRAKL+ E ++ Sbjct: 228 YRASGAGGQHINKTESAVRITHIPTGIFVACQEGKSQIENRETAMKMLRAKLW--EKKEE 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E NI + K ++G G +IR+Y P V D R N+ +V+ G+L + + + Sbjct: 286 ENRKNISDLRKGQVGTGERAEKIRTYNY-PQNRVTDHRINLTLNKLDNVMLGNLSEIIDS 344 Query: 350 TLA 352 ++ Sbjct: 345 LIS 347 >gi|326382082|ref|ZP_08203775.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL B-59395] gi|326199508|gb|EGD56689.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL B-59395] Length = 364 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/249 (41%), Positives = 145/249 (58%), Gaps = 7/249 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS+D LEV +GAGG ES +A+ L+RMY ++ E+ +K L + + G K ATL I Sbjct: 111 DSDDVVLEVKSGAGGEESALFASDLVRMYLKYCERHGWKATVLGATESDLGGYKEATLSI 170 Query: 173 KG-----PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K + LK E GVHR+ R+ +S R HTS + + +YP D+ EI+I ESD Sbjct: 171 KARETVRDGVWSRLKFEGGVHRVQRVPVTESQGRIHTSAAGVLIYPEPDEVEEIQIDESD 230 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RID YR+SG GGQ VNTTDSAVRITH+PT +VV CQ ERSQ +NKA+A +L A+L Sbjct: 231 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLKAA 290 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ E A+ G ++ + +IR+Y P + D R + + VL G++D Sbjct: 291 AEEEAEAEASAGRQAQIRTVDRSERIRTYNF-PENRITDHRIGYKANNLDSVLGGEMDAL 349 Query: 347 MKATLAIKK 355 + A + K Sbjct: 350 LDALVEADK 358 >gi|171057271|ref|YP_001789620.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6] gi|238689096|sp|B1XYX1|RF1_LEPCP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|170774716|gb|ACB32855.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6] Length = 360 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 116/341 (34%), Positives = 180/341 (52%), Gaps = 25/341 (7%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---------LCDNLIL 72 RL+ ++ DP + + + L RE + + + + R L D + Sbjct: 15 RLAEIDAALADPKVCSQIGTLRSLNREHARVSALVDRWQRYEQREQDLAGAQELLDEPEM 74 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQ 131 ELA E + +L R+ E+ +L+ +AD + +A++E+ AG GG ES Sbjct: 75 AELARAE-----IGAAQADLDRLDSEL----LTALMPRDADDDRNAFVEIRAGTGGEESA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R AE+R +KTE + + G K L I G + LK E G HR+ Sbjct: 126 LFAADLARMYLRHAERRGWKTELMSESVSDLGGYKDVVLHIIGDAVFEALKYESGGHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ V D++ E+ ++ ++ RIDTYRASGAGGQH+N TDSAVR Sbjct: 186 RVPATEAQGRIHTSACTVAVLAEADEAEEVSLNPAELRIDTYRASGAGGQHINKTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+V +CQ +RSQH+NKA+A + + ++E+ A + K+ IG G Sbjct: 246 VTHLPTGLVAECQDDRSQHRNKARALAV--LAARLRDRVRQEQAAKDAAARKSLIGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R N+ VL+GDLD+ + A Sbjct: 304 SDRIRTYNF-PQGRLTDHRINLTLYKLGAVLEGDLDEVIGA 343 >gi|238855957|ref|ZP_04646243.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3] gi|260664674|ref|ZP_05865526.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US] gi|282934364|ref|ZP_06339631.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1] gi|313471876|ref|ZP_07812368.1| peptide chain release factor 1 [Lactobacillus jensenii 1153] gi|238831430|gb|EEQ23781.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3] gi|239529209|gb|EEQ68210.1| peptide chain release factor 1 [Lactobacillus jensenii 1153] gi|260561739|gb|EEX27711.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US] gi|281301574|gb|EFA93851.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1] Length = 362 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/298 (34%), Positives = 165/298 (55%), Gaps = 12/298 (4%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADSNDA 117 +E Q + DN ++E + D + +E + +L++ LE E K L D D Sbjct: 55 QEDQKTISDNKEIIESESDADLVEMAKEENSDLEKEVADLEEEIKIL-MLPKDPNDDKDI 113 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 +E+ AGG E+ +A LLRMY ++AE + +K ++ E G K ++I G Sbjct: 114 IMEIRGAAGGDEASLFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKV 173 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ RI +S R HTS +++ V P + ++I++ D R+D YR+SG Sbjct: 174 YSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDVYRSSG 232 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIA 296 AGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+A+A +L++++Y+ E Q + A Sbjct: 233 AGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQ---A 289 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E K +G G +IR+Y P V D R + +++G+LD+ + A + Sbjct: 290 SYDEKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIISALI 346 >gi|328947853|ref|YP_004365190.1| peptide chain release factor 1 [Treponema succinifaciens DSM 2489] gi|328448177|gb|AEB13893.1| Peptide chain release factor 1 [Treponema succinifaciens DSM 2489] Length = 361 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 95/240 (39%), Positives = 139/240 (57%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ + AGG E+ + L MY AE++ +KTE +E + E G I Sbjct: 108 DEKNIILEIRSAAGGDEASLFVRDLWEMYMHLAERKGWKTETMEAQETEVGGFNKIVTSI 167 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG L+ E GVHR+ R+ +S R TS ++ V P +++ EI+I D R+D Sbjct: 168 AGKFVYGTLRWESGVHRVQRVPATESQGRLQTSTVTVAVLPEAEET-EIQIRPEDVRVDV 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RA G GGQ VNTTDSAVR+THIPTG+VV Q E+SQHKNK +A+ +LRA+L++LE KR Sbjct: 227 MRAGGPGGQCVNTTDSAVRLTHIPTGIVVIQQDEKSQHKNKDKAFRVLRARLFDLEESKR 286 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + ++ K +G G +IR+Y P V D R N+ + + G++D+ + A Sbjct: 287 Q--SERADARKNMVGSGARSEKIRTYNF-PQDRVTDHRINLSLHNLPSFMMGNMDEMLDA 343 >gi|13508100|ref|NP_110049.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129] gi|2500138|sp|P75420|RF1_MYCPN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|1674166|gb|AAB96123.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129] Length = 359 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 112/321 (34%), Positives = 176/321 (54%), Gaps = 14/321 (4%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ-ETSDNLQRIKLEV-E 100 K + +E +H + KE + RL D + E LE ++ L E L+R++ V E Sbjct: 36 KAINKELKHKQPLVVKFKEFK-RLIDQALEAEAILENNELKELHDEAKKELERVRSVVPE 94 Query: 101 YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 Y++ LL D N+ +E+ AGG ES + L MY + + +K + E+ Sbjct: 95 YEEALKLLLLPIDENNQKNVIVELRPAAGGDESCIFLADLFNMYRNFCSNKGWKLQINEM 154 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 G+ + + G + + LK E GVHR+ R+ +S R HTS ++ V P ++ Sbjct: 155 IPSS-VGLNFVSFEVNGVDVFAKLKFESGVHRVQRVPATESKGRVHTSTVTVAVLPQLE- 212 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 ++E+ I+ +D R+DTYRASGAGGQHVN T+SAVRITH+PTG+VV CQ+ +SQ N+ A Sbjct: 213 AVEVHINPADLRVDTYRASGAGGQHVNRTESAVRITHLPTGIVVSCQEGKSQFTNRDTAM 272 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334 MLRAKL+ E + E+++ K+++G G +IR+Y P V D R + Sbjct: 273 KMLRAKLW--EKAQNEQLSTQAGLRKSQVGSGDRAEKIRTYNY-PQNRVTDHRIKLTVNK 329 Query: 335 PSDVLDGDLDDFMKATLAIKK 355 + ++ GDLD+ ++A A +K Sbjct: 330 LNTIILGDLDEIIEALQADEK 350 >gi|270308380|ref|YP_003330438.1| peptide chain release factor 1 [Dehalococcoides sp. VS] gi|270154272|gb|ACZ62110.1| peptide chain release factor 1 [Dehalococcoides sp. VS] Length = 355 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 113/345 (32%), Positives = 187/345 (54%), Gaps = 14/345 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72 +N +R + + P + + + L +ER L + K + L + L Sbjct: 5 LENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAMSKELEEAKNL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAGGTES 130 LE+ +ED +++ +NL++ + Y+Q E L D +E+ AG GG E+ Sbjct: 65 LEIEKDEDMRDMVRGEIENLEKSMANL-YEQMTLELLPKDPNDDKSIIMEIRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L +MYTR+A + +KTE ++I+ IK + G A+ LK E+GVHR+ Sbjct: 124 GLFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P ++ ++I+I+ D R+D + +SGAGGQ+V +A+ Sbjct: 184 QRVPQTEASGRIHTSTATVAVLPQAEE-VDIDINMDDVRVDIFHSSGAGGQNVQKVATAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+THIPTG+VV CQ ERSQ KNK +A+ +LRA+L ELE K +E ES + ++G Sbjct: 243 RLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDE--ERTESRRAQVGQAD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R + + +L+G LD+ + TLA Sbjct: 301 RSEKIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIID-TLA 343 >gi|15827565|ref|NP_301828.1| peptide chain release factor 1 [Mycobacterium leprae TN] gi|221230042|ref|YP_002503458.1| peptide chain release factor 1 [Mycobacterium leprae Br4923] gi|13432207|sp|P45833|RF1_MYCLE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790892|sp|B8ZR31|RF1_MYCLB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|13093115|emb|CAC31515.1| peptide chain release factor 1 [Mycobacterium leprae] gi|219933149|emb|CAR71229.1| peptide chain release factor 1 [Mycobacterium leprae Br4923] Length = 361 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 104/253 (41%), Positives = 139/253 (54%), Gaps = 15/253 (5%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 +D LEV +G GG ES +A L RMY R+AE+ + L+ + G K ATL I Sbjct: 105 DDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISH 164 Query: 175 PNA---------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 A + +K E GVHR+ R+ +S R HTS + + VYP ++ E+ I E Sbjct: 165 KGASDGDAVDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDE 224 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RID YR+SG GGQ VNTTDSAVRITH+PTGVVV CQ ERSQ +NK +A +L A+L Sbjct: 225 SDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQ 284 Query: 286 ELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + + + +AN ++I +IR+Y P + D R + + VLDGD Sbjct: 285 --AMAEEQALANASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKAHNLDQVLDGD 341 Query: 343 LDDFMKATLAIKK 355 LD A A K Sbjct: 342 LDALFDALSAADK 354 >gi|119484803|ref|ZP_01619285.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106] gi|119457621|gb|EAW38745.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106] Length = 368 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 113/343 (32%), Positives = 191/343 (55%), Gaps = 21/343 (6%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELAL 77 Q + L + DP + N E + + +ER ++ N K Q+ L + + A Sbjct: 15 QTFNELTLRLADPDVSNNPTELQRIAKERSSIEEVVNTYQLWKTAQEELTGARQVQKEAG 74 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFES------LLSGEADSNDAYLEVHAGAGGTESQ 131 E+ + ++E + L+ +L+ + +Q E+ L S D + LE+ AG GG E+ Sbjct: 75 EDPE---MKEMA-ALEVEELQNQLEQLETHLKVLLLPSDPNDDKNIMLEIRAGTGGDEAS 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 WA L+RMY+R+AE +K++ + + + G K A L IKG Y LK E GVHR+ Sbjct: 131 IWAGDLVRMYSRYAEGQKWQVKIVSESSADMGGFKEAILEIKGDQVYSKLKFEAGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P VD+ +++EI D + T R+ GAGGQ+VN ++AV Sbjct: 191 RVPLTEAGGRVHTSTATVAVMPEVDE-VDVEIDPKDIEMSTARSGGAGGQNVNKVETAVD 249 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++L++++E + ++++G G Sbjct: 250 LIHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEA--VTSMRRSQVGTGAR 307 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y + + V D R + S S VL+G +DD + A + Sbjct: 308 SEKIRTYNYKDNR-VTDHRLG-QNFSLSPVLEGGMDDVVDACV 348 >gi|326436517|gb|EGD82087.1| peptide chain release factor 2 [Salpingoeca sp. ATCC 50818] Length = 449 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/250 (39%), Positives = 147/250 (58%), Gaps = 14/250 (5%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH----DGEEAGIK 166 +AD A +E+ AG GGTE+ +A L ++Y A +R ++ + + G + G+K Sbjct: 180 DADDGSAIVEIRAGTGGTEAAIFAKDLYKLYQHLAVRRGWRVQEMTTSYTEGVGSDDGLK 239 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 T + G +A+G LK E GVHR+ R+ ++ R HTS +++ V P + + + I E Sbjct: 240 EVTFSVNGQDAFGSLKFESGVHRVQRVPITEAAGRIHTSTATVAVLPQASE-VTVSIHER 298 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D ++DTYR+ GAGGQHVNTTDSAVR+THIPTG+VV Q ERSQH+N+ A M+RA++Y+ Sbjct: 299 DIKMDTYRSGGAGGQHVNTTDSAVRLTHIPTGIVVAVQSERSQHRNRDVAMKMIRARVYQ 358 Query: 287 LELQKREEIANIGESSKTEIGW-----GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 E +K + E + IG +IR+Y P V D R N+ + S S VL+ Sbjct: 359 QEREKAQ--LERAEQRRALIGGTPGSRSDRIRTYNF-PQDRVTDHRVNV-RASLSSVLED 414 Query: 342 DLDDFMKATL 351 D D + ++L Sbjct: 415 DGLDGIISSL 424 >gi|301633339|gb|ADK86893.1| peptide chain release factor 1 [Mycoplasma pneumoniae FH] Length = 359 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 112/321 (34%), Positives = 176/321 (54%), Gaps = 14/321 (4%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ-ETSDNLQRIKLEV-E 100 K + +E +H + KE + RL D + E LE ++ L E L+R++ V E Sbjct: 36 KAINKELKHKQPLVVKFKEFK-RLIDQALEAEAILENNELKELHDEAKKELERVRSVVPE 94 Query: 101 YKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 Y++ LL D N+ +E+ AGG ES + L MY + + +K + E+ Sbjct: 95 YEEALKLLLLPIDENNQKNVIVELRPAAGGDESCIFLADLFNMYRNFCTNKGWKLQINEM 154 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 G+ + + G + + LK E GVHR+ R+ +S R HTS ++ V P ++ Sbjct: 155 IPSS-VGLNFVSFEVNGVDVFAKLKFESGVHRVQRVPATESKGRVHTSTVTVAVLPQLE- 212 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 ++E+ I+ +D R+DTYRASGAGGQHVN T+SAVRITH+PTG+VV CQ+ +SQ N+ A Sbjct: 213 AVEVHINPADLRVDTYRASGAGGQHVNRTESAVRITHLPTGIVVSCQEGKSQFTNRDTAM 272 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334 MLRAKL+ E + E+++ K+++G G +IR+Y P V D R + Sbjct: 273 KMLRAKLW--EKAQNEQLSTQAGLRKSQVGSGDRAEKIRTYNY-PQNRVTDHRIKLTVNK 329 Query: 335 PSDVLDGDLDDFMKATLAIKK 355 + ++ GDLD+ ++A A +K Sbjct: 330 LNTIILGDLDEIIEALQADEK 350 >gi|699334|gb|AAA63095.1| prfA [Mycobacterium leprae] Length = 357 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 104/253 (41%), Positives = 139/253 (54%), Gaps = 15/253 (5%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 +D LEV +G GG ES +A L RMY R+AE+ + L+ + G K ATL I Sbjct: 101 DDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISH 160 Query: 175 PNA---------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 A + +K E GVHR+ R+ +S R HTS + + VYP ++ E+ I E Sbjct: 161 KGASDGDAVDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDE 220 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RID YR+SG GGQ VNTTDSAVRITH+PTGVVV CQ ERSQ +NK +A +L A+L Sbjct: 221 SDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQ 280 Query: 286 ELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + + + +AN ++I +IR+Y P + D R + + VLDGD Sbjct: 281 --AMAEEQALANASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKAHNLDQVLDGD 337 Query: 343 LDDFMKATLAIKK 355 LD A A K Sbjct: 338 LDALFDALSAADK 350 >gi|240169515|ref|ZP_04748174.1| peptide chain release factor 1 [Mycobacterium kansasii ATCC 12478] Length = 357 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 140/235 (59%), Gaps = 7/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D++D LEV +G GG ES +A L RMY R+AE+R + L+ + G K ATL I Sbjct: 103 DADDIVLEVKSGEGGEESALFAADLARMYIRYAERRGWTVTVLDETTSDLGGYKDATLAI 162 Query: 173 --KGPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 KG + G W +K E GVHR+ R+ +S R HTS + + VYP ++ E++I ESD Sbjct: 163 ASKGDSVDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESD 222 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A +L A+L + Sbjct: 223 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQSM 282 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 ++ A+ +S+ + +IR+Y P + D R + + VLDG Sbjct: 283 AEEQALADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKAYNLDQVLDG 336 >gi|332829242|gb|EGK01896.1| peptide chain release factor 1 [Dysgonomonas gadei ATCC BAA-286] Length = 361 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 90/238 (37%), Positives = 139/238 (58%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A +E+ G GG E+ +A L RMY ++ E + ++TE + +G G K + Sbjct: 111 DSKNAIVEIRGGTGGDEAAIFAGDLYRMYIKYCELKGWRTEITSLTEGTSGGYKEVIFTV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +++ V P ++ +++EI+ +D + T Sbjct: 171 TGEGVYGILKYESGVHRVQRVPATETQGRVHTSAATVAVLPEAEE-VDVEINPADIEMQT 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SGAGGQ+VN ++ V++TH P+G+VV CQQ RSQ N+ A MLR KLY++EL K Sbjct: 230 ARSSGAGGQNVNKVETKVQLTHKPSGLVVVCQQARSQLANRELAMQMLRTKLYDIELSKY 289 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + A I KT + G +IR+Y P V D R N+ + S V+DG++ + Sbjct: 290 Q--AEIASKRKTMVSTGDRSAKIRTYNY-PQGRVTDHRINLTLYNLSGVMDGEIQPII 344 >gi|300770142|ref|ZP_07080021.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum ATCC 33861] gi|300762618|gb|EFK59435.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum ATCC 33861] Length = 364 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 90/240 (37%), Positives = 141/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +E+ G GG E+ +A L RMYTR+ E + ++ E +++ +G G K L + Sbjct: 113 DAKNAIIEIRGGTGGDEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKV 172 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS +S+ V P +D +++E++ D + T Sbjct: 173 IGEDVYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAED-VDVELNPGDIEMQT 231 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++ V++TH P+G+VV CQ ERSQ N+ A MLR KLYELE+QK+ Sbjct: 232 SRSGGAGGQNVNKVETKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKK 291 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +I KT + G ++R+Y P V + R + + V+DGD+ + A Sbjct: 292 H--GDIAAKRKTMVSTGDRSAKVRTYNY-PQGRVTEHRIGLTLYNLPAVMDGDIQGIIDA 348 >gi|149409336|ref|XP_001510216.1| PREDICTED: similar to low density lipoprotein receptor-related protein 10 [Ornithorhynchus anatinus] Length = 380 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 130/215 (60%), Gaps = 6/215 (2%) Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 F + S EAD ND LE+ AG GG E+ + + MY ++A +K+ E LE E Sbjct: 116 FLLIPSEEADENDLILELTAGIGGQEAMLFTAEMFDMYEQYAAYKKWHFETLEYFPSEIG 175 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G++ AT I G AY LK E GVHR+ R+ + R HTS ++ V P + I + I Sbjct: 176 GLRHATASIGGHEAYKHLKFEGGVHRVQRVPKTERQGRTHTSTMTVAVLPQPTE-INLVI 234 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 D RI+T RASGAGGQHVNTTDSAVRI H+PTG+ +CQQERSQ KN+ A LRAK Sbjct: 235 HPKDLRIETKRASGAGGQHVNTTDSAVRIVHVPTGIASECQQERSQLKNREMAMKKLRAK 294 Query: 284 LYELELQKREEIANIGESSKTEIGW-GR--QIRSY 315 LY ++L+ EE + + K +IG GR +IR+Y Sbjct: 295 LYSIQLE--EETSKRYSARKIQIGTKGRSEKIRTY 327 >gi|91201018|emb|CAJ74075.1| strongly similar to class I peptide chain release factor [Candidatus Kuenenia stuttgartiensis] Length = 360 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 92/233 (39%), Positives = 146/233 (62%), Gaps = 7/233 (3%) Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ AG GG E+ +A L RMY ++AE + +KTE + ++ + G K T I+G N Y Sbjct: 115 EIRAGTGGEEAAIFAADLFRMYIKYAESQNWKTELFDYNETDLGGFKEVTFSIEGRNVYQ 174 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L+ E G HR+ R+ +++ R HTS +++ + P V++ +EI+I+ +D I+T+RASG G Sbjct: 175 KLRFESGTHRVQRVPQTEASGRVHTSTATVAILPEVEE-VEIDINPADILIETFRASGPG 233 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VN T SAVRITHI TG+VV+C E+SQHKNKA+A +LR++L+E ++++ ++ Sbjct: 234 GQKVNKTSSAVRITHISTGIVVKCLDEKSQHKNKAKAMRILRSRLHE-SIEEKNQLER-D 291 Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + +IG G +IR+Y + V D R N + V+ G LD+ + A Sbjct: 292 QVRRIQIGTGDRSEKIRTYNYSQNR-VTDHRINFSVYNLEHVMLGYLDEIIAA 343 >gi|159475365|ref|XP_001695789.1| peptide chain release factor [Chlamydomonas reinhardtii] gi|158275349|gb|EDP01126.1| peptide chain release factor [Chlamydomonas reinhardtii] Length = 383 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 94/244 (38%), Positives = 150/244 (61%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGAGG E+ WA L+RMY R+A K+ +K + E G K L I Sbjct: 130 DDRNIMLEIRAGAGGDEASIWAGDLMRMYQRYANKQGWKASLVSCTQAEAGGYKEIILQI 189 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E GVHR+ R+ ++ R HTS +++ V P V++ +++ ++ +D + Sbjct: 190 NGDSVYSKLKWEAGVHRVQRVPATEAAGRVHTSTATVAVMPEVEE-VDVALNMNDIDLKF 248 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQ+VN ++AV + H PTG+ V CQ+ER+Q +NK +A+ +LRAKLYELELQ++ Sbjct: 249 ARASGAGGQNVNKVETAVDLMHKPTGIRVFCQEERTQAQNKERAFQILRAKLYELELQRQ 308 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP----SDVLDGDLDDFMK 348 + A I + K+++G G RS ++ Y KD R + + + +++GDL+D ++ Sbjct: 309 Q--AEIYAARKSQVGTGD--RSEKIKTYNY-KDSRVSDHRIKMNFDLNSIIEGDLEDTLQ 363 Query: 349 ATLA 352 A ++ Sbjct: 364 AMIS 367 >gi|116671165|ref|YP_832098.1| peptide chain release factor 1 [Arthrobacter sp. FB24] gi|166223528|sp|A0JY78|RF1_ARTS2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116611274|gb|ABK03998.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter sp. FB24] Length = 357 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 97/248 (39%), Positives = 145/248 (58%), Gaps = 12/248 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + LEV G GG E+ +A LLRMY+R+AE R +KTE + + + G K + + Sbjct: 100 DARNVILEVKGGEGGDEAALFAADLLRMYSRYAESRGWKTELISATESDLGGYKDVQMAV 159 Query: 173 KG------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG Y LK E GVHR+ R+ +S R HTS + + V P VD+ E+EI+++ Sbjct: 160 KGNSNDPAEGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQN 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ +LRA++ Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARI-- 277 Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L Q+ + A K++I +IR+Y P + D RT + + V++GDL Sbjct: 278 LAHQQEQIDAENSAQRKSQIRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDL 336 Query: 344 DDFMKATL 351 + +++ + Sbjct: 337 EPVIQSAI 344 >gi|257421856|ref|ZP_05598846.1| peptide chain release factor [Enterococcus faecalis X98] gi|257163680|gb|EEU93640.1| peptide chain release factor [Enterococcus faecalis X98] gi|315155439|gb|EFT99455.1| peptide chain release factor 1 [Enterococcus faecalis TX0043] Length = 357 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 93/240 (38%), Positives = 141/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L MY ++AE + +K E LE + G K ++I Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N + LK E G HR+ R+ +S R HTS +++ V P ++ +EIE+++ D R+D Sbjct: 166 SGDNVFSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIELADKDIRVDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQHVN T SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++Q+ Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD-QIQQ- 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + K+ +G G +IR+Y P V D R + +L G LD+ + A Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDA 341 >gi|138896954|ref|YP_001127407.1| peptide chain release factor 1 [Geobacillus thermodenitrificans NG80-2] gi|196249772|ref|ZP_03148468.1| peptide chain release factor 1 [Geobacillus sp. G11MC16] gi|166223561|sp|A4ITK8|RF1_GEOTN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|134268467|gb|ABO68662.1| Peptide chain release factor 1 [Geobacillus thermodenitrificans NG80-2] gi|196210648|gb|EDY05411.1| peptide chain release factor 1 [Geobacillus sp. G11MC16] Length = 358 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 101/242 (41%), Positives = 143/242 (59%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ A AGG E+ +A L RMYTR+AE + +KTE +E G K ++ Sbjct: 106 DEKNVIMEIRAAAGGEEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS +++ P +++ +E+EI E D R+DT Sbjct: 166 NGKGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVACLPEMEE-VEVEIHEKDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y +SG GGQ VNTT SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ Q Sbjct: 225 YASSGPGGQSVNTTMSAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKYQQ-- 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A ++ K +G G +IR+Y P V D R + VLDG LD+ ++A Sbjct: 283 EARAEYDQTRKQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDLVLDGQLDEIIEA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|257870909|ref|ZP_05650562.1| peptide chain release factor 1 [Enterococcus gallinarum EG2] gi|257805073|gb|EEV33895.1| peptide chain release factor 1 [Enterococcus gallinarum EG2] Length = 357 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 109/302 (36%), Positives = 170/302 (56%), Gaps = 19/302 (6%) Query: 56 ISFIKEIQDRLCDNLI--LLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEA 112 + IK+ ++ L +NL + E+A EE S L++ D L+ RIK+ + L Sbjct: 55 VEGIKDTEELLGENLDAEMAEMAKEE--LSDLKKEKDVLEDRIKILL-------LPKDPN 105 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L MY ++AE + +K E ++ + G K ++I Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAETQGWKVEVMDANVTGIGGYKEVIMMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y LK E G HR+ R+ +S R HTS +++ V P ++ +EI+I++ D R D Sbjct: 166 SGENVYSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIDIADKDIRTDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQHVN T SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++Q+ Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD-QIQQ- 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + K+ +G G +IR+Y P V D R + +L G LD+ + A Sbjct: 283 EARSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|229545076|ref|ZP_04433801.1| peptide chain release factor 1 [Enterococcus faecalis TX1322] gi|307287617|ref|ZP_07567660.1| peptide chain release factor 1 [Enterococcus faecalis TX0109] gi|229309968|gb|EEN75955.1| peptide chain release factor 1 [Enterococcus faecalis TX1322] gi|306501355|gb|EFM70658.1| peptide chain release factor 1 [Enterococcus faecalis TX0109] gi|315165014|gb|EFU09031.1| peptide chain release factor 1 [Enterococcus faecalis TX1302] Length = 357 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 93/240 (38%), Positives = 141/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L MY ++AE + +K E LE + G K ++I Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAEAQGWKVEVLEANVTGIGGYKEVIMMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N + LK E G HR+ R+ +S R HTS +++ V P ++ +EIE+++ D R+D Sbjct: 166 SGDNVFSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIELADKDIRVDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQHVN T SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++Q+ Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD-QIQQ- 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + K+ +G G +IR+Y P V D R + +L G LD+ + A Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDA 341 >gi|256830555|ref|YP_003159283.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM 4028] gi|256579731|gb|ACU90867.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM 4028] Length = 353 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 90/238 (37%), Positives = 139/238 (58%), Gaps = 7/238 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ + + RMY+R+AE ++ E L D G K + Sbjct: 105 DEKNIILEIRAGTGGEEAALFVADIFRMYSRYAELHSWRVEVLSSSDTGTGGFKEIIASV 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y LK E G HR+ R+ +S R HTS ++ + P ++ ++++I +D R+D Sbjct: 165 SGTNVYSKLKYESGAHRVQRVPATESQGRIHTSAITVAILPEAEE-VDVKIDPNDIRVDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSA+RITH+ TG+VV CQ E+SQHKNKA+A +LR++L L+ + Sbjct: 224 FRSSGPGGQSVNTTDSAIRITHLATGLVVICQDEKSQHKNKAKALKVLRSRL--LQAAQD 281 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E ++ K+++G G +IR+Y P V D R N+ + ++G +DD + Sbjct: 282 ETKKAYDDNRKSQVGSGDRSERIRTYNY-PQGRVTDHRINLTLYNLDQAMEGHIDDII 338 >gi|310644400|ref|YP_003949159.1| peptide chain release factor 1 [Paenibacillus polymyxa SC2] gi|309249351|gb|ADO58918.1| Peptide chain release factor 1 [Paenibacillus polymyxa SC2] Length = 355 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 143/240 (59%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L RMYTR+A+ + ++ E ++ + + G K +I Sbjct: 106 DDKNVIIEIRGAAGGDEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E G HR+ RI +S R HTS S++ V P ++ ++IEI + D R+DT Sbjct: 166 NGRGAYSKMKFESGAHRVQRIPTTESGGRIHTSTSTVSVMPEAEE-VDIEILDKDIRVDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+TH+PTG+V CQ +SQ+ NK +A +LRA++ ++ ++ Sbjct: 225 FCSSGAGGQSVNTTKSAVRVTHMPTGIVATCQDGKSQNSNKEKALQVLRARIS--DMMRQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE A K+++G G +IR+Y P V D R + V++G++++ + A Sbjct: 283 EEEAKYAGERKSKVGTGDRSERIRTYNF-PQSRVTDHRIGLTMHKLDQVMNGEIEEIVSA 341 >gi|220906439|ref|YP_002481750.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425] gi|254790876|sp|B8HXV0|RF1_CYAP4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219863050|gb|ACL43389.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425] Length = 364 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 112/336 (33%), Positives = 188/336 (55%), Gaps = 35/336 (10%) Query: 32 DPHLWQNVIEAKMLMRE-----------RQHLDNAISFIKEIQDRLCDNLILLELALEED 80 DP +Q V +A+ + E +QHL A ++I + L E+A++E Sbjct: 32 DPEEFQRVAKARASLEETVDTYDTWKTVQQHLAEA----RQIAREAASDPELQEMAVQE- 86 Query: 81 DCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + L E S +L QR+K+ + L D + LE+ AG GG E+ WA L+R Sbjct: 87 -VNELTEKSAHLEQRLKILL-------LPRDPNDDKNIMLEIRAGTGGDEASIWAGDLVR 138 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 +Y+R+AE ++++ + + GE G K A L I+G Y LK E GVHR+ R+ +++ Sbjct: 139 LYSRYAESQRWRVKLVSESLGEMGGFKEAILEIQGEQVYSKLKYEAGVHRVQRVPATEAS 198 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ + P VD+ +E++I D + T R+ GAGGQ+VN ++AV + H PTG+ Sbjct: 199 GRVHTSTATVAIMPEVDE-VEVKIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGI 257 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 + C +ERSQ +NK +A +LRAKLYE++LQ E+ + I ++++G G +IR+Y Sbjct: 258 RIFCTEERSQLQNKERAMQILRAKLYEMKLQ--EQQSEITSRRRSQVGTGSRSEKIRTY- 314 Query: 317 LQPYQMVKDLRTNIEKTSP-SDVLDGDLDDFMKATL 351 Y+ + + + P + VL+GD++ ++A + Sbjct: 315 --NYKDNRATDHRLGQNFPLNQVLEGDIEGIIQACI 348 >gi|29377042|ref|NP_816196.1| peptide chain release factor 1 [Enterococcus faecalis V583] gi|227519760|ref|ZP_03949809.1| peptide chain release factor 1 [Enterococcus faecalis TX0104] gi|227554052|ref|ZP_03984099.1| peptide chain release factor 1 [Enterococcus faecalis HH22] gi|229549320|ref|ZP_04438045.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200] gi|255972029|ref|ZP_05422615.1| peptide chain release factor 1 [Enterococcus faecalis T1] gi|255975086|ref|ZP_05425672.1| peptide chain release factor 1 [Enterococcus faecalis T2] gi|256616929|ref|ZP_05473775.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200] gi|256763197|ref|ZP_05503777.1| peptide chain release factor 1 [Enterococcus faecalis T3] gi|256853870|ref|ZP_05559235.1| peptide chain release factor 1 [Enterococcus faecalis T8] gi|256957798|ref|ZP_05561969.1| peptide chain release factor 1 [Enterococcus faecalis DS5] gi|256961203|ref|ZP_05565374.1| peptide chain release factor 1 [Enterococcus faecalis Merz96] gi|256963678|ref|ZP_05567849.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704] gi|257079736|ref|ZP_05574097.1| peptide chain release factor 1 [Enterococcus faecalis JH1] gi|257081918|ref|ZP_05576279.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol] gi|257084460|ref|ZP_05578821.1| peptide chain release factor 1 [Enterococcus faecalis Fly1] gi|257087541|ref|ZP_05581902.1| peptide chain release factor 1 [Enterococcus faecalis D6] gi|257090700|ref|ZP_05585061.1| peptide chain release factor 1 [Enterococcus faecalis CH188] gi|257416748|ref|ZP_05593742.1| peptide chain release factor 1 [Enterococcus faecalis AR01/DG] gi|257419965|ref|ZP_05596959.1| peptide chain release factor [Enterococcus faecalis T11] gi|293384152|ref|ZP_06630046.1| peptide chain release factor 1 [Enterococcus faecalis R712] gi|293386966|ref|ZP_06631535.1| peptide chain release factor 1 [Enterococcus faecalis S613] gi|294779688|ref|ZP_06745078.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1] gi|300861212|ref|ZP_07107299.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11] gi|307270729|ref|ZP_07552020.1| peptide chain release factor 1 [Enterococcus faecalis TX4248] gi|307271624|ref|ZP_07552895.1| peptide chain release factor 1 [Enterococcus faecalis TX0855] gi|307276806|ref|ZP_07557917.1| peptide chain release factor 1 [Enterococcus faecalis TX2134] gi|307285597|ref|ZP_07565736.1| peptide chain release factor 1 [Enterococcus faecalis TX0860] gi|307290429|ref|ZP_07570344.1| peptide chain release factor 1 [Enterococcus faecalis TX0411] gi|312899933|ref|ZP_07759251.1| peptide chain release factor 1 [Enterococcus faecalis TX0470] gi|312905241|ref|ZP_07764361.1| peptide chain release factor 1 [Enterococcus faecalis TX0635] gi|312907897|ref|ZP_07766880.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512] gi|312953588|ref|ZP_07772425.1| peptide chain release factor 1 [Enterococcus faecalis TX0102] gi|312978574|ref|ZP_07790312.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516] gi|46576782|sp|Q831F6|RF1_ENTFA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|29344508|gb|AAO82266.1| peptide chain release factor 1 [Enterococcus faecalis V583] gi|227072848|gb|EEI10811.1| peptide chain release factor 1 [Enterococcus faecalis TX0104] gi|227176800|gb|EEI57772.1| peptide chain release factor 1 [Enterococcus faecalis HH22] gi|229305557|gb|EEN71553.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200] gi|255963047|gb|EET95523.1| peptide chain release factor 1 [Enterococcus faecalis T1] gi|255967958|gb|EET98580.1| peptide chain release factor 1 [Enterococcus faecalis T2] gi|256596456|gb|EEU15632.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200] gi|256684448|gb|EEU24143.1| peptide chain release factor 1 [Enterococcus faecalis T3] gi|256710813|gb|EEU25856.1| peptide chain release factor 1 [Enterococcus faecalis T8] gi|256948294|gb|EEU64926.1| peptide chain release factor 1 [Enterococcus faecalis DS5] gi|256951699|gb|EEU68331.1| peptide chain release factor 1 [Enterococcus faecalis Merz96] gi|256954174|gb|EEU70806.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704] gi|256987766|gb|EEU75068.1| peptide chain release factor 1 [Enterococcus faecalis JH1] gi|256989948|gb|EEU77250.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol] gi|256992490|gb|EEU79792.1| peptide chain release factor 1 [Enterococcus faecalis Fly1] gi|256995571|gb|EEU82873.1| peptide chain release factor 1 [Enterococcus faecalis D6] gi|256999512|gb|EEU86032.1| peptide chain release factor 1 [Enterococcus faecalis CH188] gi|257158576|gb|EEU88536.1| peptide chain release factor 1 [Enterococcus faecalis ARO1/DG] gi|257161793|gb|EEU91753.1| peptide chain release factor [Enterococcus faecalis T11] gi|291078632|gb|EFE15996.1| peptide chain release factor 1 [Enterococcus faecalis R712] gi|291083636|gb|EFE20599.1| peptide chain release factor 1 [Enterococcus faecalis S613] gi|294453242|gb|EFG21654.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1] gi|295113546|emb|CBL32183.1| bacterial peptide chain release factor 1 (bRF-1) [Enterococcus sp. 7L76] gi|300850251|gb|EFK78001.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11] gi|306498622|gb|EFM68124.1| peptide chain release factor 1 [Enterococcus faecalis TX0411] gi|306502821|gb|EFM72086.1| peptide chain release factor 1 [Enterococcus faecalis TX0860] gi|306506443|gb|EFM75602.1| peptide chain release factor 1 [Enterococcus faecalis TX2134] gi|306511502|gb|EFM80501.1| peptide chain release factor 1 [Enterococcus faecalis TX0855] gi|306513039|gb|EFM81680.1| peptide chain release factor 1 [Enterococcus faecalis TX4248] gi|310625988|gb|EFQ09271.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512] gi|310628426|gb|EFQ11709.1| peptide chain release factor 1 [Enterococcus faecalis TX0102] gi|310631478|gb|EFQ14761.1| peptide chain release factor 1 [Enterococcus faecalis TX0635] gi|311288723|gb|EFQ67279.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516] gi|311292929|gb|EFQ71485.1| peptide chain release factor 1 [Enterococcus faecalis TX0470] gi|315025302|gb|EFT37234.1| peptide chain release factor 1 [Enterococcus faecalis TX2137] gi|315030387|gb|EFT42319.1| peptide chain release factor 1 [Enterococcus faecalis TX4000] gi|315032691|gb|EFT44623.1| peptide chain release factor 1 [Enterococcus faecalis TX0017] gi|315035852|gb|EFT47784.1| peptide chain release factor 1 [Enterococcus faecalis TX0027] gi|315143714|gb|EFT87730.1| peptide chain release factor 1 [Enterococcus faecalis TX2141] gi|315148532|gb|EFT92548.1| peptide chain release factor 1 [Enterococcus faecalis TX4244] gi|315150059|gb|EFT94075.1| peptide chain release factor 1 [Enterococcus faecalis TX0012] gi|315151855|gb|EFT95871.1| peptide chain release factor 1 [Enterococcus faecalis TX0031] gi|315159264|gb|EFU03281.1| peptide chain release factor 1 [Enterococcus faecalis TX0312] gi|315161810|gb|EFU05827.1| peptide chain release factor 1 [Enterococcus faecalis TX0645] gi|315168548|gb|EFU12565.1| peptide chain release factor 1 [Enterococcus faecalis TX1341] gi|315170191|gb|EFU14208.1| peptide chain release factor 1 [Enterococcus faecalis TX1342] gi|315172490|gb|EFU16507.1| peptide chain release factor 1 [Enterococcus faecalis TX1346] gi|315574712|gb|EFU86903.1| peptide chain release factor 1 [Enterococcus faecalis TX0309B] gi|315579264|gb|EFU91455.1| peptide chain release factor 1 [Enterococcus faecalis TX0630] gi|315580976|gb|EFU93167.1| peptide chain release factor 1 [Enterococcus faecalis TX0309A] gi|323481494|gb|ADX80933.1| peptide chain release factor 1 [Enterococcus faecalis 62] gi|327535788|gb|AEA94622.1| peptide chain release factor RF1 [Enterococcus faecalis OG1RF] gi|329578086|gb|EGG59499.1| peptide chain release factor 1 [Enterococcus faecalis TX1467] Length = 357 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 93/240 (38%), Positives = 141/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L MY ++AE + +K E LE + G K ++I Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N + LK E G HR+ R+ +S R HTS +++ V P ++ +EIE+++ D R+D Sbjct: 166 SGDNVFSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIELADKDIRVDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQHVN T SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++Q+ Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD-QIQQ- 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + K+ +G G +IR+Y P V D R + +L G LD+ + A Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDA 341 >gi|86132255|ref|ZP_01050850.1| peptide chain release factor 1 [Dokdonia donghaensis MED134] gi|85817174|gb|EAQ38357.1| peptide chain release factor 1 [Dokdonia donghaensis MED134] Length = 359 Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 88/238 (36%), Positives = 142/238 (59%), Gaps = 4/238 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLL 171 D+ + +E+ AG GG E+ +A L RMYT++ + +K ++ +G G K Sbjct: 106 DAKNVVVEIRAGTGGDEASIFAGDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFE 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + YG +K E GVHR+ R+ ++ R HTS +++ V P ++ +++I D R+D Sbjct: 166 ITGQDVYGTMKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVQIEPKDVRVD 224 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 + +SG GGQ VNTT SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K Sbjct: 225 FFCSSGPGGQSVNTTYSAVRLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAK 284 Query: 292 REEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 ++E +S+ G +IR+Y P V D R + ++++GD+ ++ Sbjct: 285 KQEEDAAKRNSQVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKILE 341 >gi|332663960|ref|YP_004446748.1| peptide chain release factor 1 [Haliscomenobacter hydrossis DSM 1100] gi|332332774|gb|AEE49875.1| Peptide chain release factor 1 [Haliscomenobacter hydrossis DSM 1100] Length = 358 Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 95/240 (39%), Positives = 137/240 (57%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS D E+ +G GG E+ +A L RMYTR+ E + +K A+EI++G G L I Sbjct: 105 DSRDVIFEIRSGTGGDEASLFAGDLYRMYTRYFESKGWKVSAMEINEGSVGGYNKLVLEI 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E G HR+ R+ +S R HTS +++ V P ++ ++EI + D + DT Sbjct: 165 NGEDVYGTLKFESGAHRVQRVPKTESQGRVHTSAATVVVMPKLEME-DLEIRKEDLKTDT 223 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SGAGGQHVN T+S VR TH+PTGVV + RSQ +N+ A L K+YE+ Q Sbjct: 224 FRSSGAGGQHVNKTESGVRFTHLPTGVVSESTDGRSQIQNREIALQRLYQKIYEMRRQAH 283 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + K+ +G G +IR+Y P V D R N+ S VL+GDL+ ++ Sbjct: 284 E--SEQAAKRKSLVGSGDRSDKIRTYNF-PQNRVTDHRINLTIYSLDKVLEGDLEAIIEG 340 >gi|13357561|ref|NP_077833.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762199|ref|YP_001752083.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920085|ref|ZP_02690833.2| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508605|ref|ZP_02689678.2| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701604|ref|ZP_02553446.2| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|13124459|sp|Q9PRE0|RF1_UREPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039997|sp|B1AHY9|RF1_UREP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|11277784|pir||D82945 translation releasing factor RF-1 UU003 [imported] - Ureaplasma urealyticum gi|6898949|gb|AAF30410.1|AE002100_3 peptide chain release factor 1 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827776|gb|ACA33038.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902439|gb|EDT48728.1| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182676062|gb|EDT87967.1| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700834|gb|EDU19116.1| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 359 Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 113/316 (35%), Positives = 169/316 (53%), Gaps = 22/316 (6%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVE 100 A+ + +Q LD I+ K + +L L+ELA ++ D+ I +N +I L Sbjct: 49 AEAFAKYKQKLDTGIAAEKILNTE--KDLELIELAQMDLDEAKINIPIIENDLKIML--- 103 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 L + D + +E+ AGG ES + L Y +AE +K + +E+ Sbjct: 104 ------LPTDPNDDKNVIVEMRPAAGGDESSIFVGNLFDTYRAYAENNNWKMKIIEMTPN 157 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 G + +I G Y +K E GVHR+ R+ +S R HTS ++ V P D ++ Sbjct: 158 A-VGFSFISFMISGEEVYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLPE-QDEVD 215 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + I+ ++ RIDTYRASGAGGQHVN T+SAVRITHIPTGVV CQ+ +SQ +N+ A ML Sbjct: 216 VVINPTELRIDTYRASGAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKML 275 Query: 281 RAKLYE-LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336 RAKL+E + Q+ E AN+ K ++G G +IR+Y P V D R N+ Sbjct: 276 RAKLWEAAQEQQNAEFANL---RKNQVGTGDRSEKIRTYNY-PQNRVTDHRINLTLNKLD 331 Query: 337 DVLDGDLDDFMKATLA 352 ++ G+LD+ + A +A Sbjct: 332 QIMMGELDEIIDALIA 347 >gi|325956455|ref|YP_004291867.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC] gi|325333020|gb|ADZ06928.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC] Length = 362 Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 99/283 (34%), Positives = 157/283 (55%), Gaps = 15/283 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+E+A EE+ I +E + +IK+ + L D D +E+H AGG E+ Sbjct: 76 LIEMAKEEN-SEIEKEIPELEDQIKILM-------LPKDPNDDKDIIMEIHGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + V++G+LD+ + A + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALI 346 >gi|205375314|ref|ZP_03228104.1| peptide chain release factor 1 [Bacillus coahuilensis m4-4] Length = 356 Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 119/355 (33%), Positives = 182/355 (51%), Gaps = 28/355 (7%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +FD AV+ R LN DP + + + + +E+ + +E +D + D Sbjct: 1 MFDRLQAVEDRYDKLNELLSDPEVVSDPKKLREYSKEQSGHQATVEAYREYKDAKEQYND 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL------LSGEADSND---AYL 119 +LE L+ + +++E L+ +Q ESL L D ND + Sbjct: 61 AKQMLEDKLDPEMREMVKEEISELE--------EQIESLEERMKILLIPKDPNDDKNVIM 112 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 EV AGG E+ +A L RMY+R+AE + +KTE +E G K +I G A+ Sbjct: 113 EVRGAAGGEEAALFAGTLYRMYSRFAEMQGWKTEVIESSPTGLGGYKEIIFMINGNGAFS 172 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +K E G HR+ R+ +S R HTS +++ P ++ +EIEI + D R+DT+ +SG G Sbjct: 173 KMKYENGAHRVQRVPETESGGRIHTSTATVACLPEAEE-VEIEIHDKDIRVDTFASSGPG 231 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTT SAVR+TH+PTG VV CQ E+SQ KNK +A +LRA++Y+ Q E A Sbjct: 232 GQSVNTTMSAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQ--EAQAEYD 289 Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+ +G G +IR+Y P V D R + +L+G +D+ + A + Sbjct: 290 AQRKSAVGSGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKMDEVIDALI 343 >gi|332885310|gb|EGK05561.1| peptide chain release factor 1 [Dysgonomonas mossii DSM 22836] Length = 361 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 102/283 (36%), Positives = 158/283 (55%), Gaps = 15/283 (5%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D+ L E+A EE D + N + KLE E K F + + DS +A +E+ G GG Sbjct: 74 DDSELREIAKEEMDAA-------NERMPKLEEEIK-FLLVPADPQDSKNAIMEIRGGTGG 125 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY ++ E + +KTE + +G G K + G YG LK E GV Sbjct: 126 DEAAIFAGDLYRMYQKYCEIKGWKTEITSVTEGTSGGFKEIIFTVTGEGVYGILKYESGV 185 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P ++ ++++I+ +D + T R+SGAGGQ+VN + Sbjct: 186 HRVQRVPATETQGRVHTSAATVAVLPEAEE-VDVDINPADIEMQTARSSGAGGQNVNKVE 244 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 + V++TH P+G+VV CQQ RSQ N+ A MLR KLY++EL K + I KT + Sbjct: 245 TKVQLTHKPSGLVVVCQQSRSQLANRELAMQMLRTKLYDIELSKY--MDAIASKRKTMVS 302 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G +IR+Y P + D R N+ + S V+DG++ + Sbjct: 303 TGDRSAKIRTYNY-PQGRMTDHRINLTMYNLSAVMDGEIQPII 344 >gi|83816205|ref|YP_445488.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855] gi|294507374|ref|YP_003571432.1| peptide chain release factor 1 [Salinibacter ruber M8] gi|119361602|sp|Q2S2U3|RF1_SALRD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83757599|gb|ABC45712.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855] gi|294343702|emb|CBH24480.1| peptide chain release factor 1 [Salinibacter ruber M8] Length = 357 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 107/346 (30%), Positives = 189/346 (54%), Gaps = 14/346 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R + + DP + + + L +E L+ + I + RL D LE Sbjct: 7 LDKVKHRFQEVESLMADPEVANDPDRMRELGQEHSRLEEVVEAIDRYE-RLLDERDELEG 65 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQ 131 + ++ + + L++++ + VE + L+ + + +A +E+ AGAGG E+ Sbjct: 66 MIRDESGEMEALAKEELEQLETKLPAVEEDLKQKLIPKDPEEEKNAIVEIRAGAGGDEAS 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L R+YT++A+++ + E ++ G + G + +KG + YG LK E GVHR+ Sbjct: 126 LFAGDLFRLYTQYAKQQGWTYELIDASPGTQGGFREVIFAVKGEDVYGTLKYEAGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P ++ ++++I+ SD I+T++A+G GGQ VNTTDSAVR Sbjct: 186 RVPETESSGRIHTSAATVAVLPEAEE-VDVDINPSDLTIETFKATGPGGQSVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 I H P+GV V CQ E+SQHKN+++A +LR+++YE + ++++ S +G G Sbjct: 245 IKHAPSGVEVSCQDEKSQHKNRSKAMRVLRSRVYEKKREEQQAEREEARRSM--VGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKD--LRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D L + S ++DG++D + A A Sbjct: 303 SAKIRTYNF-PQDRVTDHRLEGGQKNHSLQPIMDGEIDPIIDALRA 347 >gi|163789460|ref|ZP_02183899.1| peptide chain release factor 1 [Carnobacterium sp. AT7] gi|159875314|gb|EDP69379.1| peptide chain release factor 1 [Carnobacterium sp. AT7] Length = 358 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 116/345 (33%), Positives = 183/345 (53%), Gaps = 12/345 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD +V+ R LN DP + + L +E + ++ KE++ + D Sbjct: 1 MFDRLESVEGRYEELNELLSDPEVVSDTKRLMKLTKEEAAIRETVATYRRYKEVEQDISD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGG 127 +L L+ + + +E ++L++ K E+E K +L E D + +E+ AGG Sbjct: 61 TEDMLGEKLDSEMAEMAKEELNDLKKEKTEIEEKMKVLMLPKDENDDRNIIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+Q +A L MY ++A+ + +KTE L+ + G K TL+I G N Y LK E G Sbjct: 121 DEAQLFAGTLFNMYQKYADAQGWKTEVLDANITGIGGYKEITLMITGDNVYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ +E+++ + D R D Y ASGAGGQHVN T Sbjct: 181 HRVQRVPSTESQGRIHTSTATVVVMPEAEE-VELDLPDKDIRTDIYHASGAGGQHVNKTA 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+ V Q ERSQ KN+ +A +LRA++Y+ Q + + K+ IG Sbjct: 240 SAVRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHIQQAAQ--SEYDAERKSAIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P V D R + +L G LD+ + A Sbjct: 298 TGDRSERIRTYNY-PQSRVTDHRIGLTIQKLDQILSGKLDEIIDA 341 >gi|156546340|ref|XP_001606563.1| PREDICTED: similar to ENSANGP00000017484 [Nasonia vitripennis] Length = 402 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 99/252 (39%), Positives = 153/252 (60%), Gaps = 13/252 (5%) Query: 72 LLELALEEDDCSIL--QETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAG 126 L EL E+ D L +E N R+K E++ + F +L LSG+ + ++ LE+ AG G Sbjct: 101 LAELVEEDKDMKKLAEEEKLSNEARLK-EIDNELFSALAQSLSGD-NFDEIILEITAGVG 158 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + LL MY + + + +E+ + + G + A+++I G ++ L+ E G Sbjct: 159 GQEAMLFVKNLLEMYIKHLSYLGYSYDIIEMDESPQGGCRHASIMISGKESFEKLRHEAG 218 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ + + R HTS S+ V P +D I++EI D RIDT RASGAGGQHVNTT Sbjct: 219 VHRVQRVPATEKSGRIHTSVVSVGVLPQPND-IQVEIHAKDLRIDTMRASGAGGQHVNTT 277 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVR+TH+PTG+ V+CQ +RSQ +N+ A LRAK+YE +L + ++ + E K ++ Sbjct: 278 NSAVRVTHLPTGMSVECQTDRSQIRNRELAMAKLRAKMYEQKLAR--QLRSASEMRKQQM 335 Query: 307 GWG---RQIRSY 315 G G +IR+Y Sbjct: 336 GMGERHEKIRTY 347 >gi|224368815|ref|YP_002602976.1| PrfA [Desulfobacterium autotrophicum HRM2] gi|223691531|gb|ACN14814.1| PrfA [Desulfobacterium autotrophicum HRM2] Length = 391 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 113/349 (32%), Positives = 178/349 (51%), Gaps = 19/349 (5%) Query: 13 LFDWDNAVQRLSFLNTK-------TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 L D N + +L + + DP + + ++ + ++E L +S + Q Sbjct: 32 LLDLQNMINKLQGIKERYIKLENLLSDPAVIADQVKYQRCLKEHGELTKVVSAFADYQAV 91 Query: 66 LCDNLILLELALEED-DCSIL--QETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 L +LA + D D + +ET+D QR LE + K + D + LE+ Sbjct: 92 LQQMGEAKDLAKDPDPDIREMAKEETADLRAQREGLESKLKLL-LMPKDPRDDKNVILEI 150 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG GG E+ +A L RMY+R+AE + + +E G K +IKG A+ Sbjct: 151 RAGTGGEEAGLFAADLFRMYSRYAEIKGWTVNVIESSHSSAGGFKEVISMIKGNGAFSAF 210 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G HR+ R+ ++ R HTS ++ V P +D +E++I S+ ++D +RASG GGQ Sbjct: 211 KYESGTHRVQRVPETETQGRVHTSAVTVAVLPEAED-VELKIEPSELKVDVFRASGPGGQ 269 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+V CQ E+SQ KNK A +L+A++ L+ RE+ A Sbjct: 270 SVNTTDSAVRITHLPTGIVATCQDEKSQIKNKIAALKVLKARI--LDAMVREQEAKRAAQ 327 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K ++G G +IR+Y P + D R + +++ GD+ D + Sbjct: 328 RKGQVGTGDRSGRIRTYNF-PQGRMTDHRIGLTLYRLDNIMGGDIQDII 375 >gi|227538599|ref|ZP_03968648.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC 33300] gi|227241518|gb|EEI91533.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC 33300] Length = 357 Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 90/240 (37%), Positives = 141/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +E+ G GG E+ +A L RMYTR+ E + ++ E +++ +G G K L + Sbjct: 106 DAKNAIIEIRGGTGGDEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +AYG LK E GVHR+ R+ ++ R HTS +S+ V P +D +++E++ D + T Sbjct: 166 IGDDAYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAED-VDVELNPGDIEMQT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++ V++TH P+G+VV CQ ERSQ N+ A MLR KLYELE+QK+ Sbjct: 225 SRSGGAGGQNVNKVETKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKK 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + KT + G ++R+Y P V + R + + V+DGD+ + A Sbjct: 285 H--GDTAAKRKTMVSTGDRSAKVRTYNY-PQGRVTEHRIGLTLYNLPAVMDGDIQGIIDA 341 >gi|325107093|ref|YP_004268161.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces brasiliensis DSM 5305] gi|324967361|gb|ADY58139.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces brasiliensis DSM 5305] Length = 358 Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 90/236 (38%), Positives = 138/236 (58%), Gaps = 7/236 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AG GG E+ +A L MY+R+ E R +K E ++ H E G+K + G A+ Sbjct: 112 MEIRAGTGGDEAALFALNLYEMYSRYIETRGWKKEVMDFHPTEMGGVKEVVFSVSGEGAF 171 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 L+ E G HR+ R+ ++ R HTS +++ V P D+ +EI+I D ++DT+RASG Sbjct: 172 HELQFESGGHRVQRVPETETQGRIHTSAATVAVLPEADE-VEIDIKPEDLKVDTFRASGP 230 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VN T+SA+RITH+PTG VV CQ E+SQHKN+A A +LR+++ LE Q++ + Sbjct: 231 GGQKVNKTESAIRITHLPTGTVVTCQDEKSQHKNRASAMRVLRSRI--LENQQQAADSER 288 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +T IG G +IR+Y P V D R + ++ G+L++ + L Sbjct: 289 ASQRRTLIGTGDRSSRIRTYNY-PQGRVTDHRIGLTLHKLDQIMAGNLEELVSGLL 343 >gi|238060791|ref|ZP_04605500.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149] gi|237882602|gb|EEP71430.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149] Length = 362 Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 84/179 (46%), Positives = 117/179 (65%), Gaps = 8/179 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG ES +A LLRMYTR+AE+R + TE ++ D + G+K +L I Sbjct: 101 DAKDVIVEIKAGEGGEESALFAGDLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAI 160 Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K G + LK E GVHR+ R+ +S R HTS + + V P +D +++ + Sbjct: 161 KTKGVPEGGNGVWSRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAED-VDVSVDP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ QA +LRA+L Sbjct: 220 NDLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARL 278 >gi|325973695|ref|YP_004250759.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois] gi|325990139|ref|YP_004249838.1| peptide chain release factor 1 [Mycoplasma suis KI3806] gi|323575224|emb|CBZ40889.1| Peptide chain release factor 1 [Mycoplasma suis] gi|323652297|gb|ADX98379.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois] Length = 359 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 95/241 (39%), Positives = 142/241 (58%), Gaps = 12/241 (4%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S + D + +E+H+ AGG E+ + + L Y ++A + K+K +++ + E G+ Sbjct: 105 SNKYDGKNIVIEMHSAAGGEEAAIFVSNLFDSYKKYANENKWKLNVVDLRESER-GLAFI 163 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 T + G Y +K E GVHR+ R+ +S R HTS ++ V P D+ IEI++ SD Sbjct: 164 TFTLSGSKVYSKMKYESGVHRVQRVPETESKGRVHTSTITVSVLPEADE-IEIQLDPSDI 222 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RID YRASGAGGQHVN T+SAVR+ HIPT ++V CQQERSQ NK A+ +L+ KL+E E Sbjct: 223 RIDVYRASGAGGQHVNKTESAVRLVHIPTNIMVACQQERSQMLNKEIAFKILKTKLWERE 282 Query: 289 --LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 LQK E +N+ K +IG G +IR+Y P + D R + + + V++G Sbjct: 283 KKLQKEEFFSNL----KQQIGKGERAEKIRTYNY-PQNRITDHRILLTINNLTSVMEGHF 337 Query: 344 D 344 + Sbjct: 338 E 338 >gi|313606725|gb|EFR83443.1| peptide chain release factor 1 [Listeria monocytogenes FSL F2-208] Length = 309 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 107/300 (35%), Positives = 170/300 (56%), Gaps = 16/300 (5%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--- 116 K + +++ + LL L+++ + +E LQ+ K ++E + LL D ND Sbjct: 3 KNVNEQINETKELLGEKLDDEMREMAKEEFAELQKEKADLEERL--KLLLVPKDPNDDKN 60 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 LE+ AGG E+ +A L RMY+++AE R +K E ++ + G K ++ G + Sbjct: 61 VILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGND 120 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A+ +K E G HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT+ ++ Sbjct: 121 AFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFAST 179 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI 295 GAGGQ VNTT SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + REE Sbjct: 180 GAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEY 239 Query: 296 -ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 AN K+ +G G +IR+Y P V D R + +++G LD+ + A + Sbjct: 240 DAN----RKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 294 >gi|123966944|ref|YP_001012025.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9515] gi|229470357|sp|A2BYQ7|RF1_PROM5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|123201310|gb|ABM72918.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9515] Length = 364 Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 115/340 (33%), Positives = 183/340 (53%), Gaps = 17/340 (5%) Query: 24 SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALE 78 SF+N + + DP + N + +++ +ER L+ + ++ D + D+ LL+ Sbjct: 16 SFVNLEMQLADPDIANNPKKLELIAKERAKLEPLVLDFNQLLDTDKEIDDSRQLLKDNRN 75 Query: 79 EDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANM 136 + D +L E NL+ +K + K +LL + D LE+ AGAGG E+ WA Sbjct: 76 DKDMELLINEELCNLEVLKNSLIQKVTIALLPKDPRDERSVMLEIRAGAGGNEACIWAGD 135 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY R+ +K + + + + + G K + IKG + Y LK E GVHR+ R+ Sbjct: 136 LARMYERYGQKIGWSVKPISASESDMGGFKELVISIKGDSVYSQLKFEAGVHRVQRVPAT 195 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P D +E++I SD I T R+ GAGGQ+VN ++A+ + H P Sbjct: 196 ESQGRVHTSTATVAVMPEAD-PVEVKIDPSDLEIGTARSGGAGGQNVNKVETAIDLIHKP 254 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TG+ V C QERSQ +N+ +A +LRAKLYE++L++ AN E S+ + G RS Sbjct: 255 TGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANDKERSQRLMQVGTGDRSEK 310 Query: 317 LQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352 ++ Y KD RT + + +L G LD+ + A +A Sbjct: 311 IRTYNF-KDNRTTDHRLGSNFALEPILAGQLDEVIDACIA 349 >gi|313636342|gb|EFS02127.1| peptide chain release factor 2 [Listeria seeligeri FSL S4-171] Length = 142 Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 82/137 (59%), Positives = 100/137 (72%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ Sbjct: 1 LDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNRD 60 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN E + Sbjct: 61 QAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGN 120 Query: 335 PSDVLDGDLDDFMKATL 351 V+DGDLDDF+ A L Sbjct: 121 IQAVMDGDLDDFINAYL 137 >gi|296445919|ref|ZP_06887870.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b] gi|296256587|gb|EFH03663.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b] Length = 356 Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 140/244 (57%), Gaps = 13/244 (5%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD LEV AG GG E+ +A L R Y ++A + + E L +G G K Sbjct: 105 ADEKGVILEVRAGTGGDEAALFAGDLFRAYQKYAGVKGWGVEILSASEGALGGYKEIVAE 164 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G Y LK E GVHR+ R+ ++ R HTS +++ V P ++ +++ I + D +I+ Sbjct: 165 ISGRGVYARLKFESGVHRVQRVPATETQGRIHTSAATVAVLPQAEE-VDVAIDDKDLQIE 223 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R+ GAGGQHVN T+SA+RITH+P+G+VV Q+ERSQH+N+A+A +LR++L++ E Q+ Sbjct: 224 TMRSGGAGGQHVNKTESAIRITHLPSGIVVMMQEERSQHRNRAKAMEVLRSRLFDAERQR 283 Query: 292 REEI------ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + A +G ++E +IR+Y P V D R N+ V++G+LD+ Sbjct: 284 LDSARAADRKAQVGSGDRSE-----RIRTYNF-PQGRVTDHRINLTLYKLDRVIEGELDE 337 Query: 346 FMKA 349 A Sbjct: 338 IFDA 341 >gi|261886265|ref|ZP_06010304.1| peptide chain release factor 1 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 355 Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 114/321 (35%), Positives = 175/321 (54%), Gaps = 20/321 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLILLELA 76 + R + LN+ DP + ++ L +E+++L+ +A I + + +N LLE Sbjct: 10 IDRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIEENKTLLE-- 67 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA---YLEVHAGAGGTESQD 132 D + + D L+ ++ E+ + E L D ND +LE+ AG GG E+ Sbjct: 68 ----DPELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGTGGDEAAL 123 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + L Y R+ E+R +K E + +G G K LLIKG AY LK E G HR+ R Sbjct: 124 FVGDLATAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEGGTHRVQR 183 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P V+DS EI+I+ +D +ID R+SG GGQ VNT+ S+VR+ Sbjct: 184 VPETESQGRVHTSAITVAIMPEVEDS-EIDINPNDLKIDVMRSSGHGGQSVNTSVSSVRV 242 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310 THIPTG+VV Q +SQHKNK A +L+A+LY ++Q+RE + K ++G G Sbjct: 243 THIPTGLVVVNQDGKSQHKNKDAAIKVLKARLY--DMQERERREKESKERKDQVGTGDRS 300 Query: 311 -QIRSYVLQPYQMVKDLRTNI 330 +IR+Y P + D R N+ Sbjct: 301 GRIRTYNY-PQNRISDHRINL 320 >gi|23100453|ref|NP_693920.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831] gi|32171555|sp|Q8EM60|RF1_OCEIH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|22778686|dbj|BAC14954.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831] Length = 356 Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 111/335 (33%), Positives = 181/335 (54%), Gaps = 11/335 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILLELALE 78 R + LN DP + + + + +E+ L++ + KE+ ++L D ++E L+ Sbjct: 11 RYNKLNEMLSDPEVINDSKKLREYSKEQSGLEDVVQAYREYKEVTEQLNDAKEMMEDKLD 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANML 137 ++ +++ L K E+E LL + D + ++E+ AGG E+ +A L Sbjct: 71 DEMYEMVKAEIAELNGRKEELESSMKILLLPKDPNDDKNVFMEIRGAAGGDEAALFAGDL 130 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+R+AE + +K + +E G K +I G + Y LK E G HR+ R+ + Sbjct: 131 YRMYSRYAEHQGWKIDVMEASSTGVGGYKEVIFMINGSDVYSKLKYENGAHRVQRVPETE 190 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS +++ V P + +E+E+ + D R+DT+ +SG GGQ VNTT SAVR+TH+PT Sbjct: 191 SGGRIHTSTATVAVLPEAE-EVEVEVHDKDIRVDTFASSGPGGQSVNTTMSAVRLTHVPT 249 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+VV Q E+SQ KNK +A +LRA++Y+ Q E A E+ K+ +G G +IR+ Sbjct: 250 GIVVSIQDEKSQIKNKEKAMKVLRARIYDKFQQ--EAQAEYDENRKSAVGSGDRSERIRT 307 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 Y P V D R + ++ G LD+F+ A Sbjct: 308 YNF-PQNRVTDHRIGLTIQKLDQIMQGKLDEFIDA 341 >gi|317125570|ref|YP_004099682.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium calvum DSM 43043] gi|315589658|gb|ADU48955.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium calvum DSM 43043] Length = 359 Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 99/242 (40%), Positives = 142/242 (58%), Gaps = 11/242 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK----- 173 LEV AG GG ES +A LLRMY R+AE+R ++T + + + G K + I+ Sbjct: 106 LEVKAGEGGEESALFAGDLLRMYLRYAERRGWRTVVEDATESDLGGYKDVRVSIRSRGHQ 165 Query: 174 -GPNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 GP W LK E GVHR+ R+ +S R HTS + + V P ++ +E+ I D RI Sbjct: 166 PGPGEAPWARLKYEGGVHRVQRVPVTESQGRVHTSAAGVLVMPEAEE-VEVTIDPHDLRI 224 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK A +LRA+L++L Sbjct: 225 DVYRSSGPGGQSVNTTDSAVRITHLPTGLVVSCQNEKSQLQNKEAALRVLRARLHQLAKD 284 Query: 291 KREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + + A+ S+ + +IR+Y P + D RT + + V+DGDLD +++ Sbjct: 285 EADAEASAARRSQVRTVDRSERIRTYNF-PENRISDHRTGYKSYNLDHVIDGDLDPVVQS 343 Query: 350 TL 351 + Sbjct: 344 AI 345 >gi|149196233|ref|ZP_01873288.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155] gi|149140494|gb|EDM28892.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155] Length = 358 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/244 (37%), Positives = 141/244 (57%), Gaps = 7/244 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +E+ AGG E+ +A L++MY ++ + +K E +E + G+K+ + Sbjct: 109 DSRNCIVEIRPAAGGDEAALFAEDLMKMYQIYSSNKSWKVEVMEYTPSDLGGLKATVFSV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG + + L E GVHR+ RI ++ R HTS ++ V P ++ +++ I + + DT Sbjct: 169 KGEDVFRELNFESGVHRVQRIPKTETQGRVHTSTVTVAVLPEAEE-VDLHIDPKELKFDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQ VNTTDSAVR+THIPTG+ QQERSQH+NK A +LR+KL L+ + R Sbjct: 228 YRSSGAGGQCVNTTDSAVRVTHIPTGLACYSQQERSQHQNKEIAMQLLRSKL--LDEKIR 285 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E + + + +IG G +IR+Y P + D R + + DV+ G D M Sbjct: 286 QEKQKMSDERRGQIGTGDRSERIRTYNY-PQSRITDHRFGVTVHNLPDVMAGKFADVMDK 344 Query: 350 TLAI 353 LAI Sbjct: 345 ILAI 348 >gi|227552473|ref|ZP_03982522.1| peptide chain release factor RF1 [Enterococcus faecium TX1330] gi|257888289|ref|ZP_05667942.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733] gi|257896821|ref|ZP_05676474.1| peptide chain release factor 1 [Enterococcus faecium Com12] gi|257899725|ref|ZP_05679378.1| peptide chain release factor 1 [Enterococcus faecium Com15] gi|293378550|ref|ZP_06624713.1| peptide chain release factor 1 [Enterococcus faecium PC4.1] gi|293571480|ref|ZP_06682507.1| peptide chain release factor 1 [Enterococcus faecium E980] gi|227178385|gb|EEI59357.1| peptide chain release factor RF1 [Enterococcus faecium TX1330] gi|257824343|gb|EEV51275.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733] gi|257833386|gb|EEV59807.1| peptide chain release factor 1 [Enterococcus faecium Com12] gi|257837637|gb|EEV62711.1| peptide chain release factor 1 [Enterococcus faecium Com15] gi|291608485|gb|EFF37780.1| peptide chain release factor 1 [Enterococcus faecium E980] gi|292642879|gb|EFF61026.1| peptide chain release factor 1 [Enterococcus faecium PC4.1] Length = 357 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/242 (38%), Positives = 141/242 (58%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L MY ++AE + +KTE +E + G K ++I Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y LK E G HR+ R+ +S R HTS +++ V P ++ +EI+I + D R D Sbjct: 166 TGENVYSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIDIEDKDIRTDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQHVN T SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++Q+ Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQIKNREKAMKILRARVYD-KIQQ- 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + K+ +G G +IR+Y P V D R + +L G LD+ + A Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|326803667|ref|YP_004321485.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a] gi|326651316|gb|AEA01499.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a] Length = 360 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 108/297 (36%), Positives = 159/297 (53%), Gaps = 10/297 (3%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDA 117 KE+ + D L++ EED + + D L +R LE E K L S D + Sbjct: 53 KEVVSGIEDTEELIKETSEEDMLELAKSELDQLKAERDDLEEEIKVL-MLPSDPNDDKNI 111 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 +E+ AGG E+Q +A L MY+R+AE + + E + + G K L I G Sbjct: 112 IMEIRGAAGGDEAQLFAADLFEMYSRYAESQGWHVEVADASSNDLGGYKEIILQISGDKV 171 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS +++ V P ++D ++ EI E D R D YRASG Sbjct: 172 YSKLKYESGAHRVQRVPKTESQGRVHTSTATVGVMPELED-LDFEIDEKDIRTDIYRASG 230 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQHVN T SAVR+THIPTG+ V Q +RSQ +N+ +A +LR+++Y + + +E Sbjct: 231 AGGQHVNKTSSAVRMTHIPTGIQVAMQDQRSQQQNREKAMLILRSRVY--DYYQSQEQDE 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E K +G G +IR+Y P V D R N+ ++ G+LD+ + A + Sbjct: 289 YDEKRKNLVGTGDRSERIRTYNY-PQNRVTDHRINLTLQKLDRIMGGELDEIIDALI 344 >gi|33862085|ref|NP_893646.1| peptide chain release factor 1 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81575585|sp|Q7UZX1|RF1_PROMP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33634303|emb|CAE19988.1| peptide chain release factor RF-1 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 364 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 114/344 (33%), Positives = 183/344 (53%), Gaps = 15/344 (4%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLE 74 NA + L + DP + N + + + RER L+ + ++ D + D+ LL+ Sbjct: 12 NASESFVNLEMQLADPDIANNPKKLESIARERAKLEPLVLDFNQLLDTDKEIGDSKQLLK 71 Query: 75 LALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132 + D S++ E +L+ +K ++ K +LL + D LE+ AGAGG E+ Sbjct: 72 ENRNDKDMESLINEELFSLEDLKNQLIEKLTIALLPKDPRDERSVMLEIRAGAGGNEACI 131 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA L RMY R+ +K + + + + + G K + +KG + Y LK E GVHR+ R Sbjct: 132 WAGDLARMYERYGQKIGWTVKPISASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQR 191 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P D +E++I ++ I T R+ GAGGQ+VN ++A+ + Sbjct: 192 VPATESQGRVHTSTATVAVMPEAD-PVEVKIDPTEIEIGTARSGGAGGQNVNKVETAIDL 250 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 H PTG+ V C QERSQ +N+ +A +LRAKLYE++L++ AN E S+ + G Sbjct: 251 IHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLMQVGSGD 306 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352 RS ++ Y KD RT + + +L G LDD + A LA Sbjct: 307 RSEKIRTYNF-KDNRTTDHRLGSNFALEPILAGQLDDVIYACLA 349 >gi|90422036|ref|YP_530406.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB18] gi|119361591|sp|Q21BZ9|RF1_RHOPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|90104050|gb|ABD86087.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas palustris BisB18] Length = 361 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/241 (39%), Positives = 142/241 (58%), Gaps = 8/241 (3%) Query: 106 SLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +LL +A D + LE+ AG GG E+ +A L RMY ++A + + E + +G G Sbjct: 100 ALLPKDAMDDRNVMLEIRAGTGGDEASLFAGDLFRMYEKFAVLQGWSVEVVSASEGTMGG 159 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K +KG A+ LK E GVHR+ R+ ++ R HTS +++ V P V++ ++++I Sbjct: 160 YKEIIAEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEE-VDVDIK 218 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D RI+T RA GAGGQHVN T+SA+RITHIPTG+ V Q RSQHKN+A A N+LR+++ Sbjct: 219 PDDLRIETMRAQGAGGQHVNKTESAIRITHIPTGLQVMMQDSRSQHKNRASAMNILRSRI 278 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E Q+ + + + K ++G G +IR+Y P V D R N+ V+ G Sbjct: 279 YDAEQQRIDSVRS--AERKEKVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAG 335 Query: 342 D 342 + Sbjct: 336 E 336 >gi|73748899|ref|YP_308138.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1] gi|147669660|ref|YP_001214478.1| peptide chain release factor 1 [Dehalococcoides sp. BAV1] gi|289432895|ref|YP_003462768.1| peptide chain release factor 1 [Dehalococcoides sp. GT] gi|119361532|sp|Q3ZYA9|RF1_DEHSC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039969|sp|A5FQC5|RF1_DEHSB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|73660615|emb|CAI83222.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1] gi|146270608|gb|ABQ17600.1| bacterial peptide chain release factor 1 (bRF-1) [Dehalococcoides sp. BAV1] gi|288946615|gb|ADC74312.1| peptide chain release factor 1 [Dehalococcoides sp. GT] Length = 355 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 112/348 (32%), Positives = 192/348 (55%), Gaps = 20/348 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72 +N +R + + P + + + L +ER L + + K + L + L Sbjct: 5 LENCEKRFIEIEEEISKPEVINDARLVRTLAQERADLQDKVEMYRRYKTMAKELEEAKNL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAGGTES 130 LE +ED +++ +NL++ ++ Y+Q FE L D +E+ AG GG E+ Sbjct: 65 LESEKDEDMRGMVRGEIENLEKSLTDL-YEQMTFELLPKDPNDDKSIIMEIRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A+ L +MY R+A + +KTE ++I+ IK + G A+ LK E+GVHR+ Sbjct: 124 GLFASDLYKMYIRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P V++ ++I+I+ + R+D + +SGAGGQ+V +A+ Sbjct: 184 QRVPQTEASGRIHTSTATVAVLPQVEE-VDIDINMDEVRVDIFHSSGAGGQNVQKVATAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE------IANIGESSKT 304 R+TH+PTG+VV CQ ERSQ KNK +A+ +LRA+L ELE K +E A +G++ ++ Sbjct: 243 RLTHMPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRS 302 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +IR+Y P + D R + + +L+G LD+ + TLA Sbjct: 303 E-----KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIID-TLA 343 >gi|332290785|ref|YP_004429394.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5] gi|332168871|gb|AEE18126.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5] Length = 359 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 87/238 (36%), Positives = 142/238 (59%), Gaps = 4/238 (1%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEIHDGEEAGIKSATLL 171 D+ + +E+ AG GG E+ +A L RMYT++ + +K ++ +G G K Sbjct: 106 DAKNVVVEIRAGTGGDEASIFAGDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFE 165 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G + YG +K E GVHR+ R+ ++ R HTS +++ V P ++ +++I D R+D Sbjct: 166 ITGQDVYGTMKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVQIEPKDVRVD 224 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 + +SG GGQ VNTT SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K Sbjct: 225 FFCSSGPGGQSVNTTYSAVRLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAK 284 Query: 292 REEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 ++E +S+ G +IR+Y P V D R + ++++GD+ ++ Sbjct: 285 KQEEDAAKRNSQVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIVNGDIQKILE 341 >gi|69249626|ref|ZP_00605024.1| Peptide chain release factor 1 [Enterococcus faecium DO] gi|257880056|ref|ZP_05659709.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933] gi|257882292|ref|ZP_05661945.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502] gi|257885488|ref|ZP_05665141.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501] gi|257891147|ref|ZP_05670800.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410] gi|257893961|ref|ZP_05673614.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408] gi|258614612|ref|ZP_05712382.1| peptide chain release factor 1 [Enterococcus faecium DO] gi|260560331|ref|ZP_05832507.1| peptide chain release factor 1 [Enterococcus faecium C68] gi|261208268|ref|ZP_05922941.1| peptide chain release factor 1 [Enterococcus faecium TC 6] gi|289565643|ref|ZP_06446089.1| peptide chain release factor 1 [Enterococcus faecium D344SRF] gi|293553327|ref|ZP_06673963.1| peptide chain release factor 1 [Enterococcus faecium E1039] gi|293563060|ref|ZP_06677526.1| peptide chain release factor 1 [Enterococcus faecium E1162] gi|293567649|ref|ZP_06678992.1| peptide chain release factor 1 [Enterococcus faecium E1071] gi|294615325|ref|ZP_06695200.1| peptide chain release factor 1 [Enterococcus faecium E1636] gi|294617194|ref|ZP_06696846.1| peptide chain release factor 1 [Enterococcus faecium E1679] gi|294623635|ref|ZP_06702473.1| peptide chain release factor 1 [Enterococcus faecium U0317] gi|314937739|ref|ZP_07845061.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04] gi|314942363|ref|ZP_07849210.1| peptide chain release factor 1 [Enterococcus faecium TX0133C] gi|314947687|ref|ZP_07851096.1| peptide chain release factor 1 [Enterococcus faecium TX0082] gi|314952118|ref|ZP_07855137.1| peptide chain release factor 1 [Enterococcus faecium TX0133A] gi|314992371|ref|ZP_07857803.1| peptide chain release factor 1 [Enterococcus faecium TX0133B] gi|314997442|ref|ZP_07862389.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01] gi|68194105|gb|EAN08645.1| Peptide chain release factor 1 [Enterococcus faecium DO] gi|257814284|gb|EEV43042.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933] gi|257817950|gb|EEV45278.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502] gi|257821344|gb|EEV48474.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501] gi|257827507|gb|EEV54133.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410] gi|257830340|gb|EEV56947.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408] gi|260073676|gb|EEW62002.1| peptide chain release factor 1 [Enterococcus faecium C68] gi|260077525|gb|EEW65243.1| peptide chain release factor 1 [Enterococcus faecium TC 6] gi|289162611|gb|EFD10465.1| peptide chain release factor 1 [Enterococcus faecium D344SRF] gi|291589584|gb|EFF21389.1| peptide chain release factor 1 [Enterococcus faecium E1071] gi|291591828|gb|EFF23462.1| peptide chain release factor 1 [Enterococcus faecium E1636] gi|291596539|gb|EFF27780.1| peptide chain release factor 1 [Enterococcus faecium E1679] gi|291596961|gb|EFF28174.1| peptide chain release factor 1 [Enterococcus faecium U0317] gi|291602551|gb|EFF32767.1| peptide chain release factor 1 [Enterococcus faecium E1039] gi|291604974|gb|EFF34442.1| peptide chain release factor 1 [Enterococcus faecium E1162] gi|313588451|gb|EFR67296.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01] gi|313593096|gb|EFR71941.1| peptide chain release factor 1 [Enterococcus faecium TX0133B] gi|313595737|gb|EFR74582.1| peptide chain release factor 1 [Enterococcus faecium TX0133A] gi|313598876|gb|EFR77721.1| peptide chain release factor 1 [Enterococcus faecium TX0133C] gi|313642877|gb|EFS07457.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04] gi|313645928|gb|EFS10508.1| peptide chain release factor 1 [Enterococcus faecium TX0082] Length = 357 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/242 (38%), Positives = 141/242 (58%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L MY ++AE + +KTE +E + G K ++I Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N Y LK E G HR+ R+ +S R HTS +++ V P ++ +EI+I + D R D Sbjct: 166 TGDNVYSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIDIEDKDIRTDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQHVN T SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++Q+ Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQIKNREKAMKILRARVYD-KIQQ- 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + K+ +G G +IR+Y P V D R + +L G LD+ + A Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|47218188|emb|CAF97052.1| unnamed protein product [Tetraodon nigroviridis] Length = 409 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 95/208 (45%), Positives = 126/208 (60%), Gaps = 6/208 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD N+ LEV AG GG E+ + + MY +A+ + + LE + G++ A+ Sbjct: 153 EADLNELVLEVTAGVGGQEAMLFTAEVFDMYQGYAQHHGWSFDTLEYMTSDLGGLRHASA 212 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G Y +K E GVHR+ R+ + R HTS ++ V P + I I++ D RI Sbjct: 213 SISGRLCYKKMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAVLPQPTE-ISFTINQKDLRI 271 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ +A LRAKLY L+L+ Sbjct: 272 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVAECQQERSQLKNREKAMKALRAKLYSLKLE 331 Query: 291 KREEIANIGESSKTEIGW-GR--QIRSY 315 EE + K +IG GR +IR+Y Sbjct: 332 --EETSKRYNQRKIQIGTKGRSEKIRTY 357 >gi|28493402|ref|NP_787563.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist] gi|28572487|ref|NP_789267.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27] gi|28410619|emb|CAD67005.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27] gi|28476443|gb|AAO44532.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist] Length = 347 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 102/264 (38%), Positives = 147/264 (55%), Gaps = 9/264 (3%) Query: 96 KLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 KL + +SLL+ E D D +E+ G GG ES +A LLRMY +A+ +K E Sbjct: 79 KLSDAQARLQSLLTRRDENDHRDVIMEIKGGEGGAESALFAADLLRMYAYFADSNGWKVE 138 Query: 154 ALEIHDGEEAGIKSATLLI-KGPNA----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 L + G K L I K P++ + LK E GVHR+ R+ +S R HTS + Sbjct: 139 ILSYSENTLGGYKDVQLAIRKTPSSTHGVWELLKYEGGVHRVQRVPATESQGRIHTSTTG 198 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V+P VD EIEI+ + RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+S Sbjct: 199 VLVFPEVDAPGEIEITNDEIRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKS 258 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLR 327 Q +N+ A +LRA+L + E+ + S+ + +IR+Y P V D R Sbjct: 259 QIQNRESAMRILRARLIAKRQDEIEKTTHAARKSQIRAMDRSERIRTYNF-PENRVVDHR 317 Query: 328 TNIEKTSPSDVLDGDLDDFMKATL 351 T + + VL+GD+ +++ + Sbjct: 318 TGYKAYNLDQVLNGDVSQLIRSCI 341 >gi|327262069|ref|XP_003215848.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Anolis carolinensis] Length = 394 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/225 (42%), Positives = 134/225 (59%), Gaps = 9/225 (4%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D +D +EV +G GG E+ + + MY ++A + + + LE + G++ A Sbjct: 130 SEETDESDLIMEVTSGVGGQEAMLFTAEMFDMYQQYAAYKNWNFDILEYAPSDIGGLRYA 189 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P ++ I + I+ + Sbjct: 190 SAAIAGHEAYRQMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPNE-INLTINPKEL 248 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RI+T RASGAGGQHVNTTDSAVRI HIPTGVV +CQQERSQ KNKA+A +LRAKLY ++ Sbjct: 249 RIETKRASGAGGQHVNTTDSAVRILHIPTGVVSECQQERSQIKNKAKAIQILRAKLYNMK 308 Query: 289 LQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 L+ KRE I +K G +IR+Y P V D R + Sbjct: 309 LEDESRKRETARKIQTGTK---GRSEKIRTYNF-PQDRVTDHRIS 349 >gi|302820744|ref|XP_002992038.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii] gi|300140160|gb|EFJ06887.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii] Length = 654 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/198 (45%), Positives = 128/198 (64%), Gaps = 8/198 (4%) Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 GEEAGIKSATL I G AYG++ GE+G HRLVR P++S R TSF+ + V V Sbjct: 119 GEEAGIKSATLEIDGRYAYGYISGEKGTHRLVRQLPFNSKGLRQTSFAGVEVMHVRTKLN 178 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + ++ R+ G GGQ+VN ++AVR+THIPTG+ ++C ++RSQ +NK +A + Sbjct: 179 STQPGQA----TLCRSGGKGGQNVNMVETAVRVTHIPTGIALRCSEKRSQLQNKIKAIVL 234 Query: 280 LRAKLYE-LELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 L++KL LE Q+ EI I G+ K E WG+QIR+YV PY++V DLRTN+E + S Sbjct: 235 LKSKLLVILEDQRAAEIKEIRGDVVKAE--WGQQIRNYVFHPYKLVMDLRTNVETSDISG 292 Query: 338 VLDGDLDDFMKATLAIKK 355 ++DG L+ + A L K+ Sbjct: 293 IMDGKLEPLLTAYLMSKQ 310 >gi|225159115|ref|ZP_03725422.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2] gi|224802321|gb|EEG20586.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2] Length = 373 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 116/344 (33%), Positives = 173/344 (50%), Gaps = 28/344 (8%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R L+ + P + + A + RE Q + ++ D L E+A E Sbjct: 12 RRADELDAQMRSPTFYNDARAAAAVTREHQQVTQLLA------DHAAHRKTLAEIA--EA 63 Query: 81 DCSILQETSDNLQRIKLEVEYKQ--------FESLLSG-----EADSNDAYLEVHAGAGG 127 I ++D R E E + F ++L+G DS D LE+ AG GG Sbjct: 64 QALIKDPSADPDLRELAEAELPELEARRERLFRTVLAGMIPPEPTDSRDTVLEIRAGTGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+AE R + E + E G + + +I+G + Y LK E GV Sbjct: 124 EEAALFAAELARMYHRYAEDRGWTVEPTGSSESERGGFREVSFIIRGQDVYKQLKFESGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++N R HTS ++ V P + ++I I D I RASG GGQ VNTTD Sbjct: 184 HRVQRVPLTEANGRIHTSTVTVAVLPEAQE-VDIRIDPQDLEITVQRASGPGGQGVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRI H PTG++V C RSQ KNKA A ++LRA+L L+ ++ EE A + +IG Sbjct: 243 SAVRIVHKPTGMIVYCADGRSQQKNKASAMSVLRARL--LQRKQDEEAAKYAAQRRGQIG 300 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 G +IR+Y P + D R + S + V++G L++ ++ Sbjct: 301 TGDRSERIRTYNF-PQNRLTDHRIGLTLYSLTQVMEGALNEVVQ 343 >gi|313622330|gb|EFR92817.1| peptide chain release factor 1 [Listeria innocua FSL J1-023] Length = 358 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 116/349 (33%), Positives = 191/349 (54%), Gaps = 16/349 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 ++D AV+ R LN DP + + + L +E+ + + +E I +++ + Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNINEQIDE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 LL L+++ + +E LQ+ K E+E + L+ + D + LE+ AGG Sbjct: 61 TRELLGEKLDDEMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G Sbjct: 121 DEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT+ ++GAGGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSKTE 305 SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + REE AN K+ Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RKSA 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R + +++G LD+ + A + Sbjct: 296 VGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343 >gi|161507266|ref|YP_001577220.1| peptide chain release factor 1 [Lactobacillus helveticus DPC 4571] gi|260102570|ref|ZP_05752807.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM 20075] gi|172048215|sp|A8YUJ1|RF1_LACH4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160348255|gb|ABX26929.1| Peptide chain release factor 1 [Lactobacillus helveticus DPC 4571] gi|260083597|gb|EEW67717.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM 20075] Length = 362 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 99/283 (34%), Positives = 156/283 (55%), Gaps = 15/283 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+E+A EE+ I +E + +IK+ + L D D +E+ AGG E+ Sbjct: 76 LIEMAKEEN-AEIEKEIPELEDQIKILM-------LPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K IG G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAIGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + V++G+LD+ + A + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALI 346 >gi|256850891|ref|ZP_05556280.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN] gi|260661105|ref|ZP_05862019.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN] gi|282934197|ref|ZP_06339475.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1] gi|297205768|ref|ZP_06923163.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16] gi|256615953|gb|EEU21141.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN] gi|260548042|gb|EEX24018.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN] gi|281301811|gb|EFA94077.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1] gi|297148894|gb|EFH29192.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16] Length = 362 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/243 (36%), Positives = 140/243 (57%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE + +K ++ E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + ++I++ D R+D Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+A+A +L++++Y+ + Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQN 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A+ E K +G G +IR+Y P V D R + +++G+LD+ + A Sbjct: 288 Q--ASYDEKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIISA 344 Query: 350 TLA 352 + Sbjct: 345 LIV 347 >gi|323356873|ref|YP_004223269.1| protein chain release factor A [Microbacterium testaceum StLB037] gi|323273244|dbj|BAJ73389.1| protein chain release factor A [Microbacterium testaceum StLB037] Length = 368 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 95/248 (38%), Positives = 147/248 (59%), Gaps = 12/248 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ G GG ES +A LLRMY ++A +KTE LE + + G K + I Sbjct: 110 DARDVIMEIKGGEGGAESALFAADLLRMYLQYAASMGWKTELLERTESDLGGYKDVQVAI 169 Query: 173 KGPNA------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG ++ + LK E GVHR+ R+ +S R HTS + + V+P VD+ E+ I + Sbjct: 170 KGSSSDPAQGVWAHLKYEGGVHRVQRVPATESQGRIHTSTTGVLVFPEVDEPEEVAIDPN 229 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +ID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ +LRA+L Sbjct: 230 DLKIDVFRSSGPGGQSVNTTDSAVRITHVPTGIVVSMQNEKSQLQNREAGMRVLRARLLA 289 Query: 287 LELQKREEIANIGESSKTEI-GWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 + ++R+ +A ++ +++I G R +IR+Y P + D RT + + V+DG L Sbjct: 290 KQQEERDAVA--ADARRSQIRGMDRSERIRTYNF-PENRIADHRTGYKAYNLDQVMDGAL 346 Query: 344 DDFMKATL 351 +++ + Sbjct: 347 GPIIESAI 354 >gi|269128128|ref|YP_003301498.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183] gi|268313086|gb|ACY99460.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183] Length = 361 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 104/245 (42%), Positives = 143/245 (58%), Gaps = 11/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LE+ AG GG ES +A LLRMY R+AE+ +KTE L + G K T+ + Sbjct: 98 DDKDVILEIKAGEGGEESALFAGDLLRMYLRYAERIGWKTEILSSQPSDLGGYKDVTVAV 157 Query: 173 K---GPN-----AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K GP+ A+ LK E GVHR+ R+ +S R HTS + V P ++ I+++I Sbjct: 158 KARPGPDGEPIGAWSHLKFEGGVHRVQRVPVTESQGRIHTSAVGVLVTPEAEE-IDVQID 216 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YR+SG GGQ VNTTDSAVRITH+PTGVVV CQ E+SQ +NK QA +LR++L Sbjct: 217 PNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKEQAMRILRSRL 276 Query: 285 YELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L Q+ E A S+ + ++R+Y P + D R + + VLDGDL Sbjct: 277 LALAQQEAEAAAAAERRSQVRTVDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGDL 335 Query: 344 DDFMK 348 + ++ Sbjct: 336 HNVIQ 340 >gi|309791603|ref|ZP_07686096.1| peptide chain release factor 1 [Oscillochloris trichoides DG6] gi|308226321|gb|EFO80056.1| peptide chain release factor 1 [Oscillochloris trichoides DG6] Length = 360 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 124/349 (35%), Positives = 175/349 (50%), Gaps = 24/349 (6%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA-KMLMRERQHLDNAISFIKEIQDRLCD 68 LG L V LS L + + V+ A + R RQ + A + + E D Sbjct: 15 LGELMAQPEVVNNLSLLQQYAREQRELEEVVNAFQAYQRARQAAEEAHTMLNESSD---- 70 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + ELA EE + Q T RI E + L D+ D +E+ G GG Sbjct: 71 -AEMRELAHEELES---QRT-----RIAQLEEEIKLLLLPRDPNDAKDVIIEIRQGEGGD 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY R+AE R +K E I D G K A I+G NAY LK E GVH Sbjct: 122 EAALFAADLYRMYVRYAELRGWKVEVDSITDNGIGGFKEAVFEIRGENAYSQLKYEGGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +++ V P V+ ++ IEI + D R D +R+ G GGQ VNTTDS Sbjct: 182 RVQRVPATEARGRIHTSTATVAVMPEVEPTV-IEIKDEDVRTDVFRSGGHGGQGVNTTDS 240 Query: 249 AVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 AVR+ + P +VV CQ RSQ KN+ +A ++LRAKLY E +K++ G S + Sbjct: 241 AVRLVYRGGTPDEIVVTCQDGRSQIKNREKAMSVLRAKLYAREQEKQQRAQ--GASRLAQ 298 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P + D R ++ VL G+LD + A + Sbjct: 299 VGTGERAEKIRTYNF-PQDRITDHRIGQNFSNLPGVLAGNLDKIIDALI 346 >gi|84494539|ref|ZP_00993658.1| peptide chain release factor 1 [Janibacter sp. HTCC2649] gi|84384032|gb|EAP99912.1| peptide chain release factor 1 [Janibacter sp. HTCC2649] Length = 360 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 94/240 (39%), Positives = 142/240 (59%), Gaps = 10/240 (4%) Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK------ 173 EV AG GG ES +A LLRMY R+AE+R ++TE L + + G K + +K Sbjct: 107 EVKAGEGGEESALFAGDLLRMYLRYAERRGWRTEVLGSTETDLGGFKDVQVSVKSKKAPL 166 Query: 174 -GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + LK E GVHR+ R+ ++ R HTS + +WV P ++ +E+EI +D RID Sbjct: 167 PGEGPWARLKYEGGVHRVQRVPITETQGRIHTSAAGVWVMPEAEE-VEVEIHANDLRIDV 225 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QK 291 +R+SG GGQ VNTTDSAVR+TH+PTG VV CQ E+SQ +N+ A +LRA+L+++ + + Sbjct: 226 FRSSGPGGQSVNTTDSAVRLTHLPTGTVVICQNEKSQLQNREAAMRVLRARLHQMAMDEA 285 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 A+I S + +IR+Y + + D RT + + VL G+LD +++ + Sbjct: 286 NAASADIRASQVRTVDRSERIRTYNFAENR-ISDHRTGFKAYNLDTVLGGELDAVVESAM 344 >gi|315283708|ref|ZP_07871812.1| peptide chain release factor 1 [Listeria marthii FSL S4-120] gi|313612648|gb|EFR86686.1| peptide chain release factor 1 [Listeria marthii FSL S4-120] Length = 358 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 115/349 (32%), Positives = 191/349 (54%), Gaps = 16/349 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 ++D AV+ R LN DP + + + L +E+ + + +E + +++ + Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNEQINE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 LL L+++ + +E LQ+ K E+E + L+ + D + LE+ AGG Sbjct: 61 TKELLGEKLDDEMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G Sbjct: 121 DEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT+ ++GAGGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSKTE 305 SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + REE AN K+ Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RKSA 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R + +++G LD+ + A + Sbjct: 296 VGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343 >gi|213962214|ref|ZP_03390478.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno] gi|213955220|gb|EEB66538.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno] Length = 357 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 170/304 (55%), Gaps = 13/304 (4%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVE 100 K LM +R+ N + E ++ + D + ++E+A + L E+ + L +++ E++ Sbjct: 42 KELMDKREEYINVTGNLAEAEEIIADGSDAEMVEMAKLQ-----LDESKERLPQLEEEIK 96 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 Y + D+ +A +E+ AG GG E+ +A L RMYT++ + + + T ++ ++G Sbjct: 97 YM---LIPKDPEDAKNAVMEIRAGTGGDEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEG 153 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 G K + G N YG LK E GVHR+ R+ ++ R HTS +++ V P ++ + Sbjct: 154 TAGGYKEIIFEVTGDNVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FD 212 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +E++ +D I ++G GGQ VNTT SA+++ HIPTG+ V+CQ E+SQHKN +A +L Sbjct: 213 VELNMADVNIIRTTSTGPGGQSVNTTYSAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVL 272 Query: 281 RAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 R++LYELEL K+ E + S G +IR+Y P V D R + +V+ Sbjct: 273 RSRLYELELAKKMEADSARRKSMVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVI 331 Query: 340 DGDL 343 +GD+ Sbjct: 332 NGDV 335 >gi|256820779|ref|YP_003142058.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271] gi|315223922|ref|ZP_07865767.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287] gi|256582362|gb|ACU93497.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271] gi|314946094|gb|EFS98098.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287] Length = 357 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 171/304 (56%), Gaps = 13/304 (4%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVE 100 K LM +R N ++E ++ + D + ++E+A + L+E+ + L +++ E++ Sbjct: 42 KELMDKRDEYINVTGNLQEAEEIIADGSDAEMVEMAKLQ-----LEESKERLPQLEEEIK 96 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 Y + D+ +A +E+ AG GG E+ +A L RMYT++ + + + T ++ ++G Sbjct: 97 YM---LIPKDPEDAKNAVMEIRAGTGGDEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEG 153 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 G K + G N YG LK E GVHR+ R+ ++ R HTS +++ V P ++ + Sbjct: 154 TAGGYKEIIFEVTGDNVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVIVLPEAEE-FD 212 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +E+ +D +I ++G GGQ VNTT SA+++ HIPTG+ V+CQ E+SQHKN +A +L Sbjct: 213 VELDMADVKIIRTTSTGPGGQSVNTTYSAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVL 272 Query: 281 RAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 R++LYE+EL K+ E + S G +IR+Y P V D R + +V+ Sbjct: 273 RSRLYEMELAKKMEADSARRKSMVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVI 331 Query: 340 DGDL 343 +GD+ Sbjct: 332 NGDV 335 >gi|111018484|ref|YP_701456.1| peptide chain release factor 1 [Rhodococcus jostii RHA1] gi|119361595|sp|Q0SGN8|RF1_RHOSR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110818014|gb|ABG93298.1| peptide chain release factor RF1 [Rhodococcus jostii RHA1] Length = 359 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 113/281 (40%), Positives = 159/281 (56%), Gaps = 11/281 (3%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWA 134 L DD S E + L+ LE++ K LL+ D +D LEV +G GG ES +A Sbjct: 69 LAADDSSFAAEVPE-LEAQVLELD-KALTDLLAPRDPHDGDDVVLEVKSGEGGEESALFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQGVHR 189 + L RMY R+AE+ ++ E L+ + G K ATL IK + LK E GVHR Sbjct: 127 SDLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS + + +YP ++ E++I E+D RID YR+SG GGQ VNTTDSA Sbjct: 187 VQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308 VRITH+PTG+VV CQ ERSQ +NKA+A +L A+L + + A+ G S+ + Sbjct: 247 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDR 306 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R + + VLDG+LD + A Sbjct: 307 SERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDA 346 >gi|323466867|gb|ADX70554.1| Peptide chain release factor 1 [Lactobacillus helveticus H10] Length = 362 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 98/283 (34%), Positives = 156/283 (55%), Gaps = 15/283 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+E+A EE+ I +E + +IK+ + L D D +E+ AGG E+ Sbjct: 76 LIEMAKEEN-AEIEKEIPELEDQIKILM-------LPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + V++G+LD+ + A + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALI 346 >gi|313631914|gb|EFR99059.1| peptide chain release factor 1 [Listeria seeligeri FSL N1-067] Length = 358 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 11/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A L RMY+++AE R +K E ++ + G K ++ Sbjct: 106 DDKNVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMM 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +A+ +K E G HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT Sbjct: 166 NGNDAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 + ++GAGGQ VNTT SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + Sbjct: 225 FASTGAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREA 284 Query: 292 REEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 REE AN K+ +G G +IR+Y P V D R + +++G LD+ + Sbjct: 285 REEYDAN----RKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEII 339 Query: 348 KATL 351 A + Sbjct: 340 DALI 343 >gi|300789609|ref|YP_003769900.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32] gi|299799123|gb|ADJ49498.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32] Length = 356 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 144/243 (59%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +E+ +G GG ES +A LLRMY R+AE+ +K E L+ D + G K TL I Sbjct: 101 DGSDVVMEIKSGEGGEESALFAGDLLRMYLRYAERHGWKAEVLDSVDSDLGGFKDVTLSI 160 Query: 173 KGPNA-----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K A + LK E GVHR+ R+ +S R HTS S + +Y + +E+EI +D Sbjct: 161 KSKAAAVDGVWSRLKFEGGVHRVQRVPATESQGRIHTSASGVLIY-PEPEEVEVEIDPND 219 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A+A +L+A+L + Sbjct: 220 LRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRARALQVLQARLQAV 279 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ A+ S+ + ++R+Y P + D R N + + VLDGDLD Sbjct: 280 AEEEAAAKASDARRSQVRTVDRSERVRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGV 338 Query: 347 MKA 349 + A Sbjct: 339 LDA 341 >gi|312375908|gb|EFR23156.1| hypothetical protein AND_13424 [Anopheles darlingi] Length = 406 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 108/283 (38%), Positives = 161/283 (56%), Gaps = 22/283 (7%) Query: 38 NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97 NV+E + +R+ + + +KE++D D +I +L EE + S+ L R+ Sbjct: 85 NVVE---MYEQRKIVVENLGSLKELKDDKDDEMI--QLLKEEREA-----YSNILGRLDR 134 Query: 98 EVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 E+ E +LS + D +EV AG GG E+ +A L MY + E + ++ E L Sbjct: 135 EI----MEGILSMDEDEEYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEHKDWEVEML 190 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 + + GI+ AT++I G + Y LK E GVHR+ RI + + R HTS ++ + P Sbjct: 191 QTEGTDLGGIRHATIIINGTDVYRCLKYEGGVHRVQRIPATEKSGRIHTSTVTVAIIPRP 250 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD E+++ E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+ Sbjct: 251 DD-FEVDLKEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQVKNREI 309 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 A L AKL + EL+ R A+ K+++G +IR+Y Sbjct: 310 AKQKLVAKLMQQELEAR--FASTQALKKSQVGQSLRNEKIRTY 350 >gi|284032945|ref|YP_003382876.1| peptide chain release factor 1 [Kribbella flavida DSM 17836] gi|283812238|gb|ADB34077.1| peptide chain release factor 1 [Kribbella flavida DSM 17836] Length = 359 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/245 (40%), Positives = 142/245 (57%), Gaps = 10/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D DA LE+ AG GG ES +A LL+MY ++AE + +KTE L+ + + G KS T+ + Sbjct: 100 DDKDAILEIKAGEGGDESALFAGDLLKMYLKFAETQNWKTEVLDSAESDLGGYKSITVAV 159 Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K G Y LK E GVHR+ R+ +S R HTS + + V P +D +++EI Sbjct: 160 KAKGTPEPGEAPYAKLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAED-VDVEIDP 218 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ QA +LR++L Sbjct: 219 NDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNREQAMRVLRSRLL 278 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + ++ A+ S+ + +IR+Y P D R + + VL GDL Sbjct: 279 AAAQEAADQEASDARRSQIRTVDRSERIRTYNF-PENRFSDHRVGYKAHNLDQVLGGDLA 337 Query: 345 DFMKA 349 ++A Sbjct: 338 PVIQA 342 >gi|16801748|ref|NP_472016.1| peptide chain release factor 1 [Listeria innocua Clip11262] gi|116873908|ref|YP_850689.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str. SLCC5334] gi|20139333|sp|Q927V0|RF1_LISIN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|123466615|sp|A0ALM8|RF1_LISW6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|16415223|emb|CAC97913.1| prf1 [Listeria innocua Clip11262] gi|116742786|emb|CAK21910.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str. SLCC5334] gi|313617102|gb|EFR89654.1| peptide chain release factor 1 [Listeria innocua FSL S4-378] Length = 358 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 115/349 (32%), Positives = 191/349 (54%), Gaps = 16/349 (4%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 ++D AV+ R LN DP + + + L +E+ + + +E + +++ + Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQIDE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGG 127 LL L+++ + +E LQ+ K E+E + L+ + D + LE+ AGG Sbjct: 61 TRELLGEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G Sbjct: 121 DEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT+ ++GAGGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSKTE 305 SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + REE AN K+ Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RKSA 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G G +IR+Y P V D R + +++G LD+ + A + Sbjct: 296 VGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 343 >gi|313636275|gb|EFS02086.1| peptide chain release factor 1 [Listeria seeligeri FSL S4-171] Length = 358 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 11/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A L RMY+++AE R +K E ++ + G K ++ Sbjct: 106 DDKNVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMM 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +A+ +K E G HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT Sbjct: 166 NGNDAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 + ++GAGGQ VNTT SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + Sbjct: 225 FASTGAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREA 284 Query: 292 REEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 REE AN K+ +G G +IR+Y P V D R + +++G LD+ + Sbjct: 285 REEYDAN----RKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVI 339 Query: 348 KATL 351 A + Sbjct: 340 DALI 343 >gi|289435805|ref|YP_003465677.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172049|emb|CBH28595.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 358 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 11/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A L RMY+++AE R +K E ++ + G K ++ Sbjct: 106 DDKNVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMM 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +A+ +K E G HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT Sbjct: 166 NGNDAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 + ++GAGGQ VNTT SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + Sbjct: 225 FASTGAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREA 284 Query: 292 REEI-ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 REE AN K+ +G G +IR+Y P V D R + +++G LD+ + Sbjct: 285 REEYDAN----RKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEII 339 Query: 348 KATL 351 A + Sbjct: 340 DALI 343 >gi|332671313|ref|YP_004454321.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484] gi|332340351|gb|AEE46934.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484] Length = 362 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 99/247 (40%), Positives = 142/247 (57%), Gaps = 9/247 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D LE+ AG GG ES +A LLRMYTR+AE+ ++T+ LE + + G K L + Sbjct: 103 DARDVILEIKAGEGGEESALFAGDLLRMYTRYAERMGWQTQVLESTESDLGGFKDVHLSV 162 Query: 173 KGPNA-------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K A + LK E GVHR+ R+ +S R HTS + + V P +D E++I Sbjct: 163 KARGAVAPEDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAEDEGEVDIDP 222 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ QA +LRA+L Sbjct: 223 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNREQAMRVLRARLL 282 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ A+ S+ + +IR+Y P + D RT + + VL GDL Sbjct: 283 AARQEEAAAAASQARRSQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLGGDLG 341 Query: 345 DFMKATL 351 +++ + Sbjct: 342 PVVQSAI 348 >gi|145222895|ref|YP_001133573.1| peptide chain release factor 1 [Mycobacterium gilvum PYR-GCK] gi|315443360|ref|YP_004076239.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. Spyr1] gi|189039980|sp|A4T8L3|RF1_MYCGI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145215381|gb|ABP44785.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium gilvum PYR-GCK] gi|315261663|gb|ADT98404.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. Spyr1] Length = 357 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 119/315 (37%), Positives = 168/315 (53%), Gaps = 15/315 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP L + A+ + R + ++ ++++ D ELA DD S Sbjct: 18 LEQRLADPDLHADAGAARKVGRRFAQISPIVATYRKLEAARGDLEAARELAA--DDASFA 75 Query: 86 QETSDNLQRI-KLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 E + +I L+ + LL+ D++D LEV +G GG ES +A L RMY Sbjct: 76 AEVDELTDQIGDLD---RALTDLLAPRDPHDADDIVLEVKSGEGGEESALFAADLARMYI 132 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLI--KGPNAYG-W--LKGEQGVHRLVRISPYD 197 R+AE+ + L + G K ATL I KG +A G W LK E GVHR+ R+ + Sbjct: 133 RYAERHGWTVTMLGETTSDLGGYKDATLSIASKGDSADGVWARLKFEGGVHRVQRVPVTE 192 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS + + VYP D+ +++I ESD R+D YR+SG GGQ VNTTDSAVRITH+PT Sbjct: 193 SQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRVDVYRSSGKGGQGVNTTDSAVRITHLPT 252 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSKTEIGWGRQIRSYV 316 G+VV CQ ERSQ +NKA+A +L A+L L E Q + + S + +IR+Y Sbjct: 253 GIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRSERIRTYN 312 Query: 317 LQPYQMVKDLRTNIE 331 P + D R N + Sbjct: 313 F-PENRIADHRINFK 326 >gi|171920548|ref|ZP_02695589.3| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178800|ref|ZP_02554523.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024350|ref|ZP_02570606.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518435|ref|ZP_02556548.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524208|ref|ZP_02557610.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867475|ref|ZP_03079479.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273256|ref|ZP_03205792.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225550782|ref|ZP_03771731.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551438|ref|ZP_03772384.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903245|gb|EDT49534.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209423|gb|EDU06466.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018616|gb|EDU56656.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998234|gb|EDU67331.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660120|gb|EDX53500.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660951|gb|EDX54204.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249776|gb|EDY74556.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225379253|gb|EEH01618.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379936|gb|EEH02298.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 359 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 96/244 (39%), Positives = 138/244 (56%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG ES + L Y + E +K + +E+ G + +I Sbjct: 110 DDKNVIVEMRPAAGGDESSIFVGNLFDTYRAYTESNNWKMKIIEMTPNA-VGFSFISFMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y +K E GVHR+ R+ +S R HTS ++ V P D +++ I+ SD RIDT Sbjct: 169 SGEEVYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLPE-QDEVDVVINPSDLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 YRASGAGGQHVN T+SAVRITHIPTGVV CQ+ +SQ +N+ A MLRAKL+E + Q+ Sbjct: 228 YRASGAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQ 287 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E AN+ K ++G G +IR+Y P V D R ++ ++ G+LD+ + Sbjct: 288 NAEFANL---RKNQVGTGDRSEKIRTYNY-PQNRVTDHRISLTLNKLDQIMMGELDEIID 343 Query: 349 ATLA 352 A +A Sbjct: 344 ALIA 347 >gi|227877271|ref|ZP_03995344.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01] gi|256842834|ref|ZP_05548322.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN] gi|256848802|ref|ZP_05554236.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US] gi|262045800|ref|ZP_06018764.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US] gi|293381669|ref|ZP_06627650.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1] gi|295692623|ref|YP_003601233.1| peptide chain release factor 1 [Lactobacillus crispatus ST1] gi|312977646|ref|ZP_07789393.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05] gi|227863127|gb|EEJ70573.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01] gi|256614254|gb|EEU19455.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN] gi|256714341|gb|EEU29328.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US] gi|260573759|gb|EEX30315.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US] gi|290921716|gb|EFD98737.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1] gi|295030729|emb|CBL50208.1| Peptide chain release factor 1 [Lactobacillus crispatus ST1] gi|310895385|gb|EFQ44452.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05] Length = 362 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/283 (34%), Positives = 156/283 (55%), Gaps = 15/283 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+E+A EE+ I +E + +IK+ + L D D +E+ AGG E+ Sbjct: 76 LIEMAKEEN-SEIEKEIPELEDQIKILM-------LPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AQYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + V++G+LD+ + A + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALI 346 >gi|226360607|ref|YP_002778385.1| peptide chain release factor 1 [Rhodococcus opacus B4] gi|226239092|dbj|BAH49440.1| peptide chain release factor 1 [Rhodococcus opacus B4] Length = 359 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 113/281 (40%), Positives = 158/281 (56%), Gaps = 11/281 (3%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWA 134 L DD S E L+ LE++ K LL+ D +D LEV +G GG ES +A Sbjct: 69 LAADDSSFAAEVP-ALEEQVLELD-KTLTDLLAPRDPHDGDDVVLEVKSGEGGEESALFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----AYGWLKGEQGVHR 189 + L RMY R+AE+ ++ E L+ + G K ATL IK + LK E GVHR Sbjct: 127 SDLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS + + +YP ++ E++I E+D RID YR+SG GGQ VNTTDSA Sbjct: 187 VQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308 VRITH+PTG+VV CQ ERSQ +NKA+A +L A+L + + A+ G S+ + Sbjct: 247 VRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDR 306 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D R + + VLDG+LD + A Sbjct: 307 SERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDA 346 >gi|118619169|ref|YP_907501.1| peptide chain release factor 1 [Mycobacterium ulcerans Agy99] gi|166223575|sp|A0PUL1|RF1_MYCUA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118571279|gb|ABL06030.1| peptide chain release factor 1 PrfA [Mycobacterium ulcerans Agy99] Length = 357 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 138/235 (58%), Gaps = 7/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D++D LEV +G GG ES +A L RMY R+AE+ + L + G + ATL I Sbjct: 103 DADDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWTVTVLGETTSDLGGYRDATLAI 162 Query: 173 --KGPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 KG A G W +K E GVHR+ R+ +S R HTS + + VYP ++ E++I ESD Sbjct: 163 ASKGDTADGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESD 222 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A +L A+L + Sbjct: 223 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAI 282 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 ++ A+ +S+ + +IR+Y P V D R + + VLDG Sbjct: 283 AEERAMADASADRASQIRTVDRSERIRTYNF-PENRVTDHRIGYKSHNLDQVLDG 336 >gi|56751903|ref|YP_172604.1| peptide chain release factor 1 [Synechococcus elongatus PCC 6301] gi|81301012|ref|YP_401220.1| peptide chain release factor 1 [Synechococcus elongatus PCC 7942] gi|81561678|sp|Q5N0T6|RF1_SYNP6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361627|sp|Q31L36|RF1_SYNE7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56686862|dbj|BAD80084.1| peptide chain release factor RF-1 [Synechococcus elongatus PCC 6301] gi|81169893|gb|ABB58233.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus elongatus PCC 7942] Length = 368 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 90/243 (37%), Positives = 150/243 (61%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA LLRMY+R+AE + ++ + L GE G K A L I Sbjct: 112 DDKNIMLEIRAGTGGDEASLWAGDLLRMYSRYAESQGWRVKLLSESTGELGGYKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + Y LK E GVHR+ R+ ++ R HTS +++ + P VD+ +E+ I D + T Sbjct: 172 QGESVYSKLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDE-VEVSIDPKDIELTT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++LQ++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLQEQ 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E + ++++G G +IR+Y + + D R + S + VL+G++++ ++A Sbjct: 291 QEA--VSSMRRSQVGTGSRSEKIRTYNYKDNRAT-DHRLGL-NFSLNPVLEGEIEEVIQA 346 Query: 350 TLA 352 ++ Sbjct: 347 CIS 349 >gi|289678406|ref|ZP_06499296.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae FF5] Length = 219 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 93/211 (44%), Positives = 129/211 (61%), Gaps = 8/211 (3%) Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+R + E L ++GE G K ++G + YG LK E G HR+ R+ +S R HTS Sbjct: 1 ERRGGRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTS 60 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ Sbjct: 61 ACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQE 120 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG---RQIRSYVLQPYQ 321 ERSQHKN+A+A + L AKL + Q+ AN I K +G G +IR+Y P Sbjct: 121 ERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQG 176 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R N+ S +VL G +D ++ LA Sbjct: 177 RVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 207 >gi|299739044|ref|XP_001835016.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130] gi|298403596|gb|EAU86782.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130] Length = 345 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 146/240 (60%), Gaps = 10/240 (4%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A LE+ +G GG+ES +A LLRMY R A +R +K E +D ++ G+K + IKG Sbjct: 92 ALLELKSGVGGSESSLFAGDLLRMYQRLAVQRGWKAEIAAKNDTDDGGVKDVIMEIKGVG 151 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV---DDSIEIEISESDCRIDTY 233 AY L+ E GVHR+ R+ +S R HTS ++ V P+V D E D +I+ Sbjct: 152 AYDALRWESGVHRVQRVPATESKGRVHTSAVAVLVLPLVEENDTHGEDLFKMEDVKIEVM 211 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RA GAGGQHVN T+SAVR+THIP+G+ V Q ERSQH+N+ +A+ +LR++L + ++ + Sbjct: 212 RARGAGGQHVNRTESAVRLTHIPSGITVSMQDERSQHQNRRRAFQVLRSRLLDQKIHR-- 269 Query: 294 EIANIGESSKTEI-GWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349 E+A + + + G R +IR+Y P + V D R + T+ S VL+G+ L+DF+ A Sbjct: 270 EMAERRATRRNLVSGSDRSDKIRTYNF-PQERVTDHRIGLTLTNLSSVLEGEGLEDFIDA 328 >gi|257867023|ref|ZP_05646676.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30] gi|257873358|ref|ZP_05653011.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10] gi|257877101|ref|ZP_05656754.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20] gi|325568363|ref|ZP_08144730.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC 12755] gi|257801079|gb|EEV30009.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30] gi|257807522|gb|EEV36344.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10] gi|257811267|gb|EEV40087.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20] gi|325158132|gb|EGC70285.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC 12755] Length = 357 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 107/302 (35%), Positives = 169/302 (55%), Gaps = 19/302 (6%) Query: 56 ISFIKEIQDRLCDNLI--LLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEA 112 + IK+ ++ L +NL + E+A EE S L++ D L+ RIK+ + L Sbjct: 55 VEGIKDTEEMLGENLDAEMAEMAKEE--LSDLKKEKDVLEERIKILL-------LPKDPN 105 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L MY ++AE + +K E ++ + G K ++I Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQKYAENQGWKVEVMDANVTGIGGYKEVIMMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N + LK E G HR+ R+ +S R HTS +++ V P ++ +EI+I++ D R D Sbjct: 166 TGDNVFSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VEIDIADKDIRTDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQHVN T SAVR+TH+PTG+ V Q ERSQ KN+ +A +LRA++Y+ ++Q+ Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIAVAMQDERSQLKNREKAMKVLRARVYD-QMQQ- 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + K+ +G G +IR+Y P V D R + +L G LD+ + A Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|254412235|ref|ZP_05026010.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC 7420] gi|196181201|gb|EDX76190.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC 7420] Length = 371 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 108/339 (31%), Positives = 185/339 (54%), Gaps = 13/339 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILLELAL 77 Q L + DP + + +E + + + R L+ + K Q+ L +L+ A Sbjct: 15 QTFHELTRRLADPDIATDPVEVQRVAKARSSLEEVVITYELWKTAQEELTGARQILKEAN 74 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWAN 135 + + + + KLE K+ + LL D + LE+ AG GG E+ WA Sbjct: 75 GDGEMHEMASLEVEELQTKLEELEKRLKILLLPRDPNDDKNIMLEIRAGTGGDEASIWAG 134 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L+RMY+R+AE + ++ + L + G K A L I+G Y LK E GVHR+ R+ Sbjct: 135 DLVRMYSRYAETQNWRVKLLSESPADMGGFKEAILEIQGEQVYSKLKFEAGVHRVQRVPV 194 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS +++ V P VDD +EIE+ D + T R+ GAGGQ+VN ++AV + H Sbjct: 195 TEAGGRVHTSTATVAVMPEVDD-VEIEVDPKDLEVSTARSGGAGGQNVNKVETAVDLFHK 253 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+ + C +ERSQ +N+ +A +LRAKLYE++L++++E + ++++G G +I Sbjct: 254 PTGIRIFCTEERSQLQNRERALQILRAKLYEMKLREQQEA--VTSMRRSQVGTGSRSEKI 311 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y + + V D R + + S + +L+GD++ ++A + Sbjct: 312 RTYNYKDNR-VTDHRLS-QNYSLNSLLEGDIESVIQACI 348 >gi|168036672|ref|XP_001770830.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677889|gb|EDQ64354.1| predicted protein [Physcomitrella patens subsp. patens] Length = 376 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 93/252 (36%), Positives = 153/252 (60%), Gaps = 8/252 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S DS + LEV AG GG E+ WA L+RMY +++E+ ++ + + E+ G K Sbjct: 114 LPSDPLDSRNIMLEVRAGTGGDEAGIWAGDLVRMYQKFSERNNWRCSPVSCTEAEKGGYK 173 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 L I G Y LK E GVHR+ R+ +S R HTS +++ + P VD+ +E+ I Sbjct: 174 EFVLEITGERVYSKLKYESGVHRVQRVPATESQGRVHTSTATVAIMPEVDE-VEVVIDPK 232 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D + T R+ GAGGQ+VN ++A+ + H PTG+ + C +ERSQ KNK +A+ +LRAKLYE Sbjct: 233 DIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERSQLKNKIRAFQLLRAKLYE 292 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++L++++E I + ++++G G +IR+Y + + V D RT I + VL+G+L Sbjct: 293 IKLREQQE--TIRNARQSQVGTGARSEKIRTYNYKDNR-VSDHRTKI-NFDLTTVLNGEL 348 Query: 344 DDFMKATLAIKK 355 + +++ A+++ Sbjct: 349 EGPVQSCAALEQ 360 >gi|50286945|ref|XP_445902.1| hypothetical protein [Candida glabrata CBS 138] gi|49525208|emb|CAG58821.1| unnamed protein product [Candida glabrata] Length = 405 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 98/241 (40%), Positives = 139/241 (57%), Gaps = 10/241 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177 LE+ G GG+E+ +A LL MY +A +K+K + I + E +GI A L I P Sbjct: 148 LELRPGVGGSEAMIFAKDLLNMYIGYAHNKKWKHHIVSIRENEAGSGIMDAVLAIDEPGT 207 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD------SIEIEISESDCRID 231 Y LK E GVHR+ RI +S R HTS +++ V P + D + E + RID Sbjct: 208 YNILKYEAGVHRVQRIPATESKGRTHTSTAAVVVLPQLGDEGKDLDAFERSFKPEEIRID 267 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQ 290 RASG GGQHVNTT+SAVR+THIPTG+++ Q ERSQH+NKA+A+++LR+KL ELE Q Sbjct: 268 VKRASGKGGQHVNTTESAVRLTHIPTGIMIHMQDERSQHRNKAKAFSILRSKLAELEQQQ 327 Query: 291 KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349 K E+ + + T + +IR+Y + + D R + V+ G+ LDD + A Sbjct: 328 KAEKERQVRKEQVTTMDRSDKIRTYNFSQNR-ITDHRCGLNLYDLEGVISGERLDDVINA 386 Query: 350 T 350 Sbjct: 387 V 387 >gi|183984069|ref|YP_001852360.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M] gi|238690952|sp|B2HQL3|RF1_MYCMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183177395|gb|ACC42505.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M] Length = 357 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 101/235 (42%), Positives = 138/235 (58%), Gaps = 7/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D++D LEV +G GG ES +A L RMY R+AE+ + L + G K ATL I Sbjct: 103 DADDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWTVTVLGETTSDLGGYKDATLAI 162 Query: 173 --KGPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 KG A G W +K E GVHR+ R+ +S R HTS + + VYP ++ E++I ESD Sbjct: 163 ASKGDTADGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESD 222 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A +L A+L + Sbjct: 223 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAI 282 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 ++ A+ +S+ + +IR+Y P + D R + + VLDG Sbjct: 283 AEEQAMADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKSHNLDQVLDG 336 >gi|71894205|ref|YP_278313.1| peptide chain release factor 1 [Mycoplasma synoviae 53] gi|119361563|sp|Q4A6L9|RF1_MYCS5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71850993|gb|AAZ43602.1| peptide chain release factor 1 [Mycoplasma synoviae 53] Length = 359 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 102/242 (42%), Positives = 143/242 (59%), Gaps = 16/242 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AGG E+ +A L RMYT+W ++ K L++ G T I Sbjct: 110 DNKDVIVEIRGAAGGDEANIFAGDLYRMYTKWCQQNNMKLSTLDLSPAVSGGFTLVTFSI 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G AY LK E GVHR+ RI ++ R HTS +++ V P +DD IEIEI + D RID Sbjct: 170 QGEKAYSKLKFESGVHRVQRIPVTETKGRVHTSTATVTVMPEIDDDIEIEIKKEDLRIDV 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVRITH PTG+VV CQ+ +SQ +NK A +L++KLY+LELQK+ Sbjct: 230 FRSSGNGGQSVNTTDSAVRITHFPTGIVVSCQEGKSQIQNKDIAMRILKSKLYDLELQKK 289 Query: 293 E-------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + ++A G S+ +IR+Y P V D R TS + V++G L+ Sbjct: 290 QSEESGYRKLAGSGARSE-------KIRTYNY-PQDRVTDHRIGYS-TSLNYVMEGRLNP 340 Query: 346 FM 347 + Sbjct: 341 II 342 >gi|254424165|ref|ZP_05037883.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335] gi|196191654|gb|EDX86618.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335] Length = 367 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 95/244 (38%), Positives = 151/244 (61%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA LLR+Y+R+AE + +K L + G+K A + I Sbjct: 112 DDKNIMLEIRAGTGGDEAGIWAGDLLRLYSRYAEGQGWKANLLSESRADMGGVKEAIVEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ +S R HTS +++ V P VDD +EI I + + T Sbjct: 172 QGNQVYSKLKFESGVHRVQRVPLTESGGRVHTSTATVAVMPEVDD-VEIHIDPKEIVMTT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ-K 291 R+ GAGGQ+VN ++AV + H PTG+ V C +ERSQ +N+ +A +LRAKLYE++LQ + Sbjct: 231 ARSGGAGGQNVNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMKLQEQ 290 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 ++EI+++ K+++G G +IR+Y + + V D R N + P+ VL+GD++ ++ Sbjct: 291 KDEISSM---RKSQVGSGSRSEKIRTYNYKDNR-VTDHRLNQNFSLPA-VLEGDIETVVQ 345 Query: 349 ATLA 352 ++ Sbjct: 346 TCIS 349 >gi|302869596|ref|YP_003838233.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC 27029] gi|315503942|ref|YP_004082829.1| peptide chain release factor 1 [Micromonospora sp. L5] gi|302572455|gb|ADL48657.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC 27029] gi|315410561|gb|ADU08678.1| peptide chain release factor 1 [Micromonospora sp. L5] Length = 362 Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 95/245 (38%), Positives = 141/245 (57%), Gaps = 10/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG ES +A LLRMYTR+AE+ + TE ++ D + G+K +L I Sbjct: 101 DAKDVIVEIKAGEGGEESALFAGDLLRMYTRYAERHGWVTEVIDAQDSDLGGVKDVSLAI 160 Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K G + LK E GVHR+ R+ +S R HTS + + V P +D +++ I Sbjct: 161 KSKGVPEGGNGVWSRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAED-VDVTIDP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 ++ RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ QA +LRA+L Sbjct: 220 NELRIDVFRSSGPGGQSVNTTDSAVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARLL 279 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + A+ ++ + +IR+Y P + D R + L G+LD Sbjct: 280 AAAQEQADAAASDARKAQVRTVDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELD 338 Query: 345 DFMKA 349 + A Sbjct: 339 GVLDA 343 >gi|186684480|ref|YP_001867676.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102] gi|238691196|sp|B2ITM5|RF1_NOSP7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|186466932|gb|ACC82733.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102] Length = 365 Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 117/344 (34%), Positives = 185/344 (53%), Gaps = 19/344 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI-LLELALEE 79 Q + L + DP N E + + + R L+ ++ EI ++LI E+ E Sbjct: 15 QTFNELTRRLGDPDTASNPDEYQEIAKSRSSLEEVVNTY-EIWKTAQEDLIGAREVYKES 73 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLS------GEADSNDAYLEVHAGAGGTESQDW 133 LQE + +L+ +LE + + ES L D + LE+ AG GG E+ W Sbjct: 74 ASDPELQEMA-SLEVKELEEKIEHLESRLKVLLLPRDPNDEKNIMLEIRAGTGGDEASIW 132 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L++MYTR+A+ + +K + GE G K L IKG + Y LK E GVHR+ R+ Sbjct: 133 AGDLMQMYTRYAQTQGWKVSLVSESRGEMGGWKEVILEIKGNDVYSQLKFEAGVHRVQRV 192 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS +++ + P VDD +EI I D + T R+ GAGGQ+VN ++AV + Sbjct: 193 PATESGGRVHTSTATVAIMPEVDD-VEIHIDPKDIEMTTARSGGAGGQNVNKVETAVDLM 251 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+ + C +ERSQ +NK +A +LRAKLY+++L E+ A + ++++G G R Sbjct: 252 HKPTGIRIFCTEERSQLQNKERAMQILRAKLYDIKLG--EQQAAVTSMRRSQVGTGS--R 307 Query: 314 SYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLAI 353 S ++ Y KD R + S + VLDGDL+ +++ +++ Sbjct: 308 SEKIRTYNY-KDNRATDHRLGQNYSLTPVLDGDLETLIQSCISL 350 >gi|332877766|ref|ZP_08445507.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684346|gb|EGJ57202.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 357 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 151/260 (58%), Gaps = 6/260 (2%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 L+E+ + L +++ E++Y + D+ +A +E+ AG GG E+ +A L RMYT++ Sbjct: 81 LEESKERLPQLEEEIKYM---LIPKDPEDAKNAVMEIRAGTGGDEASIFAGDLYRMYTKY 137 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 + + + T ++ ++G G K + G N YG LK E GVHR+ R+ ++ R HT Sbjct: 138 CQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGVHRVQRVPQTETQGRVHT 197 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S +++ V P ++ ++E+ +D +I ++G GGQ VNTT SA+++ HIPTG+ V+CQ Sbjct: 198 SAATVIVLPEAEE-FDVELDMADVKIIRTTSTGPGGQSVNTTYSAIQLQHIPTGIEVRCQ 256 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMV 323 E+SQHKN +A +LR++LYE+EL K+ E + S G +IR+Y P V Sbjct: 257 DEKSQHKNLDKALKVLRSRLYEMELAKKMEADSARRKSMVSSGDRSAKIRTYNY-PQGRV 315 Query: 324 KDLRTNIEKTSPSDVLDGDL 343 D R + +V++GD+ Sbjct: 316 TDHRIGLTLYDLQNVINGDV 335 >gi|315038002|ref|YP_004031570.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112] gi|312276135|gb|ADQ58775.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112] gi|327183282|gb|AEA31729.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1118] Length = 362 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 98/283 (34%), Positives = 156/283 (55%), Gaps = 15/283 (5%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+E+A EE+ I +E + +IK+ + L D D +E+ AGG E+ Sbjct: 76 LIEMAKEEN-SEIEKEIPELEDQIKILM-------LPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + V++G+LD+ + A + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALI 346 >gi|330469860|ref|YP_004407603.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032] gi|328812831|gb|AEB47003.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032] Length = 362 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 95/245 (38%), Positives = 142/245 (57%), Gaps = 10/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG ES +A LLRMYTR+AE+R + TE ++ D + G+K +L I Sbjct: 101 DAKDVIVEIKAGEGGEESALFAGDLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAI 160 Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K G + LK E GVHR+ R+ +S R HTS + + V P ++ +++ I Sbjct: 161 KTKGVPEGGNGVWSRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEAEE-VDVTIDP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 ++ RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ QA +LRA+L Sbjct: 220 NELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRARLL 279 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ + A+ ++ + +IR+Y P + D R + L G+LD Sbjct: 280 AAAQEQADAAASDARKAQVRTVDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELD 338 Query: 345 DFMKA 349 + A Sbjct: 339 GVLDA 343 >gi|123969269|ref|YP_001010127.1| peptide chain release factor 1 [Prochlorococcus marinus str. AS9601] gi|229470358|sp|A2BTA9|RF1_PROMS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|123199379|gb|ABM71020.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. AS9601] Length = 364 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 120/348 (34%), Positives = 186/348 (53%), Gaps = 25/348 (7%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN-AISFIK------EIQDRLCDNLI 71 A + L + DP + + + + + RER L+ I F K EI+D NL Sbjct: 13 ASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED--SKNL- 69 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 L E +++ S++ E NL+ IK E+ K +LL + D LE+ AGAGG E+ Sbjct: 70 LKENRNDKEMESLINEELINLEEIKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + + + + G K + +KG + Y LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I D + T R+ GAGGQ+VN ++A+ Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEAD-PVEVKIDPIDLEVGTARSGGAGGQNVNKVETAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK--TEIGW 308 + H PTG+ V C QERSQ +N+ +A +LRAKLYE++L++ AN E S+ +++G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLSQVGT 304 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 G RS ++ Y KD RT + S +L G LD+ + A +A Sbjct: 305 GD--RSEKIRTYNF-KDNRTTDHRLGSNFSLEPILAGQLDEVIDACIA 349 >gi|116491555|ref|YP_811099.1| peptide chain release factor 1 [Oenococcus oeni PSU-1] gi|290891160|ref|ZP_06554222.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429] gi|116092280|gb|ABJ57434.1| bacterial peptide chain release factor 1 (bRF-1) [Oenococcus oeni PSU-1] gi|290479124|gb|EFD87786.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429] Length = 357 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 140/244 (57%), Gaps = 9/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ GG E+ +A LL MY +A+ + + E ++ GE G K A + I Sbjct: 106 DDKNIIMEIRGAVGGDEANLFAGDLLNMYAHYAQSQNWSFEIVDQTVGEAGGFKEAVINI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE--ISESDCRI 230 G N Y LK E G HR+ R+ ++ R HTS +++ V P +D I+ E I D R Sbjct: 166 SGENVYSKLKFESGAHRVQRVPVTETQGRVHTSTATVGVMPEFED-IDTEGLIDPKDVRE 224 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D YR+SGAGGQH+N T SAVR+ H+PTG+ V+ Q++RSQ +N+++AW +LR+++Y+ Q Sbjct: 225 DVYRSSGAGGQHINKTSSAVRLVHLPTGIKVEMQEQRSQQQNRSKAWQILRSRVYDHFAQ 284 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E + +T+IG G +IR+Y P V D R N V++GDL++ + Sbjct: 285 ENRE--QYDQQRRTKIGSGDRSERIRTYNF-PQNRVTDHRINFTLNKLDKVINGDLEEII 341 Query: 348 KATL 351 A + Sbjct: 342 DALI 345 >gi|228472858|ref|ZP_04057615.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC 33624] gi|228275440|gb|EEK14217.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC 33624] Length = 357 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 173/313 (55%), Gaps = 13/313 (4%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI--LLELALEEDDCSILQETSDN 91 L + E K LM +RQ I E ++ + +N+ + E+A + L+E + Sbjct: 33 QLTKEYKELKQLMDKRQEYITVTRNITEAEEIIKENIDPEMTEMARLQ-----LEEAKER 87 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 L +++ E+ +F + DS +A +E+ AG GG E+ +A L RMY+++ + + + Sbjct: 88 LPQLEEEI---KFLLIPKDPEDSKNAVMEIRAGTGGDEASIFAGDLYRMYSKYCQDKGWS 144 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 +++++G G K L + G + YG LK E GVHR+ R+ ++ R HTS +++ V Sbjct: 145 VSVMDMNEGTSGGFKEIILEVNGEDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMV 204 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P ++ ++E++ D +I ++G GGQ VNTT SA+++ HIPTG+ V+CQ E+SQHK Sbjct: 205 LPEAEE-FDVELNMEDVKIIRTTSTGPGGQSVNTTYSAIQLQHIPTGIEVRCQDEKSQHK 263 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNI 330 N +A +LR++LYE+EL K+ E + S G +IR+Y P V D R + Sbjct: 264 NLDKALKVLRSRLYEMELAKKMEADSARRKSMVSSGDRSAKIRTYNY-PQGRVTDHRIGL 322 Query: 331 EKTSPSDVLDGDL 343 ++++GD+ Sbjct: 323 TLYDLGNIMNGDI 335 >gi|167041537|gb|ABZ06286.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine microorganism HF4000_008B14] Length = 360 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 111/347 (31%), Positives = 182/347 (52%), Gaps = 14/347 (4%) Query: 10 LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 + +FD D + R + + P + + + + L RER L+ + + +L D Sbjct: 1 MPSIFDKLDPVLTRYNEIEEAMGRPEVATDFEQVQTLARERASLETLVDIAHRYR-KLAD 59 Query: 69 NLILLELALEED-DCSILQETSDNLQRIKLEVEYKQFE---SLLSGEA-DSNDAYLEVHA 123 L L+E D + + D L + +VE E +LL + D D +E+ + Sbjct: 60 EQGDLNALLQEGGDAELTKMAKDELDETEKQVEQLAEELKIALLPKDPNDDRDVIVEIRS 119 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG E+ +A+ L R YTR+A+ ++ + ++ + + G+ I+G A+ LK Sbjct: 120 GAGGNEASLFASDLYRAYTRYAQLHHWQVDVMDSNPSDLGGLNKIVFGIQGKGAFSRLKY 179 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHR+ R+ ++ R HTS +++ V D+ ++I+IS D RID + A G GGQ+V Sbjct: 180 ERGVHRVQRVPDTEAQGRIHTSTATVAVLARADE-VDIKISPDDLRIDIFHAGGHGGQNV 238 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N +AVRI + PTG+ V CQ ERSQ+KNK +A MLRAKLY+ E +K A E+ + Sbjct: 239 NKVATAVRIVYEPTGLTVICQDERSQYKNKTKAMAMLRAKLYDAEQEKI--AAERSETRR 296 Query: 304 TEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +++G +IR+Y P + D R ++DG+LDD + Sbjct: 297 SQVGNADRSEKIRTYNY-PQDRITDHRVGASFHGIPRIMDGELDDLI 342 >gi|291298828|ref|YP_003510106.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM 44728] gi|290568048|gb|ADD41013.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM 44728] Length = 367 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 115/334 (34%), Positives = 170/334 (50%), Gaps = 12/334 (3%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 S L + DP + + A+ + R L + E+ D + ++L E L DD Sbjct: 18 SELEKQLADPSIHADAALARRVGRRYAELSPIAACNAEL-DTVKEDLAAAE-ELAGDDPE 75 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E + +RI E L DS D +E+ AG GG ES +A LLRMY R Sbjct: 76 FAAEATALRERIPQLEEKLAELLLPRDPDDSRDVIIEIKAGEGGAESALFAADLLRMYLR 135 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIK-------GPNAYGWLKGEQGVHRLVRISPY 196 +AEK + E ++ + E G+K ++ +K G + +K E GVHR+ R+ Sbjct: 136 YAEKHGWVAEIMDSQESEMGGVKDVSVAVKTKGNPEGGHGVWSRMKFEGGVHRVQRVPVT 195 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS + + V P ++ +++EI+ + RID YR+SG GGQ VNTTDSAVRITHIP Sbjct: 196 ESQGRIHTSAAGVLVMPEAEE-VDVEINMHELRIDVYRSSGPGGQSVNTTDSAVRITHIP 254 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSY 315 TGVV CQ E+SQ +NK A +LRA+L + ++ E A S+ + ++R+Y Sbjct: 255 TGVVASCQNEKSQLQNKEAAMRILRARLLAAKQEEAEAAAGAARKSQVRTVDRSERVRTY 314 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R + V+ GD+D + A Sbjct: 315 NF-PQNRVTDHRIGYTSHNLDQVMQGDMDGVLDA 347 >gi|295425486|ref|ZP_06818179.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM 11664] gi|295064825|gb|EFG55740.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM 11664] Length = 362 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 89/243 (36%), Positives = 140/243 (57%), Gaps = 9/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE++ +K ++ E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAERQGWKVSMVDSEPTEVGGYKRVAIMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + ++I++ D R+D Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ E Q Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYETQN 287 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R++ K +G G +IR+Y P V D R + V++G+LD+ + Sbjct: 288 RDK---YDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIID 343 Query: 349 ATL 351 A + Sbjct: 344 ALI 346 >gi|116248645|gb|ABJ90461.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis] Length = 158 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 77/153 (50%), Positives = 108/153 (70%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+R+AE +K+K E + ++GE G K I G YG LK E GVHR+ R+ +S Sbjct: 1 MYSRYAEDKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQRVPETESQ 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V V ++ I+I+ +D ++DT+RASGAGGQHVN TDSA+R+THIPTGV Sbjct: 61 GRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIRLTHIPTGV 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 VV+CQ +RSQHKN+A+A ++L A+L + E +KR Sbjct: 121 VVECQDQRSQHKNRAKAMSVLAARLQQAEDEKR 153 >gi|295397091|ref|ZP_06807203.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563] gi|294974683|gb|EFG50398.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563] Length = 357 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 110/307 (35%), Positives = 169/307 (55%), Gaps = 19/307 (6%) Query: 51 HLDNAISFIKEIQDRLCDNLI--LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108 H + I I++ ++ L ++ + ELA EE L+E +R LE E K+ + Sbjct: 51 HYKDVIQAIEDTEELLAESSDDEMTELAKEE-----LKEL--KAERESLEEEIKRL-MIP 102 Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S D + +E+ AGG E+Q +A L MY+R+A + ++ E +E + G K Sbjct: 103 SDPNDDKNIIMEIRGAAGGDEAQLFAGDLYEMYSRYATSQGWRVEVIESSSNDIGGFKEI 162 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 TL I+G Y LK E G HR+ R+ +S R HTS +++ V P ++D I+ ++ E D Sbjct: 163 TLQIQGDKVYSKLKFESGAHRVQRVPDTESQGRVHTSTATVGVMPELED-IDFDLDEGDI 221 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-L 287 RID YRASGAGGQHVN T SAVR+TH PTG+ V Q +RSQ +NK +A +LR+++YE + Sbjct: 222 RIDIYRASGAGGQHVNKTSSAVRLTHEPTGIQVAMQDQRSQQQNKDKAMMILRSRVYEKI 281 Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +++ E + K +G G +IR+Y P V D R + ++ G+LD Sbjct: 282 ASEQQNEYDS---QRKNLVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDRIMTGELD 337 Query: 345 DFMKATL 351 + + A L Sbjct: 338 EIVDALL 344 >gi|328957995|ref|YP_004375381.1| peptide chain release factor 1 [Carnobacterium sp. 17-4] gi|328674319|gb|AEB30365.1| peptide chain release factor 1 [Carnobacterium sp. 17-4] Length = 358 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 92/244 (37%), Positives = 138/244 (56%), Gaps = 7/244 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D + +E+ AGG E+Q +A L MY ++A+ + ++TE L+ + G K TL Sbjct: 104 ENDDRNIIMEIRGAAGGDEAQLFAGTLFNMYQKYADAQGWRTEVLDANITGIGGYKEITL 163 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 +I G N Y LK E G HR+ R+ +S R HTS +++ V P ++ +E+ + + D R Sbjct: 164 MITGDNVYSKLKYENGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VELNLPDKDIRT 222 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D Y ASGAGGQHVN T SAVR+TH+PTG+ V Q ERSQ KN+ +A +LRA++Y+ Q Sbjct: 223 DIYHASGAGGQHVNKTASAVRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHIQQ 282 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + + K+ +G G +IR+Y P V D R + +L G LD+ + Sbjct: 283 AAQ--SEYDAERKSAVGTGDRSERIRTYNY-PQSRVTDHRIGLTIQKLDQILSGKLDEII 339 Query: 348 KATL 351 A + Sbjct: 340 DALI 343 >gi|227892680|ref|ZP_04010485.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM 16047] gi|227865551|gb|EEJ72972.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM 16047] Length = 362 Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 88/242 (36%), Positives = 138/242 (57%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE++ +K ++ E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + ++I+I D R+D Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQN 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A K +G G +IR+Y P V D R + V++G+LD+ + A Sbjct: 288 Q--AKYDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDA 344 Query: 350 TL 351 + Sbjct: 345 LI 346 >gi|259046347|ref|ZP_05736748.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175] gi|259036984|gb|EEW38239.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175] Length = 359 Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 115/347 (33%), Positives = 184/347 (53%), Gaps = 12/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD D+ + R L+ DP + + L +E +L + K Q + + D Sbjct: 1 MFDQLDSFIIRYDELSELLSDPEVIGDTKRFMELTKEEANLRPKVETFKRYQQVVEEISD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 +L +L+ + + +E +L++ K+E+E K +F L D + +E+ AGG Sbjct: 61 TEEMLGESLDAEMAEMAKEELSSLKKEKVELEDKIKFLLLPEDPNDGKNIIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LL MY ++AE + ++ E ++ + G K L+I G N + LK E G Sbjct: 121 DEAALFAGDLLTMYQKYAESQGWRVEVMDANVTGIGGYKEVILMITGDNVFSKLKYESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIE+ + D R+D Y ASGAGGQHVN T Sbjct: 181 HRVQRVPSTESQGRVHTSTATVVVMPEAE-EVEIELEDKDIRVDIYHASGAGGQHVNKTA 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ Q E + + K+ +G Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDKISQ--EAQSEYDANRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + VL G +D+ + A + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDQVLAGKIDEIVDALI 343 >gi|315641825|ref|ZP_07896829.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952] gi|315482500|gb|EFU73039.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952] Length = 357 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 90/240 (37%), Positives = 140/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L MY R+AE + ++ E ++ + G K ++I Sbjct: 106 DDKNIIMEIRGAAGGDEAALFAGDLFNMYQRYAESQGWRVEVMDANITGIGGYKEVIMMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N + LK E G HR+ R+ +S R HTS +++ V P ++ +E+++++ D R+D Sbjct: 166 TGDNVFSKLKYESGAHRVQRVPSTESQGRIHTSTATVVVMPEAEE-VELDLADKDIRVDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQHVN T SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ +LQ Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD-QLQ-H 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + K+ +G G +IR+Y P V D R + +L G LD+ + A Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDA 341 >gi|298491428|ref|YP_003721605.1| peptide chain release factor 1 ['Nostoc azollae' 0708] gi|298233346|gb|ADI64482.1| peptide chain release factor 1 ['Nostoc azollae' 0708] Length = 364 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 91/243 (37%), Positives = 145/243 (59%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA LLRMY+R+A+ + +K + + GE G K L I Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLLRMYSRYADTQGWKVKLVSQSLGEMGGFKEVILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ +S R HTS ++I + P VDD +EI I D + T Sbjct: 172 QGDRVYSKLKFEAGVHRVQRVPATESGGRVHTSTATIAIMPEVDD-VEIHIDPKDIEMST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++A + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L+++ Sbjct: 231 ARSGGAGGQNVNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQ 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E + ++++G G +IR+Y + ++ N +P VL+GDL+ +++ Sbjct: 291 QEA--VTSMRRSQVGTGSRSEKIRTYNYKDSRVTDHRLGNNFTLNP--VLEGDLETIVQS 346 Query: 350 TLA 352 ++ Sbjct: 347 CIS 349 >gi|255559292|ref|XP_002520666.1| peptide chain release factor, putative [Ricinus communis] gi|223540051|gb|EEF41628.1| peptide chain release factor, putative [Ricinus communis] Length = 370 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 107/341 (31%), Positives = 178/341 (52%), Gaps = 31/341 (9%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ K DP + N E + L + LD +S + +D C E LEE Sbjct: 22 LSVKLADPDVVSNPTEYQKLAQSVAELDQVVSVYRRFKD--C------EKQLEETKALAK 73 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA-------------DSNDAYLEVHAGAGGTESQD 132 +E +D + +E + L G D+ + LEV AG GG E+ Sbjct: 74 EEGTDEDMAEMIALEIDSLSTELKGLEEKLKVLLLPSDPLDARNIMLEVRAGTGGDEAGL 133 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA L+RMY ++ E+ +K + + E+ G K+ + +KG Y LK E GVHR+ R Sbjct: 134 WAGDLVRMYEKYCEQNSWKYAIVSCSEAEKGGYKTYVMEVKGNRVYSKLKYESGVHRVQR 193 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ + P D+ +E+ I D + T R+ GAGGQ+VN ++AV + Sbjct: 194 VPQTETQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKVETAVDL 252 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H PTG+ + C +ER+Q +NK +A +LRAKLYE+++++++E +I K ++G G Sbjct: 253 FHKPTGIRIFCTEERTQLQNKTRALQLLRAKLYEMKVREQQE--SIRNQRKLQVGTGARA 310 Query: 310 RQIRSYVLQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y + ++ L+ N E TS L GD+++ ++A Sbjct: 311 EKIRTYNYKDNRVTDHRLKMNFELTS---FLQGDIENAVQA 348 >gi|209554361|ref|YP_002284416.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|238054476|sp|B5ZAH6|RF1_UREU1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|209541862|gb|ACI60091.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 359 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/243 (39%), Positives = 137/243 (56%), Gaps = 10/243 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG ES + L Y + E +K + +E+ G + +I Sbjct: 110 DDKNVIVEMRPAAGGDESSIFVGNLFDTYRAYTESNNWKMKIIEMTPNA-VGFSFISFMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y +K E GVHR+ R+ +S R HTS ++ V P D +++ I+ SD RIDT Sbjct: 169 SGEEVYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLPE-QDEVDVVINPSDLRIDT 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 YRASGAGGQHVN T+SAVRITHIPTGVV CQ+ +SQ +N+ A MLRAKL+E + Q+ Sbjct: 228 YRASGAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQ 287 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 E AN+ K ++G G +IR+Y P V D R ++ ++ G+LD+ + Sbjct: 288 NAEFANL---RKNQVGTGDRSEKIRTYNY-PQNRVTDHRISLTLNKLDQIMMGELDEIID 343 Query: 349 ATL 351 A + Sbjct: 344 ALI 346 >gi|162447071|ref|YP_001620203.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A] gi|226739094|sp|A9NEP7|RF1_ACHLI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|161985178|gb|ABX80827.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A] Length = 354 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 92/235 (39%), Positives = 134/235 (57%), Gaps = 7/235 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E +A L +MY+++AE +K + G G +I Sbjct: 104 DDKNVIIEIKGAAGGDEGNIFAGDLFKMYSKYAESMGWKVTLVNTTPGSSGGFAGIEFII 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G NA+ +LK E GVHR+ R+ +S R HTS + + P +D IE ++ D R DT Sbjct: 164 SGENAFSYLKHESGVHRVQRVPETESQGRIHTSTAVVLALPEQED-IEYDVKWEDIRFDT 222 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y +SGAGGQ VNTT SAVR+THIPT VVV Q+ERSQH NK +A+ +L ++Y+ ++Q+ Sbjct: 223 YNSSGAGGQSVNTTYSAVRLTHIPTNVVVTSQEERSQHANKDRAYKLLVTRIYD-KIQQ- 280 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 E++ GES K IG G +IR+Y P V D R + +++G +D Sbjct: 281 EQLEKEGESRKALIGRGNRSEKIRTYNY-PQNRVTDHRIGLTINRLDAIMEGRID 334 >gi|116326889|ref|YP_796609.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329879|ref|YP_799597.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282347|sp|Q04W81|RF1_LEPBJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|122285261|sp|Q056R9|RF1_LEPBL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116119633|gb|ABJ77676.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123568|gb|ABJ74839.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 354 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/234 (40%), Positives = 140/234 (59%), Gaps = 7/234 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AG GG E+ + L RMY+++A+K+K K+E ++ G+K ++ AY Sbjct: 109 VEIRAGTGGEEAGLFVADLFRMYSKFADKQKIKSEIIDSAPTGIGGLKEIIFALEDERAY 168 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 K E G HR+ RI +S R HTS ++ V P D+ +E+D RID YR+SGA Sbjct: 169 DLFKFEGGTHRVQRIPSTESGGRIHTSAVTVAVLPEADEEEIEI-NENDLRIDVYRSSGA 227 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAVRITHIPTGVVV CQ E+SQHKNKA+A +L A++ E + + +++ ++ Sbjct: 228 GGQHVNTTDSAVRITHIPTGVVVACQDEKSQHKNKAKALRILSARILEKQTEDKKQASDA 287 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K IG G ++R+Y P D R + S +++GDL++ + A Sbjct: 288 --IKKQMIGSGDRSERVRTYNF-PQGRCTDHRIGFTSHNLSAIMEGDLEELIGA 338 >gi|328788515|ref|XP_001119866.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Apis mellifera] Length = 354 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 88/200 (44%), Positives = 123/200 (61%), Gaps = 6/200 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ G GG E+ +A LL MY ++ F E LEI E G++ AT+LI NA+ Sbjct: 100 MEIVPGVGGQEAMLFAKDLLNMYIKYFNHIGFNYEILEILSNELNGLRKATVLISDNNAF 159 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E GVHR+ RI + + R HTS + + + P D ++I++ + D I++ +ASGA Sbjct: 160 KKLKYEGGVHRVQRIPATEKSGRLHTSTAVVTILPEPKD-VDIKLEDKDLIIESKKASGA 218 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSA+RITHIPTG +V CQ RSQ KNK A L++ LYE EL K +++ I Sbjct: 219 GGQHVNTTDSAIRITHIPTGTIVTCQTNRSQIKNKQIALTKLKSLLYEEELNK--QVSFI 276 Query: 299 GESSKTEIG---WGRQIRSY 315 + K +IG +IR+Y Sbjct: 277 NQIRKKQIGKRLRNEKIRTY 296 >gi|333029894|ref|ZP_08457955.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011] gi|332740491|gb|EGJ70973.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011] Length = 361 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 87/241 (36%), Positives = 136/241 (56%), Gaps = 17/241 (7%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A +E+ AG GG E+ +A L RMY+++ E + + E ++G G K + Sbjct: 111 DERNAIMEIRAGTGGDEAALFAGDLFRMYSKYCENKGWTVEINNFNEGTAGGFKEIVFSV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ +S R HTS ++ V P ++ +++E++ +D + T Sbjct: 171 SGDNVYGILKYESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDVELNPADIELQT 229 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK- 291 R+ GAGGQHVN ++ V +TH PTG+VV CQ+ RSQH N+ +A +LR+KLYE+E +K Sbjct: 230 ARSGGAGGQHVNKVETKVMLTHKPTGLVVICQEGRSQHSNREKAMQILRSKLYEIEYEKA 289 Query: 292 -------REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 R+ + + G+ S +IR+Y P + D R N + +DGD+ Sbjct: 290 NKERSEQRKSLVSTGDRSA-------KIRTYNY-PQGRITDHRINYTIYNLQAFMDGDIQ 341 Query: 345 D 345 D Sbjct: 342 D 342 >gi|78780006|ref|YP_398118.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9312] gi|119361576|sp|Q318L3|RF1_PROM9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78713505|gb|ABB50682.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus marinus str. MIT 9312] Length = 364 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 118/348 (33%), Positives = 187/348 (53%), Gaps = 25/348 (7%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN-AISFIK------EIQDRLCDNLI 71 A + L + DP + + + + + RER L+ I F K EI+D NL Sbjct: 13 ASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED--SKNL- 69 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 L E +++ S++ E NL+ K ++ K +LL + D LE+ AGAGG+E+ Sbjct: 70 LKENRNDKEMESLINEELINLEECKNQLIQKTTIALLPKDPRDERSVMLEIRAGAGGSEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + + + + G K + +KG + Y LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I +D + T R+ GAGGQ+VN ++A+ Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEAD-PVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK--TEIGW 308 + H PTG+ V C QERSQ +N+ +A +LRAKLYE++L++ AN E S+ +++G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLSQVGT 304 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 G RS ++ Y KD RT + S +L G LD+ + A +A Sbjct: 305 GD--RSEKIRTYNF-KDNRTTDHRLGSNFSLEPILAGQLDEVIDACIA 349 >gi|58337080|ref|YP_193665.1| peptide chain release factor 1 [Lactobacillus acidophilus NCFM] gi|227903648|ref|ZP_04021453.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC 4796] gi|75432974|sp|Q5FKZ0|RF1_LACAC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|58254397|gb|AAV42634.1| peptide chain release factor I [Lactobacillus acidophilus NCFM] gi|227868535|gb|EEJ75956.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC 4796] Length = 361 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE++ + ++ E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAERQNWNVSMIDSEPTEVGGYKRVAIMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + ++I+I D R+D Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDIDIDPKDIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQN 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A K +G G +IR+Y P V D R + V++G+LD+ + A Sbjct: 288 Q--AQYDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIIDA 344 Query: 350 TL 351 + Sbjct: 345 LI 346 >gi|282898327|ref|ZP_06306318.1| Peptide chain release factor 1 [Raphidiopsis brookii D9] gi|281196858|gb|EFA71763.1| Peptide chain release factor 1 [Raphidiopsis brookii D9] Length = 364 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 147/244 (60%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA LLRMY+R+A+ + +K + + GE G K L I Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLLRMYSRYADTQGWKVKLVSESPGEMGGFKEVILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + Y LK E GVHR+ R+ ++ R HTS +++ + P VDD +E+ I D + T Sbjct: 172 QGNSVYSKLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDD-VEVHIDPKDIEMTT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L+++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQ 290 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348 +E + ++++G G RS ++ Y KD R + + S VL+GDL+ ++ Sbjct: 291 QEA--VTSMRRSQVGTGS--RSEKIRTYNY-KDSRATDHRLGQNFTLSPVLEGDLEILIQ 345 Query: 349 ATLA 352 + ++ Sbjct: 346 SCIS 349 >gi|157414134|ref|YP_001485000.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9215] gi|238686831|sp|A8G733|RF1_PROM2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157388709|gb|ABV51414.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9215] Length = 364 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 120/346 (34%), Positives = 189/346 (54%), Gaps = 27/346 (7%) Query: 23 LSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDN-AISFIK------EIQDRLCDNLILL 73 +SF N + + DP + + + + + RER L+ I F K EI+D NL L Sbjct: 15 VSFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED--SKNL-LK 71 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132 E +++ S++ E L+ K E+ K +LL + D LE+ AGAGG+E+ Sbjct: 72 ENRNDKEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGSEACI 131 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA L RMY R+ +K + +++ + + G K + +KG + Y LK E GVHR+ R Sbjct: 132 WAGDLARMYERYGQKVGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQR 191 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P D +E++I +D I T R+ GAGGQ+VN ++A+ + Sbjct: 192 VPATESQGRVHTSTATVAVMPEAD-PVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDL 250 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK--TEIGWGR 310 H PTG+ V C QERSQ +N+ +A +LRAKLYE++L++ AN E S+ +++G G Sbjct: 251 LHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLSQVGTGD 306 Query: 311 QIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 RS ++ Y KD RT + S +L G LD+ + A +A Sbjct: 307 --RSEKIRTYNF-KDNRTTDHRLGSNFSLEPILAGQLDEVINACIA 349 >gi|218459801|ref|ZP_03499892.1| peptide chain release factor 1 [Rhizobium etli Kim 5] Length = 230 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/219 (40%), Positives = 135/219 (61%), Gaps = 8/219 (3%) Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY R+A ++ +K E L +GE G K I G + LK E GVHR+ R+ Sbjct: 3 LFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPET 62 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P ++ I+IEI D RIDT R+SGAGGQHVNTTDSAVRITH+P Sbjct: 63 EAGGRIHTSAATVAVLPEAEE-IDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLP 121 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 +G+VV E+SQH+N+A+A +LR++LY+ E Q+ + + K+++G G +IR Sbjct: 122 SGIVV-TSSEKSQHQNRAKAMQVLRSRLYDAERQRAD--SERSADRKSQVGSGDRSERIR 178 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +Y P V D R N+ +++G++++ + A +A Sbjct: 179 TYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 216 >gi|294659861|ref|XP_002770657.1| DEHA2G17204p [Debaryomyces hansenii CBS767] gi|199434289|emb|CAR65990.1| DEHA2G17204p [Debaryomyces hansenii] Length = 411 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 103/256 (40%), Positives = 144/256 (56%), Gaps = 17/256 (6%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLS 109 LDN + EI++ LLE+ EE+D ++ E S+ L+ + +V K +S L Sbjct: 87 LDNYHKYQHEIENLQS----LLEILHEEEDAEMVHEASNELKEVIPKVFNFTKVLQSRLL 142 Query: 110 GEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 +D A LE+ G GG+E+ +A LL MY +A K+K + G + Sbjct: 143 PPVTHSDRPAMLELRPGVGGSEAALFAGDLLNMYINFANHMKWKWTMISESHGNNGSVNE 202 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-- 225 A + I P AY L+ E GVHR+ RI ++ R HTS +++ V P + + E + + Sbjct: 203 AIISIDNPGAYSILRHESGVHRVQRIPSTETKGRIHTSTAAVVVLPKMSEGTESSLKDDE 262 Query: 226 -----SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + RIDT RA G GGQHVNTTDSAVR+THIPTG+ VQ Q ERSQ KNKA+A+++L Sbjct: 263 RQFQPGEVRIDTMRAGGKGGQHVNTTDSAVRLTHIPTGIQVQQQDERSQPKNKAKAFSIL 322 Query: 281 RAKLYELELQKREEIA 296 RA+L LE K EIA Sbjct: 323 RARLAALERDK--EIA 336 >gi|282899982|ref|ZP_06307943.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii CS-505] gi|281195252|gb|EFA70188.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii CS-505] Length = 364 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 147/244 (60%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA LLRMY+R+A+ + ++ + + GE G K L I Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESPGEMGGFKEVILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + Y LK E GVHR+ R+ ++ R HTS +++ + P VDD +E+ I D + T Sbjct: 172 QGDSVYSKLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDD-VEVHIDPKDIEMTT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L+++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQ 290 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348 +E + ++++G G RS ++ Y KD R + + S VL+GDL+ ++ Sbjct: 291 QEA--VTSMRRSQVGTGS--RSEKIRTYNY-KDSRATDHRLGQNFTLSPVLEGDLETLIQ 345 Query: 349 ATLA 352 + ++ Sbjct: 346 SCIS 349 >gi|116629883|ref|YP_815055.1| peptide chain release factor 1 [Lactobacillus gasseri ATCC 33323] gi|238853674|ref|ZP_04644042.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4] gi|282851601|ref|ZP_06260966.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1] gi|311110481|ref|ZP_07711878.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22] gi|122273179|sp|Q042K5|RF1_LACGA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116095465|gb|ABJ60617.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus gasseri ATCC 33323] gi|238833712|gb|EEQ25981.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4] gi|282557569|gb|EFB63166.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1] gi|311065635|gb|EFQ45975.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22] Length = 362 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%) Query: 57 SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR--IKLEVEYKQFESLLSGEADS 114 S IKEI D N ++ ++D + +E + L++ KLE E K L D Sbjct: 56 SDIKEIDD----NKEIISSESDDDLVEMAKEENSELEKEVAKLEDEIKIL-MLPKDPNDD 110 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 D +E+ AGG E+ +A LLRMY ++AE + +K ++ E G K ++I G Sbjct: 111 KDIIMEIRGAAGGDEASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITG 170 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 Y LK E G HR+ R+ +S R HTS +++ V P + ++I++ D R+D YR Sbjct: 171 DKVYSKLKYENGAHRVQRVPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDVYR 229 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKRE 293 +SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ E Q R+ Sbjct: 230 SSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRD 289 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + K +G G +IR+Y P V D R + V++G+LD+ + A Sbjct: 290 K---YDAKRKDAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIINA 344 >gi|332687009|ref|YP_004456783.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311] gi|332371018|dbj|BAK21974.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311] Length = 358 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 114/331 (34%), Positives = 180/331 (54%), Gaps = 26/331 (7%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI--LLELALEEDDC 82 FL E+ +L + V ++ R +Q I IK+ ++ L ++L +LE+A EE Sbjct: 31 FLKLSKEEANLRETV---EVYRRYKQ----VIQGIKDTEELLGESLESEMLEMAKEE--L 81 Query: 83 SILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 S L++ + L RIK+ + L D + +E+ AGG E+ +A L MY Sbjct: 82 SELKQEKEVLGDRIKILL-------LPKDPNDDKNIIMEIRGAAGGDEAALFAGNLFSMY 134 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 ++AE + +K E ++ + G K ++I G N + LK E G HR+ R+ +S R Sbjct: 135 QKYAELQGWKIEVMDANITGIGGYKEVIMMITGENVFSKLKYESGAHRVQRVPSTESQGR 194 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P ++ +EI++ + D R D Y ASGAGGQH+N T SAVR+TH+PTG+VV Sbjct: 195 IHTSTATVVVMPEAEE-VEIDLEDKDIRTDIYHASGAGGQHINKTASAVRLTHLPTGIVV 253 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 Q ERSQ KN+ +A +LR ++Y+ +LQ+ + A + K+ +G G +IR+Y Sbjct: 254 AMQDERSQLKNREKAMKILRTRVYD-QLQQEAQSAYDAD-RKSAVGTGDRSERIRTYNF- 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R + VL G LD+ + A Sbjct: 311 PQNRVTDHRIGLTLQKLDQVLSGKLDEIIDA 341 >gi|171911189|ref|ZP_02926659.1| peptide chain release factor 1 [Verrucomicrobium spinosum DSM 4136] Length = 358 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 110/335 (32%), Positives = 177/335 (52%), Gaps = 16/335 (4%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLELALE 78 R S L P+ + + +A L+RE + L+ + E Q ++ DN ELA Sbjct: 13 RFSELEEMMGHPNFYDDNRKAGDLLREHRSLEALVKAWSEYQRTEQQIADNQ---ELAKS 69 Query: 79 EDDCSILQETS--DNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWAN 135 D LQ LE+E + +L + + D +E+ AG GG E+ +A Sbjct: 70 GDAELAALAEEELPTLQARLLELEGEVQRHILPPDPLEGRDVIMEIRAGTGGDEAAIFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY R+AE+R +K E++E + G K + G + + LK E GVHR+ R+ Sbjct: 130 DLYRMYNRYAEERGWKIESMEASPSDAGGYKEVVFKVSGEDVFRTLKYESGVHRVQRVPA 189 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS +++ V P ++ +++++ + RI+ RASG GGQ VNTTDSAV++ H+ Sbjct: 190 TEAQGRIHTSAATVAVLPEAEE-VDLQLKPDELRIEVCRASGHGGQGVNTTDSAVQVMHL 248 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG++V+CQ RSQ KNK +A ++R++L LE +++EE A K IG G +I Sbjct: 249 PTGMIVRCQDGRSQLKNKEKAITIMRSRL--LEKKQQEEAAKYSAHRKALIGGGGREEKI 306 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 R+Y P + D R ++ + +DG + D + Sbjct: 307 RTYNY-PQNRITDHRIDVTLYNLDMFVDGRIGDLV 340 >gi|284992528|ref|YP_003411082.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM 43160] gi|284065773|gb|ADB76711.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM 43160] Length = 363 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 118/338 (34%), Positives = 175/338 (51%), Gaps = 28/338 (8%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T+ DP + + A+ L R L + K D + D+L L ++D S Sbjct: 26 LETELADPAVHADASRARRLGRRYAQLAPLVE-TKRALDAVRDDLAAAR-ELADEDASFA 83 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E + QR+ E+E ++ SLL E D D LE+ AG GG ES +A LLRMY R Sbjct: 84 AEAAALEQRVP-ELE-ERLRSLLVPEDPDDDKDVILEIKAGEGGAESALFAGDLLRMYLR 141 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG-W--LKGEQGVHRLVRISPYDSNS 200 +AE+R + TE L+ + G K + +K + G W LK E GVHR+ R+ +S Sbjct: 142 YAERRGWATEVLDAVPADLGGYKDVAIAVKSRSDEGIWSRLKFEGGVHRVQRVPVTESQG 201 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS + V P ++ +++ + +D RID +R+SG GGQ VNTTDSAVRITH+PTG+V Sbjct: 202 RIHTSAVGVLVLPEAEE-VDVTVDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIV 260 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELEL---------QKREEIANIGESSKTEIGWGRQ 311 V Q E+SQ +N+ A +LR++L Q+R ++ + S + Sbjct: 261 VSSQNEKSQLQNRESALRVLRSRLLAAARDEAAAAASDQRRSQVRTVDRSER-------- 312 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +R+Y P + D R + + VLDG+LD + A Sbjct: 313 VRTYNF-PESRISDHRVGFKAHNLDQVLDGELDPVIDA 349 >gi|296128915|ref|YP_003636165.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109] gi|296020730|gb|ADG73966.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109] Length = 392 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/247 (40%), Positives = 146/247 (59%), Gaps = 9/247 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LE+ AG GG ES +A LLRMYTR+AE++ + + L+ + + G+K A + + Sbjct: 131 DGRDVILEIKAGEGGEESALFAGDLLRMYTRYAERQGWSVQVLDATESDLGGVKDAQVAV 190 Query: 173 K----GPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K GP G W LK E GVHR+ R+ +S R HTS + + V+P DD +++I + Sbjct: 191 KARAAGPPEDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVMVFPEADDDGDVDIDQ 250 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ QA +LRA+L Sbjct: 251 NDLRIDVYRSSGPGGQSVNTTDSAVRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLL 310 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ A+ S+ + +IR+Y P + D RT + + VLDGDL Sbjct: 311 AARQEEAAAAASEARRSQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDQVLDGDLG 369 Query: 345 DFMKATL 351 + + + Sbjct: 370 PVIASAV 376 >gi|170114318|ref|XP_001888356.1| predicted protein [Laccaria bicolor S238N-H82] gi|164636668|gb|EDR00961.1| predicted protein [Laccaria bicolor S238N-H82] Length = 338 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 100/253 (39%), Positives = 147/253 (58%), Gaps = 8/253 (3%) Query: 104 FESLLSGEADSN--DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 F SLL + ++ A +E+ +G GG+ES + LLRMY R A ++K + + +D + Sbjct: 70 FPSLLVPPSTTSHLSALMEMKSGVGGSESSLFLGDLLRMYQRLANVNRWKAQVVAQNDND 129 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV---DDS 218 G K A + IKG AY L+ E GVHR+ R+ +S+ R HTS SI V P+V D Sbjct: 130 GGGTKDAIIEIKGDGAYDALRFESGVHRVQRVPATESSGRVHTSTVSIVVLPLVEETDTQ 189 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 E S SD +++ RA GAGGQHVN T+SAVR+THIPTG+ V Q ERSQH+N+ +A+ Sbjct: 190 AEELFSMSDIKLEVMRARGAGGQHVNKTESAVRLTHIPTGITVSMQDERSQHQNRRRAFQ 249 Query: 279 MLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +LR++L + +L + EE + + +IR+Y + V D R + + S Sbjct: 250 VLRSRLLDKKLTREMEERRDTRRNLVRGADRSEKIRTYNF-VQERVTDHRIGLTLMNLSS 308 Query: 338 VLDGD-LDDFMKA 349 VL+GD + DF+ A Sbjct: 309 VLEGDGIQDFIDA 321 >gi|254526537|ref|ZP_05138589.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9202] gi|221537961|gb|EEE40414.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9202] Length = 364 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 120/346 (34%), Positives = 188/346 (54%), Gaps = 27/346 (7%) Query: 23 LSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDN-AISFIK------EIQDRLCDNLILL 73 +SF N + + DP + + + + + RER L+ I F K EI+D NL L Sbjct: 15 VSFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED--SKNL-LK 71 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132 E +++ S++ E L+ K E+ K +LL + D LE+ AGAGG E+ Sbjct: 72 ENRNDKEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEACI 131 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA L RMY R+ +K + +++ + + G K + +KG + Y LK E GVHR+ R Sbjct: 132 WAGDLARMYERYGQKIGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQR 191 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P D +E++I +D I T R+ GAGGQ+VN ++A+ + Sbjct: 192 VPATESQGRVHTSTATVAVMPEAD-PVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDL 250 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK--TEIGWGR 310 H PTG+ V C QERSQ +N+ +A +LRAKLYE++L++ AN E S+ +++G G Sbjct: 251 LHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLSQVGTGD 306 Query: 311 QIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 RS ++ Y KD RT + S +L G LD+ + A +A Sbjct: 307 --RSEKIRTYNF-KDNRTTDHRLGSNFSLEPILAGQLDEVINACIA 349 >gi|226226590|ref|YP_002760696.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27] gi|226089781|dbj|BAH38226.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27] Length = 356 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 95/240 (39%), Positives = 146/240 (60%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D A +E+ AG GG E+ +A LLRMYTR+ E+R ++ E + +G G+K + + Sbjct: 109 DERPAIVEIRAGTGGDEAGLFAGDLLRMYTRFLERRGWRIEPISYSEGTLGGVKESVFKV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +G L+ E GVHR+ R+ +S R HTS +++ V P ++ +++ I + D RID Sbjct: 169 SGDGVFGVLRWESGVHRVQRVPATESQGRIHTSAATVAVLPEAEE-LDMRIEDKDLRIDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG GGQ VNTTDSAVRITHIPTG+VV Q ++SQ +NKA+A ++LRA+L +L L ++ Sbjct: 228 FRSSGPGGQSVNTTDSAVRITHIPTGIVVSQQDQKSQLQNKAKAMDVLRARLLDLRLSEQ 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E A K+++ G +IR+Y P V D R + V++G++ F+ A Sbjct: 288 E--AERSRMRKSQVSTGDRSAKIRTYNF-PQGRVTDHRVGLTLYDIDSVMNGEISSFLDA 344 >gi|326335566|ref|ZP_08201753.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692332|gb|EGD34284.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 366 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 151/260 (58%), Gaps = 6/260 (2%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 L+E + L +++ E+ +F + DS +A +E+ AG GG E+ +A L RMY+++ Sbjct: 90 LEEAKERLPQLEEEI---KFLLIPKDPEDSKNAVMEIRAGTGGDEASIFAGDLYRMYSKY 146 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 + + + +++++G G K L I G + YG LK E GVHR+ R+ ++ R HT Sbjct: 147 CQDKGWSVSVMDMNEGTSGGFKEIILEINGEDVYGTLKFEAGVHRVQRVPQTETQGRVHT 206 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S +++ V P ++ ++E++ D +I ++G GGQ VNTT SA+++ HIPTG+ V+CQ Sbjct: 207 SAATVIVLPEAEE-FDVELNMEDVKIIRTTSTGPGGQSVNTTYSAIQLQHIPTGIEVRCQ 265 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMV 323 E+SQHKN +A +LR++LYE+EL K+ E + S G +IR+Y P V Sbjct: 266 DEKSQHKNLDKALKVLRSRLYEMELAKKMEADSARRKSMVSSGDRSAKIRTYNY-PQGRV 324 Query: 324 KDLRTNIEKTSPSDVLDGDL 343 D R + ++++GD+ Sbjct: 325 TDHRIGLTLYDLGNIINGDI 344 >gi|195031191|ref|XP_001988305.1| GH11092 [Drosophila grimshawi] gi|193904305|gb|EDW03172.1| GH11092 [Drosophila grimshawi] Length = 395 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 96/247 (38%), Positives = 142/247 (57%), Gaps = 6/247 (2%) Query: 74 ELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTE 129 ELA E+D+ +++QE ++ + + E + LL+ D EV AGAGG E Sbjct: 84 ELAAEKDEDMRALMQEENNVYADLLRKQEEDMLQELLTLADNVDYPALIFEVKAGAGGQE 143 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L MYT + E ++ E + G++ A LL+ P AY WL+ E GVHR Sbjct: 144 AMLFAQELYDMYTSYFEHMGWEYEEFAYETTDIGGLRHANLLVSDPEAYNWLRYEAGVHR 203 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ + + R HTS +SI V P D + + +++ D +I+T RASGAGGQHVNTTDSA Sbjct: 204 VQRVPTTEKSGRMHTSTASITVIPRPAD-VHVHLTDRDLKIETKRASGAGGQHVNTTDSA 262 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG-ESSKTEIGW 308 VRI H+PTG+ V+CQ ERSQ KN+ A L+AKL + +L+ E +S + + Sbjct: 263 VRIVHLPTGLAVECQSERSQLKNRELALKRLQAKLMQQQLESAEASKQATRKSQQGNLNR 322 Query: 309 GRQIRSY 315 +IR+Y Sbjct: 323 NEKIRTY 329 >gi|309803264|ref|ZP_07697361.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d] gi|309805669|ref|ZP_07699710.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c] gi|309806347|ref|ZP_07700360.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b] gi|309809934|ref|ZP_07703782.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D] gi|312871919|ref|ZP_07732001.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1] gi|312873839|ref|ZP_07733882.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d] gi|329921112|ref|ZP_08277635.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G] gi|308164772|gb|EFO67022.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d] gi|308165029|gb|EFO67271.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c] gi|308167331|gb|EFO69497.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b] gi|308169722|gb|EFO71767.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D] gi|311090621|gb|EFQ49022.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d] gi|311092496|gb|EFQ50858.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1] gi|328935019|gb|EGG31508.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G] Length = 362 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 139/242 (57%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE + ++ ++ + E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + +++++ D R+D Sbjct: 169 SGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDLDLDPKDIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQN 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A+ K +G G +IR+Y P V D R + +++G+L+D + A Sbjct: 288 Q--ASYDAKRKESVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISA 344 Query: 350 TL 351 + Sbjct: 345 LV 346 >gi|259501685|ref|ZP_05744587.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335] gi|302191107|ref|ZP_07267361.1| peptide chain release factor 1 [Lactobacillus iners AB-1] gi|309808088|ref|ZP_07702006.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a] gi|312874655|ref|ZP_07734679.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b] gi|315653748|ref|ZP_07906668.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195] gi|325913047|ref|ZP_08175420.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B] gi|259166970|gb|EEW51465.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335] gi|308168690|gb|EFO70790.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a] gi|311089885|gb|EFQ48305.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b] gi|315489110|gb|EFU78752.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195] gi|325477727|gb|EGC80866.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B] Length = 362 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 139/242 (57%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE + ++ ++ + E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + +++++ D R+D Sbjct: 169 SGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDLDLDPKDIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQN 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A+ K +G G +IR+Y P V D R + +++G+L+D + A Sbjct: 288 Q--ASYDAKRKESVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISA 344 Query: 350 TL 351 + Sbjct: 345 LV 346 >gi|91081965|ref|XP_967739.1| PREDICTED: similar to AGAP012082-PA, partial [Tribolium castaneum] Length = 383 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 116/327 (35%), Positives = 178/327 (54%), Gaps = 21/327 (6%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIE-----AKMLMRERQHLDNAISFIKEIQDRLCD 68 +D D A++ +S N H ++ +++ A + Q L NA++ K+ + + + Sbjct: 27 YDLDLAIKGVSLRNYIKRLEHEYEGLLKLNNYTANSRFHQLQPLINALNERKDAVENIQN 86 Query: 69 NLILLELALEEDD--CSILQETSDNLQ-RIKLEVEYKQFESLLSG--EADSNDAYLEVHA 123 L EL E+DD + +E + RIK ++ K E++L E + N LEV+A Sbjct: 87 ---LSELLNEKDDDIRKLAEEEKLTFESRIK-SIDEKLLEAILPSDKEDECNSIVLEVNA 142 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +AN L MY +AE + ++T+ + + GI+ A+ LI GP + + K Sbjct: 143 GVGGQEAMLFANELFEMYCNFAEHQGWETQIADYSPVDIGGIRHASALINGPQVFQFFKH 202 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ RI + R HTS S+ P + IE+ I D +I+T RASGAGGQHV Sbjct: 203 EAGVHRVQRIPTTEKAGRIHTSTVSVVALPQPTE-IEVNIDNKDLKIETKRASGAGGQHV 261 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT+SAVR+TH+PTG V+CQ +RSQ KN+ A LRA +Y+ +L+ E+IA K Sbjct: 262 NTTESAVRVTHLPTGFSVECQVDRSQVKNRQIALAKLRALIYQRDLE--EQIARNENMRK 319 Query: 304 TEIG---WGRQIRSYVLQPYQMVKDLR 327 ++ +IR+Y P + D R Sbjct: 320 NQVRSNFRNEKIRTYNF-PQDRITDHR 345 >gi|67923568|ref|ZP_00517041.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501] gi|67854594|gb|EAM49880.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501] Length = 370 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 89/244 (36%), Positives = 146/244 (59%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMY+R+AE +++ + + + G K A L I Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQRWNVKLVSESLADMGGFKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E GVHR+ R+ ++ R HTS +++ + P VDD +EIEI D + T Sbjct: 172 TGEQVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEIEIDPKDIEMTT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++L+++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQ 290 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMK 348 +E + ++++G G RS ++ Y KD R + S + L+GD+D+ ++ Sbjct: 291 QEA--VSSMRRSQVGTGS--RSEKIRTYNY-KDNRVTDHRLSQNFALVGALEGDIDNIIE 345 Query: 349 ATLA 352 + ++ Sbjct: 346 SCIS 349 >gi|302829783|ref|XP_002946458.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f. nagariensis] gi|300268204|gb|EFJ52385.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f. nagariensis] Length = 400 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 112/336 (33%), Positives = 171/336 (50%), Gaps = 61/336 (18%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L+R R+ L++ + +K+ R+ A+ E++ LQ+ + L R + Sbjct: 45 LLRVRRELEDLAALLKDPDSRV--------RAMAEEEGRELQQQAAGLTR-------RLL 89 Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE------- 156 +L+ + D A LE+ AGAGG E+ + LL MY ++A R + + +E Sbjct: 90 LALVPRDPRDGRAALLEMRAGAGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTASEVP 149 Query: 157 ---------IHDGEEAGIKSATLLIK----------------GPNAYGWLKGEQGVHRLV 191 + DG AG ++ + YG L E GVHR+ Sbjct: 150 GGVKHVVAAVADGRGAGRRAGEIGDGGEGYDGGEGNGDQDGDAIGVYGTLLPESGVHRVQ 209 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ V P D+ +++++ + D RI+T RASGAGGQHVN TDSAVR Sbjct: 210 RVPVTEAQGRVHTSTVAVVVLPQADE-VDVKLRDEDLRIETMRASGAGGQHVNVTDSAVR 268 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR------EEIANIGESSKTE 305 ITH+PTG+VV CQ ERSQH N+A A +LRA+LY+LE+QKR + A + + ++E Sbjct: 269 ITHVPTGLVVSCQNERSQHLNRAAALKILRARLYDLEMQKRAKEMDEQRSALVASADRSE 328 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P V D RT++ VL G Sbjct: 329 -----RIRTYNF-PQGRVTDHRTHLTLHDLDSVLVG 358 >gi|294660260|ref|NP_852919.2| peptide chain release factor 1 [Mycoplasma gallisepticum str. R(low)] gi|46576715|sp|Q7NBX3|RF1_MYCGA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|284811917|gb|AAP56487.2| Peptide chain release factor 1 [Mycoplasma gallisepticum str. R(low)] gi|284930381|gb|ADC30320.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str. R(high)] Length = 360 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 97/245 (39%), Positives = 139/245 (56%), Gaps = 13/245 (5%) Query: 112 ADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 AD ND +E+ AGG ES + + +Y + K +K +E+ G Sbjct: 106 ADPNDDKEVIVEMRPAAGGDESSIFVGNMFDLYKEYCSKHNWKINVIEMLPTS-VGYSFI 164 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G + Y +K E GVHR+ R+ ++ R HTS +I V P DD +EIEI+ +D Sbjct: 165 SFEINGEDVYSKMKFESGVHRVQRVPATEAKGRVHTSTITIAVLPQQDD-VEIEINPADL 223 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-L 287 RIDTYRASGAGGQHVN T+SAVRITHIPTG+V CQ+ +SQ N+ A MLR+KL+E Sbjct: 224 RIDTYRASGAGGQHVNRTESAVRITHIPTGIVAACQEGKSQIANRETAMKMLRSKLWEAA 283 Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 E +K + ++ + K ++G G +IR+Y P V D R N+ S + G++D Sbjct: 284 EKEKNDALSAL---RKNQVGSGDRAEKIRTYNY-PQNRVTDHRINMSLNSLDRFMMGEID 339 Query: 345 DFMKA 349 + + A Sbjct: 340 EMIDA 344 >gi|284931146|gb|ADC31084.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str. F] Length = 360 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 97/245 (39%), Positives = 139/245 (56%), Gaps = 13/245 (5%) Query: 112 ADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 AD ND +E+ AGG ES + + +Y + K +K +E+ G Sbjct: 106 ADPNDDKEVIVEMRPAAGGDESSIFVGNMFDLYKEYCSKHNWKINVIEMLPTS-VGYSFI 164 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G + Y +K E GVHR+ R+ ++ R HTS +I V P DD +EIEI+ +D Sbjct: 165 SFEINGEDVYSKMKFESGVHRVQRVPATEAKGRVHTSTITIAVLPQQDD-VEIEINPADL 223 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-L 287 RIDTYRASGAGGQHVN T+SAVRITHIPTG+V CQ+ +SQ N+ A MLR+KL+E Sbjct: 224 RIDTYRASGAGGQHVNRTESAVRITHIPTGIVAACQEGKSQIANRETAMKMLRSKLWEAA 283 Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 E +K + ++ + K ++G G +IR+Y P V D R N+ S + G++D Sbjct: 284 EKEKNDALSAL---RKNQVGSGDRAEKIRTYNY-PQNRVTDHRINMSLNSLDRFMMGEID 339 Query: 345 DFMKA 349 + + A Sbjct: 340 EMIDA 344 >gi|153210408|ref|ZP_01947622.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177'] gi|120575132|gb|EAX31756.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177'] Length = 267 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 74/159 (46%), Positives = 102/159 (64%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LE+ AG GG E+ +A L RMY R+AE + ++ + H+GE G K + Sbjct: 109 DERNVFLEIRAGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS ++ + P VD+ +I+I+ ++ RIDT Sbjct: 169 IGEGVYSQLKFESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 +RASGAGGQHVN TDSA+RITH+PTGVVV+CQ ER K Sbjct: 229 FRASGAGGQHVNRTDSAIRITHLPTGVVVECQDERRNTK 267 >gi|270007320|gb|EFA03768.1| hypothetical protein TcasGA2_TC013879 [Tribolium castaneum] Length = 387 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 116/327 (35%), Positives = 178/327 (54%), Gaps = 21/327 (6%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIE-----AKMLMRERQHLDNAISFIKEIQDRLCD 68 +D D A++ +S N H ++ +++ A + Q L NA++ K+ + + + Sbjct: 27 YDLDLAIKGVSLRNYIKRLEHEYEGLLKLNNYTANSRFHQLQPLINALNERKDAVENIQN 86 Query: 69 NLILLELALEEDD--CSILQETSDNLQ-RIKLEVEYKQFESLLSG--EADSNDAYLEVHA 123 L EL E+DD + +E + RIK ++ K E++L E + N LEV+A Sbjct: 87 ---LSELLNEKDDDIRKLAEEEKLTFESRIK-SIDEKLLEAILPSDKEDECNSIVLEVNA 142 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +AN L MY +AE + ++T+ + + GI+ A+ LI GP + + K Sbjct: 143 GVGGQEAMLFANELFEMYCNFAEHQGWETQIADYSPVDIGGIRHASALINGPQVFQFFKH 202 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ RI + R HTS S+ P + IE+ I D +I+T RASGAGGQHV Sbjct: 203 EAGVHRVQRIPTTEKAGRIHTSTVSVVALPQPTE-IEVNIDNKDLKIETKRASGAGGQHV 261 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT+SAVR+TH+PTG V+CQ +RSQ KN+ A LRA +Y+ +L+ E+IA K Sbjct: 262 NTTESAVRVTHLPTGFSVECQVDRSQVKNRQIALAKLRALIYQRDLE--EQIARNENMRK 319 Query: 304 TEIG---WGRQIRSYVLQPYQMVKDLR 327 ++ +IR+Y P + D R Sbjct: 320 NQVRSNFRNEKIRTYNF-PQDRITDHR 345 >gi|326771965|ref|ZP_08231250.1| peptide chain release factor 1 [Actinomyces viscosus C505] gi|326638098|gb|EGE38999.1| peptide chain release factor 1 [Actinomyces viscosus C505] Length = 364 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 102/249 (40%), Positives = 140/249 (56%), Gaps = 9/249 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS D +EV AG GG ES +A+ L RMY+R+AE++ + E L+ D + G K L I Sbjct: 102 DSRDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAI 161 Query: 173 K--GP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K GP + LK E GVHR+ R+ +S R HTS + + V P DD E++I Sbjct: 162 KARGPVEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDA 221 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +NK A +LRA+L Sbjct: 222 ADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLL 281 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 A S+ + +IR+Y P + D RT + + VLDGDL Sbjct: 282 AERAAAAAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLG 340 Query: 345 DFMKATLAI 353 + + +A+ Sbjct: 341 PVIASAIAM 349 >gi|298346212|ref|YP_003718899.1| peptide subunit release factor RF1 [Mobiluncus curtisii ATCC 43063] gi|304390026|ref|ZP_07371980.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298236273|gb|ADI67405.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 43063] gi|304326508|gb|EFL93752.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 367 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 98/247 (39%), Positives = 145/247 (58%), Gaps = 9/247 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG ES +A L+RMY +AEK + + L + + + G+K A++ Sbjct: 106 DARDVIMEIKAGEGGEESALFAGDLMRMYQHYAEKMGWAVQVLGLTESDLGGVKDASIAF 165 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K P W LK E GVHR+ R+ +S R HTS + + V P +++ +IEI Sbjct: 166 KAKGNPSPEEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDP 225 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +NK +LR++L Sbjct: 226 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLM 285 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +LE +KRE A +S+ + +IR+Y P + D RT + + VL+GDL Sbjct: 286 QLEAEKREAEAAEARASQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLA 344 Query: 345 DFMKATL 351 +++ + Sbjct: 345 PVIQSAI 351 >gi|303287338|ref|XP_003062958.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455594|gb|EEH52897.1| predicted protein [Micromonas pusilla CCMP1545] Length = 294 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 110/267 (41%), Positives = 153/267 (57%), Gaps = 12/267 (4%) Query: 82 CSILQETSDNLQRIKLEVEYKQFESLL-SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 S+ E D L +E K LL S +AD A LE+ AGAGG E+ +A L RM Sbjct: 10 ASMASEEHDALASTVPALEEKLAHLLLPSDDADDGGAILEIRAGAGGDEAARFAANLARM 69 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN- 199 Y +A +R + E + +E G K T + G + YG LK E GVHR VR S Sbjct: 70 YDMFARRRGWTFERMTATTTDEGGYKDVTFNVSGDDVYGTLKYESGVHRRVRRVQRVSGD 129 Query: 200 -SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + HTS +S+ V P ++ +E+++ + D RIDT RASGAGGQHVNTT+SAVR+TH+P+G Sbjct: 130 EGKVHTSTASVAVMPHAEE-VELDLRDEDVRIDTMRASGAGGQHVNTTNSAVRLTHVPSG 188 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWG---RQIRS 314 VV ERSQHKNK +A+ +LRA++YE L + E A+ K+ IG G ++R+ Sbjct: 189 TVVVMMDERSQHKNKEKAFKILRARIYEGLRAEAHRERAD---QRKSLIGSGDRSERVRT 245 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y + + VKD R N + +L+G Sbjct: 246 YNYKDGR-VKDHRVNAQVNDLEGLLNG 271 >gi|262341278|ref|YP_003284133.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272615|gb|ACY40523.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 361 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 165/295 (55%), Gaps = 23/295 (7%) Query: 74 ELALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSND---------------- 116 +LAL ++ IL+ SD +L+ + +YK E+L S E +S D Sbjct: 59 KLALLQEADFILKNDSDADLKELASIEKYKILENLSSIEKESYDLIFSLSNETEETTENH 118 Query: 117 --AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 A +E+ +G GG E+ + +LRMYT + +K +K + + G G K L + G Sbjct: 119 RNAIVELRSGTGGDEACLFVEDILRMYTMYFKKSGWKYKIIHAQKGGIKGYKEIILDVNG 178 Query: 175 P-NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 YG LK E GVHR+ RI +S R HTS ++ V P V D IE+ I+ SD + +T+ Sbjct: 179 KEGVYGNLKFESGVHRVQRIPKTESQGRVHTSAITVAVLPQVKD-IEVNINLSDIKKETF 237 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQHVN T+SAVR+TH+P+ + V+CQ+ERSQHKN +A N+LR+++Y+ E +KR Sbjct: 238 RSSGAGGQHVNKTESAVRLTHLPSKITVECQEERSQHKNFEKAINVLRSRIYQNEKEKRL 297 Query: 294 EIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + +I S G +IR+Y P V D R + + ++G++ + + Sbjct: 298 KEISIKRKSLVSTGDRSVKIRTYNY-PKSRVTDHRIHKSIYDLAGFMNGNIQEMI 351 >gi|72024372|ref|XP_797931.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115937037|ref|XP_001184225.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 422 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 96/243 (39%), Positives = 137/243 (56%), Gaps = 4/243 (1%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S E D ND +E AG GG E+ +A + MY R+A R + LE + G++ Sbjct: 153 LPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRYAAYRGWTFSVLEYFTTDMGGLR 212 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A++ + G AY L+ E GVHR+ R+ +S R HTS +I V P + I++++ Sbjct: 213 HASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLPQPKE-IDLKLDPK 271 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R++T +ASGAGGQHVNTTDSAVRITH+PTG+ + QQERSQHKN++ A ML+ ++Y Sbjct: 272 DLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRSIAMTMLQTRIYN 331 Query: 287 LELQKREEIANIGESSKTEIGWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 L + SS+ G GR +IR+Y Q ++ R P +L +L Sbjct: 332 RILADQTSSERSMRSSQVGTG-GRSEKIRTYNYQQDRITDHRRGRTVHGVPEYLLGSELL 390 Query: 345 DFM 347 D M Sbjct: 391 DEM 393 >gi|325911742|ref|ZP_08174149.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D] gi|325476508|gb|EGC79667.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D] Length = 362 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 139/242 (57%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE + ++ ++ + E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + +++++ D R+D Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDLDLDPKDIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQN 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A+ K +G G +IR+Y P V D R + +++G+L+D + A Sbjct: 288 Q--ASYDAKRKESVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISA 344 Query: 350 TL 351 + Sbjct: 345 LV 346 >gi|312871649|ref|ZP_07731741.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a] gi|311092874|gb|EFQ51226.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a] Length = 362 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 139/242 (57%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE + ++ ++ + E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + +++++ D R+D Sbjct: 169 TGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYE-QVDLDLDPKDIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQN 287 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + A+ K +G G +IR+Y P V D R + +++G+L+D + A Sbjct: 288 Q--ASYDAKRKESVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISA 344 Query: 350 TL 351 + Sbjct: 345 LV 346 >gi|315657282|ref|ZP_07910164.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491754|gb|EFU81363.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 367 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 98/247 (39%), Positives = 145/247 (58%), Gaps = 9/247 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG ES +A L+RMY +AEK + + L + + + G+K A++ Sbjct: 106 DARDVIMEIKAGEGGEESALFAGDLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAF 165 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K P W LK E GVHR+ R+ +S R HTS + + V P +++ +IEI Sbjct: 166 KAKGNPSPEEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDP 225 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +NK +LR++L Sbjct: 226 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLM 285 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +LE +KRE A +S+ + +IR+Y P + D RT + + VL+GDL Sbjct: 286 QLEAEKREAEAAEARASQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLA 344 Query: 345 DFMKATL 351 +++ + Sbjct: 345 PVIQSAI 351 >gi|315654795|ref|ZP_07907700.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333] gi|315490756|gb|EFU80376.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333] Length = 367 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 98/247 (39%), Positives = 145/247 (58%), Gaps = 9/247 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG ES +A L+RMY +AEK + + L + + + G+K A++ Sbjct: 106 DARDVIMEIKAGEGGEESALFAGDLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAF 165 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K P W LK E GVHR+ R+ +S R HTS + + V P +++ +IEI Sbjct: 166 KAKGNPSPEEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDP 225 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +NK +LR++L Sbjct: 226 NDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLM 285 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +LE +KRE A +S+ + +IR+Y P + D RT + + VL+GDL Sbjct: 286 QLEAEKREAEAAEARASQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLA 344 Query: 345 DFMKATL 351 +++ + Sbjct: 345 PVIQSAI 351 >gi|257056964|ref|YP_003134796.1| peptide chain release factor 1 [Saccharomonospora viridis DSM 43017] gi|256586836|gb|ACU97969.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharomonospora viridis DSM 43017] Length = 358 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 120/337 (35%), Positives = 181/337 (53%), Gaps = 12/337 (3%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP + + A+ L R L + + E++ + ELA E D S Sbjct: 16 LEKQLADPAVHADQARARKLGRRYSELSPVVKTVGELETTRSELEAAKELAAE--DSSFA 73 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 +E D L + +E K E LL + D +D +E+ +G GG ES +A LLRMY R+ Sbjct: 74 EEV-DRLGKRVSALETKLAELLLPRDPYDGSDVVMEIKSGEGGEESALFAGDLLRMYLRF 132 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIK--GPNAYG-W--LKGEQGVHRLVRISPYDSN 199 AE++ + E L+ + G K T+ +K G A G W LK E GVHR+ R+ +S Sbjct: 133 AERQGWTAEILDATPSDLGGYKDVTVSVKSKGTEAEGVWACLKFEGGVHRVQRVPATESQ 192 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS + + +Y + IE+EI +D RID +R+SG GGQ VNTTDSAVR+TH+PTG+ Sbjct: 193 GRIHTSAAGVLIY-PEPEEIEVEIDPNDLRIDVFRSSGPGGQSVNTTDSAVRVTHLPTGI 251 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQ 318 VV CQ E+SQ +N+A+A +L+A+L L ++ A S+ + ++R+Y Sbjct: 252 VVSCQNEKSQIQNRARAIQVLQARLQALAEEEAAAKAADARRSQVRTVDRSERVRTYNF- 310 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P + D R N + + VLDG+L ++A A + Sbjct: 311 PENRISDHRVNYKAYNLDQVLDGELSGVLEALRAADR 347 >gi|300361412|ref|ZP_07057589.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03] gi|300354031|gb|EFJ69902.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03] Length = 362 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/243 (36%), Positives = 139/243 (57%), Gaps = 9/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE + +K ++ E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS +++ V P + ++I++ D R+D Sbjct: 169 TGDKVYSKLKYENGAHRVQRVPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ E Q Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQN 287 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R++ K +G G +IR+Y P V D R + V++G+LD+ + Sbjct: 288 RDK---YDAKRKDAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIIN 343 Query: 349 ATL 351 A + Sbjct: 344 ALV 346 >gi|42518855|ref|NP_964785.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533] gi|227889713|ref|ZP_04007518.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200] gi|268319749|ref|YP_003293405.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii FI9785] gi|61214647|sp|Q74K25|RF1_LACJO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|41583141|gb|AAS08751.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533] gi|227849577|gb|EEJ59663.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200] gi|262398124|emb|CAX67138.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii FI9785] gi|329667598|gb|AEB93546.1| peptide chain release factor 1 [Lactobacillus johnsonii DPC 6026] Length = 362 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 9/241 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE + +K ++ E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ R+ +S R HTS +++ V P + ++I++ D R+D Sbjct: 169 TGDKVYSKLKYENGAHRVQRVPVTESQGRVHTSTATVAVMPEYE-QVDIDLDPKDIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ E Q Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQN 287 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R++ K +G G +IR+Y P V D R + +++G+LD+ + Sbjct: 288 RDQ---YDAKRKESVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIN 343 Query: 349 A 349 A Sbjct: 344 A 344 >gi|227875209|ref|ZP_03993351.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243] gi|269978100|ref|ZP_06185050.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1] gi|307700819|ref|ZP_07637844.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16] gi|227844114|gb|EEJ54281.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243] gi|269933609|gb|EEZ90193.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1] gi|307613814|gb|EFN93058.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16] Length = 366 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 161/290 (55%), Gaps = 19/290 (6%) Query: 74 ELALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+A E+ D + LQE D +Q +E+ + D+ D +E+ AG GG E Sbjct: 69 EMAAEDPDFAAELPKLQEAFDTVQAALIEILTPRDPD------DARDVIMEIKAGEGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LK 182 S +A L+RMY +AEK + + L + + + G+K A + K P W LK Sbjct: 123 SALFAGDLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAFKAKGNPTPEEGVWAHLK 182 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S R HTS + + V P +++ +IEI +D RID YR+SG GGQ Sbjct: 183 YEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQS 242 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV Q E+SQ +NK +LR++L +LE +KRE A +S Sbjct: 243 VNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEQEKREAEAAEARAS 302 Query: 303 KTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + +IR+Y P + D RT + + VL+G+L +++ + Sbjct: 303 QVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGELAPVIQSAI 351 >gi|104773785|ref|YP_618765.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|119361552|sp|Q1GAX5|RF1_LACDA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|103422866|emb|CAI97528.1| Peptide chain release factor 1 (RF-1) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 361 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 88/241 (36%), Positives = 139/241 (57%), Gaps = 9/241 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE + + ++ E G K A ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRAAIMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + ++I++ + R+D Sbjct: 169 TGNKVYSKLKYENGAHRVQRIPVTESAGRVHTSTATVAVMPEYE-QVDIDLDPKEIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+A+A +L++++Y+ E Q Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQN 287 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R++ K +G G +IR+Y P V D R + +++G+LD+ + Sbjct: 288 RDK---YDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVID 343 Query: 349 A 349 A Sbjct: 344 A 344 >gi|145596156|ref|YP_001160453.1| peptide chain release factor 1 [Salinispora tropica CNB-440] gi|145305493|gb|ABP56075.1| bacterial peptide chain release factor 1 (bRF-1) [Salinispora tropica CNB-440] Length = 362 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 92/240 (38%), Positives = 139/240 (57%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG ES +A LLRMYTR+AE+ + E ++ D + G+K +L I Sbjct: 101 DAKDVIVEIKAGEGGEESALFAGDLLRMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAI 160 Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K G + LK E GVHR+ R+ +S R HTS + + + P ++ I++ I Sbjct: 161 KSKGVPEGGNGVWSRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLMLPEAEE-IDVTIDP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 ++ RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ QA +LRA+L Sbjct: 220 NELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRARLL 279 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + ++ + A+ ++ + +IR+Y P + D R + L G+LD Sbjct: 280 AVAQEQADAAASDARKAQVRTVDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELD 338 >gi|126697059|ref|YP_001091945.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9301] gi|166223586|sp|A3PF19|RF1_PROM0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|126544102|gb|ABO18344.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9301] Length = 364 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 116/348 (33%), Positives = 184/348 (52%), Gaps = 25/348 (7%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-------SFIKEIQDRLCDNLI 71 A + L + DP + + + + + RER L+ + KEI+D NL Sbjct: 13 ASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVLDFNKLLDTDKEIED--SKNL- 69 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 L E +++ S++ E L+ K E+ K +LL + D LE+ AGAGG E+ Sbjct: 70 LKENRNDKEMESLINEELITLEESKSELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + + + + G K + +KG + Y LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I +D + T R+ GAGGQ+VN ++A+ Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEAD-PVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK--TEIGW 308 + H PTG+ V C QERSQ +N+ +A +LRAKLYE++L++ AN E S+ +++G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKE----ANAKERSQRLSQVGT 304 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 G RS ++ Y KD RT + S +L G LD+ + A +A Sbjct: 305 GD--RSEKIRTYNF-KDNRTTDHRLGSNFSLEPILAGQLDEVINACIA 349 >gi|75906944|ref|YP_321240.1| peptide chain release factor 1 [Anabaena variabilis ATCC 29413] gi|119361508|sp|Q3MF91|RF1_ANAVT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|75700669|gb|ABA20345.1| bacterial peptide chain release factor 1 (bRF-1) [Anabaena variabilis ATCC 29413] Length = 366 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 147/244 (60%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA LLRMY+R+A+ + ++ + + GE G K L I Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + Y LK E GVHR+ R+ ++ R HTS +++ + P VD+ +EI I D + T Sbjct: 172 QGDSVYSKLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDE-VEIHIDPKDIEMTT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L+++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQ 290 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348 +E + ++++G G RS ++ Y KD R + S + VL+GDL+ ++ Sbjct: 291 QE--EVTSMRRSQVGTGS--RSEKIRTYNY-KDSRATDHRLGQNFSLNPVLEGDLETVIQ 345 Query: 349 ATLA 352 + ++ Sbjct: 346 SCIS 349 >gi|262201848|ref|YP_003273056.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247] gi|262085195|gb|ACY21163.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247] Length = 364 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 99/249 (39%), Positives = 146/249 (58%), Gaps = 7/249 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D LE+ +GAGG ES +A L RMY ++ E+ +K + L + + + G K ATL I Sbjct: 110 DGDDVVLEIKSGAGGEESALFAADLARMYLKYCERHGWKAQVLGVTESDLGGYKEATLSI 169 Query: 173 KGPNA-----YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K A + LK E GVHR+ R+ +S R HTS + + +YP ++ ++ I ESD Sbjct: 170 KAKEAVREGVWSRLKFEGGVHRVQRVPVTESQGRIHTSAAGVLIYPEPEELEQVAIDESD 229 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA+A +L A+L Sbjct: 230 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAA 289 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ + A G +++ + +IR+Y P + D R + + VL G++D Sbjct: 290 AEEEAQAAAAQGRAAQIRTVDRSERIRTYNF-PENRIADHRIGYKANNLDAVLGGEMDGL 348 Query: 347 MKATLAIKK 355 + A +A + Sbjct: 349 LDALVAADR 357 >gi|312139166|ref|YP_004006502.1| peptide chain release factor 1 prfa [Rhodococcus equi 103S] gi|325673529|ref|ZP_08153220.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707] gi|311888505|emb|CBH47817.1| peptide chain release factor 1 PrfA [Rhodococcus equi 103S] gi|325555550|gb|EGD25221.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707] Length = 359 Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 99/243 (40%), Positives = 143/243 (58%), Gaps = 7/243 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D LE+ +G GG ES +A+ L RMY R+AE+ ++ E L+ + G K AT+ I Sbjct: 105 DGDDVVLELKSGEGGEESALFASDLARMYVRYAERAGWRVEILDATVSDLGGYKDATISI 164 Query: 173 KGPN-----AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 K + LK E GVHR+ R+ +S R HTS + + +YP ++ E++I E+D Sbjct: 165 KSKGDVRDGVWSRLKFEGGVHRVQRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETD 224 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RID YR+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA+A +L A+L Sbjct: 225 LRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAA 284 Query: 288 ELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + + A+ G S+ + +IR+Y P + D R + + VLDGD++ Sbjct: 285 AEEAADAEASAGRQSQVRTVDRSERIRTYNF-PENRITDHRIGFKAHNLDAVLDGDMEAL 343 Query: 347 MKA 349 + A Sbjct: 344 LDA 346 >gi|209527112|ref|ZP_03275626.1| peptide chain release factor 1 [Arthrospira maxima CS-328] gi|209492452|gb|EDZ92793.1| peptide chain release factor 1 [Arthrospira maxima CS-328] Length = 371 Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 92/242 (38%), Positives = 142/242 (58%), Gaps = 8/242 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMY+R+AE + ++ L + G K A L I Sbjct: 115 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEI 174 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ ++ R HTS +++ + P VDD +E++I D + T Sbjct: 175 QGARVYSQLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEVQIDPKDIEMTT 233 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C +ERSQ KN+ +A +LRAKLYE +L R Sbjct: 234 ARSGGAGGQNVNKVETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKL--R 291 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + ++++G G +IR+Y + + V D R S + VL+G + D ++A Sbjct: 292 EQQDAVTSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-HNFSLAPVLEGGIGDLIQA 349 Query: 350 TL 351 + Sbjct: 350 CI 351 >gi|149192359|ref|ZP_01870562.1| peptide chain release factor 1 [Vibrio shilonii AK1] gi|148833798|gb|EDL50832.1| peptide chain release factor 1 [Vibrio shilonii AK1] Length = 229 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 89/217 (41%), Positives = 134/217 (61%), Gaps = 6/217 (2%) Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+++AEK+ ++ E + ++ E+ G K + G AYG LK E G HR+ R+ + Sbjct: 1 FRMYSKYAEKKGWRIEVMSSNESEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATE 60 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PT Sbjct: 61 SQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPT 120 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G VV+CQ ERSQHKNKA+A ++L A+ + ++ + A + ++ + +G G +IR+ Sbjct: 121 GTVVECQDERSQHKNKAKAMSVLAAR--IIAAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 178 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y P V D R N+ S+V++GDL + L Sbjct: 179 YNY-PQGRVSDHRINLTLYRLSEVMEGDLQSLVDPVL 214 >gi|17231677|ref|NP_488225.1| peptide chain release factor 1 [Nostoc sp. PCC 7120] gi|20139331|sp|Q8YPK9|RF1_ANASP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|17133320|dbj|BAB75884.1| translation releasing factor RF-1 [Nostoc sp. PCC 7120] Length = 366 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 147/244 (60%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA LLRMY+R+A+ + ++ + + GE G K L I Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + Y LK E GVHR+ R+ ++ R HTS +++ + P VD+ +EI I D + T Sbjct: 172 QGESVYSKLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDE-VEIHIDPKDIEMTT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L+++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQ 290 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348 +E + ++++G G RS ++ Y KD R + S + VL+GDL+ ++ Sbjct: 291 QE--EVTSMRRSQVGTGS--RSEKIRTYNY-KDSRATDHRLGQNFSLNPVLEGDLETVIQ 345 Query: 349 ATLA 352 + ++ Sbjct: 346 SCIS 349 >gi|329945388|ref|ZP_08293151.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str. F0386] gi|328529010|gb|EGF55941.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str. F0386] Length = 364 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 9/249 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +EV AG GG ES +A+ L RMY+R+AE++ + E L+ D + G K L I Sbjct: 102 DARDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAI 161 Query: 173 K--GP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K GP + LK E GVHR+ R+ +S R HTS + + V P DD E++I Sbjct: 162 KTRGPVEPQNGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDA 221 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +NK A +LRA+L Sbjct: 222 ADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLL 281 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 A S+ + +IR+Y P + D RT + + VLDGDL Sbjct: 282 AERAAAVAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLG 340 Query: 345 DFMKATLAI 353 + + +A+ Sbjct: 341 PVIASAIAM 349 >gi|194246573|ref|YP_002004212.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma mali] gi|193806930|emb|CAP18362.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma mali] Length = 347 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 162/291 (55%), Gaps = 25/291 (8%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG--EADSNDAYL 119 IQ+ +N LL LA +E + IL E K+ E K+ + LL D+ + + Sbjct: 62 IQNDSNNNDDLLNLAFQEQE--ILNE--------KIHNELKKIKYLLFPLEPEDNKNVIM 111 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 ++ AGG E+ ++ L RMY ++AE + +K E L + + GI S ++ G Y Sbjct: 112 QIKGAAGGDEANLFSADLFRMYCKYAELKNWKLEILNLMTNIKGGISSVEFILSGKKVYY 171 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E GVHR+ R+ + R HTS S++ V P VD+ I+ +I D R DT+ +SG G Sbjct: 172 FLKYESGVHRVQRVPTTEVQGRIHTSTSTVLVMPEVDE-IDFKIDWKDIRFDTFNSSGPG 230 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE------LELQKRE 293 GQ VNTT SAVR+TH+P+ + V CQ +SQH+NK +A+++L+A++Y+ +E + ++ Sbjct: 231 GQSVNTTKSAVRLTHLPSNISVACQIGKSQHENKKKAFSLLKARIYDKIHKQNMEKENKK 290 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +G+ ++E +IR+Y P + D R ++ +++G LD Sbjct: 291 RKFLVGDGQRSE-----KIRTYNY-PQNRITDHRISLNLKKLDIIMEGKLD 335 >gi|332712139|ref|ZP_08432067.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L] gi|332348945|gb|EGJ28557.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L] Length = 370 Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 90/246 (36%), Positives = 149/246 (60%), Gaps = 14/246 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMY+R++E + ++ + L + G K A L I Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLVRMYSRYSESQNWRVKLLSESLADMGGFKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ ++ R HTS +++ V P VD+ +++EI + I T Sbjct: 172 QGEQVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDE-VDVEIDPKEIEIST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++LQ++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLYHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEIKLQEQ 290 Query: 293 EEI------ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E A +G +++E +IR+Y + + V D R + S + +L+GDL+ Sbjct: 291 QEAVTSMRRAQVGTGARSE-----KIRTYNYKDNR-VTDHRLG-QNYSLAPLLEGDLEGL 343 Query: 347 MKATLA 352 ++A ++ Sbjct: 344 IQACIS 349 >gi|307154812|ref|YP_003890196.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822] gi|306985040|gb|ADN16921.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822] Length = 370 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 87/243 (35%), Positives = 149/243 (61%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMY+R+AE +++ + + + G K A L I Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQRWAVKLVSESLADMGGFKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + Y LK E GVHR+ R+ ++ R HTS +++ + P VD+ +E++I D I T Sbjct: 172 QGDSVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDE-VEVQIDPKDLEIST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++L+++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQ 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E + ++++G G +IR+Y + + V D R + S L+GD+D+ +++ Sbjct: 291 QEA--VSSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-QNFSLVGALEGDIDEIIQS 346 Query: 350 TLA 352 ++ Sbjct: 347 CIS 349 >gi|159039554|ref|YP_001538807.1| peptide chain release factor 1 [Salinispora arenicola CNS-205] gi|157918389|gb|ABV99816.1| peptide chain release factor 1 [Salinispora arenicola CNS-205] Length = 362 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 139/240 (57%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG ES +A LLRMYTR+AE+ + E ++ D + G+K +L I Sbjct: 101 DAKDVIVEIKAGEGGEESALFAGDLLRMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAI 160 Query: 173 K-------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K G + LK E GVHR+ R+ +S R HTS + + + P ++ +++ I Sbjct: 161 KSKGVPEGGNGVWSRLKWEGGVHRVQRVPVTESQGRIHTSAAGVLMLPEAEE-VDVTIDP 219 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 ++ RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ QA +LRA+L Sbjct: 220 NELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQALRILRARLL 279 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + ++ + A+ ++ + +IR+Y P + D R + L G+LD Sbjct: 280 AVAQEQADAAASDARKAQVRTVDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELD 338 >gi|320533186|ref|ZP_08033906.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str. F0337] gi|320134600|gb|EFW26828.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str. F0337] Length = 340 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 9/249 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +EV AG GG ES +A+ L RMY+R+AE++ + E L+ D + G K L I Sbjct: 78 DARDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAI 137 Query: 173 K--GP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K GP + LK E GVHR+ R+ +S R HTS + + V P DD E++I Sbjct: 138 KTRGPTEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDA 197 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +NK A +LRA+L Sbjct: 198 ADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLL 257 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 A S+ + +IR+Y P + D RT + + VLDGDL Sbjct: 258 AERAAAAAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLG 316 Query: 345 DFMKATLAI 353 + + +A+ Sbjct: 317 PVIASAIAM 325 >gi|119511149|ref|ZP_01630266.1| peptide chain release factor 1 [Nodularia spumigena CCY9414] gi|119464137|gb|EAW45057.1| peptide chain release factor 1 [Nodularia spumigena CCY9414] Length = 365 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 90/243 (37%), Positives = 147/243 (60%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA LLRMY+R+AE + +K + + GE G K L I Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLLRMYSRYAELQHWKVKLVSESLGEMGGFKEVILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + Y LK E GVHR+ R+ ++ R HTS +++ + P VDD +EI I D + T Sbjct: 172 QGDSVYSQLKFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDD-VEIHIDPKDIEMST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++A + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L ++ Sbjct: 231 ARSGGAGGQNVNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLAEQ 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + ++++G G +IR+Y + + V D R + S + VL+G+L+ +++ Sbjct: 291 QDA--VTSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-QNYSLNPVLEGELETVIQS 346 Query: 350 TLA 352 ++ Sbjct: 347 CIS 349 >gi|284050702|ref|ZP_06380912.1| peptide chain release factor 1 [Arthrospira platensis str. Paraca] gi|291567816|dbj|BAI90088.1| peptide chain release factor 1 [Arthrospira platensis NIES-39] Length = 371 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 92/242 (38%), Positives = 142/242 (58%), Gaps = 8/242 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMY+R+AE + ++ L + G K A L I Sbjct: 115 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEI 174 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ ++ R HTS +++ + P VDD +E++I D + T Sbjct: 175 QGDRVYSQLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEVQIDAKDIEMTT 233 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C +ERSQ KN+ +A +LRAKLYE +L R Sbjct: 234 ARSGGAGGQNVNKVETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKL--R 291 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + ++++G G +IR+Y + + V D R S + VL+G + D ++A Sbjct: 292 EQQDAVTSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-HNFSLAPVLEGGIGDLIQA 349 Query: 350 TL 351 + Sbjct: 350 CV 351 >gi|62719461|gb|AAX93331.1| peptide chain release factor 2 [Lactobacillus sanfranciscensis] Length = 156 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 84/155 (54%), Positives = 108/155 (69%), Gaps = 1/155 (0%) Query: 178 YGWLKGEQG-VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 YG+LK +G LVR+SP+DS RRHTS +S+ V P +D++ +I+ D RID +R+S Sbjct: 1 YGYLKIRKGEFIGLVRLSPFDSAGRRHTSLASVNVMPELDENANGDINPDDLRIDVFRSS 60 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N T SAVRITH+PTG+V Q +RSQ +N+ A NML++KLYELE +K+ E Sbjct: 61 GAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNRVTAMNMLKSKLYELEEEKKAEEK 120 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 E + EIGWG QIRSYV PY MVKD T E Sbjct: 121 AKIEGKQLEIGWGSQIRSYVFHPYTMVKDHGTGHE 155 >gi|254431314|ref|ZP_05045017.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001] gi|197625767|gb|EDY38326.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001] Length = 365 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 115/360 (31%), Positives = 181/360 (50%), Gaps = 36/360 (10%) Query: 13 LFDWDNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68 L D A +R L + DP + N + + + RER L+ + +++Q L D Sbjct: 6 LHDRLEAARRTFETLERQLADPAVASNPDQLQAIARERARLEPLVLDQRQLQKLLAEEAD 65 Query: 69 NLILL-----ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVH 122 LL + A+EE L++ ++ + ++ + +LL + D LE+ Sbjct: 66 ARTLLRDHRGDRAMEELASEELKQLAERIHSLRTSLTI----ALLPRDPRDERSVMLEIR 121 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG E+ WA L RMY R+A+ ++ E + + E G K L I+G + LK Sbjct: 122 AGAGGDEAAIWAGDLARMYERYAQSVGWRVEPVSASEAELGGYKELILSIRGEGVFSQLK 181 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S R HTS +++ V P D +E++I D I T R+ GAGGQ+ Sbjct: 182 FEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DPVEVQIEPGDVEISTARSGGAGGQN 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL------QKREEIA 296 VN ++AV + H P+G+ V C QERSQ +N+ +A +LRAKLYE +L ++ +A Sbjct: 241 VNKVETAVDLLHKPSGIRVFCTQERSQMQNRERAMEILRAKLYERQLAEANARERSARLA 300 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 +G ++E +IR+Y KD R + S VL+G L D + A +A Sbjct: 301 QVGSGDRSE-----KIRTY------NYKDNRATDHRLGRNFSLEPVLNGQLQDVIGACIA 349 >gi|258512739|ref|YP_003186173.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479465|gb|ACV59784.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 356 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/242 (40%), Positives = 143/242 (59%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D ++E+ A AGG E+ +A LLRMY R+AEK +KTE ++ + G + + + Sbjct: 106 DDKDVFVEIRAAAGGEEAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS ++ + +E+EI E D RIDT Sbjct: 166 HGKGAYAKLKFESGTHRVQRVPVTESGGRIHTS-TATVAVLPEVEEVEVEIHEKDLRIDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + ++G GGQ VNTT SAVRITH+PTG+VV CQ E+SQ KNK +A +LRA+LY E +R Sbjct: 225 FCSTGPGGQSVNTTQSAVRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLY--EKAQR 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + + ++G G +IR+Y P V D R + VLDG+LD+ ++A Sbjct: 283 EQQEELAAKRRLQVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDAVLDGELDEIIQA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|72071048|ref|XP_793802.1| PREDICTED: similar to Mitochondrial translational release factor 1-like [Strongylocentrotus purpuratus] gi|115937039|ref|XP_001184371.1| PREDICTED: similar to Mitochondrial translational release factor 1-like [Strongylocentrotus purpuratus] Length = 298 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/243 (39%), Positives = 136/243 (55%), Gaps = 4/243 (1%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S E D ND +E AG GG E+ +A + MY R+A R + LE + G++ Sbjct: 29 LPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRFAAYRGWTFSVLEYFTTDMGGLR 88 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A++ + G AY L+ E GVHR+ R+ +S R HTS +I V P + I++++ Sbjct: 89 HASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLPQPKE-IDLKLDPK 147 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R++T +ASGAGGQHVNTTDSAVRITH+PTG+ + QQERSQHKN+ A ML+ ++Y Sbjct: 148 DLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRFIAMTMLQTRIYN 207 Query: 287 LELQKREEIANIGESSKTEIGWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 L + SS+ G GR +IR+Y Q ++ R P +L +L Sbjct: 208 RILADQTSSERSIRSSQVGTG-GRSEKIRTYNYQQDRITDHRRGRTVHGVPEYLLGSELL 266 Query: 345 DFM 347 D M Sbjct: 267 DEM 269 >gi|301029486|ref|ZP_07192568.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1] gi|299877629|gb|EFI85840.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1] Length = 219 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 85/207 (41%), Positives = 127/207 (61%), Gaps = 6/207 (2%) Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R+++ E + +GE G K I G YG LK E G HR+ R+ +S R HTS Sbjct: 1 RRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSAC 60 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER Sbjct: 61 TVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 120 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYVLQPYQMVK 324 SQHKNKA+A ++L A+++ E+ KR++ + + +G G + R+Y P V Sbjct: 121 SQHKNKAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVT 177 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ +V++G LD ++ + Sbjct: 178 DHRINLTLYRLDEVMEGKLDMLIEPII 204 >gi|306818471|ref|ZP_07452194.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239] gi|304648644|gb|EFM45946.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239] Length = 366 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/247 (39%), Positives = 144/247 (58%), Gaps = 9/247 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG ES +A L+RMY +AEK + + L + + + G+K A + Sbjct: 106 DARDVIMEIKAGEGGEESALFAGDLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAF 165 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K P W LK E GVHR+ R+ +S R HTS + + V P +++ +IEI Sbjct: 166 KAKGNPTPEEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDP 225 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITHIPTG+VV Q E+SQ +NK +LR++L Sbjct: 226 NDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVSMQNEKSQLQNKEAGMRVLRSRLM 285 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +LE +KRE A +S+ + +IR+Y P + D RT + + VL+G+L Sbjct: 286 QLEQEKREAEAAEARASQVRTVDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGELA 344 Query: 345 DFMKATL 351 +++ + Sbjct: 345 PVIQSAI 351 >gi|218289204|ref|ZP_03493439.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius LAA1] gi|218240552|gb|EED07732.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius LAA1] Length = 356 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/242 (40%), Positives = 143/242 (59%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D ++E+ A AGG E+ +A LLRMY R+AEK +KTE ++ + G + + + Sbjct: 106 DDKDVFVEIRAAAGGEEAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E G HR+ R+ +S R HTS ++ + +E+EI E D RIDT Sbjct: 166 HGKGAYAKLKFESGTHRVQRVPITESGGRIHTS-TATVAVLPEVEEVEVEIHEKDLRIDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + ++G GGQ VNTT SAVRITH+PTG+VV CQ E+SQ KNK +A +LRA+LY E +R Sbjct: 225 FCSTGPGGQSVNTTQSAVRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLY--EKAQR 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + + ++G G +IR+Y P V D R + VLDG+LD+ ++A Sbjct: 283 EQQEELAAKRRLQVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDAVLDGELDEIIQA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|16332286|ref|NP_443014.1| peptide chain release factor 1 [Synechocystis sp. PCC 6803] gi|2500139|sp|P74707|RF1_SYNY3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|1653916|dbj|BAA18826.1| peptide chain release factor [Synechocystis sp. PCC 6803] Length = 365 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 82/206 (39%), Positives = 127/206 (61%), Gaps = 6/206 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMYTR+AE + +K L + G K A L + Sbjct: 112 DEKNIMLEIRAGTGGDEASIWAGDLVRMYTRYAESQGWKVSLLSESLADMGGFKEAILEV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E GVHR+ R+ ++ R HTS +++ + P VDD +E++I D + T Sbjct: 172 KGDRVYSQLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEVKIDPKDIEMST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +N+ +A +LRAKLY++ LQ++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDMMLQEQ 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSY 315 + I + ++++G G +IR+Y Sbjct: 291 NDA--ISSNRRSQVGTGSRSEKIRTY 314 >gi|321479100|gb|EFX90056.1| hypothetical protein DAPPUDRAFT_299896 [Daphnia pulex] Length = 417 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 115/354 (32%), Positives = 189/354 (53%), Gaps = 25/354 (7%) Query: 5 RQLNCLGGLFDWDNAVQ---RLSFLNTKTE-DPHLWQNVIEAK--MLMRERQHLDNAISF 58 R LN L + ++N R+ LN K + D +QN IE+K + + +QH+ + Sbjct: 43 RSLNLLNQVSTFENIFDPRLRIFLLNIKKKFDESGFQN-IESKSGIGVVNKQHIQSLAGL 101 Query: 59 IKEIQDRLCDNLILLEL-ALEEDD------CSILQETSDNLQRIKLEVEYKQFESLLSGE 111 ++ D L EL AL DD ++ E L++I ++++ + E +L + Sbjct: 102 GGKLLQTEND---LQELKALSADDDKNGDLAKMVSEEFSQLKQILVQIQNEVLELILQED 158 Query: 112 ADSNDAY-LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 + +E AG GG ES + N +L+MY + E + E +I + GI+ A + Sbjct: 159 NHQTEGIIMEFSAGVGGQESMLFCNEILQMYITYCESEGWDYELTDIEKSDLEGIRHAAI 218 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I +AY L+ E GVHR+ R+ + R HTS ++ + P + + + I + D +I Sbjct: 219 CINNSDAYDRLQFESGVHRVQRVPKTEKAGRVHTSTVAVAILPRPSE-VTVNIEQKDLKI 277 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 +T RASGAGGQHVNTT+SAVRI HIP+GVV +CQ +RSQ +N+ A + +RA+L+++++ Sbjct: 278 ETKRASGAGGQHVNTTESAVRIVHIPSGVVAECQTQRSQMQNRKVAIDKIRARLFQMKID 337 Query: 291 KREEIANIGESSKTEIG-WGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +++A S K ++G GR +IR+Y P + D R N + + L G Sbjct: 338 --QQLATTRSSRKLQVGSSGRSEKIRTYNF-PQDRITDHRINFTSHNLGEFLRG 388 >gi|116513791|ref|YP_812697.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|313123397|ref|YP_004033656.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|122275439|sp|Q04BB3|RF1_LACDB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116093106|gb|ABJ58259.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|312279960|gb|ADQ60679.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325125449|gb|ADY84779.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus 2038] gi|325684404|gb|EGD26572.1| peptide chain release factor RF1 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 361 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 9/241 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE + + ++ E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + ++I++ + R+D Sbjct: 169 TGNKVYSKLKYENGAHRVQRIPVTESAGRVHTSTATVAVMPEYE-QVDIDLDPKEIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+A+A +L++++Y+ E Q Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQN 287 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R++ K +G G +IR+Y P V D R + +++G+LD+ + Sbjct: 288 RDK---YDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVID 343 Query: 349 A 349 A Sbjct: 344 A 344 >gi|300812481|ref|ZP_07092907.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496542|gb|EFK31638.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 361 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 9/241 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D +E+ AGG E+ +A LLRMY ++AE + + ++ E G K ++I Sbjct: 109 DDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMI 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E G HR+ RI +S R HTS +++ V P + ++I++ + R+D Sbjct: 169 TGNKVYSKLKYENGAHRVQRIPVTESAGRVHTSTATVAVMPEYE-QVDIDLDPKEIRVDV 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQK 291 YR+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ +N+A+A +L++++Y+ E Q Sbjct: 228 YRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQN 287 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R++ K +G G +IR+Y P V D R + +++G+LD+ + Sbjct: 288 RDK---YDAKRKNAVGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVID 343 Query: 349 A 349 A Sbjct: 344 A 344 >gi|195398186|ref|XP_002057705.1| GJ17953 [Drosophila virilis] gi|194141359|gb|EDW57778.1| GJ17953 [Drosophila virilis] Length = 393 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 2/209 (0%) Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 L+ D EV+AGAGG E+ +A L MYT + E ++ E + G++ Sbjct: 122 LADHEDYPSLIFEVNAGAGGQEAMLFAQELYDMYTSYFEHMGWEYEQYAHETTDIGGLRY 181 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 A LL+ P AY WL+ E GVHR+ R+ + + R HTS +SI V P D +++ I+E D Sbjct: 182 ANLLVNDPEAYNWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-VQVHIAERD 240 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A L+AKL + Sbjct: 241 LKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVESQSERSQLKNRELALKRLQAKLMQQ 300 Query: 288 ELQKREEIANIG-ESSKTEIGWGRQIRSY 315 +L+ E ++ + + +IR+Y Sbjct: 301 QLESSEATKQATRKAQQGNLNRNEKIRTY 329 >gi|289706369|ref|ZP_06502727.1| peptide chain release factor 1 [Micrococcus luteus SK58] gi|289556864|gb|EFD50197.1| peptide chain release factor 1 [Micrococcus luteus SK58] Length = 369 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 98/250 (39%), Positives = 143/250 (57%), Gaps = 12/250 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D LE+ G GG E+ +A LLRMY R+AE R +KTE L + G K + + Sbjct: 110 DARDVILEIKGGEGGEEAALFAGDLLRMYLRYAESRGWKTEVLSATHSDLGGYKDVHVAV 169 Query: 173 KGPNA------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +G A Y LK E GVHR+ R+ +S R HTS + + V P VD E+ + + Sbjct: 170 RGSAADPADGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPN 229 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D ++D +R+SG GGQ VNTTDSAVR+TH+PTG+VV Q E+SQ +N+ A +LR++L Sbjct: 230 DLKVDVFRSSGPGGQSVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRL-- 287 Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 LE Q+ E+ A + ++ +IR+Y P + D RT + + VLDGDL Sbjct: 288 LERQRAEQDAEDSAARAAQVRTMDRSERIRTYNF-PENRIADHRTGYKAHNLDAVLDGDL 346 Query: 344 DDFMKATLAI 353 + + + LA+ Sbjct: 347 EAVIASCLAL 356 >gi|113954440|ref|YP_729638.1| peptide chain release factor 1 [Synechococcus sp. CC9311] gi|119361628|sp|Q0ID34|RF1_SYNS3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|113881791|gb|ABI46749.1| peptide chain release factor 1 [Synechococcus sp. CC9311] Length = 364 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 117/348 (33%), Positives = 181/348 (52%), Gaps = 33/348 (9%) Query: 24 SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILL----- 73 SF N + + DP + + + + RER L+ + + +++++ LL Sbjct: 16 SFHNLERQLADPDVAADPQRLETIARERSRLEPLVLDYTSLQKVEAEQVQAKSLLKESRG 75 Query: 74 ELALEEDDCSILQET----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + A+EE LQE +D +QRI L + L D LE+ AGAGG E Sbjct: 76 DAAMEELAQQELQELDRHHADLIQRITLAL-------LPKDPRDERSVMLEIRAGAGGDE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + WA L RMY R++ +R + + ++ + G K L +KG + LK E GVHR Sbjct: 129 ACLWAGDLARMYERFSSRRGWSVTPVSANEADLGGYKELILSVKGDAVFSELKFEAGVHR 188 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P D +E++I D I T R+ GAGGQ+VN ++A Sbjct: 189 VQRVPSTESQGRVHTSTATVAVMPEAD-PVEVQIDPRDLDISTARSGGAGGQNVNKVETA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEIG 307 V + H PTG+ V C QERSQ +N+ +A +LRAKLYE +L + AN E S ++++G Sbjct: 248 VDLMHKPTGIRVFCTQERSQMQNRERALEILRAKLYERQLAE----ANASERSARRSQVG 303 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y + +M D R S VL+G +DD + A +A Sbjct: 304 TGDRSEKIRTYNAKDNRMT-DHRLG-RNFSLDPVLEGQMDDVIDACIA 349 >gi|15672577|ref|NP_266751.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis Il1403] gi|13878663|sp|Q9CHX3|RF1_LACLA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|12723487|gb|AAK04693.1|AE006292_13 peptide chain release factor 1 [Lactococcus lactis subsp. lactis Il1403] gi|326406096|gb|ADZ63167.1| peptide chain release factor RF-1 [Lactococcus lactis subsp. lactis CV56] Length = 357 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 114/356 (32%), Positives = 184/356 (51%), Gaps = 27/356 (7%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD ++ V R L DP + + L RE L + ++ K++ + + D Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60 Query: 69 NLILL-ELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVH 122 + +L E L++D +L+E +S Q+ LE E K +L D ND LE+ Sbjct: 61 SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIK----ILLLPKDPNDGKNIILEIR 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A LL MY ++E + +K E +E + G K + LI GP+ Y LK Sbjct: 117 GAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLK 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ ++ R HTS +++ V P V++ E+ I + D R+D Y ASGAGGQ+ Sbjct: 177 YESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEE-FEMTIDQKDLRVDIYHASGAGGQN 235 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ELELQKREEIA 296 VN +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A +L K++ EL+ Q E + Sbjct: 236 VNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKS 295 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G ++E +IR+Y P V D R + +L G +D+ + A + Sbjct: 296 TVGTGDRSE-----RIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIV 345 >gi|47096965|ref|ZP_00234541.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a F6854] gi|47014675|gb|EAL05632.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a F6854] Length = 314 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 97/281 (34%), Positives = 159/281 (56%), Gaps = 10/281 (3%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 ++D AV+ R LN DP + + + L +E+ + + +E + +++ + Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125 LL L+++ + +E LQ+ K ++E + LL D ND LE+ A Sbjct: 61 TKELLGEKLDDEMREMAKEEFAELQKEKADLEERL--KLLLVPKDPNDDKNVILEIRGAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E Sbjct: 119 GGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYEN 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT+ ++GAGGQ VNT Sbjct: 179 GAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 T SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ Sbjct: 238 TMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYD 278 >gi|159899315|ref|YP_001545562.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC 23779] gi|159892354|gb|ABX05434.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC 23779] Length = 365 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 94/247 (38%), Positives = 139/247 (56%), Gaps = 10/247 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ G GG E+ + + RMY R+AE R +KTE + + + G K + Sbjct: 110 DEKNVIIEIRQGEGGDEAALFGADVYRMYQRYAEIRGWKTEVMSLSENGIGGFKEVIFEV 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G A+ LK E GVHR+ R+ ++ R HTS ++ V P V+++ +EI + D RID Sbjct: 170 QGQGAWSRLKYEGGVHRVQRVPATEARGRIHTSTITVAVLPEVEETA-VEIKQEDYRIDV 228 Query: 233 YRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 YR+ G GGQ VNTTDSAVRI + P +VV CQ RSQ KN+ A N+LRA+LY E Sbjct: 229 YRSGGHGGQGVNTTDSAVRIVYKAGTPEEIVVVCQDTRSQIKNRESALNVLRARLYAREQ 288 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +KR++ +GES ++G G ++R+Y P + D R ++ VLDG LD Sbjct: 289 EKRQK--ELGESRLAQVGSGERAEKMRTYNY-PQDRITDHRIGQNISNLPVVLDGALDRL 345 Query: 347 MKATLAI 353 + A + Sbjct: 346 IDALVTF 352 >gi|318042535|ref|ZP_07974491.1| peptide chain release factor 1 [Synechococcus sp. CB0101] Length = 365 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 116/351 (33%), Positives = 168/351 (47%), Gaps = 27/351 (7%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D A L + DP + N + + + RER L+ + E+Q EL Sbjct: 11 DAARTTFDTLERQLADPDVAANPAQLEPIARERARLEPLVMGYDELQTLQGQEQQARELL 70 Query: 77 LEED---DCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D L +E ++ RI E L D LE+ AGAGG E+ Sbjct: 71 RESRGDLDLEALAQEELAELATRISALEEQLTLALLPRDPRDERSVMLEIRAGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 WA L RMY R+A+ +K + + + E G K L IKG + LK E GVHR+ Sbjct: 131 LWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIKGDGVFSQLKFEAGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P D +E++I D I T R+ GAGGQ+VN ++AV Sbjct: 191 RVPATESQGRVHTSTATVAVMPEA-DPVEVQIDPGDLEISTARSGGAGGQNVNKVETAVD 249 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL------QKREEIANIGESSKTE 305 + H PTG+ V C QERSQ +N+ +A +LRAKLYE EL ++ +A +G ++E Sbjct: 250 LLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELATANAEERSARLAQVGTGDRSE 309 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 +IR+Y KD RT + S VL G L + + A ++ Sbjct: 310 -----KIRTY------NYKDNRTTDHRLGRNFSLEPVLQGQLAELIGACVS 349 >gi|147818957|emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera] Length = 1542 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 40/248 (16%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD D LEV AG GG E+ +A + +MY ++++K +K E ++I + + G K A+ Sbjct: 1313 EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASG 1372 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G YG LK E G+HR+ +++++ D RI Sbjct: 1373 AISGSGVYGKLKFESGIHRV---------------------------QVDVQLRNEDLRI 1405 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-- 288 DTYR+ G+GGQH NTT+SAVRITHIP+G+ V Q ERSQH NKA+A +L AKLYE+E Sbjct: 1406 DTYRSGGSGGQHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERS 1465 Query: 289 -LQK---REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DL 343 +QK + + IG ++E +IR+Y P V D R I S +DV+ G +L Sbjct: 1466 RIQKDRSKLRMEQIGSGDRSE-----RIRTYNF-PQGRVTDHRVGITHHSVNDVMQGENL 1519 Query: 344 DDFMKATL 351 D F+ A L Sbjct: 1520 DVFIDALL 1527 >gi|195116636|ref|XP_002002858.1| GI17608 [Drosophila mojavensis] gi|193913433|gb|EDW12300.1| GI17608 [Drosophila mojavensis] Length = 393 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/248 (38%), Positives = 141/248 (56%), Gaps = 11/248 (4%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLL------SGEADSNDAYLEVHAGAGGT 128 LA +++D L E +N+ L KQ E +L S + D EV+AGAGG Sbjct: 85 LAEKDEDMRALMEEENNVYTSLLR---KQEEDMLQELLALSDDEDYPAVIFEVNAGAGGQ 141 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L MYT + + ++ E + + G++ A L + P AY WL+ E GVH Sbjct: 142 EAMLFAQELYDMYTSYFDHMGWEYEEFDRETTDIGGLRHANLQVNDPEAYNWLRFEAGVH 201 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ + + R HTS +SI V P D ++++I+E D +I+T RASGAGGQHVNTTDS Sbjct: 202 RVQRVPATEKSGRIHTSTASITVIPRPAD-VQVQIAERDLKIETKRASGAGGQHVNTTDS 260 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG-ESSKTEIG 307 AVRI H+P+G+ V+ Q ERSQ KN+ A L+AKL +LQ E ++ + + Sbjct: 261 AVRIVHLPSGLAVESQSERSQLKNREVALKRLQAKLIHQQLQSAEATKKATRKAQQGNLN 320 Query: 308 WGRQIRSY 315 +IR+Y Sbjct: 321 RNEKIRTY 328 >gi|296111565|ref|YP_003621947.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154] gi|295833097|gb|ADG40978.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154] Length = 357 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 112/345 (32%), Positives = 182/345 (52%), Gaps = 30/345 (8%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-------FIKEIQDR--LCDNL 70 V R LN + DP + + + L++E + + ++ I+EIQD + D+ Sbjct: 12 VDRYDELNEQLADPEVAGDGQKYMALLKEAGEMRDTVAAYTRYKQVIQEIQDAEDMLDDD 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGG 127 L LA +ED ++ E SD LE + K +L D ND +E+ AGG Sbjct: 72 ELAPLA-KEDLNTLRPEKSD------LEAQLK----ILMLPKDPNDDKNIIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A LL MY R+AEK+++ ++ E G K ++I G N Y LK E G Sbjct: 121 DESSLFAADLLDMYRRYAEKQRWALSIIDETTTEVGGYKEVAIMISGDNVYSKLKFESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P ++ I+ E++ESD + +R+ GAGGQ+VN Sbjct: 181 HRVQRVPSTETQGRVHTSTATVGVMPEFEE-IDFELAESDLEEEFFRSGGAGGQNVNKVS 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVR+ H PTG++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E A E K+ +G Sbjct: 240 TAVRLVHKPTGMMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--AEYAEKRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 G +IR+Y P V D R + +++GDL + + A Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGDLGEIIDA 341 >gi|71028468|ref|XP_763877.1| peptide chain release factor 2 [Theileria parva strain Muguga] gi|68350831|gb|EAN31594.1| peptide chain release factor 2, putative [Theileria parva] Length = 376 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 87/249 (34%), Positives = 135/249 (54%), Gaps = 18/249 (7%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE----------KRKFKTEALEIHDGEE 162 D N L + +G GG+ES DW +L MY ++ + + +++ G Sbjct: 83 DRNYCKLIIKSGVGGSESFDWCRILAEMYKKFISSYDPPPGPNLPTSLRLKEVDVCPGTS 142 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-- 220 G + + G AY LKGE G HRL+R SP++S+ +R T+F+++ P++ D+ E Sbjct: 143 GGFRRVEYDVIGDYAYRLLKGENGTHRLIRNSPFNSDHKRQTTFATVQAVPILSDTDEEI 202 Query: 221 ------IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +I + D I++ R+SG GGQ+VN ++AVR+ H PTG+ V+ QQER+ +N+ Sbjct: 203 INFKKNRQILKKDLIIESMRSSGKGGQNVNKVETAVRVYHKPTGLSVKVQQERTNTQNRE 262 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML + E L+K E + + + WG IR+Y L P Q VKD RTN E Sbjct: 263 IAIRMLTKLVDEHYLKKLNEKLDDIKGADLVGTWGSHIRTYTLNPEQRVKDHRTNFETAK 322 Query: 335 PSDVLDGDL 343 ++VL+GDL Sbjct: 323 ATNVLNGDL 331 >gi|40062727|gb|AAR37632.1| peptide chain release factor 1, degenerate [uncultured marine bacterium 438] Length = 358 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 95/247 (38%), Positives = 139/247 (56%), Gaps = 6/247 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD +A +E+ AG GG E+ +A L +MY + + ++K++ E + + E G+K Sbjct: 105 EADKKNAIIEIRAGTGGLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIA 164 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I+G N Y LK E G + S Y ++ T W + ++I+I++SD RI Sbjct: 165 SIRGKNIYSTLKYESGSSSCSKSSRYRNSREEFTLLQQQWAVLPEAEEVDIKINDSDLRI 224 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D +RA G GGQ VNTTDSAVRITHIPTG+ V Q ++SQHKNKA+ +LR++LYELE Sbjct: 225 DVFRAGGPGGQSVNTTDSAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERS 284 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E E K++IG G +IR+Y P V D R N+ L+G+ D M Sbjct: 285 RIE--GERSEDRKSKIGTGDRSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEM 341 Query: 348 KATLAIK 354 +L ++ Sbjct: 342 VESLTLQ 348 >gi|281491061|ref|YP_003353041.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis KF147] gi|281374819|gb|ADA64339.1| Peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp. lactis KF147] Length = 357 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 114/356 (32%), Positives = 184/356 (51%), Gaps = 27/356 (7%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD ++ V R L DP + + L RE L + ++ K++ + + D Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLCDKVATYNDYKKVLETISD 60 Query: 69 NLILL-ELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVH 122 + +L E L++D +L+E +S Q+ LE E K +L D ND LE+ Sbjct: 61 SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIK----ILLLPKDPNDGKNIILEIR 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A LL MY ++E + +K E +E + G K + LI GP+ Y LK Sbjct: 117 GAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLK 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ ++ R HTS +++ V P V++ E+ I + D R+D Y ASGAGGQ+ Sbjct: 177 YESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEE-FEMTIDQKDLRVDIYHASGAGGQN 235 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ELELQKREEIA 296 VN +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A +L K++ EL+ Q E + Sbjct: 236 VNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKS 295 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G ++E +IR+Y P V D R + +L G +D+ + A + Sbjct: 296 TVGTGDRSE-----RIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIV 345 >gi|33866628|ref|NP_898187.1| peptide chain release factor 1 [Synechococcus sp. WH 8102] gi|46576726|sp|Q7U4H2|RF1_SYNPX RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33633406|emb|CAE08611.1| peptide chain release factor RF-1 [Synechococcus sp. WH 8102] Length = 365 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 114/344 (33%), Positives = 182/344 (52%), Gaps = 25/344 (7%) Query: 24 SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ----DRLCDNLILLEL-- 75 SF N + + DP + + + + RER L+ + +E+Q ++ +L E Sbjct: 16 SFRNLERQLADPDVAADPTRLEKIARERARLEPLVLDFEELQVLEGEQKQSRELLKECRG 75 Query: 76 --ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132 A+EE + Q+ +L R E+ K +LL + D LE+ AGAGG E+ Sbjct: 76 DAAMEE----LAQDDLASLNRRHAELTEKLTVALLPRDPRDERSVMLEIRAGAGGDEACI 131 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA L RMY R+++K + + + ++ + G + L +KG + + LK E GVHR+ R Sbjct: 132 WAGDLARMYERYSQKLGWNVQPISSNEADLGGFRELILSVKGDSVFSQLKFEAGVHRVQR 191 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P D++E+++ D I T R+ GAGGQ+VN ++AV + Sbjct: 192 VPATESQGRVHTSTATVAVMPEA-DAVEVQLDPKDLEISTARSGGAGGQNVNKVETAVDL 250 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 H P+G+ V C QERSQ +N+ +A +LRAKL LE ++RE A + ++G G Sbjct: 251 LHKPSGIRVFCTQERSQLQNRERALEILRAKL--LEQEQREAAARESSDRRAQVGSGD-- 306 Query: 313 RSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 RS ++ Y KD RT + S VLDG L+D + A +A Sbjct: 307 RSEKIRTYNY-KDNRTTDHRLGRNFSLDPVLDGQLEDLIGACIA 349 >gi|88855314|ref|ZP_01129978.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1] gi|88815221|gb|EAR25079.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1] Length = 359 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 101/248 (40%), Positives = 145/248 (58%), Gaps = 12/248 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS D +E+ G GG ES +A LLRMY +AE +K+KTE +E + GIK L + Sbjct: 100 DSRDVIMEIKMGEGGAESALFAGDLLRMYLHYAESKKWKTEIIEQTSSDLGGIKDVQLAV 159 Query: 173 KG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG P W LK E GVHR+ R+ +S R HTS + + V+P VD+ E+EIS++ Sbjct: 160 KGNSSDPAEGVWAHLKYEGGVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEISQN 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ +LRA++ Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARI-- 277 Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L + E A E K++I +IR+Y P + D RT + + ++G L Sbjct: 278 LARYQEEADAEASEYRKSQIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDQAINGAL 336 Query: 344 DDFMKATL 351 + +++ + Sbjct: 337 EPVIQSCI 344 >gi|37523990|ref|NP_927367.1| peptide chain release factor 1 [Gloeobacter violaceus PCC 7421] gi|46576716|sp|Q7ND15|RF1_GLOVI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|35214996|dbj|BAC92362.1| translation releasing factor RF-1 [Gloeobacter violaceus PCC 7421] Length = 364 Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 105/336 (31%), Positives = 184/336 (54%), Gaps = 16/336 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T+ DP L N E ++R R L+ + Q RLC + + ++ L Sbjct: 21 LTTRLGDPSLASNPQEMLRIVRMRAGLERTVEAYDHWQ-RLCAERNAVRQMIRDEQDPEL 79 Query: 86 QETSDNLQRIKLEVEYKQFE---SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLR 139 +E ++ + LE + E +LL D ND LE+ AG GG E+ +A L+R Sbjct: 80 RELAEE-EHTGLEERIARLEDEITLLLLPRDPNDDKNVMLEIRAGTGGDEAAIFAGDLMR 138 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+AE + + + E G K L I+G + Y LK E GVHR+ R+ ++ Sbjct: 139 MYIRYAEGQGWSVKLASESPAEMGGFKEVILEIRGESVYSKLKFEAGVHRVQRVPVTETQ 198 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ + P V++ +++EI+ +D I T R+ GAGGQ+VN ++AV + H P+G+ Sbjct: 199 GRVHTSTATVAIMPEVEE-VDVEINPNDIEITTTRSGGAGGQNVNKVETAVHLVHKPSGI 257 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 + CQ+ERSQ +NKA+A +LR KLY ++++RE+ + ++++G G +IR+Y Sbjct: 258 HIHCQEERSQLQNKARAMQILRVKLY--DIKQREQHEQVSGLRRSQVGTGDRSEKIRTYN 315 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + + V D R + + + + ++G+++ +++ +A Sbjct: 316 YKDNR-VTDHRLS-QNFTLNTAIEGEIETLIQSAIA 349 >gi|239917332|ref|YP_002956890.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus luteus NCTC 2665] gi|281414188|ref|ZP_06245930.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus luteus NCTC 2665] gi|239838539|gb|ACS30336.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus luteus NCTC 2665] Length = 369 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 97/250 (38%), Positives = 143/250 (57%), Gaps = 12/250 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D LE+ G GG E+ +A LLRMY R+A+ R +KTE L + G K + + Sbjct: 110 DARDVILEIKGGEGGEEAALFAGDLLRMYLRYADSRGWKTEVLSATHSDLGGYKDVHVAV 169 Query: 173 KGPNA------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +G A Y LK E GVHR+ R+ +S R HTS + + V P VD E+ + + Sbjct: 170 RGSAADPADGVYARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPN 229 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D ++D +R+SG GGQ VNTTDSAVR+TH+PTG+VV Q E+SQ +N+ A +LR++L Sbjct: 230 DLKVDVFRSSGPGGQSVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRL-- 287 Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 LE Q+ E+ A + ++ +IR+Y P + D RT + + VLDGDL Sbjct: 288 LERQRAEQDAEDSAARAAQVRTMDRSERIRTYNF-PENRIADHRTGYKAHNLDAVLDGDL 346 Query: 344 DDFMKATLAI 353 + + + LA+ Sbjct: 347 EAVIASCLAL 356 >gi|73989054|ref|XP_848713.1| PREDICTED: similar to mitochondrial translational release factor 1 isoform 2 [Canis familiaris] Length = 444 Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 116/318 (36%), Positives = 165/318 (51%), Gaps = 37/318 (11%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQ---------DRLCDNLI------LLELALE 78 HL N + K L R L + +EIQ D +C +L L ELALE Sbjct: 94 HLSVNEGDRKSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALE 153 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWA 134 E Q ++ K+ V Y + F+SL+ E D ND +EV +G GG Q + Sbjct: 154 ER-----QTIAE-----KINVLYSELFQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFT 203 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + MY ++ + +K E L + G+ A I G N Y LK E GVHR+ RI Sbjct: 204 REIFDMYQNYSSYKNWKFELLNYTPADYGGLHHAAARISGDNVYKHLKYEGGVHRVQRIP 263 Query: 195 PYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 ++R HT S+ V P D+ +++++ D RIDT+RA GAGGQHVNTTDSAVR Sbjct: 264 EVGLSARMQRIHTGTMSVIVLPQPDE-VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVR 322 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + HIPTG+VV+CQQERSQ KNK A +LRA+LY+ ++K + S ++ G + Sbjct: 323 LVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEK----DKCQQQSTRKLQVGTR 378 Query: 312 IRSYVLQPYQMVKDLRTN 329 +S ++ Y +D T+ Sbjct: 379 AQSERIRTYNFTQDRVTD 396 >gi|115486501|ref|NP_001068394.1| Os11g0657100 [Oryza sativa Japonica Group] gi|77552370|gb|ABA95167.1| Peptide chain release factor 1, putative, expressed [Oryza sativa Japonica Group] gi|113645616|dbj|BAF28757.1| Os11g0657100 [Oryza sativa Japonica Group] gi|215686469|dbj|BAG87730.1| unnamed protein product [Oryza sativa Japonica Group] gi|215694739|dbj|BAG89930.1| unnamed protein product [Oryza sativa Japonica Group] gi|218186139|gb|EEC68566.1| hypothetical protein OsI_36894 [Oryza sativa Indica Group] gi|222616368|gb|EEE52500.1| hypothetical protein OsJ_34701 [Oryza sativa Japonica Group] Length = 416 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 168/300 (56%), Gaps = 15/300 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---EDDC 82 ++ + DP + + E + L + LD +S ++ +D C+ I L+ EDD Sbjct: 68 MSVRLADPDIVSDPSEYQKLAQSVAELDQVVSTYRQFKD--CEKQIEETKVLQKENEDDP 125 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEA----DSNDAYLEVHAGAGGTESQDWANMLL 138 + + ++ + ++E + + L D+ + LEV AGAGG E+ WA L+ Sbjct: 126 DMAEMIDSEMESLSNQLEELEEKLKLLLLPNDPLDARNILLEVRAGAGGDEAGIWAGDLV 185 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY ++ E+ +K + + + E+ G K+ + +KG Y LK E GVHR+ R+ ++ Sbjct: 186 RMYQKYCERNSWKFKPVSSSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRVQRVPQTET 245 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS +++ + P D+ +++ I D + T R+ GAGGQ+VN ++AV + H PTG Sbjct: 246 MGRVHTSTATVAIMPEADE-VDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTG 304 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 + + C +ERSQ +N+ +A+ +LRAKLYE++L++++E +I K ++G G +IR+Y Sbjct: 305 IRIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQE--SIRNQRKLQVGTGARSEKIRTY 362 >gi|294786650|ref|ZP_06751904.1| peptide chain release factor 1 [Parascardovia denticolens F0305] gi|315226253|ref|ZP_07868041.1| peptide chain release factor RF1 [Parascardovia denticolens DSM 10105] gi|294485483|gb|EFG33117.1| peptide chain release factor 1 [Parascardovia denticolens F0305] gi|315120385|gb|EFT83517.1| peptide chain release factor RF1 [Parascardovia denticolens DSM 10105] Length = 366 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 140/240 (58%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK------ 166 D+ D +E+ AGAGG E+ +A LLRMYTR+AEKR + TE + + E G+K Sbjct: 105 DARDTIMEIKAGAGGEEAALFAGDLLRMYTRYAEKRSWSTEIMSQNMTELGGVKDIQIAF 164 Query: 167 -SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 S ++ + LK E GVHR+ RI +S R TS + + V+P DD EIE+ Sbjct: 165 RSKGVVAPADGVWASLKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADDDDDEIEVD 224 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +ID + +SG GGQ VNTT SAVR+THIPTG+VV Q E+SQ +N+ A +L+++L Sbjct: 225 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRQAALRVLKSRL 284 Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ ++ +E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 285 LAMKHEEEAQEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 343 >gi|125623422|ref|YP_001031905.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris MG1363] gi|166223566|sp|A2RIR4|RF1_LACLM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|124492230|emb|CAL97159.1| peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp. cremoris MG1363] gi|300070169|gb|ADJ59569.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris NZ9000] Length = 357 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 113/356 (31%), Positives = 184/356 (51%), Gaps = 27/356 (7%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD ++ V R L DP + + L RE L + ++ K++ + + D Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60 Query: 69 NLILL-ELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVH 122 + +L E L+++ +L+E +S Q+ LE E K +L D ND LE+ Sbjct: 61 SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIK----ILLLPKDPNDGKNIILEIR 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A LL MY ++E + +K E +E + G K + LI GP+ Y LK Sbjct: 117 GAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLK 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ ++ R HTS +++ V P V++ E+ I + D R+D Y ASGAGGQ+ Sbjct: 177 YESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEE-FEMTIEQKDLRVDIYHASGAGGQN 235 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ELELQKREEIA 296 VN +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A +L K++ EL+ Q E + Sbjct: 236 VNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNTERKS 295 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G ++E +IR+Y P V D R + +L G +D+ + A + Sbjct: 296 TVGTGDRSE-----RIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIV 345 >gi|88807914|ref|ZP_01123425.1| peptide chain release factor 1 [Synechococcus sp. WH 7805] gi|88787953|gb|EAR19109.1| peptide chain release factor 1 [Synechococcus sp. WH 7805] Length = 365 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 114/346 (32%), Positives = 174/346 (50%), Gaps = 25/346 (7%) Query: 22 RLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 R SF N + + DP + + + + RER L+ ++ +Q + EL + Sbjct: 14 RDSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYTSLQSVQAEREQARELLRD- 72 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLL---------SGEADSNDAYLEVHAGAGGTES 130 S E NL +++LE K+ E L+ D LE+ AGAGG E+ Sbjct: 73 ---SRGDEEMANLAQLELEELDKRHEVLIQRLTLALLPKDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R++ +R + + + + + G K L +KG + + LK E GVHR+ Sbjct: 130 CLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGDSVFSELKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I +D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEAD-PVEVQIEPADLEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 + H P+G+ V C QERSQ +N+ +A +LRAKLYE +L + AN ESS G Sbjct: 249 DLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQLAE----ANARESSARRAQVGT 304 Query: 311 QIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 RS ++ Y KD R + S VL G ++D + A +A Sbjct: 305 GDRSEKIRTYN-AKDNRVTDHRLGRNFSLDPVLQGQMEDVIGACIA 349 >gi|72382938|ref|YP_292293.1| peptide chain release factor 1 [Prochlorococcus marinus str. NATL2A] gi|119361577|sp|Q46IT8|RF1_PROMT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|72002788|gb|AAZ58590.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus marinus str. NATL2A] Length = 365 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 117/357 (32%), Positives = 193/357 (54%), Gaps = 26/357 (7%) Query: 14 FDWDNAVQRL-----SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAIS-FIK-EIQD 64 D ++RL SF N + + DP + + + + + RER L+ ++ ++K +I + Sbjct: 1 MDSSTLIKRLETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIE 60 Query: 65 RLC-DNLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEV 121 + C + L++ + ++ + +L +E NL+ K E+ K +LL + D LE+ Sbjct: 61 KECLEAKGLVKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG E+ WA L RMY R+ +K + + + + + G + + +KG + Y L Sbjct: 121 RAGAGGNEACLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS +++ V P D +E++I +D I T R+ GAGGQ Sbjct: 181 KFEAGVHRVQRVPSTESQGRVHTSTATVAVMPEAD-PVEVKIESTDLEISTARSGGAGGQ 239 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++A+ + H P+G+ V C QERSQ +N+ +A +LRAKL ELEL + AN E Sbjct: 240 NVNKVETAIDLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELELAE----ANAKER 295 Query: 302 SK--TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352 S +++G G RS ++ Y KD RT + + VL G L+D + A +A Sbjct: 296 SARLSQVGTGD--RSEKIRTYNY-KDNRTTDHRLGVNFPLEQVLSGQLEDVIGACIA 349 >gi|261749210|ref|YP_003256895.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497302|gb|ACX83752.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 364 Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 92/241 (38%), Positives = 142/241 (58%), Gaps = 6/241 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D +A +E+ +G GG E+ + +LRMY + ++ +K + + G G K L Sbjct: 116 ENDHRNAIVELRSGTGGDEACLFVEDILRMYIMYFKQVGWKYKIIHAQKGGIQGYKEIIL 175 Query: 171 LI---KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 + +G YG LK E GVHR+ RI +S R HTS ++ V P + D IE++I SD Sbjct: 176 DVSGKEGEGVYGNLKFESGVHRVQRIPKTESQGRVHTSAITVAVLPEIKD-IEMKIHLSD 234 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 + DT+R+SG+GGQHVN T+SAVR+THIPT + V+CQ+ERSQHKN +A N+LR+++Y+ Sbjct: 235 IKKDTFRSSGSGGQHVNKTESAVRLTHIPTKITVECQEERSQHKNFEKAMNVLRSRIYQN 294 Query: 288 ELQKREEIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E +KR + +I S G +IR+Y P V D R + + ++G++ + Sbjct: 295 EKEKRFKERSIKRKSLVSTGDRSVKIRTYNY-PKGRVTDHRIHKSIYNLVGFMNGNIQEM 353 Query: 347 M 347 + Sbjct: 354 I 354 >gi|116511384|ref|YP_808600.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris SK11] gi|123125765|sp|Q031E4|RF1_LACLS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116107038|gb|ABJ72178.1| bacterial peptide chain release factor 1 (bRF-1) [Lactococcus lactis subsp. cremoris SK11] Length = 357 Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 113/356 (31%), Positives = 184/356 (51%), Gaps = 27/356 (7%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD ++ V R L DP + + L RE L + ++ K++ + + D Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60 Query: 69 NLILL-ELALEEDDCSILQE--TSDNLQRIKLEVEYKQFESLLSGEADSNDA---YLEVH 122 + +L E L+++ +L+E +S Q+ LE E K +L D ND LE+ Sbjct: 61 SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIK----ILLLPKDPNDGKNIILEIR 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A LL MY ++E + +K E +E + G K + LI GP+ Y LK Sbjct: 117 GAAGGDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLK 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ ++ R HTS +++ V P V++ E+ I + D R+D Y ASGAGGQ+ Sbjct: 177 YESGAHRVQRVPVTETQGRVHTSTATVLVMPEVEE-FEMTIEQKDLRVDIYHASGAGGQN 235 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ELELQKREEIA 296 VN +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A +L K++ EL+ Q E + Sbjct: 236 VNKVATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKS 295 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G ++E +IR+Y P V D R + +L G +D+ + A + Sbjct: 296 TVGTGDRSE-----RIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIV 345 >gi|149730260|ref|XP_001492759.1| PREDICTED: similar to Mitochondrial translational release factor 1 [Equus caballus] Length = 446 Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 119/324 (36%), Positives = 174/324 (53%), Gaps = 34/324 (10%) Query: 45 LMRERQHLDNAISFIKEIQDRLC--DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + RE Q + AI ++ + L D L ELALEE ++ Q KL Y+ Sbjct: 120 IYREIQEAEQAIEELESMCKSLNKQDEKQLQELALEERQ-TVAQ---------KLNALYR 169 Query: 103 Q-FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + F+SL+ E D ND LEV +G GG Q + + MY ++ +++K E L Sbjct: 170 ELFQSLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKRWKFELLNYT 229 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVV 215 + G+ A I G + Y LK E G+HR+ RI +SR HT S+ V P Sbjct: 230 PADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQP 289 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D+ +++++ D RIDT+RA GAGGQHVNTTDSAVR+ H+PTG+VV+CQQERSQ KNK Sbjct: 290 DE-VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIKNKEI 348 Query: 276 AWNMLRAKLYE--LELQKREEIA----NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 A +LRA+LY+ +E KR++ + +G +++E +IR+Y V D R Sbjct: 349 ALRVLRARLYQQIIEKDKRQQQSARKLQVGTRAQSE-----RIRTYNFTQ-DRVTDHRIA 402 Query: 330 IEKTSPSDVLDGD--LDDFMKATL 351 E + + L G+ LD ++ L Sbjct: 403 YEVRNIKEFLHGEKCLDHLIQRLL 426 >gi|301617313|ref|XP_002938091.1| PREDICTED: LOW QUALITY PROTEIN: peptide chain release factor 1, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 446 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 108/288 (37%), Positives = 155/288 (53%), Gaps = 24/288 (8%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAG--AGGT 128 +L LALEE + N+ +++ K ++LL E D NDA LEV +G GG Sbjct: 148 MLALALEEKNT-----LKQNINKLR----GKLLQALLPHEKYDMNDAVLEVTSGRTTGGD 198 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 Q + + MY +A + + E L E G+ A I G Y LK E G H Sbjct: 199 ICQQFTKEIFDMYQNYAYYKSWSFEILNYSPAEYGGLHHAAARISGEGVYKRLKYEGGTH 258 Query: 189 RLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 R+ RI +SR HT ++ V P D+ +E++I D RIDT+R+ GAGGQHVNT Sbjct: 259 RVQRIPEVGLSSRMQRIHTGTMTVIVLPQPDE-VEVKIDSKDLRIDTFRSKGAGGQHVNT 317 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRI HIPTG+ V+CQQERSQ NK +A +LR +LYE ++ +E+ + K + Sbjct: 318 TDSAVRIVHIPTGIAVECQQERSQIANKEKALRILRMRLYEQTVE--QELLERRSARKLQ 375 Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMK 348 +G Q IR+Y ++ D R + E + + L+G+ LDD ++ Sbjct: 376 VGTRAQSERIRTYNFTQDRLT-DHRIHYEVRNIKEFLNGEELLDDLIQ 422 >gi|301760227|ref|XP_002915915.1| PREDICTED: peptide chain release factor 1, mitochondrial-like [Ailuropoda melanoleuca] gi|281349098|gb|EFB24682.1| hypothetical protein PANDA_003948 [Ailuropoda melanoleuca] Length = 445 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 111/293 (37%), Positives = 159/293 (54%), Gaps = 29/293 (9%) Query: 50 QHLDNAISFIKEIQDRLCDNL------ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103 Q + A I+E+ D +C +L L ELALEE +I Q K+ + Y + Sbjct: 121 QEIQEAEQAIEEL-DSMCKSLNKQDEKQLQELALEERQ-TIAQ---------KINMLYSE 169 Query: 104 -FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 F+SL+ E D ND LEV AG GG Q + + MY ++ + +K E L Sbjct: 170 LFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSSYKNWKFELLNYTP 229 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVD 216 + G+ A I G + Y LK E G+HR+ RI +SR HT S+ V P D Sbjct: 230 ADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPD 289 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +++++ D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK A Sbjct: 290 E-VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIA 348 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +LRA+LY+ ++K + S ++ G + +S ++ Y +D T+ Sbjct: 349 LRVLRARLYQQIIEK----DKCQQQSTRKLQVGTRAQSERIRTYNFTQDRVTD 397 >gi|257058120|ref|YP_003136008.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802] gi|256588286|gb|ACU99172.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802] Length = 370 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 89/243 (36%), Positives = 146/243 (60%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMY+R+AE +K+ + + + G K A L I Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ ++ R HTS +++ + P VDD +E++I D I T Sbjct: 172 QGDRVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEVQIDAKDIEITT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + + P G+ + C +ERSQ +N+ +A +LRAKLYEL+L R Sbjct: 231 ARSGGAGGQNVNKVETAVDLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYELKL--R 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + K+++G G +IR+Y + + V D R + S + L+GD+++ +++ Sbjct: 289 EQQDAVSSMRKSQVGTGARSEKIRTYNYKDNR-VTDHRLG-QNFSLAGTLEGDIEEIIQS 346 Query: 350 TLA 352 ++ Sbjct: 347 CIS 349 >gi|164424709|ref|XP_960901.2| hypothetical protein NCU06721 [Neurospora crassa OR74A] gi|157070629|gb|EAA31665.2| hypothetical protein NCU06721 [Neurospora crassa OR74A] Length = 415 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 28/292 (9%) Query: 77 LEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQD 132 LE DD + Q +D+L K LE + L+ + D +E+H G GGTE + Sbjct: 79 LESDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPGPGGTEGRH 138 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGE 184 +A+ L RMY R+ E + + + + E E I A L + P A+ +GE Sbjct: 139 FADTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPGAFAAFRGE 198 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPV-----VDDSIEIEISESDCRIDT------- 232 G+HR+ RI + R HTS ++WV P D + ESD +D Sbjct: 199 AGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVDPTEVKSEK 258 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVN T+SA+R+THIPTG+ V Q RSQ +N+ +AW +LR+++ L ++R Sbjct: 259 MRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRIASLRREQR 318 Query: 293 EEIA-NIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 E A ++ +S S++++ G +IR+Y Q D R+ ++ + +VL G Sbjct: 319 EAQAKDLRDSVLSQSQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQG 369 >gi|3328106|gb|AAD12759.1| translational release factor 1 [Homo sapiens] Length = 445 Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 113/287 (39%), Positives = 159/287 (55%), Gaps = 33/287 (11%) Query: 45 LMRERQHLDNAI----SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100 + +E Q + AI S K + R D LLELALEE ++T D K+ + Sbjct: 119 IYQETQETEQAIEELGSMCKSLNKR--DEKQLLELALEE------RQTIDQ----KINML 166 Query: 101 YKQ-FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 Y + F+SL+ E D ND LEV AG GG Q + + MY ++ + ++ E L Sbjct: 167 YNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFEPLN 226 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYP 213 + G+ A I G Y LK E G+HR+ RI +SR HT S+ V P Sbjct: 227 YTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLP 286 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D+ +++++ D RIDT+RA GAGGQHVN TDSAVR+ HIPTG+VV+CQQERSQ KNK Sbjct: 287 QPDE-VDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNK 345 Query: 274 AQAWNMLRAKLYE--LELQKREEIANIGESSKTEIGWGRQ---IRSY 315 A+ +LRA+LY+ +E KR++ + + K ++G Q IR+Y Sbjct: 346 EIAFRVLRARLYQQIIEKDKRQQQS----ARKLQVGTRAQSERIRTY 388 >gi|28950278|emb|CAD71246.1| related to translation releasing factor RF-1, mitochondrial [Neurospora crassa] Length = 430 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 28/292 (9%) Query: 77 LEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQD 132 LE DD + Q +D+L K LE + L+ + D +E+H G GGTE + Sbjct: 94 LESDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPGPGGTEGRH 153 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGE 184 +A+ L RMY R+ E + + + + E E I A L + P A+ +GE Sbjct: 154 FADTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPGAFAAFRGE 213 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPV-----VDDSIEIEISESDCRIDT------- 232 G+HR+ RI + R HTS ++WV P D + ESD +D Sbjct: 214 AGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVDPTEVKSEK 273 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVN T+SA+R+THIPTG+ V Q RSQ +N+ +AW +LR+++ L ++R Sbjct: 274 MRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRIASLRREQR 333 Query: 293 EEIA-NIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 E A ++ +S S++++ G +IR+Y Q D R+ ++ + +VL G Sbjct: 334 EAQAKDLRDSVLSQSQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQG 384 >gi|213026460|ref|ZP_03340907.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 201 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 124/202 (61%), Gaps = 6/202 (2%) Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E R+++ E + + +GE G K I G YG LK E G HR+ R+ +S R HTS Sbjct: 1 EARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTS 60 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ Sbjct: 61 ACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQD 120 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYVLQPYQM 322 ERSQHKNKA+A ++L A+++ E KR++ + + +G G + R+Y P Sbjct: 121 ERSQHKNKAKALSVLGARIHAAETAKRQQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGR 177 Query: 323 VKDLRTNIEKTSPSDVLDGDLD 344 V D R N+ + ++G LD Sbjct: 178 VTDHRINLTLYRLDETMEGKLD 199 >gi|78042486|ref|NP_001030185.1| peptide chain release factor 1, mitochondrial precursor [Bos taurus] gi|118573310|sp|Q3MHI7|RF1M_BOVIN RecName: Full=Peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|75773697|gb|AAI05225.1| Mitochondrial translational release factor 1 [Bos taurus] gi|296481791|gb|DAA23906.1| peptide chain release factor 1, mitochondrial precursor [Bos taurus] Length = 447 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 104/265 (39%), Positives = 147/265 (55%), Gaps = 22/265 (8%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE +I Q K+ + Y + F+SLL E D ND LEV +G GG Sbjct: 150 LQELALEERQ-TIAQ---------KINMLYSELFQSLLPKEKYDKNDVILEVTSGRTTGG 199 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G N Y LK E G+ Sbjct: 200 DICQQFTREIFDMYQNYSSYKHWRFELLNYTPADYGGLHHAAARISGDNVYKHLKYEGGI 259 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 260 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPHPDE-VDVKVDPKDLRIDTFRAKGAGGQHVN 318 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+ HIPTG+VV+CQQERSQ KNK A +LRA+LY+ ++K + S Sbjct: 319 TTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEK----DKCQQRSAR 374 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTN 329 ++ G + +S ++ Y +D T+ Sbjct: 375 KLQVGTRAQSERIRTYNFTQDRVTD 399 >gi|194761148|ref|XP_001962794.1| GF14253 [Drosophila ananassae] gi|190616491|gb|EDV32015.1| GF14253 [Drosophila ananassae] Length = 392 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/253 (38%), Positives = 151/253 (59%), Gaps = 18/253 (7%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS---GEADSNDAY----LEVHAGA 125 +EL +ED S++QE + I ++ KQ ++LL AD ++ Y ++AGA Sbjct: 85 MELEKDEDMRSLMQEENA----IYTDLLSKQEQTLLRELLAMAD-DEVYPALIFGINAGA 139 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L MYT + E + + E + GI+ A++++ G +A+ WL+ E Sbjct: 140 GGQEAMLFAQELYEMYTNYFEHKGWDYEEFAHETTDIGGIRHASIMVSGEDAFTWLRHEA 199 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ + + R HTS +SI V P D +++ I++ D +I+T RASGAGGQHVNT Sbjct: 200 GVHRVQRVPATEKSGRMHTSTASITVIPRPAD-VQVHIADKDLKIETKRASGAGGQHVNT 258 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRI H+PTG+ V+ Q ERSQ KN+ A + LR++L + +L+ E A+ + K + Sbjct: 259 TDSAVRIVHLPTGLAVEAQSERSQLKNRELAMSRLRSRLVQRQLESAE--ASTKATKKAQ 316 Query: 306 IG---WGRQIRSY 315 G +IR+Y Sbjct: 317 QGSLNRNEKIRTY 329 >gi|330919897|ref|XP_003298803.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1] gi|311327840|gb|EFQ93110.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1] Length = 416 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/252 (38%), Positives = 145/252 (57%), Gaps = 22/252 (8%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE---IHDGEEAGIK--SATLLIK 173 LE+ GAGG+E+ +A L RMY+ + + F+T ++ I+ EAG+ A + ++ Sbjct: 145 LEIRPGAGGSEAAIFAGDLFRMYSAFCNRNGFRTNLIKYENINGTSEAGVPLSEAIMEVE 204 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI----EIEISESDCR 229 NAYG + E GVHR+ R+ ++ R HTS +S+ V P + ++ + + ESD Sbjct: 205 NENAYGVFRCEAGVHRVQRVPATETKGRTHTSAASVHVLPSLQENSAEEQDFDNPESDYY 264 Query: 230 ID-------TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 ID RASGAGGQHVN T+SAVR+THIPT VV Q RSQHKNK +AW +LRA Sbjct: 265 IDPKEVKLEVMRASGAGGQHVNKTESAVRLTHIPTNTVVAMQDSRSQHKNKEKAWALLRA 324 Query: 283 KLYELELQKR-EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++ + +KR EE+AN+ S ++G G ++R+Y Q V D R+ + DV+ Sbjct: 325 RIAQTRREKREEEMANMRRSVIGVAKMGRGDKVRTYNWG-QQRVTDHRSGMTVHDLDDVM 383 Query: 340 DG--DLDDFMKA 349 G LD M++ Sbjct: 384 GGGQTLDKVMES 395 >gi|163787722|ref|ZP_02182169.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1] gi|159877610|gb|EDP71667.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1] Length = 358 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/262 (32%), Positives = 148/262 (56%), Gaps = 10/262 (3%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 L E D +++++ E+ +F + D+ + +EV AG GG E+ +A L RMY+++ Sbjct: 81 LDEAKDTIEKLEEEI---RFMLIPKDPDDAKNVVVEVRAGTGGDEASIFAGDLFRMYSKY 137 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 + ++ + + DG G K + G + YG LK E GVHR+ R+ ++ R HT Sbjct: 138 CSDKGWRVDVVSQSDGTSGGFKEVIFEVSGEDVYGTLKFEAGVHRVQRVPQTETQGRVHT 197 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S +++ V P ++ + E+ ++ RI+ ++G GGQ VNTT SA+++ H PTG++V CQ Sbjct: 198 SAATVMVLPEAEE-FDYELDMTEVRIERTTSTGPGGQSVNTTYSAIKLHHEPTGMIVSCQ 256 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321 ++S HKN +A +LR++LYE EL KR+ A E K+ + G +IR+Y P Sbjct: 257 DQKSSHKNLEKALKVLRSRLYERELAKRQ--AADSEKRKSMVSSGDRSAKIRTYNY-PQG 313 Query: 322 MVKDLRTNIEKTSPSDVLDGDL 343 V D R + +++++GD+ Sbjct: 314 RVTDHRIGLTLYDLTNIINGDI 335 >gi|148238741|ref|YP_001224128.1| peptide chain release factor 1 [Synechococcus sp. WH 7803] gi|166223613|sp|A5GIR6|RF1_SYNPW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|147847280|emb|CAK22831.1| Peptide chain release factor 1 [Synechococcus sp. WH 7803] Length = 365 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 92/244 (37%), Positives = 135/244 (55%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D LE+ AGAGG E+ WA L RMY R++ +R + + + + + G K L + Sbjct: 112 DERSVMLEIRAGAGGDEACLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG + + LK E GVHR+ R+ +S R HTS +++ V P D +E++I +D I T Sbjct: 172 KGESVFSELKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-PVEVQIEPADLEIST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H P+G+ V C QERSQ +N+ +A +LRAKLYE +L + Sbjct: 231 ARSGGAGGQNVNKVETAVDLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQLAE- 289 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348 AN ESS G RS ++ Y KD R + S VL G ++D + Sbjct: 290 ---ANARESSARRAQVGTGDRSEKIRTYN-AKDNRVTDHRLGRNFSLDPVLQGQMEDVIG 345 Query: 349 ATLA 352 A +A Sbjct: 346 ACIA 349 >gi|124026680|ref|YP_001015795.1| peptide chain release factor 1 [Prochlorococcus marinus str. NATL1A] gi|229470356|sp|A2C4X1|RF1_PROM1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|123961748|gb|ABM76531.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. NATL1A] Length = 365 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 116/357 (32%), Positives = 193/357 (54%), Gaps = 26/357 (7%) Query: 14 FDWDNAVQRL-----SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAIS-FIK-EIQD 64 D ++RL SF N + + DP + + + + + RER L+ ++ ++K +I + Sbjct: 1 MDSSTLIKRLETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIE 60 Query: 65 RLC-DNLILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEV 121 + C + L++ + ++ + +L +E NL+ K E+ K +LL + D LE+ Sbjct: 61 KECLEAKGLVKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG E+ WA L RMY R+ +K + + + + + G + + +KG + Y L Sbjct: 121 RAGAGGNEACLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS +++ V P D +E++I +D I T R+ GAGGQ Sbjct: 181 KFEAGVHRVQRVPSTESQGRVHTSTATVAVMPEAD-PVEVKIESTDLEISTARSGGAGGQ 239 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++A+ + H P+G+ V C QERSQ +N+ +A +LRAKL ELE+ + AN E Sbjct: 240 NVNKVETAIDLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELEIAE----ANAKER 295 Query: 302 SK--TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352 S +++G G RS ++ Y KD RT + + VL G L+D + A +A Sbjct: 296 SARLSQVGTGD--RSEKIRTYNY-KDNRTTDHRLGVNFPLEQVLSGQLEDVIGACIA 349 >gi|317968845|ref|ZP_07970235.1| peptide chain release factor 1 [Synechococcus sp. CB0205] Length = 367 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 114/352 (32%), Positives = 177/352 (50%), Gaps = 37/352 (10%) Query: 22 RLSF--LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD--------NLI 71 R +F L + DP + N + + + RER L+ + D+LC + Sbjct: 14 RTTFETLERQLADPDVAANPAQLEPIARERARLEPLVLGY----DQLCQWRKQEQEARQL 69 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTES 130 L E +++ ++ QE L +E + +LL + D LE+ AGAGG E+ Sbjct: 70 LKESRGDQEMEALAQEELSGLATQIAAMEEQLTLALLPRDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+A+ +K + + + E G K L I+G + + LK E GVHR+ Sbjct: 130 AIWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIQGDSVFSQLKYEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I +D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMPEAD-PVEVQIDPTDLEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL------QKREEIANIGESSKT 304 + H PTG+ V C QERSQ +N+ +A +LRAKLYE EL ++ +A +G ++ Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELAEANAKERSARLAQVGSGDRS 308 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 E +IR+Y KD RT + S VL G L + + A ++ Sbjct: 309 E-----KIRTY------NYKDNRTTDHRLGRNFSLEPVLQGQLAELIGACVS 349 >gi|87309295|ref|ZP_01091431.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645] gi|87287934|gb|EAQ79832.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645] Length = 358 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 108/320 (33%), Positives = 171/320 (53%), Gaps = 16/320 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R FL + DP + N + + RE L + + ++ + D + + LE Sbjct: 9 LSRFEFLEKQMSDPDVMGNSHQMATIAREHGSLAKLATKYRTFKNTI-DEMGEAKELLES 67 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-----YLEVHAGAGGTESQDWA 134 DD + + + ++ +K + E K ++ LL +DA LE+ GAGG E+ +A Sbjct: 68 DDEEMCELAAADIVTLKAKRE-KLWQELLDMTIGGDDANRTRIVLEIRGGAGGDEAALFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L MY R+AE +K+K E +E + E G K + ++G Y L+ E G HR+ R+ Sbjct: 127 RDLYEMYKRYAETKKWKYEVMEANPTELGGFKEVIISVEGEGVYRELQYESGGHRVQRVP 186 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA-SGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P +D +E E++ D ++ Y A SG GGQHVN T SAVR+ Sbjct: 187 ETEAKGRVHTSAATVAVMPEPED-VEFELNPEDYEVERYAASSGPGGQHVNKTASAVRLI 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H GV+VQC +ERSQHKN A+A +L+ KLY E+++ EE + K+ +G G + Sbjct: 246 H-KDGVIVQCCEERSQHKNLAKALRLLKTKLY--EVKRAEEEKQRSDHRKSLVGSGDRSQ 302 Query: 311 QIRSYVLQPYQMVKDLRTNI 330 +IR+Y P V D R N+ Sbjct: 303 RIRTYNF-PENRVTDHRINL 321 >gi|307104974|gb|EFN53225.1| hypothetical protein CHLNCDRAFT_25946 [Chlorella variabilis] Length = 360 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/338 (30%), Positives = 184/338 (54%), Gaps = 20/338 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLILLELALEEDDC 82 L + DP + N + L+R + +A+ + K+++ +L D LL+ + E D Sbjct: 20 LQERMADPEVSGNNTGYQKLVRAVSDIQDAVDGYTAYKDLERQLADAKELLKES--EGDP 77 Query: 83 SILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + + ++ ++ +E + ++ L D + LEV AG GG E+ WA L+ Sbjct: 78 EMAELAREEMEALQAAIEQQGERLKYLLLPKDPLDEKNIMLEVRAGTGGEEAALWAADLI 137 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY ++A+ + +K + E G K L I G LK E GVHR+ R+ ++ Sbjct: 138 RMYQKYADTQGWKVSLMSESSAEAGGYKECVLQITGDR---QLKYESGVHRVQRVPATET 194 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + R HTS +++ + P VDD + ++I D + T RA GAGGQ+VN ++AV + H PTG Sbjct: 195 SGRVHTSTATVAIMPEVDD-VAVKIDPKDIALTTARAGGAGGQNVNKVETAVDLMHKPTG 253 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 + + CQ+ER+Q +N+ +A +LRAKL+ELEL+K+ + I K+++G G +I++Y Sbjct: 254 IRIFCQEERTQGRNRERAMALLRAKLFELELEKQR--SEISARRKSQVGTGSRSEKIKTY 311 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + +M D R+ I + V++G LD+ ++ + + Sbjct: 312 NYKDTRM-SDHRSKI-NYDLNKVMEGALDECIQTMVML 347 >gi|163756580|ref|ZP_02163692.1| peptide chain release factor 1 [Kordia algicida OT-1] gi|161323474|gb|EDP94811.1| peptide chain release factor 1 [Kordia algicida OT-1] Length = 357 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 84/234 (35%), Positives = 136/234 (58%), Gaps = 7/234 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + +EV AG GG E+ +A L RMYT++ E R + ++ +G G K + Sbjct: 106 DSKNVVVEVRAGTGGDEASIFAGDLHRMYTKYCEGRGWNVSVVDYSEGTSGGFKEIIFEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG +K E GVHR+ R+ ++ R HTS +++ V P ++ ++E+ +D RI+ Sbjct: 166 SGEDVYGTMKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVELDMNDVRIER 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 ++G GGQ VNTT SA+R+ H P+G+VV CQ ++S HKN +A +LR++LYE EL+K+ Sbjct: 225 TTSTGPGGQSVNTTYSAIRLHHGPSGLVVSCQDQKSSHKNLEKALKVLRSRLYEKELEKK 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +A K+ + G +IR+Y P V D R + S++++GD+ Sbjct: 285 --LAADSARRKSMVSSGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLSNIMNGDI 335 >gi|306833419|ref|ZP_07466546.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338] gi|304424189|gb|EFM27328.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338] Length = 359 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 147/260 (56%), Gaps = 14/260 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A+ LL+MY ++AE + +K + +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFASDLLQMYQKYAENQGWKFDVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK +++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 ASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E EI D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ IG G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQNEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKATL 351 +L G LD+ + A + Sbjct: 327 LQKLDTILSGKLDEVIDALI 346 >gi|163840178|ref|YP_001624583.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC 33209] gi|189039986|sp|A9WNB3|RF1_RENSM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|162953654|gb|ABY23169.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC 33209] Length = 360 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/247 (39%), Positives = 144/247 (58%), Gaps = 10/247 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LEV AG GG ES +A L+RMY+R+AE + +K E + + + G K + + Sbjct: 100 DGRDVILEVKAGEGGDESALFAADLVRMYSRYAESKGWKIEVISATESDLGGYKDIQIAV 159 Query: 173 KG------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG + LK E GVHR+ R+ +S R HTS + + V+P VD+ E+EIS++ Sbjct: 160 KGRSNDPAEGVFAALKFEGGVHRVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEVEISQN 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-- 284 D +ID YR+SG GGQ VNTTDSAVRITH PTG+VV Q E+SQ +N+ +LRA++ Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHFPTGIVVAMQNEKSQLQNREAGMRVLRARILA 279 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++ EL E A + +S + +IR+Y P + D RT + + V++GDL Sbjct: 280 HQQELIDAENSA-VRKSQIRTMDRSERIRTYNF-PENRIADHRTGYKSYNLDAVMNGDLG 337 Query: 345 DFMKATL 351 +++ + Sbjct: 338 PVIQSAI 344 >gi|313206514|ref|YP_004045691.1| bacterial peptide chain release factor 1 (brf-1) [Riemerella anatipestifer DSM 15868] gi|312445830|gb|ADQ82185.1| bacterial peptide chain release factor 1 (bRF-1) [Riemerella anatipestifer DSM 15868] gi|325336038|gb|ADZ12312.1| Protein chain release factor A [Riemerella anatipestifer RA-GD] Length = 362 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 26/306 (8%) Query: 55 AISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SG 110 A++ IKE + + D + L++LA E QE D + I+ E++Y LL Sbjct: 58 ALNAIKEADEIIADGSDKDLVDLAKMEK-----QEAIDRIPSIEEELKY-----LLIPKD 107 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA--GIKSA 168 AD + +E+ AG GG ES + + RMYT + + + +K E + D EA G K Sbjct: 108 PADDKNVMVELRAGTGGDESAIFVEDVYRMYTMYFKSKGWKHE---VTDSNEASKGYKEL 164 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + ++G YG +K E GVHR+ R+ +S R HTS ++ V P ++ +++EI+ +D Sbjct: 165 IMRVEGDGVYGIMKFESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDVEINPADI 223 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 + T R+ GAGGQ+VN ++ V++TH PTG+VV CQQ RSQ N+ A MLR KLY++E Sbjct: 224 EMQTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIE 283 Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 LQK + +I KT + G +IR+Y P V D R N + + ++GD+ + Sbjct: 284 LQKVQ--GDIAAQRKTMVSTGDRSAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQE 340 Query: 346 FMKATL 351 + A + Sbjct: 341 MLDALI 346 >gi|315023545|gb|EFT36549.1| Peptide chain release factor 1 [Riemerella anatipestifer RA-YM] Length = 362 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 26/306 (8%) Query: 55 AISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SG 110 A++ IKE + + D + L++LA E QE D + I+ E++Y LL Sbjct: 58 ALNAIKEADEIIADGSDKDLVDLAKMEK-----QEAIDRIPSIEEELKY-----LLIPKD 107 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA--GIKSA 168 AD + +E+ AG GG ES + + RMYT + + + +K E + D EA G K Sbjct: 108 PADDKNVMVELRAGTGGDESAIFVEDVYRMYTMYFKSKGWKHE---VTDSNEASKGYKEL 164 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + ++G YG +K E GVHR+ R+ +S R HTS ++ V P ++ +++EI+ +D Sbjct: 165 IMRVEGDGVYGIMKFESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDVEINPADI 223 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 + T R+ GAGGQ+VN ++ V++TH PTG+VV CQQ RSQ N+ A MLR KLY++E Sbjct: 224 EMQTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIE 283 Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 LQK + +I KT + G +IR+Y P V D R N + + ++GD+ + Sbjct: 284 LQKVQ--GDIAAQRKTMVSTGDRSAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQE 340 Query: 346 FMKATL 351 + A + Sbjct: 341 MLDALI 346 >gi|255716670|ref|XP_002554616.1| KLTH0F09482p [Lachancea thermotolerans] gi|238935999|emb|CAR24179.1| KLTH0F09482p [Lachancea thermotolerans] Length = 400 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 109/312 (34%), Positives = 162/312 (51%), Gaps = 35/312 (11%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 I +K++QD + +DD S+ E + I+ ++E K SLL G+ Sbjct: 85 IELLKDLQDMM------------KDDPSLRDEAQQEMAEIRPQLE-KTSSSLL-GQLLPP 130 Query: 116 DAY------LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSA 168 + LE+ G GG E+ +A LL MY +A +++K + E +GI A Sbjct: 131 HPFADRPCILEIRPGVGGIEAMIFAQDLLGMYINYAHNKRWKYHIISQSANESGSGIVDA 190 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEI 221 L I P +Y L+ E GVHR+ RI ++ R HTS +++ V P + + S E Sbjct: 191 ILSIDEPGSYDKLRFEAGVHRVQRIPATETKGRTHTSTAAVVVLPQMAEDNEKEAESYER 250 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 + RID RA G GGQHVNTTDSAVR+TH P+G+V+ Q ERSQHKNKA+A+ +LR Sbjct: 251 TFKPDEIRIDVMRARGKGGQHVNTTDSAVRLTHYPSGIVINMQNERSQHKNKAKAFAILR 310 Query: 282 AKLYELELQKREE---IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 A+L E+E + +EE A G+ S T+ ++R+Y P + D R + Sbjct: 311 ARLAEIEQKAKEEKARAARKGQVSTTD--RSDKVRTYNF-PQNRITDHRCGFNLHDMEGI 367 Query: 339 LDGD-LDDFMKA 349 + G+ LDD + A Sbjct: 368 MAGERLDDVIDA 379 >gi|291393031|ref|XP_002713016.1| PREDICTED: mitochondrial translational release factor 1 [Oryctolagus cuniculus] Length = 446 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 109/302 (36%), Positives = 165/302 (54%), Gaps = 30/302 (9%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 ++Q ++EA+ + E + + +++ E Q L LALEE ++T D Sbjct: 120 IYQEILEAQQAIEELESMCKSLNTQDEKQ--------LQALALEE------RQTIDE--- 162 Query: 95 IKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKF 150 KL + Y + F++L+ E D ND LEV +G GG Q + + MY ++ + + Sbjct: 163 -KLNMLYSELFQNLVPKEKYDKNDVILEVISGRTTGGDICQQFTREIFDMYQNYSCYKHW 221 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFS 207 K E L E G+ A I G + Y LK E G+HR+ RI +SR HT Sbjct: 222 KFELLNYTPAEYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTM 281 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S+ V P D+ +++++ D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQER Sbjct: 282 SVIVLPQPDE-VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQER 340 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KNK A ++LRA+LY+ ++K + S ++ G + +S ++ Y +D Sbjct: 341 SQIKNKEIALHVLRARLYQQIIEK----DKCQQQSARKLQVGTRAQSERIRTYNFTQDRV 396 Query: 328 TN 329 T+ Sbjct: 397 TD 398 >gi|218245097|ref|YP_002370468.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801] gi|226739099|sp|B7K205|RF1_CYAP8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|218165575|gb|ACK64312.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801] Length = 370 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/243 (36%), Positives = 146/243 (60%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMY+R+AE +K+ + + + G K A L I Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ ++ R HTS +++ + P VDD +E++I D I T Sbjct: 172 QGDRVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDD-VEVQIDAKDIEITT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + + P G+ + C +ERSQ +N+ +A +LRAKLY+L+L R Sbjct: 231 ARSGGAGGQNVNKVETAVDLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYDLKL--R 288 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E+ + K+++G G +IR+Y + + V D R + S + L+GD+++ +++ Sbjct: 289 EQQDAVSSMRKSQVGTGARSEKIRTYNYKDNR-VTDHRLG-QNFSLAGTLEGDIEEIIQS 346 Query: 350 TLA 352 ++ Sbjct: 347 CIS 349 >gi|332241803|ref|XP_003270069.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 1 [Nomascus leucogenys] gi|332241805|ref|XP_003270070.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2 [Nomascus leucogenys] Length = 445 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/256 (40%), Positives = 149/256 (58%), Gaps = 27/256 (10%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE ++T D K+ + Y + F+SL+ E D ND LEV AG GG Sbjct: 148 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G + Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ ++++++ D RIDT+RA GAGGQHVN Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLNPKDLRIDTFRAKGAGGQHVN 316 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302 TTDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ +E +R++ + + Sbjct: 317 TTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDRRQQQS----AR 372 Query: 303 KTEIGWGRQ---IRSY 315 K ++G Q IR+Y Sbjct: 373 KLQVGTRAQSERIRTY 388 >gi|325954306|ref|YP_004237966.1| peptide chain release factor 1 [Weeksella virosa DSM 16922] gi|323436924|gb|ADX67388.1| Peptide chain release factor 1 [Weeksella virosa DSM 16922] Length = 362 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 150/267 (56%), Gaps = 9/267 (3%) Query: 87 ETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L +I KLE E K F + D + +E+ AG GG E+ + + RMY + Sbjct: 85 EKDEALHKIPKLEEEIK-FMLIPKDPEDDKNVIVELRAGTGGDEAAIFVEDIYRMYAMYF 143 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 +++ ++ E L + G K + ++G YG +K E GVHR+ R+ +S R HTS Sbjct: 144 KQKGWQHEVLNTSEASGKGFKEMVISVEGNAVYGTMKYESGVHRVQRVPETESQGRVHTS 203 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ V P ++ +++EI+ +D T R+SGAGGQ+VN ++ V++TH P+G+V+ CQ+ Sbjct: 204 AITVAVLPEAEE-VDVEINPADLEYQTARSSGAGGQNVNKVETKVQLTHKPSGIVIVCQE 262 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 RSQHKN+ +A +LR KLYE+E +K+ A E K+ + G +IR+Y P Sbjct: 263 ARSQHKNREKALQLLRTKLYEIEFEKKH--AERSEQRKSLVSTGDRSAKIRTYNY-PQGR 319 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKA 349 V D R N + + ++GD+ + + A Sbjct: 320 VTDHRINKSIYNLDNFMNGDIQEMIDA 346 >gi|145352937|ref|XP_001420790.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581025|gb|ABO99083.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 343 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 96/272 (35%), Positives = 153/272 (56%), Gaps = 14/272 (5%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A+ +++ L SD L VE L D + LE+ AG GG E+ WA Sbjct: 57 VAMAKEEIDALTTESDAL------VETMTLALLPKDPLDEKNIMLEIRAGTGGDEAGIWA 110 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE+ ++T + + + G K + IKG + Y LK E GVHR+ R+ Sbjct: 111 GDLYRMYMRFAEREGWQTSVVTNNPADAGGYKEIVVEIKGDDVYSSLKWEAGVHRVQRVP 170 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R TS +++ V P VD+ +E++I ++D I T R+ GAGGQ+VN ++A+ + H Sbjct: 171 ATETQGRIQTSTATVAVMPEVDE-VEVKIDDNDLDISTARSGGAGGQNVNKVETAIDLMH 229 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+ V C +ER+Q KN+ +A +LRAKL+EL+L+ E+ + + K+++G G + Sbjct: 230 KPTGIRVFCTEERTQMKNRIRAMQILRAKLFELQLE--EQRKAVSDKRKSQVGSGSRSEK 287 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 IR+Y + + V D R S + LDGD+ Sbjct: 288 IRTYNWKDSR-VSDHRIGA-NFSLQNFLDGDI 317 >gi|89890298|ref|ZP_01201808.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7] gi|89517213|gb|EAS19870.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7] Length = 358 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 138/234 (58%), Gaps = 7/234 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A +E+ AGAGG E+ +A L RMY ++ + + T ++ G G K L + Sbjct: 106 DAKNAVMEIRAGAGGDEASIFAGDLFRMYEKYCSSKGWSTSVVDTSHGTSGGYKEIILEV 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ ++ R HTS +++ V P ++ ++E+ ++ RI+ Sbjct: 166 NGEDVYGTLKFEAGVHRVQRVPQTETQGRVHTSAATVMVLPEAEE-FDVELDMTEVRIER 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 ++G GGQ VNTT SA+++ H PTG++V CQ ++S HKN +A +LR++LYE+EL K+ Sbjct: 225 TTSTGPGGQSVNTTYSAIKLHHEPTGMIVSCQDQKSSHKNLEKALKVLRSRLYEMELAKK 284 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 E + E K+ + G +IR+Y + V D R N+ ++++GD+ Sbjct: 285 MEADS--EKRKSMVSSGDRSAKIRTYNYSQGR-VTDHRINLTLYDLDNIINGDI 335 >gi|288905236|ref|YP_003430458.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34] gi|306831307|ref|ZP_07464467.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978212|ref|YP_004287928.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731962|emb|CBI13527.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34] gi|304426543|gb|EFM29655.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178140|emb|CBZ48184.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 359 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 93/260 (35%), Positives = 146/260 (56%), Gaps = 14/260 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL+MY ++AE + +K + +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLQMYQKYAESQGWKFDVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK +++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 ASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E EI D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ IG G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQNEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKATL 351 +L G LD+ + A + Sbjct: 327 LQKLDTILSGKLDEVIDALI 346 >gi|218440653|ref|YP_002378982.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424] gi|226739098|sp|B7KI17|RF1_CYAP7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|218173381|gb|ACK72114.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424] Length = 370 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 128/206 (62%), Gaps = 6/206 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMY+R+AE + + + + + G K A L I Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQNWVVKLVSESLADMGGFKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG Y LK E GVHR+ R+ ++ R HTS +++ + P VD+ +E++I D + T Sbjct: 172 KGDQVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDE-VEVQIDPKDIEVST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++L+++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQ 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSY 315 +E + ++++G G +IR+Y Sbjct: 291 QEA--VSSMRRSQVGTGSRSEKIRTY 314 >gi|126658019|ref|ZP_01729171.1| peptide chain release factor 1 [Cyanothece sp. CCY0110] gi|126620657|gb|EAZ91374.1| peptide chain release factor 1 [Cyanothece sp. CCY0110] Length = 369 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 86/243 (35%), Positives = 146/243 (60%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMY+R+AE +K+ + + + G K A L I Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E GVHR+ R+ ++ R HTS +++ + P VD+ +EI+I D + T Sbjct: 172 TGDQVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDE-VEIQIDPKDIEMTT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +N+ +A +LRAKLYE +L+++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQ 290 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E + ++++G G +IR+Y + + V D R + + + L+G++D+ ++ Sbjct: 291 QEA--VSSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-QNFALAGALEGNIDNIIET 346 Query: 350 TLA 352 ++ Sbjct: 347 CIS 349 >gi|109120568|ref|XP_001090893.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3 [Macaca mulatta] gi|109120570|ref|XP_001090782.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2 [Macaca mulatta] Length = 445 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 102/261 (39%), Positives = 147/261 (56%), Gaps = 22/261 (8%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE ++T D K+ + Y + F+SLL E D ND LEV +G GG Sbjct: 148 LQELALEE------RQTIDQ----KINMLYNELFQSLLPKEKYDKNDVILEVTSGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G + Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 316 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K + S Sbjct: 317 TTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK----DKCQQRSAR 372 Query: 305 EIGWGRQIRSYVLQPYQMVKD 325 ++ G + +S ++ Y +D Sbjct: 373 KLQVGTRAQSERIRTYNFTQD 393 >gi|14042548|dbj|BAB55295.1| unnamed protein product [Homo sapiens] Length = 238 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/222 (42%), Positives = 129/222 (58%), Gaps = 9/222 (4%) Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + + + MY ++A +++ E LE E G++ A+ I G AY +K E GVHR+ R Sbjct: 3 FTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRVQR 62 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + + R HTS ++ + P + I + I+ D RIDT RASGAGGQHVNTTDSAVRI Sbjct: 63 VPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRI 121 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR- 310 H+PTGVV +CQQERSQ KNK A LRAKLY + L+ EEI + K +IG GR Sbjct: 122 VHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE--EEINKRQNARKIQIGSKGRS 179 Query: 311 -QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349 +IR+Y P V D R N + GD LD+ +++ Sbjct: 180 EKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQS 220 >gi|291297042|ref|YP_003508440.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279] gi|290472001|gb|ADD29420.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279] Length = 358 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 86/243 (35%), Positives = 136/243 (55%), Gaps = 13/243 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A +E+ AG GG E+ +A L M +A++ ++ E L+ + G+ + Sbjct: 103 DEKNAIVEIRAGTGGEEAALFAAELRDMIMEYAKQGGYRVEVLDTSLTDLGGVSKVVFEV 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 GP AYG+LK E GVHR+ R+ ++ R HTS +++ V P ++ ++++I +D I Sbjct: 163 SGPGAYGYLKYEAGVHRVQRVPATETQGRIHTSTATVAVMPEAEE-VDVQIDPADLEITV 221 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---- 288 RASG GGQ VNTTDSAV++ H PTG++V C + RSQ KNK +A ++LR++L E++ Sbjct: 222 SRASGPGGQGVNTTDSAVQVLHKPTGMIVSCMESRSQIKNKEKALSILRSRLLEMKRAEE 281 Query: 289 --LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ + +A IG ++E +IR+Y P V D R VL GDL Sbjct: 282 AARRREDRLAQIGAGERSE-----KIRTYNF-PQSRVTDHRIGFTTHDLEGVLAGDLSKL 335 Query: 347 MKA 349 +A Sbjct: 336 HEA 338 >gi|172038958|ref|YP_001805459.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142] gi|171700412|gb|ACB53393.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142] Length = 375 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 86/243 (35%), Positives = 146/243 (60%), Gaps = 8/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA L+RMY+R+AE +K+ + + + G K A L I Sbjct: 118 DDKNIMLEIRAGTGGDEASIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEI 177 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E GVHR+ R+ ++ R HTS +++ + P VD+ +EI+I D + T Sbjct: 178 TGDQVYSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDE-VEIQIDPKDIEMTT 236 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +N+ +A +LRAKLYE +L+++ Sbjct: 237 ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQ 296 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +E + ++++G G +IR+Y + + V D R + + + L+G++D+ ++ Sbjct: 297 QEA--VSSMRRSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-QNFALAGALEGNIDNIIET 352 Query: 350 TLA 352 ++ Sbjct: 353 CIS 355 >gi|320546676|ref|ZP_08040988.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812] gi|320448731|gb|EFW89462.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812] Length = 359 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 145/258 (56%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL+MY ++AE + +K + +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLQMYQKYAESQGWKFDVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK +++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 ASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E EI D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKVIRARVADHFAQIAQNEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G LD+ + A Sbjct: 327 LQKLDSILSGKLDEIIDA 344 >gi|194040714|ref|XP_001926694.1| PREDICTED: peptide chain release factor 1, mitochondrial-like isoform 1 [Sus scrofa] gi|311266318|ref|XP_003131053.1| PREDICTED: peptide chain release factor 1, mitochondrial-like isoform 2 [Sus scrofa] Length = 446 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 103/254 (40%), Positives = 142/254 (55%), Gaps = 23/254 (9%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE +I Q K+ + Y + F+SL+ E D ND LEV +G GG Sbjct: 149 LQELALEEKR-TIAQ---------KINMLYHELFQSLVPKEKYDKNDVILEVTSGRTTGG 198 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + + E L + G+ A I G N Y LK E G+ Sbjct: 199 DICQQFTREIFDMYQNYSSYKHWTFELLNYTPADYGGLHHAAARISGANVYKHLKYEGGI 258 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKVDPKDLRIDTFRAKGAGGQHVN 317 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+ H+PTG+VV+CQQERSQ KNK A +LRA+LY+ ++K E + K Sbjct: 318 TTDSAVRLVHVPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEK--EKCQQQSARKL 375 Query: 305 EIGWGRQ---IRSY 315 ++G Q IR+Y Sbjct: 376 QVGTRAQSERIRTY 389 >gi|308810022|ref|XP_003082320.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri] gi|116060788|emb|CAL57266.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri] Length = 1699 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 12/244 (4%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A+ ++ L E SD L VE L D + LE+ AG GG E+ WA Sbjct: 129 VAMAREEIDALTEESDKL------VEDMTLALLPKDPLDEKNIMLEIRAGTGGDEAGIWA 182 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE+ ++ + + + G K IKG + Y LK E GVHR+ R+ Sbjct: 183 GDLYRMYMRFAEREGWQATVVTSNTADAGGFKEIVAEIKGADVYSNLKWEAGVHRVQRVP 242 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R TS +++ + P VD+ +E++I E D I T R+ GAGGQ+VN ++A+ + H Sbjct: 243 ATETQGRIQTSTATVAIMPEVDE-VEVQIDEKDLDISTARSGGAGGQNVNKVETAIDLMH 301 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+ V C +ER+Q KN+ +A +LRAKL+E++L+++++ I + K+++G G + Sbjct: 302 KPTGIRVFCTEERTQLKNRIRAMQILRAKLFEIQLEEQQKA--ISDKRKSQVGSGSRSEK 359 Query: 312 IRSY 315 IR+Y Sbjct: 360 IRTY 363 >gi|167517235|ref|XP_001742958.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778057|gb|EDQ91672.1| predicted protein [Monosiga brevicollis MX1] Length = 416 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 117/199 (58%), Gaps = 26/199 (13%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD A +E+ AG GG E+ +A+ L MY A+++++ + L+ ++ G++ A+L Sbjct: 124 ADEASAVVELRAGTGGREAALFAHDLKLMYQGLAQQQRWSFKVLDEQATDDGGLREASLS 183 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G +G LK E GVHR+ RI ++ R HTS +++ V P D +E+E+ + D ++ Sbjct: 184 ISGSGVFGMLKFESGVHRVQRIPTTETAGRIHTSTATVAVLPEPTD-VEVEVLDKDIHVE 242 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK-------------------- 271 TYRA GAGGQHVNTTDSAVR+TH+PTG VV CQ ERSQHK Sbjct: 243 TYRAGGAGGQHVNTTDSAVRLTHLPTGTVVACQTERSQHKLEHIVSTRVAIDQCVLFNRV 302 Query: 272 -----NKAQAWNMLRAKLY 285 NKA A +L+A+++ Sbjct: 303 HHLVQNKAAAMKVLKARIF 321 >gi|145485050|ref|XP_001428534.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124395620|emb|CAK61136.1| unnamed protein product [Paramecium tetraurelia] Length = 390 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 117/365 (32%), Positives = 181/365 (49%), Gaps = 39/365 (10%) Query: 7 LNCLGGLFDWDNAV-----------QRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHL 52 NC F + N + QRL LNT+ E D + ++ E K R L Sbjct: 7 FNCHLNRFQFSNTLNNISKTLYLINQRLGELNTEYETYQDQTIKGDMNEIKR--RRMNEL 64 Query: 53 DNAISFIKEIQDRLC---DNLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLL 108 I K+IQ + D L+ + D+ S+L E I+ ++EY K+++ Sbjct: 65 QPKIHIYKQIQASVSVIEDAKQLIGMGGSSDEISMLNE------EIQSQIEYLKKYQDDA 118 Query: 109 SGEADSNDAY-------LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + D Y +EV AG GG+E +A ++ M +A + + + I Sbjct: 119 LSQLIEEDEYDHIRQLNVEVRAGVGGSEGSLFAEDIIGMIQNYASLQNWDCRVISIQKDN 178 Query: 162 E--AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 + G K+ L I G N Y LK E GVH+++R+ ++ R H+S +S+ V P V DS Sbjct: 179 QIGKGCKTGILQINGENVYQHLKCESGVHKVIRVPETEAKGRLHSSTASMIVLPKVTDSF 238 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + S+ D R + RASG GGQHVN T+SA RITH+PTG+ V ++RSQ +NK +A+ + Sbjct: 239 HL--SDKDLRYEYMRASGPGGQHVNKTESACRITHVPTGIQVVNMEDRSQERNKQRAYQI 296 Query: 280 LRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 LR KL+ + +Q K+E +A +S T +IR+Y P + + D RTN+ + Sbjct: 297 LRDKLFAIHVQEKQERMAQTRKSQVTGSDRSDKIRTYNF-PQERITDHRTNLTLYGMEKM 355 Query: 339 LDGDL 343 L G+L Sbjct: 356 LSGEL 360 >gi|126337707|ref|XP_001368579.1| PREDICTED: similar to Mitochondrial translational release factor 1 [Monodelphis domestica] Length = 447 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 99/264 (37%), Positives = 146/264 (55%), Gaps = 20/264 (7%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAG--AGGT 128 LLELA EE + + R+ E+ F+SL+ E D +D LEV +G GG Sbjct: 147 LLELAFEEREV-----IDQKINRLCQEL----FQSLVPKEKDDKSDVILEVTSGRTTGGD 197 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 Q + + MY ++ + + E L + G+ A I G + Y ++K E G+H Sbjct: 198 ICQQFTKEIFEMYQSYSCYKGWNFEILNYTTADYGGLHHAAARISGDSVYEYMKYEGGIH 257 Query: 189 RLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 R+ RI +SR HT S+ V P D+ ++I + D RIDT+RA GAGGQHVNT Sbjct: 258 RVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDIRVEPKDLRIDTFRAKGAGGQHVNT 316 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRI HIPTG+VV+CQQ+RSQ +NK A+ +LRAKLY+ ++K + + S + Sbjct: 317 TDSAVRIVHIPTGLVVECQQQRSQIQNKDTAFRLLRAKLYQQTIEKEQS----KKQSVRK 372 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTN 329 + G + +S ++ Y +D T+ Sbjct: 373 LQVGTRAQSERIRTYNFTQDRVTD 396 >gi|293189723|ref|ZP_06608439.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309] gi|292821313|gb|EFF80256.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309] Length = 364 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 133/240 (55%), Gaps = 9/240 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D LE+ AG GG ES +A+ L RMY R+AE + + E G K TL I Sbjct: 105 DAMDVILEIKAGEGGEESALFASDLARMYARYAEAHGWSVTEMSATHTELGGFKDITLAI 164 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 + P+ W LK E GVHR+ R+ +S R HTS + ++V P ++D EI I Sbjct: 165 RAKGTPAPDEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDP 224 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITHIP+G+VV Q E+SQ +NK A +L ++L Sbjct: 225 NDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLA 284 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 K+E A+ S+ + +IR+Y P + D RT + + VL G LD Sbjct: 285 AEARAKKEAEASAQRLSQVRTVDRSERIRTYNF-PENRIADHRTGFKAHNLDAVLSGALD 343 >gi|154509273|ref|ZP_02044915.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC 17982] gi|153798907|gb|EDN81327.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC 17982] Length = 364 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 133/240 (55%), Gaps = 9/240 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D LE+ AG GG ES +A+ L RMY R+AE + + E G K TL I Sbjct: 105 DAMDVILEIKAGEGGEESALFASDLARMYARYAEAHGWSVTEMSATHTELGGFKDITLAI 164 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 + P+ W LK E GVHR+ R+ +S R HTS + ++V P ++D EI I Sbjct: 165 RAKGTPAPDEGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDP 224 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITHIP+G+VV Q E+SQ +NK A +L ++L Sbjct: 225 NDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLA 284 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ++E A+ S+ + +IR+Y P + D RT + + VL G LD Sbjct: 285 AEARARKEAEASAQRLSQVRTVDRSERIRTYNF-PENRIADHRTGFKAHNLDAVLSGALD 343 >gi|289615662|emb|CBI57583.1| unnamed protein product [Sordaria macrospora] Length = 436 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 28/292 (9%) Query: 77 LEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQD 132 L+ DD + Q +D+L K LE + L+ + D +E+H G GGTE + Sbjct: 100 LKSDDAELRQLANDDLDATKKHLETLGTNLSATLTPKHPFADMPCLIELHPGPGGTEGRH 159 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGE 184 +A+ L RMY ++ E + + L + E E I A L + P A+ +GE Sbjct: 160 FADTLFRMYQKYCENKGYTARVLSYQEAEDRTPGLDGEVPISEAVLEVTDPGAFAAFRGE 219 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPV-----VDDSIEIEISESDCRIDT------- 232 G+HR+ RI + R HTS ++WV P D + ESD ID Sbjct: 220 AGMHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYIDPTEVKSEK 279 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVN T+SA+R+THIPTG+ V Q RSQ +N+ +AW +LR+++ L ++R Sbjct: 280 MRASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQSQNREKAWRLLRSRIASLRREQR 339 Query: 293 EEIA-NIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 + A ++ +S S+ ++ G +IR+Y Q D R+ ++ + +VL G Sbjct: 340 DAQAKDLRDSVLSQAQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQG 390 >gi|193786181|dbj|BAG51464.1| unnamed protein product [Homo sapiens] Length = 445 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 104/256 (40%), Positives = 146/256 (57%), Gaps = 27/256 (10%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE ++T D K+ + Y + F+SL+ E D ND LEV AG GG Sbjct: 148 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADNGGLHHAAARISGDGVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 316 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ +E KR++ + + Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQS----AR 372 Query: 303 KTEIGWGRQ---IRSY 315 K ++G Q IR+Y Sbjct: 373 KLQVGTRAQSERIRTY 388 >gi|42521715|ref|NP_967095.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus HD100] gi|61214632|sp|Q6MRK9|RF1_BDEBA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|39574245|emb|CAE77749.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus HD100] Length = 357 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 107/351 (30%), Positives = 181/351 (51%), Gaps = 18/351 (5%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F +AV+ R +N + P + N + + LM+E +L+ + ++ + + + Sbjct: 1 MFSKLDAVESRYEEVNMALQRPDIASNQTQYRALMKELGNLEKIVLVYRDYRKKTENLKA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS------GEADSNDAYLEVHAGA 125 EL E D + + + ++ +LE E E L D + LE+ AGA Sbjct: 61 SKELLTAEQDAEMRELIREEVK--ELEAELPDLEQQLKIALIPKDPNDDKNTILEIRAGA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A+ L R Y +A + +K E + +G G K I G + + +K E Sbjct: 119 GGDEAALFADELFRGYVHYASTQGWKVEMISFSEGNAGGAKEIIASITGDSVFSKMKYES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS ++ V P V+ S EI+I SD RI+T R+ G+GGQ VN Sbjct: 179 GVHRVQRVPKTEAAGRIHTSTVTVAVIPEVEVS-EIKIPMSDVRIETMRSQGSGGQSVNR 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKT 304 T+SAVR+ H+PTG+ V+CQ+ +SQ N+ +A+ +L AKL ++E +K R+E +++ Sbjct: 238 TESAVRVVHLPTGIDVKCQEGKSQSTNRERAFQILYAKLQQIEDEKARKEASDV---RLE 294 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IG G +IR+Y P + D R + V+ G + + +A Sbjct: 295 QIGTGDRSERIRTYNF-PQTRITDHRIGLTIHQLDQVMSGSFELLIDPLIA 344 >gi|242069313|ref|XP_002449933.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor] gi|241935776|gb|EES08921.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor] Length = 412 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 169/300 (56%), Gaps = 15/300 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE---EDDC 82 ++ + DP + + E + L + LD ++ ++ +D C+ + ALE EDD Sbjct: 64 MSVRLADPDIVSDPSEYQKLAQSVSELDQVVTTYRQFKD--CERQLEETKALEKENEDDP 121 Query: 83 SILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + + L+ + ++ E + L S DS + LEV AGAGG E+ WA L+ Sbjct: 122 DMSEMITSELEALSNQLAELEEKLKLLLLPSDPLDSRNILLEVRAGAGGDEAGIWAGDLV 181 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY ++ E+ +K + + + + G K+ + +KG Y LK E GVHR+ R+ ++ Sbjct: 182 RMYQKYCERNNWKFKPVSCSEADMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTET 241 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS +++ + P D+ +++ I D + T R+ GAGGQ+VN ++AV + H PTG Sbjct: 242 MGRVHTSTATVAIMPEADE-VDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTG 300 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 + + C +ERSQ +NK +A+ +LRAKLYE++L++++E +I K ++G G +IR+Y Sbjct: 301 IRIFCTEERSQLQNKERAFQLLRAKLYEIKLREQQE--SIRNQRKMQVGTGARSEKIRTY 358 >gi|260584605|ref|ZP_05852351.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633] gi|260157628|gb|EEW92698.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633] Length = 359 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 92/242 (38%), Positives = 138/242 (57%), Gaps = 7/242 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A LL MY ++AE + ++ E ++ + G K L+I Sbjct: 106 DGKNIIMEIRGAAGGDEAALFAGDLLSMYQKYAESQGWRVEVMDANVTGIGGYKEVILMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N + LK E G HR+ R+ +S R HTS +++ V P + +EIE+ + D R+D Sbjct: 166 TGDNVFSKLKYESGAHRVQRVPSTESQGRVHTSTATVVVMPEAE-EVEIELEDKDIRVDI 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 Y ASGAGGQHVN T SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ Q Sbjct: 225 YHASGAGGQHVNKTASAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDKISQ-- 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 E + + K+ +G G +IR+Y P V D R + VL G +D+ + A Sbjct: 283 EAQSEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDQVLAGKIDEIVDA 341 Query: 350 TL 351 + Sbjct: 342 LI 343 >gi|159904190|ref|YP_001551534.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9211] gi|238687119|sp|A9BCL8|RF1_PROM4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|159889366|gb|ABX09580.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9211] Length = 365 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 135/244 (55%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D LE+ AGAGG E+ WA L RMY R+ +K + + D + G + + + Sbjct: 112 DERSVMLEIRAGAGGDEACIWAGDLARMYERYGQKIGWSVRPISSTDADLGGFRELIISV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG + + LK E GVHR+ R+ +S R HTS +++ V P D +E+++ D I T Sbjct: 172 KGDSVFSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-PVEVQLDPGDLEIST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C QERSQ +N+ +A +LRAKL E+E+ + Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLEMEIAE- 289 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMK 348 AN E S G RS ++ Y KD RT + + +VL+G+LD+ + Sbjct: 290 ---ANAKERSARLAQVGTGDRSEKIRTYNY-KDNRTTDHRLGINFPLENVLEGELDNLIG 345 Query: 349 ATLA 352 A +A Sbjct: 346 ACIA 349 >gi|171779352|ref|ZP_02920316.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281969|gb|EDT47400.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 359 Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 87/244 (35%), Positives = 139/244 (56%), Gaps = 11/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL+MY ++AE + +K + +E GIK +++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVIVMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E EI D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYEIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ +G G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVI 342 Query: 348 KATL 351 A + Sbjct: 343 DALI 346 >gi|332375689|gb|AEE62985.1| unknown [Dendroctonus ponderosae] Length = 400 Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 84/207 (40%), Positives = 126/207 (60%), Gaps = 7/207 (3%) Query: 113 DSNDAY-LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 DS D LEV AG GG E+ +A + MY + + +K + ++ + GI+ ++L Sbjct: 142 DSFDTIILEVQAGVGGQEAMLFAQEMFDMYCSFISLKGWKYDIVDYMGTDLGGIRRGSIL 201 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G AY + K E GVHR+ RI + +SR HTS S+ P ++ I+I I D +I+ Sbjct: 202 VNGSKAYKFFKHEGGVHRVQRIPSTEKSSRIHTSTVSVTALPQPNE-IDIRIDPKDLKIE 260 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T R++GAGGQHVNTTDSAVRI H+PT ++V+CQ +RSQ KN+ A LRA LY+ EL+ Sbjct: 261 TKRSTGAGGQHVNTTDSAVRIVHLPTNIMVECQVDRSQIKNRKLALTKLRALLYQRELE- 319 Query: 292 REEIANIGESSKTEIG---WGRQIRSY 315 E++A + K+++ +IR+Y Sbjct: 320 -EQLAQQESTKKSQVSSNNRNEKIRTY 345 >gi|325283363|ref|YP_004255904.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP] gi|324315172|gb|ADY26287.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP] Length = 377 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 97/245 (39%), Positives = 144/245 (58%), Gaps = 12/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D NDA LE+ +GAGG E+ +A LLRMY+R+AE + E L+ ++ + G + Sbjct: 105 DPNDAVLEIRSGAGGAEAALFAADLLRMYSRYAESAGLRLEVLDSNESDLGGFAKVVAEV 164 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY LK E GVHR+ R+ +S R HTS ++ V P V+ S E+++ S+ RID Sbjct: 165 TGEFAYRTLKWESGVHRVQRVPATESQGRIHTSTVTVAVLPQVEQS-EVQLDLSEVRIDV 223 Query: 233 YRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +R+ GAGGQ VNTTDSAVR T+ P ++V CQ RSQ KN+ +A +L ++L E E Sbjct: 224 FRSQGAGGQSVNTTDSAVRATYRAGTPDEIMVVCQDGRSQIKNREKALMILASRLAERER 283 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE-KTSPSD-VLDGDLD 344 +K++ A+ E+ ++IG G ++R+Y P V D R E K P + V+ G L+ Sbjct: 284 EKQQ--ASEREARSSQIGSGDRSEKVRTYNY-PQNRVTDHRLEGETKNFPLETVIGGRLE 340 Query: 345 DFMKA 349 + + A Sbjct: 341 ELVGA 345 >gi|323446989|gb|EGB02968.1| hypothetical protein AURANDRAFT_12526 [Aureococcus anophagefferens] Length = 305 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 99/267 (37%), Positives = 142/267 (53%), Gaps = 38/267 (14%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +EV A AGG E+ +A LL MY R+A +R+ + L + + G+ A + Sbjct: 40 DAPACLVEVKAAAGGDEASLFAGDLLAMYERFAGRRRHGWDLLSVTKSDCGGVSHAYAEV 99 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--DDSIEIEISESDCRI 230 KGP AYG L+ E GVHR+ R+ D R HTS +S+ V+P D ++ ++ RI Sbjct: 100 KGPGAYGALRFESGVHRVQRVPRNDV--RIHTSTASVVVFPAGAEDRGATVDFDPAELRI 157 Query: 231 DTYRASGAGGQH------------------VNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 DT+RASGAGGQH VNTT+SAVR+TH+PTG VV Q ERSQH+N Sbjct: 158 DTFRASGAGGQHATTRMEIFNPTSMRAYQNVNTTNSAVRVTHLPTGTVVSIQDERSQHRN 217 Query: 273 KAQAWNMLRAKLY--------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 KA+A +L +++ R ++A G+ ++ +IR+Y P+ V Sbjct: 218 KAKALKVLASRVVGAQAAAAAAARSASRAKLAGSGDRAE-------RIRTYN-APHDRVT 269 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R+ S VL GDL D + A+L Sbjct: 270 DHRSGFTANSVDRVLRGDLLDDVVASL 296 >gi|34577120|ref|NP_004285.2| peptide chain release factor 1, mitochondrial precursor [Homo sapiens] gi|114651371|ref|XP_509647.2| PREDICTED: peptide chain release factor 1, mitochondrial isoform 5 [Pan troglodytes] gi|114651373|ref|XP_001150158.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3 [Pan troglodytes] gi|114651375|ref|XP_001150218.1| PREDICTED: mitochondrial translational release factor 1 isoform 4 [Pan troglodytes] gi|62512140|sp|O75570|RF1M_HUMAN RecName: Full=Peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|27503783|gb|AAH42196.1| Mitochondrial translational release factor 1 [Homo sapiens] gi|55958420|emb|CAI16615.1| mitochondrial translational release factor 1 [Homo sapiens] gi|119629053|gb|EAX08648.1| mitochondrial translational release factor 1, isoform CRA_a [Homo sapiens] gi|119629054|gb|EAX08649.1| mitochondrial translational release factor 1, isoform CRA_a [Homo sapiens] gi|119629056|gb|EAX08651.1| mitochondrial translational release factor 1, isoform CRA_a [Homo sapiens] gi|119629058|gb|EAX08653.1| mitochondrial translational release factor 1, isoform CRA_a [Homo sapiens] Length = 445 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 104/256 (40%), Positives = 146/256 (57%), Gaps = 27/256 (10%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE ++T D K+ + Y + F+SL+ E D ND LEV AG GG Sbjct: 148 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 316 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ +E KR++ + + Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQS----AR 372 Query: 303 KTEIGWGRQ---IRSY 315 K ++G Q IR+Y Sbjct: 373 KLQVGTRAQSERIRTY 388 >gi|322434298|ref|YP_004216510.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9] gi|321162025|gb|ADW67730.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9] Length = 358 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 87/244 (35%), Positives = 140/244 (57%), Gaps = 8/244 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL-EIHDGEEAGIKSATLL 171 D + +E+ AG GG E+ + + R+Y R AE+ ++K + L E G G+K T + Sbjct: 105 DDKNIVIELRAGTGGDEAALFVAEMFRVYLRLAEQHRWKVQVLSESFSGIGNGLKDVTAI 164 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +G Y +K E GVHR+ R+ ++ R HTS ++ V P ++ ++I+I D R+D Sbjct: 165 FEGDRVYSQMKYESGVHRVQRVPATETQGRVHTSAITVAVLPEAEE-VDIKIEAKDLRVD 223 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T+ +SG GGQ VNTT SA+RITH+PT VV CQ E+SQ KN+ +A +LR++LYE+ + Sbjct: 224 TFCSSGPGGQSVNTTYSAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVAEET 283 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R + + K ++G G +IR+Y P + D R + + + V++G L + Sbjct: 284 RHQAE--AKIRKDQVGTGDRSEKIRTYNF-PQNRLTDHRIGLTNHNLNMVMEGQLQPTID 340 Query: 349 ATLA 352 A +A Sbjct: 341 ALIA 344 >gi|156055958|ref|XP_001593903.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980] gi|154703115|gb|EDO02854.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980 UF-70] Length = 490 Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 96/261 (36%), Positives = 144/261 (55%), Gaps = 27/261 (10%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGEEAG----IKSATLLI 172 +E+ GAGG E+ +A LLRMY + +++F++ + E DGE AG I L I Sbjct: 210 VEIRPGAGGGEAAIFAADLLRMYRAYCARKRFRSTIIKYETADGEGAGSDSPISEVVLEI 269 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV----------------D 216 + P +Y L+GE GVHR+ R+ + R HTS S+ V P D Sbjct: 270 ETPGSYDSLRGEAGVHRVQRVPATEKQGRTHTSAVSVMVLPSFPTTGQEGQEYWEADLND 329 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + + ++ +D R D RA GAGGQHVNTTDSAVR+TH+PT VV Q+ RSQ +N+ +A Sbjct: 330 PNSDYYVNPADVRTDVMRARGAGGQHVNTTDSAVRLTHVPTNTVVSMQEGRSQLQNRQKA 389 Query: 277 WNMLRAKLYELELQKREE-IANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 W +LR++L + + REE + N+ S ++G G +IR+Y Q V D R+ + Sbjct: 390 WQVLRSRLAAAKREAREEQLINLRRSVIGVAKMGRGDKIRTYNWG-QQRVTDHRSGLSVH 448 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + DV++G D+ K ++K Sbjct: 449 NLDDVMEGG-DELEKVIDSVK 468 >gi|284929590|ref|YP_003422112.1| peptide chain release factor 1 [cyanobacterium UCYN-A] gi|284810034|gb|ADB95731.1| bacterial peptide chain release factor 1 (bRF-1) [cyanobacterium UCYN-A] Length = 367 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/247 (36%), Positives = 146/247 (59%), Gaps = 16/247 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR----KFKTEALEIHDGEEAGIKSA 168 D + LE+ AG GG E+ WA L RMY+R+AE + K E+L + GIK Sbjct: 112 DDKNIMLEIRAGTGGDEASIWAGDLARMYSRYAESQNWVVKLANESL----ADMGGIKET 167 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 L I G + LK E GVHR+ R+ ++ R HTS +++ + P VD+ +E++I D Sbjct: 168 ILEITGDKVFSKLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDE-VEVKIDAKDI 226 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 + T R+ GAGGQ+VN ++AV + H PTG+ + C +ERSQ +N+ +A +LRAKLYE + Sbjct: 227 DMSTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAK 286 Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L++++E I K+++G G +IR+Y + + V D R + + S +L+GD+D Sbjct: 287 LREQQE--EISSMRKSQVGTGSRSEKIRTYNYKDNR-VTDHRLG-QNFALSGILEGDIDI 342 Query: 346 FMKATLA 352 +++ ++ Sbjct: 343 LIESCIS 349 >gi|114609867|ref|XP_001140527.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] gi|114609869|ref|XP_001140612.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] Length = 238 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 126/223 (56%), Gaps = 11/223 (4%) Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + + + MY ++A +++ E LE E G++ A+ I G AY +K E GVHR+ R Sbjct: 3 FTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRVQR 62 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + + R HTS ++ + P + I + I+ D RIDT RASGAGGQHVNTTDSAVRI Sbjct: 63 VPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRI 121 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ----KREEIANIGESSKTEIGW 308 H+PTGVV +CQQERSQ KNK A LRAKLY + L+ KR+ I SK G Sbjct: 122 VHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLEEETNKRQNARKIQIGSK---GR 178 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349 +IR+Y P V D R N + GD LD+ +++ Sbjct: 179 SEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQS 220 >gi|302830560|ref|XP_002946846.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f. nagariensis] gi|300267890|gb|EFJ52072.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f. nagariensis] Length = 361 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 97/267 (36%), Positives = 138/267 (51%), Gaps = 45/267 (16%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLL 171 D A LE+ AGAGG E+ + LL MY ++A R + + +E+ E G+K Sbjct: 59 DGRAALLEMRAGAGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTASEVPGGVKHVVAA 118 Query: 172 IK-------------------------------GPNAYGWLKGEQGVHRLVRISPYDSNS 200 + YG L E GVHR+ R+ ++ Sbjct: 119 VAAGRGAGRRAGGIGDGGEGYDGGEGNSDQDGDAIGVYGTLLPESGVHRVQRVPVTEAQG 178 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V P D+ +++++ + D RI+T RASGAGGQHVN TDSAVRITH+PTG+V Sbjct: 179 RVHTSTVAVVVLPQADE-VDVKLRDEDLRIETMRASGAGGQHVNVTDSAVRITHVPTGLV 237 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKR------EEIANIGESSKTEIGWGRQIRS 314 V CQ ERSQH N+A A +LRA+LY+LE+QKR + A + + ++E +IR+ Sbjct: 238 VSCQNERSQHLNRAAALKILRARLYDLEMQKRAKEMDEQRSALVASADRSE-----RIRT 292 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y P V D R ++ VL G Sbjct: 293 YNF-PQGRVTDHRIHLTLHDLDSVLVG 318 >gi|114651377|ref|XP_001150094.1| PREDICTED: mitochondrial translational release factor 1 isoform 2 [Pan troglodytes] Length = 487 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 104/256 (40%), Positives = 146/256 (57%), Gaps = 27/256 (10%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE ++T D K+ + Y + F+SL+ E D ND LEV AG GG Sbjct: 190 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 239 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 240 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 299 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 300 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 358 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ +E KR++ + + Sbjct: 359 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQS----AR 414 Query: 303 KTEIGWGRQ---IRSY 315 K ++G Q IR+Y Sbjct: 415 KLQVGTRAQSERIRTY 430 >gi|312865182|ref|ZP_07725410.1| peptide chain release factor 1 [Streptococcus downei F0415] gi|311099293|gb|EFQ57509.1| peptide chain release factor 1 [Streptococcus downei F0415] Length = 359 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 21/315 (6%) Query: 41 EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEV 99 E + RE + + AIS +E+ + L E+A EE D I +E + +I L Sbjct: 45 ETVTVYREYKQILQAISDAEEMIKEAGGDPELEEMAKEELKDSKIAKEDYEEKMKILL-- 102 Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 L D + LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 103 -------LPKDPNDDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAESQGWRFEVMEASY 155 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V++ + Sbjct: 156 NGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-V 214 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 E +I D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A + Sbjct: 215 EYDIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKI 274 Query: 280 LRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334 +RA++ + ++ + E+ A K+ IG G +IR+Y P V D R + Sbjct: 275 IRARVADHFAQIAQDEQDAE----RKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQK 329 Query: 335 PSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 330 LDTILSGKMDEVIDA 344 >gi|189191194|ref|XP_001931936.1| peptide chain release factor 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973542|gb|EDU41041.1| peptide chain release factor 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 321 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/242 (39%), Positives = 137/242 (56%), Gaps = 20/242 (8%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE---IHDGEEAGIK--SATLLIK 173 LE+ GAGG+E+ +A L RMY + + F+T L+ I+ EAG+ A + ++ Sbjct: 50 LEIRPGAGGSEAAIFAGDLFRMYMAFCNRNGFRTNLLKYENINGTTEAGVPLSEAIMEVE 109 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI----EIEISESDCR 229 NAYG + E GVHR+ R+ ++ R HTS +S+ V P + ++ + + ESD Sbjct: 110 NENAYGVFRCEAGVHRVQRVPATETKGRTHTSAASVHVLPSLQENSAEEQDFDNPESDYY 169 Query: 230 ID-------TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 ID RASGAGGQHVN T+SAVR+TH+PT VV Q RSQHKNK +AW +LRA Sbjct: 170 IDPKEVKLEVMRASGAGGQHVNKTESAVRLTHMPTNTVVAMQDSRSQHKNKEKAWALLRA 229 Query: 283 KLYELELQKR-EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++ + +KR EE+AN+ S +G G ++R+Y Q V D R+ DV+ Sbjct: 230 RIAQTRREKREEEMANMRRSVIGVARMGRGDKVRTYNWG-QQRVTDHRSGTTVHDLDDVM 288 Query: 340 DG 341 G Sbjct: 289 GG 290 >gi|119629057|gb|EAX08652.1| mitochondrial translational release factor 1, isoform CRA_c [Homo sapiens] Length = 487 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 104/256 (40%), Positives = 146/256 (57%), Gaps = 27/256 (10%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE ++T D K+ + Y + F+SL+ E D ND LEV AG GG Sbjct: 190 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 239 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 240 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 299 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 300 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 358 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESS 302 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ +E KR++ + + Sbjct: 359 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQS----AR 414 Query: 303 KTEIGWGRQ---IRSY 315 K ++G Q IR+Y Sbjct: 415 KLQVGTRAQSERIRTY 430 >gi|296203802|ref|XP_002749048.1| PREDICTED: peptide chain release factor 1, mitochondrial [Callithrix jacchus] Length = 488 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 100/254 (39%), Positives = 146/254 (57%), Gaps = 23/254 (9%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE +++Q K+ + Y + F+SL+ E D ND LEV +G GG Sbjct: 191 LQELALEERQ-TLVQ---------KINMLYSELFQSLVPKEKYDKNDVILEVTSGKTTGG 240 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G + Y LK E G+ Sbjct: 241 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 300 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ + P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 301 HRVQRIPEVGLSSRMQRIHTGTMSVIILPQPDE-VDVKLDPKDLRIDTFRARGAGGQHVN 359 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+ HIPTG+VV+CQQERSQ +NK A ++LRA+LY+ ++K + + K Sbjct: 360 TTDSAVRLVHIPTGLVVECQQERSQIRNKEIALSVLRARLYQQIIEKNK--CQQHSTRKL 417 Query: 305 EIGWGRQ---IRSY 315 ++G G Q IR+Y Sbjct: 418 QVGTGAQSERIRTY 431 >gi|325067255|ref|ZP_08125928.1| peptide chain release factor 1 [Actinomyces oris K20] Length = 397 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 82/174 (47%), Positives = 108/174 (62%), Gaps = 7/174 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS D +EV AG GG ES +A+ L RMY+R+AE++ + E L+ D + G K L I Sbjct: 212 DSRDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAI 271 Query: 173 K--GP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K GP + LK E GVHR+ R+ +S R HTS + + V P DD E++I Sbjct: 272 KARGPVEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDA 331 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +NK A + Sbjct: 332 ADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMRV 385 >gi|149003372|ref|ZP_01828261.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69] gi|147758555|gb|EDK65553.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69] Length = 145 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 71/139 (51%), Positives = 97/139 (69%) Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ N Sbjct: 2 PELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYGN 61 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 62 RDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFEV 121 Query: 333 TSPSDVLDGDLDDFMKATL 351 V+DGDLD F+ A L Sbjct: 122 AQVDKVMDGDLDGFIDAYL 140 >gi|297567138|ref|YP_003686110.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946] gi|296851587|gb|ADH64602.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946] Length = 364 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 85/240 (35%), Positives = 137/240 (57%), Gaps = 13/240 (5%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + +E+ AG GG E+ +A L M +A ++ F+TE L+++ + G+ + + G Sbjct: 106 NVIVEIRAGTGGEEAALFAAELRDMIMEFARRKGFRTEILDVNLTDLGGVSKVSFEVIGA 165 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG LK E GVHR+ R+ ++ R HTS +++ V P ++ +++E+ +D I RA Sbjct: 166 GAYGVLKYEAGVHRVQRVPATEAQGRIHTSTATVAVMPEAEE-VDVELDPADLEITVSRA 224 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE------L 289 SG GGQ VNTTDSAV++ H PTG++V C + RSQ KNK +A +LR++L E++ Sbjct: 225 SGPGGQGVNTTDSAVQVLHKPTGMIVSCMESRSQIKNKEKALTILRSRLLEMKRAEEAAR 284 Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 ++ + +A IG ++E +IR+Y P V D R + VL GDL + +A Sbjct: 285 RREDRLAQIGAGERSE-----KIRTYNF-PQSRVTDHRIGFTTHNLEGVLSGDLFELHEA 338 >gi|194377328|dbj|BAG57612.1| unnamed protein product [Homo sapiens] Length = 468 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/257 (40%), Positives = 147/257 (57%), Gaps = 29/257 (11%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE ++T D K+ + Y + F+SL+ E D ND LEV AG GG Sbjct: 161 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 210 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 211 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 270 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 271 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 329 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIA----NI 298 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ +E KR++ + + Sbjct: 330 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQV 389 Query: 299 GESSKTEIGWGRQIRSY 315 G +++E +IR+Y Sbjct: 390 GTRAQSE-----RIRTY 401 >gi|294790651|ref|ZP_06755809.1| peptide chain release factor 1 [Scardovia inopinata F0304] gi|294458548|gb|EFG26901.1| peptide chain release factor 1 [Scardovia inopinata F0304] Length = 365 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 115/321 (35%), Positives = 172/321 (53%), Gaps = 14/321 (4%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P + N + + L R L ++ ++ + RL D+L + EDD + L Sbjct: 27 PEIASNPDKIRKLGRRHAELAQIVTAYQDYK-RLSDDLDAAKEFAAEDDS--FAAEAQRL 83 Query: 93 QRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + E K +L+ + D + D +E+ AGAGG E+ +A LLRMYTR+AEKR + Sbjct: 84 EEKLPAAEEKLRTALIPRDPDDARDTIMEIKAGAGGEEAALFAGDLLRMYTRYAEKRGWA 143 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYG-----W--LKGEQGVHRLVRISPYDSNSRRHT 204 TE + + E G+K + + A W LK E GVHR+ RI +S R T Sbjct: 144 TEIMSQNMTELGGVKDIQIAFRNKGAVAPEDGVWASLKYEGGVHRVQRIPVTESQGRIQT 203 Query: 205 SFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 S + + V+P DD EIEI D +ID + +SG GGQ VNTT SAVR+THIPTG+VV Sbjct: 204 SAAGVIVFPEADDDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSM 263 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 Q E+SQ +N+A A +L+++L ++ ++ +E A++ S + +IR+Y P Sbjct: 264 QDEKSQIQNRAAALRVLKSRLLAMKHEEEAQEAADMRHSQVRSLDRSERIRTYNF-PENR 322 Query: 323 VKDLRTNIEKTSPSDVLDGDL 343 + D RTN + + VLDGDL Sbjct: 323 IVDHRTNYKAYNLDAVLDGDL 343 >gi|84996385|ref|XP_952914.1| peptide chain release factor [Theileria annulata strain Ankara] gi|65303911|emb|CAI76290.1| peptide chain release factor, putative [Theileria annulata] Length = 364 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 91/278 (32%), Positives = 138/278 (49%), Gaps = 39/278 (14%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-----------KRKFKTEALEIHDGE 161 D N L + +G GG+ES DW +L MY ++ + + +++ G Sbjct: 83 DRNSCKLIIKSGVGGSESFDWCRILTEMYKKFISHYEPPDSDDNFPSSLRLKEVDVCPGS 142 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE- 220 G + + G AY LKGE G HRL+R SP++S ++R TSF S+ V P++ D+ E Sbjct: 143 TGGFRRVEFDVIGDYAYRLLKGENGTHRLIRNSPFNSENKRQTSFGSVQVVPILSDTDEE 202 Query: 221 -------IEISESDCRIDTYRASGAGGQHVNTTDSA--------------------VRIT 253 ++ + D I++ R+SG GGQ+VN ++A VR+ Sbjct: 203 VVNFKKNRQLLKKDLIIESMRSSGKGGQNVNKVETAGNLLFLKSIFTKSTIDIFVLVRVY 262 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+ V+ QQER+ +N+ A ML + + L+K E N + WG IR Sbjct: 263 HKPTGLSVKVQQERTNTQNREIAIRMLTKLVDQHYLKKLNEKVNEIKGEDLVGTWGSHIR 322 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +Y L P Q VKD RTN E + ++VL+GDL F+ L Sbjct: 323 TYTLNPEQRVKDHRTNFETSKATNVLNGDLLPFILTYL 360 >gi|126728795|ref|ZP_01744610.1| peptide chain release factor 1 [Sagittula stellata E-37] gi|126710725|gb|EBA09776.1| peptide chain release factor 1 [Sagittula stellata E-37] Length = 349 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 113/313 (36%), Positives = 167/313 (53%), Gaps = 11/313 (3%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-- 102 L RE L + I E +RL ++ E L + + L E R L K Sbjct: 31 LGREFAELSPVVRQIAE-WERLTSDIEEAEAMLADPEMRALAEEELPDLRAALPAAEKAV 89 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L AD+ A LE+ G GG E+ +A L RMY R+AE ++ + +E E Sbjct: 90 QLALLPKDAADARPAVLEIRPGTGGDEAALFAGDLARMYQRYAEAHGWRWDVIEEQMSEL 149 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G+K + + G + LK E GVHR+ R+ +S R HTS +++ V P ++ ++I Sbjct: 150 GGVKELVVRVVGEGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAEE-VDIA 208 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+ +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +LR Sbjct: 209 IAAADIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVV-TSSEKSQHRNREIAMQVLRT 267 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 +L++LE K + A K ++G G +IR+Y P + D R + ++ Sbjct: 268 RLFDLERSKAD--AARSADRKAQVGSGDRSERIRTYNF-PQGRMTDHRIGLTLYKLDAIM 324 Query: 340 DGDLDDFMKATLA 352 GDLD+ + A ++ Sbjct: 325 GGDLDEIIDALIS 337 >gi|114651379|ref|XP_001150035.1| PREDICTED: mitochondrial translational release factor 1 isoform 1 [Pan troglodytes] Length = 455 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 103/257 (40%), Positives = 147/257 (57%), Gaps = 29/257 (11%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE ++T D K+ + Y + F+SL+ E D ND LEV AG GG Sbjct: 148 LQELALEE------RQTIDQ----KINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 316 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIA----NI 298 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ +E KR++ + + Sbjct: 317 KTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQV 376 Query: 299 GESSKTEIGWGRQIRSY 315 G +++E +IR+Y Sbjct: 377 GTRAQSE-----RIRTY 388 >gi|121727222|ref|ZP_01680389.1| peptide chain release factor 1 [Vibrio cholerae V52] gi|121630467|gb|EAX62860.1| peptide chain release factor 1 [Vibrio cholerae V52] Length = 193 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 80/181 (44%), Positives = 116/181 (64%), Gaps = 6/181 (3%) Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G AYG LK E G HR+ R+ ++ R HTS ++ V P + ++ EI SD +IDT+ Sbjct: 1 GDGAYGTLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTF 60 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR Sbjct: 61 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKR- 119 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 A I ++ + +G G +IR+Y P V D R N+ ++V++GD+ + Sbjct: 120 -AAEISDTRRNLLGSGDRSDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPV 177 Query: 351 L 351 + Sbjct: 178 I 178 >gi|33241132|ref|NP_876074.1| peptide chain release factor 1 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81663962|sp|Q7V9Z0|RF1_PROMA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33238662|gb|AAQ00727.1| Protein chain release factor A [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 365 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 91/244 (37%), Positives = 135/244 (55%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D LE+ AGAGG E+ WA L RMY R+ K + +A+ + + G + + + Sbjct: 112 DERSVMLEIRAGAGGDEACIWAGDLARMYERYGLKVGWVVKAMSATEADLGGFRELIISV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG + LK E GVHR+ R+ +S R HTS +++ V P D +E+++ +D I T Sbjct: 172 KGKAVFSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-PVEVKLEPTDLEIST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C QERSQ +N+ +A +LRAKL E E+++ Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREIEE- 289 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMK 348 AN E S G RS ++ Y KD RT + + VL+G+LDD + Sbjct: 290 ---ANAKERSARLAQVGTGDRSEKIRTYNY-KDNRTTDHRLGVNFPLETVLEGELDDLIG 345 Query: 349 ATLA 352 A +A Sbjct: 346 ACIA 349 >gi|19921226|ref|NP_609617.1| CG5705 [Drosophila melanogaster] gi|7298021|gb|AAF53262.1| CG5705 [Drosophila melanogaster] gi|16769148|gb|AAL28793.1| LD18447p [Drosophila melanogaster] gi|220943136|gb|ACL84111.1| CG5705-PA [synthetic construct] gi|220953196|gb|ACL89141.1| CG5705-PA [synthetic construct] Length = 392 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/173 (45%), Positives = 113/173 (65%), Gaps = 1/173 (0%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGG E+ +A L MYT + E ++ E + G++ A+L++ G +A+ W Sbjct: 135 LNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHASLMVSGEDAFRW 194 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHR+ R+ + + R HTS +SI V P D I++ I+E D +I+T RASGAGG Sbjct: 195 LRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-IQVHIAEKDLKIETKRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 QHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A LR++L + +L+ E Sbjct: 254 QHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVE 306 >gi|145362209|ref|NP_973706.2| peptide chain release factor, putative [Arabidopsis thaliana] gi|110735990|dbj|BAE99969.1| putative peptide chain release factor [Arabidopsis thaliana] gi|330255694|gb|AEC10788.1| Peptide chain release factor 1 [Arabidopsis thaliana] Length = 256 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 73/164 (44%), Positives = 109/164 (66%), Gaps = 1/164 (0%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD D LEV AG GG E+ +A + RMY R+++K+ +K + ++I + + G K A+ Sbjct: 93 EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASA 152 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G + YG LK E G+HR+ RI + + R HTS S+ + P D+ +++++ D RI Sbjct: 153 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADE-VDVQLRNEDLRI 211 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 DTYR+ G+GGQH NTT+SAVRI H+PTG++V Q ERSQH +++ Sbjct: 212 DTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMSQS 255 >gi|315604645|ref|ZP_07879708.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180 str. F0310] gi|315313657|gb|EFU61711.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180 str. F0310] Length = 364 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/240 (41%), Positives = 132/240 (55%), Gaps = 9/240 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D LE+ AG GG ES +A+ L RMY R+AE + L E G K TL I Sbjct: 105 DAMDVILEIKAGEGGEESALFASDLARMYGRYAEAHGWSVTELSATHTELGGFKDVTLAI 164 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 + P+ W LK E GVHR+ R+ +S R HTS ++V P ++D EI I Sbjct: 165 RAKGTPAPDEGVWAHLKYEGGVHRVQRVPITESQGRIHTSAVGVFVMPEIEDDDEIVIDP 224 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVRITH+P+G+VV Q E+SQ +NK A +L ++L Sbjct: 225 ADLRIDVYRSSGPGGQSVNTTDSAVRITHLPSGIVVSMQNEKSQLQNKEAALRVLASRLA 284 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 KRE A+ S+ + +IR+Y P + D RT + + VL G LD Sbjct: 285 AEARAKREAEASAQRLSQVRTVDRSERIRTYNF-PENRIADHRTGFKAHNLDAVLSGALD 343 >gi|322389535|ref|ZP_08063086.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC 903] gi|321143810|gb|EFX39237.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC 903] Length = 359 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D RID Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRIDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|83773134|dbj|BAE63261.1| unnamed protein product [Aspergillus oryzae] Length = 388 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 111/315 (35%), Positives = 163/315 (51%), Gaps = 37/315 (11%) Query: 53 DNAISFIKEIQDRLCD---NLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESL 107 D A I E+ L D +L L LA+E+ + + L S+NL+ K V F +L Sbjct: 48 DRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTISENLK--KALVPRHPFAAL 105 Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA--LEIHDGE-EAG 164 LE+ GAGG E+ +A LLRMYT + +R F++ LE+ DG E Sbjct: 106 --------PCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLEVGDGPAEDR 157 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-------VVDD 217 + A + ++ AY L+ E GVHR+ R+ ++ R HTS S+ V P +D+ Sbjct: 158 LNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPETGGAMDN 217 Query: 218 SIEIEISESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 ++ + SD +D RA GAGGQHVN T+SA+R+TH+PTG+VV Q RSQH Sbjct: 218 ALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQH 277 Query: 271 KNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 N+ +AW +LRA+L E + RE E+ +G G +IR+Y + D Sbjct: 278 ANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNYGQSR-CTDH 336 Query: 327 RTNIEKTSPSDVLDG 341 R++I + +DVLDG Sbjct: 337 RSSITIHNLNDVLDG 351 >gi|296876522|ref|ZP_06900573.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC 15912] gi|296432515|gb|EFH18311.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC 15912] Length = 359 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D RID Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRIDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|319947033|ref|ZP_08021267.1| peptide chain release factor RF1 [Streptococcus australis ATCC 700641] gi|319747081|gb|EFV99340.1| peptide chain release factor RF1 [Streptococcus australis ATCC 700641] Length = 359 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D RID Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRIDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|22537235|ref|NP_688086.1| peptide chain release factor 1 [Streptococcus agalactiae 2603V/R] gi|32171547|sp|Q8DZM4|RF1_STRA5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|22534102|gb|AAM99958.1|AE014241_9 peptide chain release factor 1 [Streptococcus agalactiae 2603V/R] Length = 359 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 144/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E EI + D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYEIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDAE----RKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDTILSGKMDEVIDA 344 >gi|76788237|ref|YP_329784.1| peptide chain release factor 1 [Streptococcus agalactiae A909] gi|77405475|ref|ZP_00782567.1| peptide chain release factor 1 [Streptococcus agalactiae H36B] gi|119361618|sp|Q3K119|RF1_STRA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|76563294|gb|ABA45878.1| peptide chain release factor 1 [Streptococcus agalactiae A909] gi|77175872|gb|EAO78649.1| peptide chain release factor 1 [Streptococcus agalactiae H36B] Length = 359 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 144/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E EI + D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYEIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDTILSGKMDEVIDA 344 >gi|25011160|ref|NP_735555.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316] gi|76798425|ref|ZP_00780665.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21] gi|77408667|ref|ZP_00785400.1| peptide chain release factor 1 [Streptococcus agalactiae COH1] gi|77410552|ref|ZP_00786913.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111] gi|77413289|ref|ZP_00789485.1| peptide chain release factor 1 [Streptococcus agalactiae 515] gi|32171550|sp|Q8E5C3|RF1_STRA3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|23095559|emb|CAD46768.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316] gi|76586220|gb|EAO62738.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21] gi|77160676|gb|EAO71791.1| peptide chain release factor 1 [Streptococcus agalactiae 515] gi|77163500|gb|EAO74450.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111] gi|77172715|gb|EAO75851.1| peptide chain release factor 1 [Streptococcus agalactiae COH1] gi|319745079|gb|EFV97405.1| peptide chain release factor RF1 [Streptococcus agalactiae ATCC 13813] Length = 359 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 144/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E EI + D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYEIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDTILSGKMDEVIDA 344 >gi|254577375|ref|XP_002494674.1| ZYRO0A07040p [Zygosaccharomyces rouxii] gi|238937563|emb|CAR25741.1| ZYRO0A07040p [Zygosaccharomyces rouxii] Length = 393 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 123/220 (55%), Gaps = 9/220 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNA 177 LE+ G GGTE+ + LL MY +A+ +K + ++ + G+ A L I P A Sbjct: 140 LELRPGVGGTEAMIFTQDLLNMYIGYAQYHHWKYHVIAQNENQSGNGLVDAILSIDEPGA 199 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI------EIEISESDCRID 231 Y LK E GVHR+ RI ++ R HTS +++ V P + +S+ E + RID Sbjct: 200 YDKLKYESGVHRVQRIPATETKGRTHTSTAAVIVLPQIVESVKDAEQSERSFRPDEIRID 259 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 RA G GGQHVNTTDSAVRITH P+G+VV Q ERSQHKNKA+A+ +LRA+L E E ++ Sbjct: 260 VMRAGGKGGQHVNTTDSAVRITHFPSGIVVAMQDERSQHKNKAKAFAVLRARLAERERKE 319 Query: 292 REEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNI 330 +E + T +IR+Y P + D R N Sbjct: 320 KENSERAARKDQVTTTDRSDKIRTYNY-PQNRITDHRCNF 358 >gi|195472530|ref|XP_002088553.1| GE18626 [Drosophila yakuba] gi|194174654|gb|EDW88265.1| GE18626 [Drosophila yakuba] Length = 392 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 123/198 (62%), Gaps = 6/198 (3%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGG E+ +A L MYT + + + E + G++ A+L++ G +A+ W Sbjct: 135 LNAGAGGQEAMLFAQELYEMYTGYFDHMGWNWEEFAGESTDIGGLRHASLMVSGEDAFRW 194 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHR+ R+ + + R HTS +SI V P D I++ I+E D +I+T RASGAGG Sbjct: 195 LRFEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-IQVHIAEKDLKIETKRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A LR++L + +L+ E AN Sbjct: 254 QHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVE--ANKMA 311 Query: 301 SSKTEIG---WGRQIRSY 315 + K + G +IR+Y Sbjct: 312 TKKAQQGSLNRNEKIRTY 329 >gi|302307223|ref|NP_983812.2| ADL284Cp [Ashbya gossypii ATCC 10895] gi|299788896|gb|AAS51636.2| ADL284Cp [Ashbya gossypii ATCC 10895] Length = 397 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 95/247 (38%), Positives = 139/247 (56%), Gaps = 29/247 (11%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK---TEALEIHDGEEAGIKSATLLIKGP 175 +E+ G GG E+ + LL MY +A+ ++K T A E G AG+ A L I P Sbjct: 139 VELRPGVGGIEAMIFTQDLLNMYIGYAQHHRWKWSVTSATENTTG--AGLSEAILSIDEP 196 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-----DDSIEIEISESDCRI 230 +Y LK E GVHR+ RI +S R HTS +++ V P + D+ E + RI Sbjct: 197 GSYDRLKFESGVHRVQRIPATESKGRTHTSTAAVVVLPKMAEEAESDAYERTFKPGEIRI 256 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D RASG GGQHVNTTDSAVRITH P+G+ + Q+ERSQH+NKA+A+ +LRAKL +LE + Sbjct: 257 DVMRASGKGGQHVNTTDSAVRITHFPSGIAIHMQEERSQHRNKAKAFQILRAKLADLERK 316 Query: 291 ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +++++++ S K IR+Y P V D R + + ++V+ G Sbjct: 317 EREARERSARKDQVSSTDRSDK--------IRTYNF-PQNRVTDHRCAVSLHALAEVVTG 367 Query: 342 D-LDDFM 347 + LD+ + Sbjct: 368 ERLDELI 374 >gi|67969776|dbj|BAE01236.1| unnamed protein product [Macaca fascicularis] Length = 378 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 96/227 (42%), Positives = 133/227 (58%), Gaps = 18/227 (7%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGG 127 L ELALEE ++T D K+ + Y + F+SLL E D ND LEV +G GG Sbjct: 81 LQELALEE------RQTIDQ----KINMLYNELFQSLLPKEKYDKNDVILEVTSGRTTGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G + Y LK E G+ Sbjct: 131 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 190 Query: 188 HRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR HT S+ V P D+ +++++ D RIDT+RA GAGGQHVN Sbjct: 191 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE-VDVKLDPKDLRIDTFRAKGAGGQHVN 249 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TT SAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K Sbjct: 250 TTVSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK 296 >gi|313889382|ref|ZP_07823030.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN 20026] gi|313122214|gb|EFR45305.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN 20026] Length = 359 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 92/260 (35%), Positives = 143/260 (55%), Gaps = 14/260 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLVMYQKFAESQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P ++ Sbjct: 153 ASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D +E EI D R+D Y ASGAGGQ+VN +AVRI HIPT + V+ Q+ER+Q KN+ +A Sbjct: 213 D-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRIVHIPTNIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ IG G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDAE----RKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKATL 351 +L G +D+ + A + Sbjct: 327 LQKLDTILSGKMDEIVDALI 346 >gi|322391878|ref|ZP_08065343.1| peptide chain release factor RF1 [Streptococcus peroris ATCC 700780] gi|321145358|gb|EFX40754.1| peptide chain release factor RF1 [Streptococcus peroris ATCC 700780] Length = 359 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/242 (36%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D RID Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRIDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|114052118|ref|NP_001040455.1| mitochondrial translational release factor 1 [Bombyx mori] gi|95102962|gb|ABF51422.1| mitochondrial translational release factor 1 [Bombyx mori] Length = 401 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 155/298 (52%), Gaps = 19/298 (6%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 LS + +E+ Q + ++ +R L ++I +KE+ + D+ + ++ EE Sbjct: 53 LSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAI 112 Query: 83 SI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + L+E D+LQ I LL LE+ AGAGG E+ +A L M Sbjct: 113 YLKRLKEIDDDLQLI-----------LLEPPLTEGGVLLELTAGAGGQEAMLFAKELFNM 161 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y +A + ++ + E G++ ++LI+G ++ E GVHR+ RI + Sbjct: 162 YQSYAINKGWEVDIASFDLTEIGGVRKGSMLIQGFGVPELMRMEAGVHRVQRIPATEKGG 221 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ + P + IE+ I E D I+T RASGAGGQHVNTTDSAVR+ H PTG Sbjct: 222 RIHTSTVTVAILPQPSE-IELNIPERDVVIETKRASGAGGQHVNTTDSAVRLIHTPTGTT 280 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 V+CQ+ RSQ KNK A LR L E ++Q E+ + K+++G G +IR+Y Sbjct: 281 VECQEGRSQIKNKQIAMQKLRTLLLEKQIQ--EQALKLQSERKSQVGSGNRNEKIRTY 336 >gi|194860855|ref|XP_001969666.1| GG23822 [Drosophila erecta] gi|190661533|gb|EDV58725.1| GG23822 [Drosophila erecta] Length = 392 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 5/205 (2%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGG E+ +A L MYT + E ++ E + G++ A+L++ G +A+ W Sbjct: 135 LNAGAGGQEAMLFAQELYEMYTGFFEHMGWEWEEFASEITDIGGLRHASLMVSGEDAFRW 194 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHR+ R+ + + R HTS +SI V P D I + I+E D +I+T RASGAGG Sbjct: 195 LRHEAGVHRVQRVPATEKSGRMHTSTASITVIPRPAD-IHVHIAEKDLKIETKRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A LR++L +Q++ E A + Sbjct: 254 QHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRL----VQQQLESAEASK 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKD 325 + + G R+ ++ Y V+D Sbjct: 310 MATKKAQQGSLNRNEKIRTYNFVQD 334 >gi|260944632|ref|XP_002616614.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720] gi|238850263|gb|EEQ39727.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720] Length = 406 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 103/273 (37%), Positives = 145/273 (53%), Gaps = 19/273 (6%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSN-DAYLEVHAGAG 126 LLE+ E+ D +++E ++ L+ + V K SL L SN A LE+ G G Sbjct: 98 LLEIINEDLDAELVEEANEELKEVVPRV-VKASSSLKKRLLPPIVHSNKPAILELRPGVG 156 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G+E+ + LL MY +A + + L + A + I P AY L+ E G Sbjct: 157 GSEAALFTQDLLNMYINFANYMSWPYKILSESHSSNGFLNEAIISIDAPGAYNVLRHESG 216 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-------SDCRIDTYRASGAG 239 VHR+ RI +S R HTS +++ V P + D E + E + RIDT R+ G G Sbjct: 217 VHRVQRIPATESKGRIHTSTAAVVVLPKMSDGTEQSLKEDERSFAPGEIRIDTMRSGGKG 276 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA--- 296 GQHVNTTDSAVRI HIPTG++V Q ERSQ KNKA+A+++LR++L ++E +K EIA Sbjct: 277 GQHVNTTDSAVRIVHIPTGIMVVQQDERSQPKNKAKAFSILRSRLAQMEREK--EIAEQK 334 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + T +IR+Y P V D R N Sbjct: 335 KLRSDQVTTTDRSDKIRTYNY-PQNRVTDHRCN 366 >gi|330802966|ref|XP_003289482.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum] gi|325080440|gb|EGC33996.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum] Length = 226 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 131/218 (60%), Gaps = 13/218 (5%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY + E++ +K E LE E G + T+ I G +G+LK E GVHR+ R+ ++ Sbjct: 1 MYRNYCEQKGWKFETLESQSSEVGGFRDCTISISGKGVFGFLKYESGVHRVQRVPDTETQ 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ + P + ++++I + D ++D +R+SG GGQ VNTTDSAVR+TH+PTG+ Sbjct: 61 GRIHTSTITVAILPEPKE-VDLQIHDRDIKVDVFRSSGNGGQSVNTTDSAVRMTHLPTGI 119 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQK------REEIANIGESSKTEIGWGRQIR 313 VVQ Q ERSQ +N+A+A +LRA++YE E Q+ RE + IG ++++E +IR Sbjct: 120 VVQMQDERSQLQNRAKALKILRARVYEQERQRLHSERERERNSQIGNATRSE-----RIR 174 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +Y P + D R +I S + + L+ F+ L Sbjct: 175 TYNY-PQDRITDHRVSINGNLSSCMEEEGLEGFIDEIL 211 >gi|317151025|ref|XP_001824394.2| peptide chain release factor 1 [Aspergillus oryzae RIB40] Length = 427 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 111/315 (35%), Positives = 163/315 (51%), Gaps = 37/315 (11%) Query: 53 DNAISFIKEIQDRLCD---NLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESL 107 D A I E+ L D +L L LA+E+ + + L S+NL+ K V F +L Sbjct: 87 DRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTISENLK--KALVPRHPFAAL 144 Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA--LEIHDGE-EAG 164 LE+ GAGG E+ +A LLRMYT + +R F++ LE+ DG E Sbjct: 145 --------PCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLEVGDGPAEDR 196 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-------VVDD 217 + A + ++ AY L+ E GVHR+ R+ ++ R HTS S+ V P +D+ Sbjct: 197 LNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPETGGAMDN 256 Query: 218 SIEIEISESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 ++ + SD +D RA GAGGQHVN T+SA+R+TH+PTG+VV Q RSQH Sbjct: 257 ALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQH 316 Query: 271 KNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 N+ +AW +LRA+L E + RE E+ +G G +IR+Y + D Sbjct: 317 ANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNYGQSRCT-DH 375 Query: 327 RTNIEKTSPSDVLDG 341 R++I + +DVLDG Sbjct: 376 RSSITIHNLNDVLDG 390 >gi|170017816|ref|YP_001728735.1| peptide chain release factor 1 [Leuconostoc citreum KM20] gi|238692786|sp|B1MVN7|RF1_LEUCK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169804673|gb|ACA83291.1| Peptide chain release factor 1 [Leuconostoc citreum KM20] Length = 357 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 107/341 (31%), Positives = 178/341 (52%), Gaps = 22/341 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCDNLILLEL 75 V R LN + DP + + + L +E R+ ++ + + + +QD + D LL Sbjct: 12 VDRYDELNEQLADPEIAGDGQKYMALSKEAGEMRETVETYLHYQQVLQD-IADAEDLL-- 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQ 131 DD + ++L +K E E + + +L D ND +E+ AGG ES Sbjct: 69 ----DDAEMAPLAKEDLNTLKPEKEALESQLKILMLPKDPNDDKNIIMEIRGAAGGDESS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LL MY R+AEK+++ ++ E G K ++I G N Y LK E G HR+ Sbjct: 125 LFAADLLDMYRRYAEKQRWTLSIIDETLTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+ E++ESD + +R+ GAGGQ+VN +AVR Sbjct: 185 RVPATETQGRVHTSTATVGVMPEFQE-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 + H PTG++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E A E K+ +G G Sbjct: 244 LVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--AEYAEKRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P V D R + V++G+L + + A Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELGEVIDA 341 >gi|154310299|ref|XP_001554481.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10] gi|150851401|gb|EDN26594.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10] Length = 402 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 93/248 (37%), Positives = 137/248 (55%), Gaps = 26/248 (10%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGEEAG----IKSATLLI 172 LE+ GAGG E+ +A LLRMY + +++F++ + E DGE AG I L I Sbjct: 122 LEIRPGAGGGEAAIFAADLLRMYRAYCARKRFRSTIIKYETTDGEGAGSDAPISEVVLEI 181 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV----------------D 216 + +Y L+GE GVHR+ R+ + R HTS S+ V P D Sbjct: 182 ESSGSYDSLRGEAGVHRVQRVPATEKQGRTHTSAVSVMVLPSFPTTGQEGQEYWEADLND 241 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + + ++ +D R D RA GAGGQHVNTTDSAVR+TH+PT VV Q+ RSQ +N+ +A Sbjct: 242 PNSDYYVNPADVRTDVMRARGAGGQHVNTTDSAVRLTHVPTNTVVSMQEGRSQLQNRQKA 301 Query: 277 WNMLRAKLYELELQKREE-IANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 W +LR++L + + REE + N+ S ++G G +IR+Y Q V D R+ + Sbjct: 302 WQVLRSRLAAAKREAREEQLINLRRSVIGVAKMGRGDKIRTYNWG-QQRVTDHRSGLSVH 360 Query: 334 SPSDVLDG 341 + DV++G Sbjct: 361 NLDDVMEG 368 >gi|125984748|ref|XP_001356138.1| GA19071 [Drosophila pseudoobscura pseudoobscura] gi|54644457|gb|EAL33198.1| GA19071 [Drosophila pseudoobscura pseudoobscura] Length = 392 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 77/173 (44%), Positives = 109/173 (63%), Gaps = 1/173 (0%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 V+AGAGG E+ +A L MYT + E ++ E + G++ A +++ G +A+ W Sbjct: 135 VNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIGGLRHANVMVNGADAFHW 194 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHR+ R+ + R HTS SI V P D + + I+E D +I+T RASGAGG Sbjct: 195 LRFEAGVHRVQRVPATEKAGRMHTSTVSITVIPRPAD-VHVHIAEKDLKIETKRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 QHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A L+A+L + +L+ E Sbjct: 254 QHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELALKRLQARLVQQQLESSE 306 >gi|228477589|ref|ZP_04062222.1| peptide chain release factor 1 [Streptococcus salivarius SK126] gi|228250733|gb|EEK09931.1| peptide chain release factor 1 [Streptococcus salivarius SK126] Length = 359 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLAMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 ASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E EI D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDAE----RKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G LD+ + A Sbjct: 327 LQKLDTILAGKLDEVVDA 344 >gi|7573420|emb|CAB87736.1| translation releasing factor RF-1-like protein [Arabidopsis thaliana] Length = 419 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 103/340 (30%), Positives = 187/340 (55%), Gaps = 20/340 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDC 82 L+ K DP + N E + L + LD ++ + +D +L ++ +L + A +++D Sbjct: 71 LSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDM 130 Query: 83 SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + + + N ++E KQ + LL S D+ + LEV AG GG E+ W L+ Sbjct: 131 AEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVGA 190 Query: 141 YTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 ++ + LE+ +G G K+ + IKG Y LK E GVHR+ R+ ++ Sbjct: 191 DVSEVQRAQL----LEVFNGFMLRGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQ 246 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ + P D+ +E+ I D + + R+ GAGGQ+VN ++A+ + H P+G+ Sbjct: 247 GRVHTSTATVAIMPEADE-VEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGI 305 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 + C +ER+Q +NKA+A+ +LRAKLYE+++++++E I K+++G G +IR+Y Sbjct: 306 RIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERKSQVGTGARSEKIRTYN 363 Query: 317 LQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++ L+ N T+ LDG L+D ++A A+++ Sbjct: 364 YKDSRVTDHRLKMNFALTT---FLDGALEDAVQACAALEQ 400 >gi|312220543|emb|CBY00484.1| similar to peptide chain release factor 1 [Leptosphaeria maculans] Length = 418 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 93/252 (36%), Positives = 144/252 (57%), Gaps = 22/252 (8%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE---IHDGEEAGIK--SATLLIK 173 LE+ GAGG+E+ +A L RMY + + F+T L+ I+ EAG+ A L ++ Sbjct: 147 LELRPGAGGSEAAIFAGDLFRMYLAFCNRNGFRTNLLKYENINGTSEAGVPLSEAVLEVE 206 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE----------- 222 NAYG + E GVHR+ R+ ++ R HTS S+ V P + ++ E Sbjct: 207 NDNAYGVFRCEAGVHRVQRVPATETKGRTHTSAVSVHVLPSLQENNSSEENFDDPDSDYY 266 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I + +++ RASGAGGQHVN T+SAVR+TH+PT VV Q RSQHKNK +AW +LR+ Sbjct: 267 IDVKEVKVEVMRASGAGGQHVNKTESAVRLTHLPTNTVVAMQDSRSQHKNKEKAWALLRS 326 Query: 283 KLYELELQKR-EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++ + ++R EEI+N+ S ++G G ++R+Y Q V D R+ + DV+ Sbjct: 327 RIAQSRREQREEEISNMRRSVIGVAKMGRGDKVRTYNWG-QQRVTDHRSGLTVHDLDDVM 385 Query: 340 DG--DLDDFMKA 349 +G +L+ M++ Sbjct: 386 EGGQNLEKVMES 397 >gi|147836146|emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera] Length = 450 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + LL G+ D A L + AG G S+ WA LL MYT+WAEK+ +K +E + + Sbjct: 194 EMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAEQLLSMYTKWAEKQGYKGRVVEKYASKN 253 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEI 221 GIKSAT+ + YG+L GE+GVH ++R S +S T + + V P+ ++ + ++ Sbjct: 254 GGIKSATIEFESEYGYGYLSGERGVHHMIRSSDDESILHEQTGSAVVDVIPLFLETAPDL 313 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 +I + D RI + G T AV I HIPTG+ VQ ERS NK +A N L+ Sbjct: 314 QIDDGDLRISSPSCHGV---EQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLK 370 Query: 282 AKLYELELQKREEIANIGESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 AKL ++ + I +G + I W ++ R YV P ++V+D++T+I+ + VL Sbjct: 371 AKLVVTAME--QGIPEVGGIKREAIADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVL 428 Query: 340 DGDLDDFMKATLAIKK 355 DG+++ + A +++++ Sbjct: 429 DGNIEPLIGANISMRQ 444 >gi|262282281|ref|ZP_06060049.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA] gi|262261572|gb|EEY80270.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA] Length = 359 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|332523754|ref|ZP_08400006.1| peptide chain release factor 1 [Streptococcus porcinus str. Jelinkova 176] gi|332315018|gb|EGJ28003.1| peptide chain release factor 1 [Streptococcus porcinus str. Jelinkova 176] Length = 359 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 87/244 (35%), Positives = 136/244 (55%), Gaps = 11/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P ++D +E EI D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIED-VEYEIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI HIPT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G +D+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVI 342 Query: 348 KATL 351 A + Sbjct: 343 DALI 346 >gi|327460378|gb|EGF06715.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1057] Length = 359 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D RID Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRIDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|290580477|ref|YP_003484869.1| putative peptide chain release factor 1 [Streptococcus mutans NN2025] gi|254997376|dbj|BAH87977.1| putative peptide chain release factor 1 [Streptococcus mutans NN2025] Length = 359 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 91/260 (35%), Positives = 142/260 (54%), Gaps = 14/260 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ L D ND LE+ AGG E+ +A LL MY ++AE + +K E +E Sbjct: 93 EYEEKLKFLLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAENQGWKFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 G+K ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 ASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E EI D R+D Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRIIHLPTNIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKATL 351 +L G LD+ + A + Sbjct: 327 LQKLDSILSGKLDEVIDALI 346 >gi|297693940|ref|XP_002824258.1| PREDICTED: peptide chain release factor 1, mitochondrial-like isoform 1 [Pongo abelii] gi|297693942|ref|XP_002824259.1| PREDICTED: peptide chain release factor 1, mitochondrial-like isoform 2 [Pongo abelii] Length = 445 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 92/223 (41%), Positives = 130/223 (58%), Gaps = 16/223 (7%) Query: 104 FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 F+SL+ E D ND LEV AG GG Q + + MY ++ + ++ E L Sbjct: 171 FQSLVPKEKYDKNDVILEVAAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPA 230 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217 + G+ A I G Y LK E G+HR+ RI +SR HT +S+ V P D+ Sbjct: 231 DYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTTSVIVLPQPDE 290 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D RIDT+RA G GGQHVN TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ Sbjct: 291 -VDVKLDPKDLRIDTFRAKGPGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAF 349 Query: 278 NMLRAKLYE--LELQKREEIANIGESSKTEIGWGRQ---IRSY 315 +LRA+LY+ +E KR++ + + K ++G Q IR+Y Sbjct: 350 RVLRARLYQQIIEKDKRQQQS----ARKLQVGTRAQSERIRTY 388 >gi|33864028|ref|NP_895588.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9313] gi|81576937|sp|Q7V518|RF1_PROMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33635612|emb|CAE21936.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9313] Length = 365 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 93/250 (37%), Positives = 136/250 (54%), Gaps = 10/250 (4%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S D LE+ AGAGG E+ WA L RMY R+ ++ + + L + + G + Sbjct: 106 LPSDPRDQRSVMLEIRAGAGGNEACLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFR 165 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 L IKG + LK E GVHR+ R+ +S R HTS +++ V P D++E++I S Sbjct: 166 ELILSIKGDAVFSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DAVEVQIDPS 224 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 + I T R+ GAGGQ+VN ++AV + H PTG+ V C Q+RSQ +N+ +A +LRAKL E Sbjct: 225 ELEISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKLLE 284 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGD 342 ++ + AN ESS G RS ++ Y KD RT + S VL G Sbjct: 285 RQIAE----ANARESSTRRAQVGTGDRSEKIRTYNY-KDNRTTDHRLGRNFSLEPVLTGQ 339 Query: 343 LDDFMKATLA 352 L++ + A +A Sbjct: 340 LEELIGACIA 349 >gi|312863805|ref|ZP_07724043.1| peptide chain release factor 1 [Streptococcus vestibularis F0396] gi|311101341|gb|EFQ59546.1| peptide chain release factor 1 [Streptococcus vestibularis F0396] Length = 359 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 105/320 (32%), Positives = 168/320 (52%), Gaps = 25/320 (7%) Query: 38 NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97 N E + RE + + +IS +E+ + L E+A EE L+E+ + Sbjct: 42 NTRETVTVYREYKQVIQSISDAEEMIKEASGDPDLEEMAKEE-----LKESKAAKE---- 92 Query: 98 EVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E Sbjct: 93 --EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLAMYQKYAETQGWRFEV 150 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P Sbjct: 151 MEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPE 210 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 V++ +E EI D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ Sbjct: 211 VEE-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRD 269 Query: 275 QAWNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329 +A ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R Sbjct: 270 KAMKIIRARVADHFAQIAQDEQDAE----RKSTVGTGDRSERIRTYNF-PQNRVTDHRIG 324 Query: 330 IEKTSPSDVLDGDLDDFMKA 349 + +L G +D+ + A Sbjct: 325 LTLQKLDTILAGKMDEVIDA 344 >gi|260435474|ref|ZP_05789444.1| peptide chain release factor 1 [Synechococcus sp. WH 8109] gi|260413348|gb|EEX06644.1| peptide chain release factor 1 [Synechococcus sp. WH 8109] Length = 365 Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 31/347 (8%) Query: 24 SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ----DRLCDNLILLE--- 74 SF N + + DP + + + + RER L+ + +E+Q +R +L + Sbjct: 16 SFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQLLKDSRG 75 Query: 75 -LALEE---DDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 A+EE D+ + LQE L +R+ L + L D LE+ AGAGG E Sbjct: 76 DAAMEELAQDELASLQEQHATLTERLTLAL-------LPRDPRDERSVMLEIRAGAGGDE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + WA L RMY R+++K + +++ + + G + L ++G + Y LK E GVHR Sbjct: 129 ACLWAGDLARMYERYSQKVGWAVQSMSCTEADLGGFRELILSVRGESVYSQLKFEAGVHR 188 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P D++E+++ D I T R+ GAGGQ+VN ++A Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEA-DAVEVQLDPKDLDISTARSGGAGGQNVNKVETA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 V + H PTG+ V C QERSQ +N+ +A +LRAKL L++ + A ESS G Sbjct: 248 VDLLHKPTGIRVFCTQERSQLQNRERALEILRAKL----LEREQAAAAERESSDRRAQVG 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352 RS ++ Y KD RT + + VL+G L+D + A +A Sbjct: 304 SGDRSEKIRTYNY-KDNRTTDHRLGRNFTLEPVLEGQLEDLIGACIA 349 >gi|150865313|ref|XP_001384475.2| hypothetical protein PICST_58482 [Scheffersomyces stipitis CBS 6054] gi|149386569|gb|ABN66446.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 376 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 80/182 (43%), Positives = 108/182 (59%), Gaps = 7/182 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A LE+ G GG+E+ +A L++MY +A ++K + +G + + I P Sbjct: 113 AILEMRPGVGGSEASLFAGDLMQMYINFANHMRWKYTIVSKSEGNGGFVNEVIMSIDTPG 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-------SDCR 229 +Y L+ E GVHR+ RI +S R HTS ++I V P + D E + E + R Sbjct: 173 SYNVLRHESGVHRVQRIPSTESKGRIHTSTAAIVVLPKMSDGNESSLKEDERQFAPGEVR 232 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDT RA G GGQHVNTTDSAVR+ HIPTGV V Q ERSQ KNKA+A+++LRA+L LE Sbjct: 233 IDTMRAGGKGGQHVNTTDSAVRLVHIPTGVTVMQQDERSQPKNKAKAFSILRARLAALER 292 Query: 290 QK 291 K Sbjct: 293 DK 294 >gi|195435374|ref|XP_002065668.1| GK14545 [Drosophila willistoni] gi|194161753|gb|EDW76654.1| GK14545 [Drosophila willistoni] Length = 397 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 V++GAGG E+ +A L MYT + E + E + G++ A +LI +AY W Sbjct: 137 VNSGAGGQEAMLFAQELYEMYTSYFEHMDWDYEEFARETTDIGGLRHANILINDQDAYNW 196 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHR+ R+ + + R HTS +SI V P D +++ +E D RI+T RASGAGG Sbjct: 197 LRYEAGVHRVQRVPATEKSGRIHTSTASITVIPKPAD-VQVHTAEKDLRIETKRASGAGG 255 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 QHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A L+A+L + +L+ E Sbjct: 256 QHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNREVALKRLQARLVQQQLESSE 308 >gi|193613150|ref|XP_001944471.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Acyrthosiphon pisum] Length = 400 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 126/209 (60%), Gaps = 12/209 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LE+ AG GG E+ + L MY +A + +K+E + E GI+ A L++ Sbjct: 142 DCEDVMLEITAGVGGQEAMIFTQELFEMYNSFAHYKGWKSEVADYCHTEMGGIRHACLML 201 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y L+ E GVHR+ R+ + + R HTS ++ + P + +++ I++ D I+T Sbjct: 202 SGTDCYSLLQHEGGVHRVQRVPKTEKSGRIHTSTVTVAILPQPTE-LDVVINDRDLVIET 260 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVN TDSA+R+ H PTGV+V+CQ +RSQ KN+ A LRA +Y+ +L+++ Sbjct: 261 KRASGAGGQHVNKTDSAIRMHHKPTGVIVECQTDRSQIKNRKIALQKLRAIIYKKQLEQQ 320 Query: 293 EEIA------NIGESSKTEIGWGRQIRSY 315 + + +G S+++E +IR+Y Sbjct: 321 QSLTRSARKQQVGSSARSE-----KIRTY 344 >gi|251799802|ref|YP_003014533.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2] gi|247547428|gb|ACT04447.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2] Length = 356 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/240 (35%), Positives = 141/240 (58%), Gaps = 7/240 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGG E+ +A L RMYT++A+ + ++ E +++++ + G K +I Sbjct: 106 DDKNVIVEIRGAAGGDEAALFAYELYRMYTKFADAQGWRCELMDLNENDLGGFKEVIFMI 165 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY +K E G HR+ RI +S R HTS +S + +E+EI + D RIDT Sbjct: 166 TGKGAYSKMKYESGAHRVQRIPVTESGGRIHTS-TSTVSVMPEVEEVEVEILDKDIRIDT 224 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +SGAGGQ VNTT SAVR+ H+PTG++ CQ +SQ++NKA+A +LRA++ +++++ Sbjct: 225 FCSSGAGGQSVNTTKSAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARIS--DIRRQ 282 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 EE A K ++G G +IR+Y P V D R + V++GD+ + + + Sbjct: 283 EEEAKYAGERKLKVGTGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSVMNGDMAEIVSS 341 >gi|24379522|ref|NP_721477.1| peptide chain release factor 1 [Streptococcus mutans UA159] gi|32171546|sp|Q8DU64|RF1_STRMU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|24377463|gb|AAN58783.1|AE014946_8 putative peptide chain release factor 1 [Streptococcus mutans UA159] Length = 359 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 136/244 (55%), Gaps = 11/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + +K E +E G+K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E EI D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYEIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ +G G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVI 342 Query: 348 KATL 351 A + Sbjct: 343 DALI 346 >gi|157150598|ref|YP_001450441.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis substr. CH1] gi|172046863|sp|P47850|RF1_STRGC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157075392|gb|ABV10075.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis substr. CH1] Length = 359 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|78211899|ref|YP_380678.1| peptide chain release factor 1 [Synechococcus sp. CC9605] gi|119361630|sp|Q3AMQ9|RF1_SYNSC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78196358|gb|ABB34123.1| peptide chain release factor 1 [Synechococcus sp. CC9605] Length = 365 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 31/347 (8%) Query: 24 SFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ----DRLCDNLILLE--- 74 SF N + + DP + + + + RER L+ + +E+Q +R +L + Sbjct: 16 SFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQLLKDSRG 75 Query: 75 -LALEE---DDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 A+EE D+ + LQE L +R+ L + L D LE+ AGAGG E Sbjct: 76 DAAMEELAQDELASLQEQHATLTERLTLAL-------LPRDPRDERSVMLEIRAGAGGDE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + WA L RMY R+++K + +++ + + G + L ++G + Y LK E GVHR Sbjct: 129 ACLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQLKFEAGVHR 188 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P D++E+++ D I T R+ GAGGQ+VN ++A Sbjct: 189 VQRVPATESQGRVHTSTATVAVMPEA-DAVEVQLDPKDLDISTARSGGAGGQNVNKVETA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 V + H PTG+ V C QERSQ +N+ +A +LRAKL L++ + A ESS G Sbjct: 248 VDLLHKPTGIRVFCTQERSQLQNRERALEILRAKL----LEREQAAAAERESSDRRAQVG 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMKATLA 352 RS ++ Y KD RT + + VL+G L+D + A +A Sbjct: 304 SGDRSEKIRTYNY-KDNRTTDHRLGRNFTLEPVLEGQLEDLIGACIA 349 >gi|87124992|ref|ZP_01080839.1| peptide chain release factor [Synechococcus sp. RS9917] gi|86167312|gb|EAQ68572.1| peptide chain release factor [Synechococcus sp. RS9917] Length = 365 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 134/244 (54%), Gaps = 10/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D LE+ AGAGG E+ WA L RMY R+ ++ + + + + + G + L + Sbjct: 112 DGRSVMLEIRAGAGGDEACLWAGDLARMYERYGTRQHWTVQPVSANAADLGGYRELILSV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG + LK E GVHR+ R+ +S R HTS +++ V P D +E++I ++ I T Sbjct: 172 KGEAVFSKLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-PVEVQIDPTELEIST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C QERSQ +N+ +A +LRAKLYE +L + Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERQLAE- 289 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS----DVLDGDLDDFMK 348 AN ESS G RS ++ Y KD R + + VL+G LD+ + Sbjct: 290 ---ANARESSARRAQVGTGDRSEKIRTYN-AKDNRVTDHRLGRNFGLDPVLEGQLDEVIG 345 Query: 349 ATLA 352 A +A Sbjct: 346 ACIA 349 >gi|332366923|gb|EGJ44664.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1059] Length = 359 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|124024025|ref|YP_001018332.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9303] gi|123964311|gb|ABM79067.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9303] Length = 367 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 93/250 (37%), Positives = 136/250 (54%), Gaps = 10/250 (4%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S D LE+ AGAGG E+ WA L RMY R+ ++ + + L + + G + Sbjct: 108 LPSDPRDQRSVMLEIRAGAGGNEACLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFR 167 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 L IKG + LK E GVHR+ R+ +S R HTS +++ V P D++E++I S Sbjct: 168 ELILSIKGDAVFSQLKFEAGVHRVQRVPTTESQGRVHTSTATVAVMPEA-DAVEVQIDPS 226 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 + I T R+ GAGGQ+VN ++AV + H PTG+ V C Q+RSQ +N+ +A +LRAKL E Sbjct: 227 ELEISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKLLE 286 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGD 342 ++ + AN ESS G RS ++ Y KD RT + S VL G Sbjct: 287 RQIAE----ANARESSTRRAQVGTGDRSEKIRTYNY-KDNRTTDHRLGRNFSLEPVLTGQ 341 Query: 343 LDDFMKATLA 352 L++ + A +A Sbjct: 342 LEELIGACIA 351 >gi|325689728|gb|EGD31732.1| peptide chain release factor RF1 [Streptococcus sanguinis SK115] Length = 359 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|253795640|ref|YP_003038736.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia cicadicola Dsem] gi|253739948|gb|ACT34283.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia cicadicola Dsem] Length = 240 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 91/235 (38%), Positives = 131/235 (55%), Gaps = 9/235 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 LE+ AG GG E+ +A+ LLRMY R+A K +++ E+ G + GIK A + G Sbjct: 2 LELRAGVGGREAGLFASQLLRMYERFAAKMRWRVTLTEVSFGCDGGIKRAVADVVGEGVG 61 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 WL E GVHR+ R+ ++ R HTS ++ + P S E+ + SD +I+T RASGA Sbjct: 62 LWLAHEAGVHRVQRVPKTETRGRVHTSTVTLALLPSAGASCELGLLNSDLKIETMRASGA 121 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAVRITH+PTGV C RSQH+N+A A +LR ++ L A Sbjct: 122 GGQHVNTTDSAVRITHLPTGVTA-CASCRSQHQNRAMALKLLRERVAARALSNAAADAAG 180 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE----KTSPSDVLDGDLDDFMKA 349 +++ G R++ + Y V D T+ + + VLDG+L ++A Sbjct: 181 VRAAQVADG----ARAHRARTYSFVMDKVTDHKLGRSVVGVARVLDGELQLLVRA 231 >gi|125717977|ref|YP_001035110.1| peptide chain release factor 1 [Streptococcus sanguinis SK36] gi|166223611|sp|A3CN05|RF1_STRSV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|125497894|gb|ABN44560.1| Protein chain release factor A, putative [Streptococcus sanguinis SK36] gi|324991176|gb|EGC23110.1| peptide chain release factor RF1 [Streptococcus sanguinis SK353] gi|324994440|gb|EGC26353.1| peptide chain release factor RF1 [Streptococcus sanguinis SK678] Length = 359 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|332360425|gb|EGJ38236.1| peptide chain release factor RF1 [Streptococcus sanguinis SK355] Length = 359 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|328946334|gb|EGG40478.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1087] gi|332361225|gb|EGJ39029.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1056] Length = 359 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|332360650|gb|EGJ38459.1| peptide chain release factor RF1 [Streptococcus sanguinis SK49] Length = 359 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|323351595|ref|ZP_08087249.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66] gi|322122081|gb|EFX93807.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66] gi|324992933|gb|EGC24853.1| peptide chain release factor RF1 [Streptococcus sanguinis SK405] gi|325687437|gb|EGD29458.1| peptide chain release factor RF1 [Streptococcus sanguinis SK72] gi|325694524|gb|EGD36433.1| peptide chain release factor RF1 [Streptococcus sanguinis SK150] gi|325696481|gb|EGD38371.1| peptide chain release factor RF1 [Streptococcus sanguinis SK160] gi|327462229|gb|EGF08556.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1] gi|327470059|gb|EGF15523.1| peptide chain release factor RF1 [Streptococcus sanguinis SK330] gi|327474249|gb|EGF19656.1| peptide chain release factor RF1 [Streptococcus sanguinis SK408] gi|327489584|gb|EGF21376.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1058] Length = 359 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 137/242 (56%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+Q +A LL+MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|94988610|ref|YP_596711.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS9429] gi|94990486|ref|YP_598586.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10270] gi|94992434|ref|YP_600533.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS2096] gi|94994408|ref|YP_602506.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10750] gi|139473768|ref|YP_001128484.1| peptide chain release factor 1 [Streptococcus pyogenes str. Manfredo] gi|119361619|sp|Q1JBR9|RF1_STRPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361620|sp|Q1JLQ2|RF1_STRPC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361621|sp|Q1JGV2|RF1_STRPD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361622|sp|Q1J6M1|RF1_STRPF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223610|sp|A2REH9|RF1_STRPG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|94542118|gb|ABF32167.1| bacterial peptide chain release factor 1 (RF-1) [Streptococcus pyogenes MGAS9429] gi|94543994|gb|ABF34042.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus pyogenes MGAS10270] gi|94545942|gb|ABF35989.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus pyogenes MGAS2096] gi|94547916|gb|ABF37962.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus pyogenes MGAS10750] gi|134272015|emb|CAM30254.1| peptide chain release factor 1 [Streptococcus pyogenes str. Manfredo] Length = 359 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 144/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E +I + D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYDIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDTILSGKMDEVIDA 344 >gi|322373126|ref|ZP_08047662.1| peptide chain release factor 1 [Streptococcus sp. C150] gi|321278168|gb|EFX55237.1| peptide chain release factor 1 [Streptococcus sp. C150] Length = 359 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 143/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLNMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 ASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + ++ EI D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VDYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G LD+ + A Sbjct: 327 LQKLDTILAGKLDEVVDA 344 >gi|300175228|emb|CBK20539.2| unnamed protein product [Blastocystis hominis] Length = 299 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 94/253 (37%), Positives = 137/253 (54%), Gaps = 16/253 (6%) Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +L + D + +EV AGAGG E+ + ++ MY + + +K L + GI Sbjct: 37 TLFTPREDHKNCTIEVRAGAGGAEACLFTEDIMNMYKNYCSLKDWKWSVLSCNAPTGGGI 96 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K A + I G ++G L+ E GVHR+ R+ +S R HTS ++ V P V++ +E I Sbjct: 97 KEAIIKITGEGSFGVLRTESGVHRVQRVPETESQGRIHTSTMTVAVLPEVEN-METLIRP 155 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RID +R+SG GGQHVN T+SAVRITH+PTG+VV Q ER+QH NKA+A +L Sbjct: 156 SDLRIDLFRSSGKGGQHVNKTESAVRITHLPTGIVVSNQDERNQHMNKAKAMQIL----- 210 Query: 286 ELELQKR------EEIANIGESSKTEIGWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSD 337 + LQ R EEI + S W R + R+Y P + D R + Sbjct: 211 AIRLQNRQNSLFNEEIDSERRSYPFAFDWARCEKNRTYNY-PNSRITDHRIGLTLYGMDK 269 Query: 338 VLDGD-LDDFMKA 349 +++G+ LD+F A Sbjct: 270 MMNGELLDEFAVA 282 >gi|222153023|ref|YP_002562200.1| peptide chain release factor 1 [Streptococcus uberis 0140J] gi|254790901|sp|B9DS45|RF1_STRU0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|222113836|emb|CAR41933.1| peptide chain release factor 1 [Streptococcus uberis 0140J] Length = 359 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY R+AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLDMYQRFAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P ++D +E +I D RID Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIED-VEYDIDPKDLRIDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G +D+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVI 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|55820816|ref|YP_139258.1| peptide chain release factor 1 [Streptococcus thermophilus LMG 18311] gi|55822719|ref|YP_141160.1| peptide chain release factor 1 [Streptococcus thermophilus CNRZ1066] gi|116627620|ref|YP_820239.1| peptide chain release factor 1 [Streptococcus thermophilus LMD-9] gi|81559540|sp|Q5M0B7|RF1_STRT1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|81560720|sp|Q5M4W4|RF1_STRT2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|122267782|sp|Q03L79|RF1_STRTD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|55736801|gb|AAV60443.1| peptide chain release factor 1 [Streptococcus thermophilus LMG 18311] gi|55738704|gb|AAV62345.1| peptide chain release factor 1 [Streptococcus thermophilus CNRZ1066] gi|116100897|gb|ABJ66043.1| bacterial peptide chain release factor 1 (bRF-1) [Streptococcus thermophilus LMD-9] gi|312278142|gb|ADQ62799.1| Peptide chain release factor 1 [Streptococcus thermophilus ND03] Length = 359 Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 143/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLAMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 ASYNGVGGIKEVVAMVSGESVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E EI D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-MEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 LKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDTILAGKMDEVIDA 344 >gi|20139347|sp|Q9AG29|RF1_STRAG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|13487345|gb|AAK27505.1|AF343879_1 peptide chain release factor 1 [Streptococcus agalactiae] Length = 359 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 143/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E EI + D R D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYEIDQKDLRADIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDTILSGKMDEVIDA 344 >gi|300172696|ref|YP_003771861.1| peptide chain release factor 1 [Leuconostoc gasicomitatum LMG 18811] gi|299887074|emb|CBL91042.1| Peptide chain release factor 1 [Leuconostoc gasicomitatum LMG 18811] Length = 357 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 109/347 (31%), Positives = 180/347 (51%), Gaps = 34/347 (9%) Query: 20 VQRLSFLNTKTEDPHL------WQNVIEAKMLMRER----QHLDNAISFIKEIQDRLCDN 69 V R LN + DP + + +++ MRE H + I + +D L D Sbjct: 12 VDRYDELNEQLADPDVAGDGQQYMALLKEAGEMRETVEVYTHYQQVMQGISDAEDMLDD- 70 Query: 70 LILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125 E+A L ++D + L+ ++I LE + K +L D ND +E+ A Sbjct: 71 ---AEMAPLAKEDLNTLKP-----EKIVLEDQLK----ILMLPKDPNDDKNIIMEIRGAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG ES +A LL MY R+AEK+++ ++ E G K ++I G N Y LK E Sbjct: 119 GGDESSLFAADLLDMYRRYAEKQRWVVSIIDETITEVGGYKEVAIMITGDNVYSKLKFES 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ ++ R HTS +++ V P ++ I+ E++ESD + +R+ GAGGQ+VN Sbjct: 179 GAHRVQRVPSTETQGRVHTSTATVGVMPEFEE-IDFELAESDLEEEFFRSGGAGGQNVNK 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 +AVR+ H PTG++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E A E K+ Sbjct: 238 VSTAVRLVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--AEYAEKRKSA 295 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +G G +IR+Y P V D R + +++G+L + + A Sbjct: 296 VGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGEIVDA 341 >gi|326692970|ref|ZP_08229975.1| peptide chain release factor 1 [Leuconostoc argentinum KCTC 3773] Length = 357 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 109/347 (31%), Positives = 179/347 (51%), Gaps = 30/347 (8%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-------SFIKEIQD--RLCDNL 70 V R LN + DP + + + L +E + + I+EIQ+ L D+ Sbjct: 12 VDRYDELNEQLADPEVASDGQKYMALSKEAGEMRETVEVYTRYQQVIQEIQEAEELLDDA 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGAGG 127 + LA E D + L+ ++ +LE + K +L D ND +E+ GG Sbjct: 72 EMAPLAKE--DLADLKP-----EKAQLEDQLK----ILMLPKDPNDDKNIIMEIRGAVGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A LL MY R+AEK+++ ++ E G K ++I G N Y LK E G Sbjct: 121 DESSLFAADLLDMYRRYAEKQRWTLSIIDESMTEVGGYKEVAVMITGDNVYSKLKFESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P +D I+ E++ESD + +R+ GAGGQ+VN Sbjct: 181 HRVQRVPSTETQGRVHTSTATVGVMPEFED-IDFELAESDLEEEFFRSGGAGGQNVNKVS 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVR+ H PTG++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E A E K+ +G Sbjct: 240 TAVRLVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--AAYAEQRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + V++G+L + + A + Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELGEVIDALI 343 >gi|21910335|ref|NP_664603.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS315] gi|28895910|ref|NP_802260.1| peptide chain release factor 1 [Streptococcus pyogenes SSI-1] gi|25091126|sp|Q8K7I2|RF1_STRP3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21904531|gb|AAM79406.1| putative peptide chain release factor 1 [Streptococcus pyogenes MGAS315] gi|28811160|dbj|BAC64093.1| putative peptide chain release factor 1 [Streptococcus pyogenes SSI-1] Length = 359 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 143/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E +I D RID Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYDIDPKDLRIDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDTILSGKMDEVIDA 344 >gi|218514632|ref|ZP_03511472.1| peptide chain release factor 1 [Rhizobium etli 8C-3] Length = 236 Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 128/209 (61%), Gaps = 8/209 (3%) Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 K+ +K E L +GE G K I G + LK E GVHR+ R+ ++ R HTS Sbjct: 19 KKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSA 78 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +++ V P ++ I+IEI D RIDT R+SGAGGQHVNTTDSAVRITH+P+G+VV E Sbjct: 79 ATVAVLPEAEE-IDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVV-TSSE 136 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323 +SQH+N+A+A +LR++LY+ E Q+ + + K+++G G +IR+Y P V Sbjct: 137 KSQHQNRAKAMQVLRSRLYDAERQRAD--SERSADRKSQVGSGDRSERIRTYNF-PQGRV 193 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R N+ +++G++++ + A +A Sbjct: 194 TDHRINLTLYKLDRMMEGEIEEVVDALMA 222 >gi|327267784|ref|XP_003218679.1| PREDICTED: peptide chain release factor 1, mitochondrial-like [Anolis carolinensis] Length = 443 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 114/311 (36%), Positives = 163/311 (52%), Gaps = 32/311 (10%) Query: 60 KEIQD--RLCDNL------ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 KE+QD LC L LLELA+EE ++ Q+I+ E+ K F+ L+ + Sbjct: 123 KEMQDLEALCAKLNSSEEKALLELAIEEK--GVID------QKIR-ELYQKLFQILIPRD 173 Query: 112 A-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 D D LEV +G GG Q + + MY +A+ + + E + E G+ A Sbjct: 174 KYDECDVLLEVTSGRTTGGDICQQFTKEVFDMYQNYADYKCWTFEIRKYTPSEYGGLHHA 233 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISE 225 I G + Y LK E G+HR+ RI +SR HT S+ V P +++ I I++ Sbjct: 234 AAYISGDDVYRHLKYEGGIHRVQRIPETGLSSRMQRIHTGTMSVIVLPQLEE-INIKVDP 292 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDT+RA GAGGQHVNTTDSAVRI HIPTG+ V+CQQERSQ N+ +A L+ KLY Sbjct: 293 KDLRIDTFRAKGAGGQHVNTTDSAVRIVHIPTGITVECQQERSQQVNREKAMQALKDKLY 352 Query: 286 ELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + +++ E++ + K ++G Q IR+Y V D R + E +L G Sbjct: 353 QQAIER--ELSQKQSARKMQLGTRSQSERIRTYNFNQ-DRVSDHRISYEVRDIKGILSGK 409 Query: 343 --LDDFMKATL 351 LD+ + L Sbjct: 410 GVLDELINKLL 420 >gi|326510949|dbj|BAJ91822.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 411 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 129/215 (60%), Gaps = 12/215 (5%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S +S + LEV AG GG E+ WA L+RMY R+ E +K + + + E+ G K Sbjct: 150 LPSDPLNSRNILLEVRAGTGGDEAGIWAGDLVRMYQRYCELNNWKFKPVSCSEAEKGGFK 209 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 + + +KG Y LK E GVHR+ R+ ++ R HTS +++ + P D+ +++ I Sbjct: 210 TYVMEVKGKQVYSKLKFESGVHRVQRVPQTETMGRVHTSTATVAIMPEADE-VDVVIDPK 268 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D + R+ GAGGQ+VN ++A+ + H PTG+ + C +ERSQ +NK +A+ +LRAKLYE Sbjct: 269 DIELKAARSGGAGGQNVNKVETAIDLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYE 328 Query: 287 LELQKREE------IANIGESSKTEIGWGRQIRSY 315 ++L++++E + +G +++E +IR+Y Sbjct: 329 IKLREQQESIRTQRLLQVGTGARSE-----KIRTY 358 >gi|315304796|ref|ZP_07874958.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596] gi|313626836|gb|EFR95807.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596] Length = 229 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 132/220 (60%), Gaps = 11/220 (5%) Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 + RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ R+ Sbjct: 1 MFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQRVPET 60 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ + P ++ +EIE+ + D R DT+ ++GAGGQ VNTT SAVR+THIP Sbjct: 61 ESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNTTMSAVRLTHIP 119 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSKTEIGWG---RQ 311 TG+VV Q ERSQ KNK +A +LRA++Y+ E + REE AN K+ +G G + Sbjct: 120 TGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RKSAVGTGDRSER 175 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P V D R + +++G LD+ + A + Sbjct: 176 IRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 214 >gi|116072171|ref|ZP_01469439.1| peptide chain release factor 1 [Synechococcus sp. BL107] gi|116065794|gb|EAU71552.1| peptide chain release factor 1 [Synechococcus sp. BL107] Length = 365 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 109/339 (32%), Positives = 173/339 (51%), Gaps = 21/339 (6%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + DP + + + + RER L+ + + +Q + + EL E + + Sbjct: 20 LERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLEQEQVDARELLRESRSDAAM 79 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEA------DSNDAYLEVHAGAGGTESQDWANMLLR 139 QE + N + +LE ++ L+ D LE+ AGAGG E+ WA L R Sbjct: 80 QELAQN-ELCELEAQHAALLQRLTLALLPRDPRDDRSVMLEIRAGAGGDEACIWAGDLAR 138 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ +K + + L + + G + + +KG + + LK E GVHR+ R+ +S Sbjct: 139 MYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGASVFSQLKFEAGVHRVQRVPATESQ 198 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ V P D ++E+++ D I T R+ GAGGQ+VN ++AV + H PTG+ Sbjct: 199 GRVHTSTATVAVMPEAD-AVEVQLDPKDLEISTARSGGAGGQNVNKVETAVDLLHKPTGI 257 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEIGWGRQIRSYVL 317 V C Q+RSQ +N+ +A +LRAKL E EL E ESS ++++G G RS + Sbjct: 258 RVFCTQQRSQLQNRERALEILRAKLLERELAAAAE----RESSDRRSQVGSGD--RSEKI 311 Query: 318 QPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMKATLA 352 + Y KD RT + S VL G L+D + A +A Sbjct: 312 RTYNY-KDNRTTDHRLGRNFSLEPVLQGQLEDLIGACIA 349 >gi|297739884|emb|CBI30066.3| unnamed protein product [Vitis vinifera] Length = 414 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 145/264 (54%), Gaps = 25/264 (9%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + LL G+ D A L + AG G S+ WA LL MYT+WAEK+ +K +E + + Sbjct: 159 EMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAEQLLSMYTKWAEKQGYKGRVVEKYASKN 218 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPV-VDDSIE 220 GIKSAT+ + YG+L GE+GVH ++R S D S H + S++ V P+ ++ + + Sbjct: 219 GGIKSATIEFESEYGYGYLSGERGVHHMIRSS--DDESILHETGSAVVDVIPLFLETAPD 276 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++I + D RI + G T AV I HIPTG+ VQ ERS NK +A N L Sbjct: 277 LQIDDGDLRISSPSCHGV---EQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRL 333 Query: 281 RAKLYELELQ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 +AKL ++ KRE IA++ W ++ R YV P ++V+D++T+I+ Sbjct: 334 KAKLVVTAMEQGIPEVGGIKREAIADM---------WKQETRRYVFHPNKLVQDVKTDIQ 384 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 + VLDG+++ + A +++++ Sbjct: 385 LPDLNSVLDGNIEPLIGANISMRQ 408 >gi|225441347|ref|XP_002274658.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 417 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 91/264 (34%), Positives = 145/264 (54%), Gaps = 25/264 (9%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + LL G+ D A L + AG G S+ WA LL MYT+WAEK+ +K +E + + Sbjct: 162 EMSKLLRGQFDMEGACLTIKAGPRGIYSEIWAEQLLSMYTKWAEKQGYKGRVVEKYASKN 221 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPV-VDDSIE 220 GIKSAT+ + YG+L GE+GVH ++R S D S H + S++ V P+ ++ + + Sbjct: 222 GGIKSATIEFESEYGYGYLSGERGVHHMIRSS--DDESILHETGSAVVDVIPLFLETAPD 279 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++I + D RI + G T AV I HIPTG+ VQ ERS NK +A N L Sbjct: 280 LQIDDGDLRISSPSCHGV---EQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRL 336 Query: 281 RAKLYELELQ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 +AKL ++ KRE IA++ W ++ R YV P ++V+D++T+I+ Sbjct: 337 KAKLVVTAMEQGIPEVGGIKREAIADM---------WKQETRRYVFHPNKLVQDVKTDIQ 387 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 + VLDG+++ + A +++++ Sbjct: 388 LPDLNSVLDGNIEPLIGANISMRQ 411 >gi|322517017|ref|ZP_08069906.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC 49124] gi|322124434|gb|EFX95931.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC 49124] Length = 359 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 104/320 (32%), Positives = 168/320 (52%), Gaps = 25/320 (7%) Query: 38 NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97 N E + RE + + +IS +E+ + L E+A EE L+E+ + Sbjct: 42 NTRETVTVYREYKQVIQSISDAEEMIKEASGDPDLEEMAKEE-----LKESKAAKE---- 92 Query: 98 EVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ + Sbjct: 93 --EYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLAMYQKYAETQGWRFDV 150 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P Sbjct: 151 MEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPE 210 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 V++ +E EI D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ Sbjct: 211 VEE-VEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRD 269 Query: 275 QAWNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329 +A ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R Sbjct: 270 KAMKIIRARVADHFAQIAQDEQDAE----RKSTVGTGDRSERIRTYNF-PQNRVTDHRIG 324 Query: 330 IEKTSPSDVLDGDLDDFMKA 349 + +L G +D+ + A Sbjct: 325 LTLQKLDTILAGKMDEVIDA 344 >gi|78185551|ref|YP_377985.1| peptide chain release factor 1 [Synechococcus sp. CC9902] gi|119361629|sp|Q3AW64|RF1_SYNS9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78169845|gb|ABB26942.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus sp. CC9902] Length = 365 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/246 (37%), Positives = 137/246 (55%), Gaps = 14/246 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D LE+ AGAGG E+ WA L RMY R+ +K + + L + + G + + + Sbjct: 112 DDRSVMLEIRAGAGGDEACIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG + + LK E GVHR+ R+ +S R HTS +++ V P D ++E+E+ D I T Sbjct: 172 KGTSVFSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-AVEVELDPKDLEIST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C Q+RSQ +N+ +A +LRAKL E EL Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERALEILRAKLLERELAAA 290 Query: 293 EEIANIGESS--KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDF 346 E ESS ++++G G RS ++ Y KD RT + S VL G L+D Sbjct: 291 AE----RESSHRRSQVGSGD--RSEKIRTYNY-KDNRTTDHRLGRNFSLEPVLQGQLEDL 343 Query: 347 MKATLA 352 + A +A Sbjct: 344 IGACIA 349 >gi|19746088|ref|NP_607224.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS8232] gi|24418636|sp|Q8P125|RF1_STRP8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|19748260|gb|AAL97723.1| putative peptide chain release factor 1 [Streptococcus pyogenes MGAS8232] Length = 359 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 144/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E +I + D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYDIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDIILSGKMDEVIDA 344 >gi|56808656|ref|ZP_00366381.1| COG0216: Protein chain release factor A [Streptococcus pyogenes M49 591] gi|71903502|ref|YP_280305.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS6180] gi|71910676|ref|YP_282226.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS5005] gi|209559423|ref|YP_002285895.1| peptide chain release factor 1 [Streptococcus pyogenes NZ131] gi|119361623|sp|Q48TL0|RF1_STRPM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238054473|sp|B5XLI8|RF1_STRPZ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71802597|gb|AAX71950.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes MGAS6180] gi|71853458|gb|AAZ51481.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes MGAS5005] gi|209540624|gb|ACI61200.1| Peptide chain release factor 1 [Streptococcus pyogenes NZ131] Length = 359 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 143/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E +I D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYDIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDTILSGKMDEVIDA 344 >gi|15675118|ref|NP_269292.1| peptide chain release factor 1 [Streptococcus pyogenes M1 GAS] gi|20139346|sp|Q99ZP5|RF1_STRP1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|13622277|gb|AAK34013.1| putative peptide chain release factor 1 [Streptococcus pyogenes M1 GAS] Length = 359 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 143/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E +I D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYDIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDTILSGKMDEVIDA 344 >gi|331657262|ref|ZP_08358224.1| peptide chain release factor 1 [Escherichia coli TA206] gi|331055510|gb|EGI27519.1| peptide chain release factor 1 [Escherichia coli TA206] Length = 323 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 73/161 (45%), Positives = 102/161 (63%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D RIDT Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDT 226 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +R+SGAGGQHVNTTDSA+RITH+PTG+++ + K K Sbjct: 227 FRSSGAGGQHVNTTDSAIRITHLPTGLLLNVRTNVHNIKTK 267 >gi|169833220|ref|YP_001694464.1| peptide chain release factor 1 [Streptococcus pneumoniae Hungary19A-6] gi|238688292|sp|B1IBH9|RF1_STRPI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|168995722|gb|ACA36334.1| peptide chain release factor 1 [Streptococcus pneumoniae Hungary19A-6] Length = 359 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ M Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVM 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|115403013|ref|XP_001217583.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114189429|gb|EAU31129.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 447 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 85/218 (38%), Positives = 121/218 (55%), Gaps = 21/218 (9%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG---IKSATLLIKGP 175 LE+ GAGG E+ +A LLRMYT + +R F++ +++ + AG + A L ++ Sbjct: 148 LEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSSVIKLDVADGAGDDRLTEAILEVEAN 207 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-------IEIEISESDC 228 AY L+ E GVHR+ R+ +S R HTS S+ V P DS + ++ SD Sbjct: 208 GAYDVLRTESGVHRVQRVPATESKGRTHTSAVSVMVLPSFPDSGAGSDSALNVDDPNSDY 267 Query: 229 RIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 +D RA GAGGQHVN T+SA+R+THIPTG+VV Q RSQH N+ +AW +LR Sbjct: 268 YVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQILR 327 Query: 282 AKLYELELQKRE----EIANIGESSKTEIGWGRQIRSY 315 A+L E + RE E+ +G G +IR+Y Sbjct: 328 ARLAEARQEAREQELVELRRGVMGGVARMGRGDKIRTY 365 >gi|219119372|ref|XP_002180448.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407921|gb|EEC47856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 358 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 164/299 (54%), Gaps = 13/299 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLELALEEDDC 82 L + DP + + + +M +R ++ + +E +Q+ L L + A DD Sbjct: 15 LTERLADPDVINDSNLLRQVMTDRSQIEEVVMVFEEYVALQEELSGAKELFQDA--GDDP 72 Query: 83 SILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLL 138 + + D ++ I+ +++ ++ +L D NDA LE+ AG GG+E+ +A LL Sbjct: 73 DMKEMARDEMKAIEPQLDSLEEKIKVLLLPKDPNDARNVMLEIRAGTGGSEANIFAGDLL 132 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 +Y ++ + +++ ++ G++ G K+ L IKG Y LK E GVHR+ R+ +S Sbjct: 133 DVYRKYISTQGWQSNLIDSSSGDDGGYKNVVLDIKGDMVYSKLKWEAGVHRVQRVPATES 192 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS +++ + P D+ ++I+I + + T R+ GAGGQ+VN ++AV + H PTG Sbjct: 193 QGRVHTSTATVAIMPECDE-VDIKIDPKEIEMSTMRSGGAGGQNVNKVETAVDLLHKPTG 251 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR--EEIANIGESSKTEIGWGRQIRSY 315 + ++C QERSQ KNK A ML AKLY++E +KR EE A G T G +IR+Y Sbjct: 252 IRIKCTQERSQLKNKELAMKMLMAKLYDMENEKREMEERARRGSQVGTG-GRSEKIRTY 309 >gi|254572401|ref|XP_002493310.1| hypothetical protein [Pichia pastoris GS115] gi|238033108|emb|CAY71131.1| hypothetical protein PAS_chr3_1249 [Pichia pastoris GS115] gi|328352673|emb|CCA39071.1| Peptide chain release factor 1 [Pichia pastoris CBS 7435] Length = 405 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/213 (38%), Positives = 127/213 (59%), Gaps = 7/213 (3%) Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +L+E+ S L + + L+R+ +++ K L E LE+ G GG+E+ + Sbjct: 105 SLKEEIESELTQAAPKLKRLTSKLKTKL---LPPHEFADKPCILELRPGIGGSEANLFTE 161 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY ++A+ ++ E + + G+ A ++I P +Y L+ E GVHR+ R+ Sbjct: 162 DLLSMYEKYAQHHRWSYEIISRNPHPSGNGLVDAAIVINEPGSYNRLRFEAGVHRVQRVP 221 Query: 195 PYDSNSRRHTSFSSIWVYPVVDD---SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 +S R HTS +++ V P +D+ S+ D RID RASG+GGQHVNTT+SAVR Sbjct: 222 ATESKGRTHTSTAAVVVLPKIDEDDTSLNRTFLPDDIRIDVMRASGSGGQHVNTTESAVR 281 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +THIP+G+VV Q ERSQHKNKA+A +L+A+L Sbjct: 282 VTHIPSGIVVLIQDERSQHKNKAKALTILKARL 314 >gi|190348057|gb|EDK40443.2| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC 6260] Length = 421 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 139/256 (54%), Gaps = 17/256 (6%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLS 109 LDN +++++++ L E+ EE D + QE LQ + V+ K ++ L Sbjct: 98 LDNYHRYVQDMENVAA----LKEMIAEETDPEMQQEAIKELQHLVPNVQRSVKVLQARLL 153 Query: 110 GEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 +D LE+ G GG+E+ + L+ MY +A +K+K + + Sbjct: 154 PPVSHSDKATILELRPGVGGSEAALFCGDLVNMYINFANNKKWKWTKISEGLTNSGSLNE 213 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI------ 221 + I P +Y L+ E GVHR+ RI ++ R HTS +++ V P + + E Sbjct: 214 VIMSIDVPGSYNLLRHESGVHRVQRIPATETKGRIHTSTAAVVVLPKISEGTESSLKDDE 273 Query: 222 -EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + + + RIDT RA G GGQHVNTTDSAVR+THIPTG+ VQ Q ERSQ KNKA+A+++L Sbjct: 274 RQFAPGEVRIDTMRAGGKGGQHVNTTDSAVRLTHIPTGIQVQQQDERSQPKNKAKAFSIL 333 Query: 281 RAKLYELELQKREEIA 296 RA+L LE K EIA Sbjct: 334 RARLAALERDK--EIA 347 >gi|260792424|ref|XP_002591215.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae] gi|229276418|gb|EEN47226.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae] Length = 353 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 2/180 (1%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD ND LEV AG GG E+ + + + MY ++A + + + L + G++ AT Sbjct: 89 EADENDIILEVVAGVGGQEAMLFTSDMFEMYCQYAAYKNWHMQVLTMDTSTLGGLRHATA 148 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 IKG NAY LK E GVHR+ R+ + R HTS ++ V P + I+ +S+ +I Sbjct: 149 SIKGLNAYKLLKLEAGVHRVQRVPKTEKAGRVHTSTMTVAVLPQPKE-IDNTWDKSEFKI 207 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGV-VVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T +ASGAGGQHVN T+SAVRI HIPTG V+CQQERSQ +N+A A ++A+LY+++L Sbjct: 208 ETKKASGAGGQHVNKTESAVRIVHIPTGENAVECQQERSQLRNRAIAMTTIQARLYQMKL 267 >gi|73989052|ref|XP_542584.2| PREDICTED: similar to mitochondrial translational release factor 1 isoform 1 [Canis familiaris] Length = 456 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 116/330 (35%), Positives = 166/330 (50%), Gaps = 49/330 (14%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQ---------DRLCDNLI------LLELALE 78 HL N + K L R L + +EIQ D +C +L L ELALE Sbjct: 94 HLSVNEGDRKSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALE 153 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWA 134 E Q ++ K+ V Y + F+SL+ E D ND +EV +G GG Q + Sbjct: 154 ER-----QTIAE-----KINVLYSELFQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFT 203 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA------------GIKSATLLIKGPNAYGWLK 182 + MY ++ + +K E L + G+ A I G N Y LK Sbjct: 204 REIFDMYQNYSSYKNWKFELLNYTPADYGSDLKPCGFVIVGGLHHAAARISGDNVYKHLK 263 Query: 183 GEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 E GVHR+ RI ++R HT S+ V P D+ +++++ D RIDT+RA GAG Sbjct: 264 YEGGVHRVQRIPEVGLSARMQRIHTGTMSVIVLPQPDE-VDVKVDPKDLRIDTFRAKGAG 322 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK A +LRA+LY+ ++K + Sbjct: 323 GQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKDK----CQ 378 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + S ++ G + +S ++ Y +D T+ Sbjct: 379 QQSTRKLQVGTRAQSERIRTYNFTQDRVTD 408 >gi|260171648|ref|ZP_05758060.1| peptide chain release factor 1 [Bacteroides sp. D2] gi|299148543|ref|ZP_07041605.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23] gi|315919960|ref|ZP_07916200.1| peptide chain release factor 1 [Bacteroides sp. D2] gi|298513304|gb|EFI37191.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23] gi|313693835|gb|EFS30670.1| peptide chain release factor 1 [Bacteroides sp. D2] Length = 370 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 109/345 (31%), Positives = 174/345 (50%), Gaps = 21/345 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D V R ++T DP + + L +E + LD+ + KE L + + Sbjct: 12 DGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNIL 71 Query: 77 LEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131 E D + +E DN Q +L V ++ + +L + DS +A LE+ GAGG E+ Sbjct: 72 ANESDAEMREMAKEEMDNSQE-RLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I TG ++++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 T + G +IR+Y P + D R N + + +DGD+ D Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351 >gi|225870517|ref|YP_002746464.1| peptide chain release factor 1 [Streptococcus equi subsp. equi 4047] gi|254790898|sp|C0MC15|RF1_STRE4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225699921|emb|CAW93851.1| peptide chain release factor 1 [Streptococcus equi subsp. equi 4047] Length = 360 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D RID Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRIDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDAE----RKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEIV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|315222986|ref|ZP_07864865.1| peptide chain release factor 1 [Streptococcus anginosus F0211] gi|315187936|gb|EFU21672.1| peptide chain release factor 1 [Streptococcus anginosus F0211] Length = 359 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + +K E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D RID Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRIDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEIV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|319939134|ref|ZP_08013498.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV] gi|319812184|gb|EFW08450.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV] Length = 359 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + +K E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D RID Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRIDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEIV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|146415684|ref|XP_001483812.1| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC 6260] Length = 421 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/257 (37%), Positives = 142/257 (55%), Gaps = 19/257 (7%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE--YKQFESLLS 109 LDN +++++++ L E+ EE D + QE LQ + V+ K ++ L Sbjct: 98 LDNYHRYVQDMENVAA----LKEMIAEETDPEMQQEAIKELQHLVPNVQRSVKVLQARLL 153 Query: 110 GEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK-TEALEIHDGEEAGIK 166 +D LE+ G GG+E+ + L+ MY +A +K+K T+ LE + Sbjct: 154 PPVSHSDKATILELRPGVGGSEAALFCGDLVNMYINFANNKKWKWTKILE-GLTNSGSLN 212 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI----- 221 + I P +Y L+ E GVHR+ RI ++ R HTS +++ V P + + E Sbjct: 213 EVIMSIDVPGSYNLLRHESGVHRVQRIPATETKGRIHTSTAAVVVLPKISEGTESSLKDD 272 Query: 222 --EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + + + RIDT RA G GGQHVNTTDSAVR+THIPTG+ VQ Q ERSQ KNKA+A+++ Sbjct: 273 ERQFAPGEVRIDTMRAGGKGGQHVNTTDSAVRLTHIPTGIQVQQQDERSQPKNKAKAFSI 332 Query: 280 LRAKLYELELQKREEIA 296 LRA+L LE K EIA Sbjct: 333 LRARLAALERDK--EIA 347 >gi|283782510|ref|YP_003373265.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068] gi|283440963|gb|ADB19405.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068] Length = 358 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 85/236 (36%), Positives = 131/236 (55%), Gaps = 7/236 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 +A + +E+ AG GG E +A L +MY R+ EK+ +K E +E + G K L Sbjct: 103 DAQRSRCVMEIRAGVGGAEGALFAQDLYQMYKRFGEKKGWKVELMEASPTDMGGFKEVIL 162 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 +G + L+ E G HR+ R+ ++ R HTS +++ V P +D +E+ I + R+ Sbjct: 163 GFEGEGVFRELQYESGGHRVQRVPETEAKGRVHTSAATVAVLPEPED-VEVNIKPDEYRL 221 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D + ASG GGQHVN T+SAVR+TH TG+VV Q E+SQHKN A+A +L+++LY+ Q Sbjct: 222 DKFCASGPGGQHVNKTESAVRLTHYETGIVVSMQDEKSQHKNLAKALRILKSRLYDFYRQ 281 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 + E A K+ +G G +IR+Y P D R + +++GDL Sbjct: 282 R--EQAKRAAERKSLVGSGDRSERIRTYNF-PENRCTDHRIGLTLYKLDQIINGDL 334 >gi|195978153|ref|YP_002123397.1| peptide chain release factor 1 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225868513|ref|YP_002744461.1| peptide chain release factor 1 [Streptococcus equi subsp. zooepidemicus] gi|238689817|sp|B4U317|RF1_STREM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|259585255|sp|C0MF07|RF1_STRS7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|195974858|gb|ACG62384.1| peptide chain release factor 1 PrfA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225701789|emb|CAW99200.1| peptide chain release factor 1 [Streptococcus equi subsp. zooepidemicus] Length = 360 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D RID Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRIDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDAE----RKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEIV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|152965225|ref|YP_001361009.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216] gi|189039977|sp|A6W7F6|RF1_KINRD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151359742|gb|ABS02745.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216] Length = 355 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 105/267 (39%), Positives = 152/267 (56%), Gaps = 9/267 (3%) Query: 92 LQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 LQR E K LL + D S D LE+ AG GG ES +A LLRMY R+AE+ + Sbjct: 78 LQRAAEEAGEKLRRLLLPRDPDDSRDVILEIKAGEGGEESALFAGDLLRMYLRYAERHGW 137 Query: 151 KTEALEIHDGEEAGIKSATLLIK--GPNAYG-W--LKGEQGVHRLVRISPYDSNSRRHTS 205 TE L+ + + G K ++ +K G A G W LK E GVHR+ R+ +S R HTS Sbjct: 138 VTEVLDANPSDLGGYKDVSVAVKTRGAAAEGVWHRLKYEGGVHRVQRVPVTESQGRVHTS 197 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 + V + +E+ + +D R+D +R+SG GGQ VNTTDSAVRITH+PTGVV CQ Sbjct: 198 AVGVLVV-PEAEEVEVAVDPNDLRVDVFRSSGPGGQSVNTTDSAVRITHLPTGVVATCQN 256 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVK 324 E+SQ +N+ QA +LRA+L+ L + + A+ S+ + ++R+Y + + Sbjct: 257 EKSQLQNREQAMRILRARLHALAQEAADAQASAARRSQVRTVDRSERVRTYNYGENR-IA 315 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D RT + + VLDGDLD +++ + Sbjct: 316 DHRTGFKAYNLDTVLDGDLDPVIQSAI 342 >gi|207109871|ref|ZP_03244033.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1] Length = 130 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 74/118 (62%), Positives = 92/118 (77%) Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVR Sbjct: 1 WASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVR 60 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 ISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN + + Sbjct: 61 ISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKQKAVI 118 >gi|160887043|ref|ZP_02068046.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483] gi|237715527|ref|ZP_04546008.1| peptide chain release factor 1 [Bacteroides sp. D1] gi|262408537|ref|ZP_06085083.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22] gi|293369398|ref|ZP_06615983.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f] gi|294646503|ref|ZP_06724140.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a] gi|294807531|ref|ZP_06766328.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b] gi|298482182|ref|ZP_07000370.1| peptide chain release factor 1 [Bacteroides sp. D22] gi|156107454|gb|EDO09199.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483] gi|229444236|gb|EEO50027.1| peptide chain release factor 1 [Bacteroides sp. D1] gi|262353402|gb|EEZ02496.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22] gi|292635565|gb|EFF54072.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f] gi|292638122|gb|EFF56503.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a] gi|294445232|gb|EFG13902.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b] gi|295086791|emb|CBK68314.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides xylanisolvens XB1A] gi|298271739|gb|EFI13312.1| peptide chain release factor 1 [Bacteroides sp. D22] Length = 370 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 109/345 (31%), Positives = 174/345 (50%), Gaps = 21/345 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D V R ++T DP + + L +E + LD+ + KE L + + Sbjct: 12 DGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNIL 71 Query: 77 LEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131 E D + +E DN Q +L V ++ + +L + DS +A LE+ GAGG E+ Sbjct: 72 ANESDAEMREMAKEEMDNSQE-RLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEIVCSVTGDNVYGILKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I TG ++++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 T + G +IR+Y P + D R N + + +DGD+ D Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351 >gi|146318502|ref|YP_001198214.1| peptide chain release factor 1 [Streptococcus suis 05ZYH33] gi|146320693|ref|YP_001200404.1| peptide chain release factor 1 [Streptococcus suis 98HAH33] gi|145689308|gb|ABP89814.1| Protein chain release factor A [Streptococcus suis 05ZYH33] gi|145691499|gb|ABP92004.1| Protein chain release factor A [Streptococcus suis 98HAH33] gi|292558283|gb|ADE31284.1| Peptide chain release factor 1 [Streptococcus suis GZ1] Length = 364 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 106/352 (30%), Positives = 181/352 (51%), Gaps = 19/352 (5%) Query: 10 LGGLFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 L ++D AV+ R L DP + + L +E + ++ +E + + Sbjct: 5 LMNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYK-TVLQ 63 Query: 69 NLILLELALEED--DCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVH 122 N++ E ++E D + + + L++ K + E Y++ +L D ND LE+ Sbjct: 64 NIVDAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIR 123 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+ +A LL MY ++AE + ++ E +E GIK ++ G + Y LK Sbjct: 124 GAAGGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLK 183 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S R HTS +++ + P V++ +E +I D R+D Y ASGAGGQ+ Sbjct: 184 YESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDIYHASGAGGQN 242 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGE 300 VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ + E+ A Sbjct: 243 VNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDA---- 298 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K+ IG G +IR+Y P V D R + +L G +D+ + A Sbjct: 299 ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDA 349 >gi|56203458|emb|CAI18897.1| mitochondrial translational release factor 1-like [Homo sapiens] Length = 231 Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 91/200 (45%), Positives = 118/200 (59%), Gaps = 9/200 (4%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 18 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 77 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK Sbjct: 78 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKE 136 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIE 331 A LRAKLY + L+ EEI + K +IG GR +IR+Y P V D R N Sbjct: 137 LAMTKLRAKLYSMHLE--EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKT 193 Query: 332 KTSPSDVLDGD--LDDFMKA 349 + GD LD+ +++ Sbjct: 194 LHDLETFMQGDYLLDELVQS 213 >gi|223932122|ref|ZP_03624126.1| peptide chain release factor 1 [Streptococcus suis 89/1591] gi|302023743|ref|ZP_07248954.1| peptide chain release factor 1 [Streptococcus suis 05HAS68] gi|330832776|ref|YP_004401601.1| peptide chain release factor 1 [Streptococcus suis ST3] gi|223899103|gb|EEF65460.1| peptide chain release factor 1 [Streptococcus suis 89/1591] gi|329306999|gb|AEB81415.1| peptide chain release factor 1 [Streptococcus suis ST3] Length = 359 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 105/349 (30%), Positives = 180/349 (51%), Gaps = 19/349 (5%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 ++D AV+ R L DP + + L +E + ++ +E + + N++ Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATRDTVTAYREYK-TVLQNMV 61 Query: 72 LLELALEED--DCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGA 125 E ++E D + + + L++ K + E Y++ +L D ND LE+ A Sbjct: 62 DAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAA 121 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E Sbjct: 122 GGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYES 181 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ + P V++ +E +I D R+D Y ASGAGGQ+VN Sbjct: 182 GAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDIYHASGAGGQNVNK 240 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESSK 303 +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ + E+ A K Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDA----ERK 296 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + IG G +IR+Y P V D R + +L G +D+ + A Sbjct: 297 STIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDA 344 >gi|253751628|ref|YP_003024769.1| peptide chain release factor 1 [Streptococcus suis SC84] gi|253753530|ref|YP_003026671.1| peptide chain release factor 1 [Streptococcus suis P1/7] gi|253755645|ref|YP_003028785.1| peptide chain release factor 1 [Streptococcus suis BM407] gi|251815917|emb|CAZ51531.1| peptide chain release factor 1 [Streptococcus suis SC84] gi|251818109|emb|CAZ55903.1| peptide chain release factor 1 [Streptococcus suis BM407] gi|251819776|emb|CAR45680.1| peptide chain release factor 1 [Streptococcus suis P1/7] gi|319758066|gb|ADV70008.1| peptide chain release factor 1 [Streptococcus suis JS14] Length = 359 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 105/349 (30%), Positives = 180/349 (51%), Gaps = 19/349 (5%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 ++D AV+ R L DP + + L +E + ++ +E + + N++ Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYK-TVLQNIV 61 Query: 72 LLELALEED--DCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSND---AYLEVHAGA 125 E ++E D + + + L++ K + E Y++ +L D ND LE+ A Sbjct: 62 DAEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAA 121 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E Sbjct: 122 GGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYES 181 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ + P V++ +E +I D R+D Y ASGAGGQ+VN Sbjct: 182 GAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDIYHASGAGGQNVNK 240 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQKREEIANIGESSK 303 +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ + E+ A K Sbjct: 241 VATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDA----ERK 296 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + IG G +IR+Y P V D R + +L G +D+ + A Sbjct: 297 STIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDA 344 >gi|50914205|ref|YP_060177.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10394] gi|61214586|sp|Q5XC69|RF1_STRP6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|50903279|gb|AAT86994.1| Bacterial Peptide Chain Release Factor 1 [Streptococcus pyogenes MGAS10394] Length = 359 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 143/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E +I D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYDIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y P V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +++ + A Sbjct: 327 LQKLDTILSGKMNEVIDA 344 >gi|331242267|ref|XP_003333780.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309312770|gb|EFP89361.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 416 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 87/243 (35%), Positives = 142/243 (58%), Gaps = 15/243 (6%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH---DGE-EAGIK 166 E+ A +E+ G GG E+ +A +L+ +YTR A ++++ + + + G+ + G++ Sbjct: 144 ESYDQSALVEIKPGVGGVEASHFATLLMNLYTRLATRKRWHIKPVSVEYMTSGQGQDGLR 203 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE- 225 A L I+G YG L+ E GVHR+ R+ + + HTS +S+ V P+ E SE Sbjct: 204 EAVLEIEGQAVYGSLRWEAGVHRVQRVPVMQNTASIHTSTASVIVLPLNPSGSEENESED 263 Query: 226 ----SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 D +++T R+ GAGGQHVN T+SAVR+THIPTG VV Q RSQH+N+ +A+ +LR Sbjct: 264 LFDEKDIKLETMRSQGAGGQHVNKTESAVRLTHIPTGTVVSMQDSRSQHQNRERAYMILR 323 Query: 282 AKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 A+L +L+L R+++ ES +++ +IR+Y Q + V D R + +D+ Sbjct: 324 ARLLDLKL--RQKVIENRESRLSQVKNTNRSEKIRTYNFQQGR-VTDHRIGLTLPRLNDI 380 Query: 339 LDG 341 +DG Sbjct: 381 IDG 383 >gi|237721316|ref|ZP_04551797.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4] gi|229449112|gb|EEO54903.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4] Length = 370 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 109/345 (31%), Positives = 173/345 (50%), Gaps = 21/345 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D V R +T DP + + L +E + LD+ + KE L + + Sbjct: 12 DGLVARFEETSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNIL 71 Query: 77 LEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131 E D + +E DN Q +L V ++ + +L + DS +A LE+ GAGG E+ Sbjct: 72 ANESDAEMREMAKEEMDNSQE-RLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I TG ++++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 T + G +IR+Y P + D R N + + +DGD+ D Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351 >gi|15900891|ref|NP_345495.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4] gi|111658249|ref|ZP_01408941.1| hypothetical protein SpneT_02000563 [Streptococcus pneumoniae TIGR4] gi|20139341|sp|Q97R20|RF1_STRPN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|14972493|gb|AAK75135.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4] Length = 359 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|148272337|ref|YP_001221898.1| peptide chain release factor 1 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166223547|sp|A5CQ48|RF1_CLAM3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|147830267|emb|CAN01201.1| peptide chain release factor RF-1 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 359 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/248 (39%), Positives = 140/248 (56%), Gaps = 12/248 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ G GG ES +A LLRMY +AE R++KTE L + G K + I Sbjct: 100 DARDVIMEIKMGEGGAESALFAADLLRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAI 159 Query: 173 KG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG P W LK E GVHR+ R+ +S R HTS + + V P V++ E+ I + Sbjct: 160 KGTSDDPALGVWAHLKYEGGVHRVQRVPATESQGRIHTSAAGVLVIPEVEEVEEVAIDPN 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ +LRA++ Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARV-- 277 Query: 287 LELQKRE---EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L Q+ E E + + S + +IR+Y P + D RT + + V+DG L Sbjct: 278 LAKQQEEIDAEASAVRRSQIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVMDGAL 336 Query: 344 DDFMKATL 351 D +++ + Sbjct: 337 DPVVESCI 344 >gi|301347115|ref|ZP_07227856.1| peptide chain release factor 2 [Acinetobacter baumannii AB056] gi|301512357|ref|ZP_07237594.1| peptide chain release factor 2 [Acinetobacter baumannii AB058] gi|301597511|ref|ZP_07242519.1| peptide chain release factor 2 [Acinetobacter baumannii AB059] Length = 113 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 69/110 (62%), Positives = 85/110 (77%), Gaps = 1/110 (0%) Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRAKLYELE+QKR E A E Sbjct: 1 HINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALED 60 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SK++IGWG QIRSYVL + +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 61 SKSDIGWGSQIRSYVLDDSR-IKDLRTGVENSNTGAVLDGDLDRFIEASL 109 >gi|149019616|ref|ZP_01834935.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72] gi|168483091|ref|ZP_02708043.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC1873-00] gi|147930991|gb|EDK81971.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72] gi|172043551|gb|EDT51597.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC1873-00] gi|301799986|emb|CBW32576.1| peptide chain release factor 1 [Streptococcus pneumoniae OXC141] gi|332200609|gb|EGJ14681.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41317] Length = 359 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|194477029|ref|YP_002049208.1| peptide chain release factor 1 [Paulinella chromatophora] gi|171192036|gb|ACB42998.1| peptide chain release factor 1 [Paulinella chromatophora] Length = 366 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 90/245 (36%), Positives = 136/245 (55%), Gaps = 10/245 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D LE+ +G GG E+ WA L RMY R+++ ++ +AL + E G + L I Sbjct: 112 DERSVMLEIRSGTGGGEACIWAGDLARMYERYSQSVGWQVQALSSSEAELGGFRELILAI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G Y LK E GVHR+ R+ +S R HTS +++ V P D +E+++ D I T Sbjct: 172 RGEGVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DKVEVQLDPKDIEIST 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ GAGGQ+VN ++AV + H PTG+ V C QERSQ +N+ +A +LRAKL LE Q Sbjct: 231 ARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKL--LERQLA 288 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT----SPSDVLDGDLDDFMK 348 E A + K ++G G RS ++ Y KD RT + S +L+G+L++ + Sbjct: 289 EAAAAESSARKAQVGTGD--RSEKIRTYNY-KDNRTTDHRLGQNFSLDSILNGNLEEIID 345 Query: 349 ATLAI 353 +A+ Sbjct: 346 TCIAL 350 >gi|6321295|ref|NP_011372.1| Mrf1p [Saccharomyces cerevisiae S288c] gi|400276|sp|P30775|RF1M_YEAST RecName: Full=Peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|3972|emb|CAA42932.1| mitochondrial release factor 1 [Saccharomyces cerevisiae] gi|1322722|emb|CAA96855.1| MRF1 [Saccharomyces cerevisiae] gi|1498241|emb|CAA68219.1| MRF1 [Saccharomyces cerevisiae] gi|151943668|gb|EDN61978.1| mitochondrial translation release factor [Saccharomyces cerevisiae YJM789] gi|190407089|gb|EDV10356.1| mitochondrial polypeptide chain release factor [Saccharomyces cerevisiae RM11-1a] gi|207345440|gb|EDZ72262.1| YGL143Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256272236|gb|EEU07227.1| Mrf1p [Saccharomyces cerevisiae JAY291] gi|259146366|emb|CAY79623.1| Mrf1p [Saccharomyces cerevisiae EC1118] gi|285812067|tpg|DAA07967.1| TPA: Mrf1p [Saccharomyces cerevisiae S288c] gi|323304985|gb|EGA58739.1| Mrf1p [Saccharomyces cerevisiae FostersB] Length = 413 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 8/174 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177 LE+ G GG E+ + LL MY +A RK+K + ++ E +GI A L I+ + Sbjct: 157 LELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGS 216 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRI 230 Y L+ E GVHR+ RI ++ R HTS +++ V P + D + E + R+ Sbjct: 217 YDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRV 276 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D RASG GGQHVNTTDSAVR+THIP+G+VV Q ERSQHKNKA+A+ +LRA+L Sbjct: 277 DIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARL 330 >gi|289167970|ref|YP_003446239.1| peptide chain release factor I [Streptococcus mitis B6] gi|288907537|emb|CBJ22374.1| peptide chain release factor I [Streptococcus mitis B6] Length = 359 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|15902968|ref|NP_358518.1| peptide chain release factor 1 [Streptococcus pneumoniae R6] gi|116517153|ref|YP_816384.1| peptide chain release factor 1 [Streptococcus pneumoniae D39] gi|148994243|ref|ZP_01823536.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68] gi|148998842|ref|ZP_01826278.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70] gi|149003880|ref|ZP_01828703.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69] gi|149006296|ref|ZP_01830008.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74] gi|149012959|ref|ZP_01833848.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75] gi|168488841|ref|ZP_02713040.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195] gi|168491915|ref|ZP_02716058.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC0288-04] gi|168494449|ref|ZP_02718592.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC3059-06] gi|168576251|ref|ZP_02722145.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016] gi|182683968|ref|YP_001835715.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14] gi|221231773|ref|YP_002510925.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC 700669] gi|225854521|ref|YP_002736033.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA] gi|225856675|ref|YP_002738186.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031] gi|225858811|ref|YP_002740321.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585] gi|237650077|ref|ZP_04524329.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI 1974] gi|237822154|ref|ZP_04597999.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI 1974M2] gi|303255576|ref|ZP_07341627.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455] gi|303260464|ref|ZP_07346432.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293] gi|303262821|ref|ZP_07348758.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS292] gi|303265291|ref|ZP_07351201.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397] gi|303266498|ref|ZP_07352385.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457] gi|303268383|ref|ZP_07354179.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458] gi|307067803|ref|YP_003876769.1| protein chain release factor A [Streptococcus pneumoniae AP200] gi|307127431|ref|YP_003879462.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B] gi|32171541|sp|Q8DPZ4|RF1_STRR6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|122278730|sp|Q04KR4|RF1_STRP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238691157|sp|B2IPH6|RF1_STRPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790899|sp|C1C6Z5|RF1_STRP7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790900|sp|B8ZPH1|RF1_STRPJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790902|sp|C1CE12|RF1_STRZJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790903|sp|C1CK98|RF1_STRZP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|15458532|gb|AAK99728.1| Peptide chain release factor I [Streptococcus pneumoniae R6] gi|116077729|gb|ABJ55449.1| peptide chain release factor 1 [Streptococcus pneumoniae D39] gi|147755269|gb|EDK62320.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70] gi|147758110|gb|EDK65114.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69] gi|147762073|gb|EDK69035.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74] gi|147763112|gb|EDK70053.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75] gi|147927384|gb|EDK78415.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68] gi|182629302|gb|ACB90250.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14] gi|183572574|gb|EDT93102.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195] gi|183573754|gb|EDT94282.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC0288-04] gi|183575581|gb|EDT96109.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC3059-06] gi|183577929|gb|EDT98457.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016] gi|220674233|emb|CAR68768.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC 700669] gi|225720924|gb|ACO16778.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585] gi|225723680|gb|ACO19533.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA] gi|225724367|gb|ACO20219.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031] gi|301794156|emb|CBW36566.1| peptide chain release factor 1 [Streptococcus pneumoniae INV104] gi|301801854|emb|CBW34572.1| peptide chain release factor 1 [Streptococcus pneumoniae INV200] gi|302597432|gb|EFL64527.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455] gi|302636019|gb|EFL66517.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS292] gi|302638376|gb|EFL68843.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293] gi|302642104|gb|EFL72455.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458] gi|302643949|gb|EFL74209.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457] gi|302645156|gb|EFL75393.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397] gi|306409340|gb|ADM84767.1| Protein chain release factor A [Streptococcus pneumoniae AP200] gi|306484493|gb|ADM91362.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B] gi|332073352|gb|EGI83831.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17570] gi|332075368|gb|EGI85837.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41301] gi|332075634|gb|EGI86102.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17545] gi|332202882|gb|EGJ16950.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47901] Length = 359 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|322411678|gb|EFY02586.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 359 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 135/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ + P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G +D+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEII 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|322374351|ref|ZP_08048865.1| peptide chain release factor 1 [Streptococcus sp. C300] gi|331266424|ref|YP_004326054.1| peptide chain release factor 1 [Streptococcus oralis Uo5] gi|321279851|gb|EFX56890.1| peptide chain release factor 1 [Streptococcus sp. C300] gi|326683096|emb|CBZ00714.1| peptide chain release factor 1 [Streptococcus oralis Uo5] Length = 359 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|309800291|ref|ZP_07694464.1| peptide chain release factor 1 [Streptococcus infantis SK1302] gi|308116075|gb|EFO53578.1| peptide chain release factor 1 [Streptococcus infantis SK1302] Length = 359 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|194387338|dbj|BAG60033.1| unnamed protein product [Homo sapiens] Length = 344 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 100/246 (40%), Positives = 126/246 (51%), Gaps = 45/246 (18%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG G++ A Sbjct: 121 SEETDENDLILEVTAGVGG------------------------------------GLRHA 144 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 145 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 203 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + Sbjct: 204 RIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMH 263 Query: 289 LQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343 L+ EEI + K +IG GR +IR+Y P V D R N + GD L Sbjct: 264 LE--EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLL 320 Query: 344 DDFMKA 349 D+ +++ Sbjct: 321 DELVQS 326 >gi|116075738|ref|ZP_01472997.1| peptide chain release factor 1 [Synechococcus sp. RS9916] gi|116067053|gb|EAU72808.1| peptide chain release factor 1 [Synechococcus sp. RS9916] Length = 364 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 89/252 (35%), Positives = 137/252 (54%), Gaps = 14/252 (5%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S D LE+ AGAGG E+ WA L RMY R+ ++ + + + + + G + Sbjct: 106 LPSDPRDERSVMLEIRAGAGGDEACLWAGDLARMYERYGSRQGWNVQPVSANAADLGGYR 165 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 L +KG + LK E GVHR+ R+ +S R HTS +++ V P D +E++I + Sbjct: 166 ELILSVKGDAVFSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEAD-PVEVQIDPT 224 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 + I T R+ GAGGQ+VN ++AV + H PTG+ V C QERSQ +N+ +A +LRAKLYE Sbjct: 225 ELEISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYE 284 Query: 287 LELQKREEI------ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 +L + A +G ++E +IR+Y + + V D R S +L+ Sbjct: 285 RQLAEANAAESSARRAQVGTGDRSE-----KIRTYNAKDNR-VTDHRLG-RNFSLDPMLE 337 Query: 341 GDLDDFMKATLA 352 G +DD + A +A Sbjct: 338 GQMDDVIGACIA 349 >gi|317475302|ref|ZP_07934568.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA] gi|316908556|gb|EFV30244.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA] Length = 370 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 111/344 (32%), Positives = 175/344 (50%), Gaps = 21/344 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V R ++T DP + + L +E + L + ++ KE L E+ E Sbjct: 15 VARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLSGIEEAKEIIANE 74 Query: 80 DDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 D + +E D Q + E+E +Q + LL + DS +A LE+ GAGG E+ +A Sbjct: 75 TDAEMREMAREELDACQTRQPELE-EQIKLLLVPADPQDSRNAILEIRGGAGGDEAAIFA 133 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYT++ E + +K + ++G G K + G N YG LK E GVHR+ R+ Sbjct: 134 GDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQRVP 193 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S VR+ + Sbjct: 194 ATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVRLRY 252 Query: 255 ----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 TGVV ++C + R Q KNK +A + LR +Y+ E QK I +I KT + Sbjct: 253 NWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKTMV 310 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G +IR+Y P + D R N + S +DGD+ D + Sbjct: 311 STGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCI 353 >gi|251782311|ref|YP_002996613.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390940|dbj|BAH81399.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127208|gb|ADX24505.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 359 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 135/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ + P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G +D+ + Sbjct: 288 QDEQDAE----RKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEII 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|306829484|ref|ZP_07462674.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249] gi|307708639|ref|ZP_07645102.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261] gi|315613125|ref|ZP_07888035.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC 49296] gi|322376710|ref|ZP_08051203.1| peptide chain release factor 1 [Streptococcus sp. M334] gi|304428570|gb|EFM31660.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249] gi|307615213|gb|EFN94423.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261] gi|315314687|gb|EFU62729.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC 49296] gi|321282517|gb|EFX59524.1| peptide chain release factor 1 [Streptococcus sp. M334] Length = 359 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|148984974|ref|ZP_01818217.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71] gi|147922672|gb|EDK73789.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71] Length = 354 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|270292697|ref|ZP_06198908.1| peptide chain release factor 1 [Streptococcus sp. M143] gi|270278676|gb|EFA24522.1| peptide chain release factor 1 [Streptococcus sp. M143] Length = 359 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|119625009|gb|EAX04604.1| hCG2025689 [Homo sapiens] Length = 238 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 92/222 (41%), Positives = 127/222 (57%), Gaps = 9/222 (4%) Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + + + MY ++A +++ E LE E G++ A+ I G AY +K E GVHR+ R Sbjct: 3 FTSEIFDMYQQYAAFKRWHFETLEYFPSEVGGLRHASASIGGSEAYRHMKFEGGVHRVQR 62 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + + HTS ++ + P + I + I+ D RIDT RASGAG QHVNTTDSAVRI Sbjct: 63 VPKTEKQGCVHTSTMTVAILPQPTE-INLVINPKDLRIDTKRASGAGEQHVNTTDSAVRI 121 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR- 310 H+PTGVV +CQQERSQ KNK A LRAKLY + ++ EEI + K +IG GR Sbjct: 122 VHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHVE--EEINKRQNARKIQIGSKGRS 179 Query: 311 -QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349 +IR+Y P V D R N + GD LD+ +++ Sbjct: 180 EKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQS 220 >gi|307704777|ref|ZP_07641673.1| peptide chain release factor 1 [Streptococcus mitis SK597] gi|307621686|gb|EFO00727.1| peptide chain release factor 1 [Streptococcus mitis SK597] Length = 359 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|307709438|ref|ZP_07645895.1| peptide chain release factor 1 [Streptococcus mitis SK564] gi|307619752|gb|EFN98871.1| peptide chain release factor 1 [Streptococcus mitis SK564] Length = 359 Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|148988472|ref|ZP_01819919.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73] gi|147926153|gb|EDK77227.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73] Length = 294 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 132/243 (54%), Gaps = 13/243 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 44 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 103 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 104 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 162 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE------ 286 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Sbjct: 163 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 222 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + Q E + IG ++E +IR+Y P V D R + +L G LD+ Sbjct: 223 QDEQDAERKSTIGTGDRSE-----RIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEV 276 Query: 347 MKA 349 + A Sbjct: 277 VDA 279 >gi|218129333|ref|ZP_03458137.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697] gi|217988510|gb|EEC54831.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697] Length = 370 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 105/317 (33%), Positives = 169/317 (53%), Gaps = 27/317 (8%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEE-DDCSILQETSDNLQRIKLEVEY 101 LM+ R+ +S I+E ++ + + + + E+A EE D C Q + ++IKL + Sbjct: 50 LMKARKEYMQVLSGIEEAKEIIANETDAEMREMAREELDACQTRQPELE--EQIKLLL-- 105 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + + DS +A LE+ GAGG E+ +A L RMYT++ E + +K + ++G Sbjct: 106 -----VPADPQDSRNAILEIRGGAGGDEAAIFAGDLFRMYTKYCETKGWKLDISSANEGA 160 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K + G N YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ ++ Sbjct: 161 AGGFKEIICSVTGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDV 219 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNK 273 I+E + + DT+R+ GAGGQ+VN +S VR+ + TGVV ++C + R Q KNK Sbjct: 220 VINEGEIKWDTFRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNK 279 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +A + LR +Y+ E QK I +I KT + G +IR+Y P + D R N Sbjct: 280 ERALSRLRTFIYDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINY 336 Query: 331 EKTSPSDVLDGDLDDFM 347 + S +DGD+ D + Sbjct: 337 TIYNLSAFMDGDIQDCI 353 >gi|320096082|ref|ZP_08027682.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178 str. F0338] gi|319976962|gb|EFW08705.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178 str. F0338] Length = 366 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 94/243 (38%), Positives = 133/243 (54%), Gaps = 9/243 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ +A LE+ AG GG ES +A+ L RMY R+AE + + E G K TL I Sbjct: 106 DALNAILEIKAGEGGEESALFASDLARMYARYAEAHGWSVTEMSATRTELGGFKDVTLAI 165 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 + P+ W LK E GVHR+ R+ +S R HTS ++ P ++D ++ I Sbjct: 166 RAKGSPAPDEGVWAHLKYEGGVHRVQRVPVTESAGRIHTSAVGVFAMPEIEDDEDVVIDP 225 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YR+SG GGQ VNTTDSAVR+TH+P+G+VV Q E+SQ +NK A +L ++L Sbjct: 226 NDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPSGIVVSMQNEKSQLQNKEAALRVLASRLA 285 Query: 286 ELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 KRE A+ S+ + +IR+Y P + D RT + + VL G LD Sbjct: 286 AEARAKREAEASAQRLSQVRTVDRSERIRTYNF-PENRIADHRTGFKAHNLDQVLGGALD 344 Query: 345 DFM 347 + Sbjct: 345 PVI 347 >gi|255693621|ref|ZP_05417296.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565] gi|260620597|gb|EEX43468.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565] Length = 370 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 113/346 (32%), Positives = 179/346 (51%), Gaps = 23/346 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILLE- 74 D V R ++T DP + + L +E + LD+ + KE IQ L N+ + Sbjct: 12 DGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQ--LLGNIEEAKN 69 Query: 75 -LALEED-DCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTES 130 LA E D D + + +L + +L V ++ + +L + DS +A LE+ GAGG E+ Sbjct: 70 ILATESDTDIREMAKEEMDLSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 130 AIFAGDLFRMYAKYCEVKGWKLEVSNANEGTAGGYKEIVCSVTGDNVYGTLKYESGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S V Sbjct: 190 QRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGV 248 Query: 251 RITHI----PTGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 R+ +I TGV +++C + R Q KNK +A LR +Y+ E QK I +I Sbjct: 249 RLRYIWKNPNTGVSEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKR 306 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 KT + G +IR+Y P + D R N + + +DGD+ D Sbjct: 307 KTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351 >gi|328853865|gb|EGG03001.1| hypothetical protein MELLADRAFT_109720 [Melampsora larici-populina 98AG31] Length = 413 Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 94/268 (35%), Positives = 152/268 (56%), Gaps = 21/268 (7%) Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 QE+S+NL IK + F + +S A +E+ G GG E+ +A L+ +Y R A Sbjct: 126 QESSNNLSNIKSRLLESLFPTPIS---HRQSALVEIKPGVGGVEAAHFATSLMNLYNRHA 182 Query: 146 EKRKFKTEALEIH---DGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 ++K+K + + + G G++ ATL I+G + Y ++ E GVHR+ R+ + S Sbjct: 183 LRQKWKVKPVNVEFMVSGHSMDGLREATLEIEGEDVYKRMRWEAGVHRVQRVPVMQNTSS 242 Query: 202 RHTSFSSIWVY-PVVDDSIEIEI-SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 HTS +++ P DS E + E D R++T R+ GAGGQHVN T+SAVR+TH+PTG+ Sbjct: 243 VHTSTAAVLPLDPGNQDSQEEALFEEKDVRMETMRSQGAGGQHVNKTESAVRLTHVPTGI 302 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE------EIANIGESSKTEIGWGRQIR 313 VV Q RSQH+N+A+A+ +LRA+L +L Q+++ ++ + S + + +IR Sbjct: 303 VVSMQDSRSQHQNRARAFMILRARLSDLRNQQKQVEERGLRLSQVKTSDRNQ-----KIR 357 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +Y Q + V D R + DV++G Sbjct: 358 TYNFQQGR-VTDHRIGLTLPRLHDVMEG 384 >gi|227431146|ref|ZP_03913202.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353098|gb|EEJ43268.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 356 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 102/334 (30%), Positives = 175/334 (52%), Gaps = 20/334 (5%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQD-RLCDNLIL-LELA-LE 78 LN + DP + N L +E RQ ++ + + IQD ++ + L+ E+A L Sbjct: 18 LNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQDIQVAEELLGDAEMAPLA 77 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D S L+ + L+ E + L D + +E+ AGG ES +A LL Sbjct: 78 KEDLSALKPEKEQLE------EQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFAADLL 131 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 MY R+AE++ + ++ E G K ++I G N Y LK E G HR+ R+ ++ Sbjct: 132 DMYRRYAERQNWSMSIIDQSTTEVGGYKEVAIMITGGNVYSKLKFESGAHRVQRVPATET 191 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS +++ V P ++ I+ E++ESD + +R+ GAGGQ+VN +AVR+ H PTG Sbjct: 192 QGRVHTSTATVGVMPEFEE-IDFELNESDLEEEFFRSGGAGGQNVNKVSTAVRLIHKPTG 250 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 ++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E + K+ +G G +IR+Y Sbjct: 251 IMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--SEYAAQRKSAVGTGDRSERIRTY 308 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 P V D R + +++G+L + + A Sbjct: 309 NY-PQNRVTDHRIGLTLNKLDRIMNGELGEVIDA 341 >gi|306825267|ref|ZP_07458609.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432703|gb|EFM35677.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 359 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGHSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|153807530|ref|ZP_01960198.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185] gi|149129892|gb|EDM21104.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185] Length = 370 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 105/344 (30%), Positives = 170/344 (49%), Gaps = 19/344 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D V R ++T DP + + L +E + LD+ + KE L + + Sbjct: 12 DGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLGNIEEARNIL 71 Query: 77 LEEDDCSILQ----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + + E + +R+ + E + + + DS +A LE+ G GG E+ Sbjct: 72 ANESDADMREMAKEEMDSSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGTGGDEAAI 131 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ R Sbjct: 132 FAGDLFRMYAKYCETKGWKMEVSSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQR 191 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S VR+ Sbjct: 192 VPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVRL 250 Query: 253 THI----PTGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 +I TGV +++C + R Q KNK +A LR +Y+ E QK I +I KT Sbjct: 251 RYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRKT 308 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + G +IR+Y P + D R N + + +DGD+ D Sbjct: 309 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLTAFMDGDIQD 351 >gi|302759769|ref|XP_002963307.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii] gi|300168575|gb|EFJ35178.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii] Length = 622 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 112/312 (35%), Positives = 168/312 (53%), Gaps = 29/312 (9%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFE 105 +E ++LD ++ IK ++ + + + L EL E +D + + S LQ EV Q + Sbjct: 80 KELRNLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHD 139 Query: 106 SLL----SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 LL EADS LE E + LR+ + + F + D Sbjct: 140 VLLELIPKDEADSRGYILE--------ELEVTKRQFLRLISSRC-RHVFLVHVECLLDFY 190 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 E + A+ +I G YG LK E GVHR+ R+ + R HTS +S+ + P ++ +++ Sbjct: 191 ECS-QEASAVISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANE-VDV 248 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV Q ERSQHKNKA+A ++L Sbjct: 249 EIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILY 308 Query: 282 AKLYELE----LQKREEIA--NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A+LYELE + R E+ IG S ++E +IR+Y P V D R + + + Sbjct: 309 ARLYELERSRAVASRSELRQDQIGSSDRSE-----RIRTYNF-PQGRVTDHRVGVTQHAI 362 Query: 336 SDVLDG-DLDDF 346 +++G D+D++ Sbjct: 363 EQIMEGIDVDNW 374 >gi|325281736|ref|YP_004254278.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712] gi|324313545|gb|ADY34098.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712] Length = 368 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 37/341 (10%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + Q++ L +E + L+ R D L++EE +L E Sbjct: 25 DPEVIQDMERYVRLTKEYKELETIT--------RTADKFKAALLSVEESKDILLHEEDKE 76 Query: 92 LQRIKLEVEYKQFESLLSG-------------EADSNDAYLEVHAGAGGTESQDWANMLL 138 L+ + E+E ++ E L G DS + LE+ G GG E+ +A L Sbjct: 77 LREMA-EMEIEELEDKLPGMEQELKLLLVPADPDDSKNVILEIRGGTGGDEACLFAGDLF 135 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY ++ E++ +K E ++G G K + G YG +K E GVHR+ R+ ++ Sbjct: 136 RMYAKFCERKGWKVEVTNANEGTAGGYKEIVASVTGKGVYGIMKYESGVHRVQRVPATET 195 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI--- 255 R HTS +++ V P ++ E+EI+E + DT+R+ GAGGQ+VN +S VR+ ++ Sbjct: 196 QGRVHTSAATVAVLPEA-EAFEVEINEGAIKWDTFRSGGAGGQNVNKVESGVRLRYVWQN 254 Query: 256 P-TGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 P TGV +++C + R Q KNK +A + LR +Y+ E QK I +I KT + G Sbjct: 255 PNTGVAEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDISAKRKTMVSTGD 312 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N + V+DG++D+ ++ Sbjct: 313 RSAKIRTYNY-PQGRVTDHRINFTLYNLQAVMDGEIDEIIE 352 >gi|255079106|ref|XP_002503133.1| predicted protein [Micromonas sp. RCC299] gi|226518399|gb|ACO64391.1| predicted protein [Micromonas sp. RCC299] Length = 366 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/222 (36%), Positives = 133/222 (59%), Gaps = 7/222 (3%) Query: 98 EVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 E+E K +LL + D + LE+ AG GG E+ WA L RMY R+A+ + + L Sbjct: 97 ELEEKMTIALLPKDPLDDKNIMLEIRAGTGGDEAGIWAGDLWRMYQRYAQSKGWSATILS 156 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 + + G K + I G + Y LK E GVHR+ R+ +S R TS +++ V P VD Sbjct: 157 SNAADFGGYKEIVVEINGDSVYSELKWEAGVHRVQRVPATESQGRVQTSTATVAVMPEVD 216 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E++I + D I + R+ GAGGQ+VN ++A+ + H PTG+ V C +ER+Q KN+ +A Sbjct: 217 E-VEVKIDDKDIEISSARSGGAGGQNVNKVETAIDLLHKPTGIRVFCTEERTQLKNRIRA 275 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 + +LRAKL+E++L+++++ I K ++G G +IR+Y Sbjct: 276 FQILRAKLFEIQLEEQQK--EIAGRRKAQVGSGARSEKIRTY 315 >gi|322385289|ref|ZP_08058934.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC 51100] gi|321270548|gb|EFX53463.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC 51100] Length = 359 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P +++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEIEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|322387784|ref|ZP_08061393.1| peptide chain release factor RF1 [Streptococcus infantis ATCC 700779] gi|321141651|gb|EFX37147.1| peptide chain release factor RF1 [Streptococcus infantis ATCC 700779] Length = 359 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|307069624|ref|YP_003878101.1| putative peptide chain release factor RF-1 [Candidatus Zinderia insecticola CARI] gi|306482884|gb|ADM89755.1| putative peptide chain release factor RF-1 [Candidatus Zinderia insecticola CARI] Length = 345 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 86/234 (36%), Positives = 133/234 (56%), Gaps = 8/234 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 LE+ A +GG E+ + L +MY +++K +K + L G K + I G N+Y Sbjct: 116 LEIRAASGGEEAALFVKDLYKMYFNFSQKNNWKIKILSFIKSNNNGYKEIIIQIYGLNSY 175 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E G HR+ RI +S+ + HTS +I V + ++ +I I+ D +I T++ASGA Sbjct: 176 SLLKNESGNHRVQRIPITESHDKVHTSTCTIAVINKIKNNKKILINNKDLKIHTFKASGA 235 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN TDSAVRI HIPT + V+CQ RSQH NK A +L+ K+ ++ + I N Sbjct: 236 GGQHVNKTDSAVRIFHIPTKITVECQSNRSQHINKKNALKILKYKILKIN---KNSIKNK 292 Query: 299 GES-SKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + K+ IG G+ +IR+Y P V + + N+ + + +L+G+L+ K Sbjct: 293 EDKFRKSLIGTGKRSEKIRTYNF-PQNRVTNHKINLTVYNLNSILNGNLEKIFK 345 >gi|323337560|gb|EGA78805.1| Mrf1p [Saccharomyces cerevisiae Vin13] gi|323348703|gb|EGA82945.1| Mrf1p [Saccharomyces cerevisiae Lalvin QA23] Length = 303 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 8/174 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177 LE+ G GG E+ + LL MY +A RK+K + ++ E +GI A L I+ + Sbjct: 47 LELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGS 106 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRI 230 Y L+ E GVHR+ RI ++ R HTS +++ V P + D + E + R+ Sbjct: 107 YDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRV 166 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D RASG GGQHVNTTDSAVR+THIP+G+VV Q ERSQHKNKA+A+ +LRA+L Sbjct: 167 DIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARL 220 >gi|293365352|ref|ZP_06612069.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037] gi|307703894|ref|ZP_07640835.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037] gi|291316802|gb|EFE57238.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037] gi|307622729|gb|EFO01725.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037] Length = 359 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ + P V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|297570956|ref|YP_003696730.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM 20595] gi|296931303|gb|ADH92111.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM 20595] Length = 370 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/246 (38%), Positives = 143/246 (58%), Gaps = 14/246 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS DA +EV AG GG ES +A L+RMY R+AE + + + L E G K L + Sbjct: 106 DSRDAIVEVKAGEGGEESALFAADLVRMYQRYAESKGWSVQTLSATHTELGGYKDIQLAV 165 Query: 173 KG------PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 K P W LK E GVHR+ R+ +S R HTS + + V+ VD+ E++++ Sbjct: 166 KSSSIPEDPADGVWAHLKFEAGVHRVQRVPATESQGRIHTSAAGVLVFAEVDEPEEVQVA 225 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +++ RID +R+SG GGQ VNTTDSAVRITH+PTG+ V Q E+SQ KN+ A +L A+L Sbjct: 226 DNELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGITVSMQDEKSQIKNREAAMRVLLARL 285 Query: 285 YELELQKREEIANIGESSKTE---IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +L+L+ E+ A + +++ + ++R+Y P + D RT + + VL+G Sbjct: 286 RQLQLE--EQAAKEADQRRSQVRTVDRSERVRTYNF-PENRIADHRTGYKAHNLDAVLNG 342 Query: 342 DLDDFM 347 +L+ + Sbjct: 343 ELEPVI 348 >gi|303283714|ref|XP_003061148.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457499|gb|EEH54798.1| predicted protein [Micromonas pusilla CCMP1545] Length = 404 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 159/306 (51%), Gaps = 27/306 (8%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-------SFIKEIQDR------LCDNLIL 72 L + DP + N E + L + L + + I+E+Q+ +L + Sbjct: 59 LTFRLADPDVASNAKEFQKLSKALGELTSVVDQYARYKECIEELQEAKAMVKDAAGDLEM 118 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+A EE + L E D L+ E L D + LE+ AG GG E+ Sbjct: 119 GEMAREE--ATALNEEMDALE------ESMTMALLPRDPLDEKNIVLEIRAGTGGDEAGI 170 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA L RMY+R+A+ + +K L + + G K + + G + Y LK E GVHR+ R Sbjct: 171 WAGDLWRMYSRYADSKGWKASVLTTNPADSGGYKEIVVELVGDSVYSELKWEAGVHRVQR 230 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R TS +++ V P VD+ +E++I + D + T R+ GAGGQ+VN ++AV + Sbjct: 231 VPATESQGRIQTSTATVAVMPEVDE-VEVKIDDKDIELTTARSGGAGGQNVNKVETAVDL 289 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H PTG+ + C +ER+Q KN+ +A +LR++L+EL+++ E+ + K ++G G Sbjct: 290 VHKPTGIRIFCTEERTQLKNRIRAMQILRSRLFELQME--EQAKEVAGRRKAQVGSGARS 347 Query: 310 RQIRSY 315 +IR+Y Sbjct: 348 EKIRTY 353 >gi|23335364|ref|ZP_00120601.1| COG1186: Protein chain release factor B [Bifidobacterium longum DJO10A] Length = 240 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 115/202 (56%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T+ P LW + A+ + ++ + + R+ D L+EL EE D L Sbjct: 36 LETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNSASQRIDDVETLVELGHEEGDQDSL 95 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + I+ +++ + ++LL GE D A + + +GAGG ++ D+A MLLRMY R+ Sbjct: 96 DEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYC 155 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ FK + ++ EEAGIKSAT + P AYG L E G HRLVRISP+D+ RR TS Sbjct: 156 ERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTS 215 Query: 206 FSSIWVYPVVDDSIEIEISESD 227 F+++ V P+V+ + I+I +D Sbjct: 216 FAAVEVVPLVEATDHIDIPYTD 237 >gi|261338133|ref|ZP_05966017.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093] gi|270276761|gb|EFA22615.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093] Length = 362 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/240 (40%), Positives = 137/240 (57%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A LLRMYTR+AEKR + + E G+K L I Sbjct: 104 DARDMIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVTIQSENSTELGGVKDVQLAI 163 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 + P W LK E GVHR+ RI +S R TS + + V+P +D EIEI Sbjct: 164 RAKGTVAPEDGVWASLKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +ID + +SG GGQ VNTT SAVR+THIPTG+VV Q E+SQ +N+A A +L+++L Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL 283 Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ Q+ E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|221133260|ref|XP_002171178.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 205 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 75/186 (40%), Positives = 119/186 (63%), Gaps = 2/186 (1%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 +QE Q ++E + +S++ + D SN+A +E+ AG GG E+ +A +L MY + Sbjct: 19 VQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGTGGREAAIFAAEMLSMYDK 78 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 ++ ++K E L+ + + G+K ++ I G +G LK E GVHR+ R+ +S R H Sbjct: 79 YSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEIGVHRVQRVPITESLGRVH 138 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS ++ V P +SI++ ++ D ++DT+R+SGAGGQHVNTTDSAVR+THIP+G+VV Sbjct: 139 TSTVTVAVLPQ-PESIDVVLNMKDVKVDTFRSSGAGGQHVNTTDSAVRLTHIPSGLVVAV 197 Query: 264 QQERSQ 269 Q +RSQ Sbjct: 198 QSQRSQ 203 >gi|306827355|ref|ZP_07460642.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC 10782] gi|304430502|gb|EFM33524.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC 10782] Length = 359 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 143/258 (55%), Gaps = 14/258 (5%) Query: 100 EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 EY++ +L D ND LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 93 EYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVME 152 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 GIK ++ G + Y LK E G HR+ R+ +S R HTS +++ V P V+ Sbjct: 153 SSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE 212 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +E +I D R+D Y ASGAGGQ+VN +AVR+ HIPTG+ V+ Q+ER+Q KN+ +A Sbjct: 213 E-VEYDIDPKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKA 271 Query: 277 WNMLRAKLYE--LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 ++RA++ + ++ + E+ A K+ +G G +IR+Y + V D R + Sbjct: 272 MKIIRARVADHFAQIAQDEQDA----ERKSTVGTGDRSERIRTYNFSQNR-VTDHRIGLT 326 Query: 332 KTSPSDVLDGDLDDFMKA 349 +L G +D+ + A Sbjct: 327 LQKLDTILSGKMDEVIDA 344 >gi|156844661|ref|XP_001645392.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM 70294] gi|156116054|gb|EDO17534.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM 70294] Length = 404 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/252 (36%), Positives = 139/252 (55%), Gaps = 27/252 (10%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177 +E+ G GG E+ +A LL MY +A +K+K E + ++ E +GI A L I P A Sbjct: 146 IELRPGVGGIEAMIFAQDLLNMYIGYATSKKWKHEIISRNENESGSGIVDAILSINEPGA 205 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-------ISESDCRI 230 Y ++ E GVHR+ R+ ++ R HTS +++ V P + + E E + RI Sbjct: 206 YDRMRLEVGVHRVQRVPATETKGRTHTSTAAVVVLPQLGNGSEREAEAYERTFKPDEIRI 265 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 D RA G GGQHVNTTDSAVR+TH P+G+V+ Q ERSQHKNKA+A+ +L++KL E+E Sbjct: 266 DVMRARGKGGQHVNTTDSAVRLTHFPSGIVISMQDERSQHKNKAKAFAILKSKLAEIERL 325 Query: 291 ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 ++E+++ S K IR+Y P + D R + + ++V+ G Sbjct: 326 EKEEKERSARKEQVSTTDRSDK--------IRTYNY-PQNRITDHRCGLTLYALNEVITG 376 Query: 342 D-LDDFMKATLA 352 + LD+ M A Sbjct: 377 ERLDEVMDVVKA 388 >gi|332027664|gb|EGI67732.1| Peptide chain release factor 1-like, mitochondrial [Acromyrmex echinatior] Length = 406 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 123/198 (62%), Gaps = 3/198 (1%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AG GG E+ + L MY +A+ E ++I + GI+ +++I G Sbjct: 153 IEITAGVGGQEAMLFVKDLYDMYIDYAKCLDLDHEVIDIEMTDNKGIRHVSIMISGDQVD 212 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 + + E GVHR+ R+ + + R HTS +S+ + PV + I+I I+E+D +I+T R+SGA Sbjct: 213 KF-QHEGGVHRVQRVPATEKSGRVHTSTASVAILPVPSE-IQIMINENDLKIETKRSSGA 270 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAVRITH+P+G+ V CQ +RSQ++NK A + LR+ LYE +L K+ + Sbjct: 271 GGQHVNTTDSAVRITHLPSGLSVTCQVDRSQNRNKKIAMDKLRSILYEQQLNKQTSFTSK 330 Query: 299 GESSKTEIGW-GRQIRSY 315 + +G+ +IR+Y Sbjct: 331 LRQKQMGMGFRNEKIRTY 348 >gi|116618873|ref|YP_819244.1| peptide chain release factor 1 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122270927|sp|Q03VA1|RF1_LEUMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116097720|gb|ABJ62871.1| bacterial peptide chain release factor 1 (bRF-1) [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 356 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCDNLILL---ELA-L 77 LN + DP + N L +E RQ ++ + + IQD + D LL E+A L Sbjct: 18 LNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQD-IQDAEELLGDAEMAPL 76 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 ++D S L+ + L+ E + L D + +E+ AGG ES +A L Sbjct: 77 AKEDLSALKPEKEQLE------EQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFAADL 130 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 L MY R+AE++ + ++ E G K ++I G N Y LK E G HR+ R+ + Sbjct: 131 LDMYRRYAERQNWSMSIIDESTTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQRVPATE 190 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + R HTS +++ V P ++ I+ E++ESD + +R+ GAGGQ+VN +AVR+ H PT Sbjct: 191 TQGRVHTSTATVGVMPEFEE-IDFELNESDLEEEFFRSGGAGGQNVNKVSTAVRLIHKPT 249 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E + K+ +G G +IR+ Sbjct: 250 GIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--SEYAAQRKSAVGTGDRSERIRT 307 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 Y P V D R + +++G+L + + A Sbjct: 308 YNY-PQNRVTDHRIGLTLNKLDRIMNGELGEVIDA 341 >gi|29349618|ref|NP_813121.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron VPI-5482] gi|253570013|ref|ZP_04847422.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6] gi|298383879|ref|ZP_06993440.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14] gi|32171531|sp|Q8A011|RF1_BACTN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|29341528|gb|AAO79315.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron VPI-5482] gi|251840394|gb|EES68476.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6] gi|298263483|gb|EFI06346.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14] Length = 370 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 112/346 (32%), Positives = 175/346 (50%), Gaps = 23/346 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNL----I 71 D V R ++T DP + + L +E + LD+ + KE IQ L N+ Sbjct: 12 DGLVARFEEISTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYIQ--LLGNIEEAKN 69 Query: 72 LLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L + D + +E DN Q R+ E + + + DS +A LE+ GAGG E+ Sbjct: 70 ILSNESDADMREMAKEEMDNSQERLPALEEEIKLMLVPADPQDSKNAILEIRGGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 130 AIFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGYKEIVCSVTGDNVYGILKYESGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S V Sbjct: 190 QRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGV 248 Query: 251 RITHI----PTGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 R+ +I TGV +++C + R Q KNK +A LR +Y+ E QK I +I Sbjct: 249 RLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKR 306 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 KT + G +IR+Y P + D R N + + +DGD+ D Sbjct: 307 KTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351 >gi|297679454|ref|XP_002817545.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like isoform 2 [Pongo abelii] Length = 344 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/199 (45%), Positives = 114/199 (57%), Gaps = 17/199 (8%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 131 LEVTAGVGGGLRQASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 190 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKE 249 Query: 275 QAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 A LRAKLY + L+ KR+ I SK G +IR+Y P V D R N Sbjct: 250 LAMTKLRAKLYSMHLEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRIN- 304 Query: 331 EKTSPSDVLDGDLDDFMKA 349 KT DL+ FM+ Sbjct: 305 -KTL------HDLETFMRG 316 >gi|20799561|gb|AAM28548.1|AF494518_1 peptide releasing factor 1 [Tomato big bud phytoplasma] Length = 269 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/201 (39%), Positives = 117/201 (58%), Gaps = 6/201 (2%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA----DSNDAYLEVHAGAGGTESQD 132 LEE+ + + +NL IK++ + Q E LL + D D +E+ G GG E+ Sbjct: 70 LEEEIIQLAEXEKNNL-IIKIKXKTNQLEKLLYPDQYNAEDKQDVIVEIKKGIGGQEANL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + + L R Y ++ E +K+K E + + + GI S +I G N + +LK E G+HR+ R Sbjct: 129 FVSDLFRAYKKYIEYKKWKLEIINLLSTSKEGISSVEFVINGKNVFYYLKYESGIHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I ++ R HTS I V P ++ +IEI+ +D R+DT+ ASG GGQ VNTT SAVR+ Sbjct: 189 IPKTENKGRIHTSTVKILVIPN-NNHQKIEINWNDIRVDTFNASGPGGQSVNTTKSAVRL 247 Query: 253 THIPTGVVVQCQQERSQHKNK 273 TH+PTG+ CQ +SQH NK Sbjct: 248 THLPTGISSSCQIAKSQHDNK 268 >gi|53712203|ref|YP_098195.1| peptide chain release factor 1 [Bacteroides fragilis YCH46] gi|60680383|ref|YP_210527.1| peptide chain release factor 1 [Bacteroides fragilis NCTC 9343] gi|253563758|ref|ZP_04841215.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5] gi|265765536|ref|ZP_06093811.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16] gi|61214601|sp|Q64XW5|RF1_BACFR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|81316547|sp|Q5LH11|RF1_BACFN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52215068|dbj|BAD47661.1| peptide chain release factor 1 [Bacteroides fragilis YCH46] gi|60491817|emb|CAH06575.1| putative peptide chain release factor 1 [Bacteroides fragilis NCTC 9343] gi|251947534|gb|EES87816.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5] gi|263254920|gb|EEZ26354.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16] gi|301161917|emb|CBW21461.1| putative peptide chain release factor 1 [Bacteroides fragilis 638R] Length = 370 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 111/353 (31%), Positives = 178/353 (50%), Gaps = 22/353 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D V R ++T DP + + L +E + LD+ + KE L + ++ Sbjct: 12 DGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLANIEEAKDIL 71 Query: 77 LEEDDC---SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131 E D + +E DN Q +L V ++ + LL + D +A LE+ G GG E+ Sbjct: 72 SNESDADMREMAKEEMDNSQE-RLPVLEEEIKLLLVPADPQDGKNAILEIRGGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHI----PTGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I TGV +++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM-KATLA 352 T + G +IR+Y P + D R N + + +DGD+ + + K T+A Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVA 359 >gi|326470521|gb|EGD94530.1| peptide chain release factor 1 [Trichophyton tonsurans CBS 112818] Length = 438 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 158/319 (49%), Gaps = 43/319 (13%) Query: 53 DNAISFIKEIQDRLCDNLILLEL-ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESL 107 D A I E+Q + + EL +L EDD + L SD L+R + F + Sbjct: 91 DTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSSLSDTLKRAL--IPRHPFADM 148 Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG- 164 +E+ GAGG E+ +A +LRMYT + R +T +E DG AG Sbjct: 149 --------PCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGA 200 Query: 165 ---IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV------ 215 + + ++ P +Y L+ E GVHR+ R+ ++ R HTS S+ + P Sbjct: 201 EERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPENNQE 260 Query: 216 -------DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 D + + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG V+ Q RS Sbjct: 261 DSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRS 320 Query: 269 QHKNKAQAWNMLRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQM 322 QH+N+ +AW +LRAKL + + RE+ +G +KT G G +IR+Y + Sbjct: 321 QHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRC 378 Query: 323 VKDLRTNIEKTSPSDVLDG 341 D R+ + + V+DG Sbjct: 379 T-DHRSGMTVHNIGKVMDG 396 >gi|298252617|ref|ZP_06976411.1| protein chain release factor A [Gardnerella vaginalis 5-1] gi|297532981|gb|EFH71865.1| protein chain release factor A [Gardnerella vaginalis 5-1] Length = 366 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 155/290 (53%), Gaps = 15/290 (5%) Query: 65 RLCDNLILLELA--LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +LCD+ E A + DD +E ++I E + + D+ D +E+ Sbjct: 61 QLCDDF---EAANEMASDDPDFAEEAKRLEEQIPAAKEKLRTALIPRDPDDARDMIMEIK 117 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNA 177 AG GG E+ +A LLRMY R+AEKR + T + E G+K L I+ P Sbjct: 118 AGTGGEEAALFAGDLLRMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPED 177 Query: 178 YGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYR 234 W +K E GVHR+ RI +S R TS + + V+P +D EIEI D +ID + Sbjct: 178 GVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFM 237 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKRE 293 +SG GGQ VNTT SAVR+THIPTG+VV Q E+SQ +N+A A +L+++L ++ Q+ Sbjct: 238 SSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAA 297 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 298 EAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDL 346 >gi|300775397|ref|ZP_07085259.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC 35910] gi|300506137|gb|EFK37273.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC 35910] Length = 361 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 85/245 (34%), Positives = 140/245 (57%), Gaps = 12/245 (4%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA--GIKSAT 169 AD + +E+ AG GG E+ + + RMYT + + + ++ E + D EA G K Sbjct: 109 ADDKNVIVELRAGTGGDEAAIFVEDIYRMYTMYFKAKGWRHE---VTDSNEAAKGYKELI 165 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + ++G YG +K E GVHR+ R+ +S R HTS ++ V P ++ +++EI+ +D Sbjct: 166 MKVEGEGVYGIMKFESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDVEINPADIE 224 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 + T R+ GAGGQ+VN ++ V++TH P+G+VV CQQ RSQ N+ A MLRAKLY+++L Sbjct: 225 MQTSRSGGAGGQNVNKVETKVQLTHKPSGLVVVCQQARSQLANRELAMEMLRAKLYDIKL 284 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 Q+ + +I KT + G +I++Y P V D R N + ++GD+ + Sbjct: 285 QEVQ--GDIAAQRKTMVSTGDRSAKIKTYNY-PQGRVTDHRINKSMYNLDAYMNGDISEM 341 Query: 347 MKATL 351 + A + Sbjct: 342 IDAVI 346 >gi|283783535|ref|YP_003374289.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05] gi|283441331|gb|ADB13797.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05] Length = 365 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 155/290 (53%), Gaps = 15/290 (5%) Query: 65 RLCDNLILLELA--LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +LCD+ E A + DD +E ++I E + + D+ D +E+ Sbjct: 60 QLCDDF---EAANEMASDDPDFAEEAKRLEEQIPAAKEKLRTALIPRDPDDARDMIMEIK 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNA 177 AG GG E+ +A LLRMY R+AEKR + T + E G+K L I+ P Sbjct: 117 AGTGGEEAALFAGDLLRMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPED 176 Query: 178 YGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYR 234 W +K E GVHR+ RI +S R TS + + V+P +D EIEI D +ID + Sbjct: 177 GVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFM 236 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKRE 293 +SG GGQ VNTT SAVR+THIPTG+VV Q E+SQ +N+A A +L+++L ++ Q+ Sbjct: 237 SSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAA 296 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 297 EAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDL 345 >gi|213581389|ref|ZP_03363215.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 197 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 77/176 (43%), Positives = 111/176 (63%), Gaps = 6/176 (3%) Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D RID Sbjct: 3 ISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRID 62 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E K Sbjct: 63 TFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAK 122 Query: 292 REEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 R++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 123 RQQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 175 >gi|307706536|ref|ZP_07643343.1| peptide chain release factor 1 [Streptococcus mitis SK321] gi|307617991|gb|EFN97151.1| peptide chain release factor 1 [Streptococcus mitis SK321] Length = 359 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 134/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLIMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V++ +E ++ D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEE-VEYDLDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|229818480|ref|ZP_04448761.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM 20098] gi|229784350|gb|EEP20464.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM 20098] Length = 362 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 138/240 (57%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A LLRMYTR+AEKR + + E G+K + I Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWTVSVQSENTTELGGVKDVQVAI 163 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 + P W LK E GVHR+ R+ +S R TS + + V+P DD+ EI+I Sbjct: 164 RAKGTPAPEDGVWASLKYEGGVHRVQRVPVTESQGRIQTSAAGVIVFPEADDDNDEIDID 223 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +ID + +SG GGQ VNTT SAVR+THIPTG+VV Q E+SQ +N+A A +L+++L Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL 283 Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ Q+ E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|50309221|ref|XP_454617.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|1172907|sp|P41767|RF1M_KLULA RecName: Full=Peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|641909|gb|AAB18362.1| peptide termination factor [Kluyveromyces lactis] gi|49643752|emb|CAG99704.1| KLLA0E14807p [Kluyveromyces lactis] Length = 396 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 6/172 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL-EIHDGEEAGIKSATLLIKGPNA 177 LE+ G GG+E+ + LL MY +A K+K + + + +G+ A L I P + Sbjct: 140 LELRPGVGGSEAMIFTQDLLNMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGS 199 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-----DDSIEIEISESDCRIDT 232 Y LK E GVHR+ R+ +S R HTS +++ V P + D+ E + RID Sbjct: 200 YDKLKFEAGVHRVQRVPATESKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRIDV 259 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 RASG GGQHVNTTDSAVR+TH P+G+V+ Q+ERSQH+NKA+A+ +LRA+L Sbjct: 260 MRASGKGGQHVNTTDSAVRLTHYPSGIVISMQEERSQHRNKAKAFAILRARL 311 >gi|170781877|ref|YP_001710209.1| peptide chain release factor 1 [Clavibacter michiganensis subsp. sepedonicus] gi|189039963|sp|B0RAQ5|RF1_CLAMS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169156445|emb|CAQ01593.1| peptide chain release factor 1 (RF-1) [Clavibacter michiganensis subsp. sepedonicus] Length = 359 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/248 (39%), Positives = 140/248 (56%), Gaps = 12/248 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ G GG ES +A LLRMY +AE R++KTE L + G K + I Sbjct: 100 DARDVIMEIKMGEGGAESALFAADLLRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAI 159 Query: 173 KG----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG P W LK E GVHR+ R+ +S R HTS + + V P V++ E+ + + Sbjct: 160 KGTSDDPALGVWAHLKYEGGVHRVQRVPATESQGRIHTSAAGVLVIPEVEEVEEVPLDPN 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +ID YR+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+ +LRA++ Sbjct: 220 DLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARV-- 277 Query: 287 LELQKRE---EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L Q+ E E + + S + +IR+Y P + D RT + + V+DG L Sbjct: 278 LAKQQEEIDAEASAVRRSQIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVMDGAL 336 Query: 344 DDFMKATL 351 D +++ + Sbjct: 337 DPVVESCI 344 >gi|114609865|ref|XP_001140693.1| PREDICTED: mitochondrial translational release factor 1-like isoform 4 [Pan troglodytes] Length = 344 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 89/201 (44%), Positives = 115/201 (57%), Gaps = 11/201 (5%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 190 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKE 249 Query: 275 QAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 A LRAKLY + L+ KR+ I SK G +IR+Y P V D R N Sbjct: 250 LAMTKLRAKLYSMHLEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRINK 305 Query: 331 EKTSPSDVLDGD--LDDFMKA 349 + GD LD+ +++ Sbjct: 306 TLHDLETFMQGDYLLDELVQS 326 >gi|302496498|ref|XP_003010250.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371] gi|291173792|gb|EFE29610.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371] Length = 438 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 139/258 (53%), Gaps = 30/258 (11%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG----IKSATLLI 172 +E+ GAGG E+ +A +LRMYT + R +T +E DG AG + + + Sbjct: 152 IEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEV 211 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------------DDSI 219 + P +Y L+ E GVHR+ R+ ++ R HTS S+ + P D + Sbjct: 212 ETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPESNQEDSPLNFDDPNS 271 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG V+ Q RSQH+N+ +AW + Sbjct: 272 DYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLL 331 Query: 280 LRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 LRAKL + + RE+ +G +KT G G +IR+Y + D R+ + Sbjct: 332 LRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRCT-DHRSGMTVH 388 Query: 334 SPSDVLDG--DLDDFMKA 349 + V+DG +L+ M++ Sbjct: 389 NIGKVMDGGENLEKIMES 406 >gi|50954441|ref|YP_061729.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str. CTCB07] gi|61214606|sp|Q6AG71|RF1_LEIXX RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|50950923|gb|AAT88624.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 358 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/248 (39%), Positives = 143/248 (57%), Gaps = 12/248 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS DA +E+ G GG ES +A LL MY +A+ R++K E +E + GIK + Sbjct: 100 DSRDAIMEIKMGEGGAESALFAGDLLSMYLHYADSRRWKAEIIEQTSSDLGGIKDVQVAF 159 Query: 173 KGPNA------YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 KG ++ + LK E GVHR+ R+ +S R HTS + + V+P VD+ E+EI+ + Sbjct: 160 KGSSSDPAEGVWAHLKYEGGVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEINPN 219 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +ID +R+SG GGQ VNTTDSAVRITH PTG+VV Q E+SQ +N+ A +LRA+L Sbjct: 220 DLKIDVFRSSGPGGQSVNTTDSAVRITHAPTGIVVSMQNEKSQLQNREAAMRVLRARL-- 277 Query: 287 LELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L Q+ E A E K +I +IR+Y P + D RT + + V++G L Sbjct: 278 LAKQQEEADAEAAEFRKGQIRTMERSERIRTYNF-PENRIADHRTGYKAYNLDAVMNGAL 336 Query: 344 DDFMKATL 351 +++ + Sbjct: 337 GPVIESCI 344 >gi|296804966|ref|XP_002843310.1| peptide chain release factor 1 [Arthroderma otae CBS 113480] gi|238845912|gb|EEQ35574.1| peptide chain release factor 1 [Arthroderma otae CBS 113480] Length = 438 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 140/258 (54%), Gaps = 30/258 (11%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGEEAG----IKSATLLI 172 +E+ GAGG E+ +A +LRMY + R +T + E DG AG + A + I Sbjct: 152 IEIRPGAGGDEAGLFAAEMLRMYMAFCSSRGLRTAIIKKETEDGVGAGAEERLSEAVMEI 211 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE---------- 222 + P +Y L+ E GVHR+ R+ ++ R HTS S+ + P D+ + + Sbjct: 212 ETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPDNNQGDSPLNFDDPNS 271 Query: 223 ---ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 ++ D + + +RASGAGGQHVN T+SAVR+THIPTG V+ Q RSQH+N+ +AW + Sbjct: 272 DYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLL 331 Query: 280 LRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 LRAKL + + RE+ +G +KT G G +IR+Y + D R+ + Sbjct: 332 LRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRCT-DHRSGMTVH 388 Query: 334 SPSDVLDG--DLDDFMKA 349 + V+DG +L+ M++ Sbjct: 389 NIGKVMDGGENLEKIMES 406 >gi|327306561|ref|XP_003237972.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892] gi|326460970|gb|EGD86423.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892] Length = 438 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 89/258 (34%), Positives = 139/258 (53%), Gaps = 30/258 (11%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG----IKSATLLI 172 +E+ GAGG E+ +A +LRMYT + R +T +E DG AG + + + Sbjct: 152 IEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEV 211 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------------DDSI 219 + P +Y L+ E GVHR+ R+ ++ R HTS S+ + P D + Sbjct: 212 ETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPENNQEDSPLNFDDPNS 271 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG V+ Q RSQH+N+ +AW + Sbjct: 272 DYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLL 331 Query: 280 LRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 LRAKL + + RE+ +G +KT G G +IR+Y + D R+ + Sbjct: 332 LRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRCT-DHRSGMTVH 388 Query: 334 SPSDVLDG--DLDDFMKA 349 + V+DG +L+ M++ Sbjct: 389 NIGKVMDGGENLEKIMES 406 >gi|171741092|ref|ZP_02916899.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC 27678] gi|171276706|gb|EDT44367.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC 27678] Length = 362 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 106/282 (37%), Positives = 155/282 (54%), Gaps = 18/282 (6%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQD 132 E+A E+ D + E + L+ E+E K +L+ + D + D +E+ AG GG E+ Sbjct: 67 EMASEDPDFA---EEAKRLENELPEIEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAAL 123 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQ 185 +A LLRMY R+AEKR + + E G+K L I+ P W LK E Sbjct: 124 FAGDLLRMYMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEG 183 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ RI +S R TS + + V+P +D EI+I D +ID + +SG GGQ VN Sbjct: 184 GVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVN 243 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TT SAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ EE A + + Sbjct: 244 TTYSAVRMTHIPTGIVVSMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHS 301 Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ +IR+Y P + D RTN + + VLDGDL Sbjct: 302 QVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|183602493|ref|ZP_02963858.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis HN019] gi|219683536|ref|YP_002469919.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis AD011] gi|241190567|ref|YP_002967961.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195973|ref|YP_002969528.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254790862|sp|B8DTL4|RF1_BIFA0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183218134|gb|EDT88780.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis HN019] gi|219621186|gb|ACL29343.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis AD011] gi|240248959|gb|ACS45899.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250527|gb|ACS47466.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793554|gb|ADG33089.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis V9] Length = 365 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 112/319 (35%), Positives = 169/319 (52%), Gaps = 14/319 (4%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 +W N + + L R + L ++ + + D E+A E+ D + + + L+ Sbjct: 28 VWSNPDKMRKLGRRQAQLGTIVNAYRTWLNIRNDLDAAQEMAGEDPDFA---QEAKRLES 84 Query: 95 IKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 E E K +L+ + D + D +E+ AGAGG E+ +A LLRMY R+AEKR + Sbjct: 85 ELPEAEEKLRTALIPRDPDDARDVIMEIKAGAGGEEAALFAGDLLRMYMRYAEKRGWGVT 144 Query: 154 ALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSF 206 + E G+K + I+ P W LK E GVHR+ RI +S R TS Sbjct: 145 IQSENSTELGGVKDVQMAIRAKGNPSPEEGVWASLKYEGGVHRVQRIPVTESQGRIQTSA 204 Query: 207 SSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+THIPTG+VV Q Sbjct: 205 AGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQD 264 Query: 266 ERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 E+SQ +N+A A +L+++L ++ Q+ E A++ S + +IR+Y P + Sbjct: 265 EKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIV 323 Query: 325 DLRTNIEKTSPSDVLDGDL 343 D RTN + + VLDGDL Sbjct: 324 DHRTNYKAYNLDAVLDGDL 342 >gi|224001842|ref|XP_002290593.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335] gi|220974015|gb|EED92345.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335] Length = 282 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 88/231 (38%), Positives = 137/231 (59%), Gaps = 19/231 (8%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK----------RKFKTEALEIHDGEEA 163 S+DA +++ AG GG E+ +A+ +L Y A+ + + E L + + Sbjct: 46 SSDAVIDIRAGTGGDEACLFASEILACYEATAKAGGADESGNGGKSWDLEFLSLSRTDLG 105 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE- 222 GIK A+L++K YG+ + E GVHR+ R+ P + N + TS S+ V P V DS+ E Sbjct: 106 GIKEASLILKQLGPYGFFQYESGVHRVQRV-PVNDN-KLQTSAVSVAVLPSVPDSLIAEA 163 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + ++ +I+T RASGAGGQHVNTT+SAVR+THIPTG++ Q+ERSQHKNKA+A ++ + Sbjct: 164 LPPTELKIETMRASGAGGQHVNTTESAVRVTHIPTGIMAYMQEERSQHKNKAKALKLVAS 223 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 ++Y L+K +E N + + +G G +IR+Y P + D R + Sbjct: 224 RVY--ALRKEQERKNRSAARSSLMGGGDRSERIRTYNF-PQDRITDHRCKV 271 >gi|329116672|ref|ZP_08245389.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020] gi|326907077|gb|EGE53991.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020] Length = 359 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 83/242 (34%), Positives = 135/242 (55%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E GIK ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKFAESQNWRFEVMEATYNGVGGIKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ + P V++ ++ +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEE-VDYQIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVR+ HIPT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRMVHIPTNIKVEMQEERTQQKNRDKAIKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G +D+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|224538310|ref|ZP_03678849.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus DSM 14838] gi|224520095|gb|EEF89200.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus DSM 14838] Length = 370 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 85/246 (34%), Positives = 137/246 (55%), Gaps = 15/246 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A LE+ G GG E+ +A L RMYT++ E + ++ E +++G G K + Sbjct: 112 DSKNAILEIRGGTGGDEAAIFAGDLFRMYTKYCETKGWRMEISSVNEGAAGGFKEVICSV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ ++ I+E + + DT Sbjct: 172 TGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ ++ TG ++++C + R Q KNK +A + LR + Sbjct: 231 FRSGGAGGQNVNKVESGVRLRYVWRNPNTGASEEILIECTETRDQPKNKERALSRLRTFI 290 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK + +I KT + G +IR+Y P + D R N + S +DG Sbjct: 291 YDKEHQKY--LDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDG 347 Query: 342 DLDDFM 347 D+ D + Sbjct: 348 DIQDCI 353 >gi|315047700|ref|XP_003173225.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893] gi|311343611|gb|EFR02814.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893] Length = 438 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 86/248 (34%), Positives = 133/248 (53%), Gaps = 28/248 (11%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG----IKSATLLI 172 +E+ GAGG E+ +A +LRMYT + R +T +E DG AG + + + Sbjct: 152 IEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKMEAEDGAGAGAEDRLSEVVMEV 211 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------------DDSI 219 + P +Y L+ E GVHR+ R+ ++ R HTS S+ + P D + Sbjct: 212 ETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPESNQEDSPLNFDDPNS 271 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + ++ D + + +RASGAGGQHVN T+SAVR+TH+PTG V+ Q RSQH+N+ +AW + Sbjct: 272 DYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHVPTGTVISMQDSRSQHENRRKAWLL 331 Query: 280 LRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 LRAKL + + RE+ +G +KT G G +IR+Y + D R+ + Sbjct: 332 LRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRCT-DHRSGMTVH 388 Query: 334 SPSDVLDG 341 + V+DG Sbjct: 389 NIGKVMDG 396 >gi|322801718|gb|EFZ22324.1| hypothetical protein SINV_03599 [Solenopsis invicta] Length = 300 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/200 (40%), Positives = 122/200 (61%), Gaps = 7/200 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AG GG E+ + L MY +A+ E +++ + GI+ +++I G N Sbjct: 46 IEITAGVGGQEAMLFVKDLYDMYLGYAKYLDLDHEIIDMEVTDNKGIRHVSVIISG-NQV 104 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 + E GVHR+ R+ + SR HTS +S+ + PV + I+I I+E D +I+T R+SGA Sbjct: 105 DKFQHEGGVHRVQRVPATERLSRVHTSTASVAILPVPSE-IQIMINEKDLKIETKRSSGA 163 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAVRITH+P+GV V C+ RSQ KN+ A + L++ LYE +L K+ + Sbjct: 164 GGQHVNTTDSAVRITHLPSGVSVTCEVHRSQDKNRKMAMDKLKSVLYERQLNKQTSFTS- 222 Query: 299 GESSKTEIGWG---RQIRSY 315 E + ++G G +IR+Y Sbjct: 223 -ELRQKQMGMGFRNEKIRTY 241 >gi|189467991|ref|ZP_03016776.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM 17393] gi|189436255|gb|EDV05240.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM 17393] Length = 370 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 87/244 (35%), Positives = 137/244 (56%), Gaps = 15/244 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A LE+ G GG E+ +A L RMYT++ E + +K E +++G G K + Sbjct: 112 DSKNAILEIRGGTGGDEAAIFAGDLFRMYTKFCETKGWKMEISSVNEGAAGGFKEIICSV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ ++ I+E + + DT Sbjct: 172 TGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHI---P-TGV----VVQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ ++ P TGV +++C + R Q KNK +A + LR + Sbjct: 231 FRSGGAGGQNVNKVESGVRLRYVWKNPNTGVSEEILIECTETRDQPKNKERALSRLRTFI 290 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK + +I KT + G +IR+Y P + D R N + + +DG Sbjct: 291 YDKEHQKY--LDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 347 Query: 342 DLDD 345 D+ D Sbjct: 348 DIQD 351 >gi|307198741|gb|EFN79544.1| Peptide chain release factor 1-like, mitochondrial [Harpegnathos saltator] Length = 362 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 120/200 (60%), Gaps = 7/200 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AG GG E+ + L MY +AE E L++ + G ++ T+++ G Sbjct: 109 IEITAGVGGQEAMLFVKNLYEMYIGYAEYLGLCHEVLDMDTTDCNGYRNVTIIVSGKQTS 168 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 + + E GVHR+ R+ + R HTS +S+ + P+ + +EI I+E D +I+T RASG+ Sbjct: 169 KF-RYEGGVHRVQRVPTTEKLGRVHTSTASVAILPIPSE-VEIVINERDLKIETKRASGS 226 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SAVRITHIPTG++V+CQ RSQ +NK A LR +YE +L K+ + Sbjct: 227 GGQHVNKTNSAVRITHIPTGLIVECQVHRSQIRNKKLAMMRLRNMMYEQQLNKQTSFRS- 285 Query: 299 GESSKTEIGWG---RQIRSY 315 E K +IG G ++R+Y Sbjct: 286 -ELRKKQIGMGFRNEKVRTY 304 >gi|283455530|ref|YP_003360094.1| peptide chain release factor 1 [Bifidobacterium dentium Bd1] gi|283102164|gb|ADB09270.1| prfA Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium dentium Bd1] Length = 340 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 106/282 (37%), Positives = 155/282 (54%), Gaps = 18/282 (6%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQD 132 E+A E+ D + E + L+ E+E K +L+ + D + D +E+ AG GG E+ Sbjct: 45 EMASEDPDFA---EEAKRLENELPEIEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAAL 101 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQ 185 +A LLRMY R+AEKR + + E G+K L I+ P W LK E Sbjct: 102 FAGDLLRMYMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEG 161 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ RI +S R TS + + V+P +D EI+I D +ID + +SG GGQ VN Sbjct: 162 GVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVN 221 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TT SAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ EE A + + Sbjct: 222 TTYSAVRMTHIPTGIVVSMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHS 279 Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ +IR+Y P + D RTN + + VLDGDL Sbjct: 280 QVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 320 >gi|255007722|ref|ZP_05279848.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12] gi|313145421|ref|ZP_07807614.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12] gi|313134188|gb|EFR51548.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12] Length = 370 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 111/353 (31%), Positives = 178/353 (50%), Gaps = 22/353 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D V R ++T DP + + L +E + LD+ + KE L + ++ Sbjct: 12 DGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYMQLLANIEEAKDIL 71 Query: 77 LEEDDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQ 131 E D + +E DN Q +L V ++ + LL + D +A LE+ G GG E+ Sbjct: 72 SNESDTDMREMAKEEMDNSQE-RLPVLEEEIKLLLVPADPQDGKNAILEIRGGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHI----PTGV----VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I TGV +++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM-KATLA 352 T + G +IR+Y P + D R N + + +DGD+ + + K T+A Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVA 359 >gi|332213669|ref|XP_003255947.1| PREDICTED: peptide chain release factor 1-like, mitochondrial isoform 3 [Nomascus leucogenys] Length = 344 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 89/201 (44%), Positives = 115/201 (57%), Gaps = 11/201 (5%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ 190 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKE 249 Query: 275 QAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 A LRAKLY + L+ KR+ I SK G +IR+Y P V D R N Sbjct: 250 LAMTKLRAKLYSMHLEEETNKRQNARKIQIGSK---GRSEKIRTYNF-PQNRVTDHRINR 305 Query: 331 EKTSPSDVLDGD--LDDFMKA 349 + GD LD+ +++ Sbjct: 306 TLHDLETFMQGDYLLDELVQS 326 >gi|145627801|ref|ZP_01783602.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21] gi|144979576|gb|EDJ89235.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21] Length = 174 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 71/164 (43%), Positives = 105/164 (64%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L C GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ IK ++ L Sbjct: 7 LQCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQALGKERVSLEQVVNTIKNLEQGL 66 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E +D E L ++ ++E +F + GE D+ D Y+++ AG+G Sbjct: 67 EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFGGEHDACDCYVDLQAGSG 126 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 GTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ Sbjct: 127 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATI 170 >gi|302653122|ref|XP_003018392.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517] gi|291182035|gb|EFE37747.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517] Length = 438 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 87/248 (35%), Positives = 133/248 (53%), Gaps = 28/248 (11%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG----IKSATLLI 172 +E+ GAGG E+ +A +LRMYT + R +T +E DG AG + + + Sbjct: 152 IEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGAEERLSEVVMEV 211 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------------DDSI 219 + P +Y L+ E GVHR+ R+ ++ R HTS S+ + P D + Sbjct: 212 ETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPENNQEDSPLNFDDPNS 271 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG V+ Q RSQH+N+ +AW + Sbjct: 272 DYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRSQHENRRKAWLL 331 Query: 280 LRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 LRAKL + + RE+ +G +KT G G +IR+Y + D R+ + Sbjct: 332 LRAKLAQARREAREQEMMELRRGAMGGVNKT--GRGDKIRTYNFTQSRCT-DHRSGMTVH 388 Query: 334 SPSDVLDG 341 + V+DG Sbjct: 389 NIGKVMDG 396 >gi|320334062|ref|YP_004170773.1| peptide chain release factor 1 [Deinococcus maricopensis DSM 21211] gi|319755351|gb|ADV67108.1| Peptide chain release factor 1 [Deinococcus maricopensis DSM 21211] Length = 362 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 90/254 (35%), Positives = 139/254 (54%), Gaps = 18/254 (7%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +D +E+ AGAGG E+ +A LL MY R+AE K L+ ++ + G+ T + Sbjct: 104 DPHDCIVEIRAGAGGDEAALFAADLLSMYERYAEGAGLKLAVLDANESDLGGLSKVTFEV 163 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A+ + E+GVHR+ R+ ++ R HTS ++ V P V+D+ E+++ S+ RID Sbjct: 164 TGDGAFRAFRFERGVHRVQRVPATETQGRIHTSTVTVAVLPQVEDA-EVDLDLSEVRIDV 222 Query: 233 YRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +R+ GAGGQ VNTTDSAVR + P +VV CQ RSQ KN+ +A +LRA+L E E Sbjct: 223 FRSQGAGGQGVNTTDSAVRAVYRPGTPDEIVVVCQDGRSQIKNREKALVVLRARLAERER 282 Query: 290 QKRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKD--LRTNIEKTSPSDVLDG 341 RE A +G ++E +IR+Y P V D L +++ V+ G Sbjct: 283 AVREAQERADRAAQVGSGDRSE-----KIRTYNY-PQNRVTDHRLSGDVKNFPLETVVAG 336 Query: 342 DLDDFMKATLAIKK 355 L + A + +++ Sbjct: 337 GLAPLIAALVNVER 350 >gi|212716435|ref|ZP_03324563.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM 16992] gi|212660688|gb|EEB21263.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM 16992] Length = 383 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 137/242 (56%), Gaps = 14/242 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A LLRMY R+AEKR + + E G+K L I Sbjct: 125 DARDTIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRGWSVAVQSENTTELGGVKDVQLAI 184 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 + P W LK E GVHR+ RI +S R TS + + V+P +D EIEI Sbjct: 185 RAKGTPAPEDGVWASLKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 244 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + D +ID + +SG GGQ VNTT SAVR+THIPTG+VV Q E+SQ +N+A A +L+++L Sbjct: 245 QKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL 304 Query: 285 YELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 L ++ EE A + +++ +IR+Y P + D RTN + + VLDG Sbjct: 305 --LAMKHEEEAAQAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDG 361 Query: 342 DL 343 DL Sbjct: 362 DL 363 >gi|26346685|dbj|BAC36991.1| unnamed protein product [Mus musculus] Length = 446 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 7/194 (3%) Query: 104 FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E L+ E D +D LEV +G GG Q + + MY ++ + +K E L Sbjct: 172 LERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPA 231 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217 + G+ A I G + Y LK E G+HR+ RI +SR HT S+ V P D+ Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D R+DT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK A Sbjct: 292 -VDVKVDPKDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIAL 350 Query: 278 NMLRAKLYELELQK 291 +LRA+LY+ ++K Sbjct: 351 RVLRARLYQQIIEK 364 >gi|270132345|ref|NP_666072.3| peptide chain release factor 1, mitochondrial precursor [Mus musculus] gi|27151667|sp|Q8K126|RF1M_MOUSE RecName: Full=Peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|20810364|gb|AAH28898.1| Mitochondrial translational release factor 1 [Mus musculus] gi|26336078|dbj|BAC31724.1| unnamed protein product [Mus musculus] gi|148703819|gb|EDL35766.1| mitochondrial translational release factor 1, isoform CRA_a [Mus musculus] Length = 446 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 7/194 (3%) Query: 104 FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E L+ E D +D LEV +G GG Q + + MY ++ + +K E L Sbjct: 172 LERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPA 231 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217 + G+ A I G + Y LK E G+HR+ RI +SR HT S+ V P D+ Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D R+DT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK A Sbjct: 292 -VDVKVDPKDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIAL 350 Query: 278 NMLRAKLYELELQK 291 +LRA+LY+ ++K Sbjct: 351 RVLRARLYQQIIEK 364 >gi|116198067|ref|XP_001224845.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51] gi|88178468|gb|EAQ85936.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51] Length = 400 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 106/334 (31%), Positives = 165/334 (49%), Gaps = 32/334 (9%) Query: 37 QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ--R 94 +N +AK R + L S +KE++ + L+ L+ LE +D + + D+L+ Sbjct: 30 ENDFDAKKAKRAGE-LSRVASAVKELE-KAKAALVELQGLLESNDAEMRELARDDLEATN 87 Query: 95 IKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 +L L+ + D LE+ G GG E + +A+ L +MY + + ++T Sbjct: 88 AQLAESSHNLSVALTPKHPFADMPCLLEIRPGPGGLEGRFFADSLFQMYKAYCSNKGYRT 147 Query: 153 EALEIH----DGE-----EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 ++ DG E ++ A L ++ AYG +GE G+HR+ R+ + + R H Sbjct: 148 RIVQYEASDSDGSTGSEGEIPLQEAVLEVQEEGAYGLFRGEAGMHRVQRVPATEKSGRTH 207 Query: 204 TSFSSIWVYP------VVDDSIEIEISESDCRID-------TYRASGAGGQHVNTTDSAV 250 TS ++WV P D + + ESD ID T RA GAGGQHVN T+SA+ Sbjct: 208 TSAVAVWVLPSFPENGTSDSEADWDKPESDFYIDPNEVRSETMRAGGAGGQHVNKTESAI 267 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIG 307 R+THIPTG V Q RSQ +N+ AW +LR++L + + REE A SS ++I Sbjct: 268 RLTHIPTGTTVSMQDSRSQQRNREDAWRLLRSRLAQQRREAREEQARQLRSSVLANSQIT 327 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 G +IR+Y Q D R+ + + DVL G Sbjct: 328 RGDKIRTYQYQ-QDRCTDHRSGLNTHNLPDVLRG 360 >gi|148703820|gb|EDL35767.1| mitochondrial translational release factor 1, isoform CRA_b [Mus musculus] Length = 440 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 7/194 (3%) Query: 104 FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E L+ E D +D LEV +G GG Q + + MY ++ + +K E L Sbjct: 190 LERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPA 249 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217 + G+ A I G + Y LK E G+HR+ RI +SR HT S+ V P D+ Sbjct: 250 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 309 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D R+DT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK A Sbjct: 310 -VDVKVDPKDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIAL 368 Query: 278 NMLRAKLYELELQK 291 +LRA+LY+ ++K Sbjct: 369 RVLRARLYQQIIEK 382 >gi|297243816|ref|ZP_06927746.1| protein chain release factor A [Gardnerella vaginalis AMD] gi|296888237|gb|EFH26979.1| protein chain release factor A [Gardnerella vaginalis AMD] Length = 365 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 97/240 (40%), Positives = 137/240 (57%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A LLRMY R+AEKR + T + E G+K L I Sbjct: 107 DACDMIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRGWTTVIQSENSTELGGVKDVQLAI 166 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 + P W +K E GVHR+ RI +S R TS + + V+P +D EIEI Sbjct: 167 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 226 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +ID + +SG GGQ VNTT SAVR+THIPTG+VV Q E+SQ +N+A A +L+++L Sbjct: 227 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL 286 Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ Q+ E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 287 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDL 345 >gi|306823422|ref|ZP_07456797.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC 27679] gi|309802666|ref|ZP_07696770.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022] gi|304553129|gb|EFM41041.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC 27679] gi|308220730|gb|EFO77038.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022] Length = 362 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 102/265 (38%), Positives = 144/265 (54%), Gaps = 20/265 (7%) Query: 96 KLEVEYKQFESLLS------GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +LE E +FE L D+ D +E+ AG GG E+ +A LLRMY R+AEKR Sbjct: 81 RLENELPEFEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRG 140 Query: 150 FKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRR 202 + + E G+K L I+ P W LK E GVHR+ RI +S R Sbjct: 141 WAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRIPVTESQGRI 200 Query: 203 HTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 TS + + V+P +D EI+I D +ID + +SG GGQ VNTT SAVR+THIPTG+VV Sbjct: 201 QTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVV 260 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQ 318 Q E+SQ +N+A A +L+++L L ++ EE A + +++ +IR+Y Sbjct: 261 SMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRSERIRTYNF- 317 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDL 343 P + D RTN + + VLDGDL Sbjct: 318 PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|241998776|ref|XP_002434031.1| protein releasing factor, putative [Ixodes scapularis] gi|215495790|gb|EEC05431.1| protein releasing factor, putative [Ixodes scapularis] Length = 356 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 127/217 (58%), Gaps = 5/217 (2%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + LEV AG GG E+ + +L MY R+A + + ++ + G++ A+L + Sbjct: 101 DTTEVLLEVTAGVGGQEAMLFTKDVLDMYVRYASWKGWSCRIVDYETSDMGGVRHASLNV 160 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G +A LK E GVHR+ R+ + R HTS ++ V P+ + +++ ++ D + T Sbjct: 161 GGRDAGKCLKFESGVHRVQRVPQTERAGRIHTSTMAVAVLPLPAE-VDVVLNSKDLVMKT 219 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQHVNTT+SAV+I HIP+G++V+ QERSQ +NK A LRAKLYE+EL K+ Sbjct: 220 KRASGPGGQHVNTTESAVQIQHIPSGIMVESSQERSQLQNKELALKKLRAKLYEIELNKK 279 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 ++ ++ G + RS ++ Y +D T+ Sbjct: 280 TS----SHVTQRKLQVGTRGRSEKIRTYNFAQDRVTD 312 >gi|258566533|ref|XP_002584011.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237907712|gb|EEP82113.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 412 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 23/245 (9%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGEEAG-----IKSATLL 171 +E+ GAGG E+ +A+ LLRMY +R F+T L + DG +G + A + Sbjct: 125 VEIRPGAGGAEASLFASELLRMYLAVCSRRGFRTTILKKDTEDGYGSGGSEDLLSEAVVE 184 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV----DDSIEIEISESD 227 I+ P +Y + E GVHR+ RI ++ R HTS S+ + P D ++ + SD Sbjct: 185 IETPRSYDIFRTEAGVHRVQRIPATEAKGRVHTSAVSVMILPSFPEQNDGALNFDDPNSD 244 Query: 228 CRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+ RASGAGGQHVN T+SAVR+THIPTG VV Q RSQH+N+ +AW +L Sbjct: 245 YYINPQEVQSEKMRASGAGGQHVNKTESAVRLTHIPTGTVVAVQDTRSQHENRRKAWRLL 304 Query: 281 RAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 R+K+ ++ + RE E+ ++G G ++R+Y + D R+ + + S Sbjct: 305 RSKIAQMRREAREQQLVELRRGIMGGVAKMGRGDKVRTYNFGQNRCT-DHRSGMTIHNLS 363 Query: 337 DVLDG 341 DVL+G Sbjct: 364 DVLEG 368 >gi|329957131|ref|ZP_08297698.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056] gi|328523399|gb|EGF50498.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056] Length = 370 Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 88/246 (35%), Positives = 136/246 (55%), Gaps = 15/246 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A LE+ GAGG E+ +A L RMYT++ E + +K + ++G G K + Sbjct: 112 DSRNAILEIRGGAGGDEAAIFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ ++ I+E + + DT Sbjct: 172 TGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ + TGVV ++C + R Q KNK +A + LR + Sbjct: 231 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFI 290 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK I +I KT + G +IR+Y P + D R N + + +DG Sbjct: 291 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 347 Query: 342 DLDDFM 347 D+ D + Sbjct: 348 DIQDCI 353 >gi|297291498|ref|XP_001095577.2| PREDICTED: mitochondrial translational release factor 1-like isoform 2 [Macaca mulatta] Length = 326 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 91/198 (45%), Positives = 116/198 (58%), Gaps = 15/198 (7%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 113 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ 172 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ Sbjct: 173 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNRE 231 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGW-GR--QIRSYVLQPYQMVKDLRTNIE 331 A LRAKLY + L+K E + K +IG GR +IR+Y P V D R I Sbjct: 232 LAMKKLRAKLYSMHLEK--EANKTQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHR--IS 286 Query: 332 KTSPSDVLDGDLDDFMKA 349 KT DL+ FM+ Sbjct: 287 KTL------HDLETFMQG 298 >gi|224283865|ref|ZP_03647187.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB 41171] gi|310287872|ref|YP_003939130.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium bifidum S17] gi|311064752|ref|YP_003971477.1| peptide chain release factor 1 (RF-1) PrfA [Bifidobacterium bifidum PRL2010] gi|313141020|ref|ZP_07803213.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB 41171] gi|309251808|gb|ADO53556.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium bifidum S17] gi|310867071|gb|ADP36440.1| PrfA Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium bifidum PRL2010] gi|313133530|gb|EFR51147.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB 41171] Length = 362 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 103/270 (38%), Positives = 151/270 (55%), Gaps = 14/270 (5%) Query: 87 ETSDNLQRIKLEV---EYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQDWANMLLRMYT 142 E +D +R++ E+ E K +L+ + D + D +E+ AG GG E+ +A LLRMY Sbjct: 74 EFADEAKRLEAELPAAEEKLRNALIPRDPDDARDVIMEIKAGTGGEEAALFAGDLLRMYL 133 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQGVHRLVRISP 195 R+AEKR + + E G+K + I+ P W LK E GVHR+ RI Sbjct: 134 RYAEKRGWAVTVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASLKYEGGVHRVQRIPV 193 Query: 196 YDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+TH Sbjct: 194 TESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTH 253 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIR 313 IPTG+VV Q E+SQ +N+A A +L+++L ++ Q+ E A++ S + +IR Sbjct: 254 IPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSLDRSERIR 313 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +Y P + D RTN + + VLDGDL Sbjct: 314 TYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|109502759|ref|XP_001073018.1| PREDICTED: CG5705-like [Rattus norvegicus] gi|149050030|gb|EDM02354.1| rCG37077, isoform CRA_b [Rattus norvegicus] Length = 446 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 81/194 (41%), Positives = 115/194 (59%), Gaps = 7/194 (3%) Query: 104 FESLLSGE-ADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E L+ E D ++ LEV +G GG Q + + MY ++ + ++ E L Sbjct: 172 LEHLVPKEKCDRSNVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWRFELLNYTPA 231 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217 + G+ A I G + Y LK E G+HR+ RI +SR HT S+ V P D+ Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D R+DT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ KNK A Sbjct: 292 -VDVKVDPRDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIAL 350 Query: 278 NMLRAKLYELELQK 291 +LRA+LY+ ++K Sbjct: 351 RVLRARLYQQIIEK 364 >gi|297622890|ref|YP_003704324.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093] gi|297164070|gb|ADI13781.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093] Length = 373 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 95/243 (39%), Positives = 137/243 (56%), Gaps = 10/243 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ A AGG E+ +A + MY R+AE + FKTE L+ H G + I Sbjct: 103 DDKNVIVEIRAAAGGDEASLFAAEVFEMYRRYAEAQGFKTEVLDSHPSSVGGFSKVSFEI 162 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AY K E GVHR+ R+ ++ R HTS ++ V P +D +++++S +D R+D Sbjct: 163 LGRGAYSKFKFESGVHRVQRVPATETQGRIHTSTVTVAVLPEAED-VDVQLSPADYRVDV 221 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +R+SG GGQ VNTTDSAVRIT+ P +VV CQ +SQ KNK +A +LRA+L E E Sbjct: 222 FRSSGPGGQSVNTTDSAVRITYKPGTSDEIVVTCQDGKSQIKNKEKALAVLRARLLERER 281 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++ A E+ +IG G +IR+Y P + D R + SDVL G LD+ Sbjct: 282 ERAAAEAR--EARLVQIGSGERSEKIRTYNF-PQSRITDHRIGYTTHNLSDVLLGKLDEL 338 Query: 347 MKA 349 +A Sbjct: 339 TEA 341 >gi|225350887|ref|ZP_03741910.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158343|gb|EEG71585.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 362 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 107/282 (37%), Positives = 155/282 (54%), Gaps = 18/282 (6%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD-SNDAYLEVHAGAGGTESQD 132 E+A E+ D + E + L+ VE K +L+ + D + D +E+ AG GG E+ Sbjct: 67 EMASEDPDFA---EEAKRLESELPAVEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAAL 123 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQ 185 +A LLRMY R+AEKR + + E G+K L I+ P W LK E Sbjct: 124 FAGDLLRMYMRYAEKRGWTVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEG 183 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ RI +S R TS + + V+P +D EIEI + D +ID + +SG GGQ VN Sbjct: 184 GVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQSVN 243 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TT SAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ EE A + + Sbjct: 244 TTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEEEAAQAADMRHS 301 Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ +IR+Y P + D RTN + + VLDGDL Sbjct: 302 QVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|82540115|ref|XP_724399.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23479026|gb|EAA15964.1| Peptidyl-tRNA hydrolase domain, putative [Plasmodium yoelii yoelii] Length = 330 Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 92/269 (34%), Positives = 145/269 (53%), Gaps = 38/269 (14%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRW----AEKRKFKTEALEIHDGEEAGIKSATL 170 N L + +G GGTE+ D+ NML MY ++ K+ K E ++I E GIK + Sbjct: 61 NSCSLILSSGTGGTEACDFCNMLYNMYMKYLGKIKNKKNIKYEVIDISKNE-IGIKKVEI 119 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--------------- 215 + G ++ L E+G+HRLVR SP++S +++ TSF + V P + Sbjct: 120 KVDGEYSFYNLISEKGIHRLVRNSPFNSQNKKMTSFVKVDVIPSLSYNDTNIVNFLNINE 179 Query: 216 DDSIEIE------------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 +D+I ++ +++SD I T R+ G GGQ+VN ++AVRI H PT + V+ Sbjct: 180 NDNISLKKNNNMRNMNEMLVNKSDLVIQTMRSGGKGGQNVNKVETAVRIIHKPTNISVKV 239 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSKTEIGWGRQIRSYVLQPYQ 321 ERSQ NK A M+ KL L++ E + N+ S+K+ +G QIR+Y+L + Sbjct: 240 SSERSQILNKRIALKMIYEKLLYLQI---EALKNVKYELSNKSLTHFGEQIRNYILYGNK 296 Query: 322 MVKDLRTNIEKTSPSDVLD-GDLDDFMKA 349 M+KD RTN+ T +L G++D F++A Sbjct: 297 MIKDTRTNVFSTEIDKILSQGEIDIFVEA 325 >gi|326914097|ref|XP_003203364.1| PREDICTED: peptide chain release factor 1, mitochondrial-like [Meleagris gallopavo] Length = 455 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/261 (37%), Positives = 140/261 (53%), Gaps = 15/261 (5%) Query: 102 KQFESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 K F+ L+ E D + LEV AG GG Q + + MY +A+ + + + L Sbjct: 176 KLFQLLVPKEKYDKSHVILEVTAGRTTGGDICQQFTKEMFEMYQNYADYKCWTFDILNYV 235 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVV 215 E G+ A I G + Y LK E G HR+ RI +SR HT S+ V P Sbjct: 236 PAEIGGLHHAAAHISGDDVYRHLKYEGGTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQP 295 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 ++ +++++ D RIDT+RA GAGGQHVN TDSAVRI H+PTGVVV+CQQERSQ NK Sbjct: 296 EE-VDVKVDPKDLRIDTFRAKGAGGQHVNKTDSAVRIVHLPTGVVVECQQERSQQMNKEI 354 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEK 332 A LRAKLY+ ++K +++ + K ++G Q IR+Y V D R + + Sbjct: 355 ALRTLRAKLYQQIIEK--QLSQEQSARKLQLGTRAQSERIRTYNFTQ-DRVTDHRISYDA 411 Query: 333 TSPSDVLDG--DLDDFMKATL 351 + ++L G +LD + L Sbjct: 412 RNIKEILSGKEELDKLINRLL 432 >gi|326478702|gb|EGE02712.1| peptide chain release factor 1 [Trichophyton equinum CBS 127.97] Length = 360 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 34/266 (12%) Query: 53 DNAISFIKEIQDRLCDNLILLEL-ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESL 107 D A I E+Q + + EL +L EDD + L SD L+R + F + Sbjct: 64 DTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSSLSDTLKRAL--IPRHPFADM 121 Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE--ALEIHDGEEAG- 164 +E+ GAGG E+ +A +LRMYT + R +T +E DG AG Sbjct: 122 --------PCLIEIRPGAGGDEAGLFAAKMLRMYTSFCSSRGLRTTIIKMEAEDGVGAGA 173 Query: 165 ---IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV------ 215 + + ++ P +Y L+ E GVHR+ R+ ++ R HTS S+ + P Sbjct: 174 EERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMILPSFPENNQE 233 Query: 216 -------DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 D + + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG V+ Q RS Sbjct: 234 DSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTGTVISMQDSRS 293 Query: 269 QHKNKAQAWNMLRAKLYELELQKREE 294 QH+N+ +AW +LRAKL + + RE+ Sbjct: 294 QHENRRKAWLLLRAKLAQARREAREQ 319 >gi|308235424|ref|ZP_07666161.1| peptide chain release factor 1 [Gardnerella vaginalis ATCC 14018] gi|311114831|ref|YP_003986052.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019] gi|310946325|gb|ADP39029.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019] Length = 365 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 111/322 (34%), Positives = 171/322 (53%), Gaps = 14/322 (4%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLELALEEDDCSILQETSD 90 +P + N + L R L + +S + +LC++ + E+A E++D + +E Sbjct: 28 EPEVASNPDAIRKLGRRHAELGSIVSAYLNYK-QLCEDYEVANEMASEDEDLA--KEAKQ 84 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 ++I E + + D+ D +E+ AG GG E+ +A LLRMY R+AEKR + Sbjct: 85 LEEQIPAAKEKLRTALIPRDPDDARDMIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRGW 144 Query: 151 KTEALEIHDGEEAGIKSATLLIKG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRH 203 T + E G+K L I+ P W +K E GVHR+ RI +S R Sbjct: 145 TTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQ 204 Query: 204 TSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+THIPTG+VV Sbjct: 205 TSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVVS 264 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 Q E+SQ +N+A A +L+++L ++ Q+ E A++ S + +IR+Y P Sbjct: 265 MQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PEN 323 Query: 322 MVKDLRTNIEKTSPSDVLDGDL 343 + D RTN + + VL+GDL Sbjct: 324 RIVDHRTNYKAYNLDQVLNGDL 345 >gi|50730809|ref|XP_417026.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 455 Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/261 (37%), Positives = 140/261 (53%), Gaps = 15/261 (5%) Query: 102 KQFESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 K F+ L+ E D + LEV AG GG Q + + MY +A+ + + + L Sbjct: 176 KLFQLLVPKEKYDKSHVILEVTAGRTTGGDICQQFTKEMFEMYQNYADYKCWTFDILNYV 235 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVV 215 E G+ A I G + Y LK E G HR+ RI +SR HT S+ V P Sbjct: 236 PAEIGGLHHAAAHISGDDVYRHLKYEGGTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQP 295 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 ++ +++++ D RIDT+RA GAGGQHVN TDSAVRI H+PTGVVV+CQQERSQ NK Sbjct: 296 EE-VDVKVDPKDLRIDTFRAKGAGGQHVNKTDSAVRIVHLPTGVVVECQQERSQQMNKEI 354 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEK 332 A LRAKLY+ ++K +++ + K ++G Q IR+Y V D R + + Sbjct: 355 ALRTLRAKLYQQIIEK--QLSQEQSARKLQLGTRAQSERIRTYNFTQ-DRVTDHRISYDA 411 Query: 333 TSPSDVLDG--DLDDFMKATL 351 + ++L G +LD + L Sbjct: 412 RNIKEILSGKEELDKLINRLL 432 >gi|39961534|ref|XP_364694.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15] gi|145011042|gb|EDJ95698.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15] Length = 425 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 127/222 (57%), Gaps = 25/222 (11%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGE-----EAGIKSATLL 171 +E G GG E + + + L +MY + + ++T+ + E DG E ++ A L Sbjct: 133 IEFRPGPGGMEGRLFTDALFKMYQSYCTFKGYRTKTVTYERVDGPPGADGETPLQEAILE 192 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP---------------VVD 216 + P +Y +GE G+HR+ R+ + + R HTS +++WV P V D Sbjct: 193 VINPGSYDIFRGEAGMHRVQRVPATEKSGRIHTSAAAVWVLPSFPEEAGASDEGTTDVND 252 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + + I ++ R++T RA GAGGQHVN T+SA+R+TH+PTG +V Q ERSQ +N+ A Sbjct: 253 PNSDFYIDPTEVRVETMRARGAGGQHVNKTESAIRLTHMPTGTMVSMQDERSQQRNREAA 312 Query: 277 WNMLRAKLYELELQKREEIA-NIGES--SKTEIGWGRQIRSY 315 W +LR+++ + ++REE+A N+ S SK +I G +IR+Y Sbjct: 313 WKVLRSRIAQKRREQREEMAQNLRSSVLSKDKITRGEKIRTY 354 >gi|167948499|ref|ZP_02535573.1| hypothetical protein Epers_18991 [Endoriftia persephone 'Hot96_1+Hot96_2'] gi|110589280|gb|ABG77149.1| hypothetical protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 153 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 64/106 (60%), Positives = 81/106 (76%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 +F + SGE D ++A+L++ AG+GGTE+QDWA MLLRMY RW E FKTE +E GE Sbjct: 10 EFRRMFSGEMDPSNAFLDIQAGSGGTEAQDWAEMLLRMYLRWGEAHGFKTELMEASPGEV 69 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHTSFS+ Sbjct: 70 AGIKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSA 115 >gi|295657325|ref|XP_002789232.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01] gi|226284000|gb|EEH39566.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01] Length = 438 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 85/227 (37%), Positives = 121/227 (53%), Gaps = 35/227 (15%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171 LE+ GAGG E+ +AN LLRMYT + R + L+ G E + A + Sbjct: 150 LELRPGAGGDEAGIFANELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVME 209 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------DDSIEIEIS 224 I+ P +Y L+ E GVHR+ R+ +S R HTS S+ + P D + + Sbjct: 210 IETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAVSVVILPSFPRNGEEGDGELNFDDP 269 Query: 225 ESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 SD ID RASGAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW Sbjct: 270 NSDFYIDPREVNVEKMRASGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAW 329 Query: 278 NMLRAKLYELELQKREE---------IANIGESSKTEIGWGRQIRSY 315 +LRA++ + + REE + +G ++G G +IR+Y Sbjct: 330 QLLRARIAQQRREAREEEMVKLRRGAMGGVG-----KMGRGDKIRTY 371 >gi|119025459|ref|YP_909304.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC 15703] gi|154486885|ref|ZP_02028292.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis L2-32] gi|229470348|sp|A1A0I9|RF1_BIFAA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118765043|dbj|BAF39222.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC 15703] gi|154084748|gb|EDN83793.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis L2-32] Length = 362 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 135/240 (56%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A LLRMY R+AEKR + + E G+K L I Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRGWSVTVQSENTTELGGVKDVQLAI 163 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 + P W LK E GVHR+ RI +S R TS + + V+P +D EIEI Sbjct: 164 RAKGTPAPEDGVWASLKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +ID + +SG GGQ VNTT SAVR+THIPTG+ V Q E+SQ +N+A A +L+++L Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGITVNMQDEKSQIQNRAAALRVLKSRL 283 Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ Q+ E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|225861003|ref|YP_002742512.1| peptide chain release factor 1 [Streptococcus pneumoniae Taiwan19F-14] gi|298230460|ref|ZP_06964141.1| peptide chain release factor 1 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255330|ref|ZP_06978916.1| peptide chain release factor 1 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502960|ref|YP_003724900.1| peptide chain release factor 1 [Streptococcus pneumoniae TCH8431/19A] gi|254790904|sp|C1CRE0|RF1_STRZT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225726985|gb|ACO22836.1| peptide chain release factor 1 [Streptococcus pneumoniae Taiwan19F-14] gi|298238555|gb|ADI69686.1| peptide chain release factor 1 [Streptococcus pneumoniae TCH8431/19A] gi|327389396|gb|EGE87741.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04375] gi|332201491|gb|EGJ15561.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47368] Length = 359 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 133/242 (54%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V V++ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMLEVEE-VEYDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|167765221|ref|ZP_02437334.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC 43183] gi|167696849|gb|EDS13428.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC 43183] Length = 370 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/246 (35%), Positives = 136/246 (55%), Gaps = 15/246 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A LE+ GAGG E+ +A L RMYT++ E + ++ + ++G G K + Sbjct: 112 DSRNAILEIRGGAGGDEAAIFAGDLFRMYTKYCEAKGWRLDISSANEGAAGGFKEIICSV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +S+ V P ++ ++ I+E + + DT Sbjct: 172 TGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ + TGVV ++C + R Q KNK +A + LR + Sbjct: 231 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFI 290 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK I +I KT + G +IR+Y P + D R N + + +DG Sbjct: 291 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 347 Query: 342 DLDDFM 347 D+ D + Sbjct: 348 DIQDCI 353 >gi|23335569|ref|ZP_00120804.1| COG0216: Protein chain release factor A [Bifidobacterium longum DJO10A] gi|189440751|ref|YP_001955832.1| peptide chain release factor 1 [Bifidobacterium longum DJO10A] gi|238692046|sp|B3DR51|RF1_BIFLD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189429186|gb|ACD99334.1| Protein chain release factor A [Bifidobacterium longum DJO10A] Length = 362 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A LLRMYTR+AEKR + + E G+K + I Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAI 163 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 + P W +K E GVHR+ RI +S R TS + + V+P +D EIEI Sbjct: 164 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +ID + +SG GGQ VNTT SAVR+TH+PTG+ V Q E+SQ +N+A A +L+++L Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL 283 Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ Q+ E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|296454711|ref|YP_003661854.1| peptide chain release factor 1 [Bifidobacterium longum subsp. longum JDM301] gi|296184142|gb|ADH01024.1| peptide chain release factor 1 [Bifidobacterium longum subsp. longum JDM301] Length = 362 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A LLRMYTR+AEKR + + E G+K + I Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAI 163 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 + P W +K E GVHR+ RI +S R TS + + V+P +D EIEI Sbjct: 164 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +ID + +SG GGQ VNTT SAVR+TH+PTG+ V Q E+SQ +N+A A +L+++L Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL 283 Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ Q+ E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|329965246|ref|ZP_08302176.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057] gi|328523266|gb|EGF50366.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057] Length = 370 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 108/342 (31%), Positives = 172/342 (50%), Gaps = 21/342 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V R ++T DP + + L +E + L + ++ KE L E+ E Sbjct: 15 VARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQILSGIEEAKEIMANE 74 Query: 80 DDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 D + +E D Q + E+E +Q + LL + DS +A LE+ G GG E+ +A Sbjct: 75 TDPEMREMAREELDTCQSRQPELE-EQIKLLLVPADPQDSRNAILEIRGGTGGDEAAIFA 133 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYT++ E + ++ E ++G G K I G YG +K E GVHR+ R+ Sbjct: 134 GDLFRMYTKYCETKGWRMEISSANEGSAGGFKEIVCSITGDGVYGTMKYESGVHRVQRVP 193 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S VR+ + Sbjct: 194 ATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVRLRY 252 Query: 255 ----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 TGVV ++C + R Q KNK +A + LR +Y+ E QK I +I KT + Sbjct: 253 NWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKTMV 310 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 G +IR+Y P + D R N + + +DGD+ D Sbjct: 311 STGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351 >gi|146161938|ref|XP_001008252.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena thermophila] gi|146146594|gb|EAR88007.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena thermophila SB210] Length = 452 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 86/276 (31%), Positives = 153/276 (55%), Gaps = 17/276 (6%) Query: 83 SILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 ++++E +N +++ E++ + E LL D ++ LEV GAGG+ES +A + +M Sbjct: 155 ALIEEEMENSKQLIDELQDECLEQLLPKGKHDDCSEITLEVRGGAGGSESSLFAEEVFKM 214 Query: 141 YTRWAEKR--KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 Y + ++ +F ++ ++ G K L + G N Y + E GVH+++R+ +S Sbjct: 215 YQAFFAQQGYQFSIDSFQVDMAINKGCKLGVLKVSGTNIYKKMMNESGVHKVIRVPETES 274 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R H+S +I V + ++ ++ E D + + R+ GAGGQHVN +SA R+TH+PTG Sbjct: 275 KGRLHSS--TISVVVMPVVPMDFKVDEKDLKFEFMRSQGAGGQHVNKVESACRVTHLPTG 332 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 + V CQ +R Q +NK +A +L KL+++E++K + + K++IG G +IR+Y Sbjct: 333 ISVLCQDDRQQERNKQRALKLLTEKLFQVEVEKSNQ--QQSDQRKSQIGGGDRSDKIRTY 390 Query: 316 VLQPYQMVKDLRTN-----IEKTSPSDVLDGDLDDF 346 P + D RTN IEK + L+ +D++ Sbjct: 391 NF-PQGRITDHRTNLTLFGIEKMMKGEFLEEFIDEY 425 >gi|213691478|ref|YP_002322064.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254790863|sp|B7GP74|RF1_BIFLI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|213522939|gb|ACJ51686.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457551|dbj|BAJ68172.1| peptide chain release factor [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 362 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A LLRMYTR+AEKR + + E G+K + I Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAI 163 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 + P W +K E GVHR+ RI +S R TS + + V+P +D EIEI Sbjct: 164 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +ID + +SG GGQ VNTT SAVR+TH+PTG+ V Q E+SQ +N+A A +L+++L Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL 283 Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ Q+ E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|23466257|ref|NP_696860.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705] gi|227546609|ref|ZP_03976658.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621640|ref|ZP_04664671.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312134004|ref|YP_004001343.1| prfa [Bifidobacterium longum subsp. longum BBMN68] gi|317482079|ref|ZP_07941103.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA] gi|322689793|ref|YP_004209527.1| peptide chain release factor [Bifidobacterium longum subsp. infantis 157F] gi|322691739|ref|YP_004221309.1| peptide chain release factor [Bifidobacterium longum subsp. longum JCM 1217] gi|81753501|sp|Q8G3P5|RF1_BIFLO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|23327005|gb|AAN25496.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705] gi|227212926|gb|EEI80805.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239515515|gb|EEQ55382.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516325|emb|CBK69941.1| bacterial peptide chain release factor 1 (bRF-1) [Bifidobacterium longum subsp. longum F8] gi|311773307|gb|ADQ02795.1| PrfA [Bifidobacterium longum subsp. longum BBMN68] gi|316916438|gb|EFV37836.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA] gi|320456595|dbj|BAJ67217.1| peptide chain release factor [Bifidobacterium longum subsp. longum JCM 1217] gi|320461129|dbj|BAJ71749.1| peptide chain release factor [Bifidobacterium longum subsp. infantis 157F] Length = 362 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A LLRMYTR+AEKR + + E G+K + I Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVNVQSENTTELGGVKDVQIAI 163 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 + P W +K E GVHR+ RI +S R TS + + V+P +D EIEI Sbjct: 164 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +ID + +SG GGQ VNTT SAVR+TH+PTG+ V Q E+SQ +N+A A +L+++L Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHLPTGITVNMQDEKSQIQNRAAALRVLKSRL 283 Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ Q+ E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|255534225|ref|YP_003094596.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium 3519-10] gi|255340421|gb|ACU06534.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium 3519-10] Length = 361 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/247 (35%), Positives = 136/247 (55%), Gaps = 16/247 (6%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA--LEIHDGEEA--GIKS 167 AD + +E+ AG GG E+ + + R Y + FKT+ EI D EA G K Sbjct: 109 ADDKNVIVELRAGTGGDEAAIFVEDVYRAYAMF-----FKTKGWKHEITDANEASKGYKE 163 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 L ++G YG +K E GVHR+ R+ +S R HTS ++ V P ++ ++ E++ +D Sbjct: 164 LILKVEGEGVYGIMKFESGVHRVQRVPETESQGRVHTSAITVAVLPEAEE-VDFELNPAD 222 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 + T R+ GAGGQ+VN ++ V++TH P+G+VV CQQ RSQ N+ A MLR KLY++ Sbjct: 223 IEMQTSRSGGAGGQNVNKVETKVQLTHKPSGMVVVCQQARSQLANRELAMEMLRTKLYDI 282 Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 ELQ+ + +I KT + G +I++Y P V D R N + ++GD+ Sbjct: 283 ELQRVQ--GDIAAQRKTMVSTGDRSAKIKTYNY-PQGRVTDHRVNKSVYNLDAYMNGDIQ 339 Query: 345 DFMKATL 351 + + A + Sbjct: 340 EMIDAVI 346 >gi|198276935|ref|ZP_03209466.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135] gi|198270460|gb|EDY94730.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135] Length = 369 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/343 (29%), Positives = 171/343 (49%), Gaps = 20/343 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V R ++T DP++ + L +E + L + ++ KE + + L ++ + E Sbjct: 15 VSRFEEVSTLITDPNVIADQKRYVKLTKEYKELGDLMAARKEYL-QCINGLEEAKMMMSE 73 Query: 80 DDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + +E + RI E + + + D +A LE+ G GG E+ +A Sbjct: 74 NDPEMKEMAREEAASCEARIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAAIFAG 133 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+++ E + +K E ++G G K + G YG LK E GVHR+ R+ Sbjct: 134 DLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSVTGEKVYGTLKYESGVHRVQRVPA 193 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI--- 252 ++ R HTS +S+ V P + ++EI+E + + DT+R+ GAGGQ+VN +S VR+ Sbjct: 194 TETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDTFRSGGAGGQNVNKVESGVRLRYN 252 Query: 253 -----THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 T I ++++C + R Q KNK +A + LR +Y+ E QK I +I KT + Sbjct: 253 WKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKTMVS 310 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G +IR+Y P + D R N + + +DGD+ D + Sbjct: 311 TGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCI 352 >gi|332299913|ref|YP_004441834.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM 20707] gi|332176976|gb|AEE12666.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM 20707] Length = 368 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 132/251 (52%), Gaps = 17/251 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ AG GG E+ +A L RMY+R+ E + + +G G K L + Sbjct: 110 DDKNAILELRAGTGGDEAALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNV 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ I+E + + DT Sbjct: 170 TGTGVYGTLKYESGVHRVQRVPQTETQGRIHTSAATVAVLPEA-DKFEVNINEGEIKWDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIP-----TGVV----VQCQQERSQHKNKAQAWNMLRAK 283 +R+SGAGGQ+VN +S VR+ H P TGVV ++C + R Q KNK +A + LR Sbjct: 229 FRSSGAGGQNVNKVESGVRL-HYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTF 287 Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 +Y+ E QK I I KT + G +IR+Y P V D R + + VL Sbjct: 288 IYDKEHQKY--IDEIASRRKTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLG 344 Query: 341 GDLDDFMKATL 351 GDL + A + Sbjct: 345 GDLQPIIDALI 355 >gi|313886402|ref|ZP_07820124.1| peptide chain release factor 1 [Porphyromonas asaccharolytica PR426713P-I] gi|312924148|gb|EFR34935.1| peptide chain release factor 1 [Porphyromonas asaccharolytica PR426713P-I] Length = 368 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 132/251 (52%), Gaps = 17/251 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ AG GG E+ +A L RMY+R+ E + + +G G K L + Sbjct: 110 DDKNAILELRAGTGGDEAALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNV 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ I+E + + DT Sbjct: 170 TGTGVYGTLKYESGVHRVQRVPQTETQGRIHTSAATVAVLPEA-DKFEVNINEGEIKWDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIP-----TGVV----VQCQQERSQHKNKAQAWNMLRAK 283 +R+SGAGGQ+VN +S VR+ H P TGVV ++C + R Q KNK +A + LR Sbjct: 229 FRSSGAGGQNVNKVESGVRL-HYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTF 287 Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 +Y+ E QK I I KT + G +IR+Y P V D R + + VL Sbjct: 288 IYDKEHQKY--IDEIASRRKTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLG 344 Query: 341 GDLDDFMKATL 351 GDL + A + Sbjct: 345 GDLQPIIDALI 355 >gi|317033212|ref|XP_001395081.2| peptide chain release factor 1 [Aspergillus niger CBS 513.88] Length = 429 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 147/293 (50%), Gaps = 34/293 (11%) Query: 72 LLELALEEDDCS--ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L LA+E+ + S L +DNL+ K + F L LE+ GAGG E Sbjct: 109 LRSLAVEDLESSKIALPAIADNLK--KALIPRHPFADL--------PCLLEIRPGAGGDE 158 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGE-EAGIKSATLLIKGPNAYGWLKGEQG 186 + +A +LRMY + +R F+ + ++ DG + + A L + AY L+ E G Sbjct: 159 AGLFAFEVLRMYIAFCSRRGFRYSIIKQDVADGPAQDRLSEAVLEVDADGAYDILRTESG 218 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPV-------VDDSIEIEISESD-------CRIDT 232 VHR+ R+ ++ R HTS S+ + P +D S+ E SD R + Sbjct: 219 VHRVQRVPATEAKGRTHTSAVSVMILPSFPDSGSGLDSSLNFEDPNSDYYVDPQEVRTEK 278 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RA GAGGQHVN T+SA+R+THIPTG VV Q RSQH N+ +AW +LRA+L E + R Sbjct: 279 MRAGGAGGQHVNKTESAIRLTHIPTGTVVSMQDSRSQHANRKKAWQVLRARLAEARREAR 338 Query: 293 E-EIANIGESSK---TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 E E+ N+ + +G G +IR+Y D R+ + + VLDG Sbjct: 339 EQELVNLRRGAMGGVARMGRGDKIRTYNYG-QNRCTDHRSGLTIHNLDSVLDG 390 >gi|228470795|ref|ZP_04055643.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3] gi|228307468|gb|EEK16473.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3] Length = 368 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 92/251 (36%), Positives = 132/251 (52%), Gaps = 17/251 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ AG GG E+ +A L RMY+R+ E + + +G G K L + Sbjct: 110 DDKNAILELRAGTGGDEAALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNV 169 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ I+E + + DT Sbjct: 170 TGTGVYGTLKYESGVHRVQRVPQTETQGRIHTSAATVAVLPEA-DKFEVNINEGEIKWDT 228 Query: 233 YRASGAGGQHVNTTDSAVRITHIP-----TGVV----VQCQQERSQHKNKAQAWNMLRAK 283 +R+SGAGGQ+VN +S VR+ H P TGVV ++C + R Q KNK +A + LR Sbjct: 229 FRSSGAGGQNVNKVESGVRL-HYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTF 287 Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 +Y+ E QK I I KT + G +IR+Y P V D R + + VL Sbjct: 288 IYDKEHQKY--IDEIASRRKTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLG 344 Query: 341 GDLDDFMKATL 351 GDL + A + Sbjct: 345 GDLQPIIDALI 355 >gi|225559538|gb|EEH07820.1| peptide chain release factor 1 [Ajellomyces capsulatus G186AR] Length = 438 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 29/224 (12%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171 LE+ GAGG E+ +AN LLRMYT + R +T L+ + G E + A + Sbjct: 150 LELRPGAGGEEAGIFANELLRMYTMFCSNRSLRTTLLKKECENAGANGGSEDRLIEAVME 209 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---EIEISESDC 228 I+ P +Y L+ E GVHR+ R+ ++ R HTS S+ + P +I + E++ D Sbjct: 210 IETPGSYETLRTEAGVHRVQRVPTTENKGRTHTSAVSVVILPSFSSNIGEGDSELNFDDP 269 Query: 229 RIDTY-----------RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 D Y RA GAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW Sbjct: 270 NSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAW 329 Query: 278 NMLRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSY 315 ++LRA++ + + REE +G +K +G G +IR+Y Sbjct: 330 HLLRARIAQQRREAREEEMVKLRRGVMGGVAK--MGRGDKIRTY 371 >gi|160891026|ref|ZP_02072029.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492] gi|270294364|ref|ZP_06200566.1| peptide chain release factor 1 [Bacteroides sp. D20] gi|317480970|ref|ZP_07940050.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36] gi|156859247|gb|EDO52678.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492] gi|270275831|gb|EFA21691.1| peptide chain release factor 1 [Bacteroides sp. D20] gi|316902863|gb|EFV24737.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36] Length = 370 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 106/342 (30%), Positives = 171/342 (50%), Gaps = 21/342 (6%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V R ++T DP + + L +E + L + ++ KE L E+ E Sbjct: 15 VARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLGGIEEAKEIIANE 74 Query: 80 DDCSI---LQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWA 134 D + +E D Q + E+E +Q + LL + D +A LE+ G GG E+ +A Sbjct: 75 TDQEMREMAREELDACQTRQPELE-EQIKLLLVPADPQDGRNAILEIRGGTGGDEAAIFA 133 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYT++ E + ++ E ++G G K + G N YG LK E GVHR+ R+ Sbjct: 134 GDLFRMYTKYCESKGWRMEISSANEGAAGGFKEIVCSVTGDNVYGTLKYESGVHRVQRVP 193 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-- 252 ++ R HTS +S+ V P ++ ++ I+E + + DT+R+ GAGGQ+VN +S VR+ Sbjct: 194 ATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDTFRSGGAGGQNVNKVESGVRLRY 252 Query: 253 ------THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 T I ++++C + R Q KNK +A + LR +Y+ E QK I +I KT + Sbjct: 253 NWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKTMV 310 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 G +IR+Y P + D R N + + +DGD+ D Sbjct: 311 STGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQD 351 >gi|291457338|ref|ZP_06596728.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213] gi|291381173|gb|EFE88691.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213] Length = 362 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 94/240 (39%), Positives = 136/240 (56%), Gaps = 10/240 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ D +E+ AG GG E+ +A LLRMYTR+AEKR + + E G+K + I Sbjct: 104 DARDTIMEIKAGTGGEEAALFAGDLLRMYTRYAEKRGWSVNIQSENTTELGGVKDVQIAI 163 Query: 173 KG-----PNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 + P W +K E GVHR+ RI +S R TS + + V+P +D EIEI Sbjct: 164 RAKGTPAPEDGVWASMKYEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEID 223 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +ID + +SG GGQ VNTT SAVR+TH+PTG+ V Q E+SQ +N+A A +L+++L Sbjct: 224 PKDLKIDIFMSSGPGGQSVNTTYSAVRMTHLPTGITVNMQDEKSQIQNRASALRVLKSRL 283 Query: 285 YELEL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ Q+ E A++ S + +IR+Y P + D RTN + + VLDGDL Sbjct: 284 LAMKHEQEAAEAADMRHSQVRSLDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 342 >gi|325300471|ref|YP_004260388.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170] gi|324320024|gb|ADY37915.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170] Length = 370 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 87/246 (35%), Positives = 133/246 (54%), Gaps = 15/246 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ G GG E+ +A L RMY+++ E++ +K E +G G K + Sbjct: 112 DDRNAILEIRGGTGGDEAAIFAGDLFRMYSKYCERKGWKLEVSSASEGASGGFKEIICSV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +S+ V P + ++EI+E + + DT Sbjct: 172 TGDKVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284 +R+SGAGGQ+VN +S VR+ + TGVV ++C + R Q KNK +A LR + Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALARLRTFI 290 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK I +I KT + G +IR+Y P + D R N + + +DG Sbjct: 291 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 347 Query: 342 DLDDFM 347 D+ D + Sbjct: 348 DIQDCI 353 >gi|307176123|gb|EFN65821.1| Peptide chain release factor 1-like, mitochondrial [Camponotus floridanus] Length = 412 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 85/243 (34%), Positives = 136/243 (55%), Gaps = 21/243 (8%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AG GG E+ + L MY +A+ E +++ + GI+ ++L+ G Y Sbjct: 158 IEITAGVGGQEAMLFVKDLYEMYMGYAKYLDLTHEVIDMETNDNNGIRHVSILLSGDETY 217 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 L+ E GVHR+ RI + + R HTS +S+ + P ++I I++ D +I+T RASGA Sbjct: 218 K-LQYEGGVHRVQRIPATERSGRVHTSTASVAILPT-PSKVQIVINDKDLKIETKRASGA 275 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAVRI ++P+G+ V CQ RSQ KNK A LR+ LYE +L K+ I Sbjct: 276 GGQHVNTTDSAVRIIYLPSGLSVSCQMHRSQIKNKEVAMIKLRSILYEQQLNKQTTF--I 333 Query: 299 GESSKTEIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG---DLDDFMKATLA 352 E + ++G ++R+Y N ++ + + +G +L +FM+ +A Sbjct: 334 SELRQKQMGMKSRNEKVRTY-----------NYNQDRVTDHRLQNGTMYNLPEFMQGGVA 382 Query: 353 IKK 355 ++K Sbjct: 383 LEK 385 >gi|134079787|emb|CAK40922.1| unnamed protein product [Aspergillus niger] Length = 462 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 120/218 (55%), Gaps = 21/218 (9%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDGE-EAGIKSATLLIKGP 175 LE+ GAGG E+ +A +LRMY + +R F+ + ++ DG + + A L + Sbjct: 181 LEIRPGAGGDEAGLFAFEVLRMYIAFCSRRGFRYSIIKQDVADGPAQDRLSEAVLEVDAD 240 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-------VDDSIEIEISESD- 227 AY L+ E GVHR+ R+ ++ R HTS S+ + P +D S+ E SD Sbjct: 241 GAYDILRTESGVHRVQRVPATEAKGRTHTSAVSVMILPSFPDSGSGLDSSLNFEDPNSDY 300 Query: 228 ------CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 R + RA GAGGQHVN T+SA+R+THIPTG VV Q RSQH N+ +AW +LR Sbjct: 301 YVDPQEVRTEKMRAGGAGGQHVNKTESAIRLTHIPTGTVVSMQDSRSQHANRKKAWQVLR 360 Query: 282 AKLYELELQKRE-EIANIGESSK---TEIGWGRQIRSY 315 A+L E + RE E+ N+ + +G G +IR+Y Sbjct: 361 ARLAEARREAREQELVNLRRGAMGGVARMGRGDKIRTY 398 >gi|325856854|ref|ZP_08172352.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A] gi|327314543|ref|YP_004329980.1| peptide chain release factor 1 [Prevotella denticola F0289] gi|325483227|gb|EGC86204.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A] gi|326945459|gb|AEA21344.1| peptide chain release factor 1 [Prevotella denticola F0289] Length = 370 Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 161/318 (50%), Gaps = 25/318 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ N ++ IKE +D + + + + E+A EE L E + +I+ E+ Sbjct: 50 IMDARRRYVNCLTTIKEAKDIIANESDAEMKEMAREE-----LSENEELQPKIEEEI--- 101 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + + D + +E+ GAGG E+ +A L MY R+ +K+ +K + +G Sbjct: 102 KLLLVPKDPEDGKNVQMEIRGGAGGDEAALFAGDLFNMYKRYCDKKGWKLSVTSVSEGAV 161 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K ++G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 162 GGFKEIDFAVEGENVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274 I+E D + DT+R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKE 280 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A + L +Y+ E QK I +I KT + G +IR+Y P V D R Sbjct: 281 RALSRLYTYIYDHEHQKY--IDDIASRRKTLVSTGDRSAKIRTYNF-PQGRVTDHRIGFT 337 Query: 332 KTSPSDVLDGDLDDFMKA 349 ++GD+ + + A Sbjct: 338 THDLQGFMNGDIQEMIDA 355 >gi|327357433|gb|EGE86290.1| peptide chain release factor 1 [Ajellomyces dermatitidis ATCC 18188] Length = 438 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 105/321 (32%), Positives = 160/321 (49%), Gaps = 48/321 (14%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---LLELALEEDDCSIL 85 +T DP + E R + ++A I E+ + L D L LALE+ L Sbjct: 65 ETFDPKTAKRAGELATTARALKKWEDANETIAELNNLLKDPSTDSELHSLALED-----L 119 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRW 144 Q T+ +L + ++ ++L+ ++ LE+ GAGG E+ +AN LLRMYT + Sbjct: 120 QSTTTSLAILSTNLK----QALIPRHPFADLPCLLELRPGAGGEEAGIFANELLRMYTMF 175 Query: 145 AEKR-------KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 R K ++E G E + A + I+ P +Y L+ E GVHR+ R+ + Sbjct: 176 CSNRGLHVTLLKKESENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVHRVQRVPATE 235 Query: 198 SNSRRHTSFSSIWVYPVV-------DDSIEIEISESDCRIDT-------YRASGAGGQHV 243 S R HTS S+ + P D + + SD ID RA GAGGQHV Sbjct: 236 SKGRTHTSAVSVVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHV 295 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE--------- 294 N T+SA+R+THIPTG+VV Q RSQH+N+ +AW++LRA++ + + REE Sbjct: 296 NKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREEEMVKLRRGA 355 Query: 295 IANIGESSKTEIGWGRQIRSY 315 + +G ++G G +IR+Y Sbjct: 356 MGGVG-----KMGRGDKIRTY 371 >gi|156094764|ref|XP_001613418.1| peptide chain release factor [Plasmodium vivax SaI-1] gi|148802292|gb|EDL43691.1| peptide chain release factor, putative [Plasmodium vivax] Length = 334 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 141/273 (51%), Gaps = 44/273 (16%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK----FKTEALEIHDGEEAGIKSATL 170 N L + +G GGTE+ D+ +ML MY ++ K K K E +++ E GIK + Sbjct: 63 NSCSLILSSGTGGTEACDFCSMLYNMYMKYLSKLKNKKNIKYEVIDLSKNE-VGIKKVEI 121 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV---DDSI-------- 219 I G ++ E+G+HR+VR SP+++ +++ TSF + V P + D ++ Sbjct: 122 KIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKKMTSFVKVDVIPTLSYNDTNVINFLNIAE 181 Query: 220 ------------------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 EI +++SD I T R+ G GGQ+VN ++AVRI H PT + V Sbjct: 182 SSSPSVKKNMNSRNINVNEIALNKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISV 241 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVL 317 + ERSQ NK A + KL L+L+ K+ E +N K+ +G QIR+Y+L Sbjct: 242 KVSSERSQILNKRIALKTIYEKLLYLQLEALKNKKYEFSN-----KSLTHFGEQIRNYIL 296 Query: 318 QPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKA 349 +M+KD RTN+ T VL G+++ F+ A Sbjct: 297 YGNKMIKDTRTNVSSTDVDRVLSQGEIELFVDA 329 >gi|189461883|ref|ZP_03010668.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136] gi|189431477|gb|EDV00462.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136] Length = 369 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 15/244 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ G GG E+ +A L RMY+++ E + +K E ++G G K + Sbjct: 111 DDRNAILEIRGGTGGDEAAIFAGDLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +S+ V P + ++EI+E + + DT Sbjct: 171 TGDKVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDT 229 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ + TGVV ++C + R Q KNK +A + LR + Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFI 289 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK I +I KT + G +IR+Y P + D R N + + +DG Sbjct: 290 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 346 Query: 342 DLDD 345 D+ D Sbjct: 347 DIQD 350 >gi|68072219|ref|XP_678023.1| peptide chain release factor [Plasmodium berghei strain ANKA] gi|56498354|emb|CAH99275.1| peptide chain release factor, putative [Plasmodium berghei] Length = 329 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 92/269 (34%), Positives = 145/269 (53%), Gaps = 39/269 (14%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRW----AEKRKFKTEALEIHDGEEAGIKSATL 170 N L + +G GGTE+ D+ NML MY ++ K+ K E ++I E GIK + Sbjct: 61 NSCSLILSSGTGGTEACDFCNMLYNMYMKYLGKIKNKKYIKYEVIDISKNE-IGIKKVEI 119 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--------------- 215 + G ++ L E+G+HRLVR SP++S +++ TSF + V P + Sbjct: 120 KVDGEYSFYNLISEKGIHRLVRNSPFNSQNKKMTSFVKVDVIPSLSYNDTNIVNFLNINE 179 Query: 216 DDSIEIE------------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 +D+I ++ +++SD I T R+ G GGQ+VN ++AVRI H PT + V+ Sbjct: 180 NDNISLKKNNNMRNMNEMLVNKSDLVIQTMRSGGKGGQNVNKVETAVRIIHKPTNISVKV 239 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE--SSKTEIGWGRQIRSYVLQPYQ 321 ERSQ NK A M+ LY L++ E + N+ S+K+ +G QIR+Y+L + Sbjct: 240 SSERSQILNKRIALKMIEKLLY-LQI---EALKNVKYELSNKSLTHFGEQIRNYILYGNK 295 Query: 322 MVKDLRTNIEKTSPSDVLD-GDLDDFMKA 349 M+KD RTN+ T +L G++D F++A Sbjct: 296 MIKDTRTNVFSTEIDKILSQGEIDIFVEA 324 >gi|261188569|ref|XP_002620699.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081] gi|239593183|gb|EEQ75764.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081] gi|239613247|gb|EEQ90234.1| peptide chain release factor 1 [Ajellomyces dermatitidis ER-3] Length = 438 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 105/321 (32%), Positives = 160/321 (49%), Gaps = 48/321 (14%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---LLELALEEDDCSIL 85 +T DP + E R + ++A I E+ + L D L LALE+ L Sbjct: 65 ETFDPKTAKRAGELATTARALKKWEDANETIAELNNLLKDPSTDSELHSLALED-----L 119 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANMLLRMYTRW 144 Q T+ +L + ++ ++L+ ++ LE+ GAGG E+ +AN LLRMYT + Sbjct: 120 QSTTTSLAILSTNLK----QALIPRHPFADLPCLLELRPGAGGEEAGIFANELLRMYTMF 175 Query: 145 AEKR-------KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 R K ++E G E + A + I+ P +Y L+ E GVHR+ R+ + Sbjct: 176 CSNRGLHVTLLKKESENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVHRVQRVPATE 235 Query: 198 SNSRRHTSFSSIWVYPVV-------DDSIEIEISESDCRIDT-------YRASGAGGQHV 243 S R HTS S+ + P D + + SD ID RA GAGGQHV Sbjct: 236 SKGRTHTSAVSVVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMRAGGAGGQHV 295 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE--------- 294 N T+SA+R+THIPTG+VV Q RSQH+N+ +AW++LRA++ + + REE Sbjct: 296 NKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREEEMVKLRRGA 355 Query: 295 IANIGESSKTEIGWGRQIRSY 315 + +G ++G G +IR+Y Sbjct: 356 MGGVG-----KMGRGDKIRTY 371 >gi|224026398|ref|ZP_03644764.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM 18228] gi|224019634|gb|EEF77632.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM 18228] Length = 369 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 15/244 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ G GG E+ +A L RMY+++ E + +K E ++G G K + Sbjct: 111 DDRNAILEIRGGTGGDEAAIFAGDLFRMYSKYCESKGWKLEVSNANEGAAGGFKEIICSV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +S+ V P + ++EI+E + + DT Sbjct: 171 TGDKVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDT 229 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ + TGVV ++C + R Q KNK +A + LR + Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFI 289 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK I +I KT + G +IR+Y P + D R N + + +DG Sbjct: 290 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 346 Query: 342 DLDD 345 D+ D Sbjct: 347 DIQD 350 >gi|19113899|ref|NP_592987.1| mitochondrial peptide chain release factor (predicted) [Schizosaccharomyces pombe 972h-] gi|1172908|sp|Q09691|RF1M_SCHPO RecName: Full=Putative peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|1052800|emb|CAA90504.1| mitochondrial peptide chain release factor (predicted) [Schizosaccharomyces pombe] Length = 396 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 106/319 (33%), Positives = 166/319 (52%), Gaps = 20/319 (6%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEV 99 AK + R R+ + NA S K + +++ D L ++ +E D + + I K+ Sbjct: 69 AKRIARLRR-VHNAYSKFKSLSEQISD---LKQMEAQESDAEVKMMAVTEINEISNKIPK 124 Query: 100 EYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR----KFKTE 153 + E+ L +ADS A +E+ G GGTE+ +AN L+ MY ++A + KF ++ Sbjct: 125 SIEDLENTLLPQADSYALPALIEIRPGVGGTEAAIFANELVEMYFQYANFKGWNCKFISK 184 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + G EA I A I+G AYG L E GVHR+ R ++ R HTS +S+ V P Sbjct: 185 SAV--QGLEA-ITEAIFSIEGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTASVIVLP 241 Query: 214 -VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 V +D S+ +I+ R+ GAGGQHVN T+SAVR+THIPTG+ V Q RSQH+N Sbjct: 242 QVSNDESSSLYDSSEVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQN 301 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 K +A+ +L ++L L K E + ++ T ++R+Y + V D R + Sbjct: 302 KEKAFLVLNSRLAALNAAKENEAERLKRKNQVTSSDRSEKLRTYNFNQNR-VTDHRIGLS 360 Query: 332 KTSPSDVLDGD--LDDFMK 348 S + G+ D+F++ Sbjct: 361 MHDLSTFMQGEEKFDEFLE 379 >gi|325269739|ref|ZP_08136350.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608] gi|324987940|gb|EGC19912.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608] Length = 370 Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 103/318 (32%), Positives = 163/318 (51%), Gaps = 25/318 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ N ++ IKE +D + + + + E+A EE L E ++ LQ K+E E K Sbjct: 50 IMDARRRYVNCLTTIKEAKDIIANESDAEMKEMAREE-----LSE-NEGLQP-KIEEEIK 102 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 E D + +E+ GAGG E+ +A L MY R+ +K+ +K + +G Sbjct: 103 LLLVPKDPE-DGKNVQMEIRGGAGGDEAALFAGDLFNMYKRYCDKKGWKLSVTSVSEGAV 161 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K ++G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 162 GGFKEIDFAVEGENVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274 I+E D + DT+R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKE 280 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A + L +Y+ E QK I +I KT + G +IR+Y P V D R Sbjct: 281 RALSRLYTYIYDHEHQKY--IDDIASRRKTLVSTGDRSAKIRTYNF-PQGRVTDHRIGFT 337 Query: 332 KTSPSDVLDGDLDDFMKA 349 ++GD+ + + A Sbjct: 338 THDLQGFMNGDIQEMIDA 355 >gi|321264047|ref|XP_003196741.1| peptide chain release factor 1, mitochondrial precursor [Cryptococcus gattii WM276] gi|317463218|gb|ADV24954.1| Peptide chain release factor 1, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 476 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 96/250 (38%), Positives = 135/250 (54%), Gaps = 19/250 (7%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE----IHDGEEAGIKSAT 169 S A + ++AG GG ES L RMY R+A R +K E + GI+ T Sbjct: 206 SLPAVMSLNAGVGGLESALCTEDLARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELT 265 Query: 170 LLIKGPN-------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 + + P YG L+ E+GVHR+ R+ ++ R HTS ++ V P+ D+ E Sbjct: 266 VKFEPPQYAEEGTEVYGALQWEKGVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAP 325 Query: 223 -ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 + D RID RA GAGGQHVN T+SAVR+THIPTG+ V Q RSQH+N+A AW +LR Sbjct: 326 LVDPKDVRIDVMRARGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQNRAWAWEILR 385 Query: 282 AKLYELELQKREEIANIGESSKTEI-GWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 A+L E + EE+ S + ++ G R +IR+Y ++ D R I T V Sbjct: 386 ARLS--EKKHNEEVEARRASRRDQVKGADRSDKIRTYNFNQDRLT-DHRFGITVTGLQRV 442 Query: 339 LDGD-LDDFM 347 LDG+ L+D + Sbjct: 443 LDGEGLEDVI 452 >gi|194398144|ref|YP_002037655.1| peptide chain release factor 1 [Streptococcus pneumoniae G54] gi|238690818|sp|B5E4D9|RF1_STRP4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194357811|gb|ACF56259.1| peptide chain release factor 1 [Streptococcus pneumoniae G54] Length = 359 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 133/242 (54%), Gaps = 11/242 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL MY ++AE + ++ E +E G K ++ Sbjct: 109 DDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMV 168 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS +++ V P V+ +E +I D R+D Sbjct: 169 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE-EVEXDIDPKDLRVDI 227 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 228 YHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIA 287 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ IG G +IR+Y P V D R + +L G LD+ + Sbjct: 288 QDEQDA----ERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVV 342 Query: 348 KA 349 A Sbjct: 343 DA 344 >gi|296422823|ref|XP_002840958.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637185|emb|CAZ85149.1| unnamed protein product [Tuber melanosporum] Length = 309 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 19/215 (8%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHDGEEAG--IKSATLLIK 173 A +E+ G GG+E+ +A LL++YT + A R + + + G E G ++ A ++ Sbjct: 48 ALVEIRPGTGGSEASLFAGDLLKLYTMYCANIRNWPLSMVSLTAGAEGGDGVQEAIFEVE 107 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES------- 226 AY +GE GVHR+ R+ + R HTS ++ V P E+++ E Sbjct: 108 ASGAYEIFRGEAGVHRVQRVPATEKQGRTHTSTVNVVVLPSFP---EVQLGEGEEDPDSI 164 Query: 227 ----DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 D R+D RA GAGGQHVNTTDSAVR+THIPTG+V Q RSQHKN+A+A +L++ Sbjct: 165 IDMKDVRVDVMRARGAGGQHVNTTDSAVRMTHIPTGIVAAIQDSRSQHKNRAKAMVVLKS 224 Query: 283 KLYELELQKR--EEIANIGESSKTEIGWGRQIRSY 315 ++ E +R EE+A +K G ++R+Y Sbjct: 225 RIAEKRRAEREAEELALRRSVAKVNAGRSDKMRTY 259 >gi|298711208|emb|CBJ32429.1| peptide chain release factor 1 [Ectocarpus siliculosus] Length = 448 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 138/244 (56%), Gaps = 11/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AG GG E+ WA LL +Y ++A ++ + + +E E G ++ + Sbjct: 185 DDRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEV 244 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G Y LK E GVHR+ R+ ++ R HTS +++ + P VD+ + + I D I T Sbjct: 245 NGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDE-VAVNIRPEDIEIKT 303 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ G+GGQ+VN +SAV + H PTG+ + C QERSQ KN+ A +LR+++Y++EL+K+ Sbjct: 304 ARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQ 363 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN---IEKTSP-SDVLDGD-LDDFM 347 + A + K ++G G RS ++ Y KD R + I K P ++ L G LDD + Sbjct: 364 Q--AETSGNRKAQVGSGS--RSEKIRTYNW-KDSRCSDHRIGKNFPLNNFLSGSGLDDMI 418 Query: 348 KATL 351 A + Sbjct: 419 GACI 422 >gi|212690981|ref|ZP_03299109.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855] gi|237712531|ref|ZP_04543012.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA] gi|237726705|ref|ZP_04557186.1| peptide chain release factor 1 [Bacteroides sp. D4] gi|265752224|ref|ZP_06088017.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA] gi|212666213|gb|EEB26785.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855] gi|229435231|gb|EEO45308.1| peptide chain release factor 1 [Bacteroides dorei 5_1_36/D4] gi|229453852|gb|EEO59573.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA] gi|263237016|gb|EEZ22486.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA] Length = 371 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 132/246 (53%), Gaps = 15/246 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ G GG E+ +A L RMY+++ E + +K E ++G G K + Sbjct: 113 DDRNAILEIRGGTGGDEAAIFAGDLFRMYSKYCETKGWKLEVSSANEGAAGGFKEIICSV 172 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +S+ V P + ++EI+E + + DT Sbjct: 173 TGDKVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDT 231 Query: 233 YRASGAGGQHVNTTDSAVRI--------THIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ T I ++++C + R Q KNK +A + LR + Sbjct: 232 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFI 291 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK I +I KT + G +IR+Y P + D R N + + +DG Sbjct: 292 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 348 Query: 342 DLDDFM 347 D+ D + Sbjct: 349 DIQDCI 354 >gi|325089543|gb|EGC42853.1| peptide chain release factor 1 [Ajellomyces capsulatus H88] Length = 438 Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 29/224 (12%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171 LE+ GAGG E+ +AN LLRMYT + R + L+ + G E + A + Sbjct: 150 LELRPGAGGEEAGIFANELLRMYTMFCSNRSLRATLLKKECENAGANGGSEDRLIEAVME 209 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------DDSIEIEIS 224 I+ P +Y L+ E GVHR+ R+ ++ R HTS S+ + P D + + Sbjct: 210 IETPGSYETLRTEAGVHRVQRVPATENKGRTHTSAVSVVILPSFPSNIGEGDSELNFDDP 269 Query: 225 ESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 SD ID RA GAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW Sbjct: 270 NSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAW 329 Query: 278 NMLRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSY 315 ++LRA++ + + REE +G +K +G G +IR+Y Sbjct: 330 HLLRARIAQQRREAREEEMVKLRRGVMGGVAK--MGRGDKIRTY 371 >gi|221051906|ref|XP_002257529.1| peptidyl-trna hydrolase [Plasmodium knowlesi strain H] gi|193807359|emb|CAQ37864.1| peptidyl-trna hydrolase, putative [Plasmodium knowlesi strain H] Length = 334 Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 141/273 (51%), Gaps = 44/273 (16%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK----FKTEALEIHDGEEAGIKSATL 170 N L + +G GGTE+ D+ +ML MY ++ K K K E +++ E GIK + Sbjct: 63 NSCSLILSSGTGGTEACDFCSMLYNMYMKYLSKLKNKKNIKYEVMDLSKNE-VGIKKVEI 121 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV---DDSI-------- 219 I G ++ E+G+HR+VR SP+++ +++ TSF + V P + D ++ Sbjct: 122 KIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKKMTSFVKVDVIPTLSYNDTNVINFLNIAE 181 Query: 220 ------------------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 EI +++SD I T R+ G GGQ+VN ++AVRI H PT + V Sbjct: 182 SSSTPVKKTLNSRNINVNEIPLNKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISV 241 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVL 317 + ERSQ NK A + KL L+L+ K+ E +N K+ +G QIR+Y+L Sbjct: 242 KVSSERSQILNKRIALKTIYEKLLYLQLEALKNKKYEFSN-----KSLTHFGEQIRNYIL 296 Query: 318 QPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKA 349 +M+KD RTN+ T VL G+++ F+ A Sbjct: 297 YGNKMIKDTRTNVFSTDVDRVLSQGEIELFVDA 329 >gi|240279273|gb|EER42778.1| peptide chain release factor 1 [Ajellomyces capsulatus H143] Length = 438 Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 29/224 (12%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171 LE+ GAGG E+ +AN LLRMYT + R + L+ + G E + A + Sbjct: 150 LELRPGAGGEEAGIFANELLRMYTMFCSNRSLRATLLKKECENAGANGGSEDRLIEAVME 209 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-------DDSIEIEIS 224 I+ P +Y L+ E GVHR+ R+ ++ R HTS S+ + P D + + Sbjct: 210 IETPGSYETLRTEAGVHRVQRVPATENKGRTHTSAVSVVILPSFPSNIGEGDSELNFDDP 269 Query: 225 ESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 SD ID RA GAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW Sbjct: 270 NSDYYIDPQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAW 329 Query: 278 NMLRAKLYELELQKREE------IANIGESSKTEIGWGRQIRSY 315 ++LRA++ + + REE +G +K +G G +IR+Y Sbjct: 330 HLLRARIAQQRREAREEEMVKLRRGVMGGVAK--MGRGDKIRTY 371 >gi|307565625|ref|ZP_07628103.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A] gi|307345657|gb|EFN91016.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A] Length = 370 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 108/323 (33%), Positives = 163/323 (50%), Gaps = 35/323 (10%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEE-DDCSILQETSDNLQRIKLEVEY 101 +M R+ ++ IKE +D L + + + E+A EE D ILQ KLE E Sbjct: 50 IMEARKRYIACLTTIKEAKDILANENDPDMKEMAREELSDNEILQP--------KLEEEI 101 Query: 102 KQFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 K LL DS DA +EV AG GG E+ +A + MY R+ +K+ + +I+ Sbjct: 102 K----LLLVPKDSEDAKNVQMEVRAGTGGDEAALFAGDIFNMYKRFCDKKGWTLSVTDIN 157 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 +G G K I G YG LK E GVHR+ R+ D+ R TS +++ V P D Sbjct: 158 EGAVGGFKEIDFAISGEGVYGILKYESGVHRVQRVPSTDTQGRMQTSAATVAVLPEA-DK 216 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP-----TG----VVVQCQQERSQ 269 E+ I+E D + DT+R+SGAGGQ+VN +S VR+ + P TG ++++C + R Q Sbjct: 217 FEVNINEGDIKWDTFRSSGAGGQNVNKVESGVRLRY-PWKNPNTGEIEEILIECTETRDQ 275 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDL 326 KNK +A + LR +Y+ E QK I +I K+ + G +IR+Y P V D Sbjct: 276 PKNKERALSRLRTFIYDREHQKY--INDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDH 332 Query: 327 RTNIEKTSPSDVLDGDLDDFMKA 349 R ++G++ + + A Sbjct: 333 RIGFTSHDLPGFMNGNIQEMIDA 355 >gi|223997436|ref|XP_002288391.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975499|gb|EED93827.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 366 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/282 (30%), Positives = 146/282 (51%), Gaps = 26/282 (9%) Query: 22 RLSF--LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 R SF L + DP + + + +M++R + + D C LE A E Sbjct: 15 RRSFQALTERLADPDVIADSNLLRQVMKDRSQSEETVQAF----DEYCQLETELEGAQE- 69 Query: 80 DDCSILQETSDNLQRIKL--------EVEYKQFESLLS------GEADSNDAYLEVHAGA 125 + QE D+++ ++ EV + E+L+ D + LE+ AG Sbjct: 70 ----LFQEAGDDVEMREMARSEMKEIEVRLDELETLIKILLLPKDPNDDRNCMLEIRAGT 125 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG+E+ +A LL +Y ++ ++ ++ G++ G K+ L +KG + Y LK E Sbjct: 126 GGSEANIFAGDLLDVYRKFMSAEGWQVSMMDSSPGDDGGYKNVVLEVKGDSVYSKLKWEA 185 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS +++ + P D+ ++++I D + T R+ GAGGQ+VN Sbjct: 186 GVHRVQRVPATETQGRVHTSTATVAIMPECDE-VDVKIDPKDIEMSTMRSGGAGGQNVNK 244 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 ++AV + H PTG+ ++C QERSQ KNK A ML A+LY++ Sbjct: 245 VETAVDLLHKPTGIRIKCTQERSQLKNKELAMKMLMARLYDI 286 >gi|164660096|ref|XP_001731171.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966] gi|159105071|gb|EDP43957.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966] Length = 395 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 132/254 (51%), Gaps = 26/254 (10%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE-------------------- 153 S A +E+ G GG ES + +LRMY ++ E R K + Sbjct: 109 SKGAIMELRQGVGGQESCLFLGEMLRMYIKFCETRAQKAQDEDDPSMLGAGWSTDLLSAT 168 Query: 154 ALEIHDGEEAG--IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 +++ AG + A L I GPNA+ L+ E GVHR+ RI + + TS +I V Sbjct: 169 PVDVSATSGAGDAYREAILQIHGPNAFEALRFEAGVHRVQRIPATQNLGKLQTSTMAIIV 228 Query: 212 YPV-VDDSIEIEISES-DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 P+ ++ + +I +S D R++T RA GAGGQHVN T+SAVR+TH P+G+ V Q RSQ Sbjct: 229 LPMQAENDVSKDIVDSKDVRVETMRARGAGGQHVNRTESAVRLTHDPSGITVSMQDSRSQ 288 Query: 270 HKNKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 H+N+ +AW++LRA+L ++ LQK E + S ++R+Y P V D R Sbjct: 289 HQNRVKAWDVLRARLLDIHLQKEASENRALRRSQVASAERSERVRTYNF-PQDRVTDHRI 347 Query: 329 NIEKTSPSDVLDGD 342 I + +DGD Sbjct: 348 GISLSDIHRFMDGD 361 >gi|302346475|ref|YP_003814773.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC 25845] gi|302150829|gb|ADK97090.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC 25845] Length = 370 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/319 (31%), Positives = 163/319 (51%), Gaps = 27/319 (8%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEE-DDCSILQETSDNLQRIKLEVEY 101 +M R+ N ++ IKE +D + + + + E+A EE + LQ + + IKL + Sbjct: 50 IMDARRRYINCLTTIKEAKDIIANESDAEMKEMAREELSENEALQPALE--EEIKLLLVP 107 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 K E D+ + +E+ GAGG E+ +A L MY R+ +K+ +K + +G Sbjct: 108 KDPE-------DAKNVQMEIRGGAGGDEAALFAGDLFNMYKRYCDKKGWKLSITSVSEGT 160 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K ++G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 161 AGGFKEIDFAVEGDNVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEV 219 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNK 273 I+E D + DT+R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK Sbjct: 220 NINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNK 279 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +A + L +Y+ E QK + +I KT + G +IR+Y P V D R Sbjct: 280 ERALSRLYTYIYDHEHQKY--VDDIASRRKTLVSTGDRSAKIRTYNY-PQGRVTDHRIGF 336 Query: 331 EKTSPSDVLDGDLDDFMKA 349 ++G++ D + A Sbjct: 337 TTHDLQGFMNGEIQDMIDA 355 >gi|219129897|ref|XP_002185114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403293|gb|EEC43246.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 283 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 105/281 (37%), Positives = 148/281 (52%), Gaps = 38/281 (13%) Query: 81 DCSILQETSDNLQRIKLE---VEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWAN 135 D + +E + LQR+ E +E +++L + D +DA +E+ AG GG E+ +A+ Sbjct: 9 DKDMQRECENELQRVDRERAVLEGLIVDAVLPEDEDDYESDAIIEIRAGTGGDEASLFAS 68 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA------------------ 177 LL Y + A ++K E L + GI+ A++ I G NA Sbjct: 69 ELLEAYQKAAMAIRWKVEVLAESRTDIGGIREASISISG-NASFRLPATDSEREDSGPLL 127 Query: 178 --YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE---ISESDCRIDT 232 YG K E GVHR+ R+ DS R HTS SI V P V SI E + S+ RI+T Sbjct: 128 GPYGAFKFESGVHRVQRVPINDS--RIHTSACSIAVLPFVS-SISNEKELLPMSELRIET 184 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SGAGGQHVNTTDSAVRITH+PTG+ Q ERSQHKNKA+A ++ A++ + Q+ Sbjct: 185 MRSSGAGGQHVNTTDSAVRITHLPTGITAAIQDERSQHKNKAKALKLITARVR--DRQRT 242 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 + GE +G G +IR+Y P + D R + Sbjct: 243 DAQLARGELRSNLMGGGDRSERIRTYNY-PQDRITDHRCKV 282 >gi|119195451|ref|XP_001248329.1| peptide chain release factor 1, mitochondrial precursor (MRF-1) [Coccidioides immitis RS] Length = 438 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 136/256 (53%), Gaps = 25/256 (9%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDG-----EEAGIKSATLL 171 +E+ GAGG E+ +A+ LLRMY + + +T L ++ DG E + A + Sbjct: 149 VEIRPGAGGDEAGLFASELLRMYLAFCSRHGLRTAILKKDVEDGAGGSGSEDRLSEAVME 208 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-----------DDSIE 220 I+ P +Y L+ E GVHR+ RI ++ R HTS S+ + P D + + Sbjct: 209 IEAPGSYNILRTEAGVHRVQRIPATEAKGRVHTSAVSVMILPSFSEQNDSALNFDDPNSD 268 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+ D + + RASGAGGQHVN T+SA+R+TH+PT VV Q RSQH+N+ +AW +L Sbjct: 269 YYINPQDVQSEKMRASGAGGQHVNKTESAIRLTHVPTSTVVAVQDSRSQHENRRKAWRLL 328 Query: 281 RAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 R+K+ ++ + RE E+ +G G ++R+Y + D R+ + + Sbjct: 329 RSKIAQMRREAREQELVELRRGIMGGVARMGRGDKVRTYNFGQNRCT-DHRSGVTIHNLG 387 Query: 337 DVLDG--DLDDFMKAT 350 VLDG LD+ M++ Sbjct: 388 SVLDGGEGLDNIMESV 403 >gi|310796023|gb|EFQ31484.1| RF-1 domain-containing protein [Glomerella graminicola M1.001] Length = 397 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 23/189 (12%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSA 168 LE+ G GG E + +A+ L RMY ++ ++ ++ E ++ + AG ++ A Sbjct: 114 LEIRPGPGGLEGRFFADTLFRMYKQYCSRKGYRAEVIKYETADAAGDQSTAAGESPLQEA 173 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS---------- 218 + I P AY +GE G+HR+ RI + N R HTS ++WV P +S Sbjct: 174 IVEIHDPGAYDLFRGEAGMHRVQRIPATEKNGRVHTSAVAVWVLPSFQESGGEGGAQDMD 233 Query: 219 ---IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + I ++ +I+T RA GAGGQHVN T+SA+R+TH+PTG VV Q RSQ +N+ Sbjct: 234 NPESDFYIDPAEVKIETMRARGAGGQHVNKTESAIRMTHVPTGTVVSMQDSRSQSRNRED 293 Query: 276 AWNMLRAKL 284 AW ++R+++ Sbjct: 294 AWKLMRSRV 302 >gi|303310501|ref|XP_003065262.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240104924|gb|EER23117.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320034924|gb|EFW16867.1| peptide chain release factor 1 [Coccidioides posadasii str. Silveira] Length = 438 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 136/256 (53%), Gaps = 25/256 (9%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHDG-----EEAGIKSATLL 171 +E+ GAGG E+ +A+ LLRMY + + +T L ++ DG E + A + Sbjct: 149 VEIRPGAGGDEAGLFASELLRMYLAFCSRHGLRTAILKKDVEDGAGGSGSEDRLSEAVME 208 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-----------DDSIE 220 I+ P +Y L+ E GVHR+ RI ++ R HTS S+ + P D + + Sbjct: 209 IEAPGSYNILRTEAGVHRVQRIPATEAKGRVHTSAVSVMILPSFSEQNDSALNFDDPNSD 268 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+ D + + RASGAGGQHVN T+SA+R+TH+PT VV Q RSQH+N+ +AW +L Sbjct: 269 YYINPQDVQSEKMRASGAGGQHVNKTESAIRLTHVPTSTVVAVQDSRSQHENRRKAWRLL 328 Query: 281 RAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 R+K+ ++ + RE E+ +G G ++R+Y + D R+ + + Sbjct: 329 RSKIAQMRREAREQELVELRRGIMGGVARMGRGDKVRTYNFGQNRCT-DHRSGVTIHNLG 387 Query: 337 DVLDG--DLDDFMKAT 350 VLDG LD+ M++ Sbjct: 388 SVLDGGEGLDNIMESV 403 >gi|288802476|ref|ZP_06407915.1| peptide chain release factor 1 [Prevotella melaninogenica D18] gi|288335004|gb|EFC73440.1| peptide chain release factor 1 [Prevotella melaninogenica D18] Length = 370 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/319 (31%), Positives = 163/319 (51%), Gaps = 27/319 (8%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEE-DDCSILQETSDNLQRIKLEVEY 101 +M R+ N ++ IKE +D + + + + E+A EE + LQ + + IKL + Sbjct: 50 IMDARRRYINCLTTIKEAKDIITNENDAEMKEMAREELSENEALQPALE--EEIKLLLVP 107 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 K E D+ + +E+ GAGG E+ +A L MY R+ +K+ +K + +G Sbjct: 108 KDPE-------DAKNVQMEIRGGAGGDEAALFAGDLFNMYKRYCDKKDWKLSITSVSEGT 160 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K ++G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 161 AGGFKEIDFAVEGDNVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEV 219 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNK 273 I+E D + DT+R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK Sbjct: 220 NINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNK 279 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +A + L +Y+ E QK + +I KT + G +IR+Y P V D R Sbjct: 280 ERALSRLYTYIYDHEHQKY--VDDIASRRKTLVSTGDRSAKIRTYNY-PQGRVTDHRIGF 336 Query: 331 EKTSPSDVLDGDLDDFMKA 349 ++G++ D + A Sbjct: 337 TTHDLQGFMNGEIQDMIDA 355 >gi|150002702|ref|YP_001297446.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482] gi|254882204|ref|ZP_05254914.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA] gi|294776956|ref|ZP_06742417.1| peptide chain release factor 1 [Bacteroides vulgatus PC510] gi|319643236|ref|ZP_07997864.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A] gi|149931126|gb|ABR37824.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482] gi|254834997|gb|EET15306.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA] gi|294449204|gb|EFG17743.1| peptide chain release factor 1 [Bacteroides vulgatus PC510] gi|317385140|gb|EFV66091.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A] Length = 371 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 132/246 (53%), Gaps = 15/246 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LE+ G GG E+ +A L RMY+++ E + ++ E ++G G K + Sbjct: 113 DDRNAILEIRGGTGGDEAAIFAGDLFRMYSKYCETKGWRLEVSSANEGAAGGFKEIICSV 172 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +S+ V P + ++EI+E + + DT Sbjct: 173 TGDKVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEA-EPFDVEINEGEIKWDT 231 Query: 233 YRASGAGGQHVNTTDSAVRI--------THIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ T I ++++C + R Q KNK +A + LR + Sbjct: 232 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFI 291 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK I +I KT + G +IR+Y P + D R N + + +DG Sbjct: 292 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 348 Query: 342 DLDDFM 347 D+ D + Sbjct: 349 DIQDCI 354 >gi|46117472|ref|XP_384754.1| hypothetical protein FG04578.1 [Gibberella zeae PH-1] Length = 445 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 37/303 (12%) Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAY------LEVHAGAGGTES 130 DD S+ Q+ + + R +L E Q E+L LS + LE G GG E Sbjct: 114 DDASLDQDLA-AIARDELSSETGQLEALARKLSASLTPRHPFADFPCMLEFRPGPGGLEG 172 Query: 131 QDWANMLLRMYTRWAEKRKFKTEAL--EIHDGE--------EAGIKSATLLIKGPNAYGW 180 + + + L +MY +R ++ + E DG E ++ A L + A+ Sbjct: 173 RFFMDTLFKMYKGLCMRRGYRHTVVKYEFADGAGDSSSSAGENPLQEAILEVHDQGAFDI 232 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD----SIEIEISESD-------CR 229 +GE G+HR+ RI ++ R HTS ++WV P + SI+ E ESD + Sbjct: 233 FRGEAGMHRVQRIPSTETKGRVHTSAVAVWVLPSFPENSATSIDFEDPESDFYVNPQELK 292 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 I+T RA GAGGQHVN T+SA+R+TH+PTG V Q RSQ +N+ +AW ++R+++ + Sbjct: 293 IETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREEAWKLMRSRIADQRR 352 Query: 290 QKRE-EIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLD 344 ++RE E + + S SKT+I G +IR+Y D R I+ +VL+G LD Sbjct: 353 EQREQEASQLRNSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGIDVHGLPNVLEGGEKLD 411 Query: 345 DFM 347 M Sbjct: 412 KIM 414 >gi|225685111|gb|EEH23395.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb03] Length = 316 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 35/227 (15%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171 LE+ GAGG E+ +AN LLRMYT + R + L+ G E + A + Sbjct: 28 LELRPGAGGDEAGIFANELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVME 87 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--------------DD 217 I+ P +Y L+ E GVHR+ R+ +S R HTS S+ + P D Sbjct: 88 IETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAVSVVILPSFPRNGEEGDGELNFDDP 147 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 + + I + ++ RASGAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW Sbjct: 148 NSDFYIDPQEVNVEKMRASGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAW 207 Query: 278 NMLRAKLYELELQ---------KREEIANIGESSKTEIGWGRQIRSY 315 +LRA++ + + +R + +G ++G G +IR+Y Sbjct: 208 QLLRARIAQRRREAREEEMVKLRRGAMGGVG-----KMGRGDKIRTY 249 >gi|226493092|ref|NP_001141218.1| hypothetical protein LOC100273305 [Zea mays] gi|194703328|gb|ACF85748.1| unknown [Zea mays] Length = 407 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 122/221 (55%), Gaps = 24/221 (10%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSA 168 LE G GG E + + + L +MY +R ++ ++ + AG ++ A Sbjct: 125 LEFRPGPGGLEGRYFMDTLFKMYKALCMRRGYRHTVVKYEFADTAGDSSSSAGENPLQEA 184 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS----IEIEIS 224 L + P A+ + E G+HR+ RI ++ R HTS ++WV P ++ I+ + Sbjct: 185 ILEVHDPGAFDIFRSEAGMHRVQRIPSTETKGRVHTSAVAVWVLPSFPENGAANIDFDDP 244 Query: 225 ESD-------CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 ESD +I+T RA GAGGQHVN T+SA+R+TH+PTG V Q RSQ +N+ +AW Sbjct: 245 ESDFYVNPQEVKIETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREEAW 304 Query: 278 NMLRAKLYELELQKREEIA-NIGES--SKTEIGWGRQIRSY 315 +LR+++ + + REE A N+ S SKT+I G +IR+Y Sbjct: 305 KLLRSRIADQRREAREEEASNLRNSVLSKTQITRGDKIRTY 345 >gi|87300884|ref|ZP_01083726.1| peptide chain release factor 1 [Synechococcus sp. WH 5701] gi|87284755|gb|EAQ76707.1| peptide chain release factor 1 [Synechococcus sp. WH 5701] Length = 367 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 1/177 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S D LE+ AG GG E+ WA L RMY R+A+ + + L + + G K Sbjct: 106 LPSDPRDERSVMLEIRAGTGGDEAALWAGDLARMYERFAQTVGWSVQPLSASESDLGGFK 165 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 L I+G Y LK E GVHR+ R+ +S R HTS +++ V P D +E+++ + Sbjct: 166 ELILAIRGDGVYSQLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DPVEVQLDPA 224 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 D I T R+ GAGGQ+VN ++AV + H PTG+ V C QERSQ +N+ +A +LRAK Sbjct: 225 DLDISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAK 281 >gi|58260798|ref|XP_567809.1| hypothetical protein CNK01240 [Cryptococcus neoformans var. neoformans JEC21] gi|134117261|ref|XP_772857.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255475|gb|EAL18210.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229890|gb|AAW46292.1| hypothetical protein CNK01240 [Cryptococcus neoformans var. neoformans JEC21] Length = 480 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/247 (38%), Positives = 133/247 (53%), Gaps = 19/247 (7%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE----IHDGEEAGIKSATLLI 172 A + ++AG GG ES L RMY R+A R +K E + GI+ T+ Sbjct: 213 AVMSLNAGVGGLESALCTEDLARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELTVKF 272 Query: 173 KGPN-------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-IS 224 + P YG L+ E+GVHR+ R+ ++ R HTS ++ V P+ D+ E + Sbjct: 273 EPPQYAEEGIEVYGALQWEKGVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAPLVD 332 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D RID RA GAGGQHVN T+SAVR+THIPTG+ V Q RSQH+N+ AW +LRA+L Sbjct: 333 PKDVRIDVMRARGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQNRTWAWEILRARL 392 Query: 285 YELELQKREEIANIGESSKTEI-GWGR--QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 E + EE+ S + ++ G R +IR+Y ++ D R I T VLDG Sbjct: 393 S--EKKHNEEVEARRASRRDQVKGADRSDKIRTYNFNQDRLT-DHRFGITVTGLQHVLDG 449 Query: 342 D-LDDFM 347 + L+D + Sbjct: 450 EGLEDVI 456 >gi|255945217|ref|XP_002563376.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588111|emb|CAP86182.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255] Length = 423 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 90/247 (36%), Positives = 130/247 (52%), Gaps = 28/247 (11%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL----EIHDGEEAGIKSATLLIKG 174 LE+ GAGG E+ +A +LRMY + +R + L E+ E+ + A + I+ Sbjct: 147 LEIRPGAGGDEAGLFAFEMLRMYVAFCSRRGLRPTILKQDTEVGPSEDR-LSEAVIEIQA 205 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-------VDDSIEIEISESD 227 AY L+ E GVHR+ R+ ++ R HTS S+ V P +D+++ E SD Sbjct: 206 NGAYDILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPEDTSEMDNALNFEDPSSD 265 Query: 228 -------CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 R++ RA GAGGQHVN T+SA+R+THIPT VV Q ERSQ N+ +AW +L Sbjct: 266 YYIDPQEVRVEKMRAGGAGGQHVNKTESAIRLTHIPTNTVVSMQDERSQQANRRKAWQVL 325 Query: 281 RAKLYELELQKREE------IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 RAKL E + RE+ +G +K +G G +IR+Y + D RT I + Sbjct: 326 RAKLAEARQEAREQELMQLRRGILGGVAK--MGRGDKIRTYNFGQSRCT-DHRTGITIHN 382 Query: 335 PSDVLDG 341 +LDG Sbjct: 383 LDGILDG 389 >gi|294994856|ref|ZP_06800547.1| peptide chain release factor 1 [Mycobacterium tuberculosis 210] Length = 206 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 115/199 (57%), Gaps = 7/199 (3%) Query: 163 AGIKSATLLIKG----PNA-YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 G K ATL I P+ + +K E GVHR+ R+ +S R HTS + + VYP ++ Sbjct: 2 GGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEE 61 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++I ESD RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A Sbjct: 62 VGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRAL 121 Query: 278 NMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 +L A+L + ++ A+ +S+ + +IR+Y P + D R + + Sbjct: 122 QVLAARLQAMAEEQALADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKSHNLD 180 Query: 337 DVLDGDLDDFMKATLAIKK 355 VLDGDLD A A K Sbjct: 181 QVLDGDLDALFDALSAADK 199 >gi|224043444|ref|XP_002196330.1| PREDICTED: mitochondrial translational release factor 1 [Taeniopygia guttata] Length = 418 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 92/249 (36%), Positives = 134/249 (53%), Gaps = 13/249 (5%) Query: 102 KQFESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 K F+ L+ E D + LEV AG GG Q + + MY +A+ +++ + + Sbjct: 140 KLFQLLVPKEKYDRSSVILEVTAGRTTGGDICQQFTKEMFDMYQSYADYKRWTFDIVNYT 199 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVV 215 E G+ A I G N Y LK E G HR+ RI +SR HT S+ V P Sbjct: 200 PAEIGGLHHAAAHISGENVYRHLKYEGGTHRVQRIPETGMSSRMQRIHTGTMSVIVLPQP 259 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 ++ +++++ D RIDT+RA GAG QHVN TDSAVRI H+PTG+ V+CQQERSQ NK Sbjct: 260 EE-VDVKVDPKDLRIDTFRAKGAGEQHVNKTDSAVRIVHLPTGLAVECQQERSQQLNKEI 318 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEK 332 A LRAKLY+ ++K +++ + K ++G Q IR+Y V D R + + Sbjct: 319 ALRTLRAKLYQQLVEK--QLSQEQSARKLQLGTRAQSERIRTYNFT-QDRVTDHRISYDA 375 Query: 333 TSPSDVLDG 341 + ++L G Sbjct: 376 RNIKEILSG 384 >gi|210076204|ref|XP_504279.2| YALI0E22759p [Yarrowia lipolytica] gi|199426952|emb|CAG79876.2| YALI0E22759p [Yarrowia lipolytica] Length = 389 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/233 (35%), Positives = 130/233 (55%), Gaps = 11/233 (4%) Query: 80 DDCSILQETSDNLQRIKLEVE--YKQFESLLSGEADSND--AYLEVHAGAGGTESQDWAN 135 DD + ++ D + ++ E E K+ E+LL D +E+ G GG E+ + + Sbjct: 95 DDPELKKDAEDEIPTVEAEAEKAIKKLETLLLPTHPYGDIGCIIEMRPGIGGEEACLFTD 154 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LL MYT +A++ + + + ++ GI L + G +Y L+ E GVHR+ R+ Sbjct: 155 NLLNMYTGYADEMGWPYQITNVTRNDKGGITEVILSVDGEGSYNMLQHEGGVHRVQRVPV 214 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSI----EIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 +S+ R HTS +++ V P + +S +I+ + + RID RA GAGGQHVN T+SAVR Sbjct: 215 TESSGRVHTSAAAVIVLPQISESSVAADDIQFAPGEVRIDVMRAQGAGGQHVNKTESAVR 274 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 + HIPT +V Q RSQ +NK A+ +LR +L E QKR E A ++++T Sbjct: 275 LVHIPTKTMVVMQNSRSQRQNKEMAFMILRGRLAE---QKRREQAAKSKNART 324 >gi|258648524|ref|ZP_05735993.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259] gi|260851292|gb|EEX71161.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259] Length = 371 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 106/351 (30%), Positives = 171/351 (48%), Gaps = 33/351 (9%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-----NLI 71 D R ++T DP + + L +E + L++ + K + L + NL+ Sbjct: 13 DGLRSRFEEVSTLITDPSVIADQTRYVRLTKEYKELEDLMQARKRYAELLSNLQESKNLL 72 Query: 72 LLELALE------EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L E E E+ + E ++IKL + K E D +A LE+ AG Sbjct: 73 LTETDAELKELAREEVAACEAEIPTCEEQIKLMLVPKDPE-------DGKNAILEIRAGT 125 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY ++ E + +K E ++G G K + G + YG LK E Sbjct: 126 GGDEAALFAGDLFRMYAKFCESKGWKFEVSSANEGAVGGFKEVVASVTGADVYGTLKYES 185 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS +++ V P ++ ++EI E + R +T+R+SGAGGQ+VN Sbjct: 186 GVHRVQRVPATETQGRVHTSAATVAVLPEA-EAFDVEIHEGEIRWETFRSSGAGGQNVNK 244 Query: 246 TDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 +S VR+ + TG ++++C + R Q KNK +A LR +Y+ E QK + + Sbjct: 245 VESGVRLRYDWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--VDD 302 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 I KT + G +IR+Y P + D R N + +DGD+ D Sbjct: 303 IANRRKTLVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLPAFVDGDIQD 352 >gi|67526009|ref|XP_661066.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4] gi|40743816|gb|EAA63002.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4] Length = 367 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 25/225 (11%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 L SDNL+R V F L LE+ GAGG E+ +A LL+MY + Sbjct: 94 LTAISDNLKRAL--VPRHPFADL--------SCLLEIRPGAGGDEASIFAFELLQMYVAF 143 Query: 145 AEKRKFKTEALEIHDGEEAG--IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 + ++ +++ G+ + A L ++ AY L+ E GVHR+ R+ ++ R Sbjct: 144 CAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGVHRVQRVPTTEAKGRT 203 Query: 203 HTSFSSIWVYPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 HTS S+ V P D+ + I + R + RASGAGGQHVN T+SA Sbjct: 204 HTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMRASGAGGQHVNKTESA 263 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +R+TH+PTG+VV Q RSQH N+ +AW +LRAKL E + RE+ Sbjct: 264 IRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQ 308 >gi|213403996|ref|XP_002172770.1| peptide chain release factor 1 [Schizosaccharomyces japonicus yFS275] gi|212000817|gb|EEB06477.1| peptide chain release factor 1 [Schizosaccharomyces japonicus yFS275] Length = 312 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 90/234 (38%), Positives = 135/234 (57%), Gaps = 20/234 (8%) Query: 72 LLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL+LA E ++ I+++T D L+ + L ++ +++ A LEV AG GG+E Sbjct: 9 LLQLA-ESENNEIMKKTHDVLEGMHKLLSLKPNNYQA---------PALLEVRAGVGGSE 58 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVH 188 + +A+ LL MY R+ R +K + L + E GI A + + G + YG L E GVH Sbjct: 59 AALFASELLSMYERYCAFRNWKWKPLSLSKTENGNGITEAIVSVSG-HVYGELFHEAGVH 117 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---EIEISESDCRIDTYRASGAGGQHVNT 245 R+ R ++ R HTS S+ V P V+ E ++ +D R+D RA GAGGQHVN Sbjct: 118 RVQRTPATETKGRLHTSTVSVIVLPTVNSQTLETESKLDANDIRVDVMRAKGAGGQHVNR 177 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---LQKREEIA 296 T+SAVR+THIP+G+ V Q RSQH+NK +A +LR+++ L LQK++ A Sbjct: 178 TESAVRLTHIPSGITVCMQDSRSQHENKERALLILRSRVAALRHENLQKQQHDA 231 >gi|259485545|tpe|CBF82657.1| TPA: mitochondrial translation release factor (RF-1), putative (AFU_orthologue; AFUA_3G05410) [Aspergillus nidulans FGSC A4] Length = 418 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 25/225 (11%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 L SDNL+R V F L LE+ GAGG E+ +A LL+MY + Sbjct: 122 LTAISDNLKRAL--VPRHPFADL--------SCLLEIRPGAGGDEASIFAFELLQMYVAF 171 Query: 145 AEKRKFKTEALEIHDGEEAG--IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 + ++ +++ G+ + A L ++ AY L+ E GVHR+ R+ ++ R Sbjct: 172 CAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGVHRVQRVPTTEAKGRT 231 Query: 203 HTSFSSIWVYPVVDDS-------------IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 HTS S+ V P D+ + I + R + RASGAGGQHVN T+SA Sbjct: 232 HTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMRASGAGGQHVNKTESA 291 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +R+TH+PTG+VV Q RSQH N+ +AW +LRAKL E + RE+ Sbjct: 292 IRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQ 336 >gi|328463686|gb|EGF35274.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC 5462] Length = 198 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 7/190 (3%) Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ++I G N Y LK E G HR+ R+ +S R HTS +++ V P D+ ++++I Sbjct: 1 KEVVVMITGDNVYSKLKYENGAHRVQRVPVTESAGRVHTSTATVGVMPEYDE-VDLKIDP 59 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R D YR+SGAGGQHVN T SAVR+THIPTG+VV Q ERSQ +N+A+A +LR+++Y Sbjct: 60 KDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVY 119 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + + +E ++ K IG G +IR+Y P V D R + +++G+ Sbjct: 120 DYYETENQE--KYDQNRKNAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGE 176 Query: 343 LDDFMKATLA 352 LD+ + A + Sbjct: 177 LDEIIDALIV 186 >gi|255637443|gb|ACU19049.1| unknown [Glycine max] Length = 155 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 71/138 (51%), Positives = 96/138 (69%), Gaps = 4/138 (2%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D+S+ +EI E D I RA G GGQ+VN ++AVRITHIPTGV V+C +ERSQ NK + Sbjct: 6 DESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIR 65 Query: 276 AWNMLRAKLYEL-ELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A + L+AKL + E Q+ EI I G++ K E WG+QIR+YV PY++VKD+RT E T Sbjct: 66 ALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE--WGQQIRNYVFHPYKLVKDVRTGHETT 123 Query: 334 SPSDVLDGDLDDFMKATL 351 + V+DG+LD F+K+ L Sbjct: 124 DITSVMDGELDPFIKSYL 141 >gi|149237364|ref|XP_001524559.1| peptide chain release factor 1, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146452094|gb|EDK46350.1| peptide chain release factor 1, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 392 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 71/177 (40%), Positives = 103/177 (58%), Gaps = 7/177 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ G GG E+ + + L++MY +A + + + + L I P AY Sbjct: 134 IELRPGVGGNEASLFTDDLMQMYLNFASIQSWPALVISRSTNSSGFVNEIILSINQPGAY 193 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRID 231 L+ E GVHR+ RI ++ R HTS S++ + P + D + E++ + RID Sbjct: 194 DVLRHESGVHRVQRIPETENKGRVHTSTSAVIILPKMSDGNENSLRADEMQFKPGEVRID 253 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 T RA G GGQHVNTTDSAVR+ HIPTG++V Q ERSQ +NKA+A+ +LRA+L E E Sbjct: 254 TMRAGGKGGQHVNTTDSAVRLVHIPTGIMVMQQDERSQPQNKAKAFAILRARLAEKE 310 >gi|218263804|ref|ZP_03477780.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii DSM 18315] gi|218222477|gb|EEC95127.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii DSM 18315] Length = 369 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 15/242 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A +E+ G GG E+ +A L RMY ++ E + +K +G G K + Sbjct: 111 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +++ V P D+ ++EI+E + + DT Sbjct: 171 SGEKVYGTLKYESGVHRVQRVPATETQGRVHTSAATVAVLPEADE-FDVEINEGEIKWDT 229 Query: 233 YRASGAGGQHVNTTDSAVRITHI---P-TGV----VVQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ ++ P TGV +++C + R Q KNK +A LR+ + Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFI 289 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK + +I KT + G +IR+Y P + D R N + S +DG Sbjct: 290 YDKEHQKY--LDDIANKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDG 346 Query: 342 DL 343 D+ Sbjct: 347 DI 348 >gi|319901262|ref|YP_004160990.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides helcogenes P 36-108] gi|319416293|gb|ADV43404.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides helcogenes P 36-108] Length = 370 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 84/244 (34%), Positives = 133/244 (54%), Gaps = 15/244 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS +A LE+ G GG E+ +A L RMY+++ + + +K E ++G G K + Sbjct: 112 DSRNAILEIRGGTGGDEAAIFAGDLFRMYSKFCDIKGWKLEVSSANEGAAGGFKEIICSV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG +K E GVHR+ R+ ++ R HTS +S+ V P ++ ++ I+E + + DT Sbjct: 172 TGDGVYGTMKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEE-FDVVINEGEIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTGVV----VQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ + TGVV ++C + R Q KNK +A + LR + Sbjct: 231 FRSGGAGGQNVNKVESGVRLRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFI 290 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK I +I KT + G +IR+Y P + D R N + + +DG Sbjct: 291 YDKEHQKY--IDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDG 347 Query: 342 DLDD 345 D+ D Sbjct: 348 DIQD 351 >gi|154490829|ref|ZP_02030770.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC 43184] gi|154088577|gb|EDN87621.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC 43184] Length = 369 Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 15/242 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A +E+ G GG E+ +A L RMY ++ E + +K +G G K + Sbjct: 111 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +++ V P D+ ++EI+E + + DT Sbjct: 171 SGEKVYGTLKYESGVHRVQRVPATETQGRVHTSAATVAVLPEADE-FDVEINEGEIKWDT 229 Query: 233 YRASGAGGQHVNTTDSAVRITHI---P-TGV----VVQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR+ ++ P TGV +++C + R Q KNK +A LR+ + Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFI 289 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK + +I KT + G +IR+Y P + D R N + S +DG Sbjct: 290 YDKEHQKY--LDDIANKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDG 346 Query: 342 DL 343 D+ Sbjct: 347 DI 348 >gi|260592403|ref|ZP_05857861.1| peptide chain release factor 1 [Prevotella veroralis F0319] gi|260535639|gb|EEX18256.1| peptide chain release factor 1 [Prevotella veroralis F0319] Length = 370 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 97/319 (30%), Positives = 162/319 (50%), Gaps = 27/319 (8%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ ++ IKE +D + + + + E+A EE L E + R++ E+ Sbjct: 50 IMDARKRYITCLTTIKEAKDIIANESDAEMKEMAREE-----LAENEELQPRLEEEI--- 101 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + + D+ + +E+ GAGG E+ +A L MY R+ +K+ +K + +G Sbjct: 102 KILLVPKDPEDAKNVQMEIRGGAGGDEAALFAGDLFNMYKRYCDKKGWKLSITSVSEGAV 161 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K ++G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 162 GGFKEIDFAVEGENVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP-----TG----VVVQCQQERSQHKNK 273 I+E D + DT+R+SGAGGQ+VN +S VR+ + P TG ++++C + R Q KNK Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRY-PWKNPNTGEVEEILIECTETRDQPKNK 279 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +A + L +Y+ E QK I +I KT + G +IR+Y P V D R Sbjct: 280 ERALSRLYTYIYDHEHQKY--IDDIASRRKTLVSTGDRSAKIRTYNF-PQGRVTDHRIGF 336 Query: 331 EKTSPSDVLDGDLDDFMKA 349 ++G++ + + A Sbjct: 337 TTHDLQGFMNGEIQEMIDA 355 >gi|297304301|ref|XP_001086824.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like, partial [Macaca mulatta] Length = 346 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/199 (44%), Positives = 111/199 (55%), Gaps = 17/199 (8%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE E G++ A+ I G AY +K E GVHR+ R+ R HTS ++ + P Sbjct: 133 LEYFPSEIGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTQKQGRIHTSTMTVAILPQ 192 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + I + I+ D RIDT +ASGAGGQHVNTTDSAVRI H+PT VV +CQQERSQ KN+ Sbjct: 193 PTE-INLVINPKDLRIDTKQASGAGGQHVNTTDSAVRIVHLPTSVVSKCQQERSQLKNRE 251 Query: 275 QAWNMLRAKLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 A LRAKLY + L+ KR+ I SK G +IR+Y P V D R I Sbjct: 252 LAMTKLRAKLYSMHLEKETNKRQNARKIRIGSK---GRSEKIRTYNF-PQNRVTDHR--I 305 Query: 331 EKTSPSDVLDGDLDDFMKA 349 KT DL+ FM+ Sbjct: 306 SKTL------HDLETFMQG 318 >gi|332876543|ref|ZP_08444305.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685510|gb|EGJ58345.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 370 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 19/341 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V R + T DP++ + L +E + L + + KE D L E+ E Sbjct: 15 VSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDSLQTLQDAKEMLATE 74 Query: 80 DDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135 DD + + + + + + E ++ LL AD D +E+ G GG E+ +A Sbjct: 75 DDPEMKEMAREEMAATEKHIPEMEERIKLLLVPADPEDDKNVIMEIRGGTGGDEAALFAG 134 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMYT++ E + +K +G G K + G YG LK E GVHR+ R+ Sbjct: 135 DLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTLKYESGVHRVQRVPA 194 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS +++ V P + ++EI+E + + DT+R+SGAGGQ+VN +S VR ++ Sbjct: 195 TETQGRVHTSAATVAVLPEAQE-FDVEINEGEIKWDTFRSSGAGGQNVNKVESGVRARYL 253 Query: 256 ---P-TG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 P TG ++++C + R Q KNK +A LR +Y+ E QK I +I KT + Sbjct: 254 WKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIANRRKTMVS 311 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 G +IR+Y P + D R + +DG++ D Sbjct: 312 TGDRSAKIRTYNY-PQSRITDHRIGYNMQNLPSFMDGNIQD 351 >gi|320592214|gb|EFX04653.1| mitochondrial translation release factor [Grosmannia clavigera kw1407] Length = 437 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 23/189 (12%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL--EIHD--GE-----EAGIKSAT 169 LE G GG E + + + L MY + ++ ++ + E+ D GE E+ ++ A Sbjct: 145 LEFRPGPGGLEGRFFTDSLFHMYQSYCTRQGYRARVIKYEVSDSLGETGADGESALQEAV 204 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---------- 219 L ++ AY +GE G+HR+ RI + N R HTS +++WV P DS Sbjct: 205 LEVQEAGAYDVFRGEAGIHRVQRIPATEKNGRTHTSAAAVWVLPSFPDSSGEGDSANDYD 264 Query: 220 ----EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + + +D R++T RA GAGGQHVN T+SA+R+TH+P+G VV Q RSQH+N+ Sbjct: 265 DPESDFYVQPADVRVETMRARGAGGQHVNKTESAIRLTHVPSGTVVSMQDSRSQHQNRDS 324 Query: 276 AWNMLRAKL 284 AW +LRA++ Sbjct: 325 AWKILRARI 333 >gi|242814526|ref|XP_002486386.1| mitochondrial translation release factor (RF-1), putative [Talaromyces stipitatus ATCC 10500] gi|218714725|gb|EED14148.1| mitochondrial translation release factor (RF-1), putative [Talaromyces stipitatus ATCC 10500] Length = 427 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/249 (34%), Positives = 130/249 (52%), Gaps = 33/249 (13%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----IKSATLLIKG 174 LE+ GAGG E+ +A LLRMY + ++ +T ++ D EE+ + A + I+ Sbjct: 149 LEIRPGAGGDEAGLFAYELLRMYQSFCSRKGLRTSIVK-QDMEESTSNDRVTEAVVEIET 207 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV------DDSIEIEISESD- 227 P +Y L+ E GVHR+ R+ ++ R HTS S+ + P +D++ E SD Sbjct: 208 PGSYDILRTEIGVHRVQRVPATEAKGRTHTSAVSVMILPSFPESGANEDNLNFEDPNSDY 267 Query: 228 ------CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 R + RASGAGGQHVN T+SA+R+THIPTG+ V Q RSQH N+ +AW +LR Sbjct: 268 YVNPQEVRSEKMRASGAGGQHVNKTESAIRLTHIPTGLTVSMQDSRSQHANRKKAWQLLR 327 Query: 282 AKLYELELQ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 AKL E + +R + + ++G G ++R+Y + D R+ I Sbjct: 328 AKLAERRREAREEEMVKLRRGAMGGVA-----KMGRGDKVRTYNFSQSRCT-DHRSGITV 381 Query: 333 TSPSDVLDG 341 VLDG Sbjct: 382 HDLDSVLDG 390 >gi|168705097|ref|ZP_02737374.1| peptide chain release factor 1 [Gemmata obscuriglobus UQM 2246] Length = 358 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 103/337 (30%), Positives = 169/337 (50%), Gaps = 16/337 (4%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R + L + DP + + ++A + +ER L + E + RLC + E+ + D Sbjct: 11 RYAELEQQLYDPAIAGDPVKAGAIGKERGALAKIVEPYIEYK-RLCRAIADAEVMAADPD 69 Query: 82 CSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + + R K + + + E LL D + +E+ AG GG E+ +A L Sbjct: 70 LKDMADEELADLRPKRDALHARIEEKLLLDPSEDFSKLIIEIRAGTGGDEAALFAGNLYE 129 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MYTR+A ++ +K E + GE G K + G + Y L+ E G HR+ R+ ++ Sbjct: 130 MYTRYAREKGWKIEEIASSPGEAGGFKEVAFGVTGDDVYQLLRYESGGHRVQRVPATETQ 189 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISES-DCRIDTYRASGAGGQHVNTTDSAVRITH---I 255 R HTS +++ V P +++ ++EI+E+ D + RA GAGGQHVN T+SAVRI + Sbjct: 190 GRIHTSAATVAVLPEPEEA-QVEINEANDIEWERMRAGGAGGQHVNKTESAVRIWYKKGT 248 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWG---RQ 311 P + V+CQ RSQ KN QA +LR++L+E + ++ E A++ K +IG G + Sbjct: 249 PDEMEVKCQDGRSQGKNYEQAMRILRSRLFERQQERIHRERASM---RKEQIGSGDRNAR 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P D R ++ G LD ++ Sbjct: 306 IRTYNF-PQNRCTDHRIEFTVYKLDAIMAGALDQMIQ 341 >gi|330995510|ref|ZP_08319414.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT 11841] gi|329575422|gb|EGG56964.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT 11841] Length = 370 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 102/341 (29%), Positives = 165/341 (48%), Gaps = 19/341 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 V R + T DP++ + L +E + L + + KE D L E+ E Sbjct: 15 VSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDSLQTLQDAKEMLAIE 74 Query: 80 DDCSILQETSDNLQRIKLEV-EYKQFESLLSGEADSND---AYLEVHAGAGGTESQDWAN 135 DD + + + + + + E ++ LL AD D +E+ G GG E+ +A Sbjct: 75 DDPEMKEMAREEMAAAEKHIPEMEERIKLLLVPADPEDDKNVIMEIRGGTGGDEAALFAG 134 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMYT++ E + +K +G G K + G YG LK E GVHR+ R+ Sbjct: 135 DLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTLKYESGVHRVQRVPA 194 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS +++ V P + ++EI+E + + DT+R+SGAGGQ+VN +S VR ++ Sbjct: 195 TETQGRVHTSAATVAVLPEAQE-FDVEINEGEIKWDTFRSSGAGGQNVNKVESGVRARYL 253 Query: 256 ---P-TG----VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 P TG ++++C + R Q KNK +A LR +Y+ E QK I +I KT + Sbjct: 254 WKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIANRRKTMVS 311 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 G +IR+Y P + D R + +DG++ D Sbjct: 312 TGDRSAKIRTYNY-PQSRITDHRIGYNMQNLPSFMDGNIQD 351 >gi|300727227|ref|ZP_07060643.1| peptide chain release factor 1 [Prevotella bryantii B14] gi|299775465|gb|EFI72059.1| peptide chain release factor 1 [Prevotella bryantii B14] Length = 370 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 105/318 (33%), Positives = 162/318 (50%), Gaps = 25/318 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ ++ IKE +D L + + + E+A EE L E ++ LQ KLE E K Sbjct: 50 IMDARKRYIACLNSIKEAKDILANESDPDMKEMAREE-----LSE-NEALQP-KLEEEIK 102 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + D+ + +E+ AGAGG E+ +A L MY ++ +KR + +G Sbjct: 103 -IALVPKDPEDAKNVQMEIRAGAGGDEAALFAGDLFNMYKKYCDKRGWTLSITSTSEGAV 161 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K I G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 162 GGFKEIDCAISGDNVYGVLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---P-TG----VVVQCQQERSQHKNKA 274 I+E D + DT+R+SGAGGQ+VN +S VR+ + P TG ++++C + R Q KNK Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEIEEILIECTETRDQPKNKE 280 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A + L +Y+ E QK + +I K+ + G +IR+Y P V D R Sbjct: 281 RALSRLYTYIYDHEHQKY--LDDISSRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYT 337 Query: 332 KTSPSDVLDGDLDDFMKA 349 L+GD+ D + A Sbjct: 338 THDLQGFLNGDIQDMIDA 355 >gi|255641350|gb|ACU20952.1| unknown [Glycine max] Length = 230 Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 132/220 (60%), Gaps = 10/220 (4%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R++E+ +K + E+ G K+ + IKG Y LK E GVHR+ R+ ++ Sbjct: 1 MYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQ 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ + P D+ +E+ I D + T R+ GAGGQ+VN ++A+ + H PTG+ Sbjct: 61 GRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGI 119 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 + C +ER+Q KN+ +A+ +LRAKLYE+++ RE+ ++ K ++G G +IR+Y Sbjct: 120 RIFCTEERTQLKNRNRAFQLLRAKLYEIKV--REQQESLRNQRKLQVGTGARSEKIRTYN 177 Query: 317 LQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++ L+ N E TS LDGD++D +++ + +++ Sbjct: 178 YKDNRVTDHRLKINYELTS---FLDGDIEDAVQSCVTMEQ 214 >gi|56203457|emb|CAI18896.1| mitochondrial translational release factor 1-like [Homo sapiens] Length = 164 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 1/128 (0%) Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 + G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P + I + Sbjct: 38 QGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INL 96 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 I+ D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LR Sbjct: 97 VINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLR 156 Query: 282 AKLYELEL 289 AKLY + L Sbjct: 157 AKLYSMHL 164 >gi|303237122|ref|ZP_07323692.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN] gi|302482509|gb|EFL45534.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN] Length = 370 Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 82/249 (32%), Positives = 129/249 (51%), Gaps = 17/249 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AGAGG E+ +A + MY R+ +K+ + + +G G K + Sbjct: 112 DDKNVQMEIRAGAGGDEAALFAGDIFNMYKRYCDKKGWNLSITSVSEGTVGGFKEIDFAV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ D+ R TS +++ V P D E+ I+E D + DT Sbjct: 172 AGTGVYGILKYESGVHRVQRVPSTDTQGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITHIP-----TG----VVVQCQQERSQHKNKAQAWNMLRAK 283 +R+SGAGGQ+VN +S VR+ + P TG ++++C + R Q KNK +A + LR Sbjct: 231 FRSSGAGGQNVNKVESGVRLRY-PWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTF 289 Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 +Y+ E QK + +I K+ + G +IR+Y P V D R ++ Sbjct: 290 IYDREHQKY--VNDIASRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLPGFMN 346 Query: 341 GDLDDFMKA 349 GD+ D + A Sbjct: 347 GDIQDMIDA 355 >gi|282859526|ref|ZP_06268631.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010] gi|282587754|gb|EFB92954.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010] Length = 370 Score = 132 bits (332), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 103/316 (32%), Positives = 164/316 (51%), Gaps = 21/316 (6%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ +S IKE +D L + + + E+A EE L E ++ LQ KLE E K Sbjct: 50 IMDARKRYIACLSTIKEAKDILANESDPDMKEMAREE-----LSE-NETLQP-KLEEEIK 102 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 E D+ + +EV AG GG E+ +A + MY R+ +K+ + ++++G Sbjct: 103 ILLVPKDPE-DAKNVQMEVRAGTGGDEAALFAGDIFNMYKRFCDKKGWTLSVTDVNEGAV 161 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K + G YG LK E GVHR+ R+ D+ R TS +++ V P D E+ Sbjct: 162 GGFKEIDFAVSGDGVYGILKYESGVHRVQRVPSTDTQGRMQTSAATVAVLPEA-DRFEVN 220 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---P-TG----VVVQCQQERSQHKNKA 274 I+E D + DT+R+SGAGGQ+VN +S VR+ + P TG ++++C + R Q KNK Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKE 280 Query: 275 QAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 +A + LR +Y+ E QK ++IAN +S + +IR+Y P V D R Sbjct: 281 RALSRLRTFIYDREHQKYVDDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTH 339 Query: 334 SPSDVLDGDLDDFMKA 349 ++G++ + + A Sbjct: 340 DLPGFMNGNIQEMIDA 355 >gi|255721217|ref|XP_002545543.1| peptide chain release factor 1, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240136032|gb|EER35585.1| peptide chain release factor 1, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 390 Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 84/228 (36%), Positives = 123/228 (53%), Gaps = 15/228 (6%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY------LEVHAGAGG 127 EL DD + +E + L+ I EVE + S LS + Y +E+ G GG Sbjct: 99 ELVNITDDPDLRKEAQEELETIAPEVE--KLVSQLSVKLRPPVKYAEKGCMIELRPGVGG 156 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ + LL MY +A + +K++ + + A L I +Y ++ E GV Sbjct: 157 NEASLFTGDLLNMYMGFASEMNWKSKIISEGRNASGFLNEAILCIDTLGSYDIMRHESGV 216 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-------SDCRIDTYRASGAGG 240 HR+ RI ++ R HTS +++ V P + + E + E + RIDT RASG GG Sbjct: 217 HRVQRIPETETKGRVHTSTAAVVVLPKLSEGNESSLKEDERVFAPGEVRIDTMRASGKGG 276 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 QHVNTTDSAVR+ HIPTG++V Q ERSQ NKA+A+ +LR++L + E Sbjct: 277 QHVNTTDSAVRLVHIPTGMIVYQQDERSQPMNKAKAFAVLRSRLAQKE 324 >gi|212545056|ref|XP_002152682.1| mitochondrial translation release factor (RF-1), putative [Penicillium marneffei ATCC 18224] gi|210065651|gb|EEA19745.1| mitochondrial translation release factor (RF-1), putative [Penicillium marneffei ATCC 18224] Length = 421 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 87/249 (34%), Positives = 129/249 (51%), Gaps = 33/249 (13%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA----GIKSATLLIKG 174 LE+ GAGG E+ +A LLRMY + ++ +T ++ D EEA + A + I+ Sbjct: 148 LEIRPGAGGDEAGLFAYELLRMYQNFCSRKGLRTSIVK-QDMEEAISNDRLSEAVVEIET 206 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS------IEIEISESDC 228 P +Y L+ E GVHR+ R+ ++ R HTS S+ + P +S + E SD Sbjct: 207 PGSYDILRTEIGVHRVQRVPATEAKGRTHTSAVSVMILPNFPESGANEENLNFEDPNSDY 266 Query: 229 RIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 ++ RASGAGGQHVN T+SA+R+THIPTG+ V Q RSQH N+ +AW +LR Sbjct: 267 YVNPQEVKSEKMRASGAGGQHVNKTESAIRLTHIPTGLTVSMQDSRSQHANRKKAWQLLR 326 Query: 282 AKLYELELQ---------KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 AKL E + +R + + ++G G ++R+Y + D R+ I Sbjct: 327 AKLAERRREAREEEMVKLRRGAMGGVA-----KMGRGDKVRTYNFSQSRCT-DHRSGITV 380 Query: 333 TSPSDVLDG 341 VLDG Sbjct: 381 HDLDSVLDG 389 >gi|260911915|ref|ZP_05918480.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472 str. F0295] gi|260633938|gb|EEX52063.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472 str. F0295] Length = 370 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 157/317 (49%), Gaps = 23/317 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +M R+ ++ I E +D L + E E D + + +++ +R KLE E K Sbjct: 50 IMNARKRYVACLNSIAEAKDILAN-----ETDAEMKDMAREELSTNEAERPKLEEEIK-- 102 Query: 105 ESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 LL D DA +E+ AG GG E+ +A L MY R+ + + + +G Sbjct: 103 --LLLVPKDPEDAKNVQMEIRAGTGGDEAALFAGDLFGMYKRYCDSKGWNLSVTASSEGA 160 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K + G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 161 VGGFKEIDFAVSGDNVYGILKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEV 219 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---P-TG----VVVQCQQERSQHKNK 273 I+E D + DT+R+SGAGGQ+VN +S VR+ + P TG ++++C + R Q KNK Sbjct: 220 NINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGETEEILIECTETRDQPKNK 279 Query: 274 AQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 +A + LR +Y+ E QK ++IAN +S + +IR+Y P V D R Sbjct: 280 ERALSRLRTFIYDREHQKYVDDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTT 338 Query: 333 TSPSDVLDGDLDDFMKA 349 + GD+ + A Sbjct: 339 HDLQGFIGGDIQAMIDA 355 >gi|148243244|ref|YP_001228401.1| peptide chain release factor 1 [Synechococcus sp. RCC307] gi|166223614|sp|A5GVY9|RF1_SYNR3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|147851554|emb|CAK29048.1| Peptide chain release factor 1 [Synechococcus sp. RCC307] Length = 364 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 91/250 (36%), Positives = 134/250 (53%), Gaps = 16/250 (6%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L S D LE+ AGAGG E+ WA L RMY R A+ ++ + + E G K Sbjct: 106 LPSDPRDERSVMLEIRAGAGGDEACLWAGDLARMYERHAQTCGWQVNPVSASEAELGGFK 165 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 L I+G + LK E GVHR+ R+ +S R HTS +++ V P D ++++I Sbjct: 166 ELILAIRGDAVFSQLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEA-DPVDVQIDPK 224 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D I T R+ GAGGQ+VN ++AV + H PTG+ V C QERSQ +N+ +A +LRAKL Sbjct: 225 DLDISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLA 284 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN---IEKTSPSD-VL 339 E ++ + + + ++G G +IR+Y KD RT + K P + VL Sbjct: 285 KEEEEAAAAESS--ARRAQVGSGDRSEKIRTY------NYKDNRTTDHRLGKNFPLETVL 336 Query: 340 DGDLDDFMKA 349 +G L D ++A Sbjct: 337 NGQLSDLIEA 346 >gi|281420644|ref|ZP_06251643.1| peptide chain release factor 1 [Prevotella copri DSM 18205] gi|281405417|gb|EFB36097.1| peptide chain release factor 1 [Prevotella copri DSM 18205] Length = 369 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 161/318 (50%), Gaps = 25/318 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ N ++ IKE +D L + + + E+A EE L E ++ LQ KLE E K Sbjct: 49 IMDARKRYINCLNSIKEAKDILANESDPEMKEMAREE-----LNE-NEALQP-KLEEEIK 101 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + D+ + +E+ GAGG E+ +A L MY ++ E + + + +G Sbjct: 102 -IALVPKDPEDAKNVQMEIRGGAGGDEAALFAGDLFNMYKKYCESKGWTVSVTSVSEGAV 160 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K + G + YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 161 GGYKEIDFAVSGTDVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 219 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274 I+E D + DT+R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK Sbjct: 220 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKE 279 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A + L +++ E QK + +I K+ + G +IR+Y P V D R Sbjct: 280 RALSRLYTFIHDREHQKY--VDDIASRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYT 336 Query: 332 KTSPSDVLDGDLDDFMKA 349 + L GD+ D + A Sbjct: 337 THDLNGFLAGDIQDMIDA 354 >gi|171693921|ref|XP_001911885.1| hypothetical protein [Podospora anserina S mat+] gi|170946909|emb|CAP73713.1| unnamed protein product [Podospora anserina S mat+] Length = 431 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 23/190 (12%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI----------HDGEEAGIKSA 168 +EV G GGTE + +A+ + +MY + + F+T+ ++ DGE A ++ A Sbjct: 142 IEVVPGPGGTEGRFFADSVFKMYQAYCANKGFRTKVVQYLAADSTGEKGGDGETA-LQEA 200 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI-----EI 223 L + AY +GE G+HR+ R+ + + R HTS ++WV P ++ + Sbjct: 201 VLEVMEEGAYAHFRGEAGMHRVQRVPATEKSGRTHTSAVAVWVLPSFAENATASDGDWDN 260 Query: 224 SESDCRIDT-------YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 ESD ID RASGAGGQHVN T+SA+R+THIPTG+ V Q RSQH N+A A Sbjct: 261 PESDFYIDPAEVKSEKMRASGAGGQHVNKTESAIRLTHIPTGITVSMQDSRSQHTNRADA 320 Query: 277 WNMLRAKLYE 286 W +LR+++ + Sbjct: 321 WRLLRSRIAQ 330 >gi|322704975|gb|EFY96565.1| putative translation releasing factor RF-1 [Metarhizium anisopliae ARSEF 23] Length = 415 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 31/262 (11%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSA 168 +E G GG E + + + L +MY +R ++ L+ + AG ++ A Sbjct: 130 IEFRPGPGGLEGRYFTDSLFKMYKALCARRGYRANVLKYEMADAAGDQSSSAGENPVQEA 189 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV------------- 215 L I+ AY + E G+HR+ RI +S R HTS ++WV P Sbjct: 190 ILEIQDQGAYDLFRSEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPEGGSSGGGGEAD 249 Query: 216 --DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D + ++ + R++T RA GAGGQHVN T+SA+R+TH+PTG V Q RSQ +N+ Sbjct: 250 ADDPESDFYVNPQEVRVETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNR 309 Query: 274 AQAWNMLRAKLYELELQKR-EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 AW +LR+++ + R E A + S ++ +I G +IR+Y D R + Sbjct: 310 EDAWKLLRSRIAGQRAELRMHEAARLRNSVLAQAQITRGDKIRTYNYN-QDRCTDHRAGL 368 Query: 331 EKTSPSDVLDGD--LDDFMKAT 350 + + DVLDG LD M A Sbjct: 369 DVHNLPDVLDGGETLDRVMDAA 390 >gi|73667063|ref|YP_303079.1| class I peptide chain release factor domain-containing protein [Ehrlichia canis str. Jake] gi|72394204|gb|AAZ68481.1| Class I peptide chain release factor domain [Ehrlichia canis str. Jake] Length = 173 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/153 (47%), Positives = 105/153 (68%), Gaps = 9/153 (5%) Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 +K E GVHR+ R+ +++ R +TS +++ V P +++ ++++I E D RID YR+SG GG Sbjct: 1 MKFESGVHRVQRVPETEASGRLYTSAATVAVLPEIEE-VDLKIDEKDLRIDVYRSSGPGG 59 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVRITHIP+G+VV + E+SQHKNK A +LRA+LY LE QKR+ + I + Sbjct: 60 QSVNTTDSAVRITHIPSGIVVIQRDEKSQHKNK--ALKVLRARLYNLEKQKRD--SEISQ 115 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 K++IG G +IR+Y P + D R N+ Sbjct: 116 MRKSQIGSGDRSERIRTYNF-PQSRITDHRINL 147 >gi|325278153|ref|ZP_08143661.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51] gi|324096712|gb|EGB95050.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51] Length = 141 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/140 (45%), Positives = 94/140 (67%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + ++ + L D LL++A+EE+D + + L+ ++ + +F + SGE Sbjct: 2 LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTELEGLEENLAQLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ Sbjct: 62 MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLV 191 IKG A+GWL+ E GVHRLV Sbjct: 122 IKGEYAFGWLRTEIGVHRLV 141 >gi|322699423|gb|EFY91185.1| putative translation releasing factor RF-1 [Metarhizium acridum CQMa 102] Length = 800 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 83/259 (32%), Positives = 130/259 (50%), Gaps = 28/259 (10%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSA 168 +E G GG E + + + L +MY +R ++ L+ + AG ++ A Sbjct: 520 IEFRPGPGGLEGRYFTDSLFKMYKALCTRRGYRANVLKYEMADAAGDQSSSAGENPVQEA 579 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------- 219 L I+ AY + E G+HR+ RI +S R HTS ++WV P +S Sbjct: 580 ILEIQDQGAYDMFRSEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPESSSGGEADADD 639 Query: 220 ---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + ++ + +++T RA GAGGQHVN T+SA+R+TH+PTG V Q RSQ +N+ A Sbjct: 640 PESDFYVNPQEVKVETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREDA 699 Query: 277 WNMLRAKLYELELQKR-EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 W +LR+++ + R E A + S ++T+I G +IR+Y D R ++ Sbjct: 700 WKLLRSRIASQRAELRMHEAARLRNSVLAQTQITRGDKIRTYNYN-QDRCTDHRAGLDVH 758 Query: 334 SPSDVLDGD--LDDFMKAT 350 + DVLDG LD M A Sbjct: 759 NLPDVLDGGETLDRVMDAA 777 >gi|116335021|ref|YP_802516.1| peptide chain release factor B [Candidatus Carsonella ruddii PV] gi|116235302|dbj|BAF35150.1| peptide chain release factor B [Candidatus Carsonella ruddii PV] Length = 270 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 103/177 (58%), Gaps = 2/177 (1%) Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 L+ + ++ + ++E+ + GG ++ D L Y +W K KF E + + + G K Sbjct: 40 LNIKFNNLNCFVEIISNQGGIDTHDLNKFFLNFYYKWLLKNKFNVEIINL-EQSPYGYKK 98 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 + LLI ++ K E G+HR++R +P S+ + TS+ ++ + P + +++ I+++D Sbjct: 99 SLLLINNFFSFFLFKNESGLHRIIRKNPLISSKKIQTSYLNLNIVPKIINNVNF-INKND 157 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 I+ YR+ G+GGQHVNTT+SA+RI H PT +VV Q ERSQ NK A L KL Sbjct: 158 LIIENYRSKGSGGQHVNTTNSAIRIVHKPTNIVVTSQSERSQMLNKKFAMQTLEYKL 214 >gi|288928094|ref|ZP_06421941.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str. F0108] gi|288330928|gb|EFC69512.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str. F0108] Length = 370 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 159/319 (49%), Gaps = 27/319 (8%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ ++ I E +D L + + + E+A EE +++ +R KLE E K Sbjct: 50 IMNARKRYVACLNSIAEAKDILANESDAEMKEMAREE-------LSANETERPKLEEEIK 102 Query: 103 QFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 LL D DA +E+ AG GG E+ +A L MY R+ + + + + Sbjct: 103 ----LLLVPKDPEDAKNVQMEIRAGTGGDEAALFAGDLFGMYKRFCDSKGWNLSVTASSE 158 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G G K + G N YG LK E GVHR+ R+ ++ R HTS +++ V P D Sbjct: 159 GAVGGFKEIDFAVSGDNVYGVLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKF 217 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---P-TG----VVVQCQQERSQHK 271 E+ I+E D + DT+R+SGAGGQ+VN +S VR+ + P TG ++++C + R Q K Sbjct: 218 EVNINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGETEEILIECTETRDQPK 277 Query: 272 NKAQAWNMLRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NK +A + LR +Y+ E QK ++IAN +S + +IR+Y P V D R Sbjct: 278 NKERALSRLRTFIYDREHQKYVDDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGY 336 Query: 331 EKTSPSDVLDGDLDDFMKA 349 + GD+ + A Sbjct: 337 TTHDLQGFIAGDIQAMIDA 355 >gi|224086914|ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|222853978|gb|EEE91525.1| predicted protein [Populus trichocarpa] Length = 374 Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 27/264 (10%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + LL G D A + + AG+ G + W LL MY +WAEK +K +E H Sbjct: 123 EMSRLLKGPYDKQGACVVIRAGSKGLNHEIWKEELLNMYVKWAEKLGYKGRLVEKHTSMH 182 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV------- 215 GI+SAT+ + AYG+L GE+G+H +I+ + + + + + V P+ Sbjct: 183 GGIESATIEFEFECAYGYLSGERGIHH--KINSQNGSVHHEVTTACVDVVPLFLGTGFDF 240 Query: 216 ---DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 D+ + + S S R R T+ V + HIPTG+ VQ ERS N Sbjct: 241 QIDDEELIVSCSPSLLRDRKSR-----------TELTVCLQHIPTGISVQSSGERSHFAN 289 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEI--GWGRQIRSYVLQPYQMVKDLRTNI 330 K +A N L+AKL L + + +++ ++ + +I W ++ R YV QPY++V+D+RT I Sbjct: 290 KVKAHNRLKAKL--LVIAEEQKVCDVSSIRRADIVDEWQKETRRYVSQPYKLVQDVRTGI 347 Query: 331 EKTSPSDVLDGDLDDFMKATLAIK 354 E + +LDG+++ + A + I+ Sbjct: 348 ELPDLNSILDGNINTLIGAHINIR 371 >gi|238506130|ref|XP_002384267.1| mitochondrial translation release factor (RF-1), putative [Aspergillus flavus NRRL3357] gi|220690381|gb|EED46731.1| mitochondrial translation release factor (RF-1), putative [Aspergillus flavus NRRL3357] Length = 267 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 121/223 (54%), Gaps = 22/223 (9%) Query: 140 MYTRWAEKRKFKTEA--LEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 MYT + +R F++ LE+ DG E + A + ++ AY L+ E GVHR+ R+ Sbjct: 1 MYTAFCSRRGFRSNVIKLEVGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPAT 60 Query: 197 DSNSRRHTSFSSIWVYP-------VVDDSIEIEISESDCRIDT-------YRASGAGGQH 242 ++ R HTS S+ V P +D+++ + SD +D RA GAGGQH Sbjct: 61 ETKGRTHTSAVSVMVLPSFPETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQH 120 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANI 298 VN T+SA+R+TH+PTG+VV Q RSQH N+ +AW +LRA+L E + RE E+ Sbjct: 121 VNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRG 180 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +G G +IR+Y + D R++I + +DVLDG Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSR-CTDHRSSITIHNLNDVLDG 222 >gi|170595371|ref|XP_001902354.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi] gi|158590015|gb|EDP28797.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi] Length = 382 Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 88/278 (31%), Positives = 147/278 (52%), Gaps = 22/278 (7%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 HL+ + + D+L + L L+L L+E + +QE + ++ E ++ +S+++ Sbjct: 53 HLETVTTLAHKFYDKL-EMLTQLDLLLKEGNDPEIQE----IAKLDSEQLTEELDSVVNK 107 Query: 111 EADS----------NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 D N+ LE+ G GG E+ +A+ L +MY +A+ K+K ++ Sbjct: 108 LTDVVIPVTEYDLLNNCQLEITPGVGGVEASLFASELAQMYHNYAQFMKWKWTPYQMDVS 167 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 GI+SA + ++G A+ L+ E GVHR+ R P +R HTS S + V P D IE Sbjct: 168 PSGGIRSAVVFVRGNGAFRTLRYEAGVHRVQRF-PVTDKTRMHTSTSVVAVLPE-PDKIE 225 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++ +D +++T RASG GGQ+VN +AVR+TH TGV V C ER+Q+ N A+ L Sbjct: 226 ACVTPADVKVETMRASGPGGQNVNQRSTAVRLTHRETGVTVHCTDERTQYSNMEIAYKRL 285 Query: 281 RAKLYELELQKREEIANIGESSKTEIGW---GRQIRSY 315 A L + +L + ++ S K +IG ++R+Y Sbjct: 286 AAILLQRKLDETQK--QYSSSRKLQIGTKARAEKVRTY 321 >gi|282877960|ref|ZP_06286769.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310] gi|281299961|gb|EFA92321.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310] Length = 370 Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 11/246 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +E+ AG GG E+ +A L MY + + + + +++G G K + Sbjct: 112 DAKNVQMEIRAGTGGDEAALFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ I+E D + DT Sbjct: 172 SGDNVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DQFEVNINEGDIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK +A + LR + Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFI 290 Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 Y+ E QK ++IAN +S + +IR+Y P V D R ++GD+ Sbjct: 291 YDREHQKYIDDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFVNGDI 349 Query: 344 DDFMKA 349 + A Sbjct: 350 QAMIDA 355 >gi|194705206|gb|ACF86687.1| unknown [Zea mays] gi|195648693|gb|ACG43814.1| hypothetical protein [Zea mays] Length = 230 Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 129/220 (58%), Gaps = 10/220 (4%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ E+ +K + + + E G K+ + +KG Y LK E GVHR+ R+ ++ Sbjct: 1 MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ + P D+ +++ I D + T R+ GAGGQ+VN ++AV + H PTG+ Sbjct: 61 GRVHTSTATVAIMPEADE-VDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGI 119 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 + C +ERSQ +N+ +A+ +LRAKLYE++L RE+ ++ K ++G G +IR+Y Sbjct: 120 RIFCTEERSQLQNRERAFQLLRAKLYEIKL--REQQESLRNQRKLQVGTGARSEKIRTYN 177 Query: 317 LQPYQMVKD-LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++ L+ N E TS L GD++ +++ +++ Sbjct: 178 YKDNRVTDHRLKMNFELTS---FLLGDIESAIQSCATMEQ 214 >gi|288925782|ref|ZP_06419713.1| peptide chain release factor 1 [Prevotella buccae D17] gi|315608268|ref|ZP_07883258.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574] gi|288337437|gb|EFC75792.1| peptide chain release factor 1 [Prevotella buccae D17] gi|315250049|gb|EFU30048.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574] Length = 370 Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 160/318 (50%), Gaps = 25/318 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ ++ IKE +D L + + + E+A EE T+++LQ KLE E K Sbjct: 50 IMDVRKRYIACLNAIKESKDILANESDADMKEMAREE------LATNEDLQP-KLEEEIK 102 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + D+ + +E+ AGAGG E+ +A L MY ++ + + + + +G Sbjct: 103 -IALVPKDPEDAKNVQMEIRAGAGGDEAALFAGDLFNMYKKYCDSKGWNLSVTSVSEGAV 161 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K + G + YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 162 GGYKEIDFAVSGVDVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKA 274 I+E D + DT+R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKE 280 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A + L +++ E QK I +I K+ + G +IR+Y P V D R Sbjct: 281 RALSRLYTFIHDREHQKY--IDDIASRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYT 337 Query: 332 KTSPSDVLDGDLDDFMKA 349 + GD+ D + A Sbjct: 338 THDLQGFMGGDIQDMIDA 355 >gi|330951103|gb|EGH51363.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7] Length = 243 Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 120/204 (58%), Gaps = 16/204 (7%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L+R + L+ A + +K+ + + E+A+EE ++ET L ++LE + ++ Sbjct: 55 LLRVQGDLEGAQALLKD------SDPDMREMAVEE-----VRETKQQL--VELEAQLQRM 101 Query: 105 ESLLSGEA-DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LL + D + +LE+ AG GG E+ ++ L RMY+R+AE+R ++ E L ++GE Sbjct: 102 --LLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHG 159 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G K ++G + YG LK E G HR+ R+ +S R HTS ++ V P D+ IEI Sbjct: 160 GYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEI 219 Query: 224 SESDCRIDTYRASGAGGQHVNTTD 247 + +D R+DTYR+SGAGGQHVN TD Sbjct: 220 NPADLRVDTYRSSGAGGQHVNKTD 243 >gi|323345650|ref|ZP_08085873.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269] gi|323093764|gb|EFZ36342.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269] Length = 370 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/246 (32%), Positives = 127/246 (51%), Gaps = 11/246 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ +A L MY ++ + + + +G G K + Sbjct: 112 DEKNVQMEIRAGTGGDEAALFAGDLFNMYKKYCDSKGWTLSVTSESEGAVGGFKEIDFAV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ I+E D + DT Sbjct: 172 SGANVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVNINEGDIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK +A + LR + Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYPWRNPNTGETEEILIECTETRDQPKNKERALSRLRTFI 290 Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 Y+ E QK ++IAN +S + +IR+Y P V D R L G++ Sbjct: 291 YDREHQKYVDDIANRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFLGGNI 349 Query: 344 DDFMKA 349 + + A Sbjct: 350 QEMIDA 355 >gi|261880577|ref|ZP_06007004.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361] gi|270332696|gb|EFA43482.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361] Length = 369 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 27/317 (8%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQR-IKLEVEY 101 +M R+ + ++ IKE +D + + + + E+A EE SI + L+ IK+ + Sbjct: 49 IMDARKRYIDCLNAIKESKDIMTNESDADMKEMAREE--LSINESLQPQLEEEIKMALVP 106 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 K E D+ + +E+ AGAGG E+ +A L MY ++ + + + + +G Sbjct: 107 KDPE-------DAKNVQMEIRAGAGGDEAALFAGDLFNMYKKFCDTKGWSVSVTSVSEGS 159 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K + G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 160 VGGYKEIDFAVSGDNVYGVLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEV 218 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNK 273 I+E D + DT+R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK Sbjct: 219 NINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNK 278 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +A + L +Y+ E K + +I K+ + G +IR+Y P + D R Sbjct: 279 ERALSRLYTYIYDHERSKY--LNDISSRRKSLVSTGDRSAKIRTYNF-PQGRITDHRIGY 335 Query: 331 EKTSPSDVLDGDLDDFM 347 L GD+ D + Sbjct: 336 TTHDLQGFLGGDIQDMI 352 >gi|304382675|ref|ZP_07365169.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973] gi|304336300|gb|EFM02542.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973] Length = 370 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 27/319 (8%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ N I+ I+E +D L + + L E+A EE LQ +++ LQ +LE E K Sbjct: 50 IMDARRRYINCINAIQEAKDILNNETDADLKEMAREE-----LQ-SNETLQP-QLEEEIK 102 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + D+ + +E+ AG GG E+ +A L MY ++ + + + + +G Sbjct: 103 -IALVPKDPEDAKNVQMEIRAGTGGDEAALFAGDLFNMYKKFCDSKGWTLSITSVSEGAV 161 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K + G + YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 162 GGFKEIDFAVSGTDVYGILKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 220 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP-----TG----VVVQCQQERSQHKNK 273 I+E D + DT+R+SGAGGQ+VN +S VR+ + P TG ++++C + R Q KNK Sbjct: 221 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRY-PWKNPNTGETEEILIECTETRDQPKNK 279 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +A + LR +Y+ E QK + +I K+ + G +IR+Y Q + V D R Sbjct: 280 ERALSRLRTFIYDREHQKY--VDDIASRRKSLVSTGDRSAKIRTYNYQQGR-VTDHRIGF 336 Query: 331 EKTSPSDVLDGDLDDFMKA 349 L G++ + + A Sbjct: 337 TTHDLQGFLAGNIQEMIDA 355 >gi|282879521|ref|ZP_06288252.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1] gi|281306469|gb|EFA98498.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1] Length = 370 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/246 (32%), Positives = 128/246 (52%), Gaps = 11/246 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +E+ AG GG E+ +A L MY + + + + +++G G K + Sbjct: 112 DAKNVQMEIRAGTGGDEAALFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAV 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ I+E D + DT Sbjct: 172 SGDNVYGTLKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DQFEVNINEGDIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK +A + LR + Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFI 290 Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 Y+ E QK ++IAN +S + +IR+Y P V D R + GD+ Sbjct: 291 YDREHQKYIDDIANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIGGDI 349 Query: 344 DDFMKA 349 + A Sbjct: 350 QGVIDA 355 >gi|262383596|ref|ZP_06076732.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B] gi|262294494|gb|EEY82426.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B] Length = 369 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 130/246 (52%), Gaps = 15/246 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A +E+ G GG E+ +A L RMY ++ E + +K +G G K + Sbjct: 111 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +++ V P D+ ++EI+E + + DT Sbjct: 171 SGEKVYGTLKYESGVHRVQRVPATETQGRVHTSAATVAVLPEADE-FDVEINEGEIKWDT 229 Query: 233 YRASGAGGQHVNTTDSAVR--------ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR IT + ++++C + R Q KNK +A LR+ + Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFI 289 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK + +I KT + G +IR+Y P + D R N + S +DG Sbjct: 290 YDKEHQKY--LDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDG 346 Query: 342 DLDDFM 347 ++ D + Sbjct: 347 EIQDCL 352 >gi|317502848|ref|ZP_07960949.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606] gi|315666037|gb|EFV05603.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606] Length = 370 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 103/321 (32%), Positives = 165/321 (51%), Gaps = 31/321 (9%) Query: 45 LMRERQHLDNAISFIKEIQDRLC--DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ + + IKE ++ L D+ + E+A EE LQE +++LQ KLE E K Sbjct: 50 IMNARKRYISCLDSIKEAKNILANEDDADMKEMAREE-----LQE-NESLQP-KLEEEIK 102 Query: 103 QFESLLSGEADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 LL D DA +E+ AG GG E+ +A L MY ++ + + + ++ + Sbjct: 103 ----LLLVPKDPEDAKNVQMEIRAGTGGDEAALFAGDLFNMYKKYCDMKGWILSITDVSE 158 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G G K I G + YG +K E GVHR+ R+ +SN R TS +++ V P D Sbjct: 159 GAVGGYKEIDFAISGTDVYGIMKYESGVHRVQRVPVTESNGRMQTSAATVAVLPEA-DKF 217 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHK 271 E+ I+E D + DT+R+SGAGGQ+VN +S VR+ + TG ++++C + R Q K Sbjct: 218 EVNINEGDIKWDTFRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPK 277 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328 NK +A + L +++ E QK + +I + K+ + G +IR+Y P V D R Sbjct: 278 NKERALSRLYTFIHDREHQKY--VDDIADRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRI 334 Query: 329 NIEKTSPSDVLDGDLDDFMKA 349 L+G++ D + A Sbjct: 335 GYTTHDLQGFLNGNIQDMIDA 355 >gi|150008712|ref|YP_001303455.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC 8503] gi|255014510|ref|ZP_05286636.1| peptide chain release factor 1 [Bacteroides sp. 2_1_7] gi|256841252|ref|ZP_05546759.1| peptide chain release factor 1 [Parabacteroides sp. D13] gi|298375991|ref|ZP_06985947.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19] gi|301311522|ref|ZP_07217449.1| peptide chain release factor 1 [Bacteroides sp. 20_3] gi|166223582|sp|A6LDR9|RF1_PARD8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|149937136|gb|ABR43833.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC 8503] gi|256737095|gb|EEU50422.1| peptide chain release factor 1 [Parabacteroides sp. D13] gi|298267028|gb|EFI08685.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19] gi|300830608|gb|EFK61251.1| peptide chain release factor 1 [Bacteroides sp. 20_3] Length = 369 Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 130/246 (52%), Gaps = 15/246 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A +E+ G GG E+ +A L RMY ++ E + +K +G G K + Sbjct: 111 DDKNAIVEIRGGTGGDEAALFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTV 170 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E GVHR+ R+ ++ R HTS +++ V P D+ ++EI+E + + DT Sbjct: 171 SGEKVYGTLKYESGVHRVQRVPATETQGRVHTSAATVAVLPEADE-FDVEINEGEIKWDT 229 Query: 233 YRASGAGGQHVNTTDSAVR--------ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+ GAGGQ+VN +S VR IT + ++++C + R Q KNK +A LR+ + Sbjct: 230 FRSGGAGGQNVNKVESGVRLRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFI 289 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y+ E QK + +I KT + G +IR+Y P + D R N + S +DG Sbjct: 290 YDKEHQKY--LDDIASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDG 346 Query: 342 DLDDFM 347 ++ D + Sbjct: 347 EIQDCL 352 >gi|207109382|ref|ZP_03243544.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_CA4C1] Length = 196 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 114/200 (57%), Gaps = 12/200 (6%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDA 117 IKE ++ L D L ELA EE IL+ +Q+ LE KQ L+ + D + Sbjct: 7 IKENKELLEDKE-LSELAKEE--LKILE-----IQKSDLETAIKQL--LIPKDPNDDKNI 56 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 57 YLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGV 116 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E G HR+ R+ +S R HTS ++ + P VDD +E+ I+ SD +I+ +RA G Sbjct: 117 YSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGG 175 Query: 238 AGGQHVNTTDSAVRITHIPT 257 GGQ VNTTDSAVRITH+PT Sbjct: 176 HGGQCVNTTDSAVRITHLPT 195 >gi|241954572|ref|XP_002420007.1| peptide chain release factor, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223643348|emb|CAX42223.1| peptide chain release factor, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 392 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/240 (35%), Positives = 125/240 (52%), Gaps = 24/240 (10%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----------GEADSNDAYLEVH 122 +EL DD + +E + L+ I + Q E L+S AD +E+ Sbjct: 99 IELTEITDDPGLYKEAQEELKSIVI----PQIEKLVSELTVKLRPPVKYADKG-CIIELR 153 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+ + LL MY +A + +K + + I A L I +Y ++ Sbjct: 154 PGVGGNEASLFTGDLLNMYINFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMR 213 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI-------SESDCRIDTYRA 235 E GVHR+ RI ++ R HTS S++ V P + + E + + + RIDT RA Sbjct: 214 HESGVHRVQRIPETETKGRVHTSTSAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRA 273 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQHVNTTDSAVR+ HIPTG++V Q ERSQ NKA+A+ +LR++L + E + EEI Sbjct: 274 GGKGGQHVNTTDSAVRLVHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKE--QEEEI 331 >gi|302901381|ref|XP_003048424.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI 77-13-4] gi|256729357|gb|EEU42711.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI 77-13-4] Length = 412 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 34/284 (11%) Query: 91 NLQRIKLEVEYKQFESL---LSGEADSNDAY------LEVHAGAGGTESQDWANMLLRMY 141 ++ R +LE E + ESL LS + +E G GG E + + + L +MY Sbjct: 92 SIARDELESETGKLESLARNLSASLTPRHPFADFPCMIEFRPGPGGLEGRYFTDTLFKMY 151 Query: 142 TRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLKGEQGVHRLV 191 ++ ++ ++ + AG ++ A L I+ A+ + E G+HR+ Sbjct: 152 KALCMRKGYRHSVMKYEFADTAGDSSSSAGENPLQEAVLEIQDQGAFDLFRSEAGMHRVQ 211 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDS----IEIEISESD-------CRIDTYRASGAGG 240 RI +S R HTS ++WV P +S ++ E ESD +I+ RA GAGG Sbjct: 212 RIPSTESKGRVHTSAVAVWVLPSFPESGAGSVDFEDPESDFYVNPQDVKIEAMRARGAGG 271 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SA+R+TH+PTG V Q RSQ +N+ +AW M+RA++ + + REE A Sbjct: 272 QHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNRDEAWKMMRARIADQRREAREEEAARLR 331 Query: 301 S---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 + SKT+I G +IR+Y D R I+ +VL+G Sbjct: 332 NSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGIDVHDLPNVLEG 374 >gi|60279679|ref|NP_001012512.1| peptide chain release factor 1, mitochondrial [Danio rerio] gi|58701973|gb|AAH90173.1| Zgc:113104 [Danio rerio] Length = 235 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 111/188 (59%), Gaps = 15/188 (7%) Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 + MY +A + + E E G+ A++ + G + WLK E G HR+ RI Sbjct: 1 MFDMYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEV 60 Query: 197 DSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +SR HT ++ V P +++ ++I+I+ D RIDT+R+ GAGGQHVNTTDSAVR+ Sbjct: 61 GLSSRMQRIHTGTMTVIVLPQMEE-VDIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRLV 119 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIAN-----IGESSKTEIG 307 H+PTG V +CQQ RSQ KN+ A +LRA+L++ + Q+RE+ +G +++E Sbjct: 120 HLPTGTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQREQTHTARRLQVGTRAQSE-- 177 Query: 308 WGRQIRSY 315 +IR+Y Sbjct: 178 ---RIRTY 182 >gi|296775660|gb|ADH42937.1| protein chain release factor A [uncultured SAR11 cluster alpha proteobacterium H17925_23J24] Length = 181 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/155 (45%), Positives = 100/155 (64%), Gaps = 7/155 (4%) Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS +++ + P +D ++I+I++SD RID +R+SG GGQ VNTTDSAVRITH P+G+VV Sbjct: 21 HTSAATVAILPEAED-VDIKINDSDLRIDVFRSSGPGGQSVNTTDSAVRITHGPSGIVVT 79 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 Q E+SQHKNKA+A +LRA+LYE E K+E K++IG G +IR+Y P Sbjct: 80 QQDEKSQHKNKAKALKILRARLYESEKLKKER--QRSSERKSQIGTGDRSERIRTYNF-P 136 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 V D R N +D L+G++ + M L +K Sbjct: 137 QGRVTDHRINFTLHKLTDFLNGEIHEEMNENLRLK 171 >gi|121704606|ref|XP_001270566.1| mitochondrial peptide chain release factor [Aspergillus clavatus NRRL 1] gi|119398712|gb|EAW09140.1| mitochondrial peptide chain release factor [Aspergillus clavatus NRRL 1] Length = 251 Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 24/231 (10%) Query: 140 MYTRWAEKRKFKTEA--LEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 MYT + +R F + L++ DG E + A + I AY L+ E GVHR+ R+ Sbjct: 1 MYTAFCSRRGFPSHVIKLDVQDGPSEDRLSEAVIEIDAGGAYDLLRTESGVHRVQRVPAT 60 Query: 197 DSNSRRHTSFSSIWVYPVVDDSI--------------EIEISESDCRIDTYRASGAGGQH 242 ++ R HTS S+ V P D+ + I + R + RASGAGGQH Sbjct: 61 ETKGRTHTSAVSVMVLPSFPDTATGAEGALNFDDPNSDYYIDPQEVRTEKMRASGAGGQH 120 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANI 298 VN T+SA+R+THIPTG VV Q RSQH N+ +AW +LRAKL E + RE E+ Sbjct: 121 VNKTESAIRLTHIPTGTVVSMQDSRSQHANRKKAWQVLRAKLAEARQESREQELVELRRG 180 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFM 347 +G G +IR+Y + D R+ I + D+L G LD M Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSRCT-DHRSGITVHNLDDILGGGQGLDTVM 230 >gi|301347896|ref|ZP_07228637.1| peptide chain release factor 1 [Acinetobacter baumannii AB056] gi|301513180|ref|ZP_07238417.1| peptide chain release factor 1 [Acinetobacter baumannii AB058] gi|301597157|ref|ZP_07242165.1| peptide chain release factor 1 [Acinetobacter baumannii AB059] Length = 239 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 83/132 (62%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DSN AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L ++GE G K + Sbjct: 107 DSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G YG LK E G HR+ R+ +S R HTS ++ + P +D +EI+ +D RIDT Sbjct: 167 DGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDT 226 Query: 233 YRASGAGGQHVN 244 YRASGAGGQH+N Sbjct: 227 YRASGAGGQHIN 238 >gi|288800098|ref|ZP_06405557.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str. F0039] gi|288333346|gb|EFC71825.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str. F0039] Length = 369 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 95/321 (29%), Positives = 158/321 (49%), Gaps = 27/321 (8%) Query: 45 LMRERQHLDNAISFIKEIQDRLCD--NLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 +M R+ ++ IKE +D L + + + E+A EE LQ L +++ E+ Sbjct: 49 IMEARKKYVTCLNVIKEAKDILANETDQDMREIAREE-----LQANEPLLPKLEEEI--- 100 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + + D+ + +E+ AG GG E+ +A L +MY ++ + + +G Sbjct: 101 KIALVPKDPEDAKNVEVEIRAGTGGDEAALFAGDLFQMYKKYCDSMGWSISITNESEGTM 160 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G K + G N YG LK E GVHR+ R+ ++ R HTS +++ V P D E+ Sbjct: 161 GGFKEIAFSVTGTNVYGILKYESGVHRVQRVPATETQGRMHTSAATVAVLPEA-DKFEVN 219 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP-----TG----VVVQCQQERSQHKNK 273 I+E D + DT+R+SGAGGQ+VN +S VR+ + P TG ++++C + R Q KNK Sbjct: 220 INEGDIKWDTFRSSGAGGQNVNKVESGVRLRY-PWKNPNTGEVEEILIECTETRDQPKNK 278 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNI 330 +A + LR +Y+ E QK + +I K+ + G +IR+Y P V D R Sbjct: 279 ERALSRLRTFIYDREHQKY--VDDIASRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGY 335 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 + GD+ + A + Sbjct: 336 TTHDLQGFVGGDIQAMIDALI 356 >gi|312082910|ref|XP_003143641.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa] gi|307761198|gb|EFO20432.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa] Length = 384 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 150/283 (53%), Gaps = 16/283 (5%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS- 109 HL+ + + D+L L L++ L+E + + +Q+ + L +L VE + L+ Sbjct: 53 HLETVTTLARRFYDKL-GMLTELDMLLKEGNDAEIQKIA-KLDSEQLTVELDSIVNELTD 110 Query: 110 -----GEADS-NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 E DS N+ LE+ G GG E+ +A+ L MY +A+ K+K ++ Sbjct: 111 VVIPVTEYDSLNNCQLEIIPGVGGVEASLFASELAEMYHNYAQFMKWKWTPYQVDASPSG 170 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 GI+SA + ++G A+ L+ E GVHR+ R P +R HTS S + V P + IE + Sbjct: 171 GIRSAVVFVRGNGAFRALRYEAGVHRVQRF-PVTDKTRMHTSTSVVAVLPE-PEKIEACV 228 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 + +D +++T RASG GGQ+VN +AVR+TH TG+ V C ER+Q+ N A+ L A Sbjct: 229 TPADVKVETMRASGPGGQNVNQRSTAVRLTHRETGIAVHCVDERTQYSNMEIAYKRLAAI 288 Query: 284 LYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMV 323 L + +L + ++ S K ++G ++R+Y + Q++ Sbjct: 289 LLQRKLDETQK--QYSSSRKLQVGTKARAEKVRTYNFKDDQVI 329 >gi|332825293|ref|XP_003311599.1| PREDICTED: mitochondrial translational release factor 1-like [Pan troglodytes] Length = 281 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/150 (45%), Positives = 91/150 (60%), Gaps = 1/150 (0%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RIDT RASGAGGQHVNTTDSAVRI H+PTG Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPTG 269 >gi|294673455|ref|YP_003574071.1| peptide chain release factor 1 [Prevotella ruminicola 23] gi|294472502|gb|ADE81891.1| peptide chain release factor 1 [Prevotella ruminicola 23] Length = 371 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 129/246 (52%), Gaps = 11/246 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +E+ AG GG E+ +A L +MY + E + ++ + +G G K + Sbjct: 113 DAKNVEMEIRAGTGGDEAALFAGDLFKMYKNYCESKGWQVSITYVSEGAVGGFKEVDFSV 172 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG LK E GVHR+ R+ +SN R TS +++ V P D E+ ++E + + DT Sbjct: 173 TGADVYGTLKYESGVHRVQRVPVTESNGRMQTSAATVAVLPEA-DKFEVHVNEGEIKWDT 231 Query: 233 YRASGAGGQHVNTTDSAVRITHI----PTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+SGAGGQ+VN +S VR+ ++ TG ++++C + R Q KNK +A + L + Sbjct: 232 FRSSGAGGQNVNKVESGVRLRYMWKNPNTGETEEILIECTETRDQPKNKERALSRLYTFI 291 Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 Y+ E QK ++IAN +S + +IR+Y P V D R L GD+ Sbjct: 292 YDKEHQKYVDDIANRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGDI 350 Query: 344 DDFMKA 349 + A Sbjct: 351 QAMIDA 356 >gi|119493428|ref|XP_001263904.1| mitochondrial peptide chain release factor [Neosartorya fischeri NRRL 181] gi|119412064|gb|EAW22007.1| mitochondrial peptide chain release factor [Neosartorya fischeri NRRL 181] Length = 256 Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 118/223 (52%), Gaps = 22/223 (9%) Query: 140 MYTRWAEKRKFKTEA--LEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 MYT + +R ++ L++ DG + + A + I AY L+ E GVHR+ R+ Sbjct: 1 MYTAFCTRRGLRSNVIKLDVQDGPSDDRLSEAVVEIDADGAYDLLRTESGVHRVQRVPAT 60 Query: 197 DSNSRRHTSFSSIWVYPV-------VDDSIEIEISESD-------CRIDTYRASGAGGQH 242 ++ R HTS S+ V P +D ++ + +SD R + RASGAGGQH Sbjct: 61 ETKGRTHTSAVSVMVLPSFPEAGASMDSALNFDDPDSDYYVDPQEVRTEKMRASGAGGQH 120 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANI 298 VN T+SA+R+THIPTG+VV Q RSQH N+ +AW +LRAKL E + RE E+ Sbjct: 121 VNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQVLRAKLAEARQEAREQELVELRRG 180 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +G G +IR+Y + D R+ I + +VLDG Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSRCT-DHRSGITVHNLDNVLDG 222 >gi|302672683|ref|XP_003026029.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8] gi|300099709|gb|EFI91126.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8] Length = 251 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 5/171 (2%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A LE+ G GG E + L RMYTR+A + ++ + + E G++ + ++ Sbjct: 5 ALLELKPGVGGAEGALFCVDLERMYTRYAAEHGWQLTPVNRSETESGGLREVLMEVRKGK 64 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE---ISESDCRIDTY 233 G E G HR+ RI +S+ R HTS +S+ V P+V++ D RI+ Sbjct: 65 GRGDF--ESGAHRVQRIPATESSGRVHTSTASVLVLPLVEEGTPTTTPLFKMEDVRIEVM 122 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 RA GAGGQHVN T+SAVR+THIPTG+VV Q ERSQH N+ +A+ +L ++L Sbjct: 123 RARGAGGQHVNKTESAVRLTHIPTGIVVAMQDERSQHVNRRRAFTVLTSRL 173 >gi|299140684|ref|ZP_07033822.1| peptide chain release factor 1 [Prevotella oris C735] gi|298577650|gb|EFI49518.1| peptide chain release factor 1 [Prevotella oris C735] Length = 370 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 11/246 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +E+ AG GG E+ +A L MY R+ + + + ++ +G G K I Sbjct: 112 DAKNVQMEIRAGTGGDEAALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG +K E GVHR+ R+ +SN R TS +++ V P D E+ I+E D + DT Sbjct: 172 SGTDVYGTMKYESGVHRVQRVPVTESNGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK +A + L + Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFI 290 Query: 285 YELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 ++ E QK ++IAN +S + +IR+Y P V D R L G++ Sbjct: 291 HDREHQKYVDDIANRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGNI 349 Query: 344 DDFMKA 349 D + A Sbjct: 350 QDMIDA 355 >gi|68486252|ref|XP_712983.1| hypothetical protein CaO19.8883 [Candida albicans SC5314] gi|46434408|gb|EAK93818.1| hypothetical protein CaO19.8883 [Candida albicans SC5314] Length = 394 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 20/232 (8%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG---------EADSNDAYLEVHA 123 +EL DD + +E + L+ I + Q E L+S + + +E+ Sbjct: 101 IELTEITDDPDLYKEAQEELKSIVI----PQIEKLVSELRVKLRPPVKYANKGCIIELRP 156 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ + LL MY +A + +K + + I A L I +Y ++ Sbjct: 157 GVGGNEASLFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRH 216 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI-------SESDCRIDTYRAS 236 E GVHR+ RI ++ R HTS +++ V P + + E + + + RIDT RA Sbjct: 217 ESGVHRVQRIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAG 276 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 G GGQHVNTTDSAVR+ HIPTG++V Q ERSQ NKA+A+ +LR++L + E Sbjct: 277 GKGGQHVNTTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKE 328 >gi|68486191|ref|XP_709944.1| hypothetical protein CaO19.1303 [Candida albicans SC5314] gi|46434441|gb|EAK93850.1| hypothetical protein CaO19.1303 [Candida albicans SC5314] gi|238881487|gb|EEQ45125.1| peptide chain release factor 1, mitochondrial precursor [Candida albicans WO-1] Length = 394 Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 82/233 (35%), Positives = 121/233 (51%), Gaps = 22/233 (9%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----------GEADSNDAYLEVH 122 +EL DD + +E + L+ I + Q E L+S AD +E+ Sbjct: 101 IELTEITDDPDLYKEAQEELKSIVI----PQIEKLVSELRVKLRPPVKYADKG-CIIELR 155 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+ + LL MY +A + +K + + I A L I +Y ++ Sbjct: 156 PGVGGNEASLFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMR 215 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI-------SESDCRIDTYRA 235 E GVHR+ RI ++ R HTS +++ V P + + E + + + RIDT RA Sbjct: 216 HESGVHRVQRIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRA 275 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 G GGQHVNTTDSAVR+ HIPTG++V Q ERSQ NKA+A+ +LR++L + E Sbjct: 276 GGKGGQHVNTTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKE 328 >gi|326520682|dbj|BAJ92704.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 236 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 112/184 (60%), Gaps = 12/184 (6%) Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +RMY R+ E +K + + + E+ G K+ + +KG Y LK E GVHR+ R+ + Sbjct: 6 VRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRVQRVPQTE 65 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + R HTS +++ + P D+ +++ I D + R+ GAGGQ+VN ++A+ + H PT Sbjct: 66 TMGRVHTSTATVAIMPEADE-VDVVIDPKDIELKAARSGGAGGQNVNKVETAIDLIHKPT 124 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE------IANIGESSKTEIGWGRQ 311 G+ + C +E+SQ +NK +A+ +LRAKLYE++L++++E + +G +++E + Sbjct: 125 GIRIFCTEEKSQLQNKERAFQLLRAKLYEIKLREQQESIRTQRLLQVGTGARSE-----K 179 Query: 312 IRSY 315 IR+Y Sbjct: 180 IRTY 183 >gi|121591760|ref|ZP_01678968.1| peptide chain release factor 1 [Vibrio cholerae 2740-80] gi|121546377|gb|EAX56631.1| peptide chain release factor 1 [Vibrio cholerae 2740-80] Length = 242 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 118/219 (53%), Gaps = 5/219 (2%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + + L +E L+ + Q + ++L+ E +EDD + + D Sbjct: 25 DPTVIGDQNKFRALSKEYSQLEEITQCFQAYQ-QAKEDLVAAEEMAQEDDAEMREMAQDE 83 Query: 92 LQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ K +E E +L D ND +LE+ AGAGG E+ +A L RMY+R+AEK Sbjct: 84 IKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEK 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + ++ E + + E G K + G AYG LK E G HR+ R+ ++ R HTS Sbjct: 144 KGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSAC 203 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTT Sbjct: 204 TVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTT 242 >gi|71000757|ref|XP_755060.1| mitochondrial translation release factor (RF-1) [Aspergillus fumigatus Af293] gi|66852697|gb|EAL93022.1| mitochondrial translation release factor (RF-1), putative [Aspergillus fumigatus Af293] gi|159128074|gb|EDP53189.1| mitochondrial translation release factor (RF-1), putative [Aspergillus fumigatus A1163] Length = 256 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 117/223 (52%), Gaps = 22/223 (9%) Query: 140 MYTRWAEKRKFKTEA--LEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 MYT + +R ++ L++ DG + + A + I AY L+ E GVHR+ R+ Sbjct: 1 MYTAFCSRRGLQSNVIKLDVQDGPSDDRLSEAVVEIDADGAYDLLRTESGVHRVQRVPAT 60 Query: 197 DSNSRRHTSFSSIWVYPV-------VDDSIEIEISESD-------CRIDTYRASGAGGQH 242 ++ R HTS S+ V P +D ++ + SD R + RASGAGGQH Sbjct: 61 ETKGRTHTSAVSVMVLPSFPEAGPSMDSALNFDDPNSDYYVDPQEVRTEKMRASGAGGQH 120 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANI 298 VN T+SA+R+THIPTG+VV Q RSQH N+ +AW +LRAKL E + RE E+ Sbjct: 121 VNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQVLRAKLAEARQEAREQELVELRRG 180 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +G G +IR+Y + D R+ I + +VLDG Sbjct: 181 VLGGVARMGRGDKIRTYNYGQSRCT-DHRSGITVHNLDNVLDG 222 >gi|66361428|pdb|1ZBT|A Chain A, Crystal Structure Of Peptide Chain Release Factor 1 (Rf-1) (Smu.1085) From Streptococcus Mutans At 2.34 A Resolution Length = 371 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/244 (33%), Positives = 129/244 (52%), Gaps = 11/244 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + LE+ AGG E+ +A LL Y ++AE + +K E E G+K + Sbjct: 121 DDKNIILEIRGAAGGDEAALFAGDLLNXYQKYAENQGWKFEVXEASANGVGGLKEVVAXV 180 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y LK E G HR+ R+ +S R HTS ++ + + +E EI D R+D Sbjct: 181 SGQSVYSKLKYESGAHRVQRVPVTESQGRVHTS-TATVLVXPEVEEVEYEIDPKDLRVDI 239 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE--LELQ 290 Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + ++ Sbjct: 240 YHASGAGGQNVNKVATAVRIIHLPTNIKVEXQEERTQQKNRDKAXKIIRARVADHFAQIA 299 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + E+ A K+ +G G +IR+Y P V D R + +L G LD+ + Sbjct: 300 QDEQDA----ERKSTVGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVI 354 Query: 348 KATL 351 A + Sbjct: 355 DALI 358 >gi|47218558|emb|CAG10257.1| unnamed protein product [Tetraodon nigroviridis] Length = 438 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 142/294 (48%), Gaps = 39/294 (13%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMY 141 L+E ++ + L + ++LL + DS++ LEV +G GG Q + + MY Sbjct: 142 LEEEEGHISQKLLSLRRDLVKALLPADPLDSSNVLLEVVSGRTTGGDICQQFTREVFDMY 201 Query: 142 TRWAEKRKFKTEALEIHDGE------------EAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +A + + E + + E G+ A I G N Y LK E G HR Sbjct: 202 QGFASHKNWDFEPVNYTNAEYGCDVRGCCLLLSGGLHHAAARITGENVYRHLKHEGGTHR 261 Query: 190 LVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 + RI +SR HT ++ + P + +++ + D RIDT+R+ GAGGQ VNTT Sbjct: 262 VQRIPEVGLSSRMQRIHTGTMTVIILPQPAE-LDLHVDPKDLRIDTFRSRGAGGQSVNTT 320 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE------IANIGE 300 DSAVR+ H+PTG+ V+CQQ RSQ +N+ A LRA+LY+ L K + +G Sbjct: 321 DSAVRVVHLPTGIAVECQQSRSQLQNRDTAMRALRARLYQARLGKESQRRLSARRQQVGT 380 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S++E +IR+Y V D RT D+ +FM+ A++ Sbjct: 381 RSQSE-----RIRTYNFS-QDRVTDHRTGYTAR--------DIKEFMRGGQALQ 420 >gi|281425822|ref|ZP_06256735.1| peptide chain release factor 1 [Prevotella oris F0302] gi|281400083|gb|EFB30914.1| peptide chain release factor 1 [Prevotella oris F0302] Length = 370 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/248 (31%), Positives = 128/248 (51%), Gaps = 15/248 (6%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +E+ AG GG E+ +A L MY R+ + + + ++ +G G K I Sbjct: 112 DAKNVQMEIRAGTGGDEAALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAI 171 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + YG +K E GVHR+ R+ +SN R TS +++ V P D E+ I+E D + DT Sbjct: 172 SGTDVYGTMKYESGVHRVQRVPVTESNGRMQTSAATVAVLPEA-DKFEVNINEGDIKWDT 230 Query: 233 YRASGAGGQHVNTTDSAVRITH----IPTG----VVVQCQQERSQHKNKAQAWNMLRAKL 284 +R+SGAGGQ+VN +S VR+ + TG ++++C + R Q KNK +A + L + Sbjct: 231 FRSSGAGGQNVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFI 290 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 ++ E QK + +I K+ + G +IR+Y P V D R L G Sbjct: 291 HDREHQKY--VDDIASRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGG 347 Query: 342 DLDDFMKA 349 ++ D + A Sbjct: 348 NIQDMIDA 355 >gi|302759761|ref|XP_002963303.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii] gi|300168571|gb|EFJ35174.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii] Length = 391 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 155/315 (49%), Gaps = 37/315 (11%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFE 105 +E ++LD ++ IK ++ + + + L EL E +D + + S LQ EV Q + Sbjct: 84 KELRNLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHD 143 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQ--DWANMLLR--MYTRWAEKRKFKTEALEIHDGE 161 LL E D AG D +++ R Y ++A ++ E L I + Sbjct: 144 VLL--ELIPKDEAARSRAGKCSLMCLMFDMFHLIFRSWRYDKYAANNSWRFEVLSITTTD 201 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K A+ I G YG LK E GVHR+ R+ + R HTS +S+ + P ++ +++ Sbjct: 202 TRGYKEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANE-VDV 260 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV Q R Sbjct: 261 EIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDTR-------------- 306 Query: 282 AKLYELELQK----REEIA--NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 LYELE + R E+ IG S ++E +IR+Y P V D R + + + Sbjct: 307 --LYELERSRAAASRSELRQDQIGSSDRSE-----RIRTYNF-PQGRVTDHRVGVTQHAI 358 Query: 336 SDVLDG-DLDDFMKA 349 +++G L+ F+ A Sbjct: 359 EQIMEGIGLEIFVNA 373 >gi|119568099|gb|EAW47714.1| mitochondrial translational release factor 1-like, isoform CRA_c [Homo sapiens] Length = 271 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPT 257 RIDT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPT 268 >gi|166795305|ref|NP_001107656.1| peptide chain release factor 1-like, mitochondrial isoform b [Homo sapiens] gi|15680165|gb|AAH14428.1| MTRF1L protein [Homo sapiens] gi|56203459|emb|CAI18898.1| mitochondrial translational release factor 1-like [Homo sapiens] gi|193787809|dbj|BAG53012.1| unnamed protein product [Homo sapiens] Length = 271 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPT 257 RIDT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPT 268 >gi|332213667|ref|XP_003255946.1| PREDICTED: peptide chain release factor 1-like, mitochondrial isoform 2 [Nomascus leucogenys] Length = 271 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPT 257 RIDT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPT 268 >gi|114609871|ref|XP_001140771.1| PREDICTED: mitochondrial translational release factor 1-like isoform 5 [Pan troglodytes] Length = 271 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 S E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + I G AY +K E GVHR+ R+ + R HTS ++ + P + I + I+ D Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTE-INLVINPKDL 239 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPT 257 RIDT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 240 RIDTKRASGAGGQHVNTTDSAVRIVHLPT 268 >gi|149003371|ref|ZP_01828260.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69] gi|147758554|gb|EDK65552.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69] Length = 165 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 95/166 (57%), Gaps = 2/166 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLV Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLV 164 >gi|237830659|ref|XP_002364627.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49] gi|211962291|gb|EEA97486.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49] gi|221507504|gb|EEE33108.1| peptide chain release factor, putative [Toxoplasma gondii VEG] Length = 545 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 81/232 (34%), Positives = 130/232 (56%), Gaps = 3/232 (1%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 +A DA LE+ AG GG ++ ++ LL MY ++ R + L+I + E+ G + A+ Sbjct: 273 QALQGDAVLEIQAGVGGEDAALFSRDLLGMYEAFSLARGWVFRVLDIQETEKGGYRRASA 332 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCR 229 ++GP+A+ L E G+HR+ R+ P ++ R TS +++ V P + +I++S + Sbjct: 333 QVEGPDAFRLLSLEAGIHRVQRVPPTEARGRMQTSATAVTVLPRSGNLEDKIDLSPPTLK 392 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 ID RASG GGQ VN +++AVRITH PTGV V C + +SQ +NK+ A +LRA+L + + Sbjct: 393 IDFMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRTQSQMENKSLALELLRAQLLQQLM 452 Query: 290 -QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 Q EE ++ K +IR+Y Q +V D R + + LD Sbjct: 453 RQASEERGRALDAQKGSKDRSEKIRTYNFQ-RDVVTDHRCRMHVNGVEEFLD 503 >gi|226510582|ref|NP_001146175.1| hypothetical protein LOC100279745 [Zea mays] gi|219886065|gb|ACL53407.1| unknown [Zea mays] Length = 184 Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 99/155 (63%), Gaps = 1/155 (0%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ E+ +K + + + E G K+ + +KG Y LK E GVHR+ R+ ++ Sbjct: 1 MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ + P D+ +++ I D + T R+ GAGGQ+VN ++AV + H PTG+ Sbjct: 61 GRVHTSTATVAIMPEADE-VDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGI 119 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 + C +ERSQ +N+ +A+ +LRAKLYE++L++++E Sbjct: 120 RIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQE 154 >gi|256079594|ref|XP_002576071.1| peptide chain release factor [Schistosoma mansoni] gi|238661330|emb|CAZ32306.1| peptide chain release factor, putative [Schistosoma mansoni] Length = 1202 Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 81/240 (33%), Positives = 129/240 (53%), Gaps = 23/240 (9%) Query: 111 EADSNDAY-LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE--IHDGEEA---- 163 E D N A +E+ AGAGG E+ +A+ L+ MY +A ++ + L + EE Sbjct: 149 ERDLNSAVIMELFAGAGGKEAGLFAHDLMNMYHAFAVQQNWSFTVLHKTVMSNEECAPSH 208 Query: 164 -------------GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 G + + AYG LK E GVHR+ R+ S ++ HTS ++ Sbjct: 209 NETSLSYVRVEIEGEPTTEAGVMSLGAYGQLKWEAGVHRVQRVPVTSSQNKIHTSTVAVS 268 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P +D ++++I ++D + + +R +G GGQ+VN + SAVR+TH+PTG+V+ CQ+ER QH Sbjct: 269 IQPKYED-VDVDIPDNDLKWEFHRPTGPGGQNVNKSTSAVRLTHLPTGIVISCQRERYQH 327 Query: 271 KNKAQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A +ML+ +L E+ L+ + I +I S + +IR+Y P V D R N Sbjct: 328 VNKILALDMLKERLREIHLKSQSHLIDSIRRSHLGNLDRSEKIRTYNF-PQDRVTDHRLN 386 >gi|156084766|ref|XP_001609866.1| peptide chain release factor 2 [Babesia bovis T2Bo] gi|154797118|gb|EDO06298.1| peptide chain release factor 2, putative [Babesia bovis] Length = 281 Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 115/226 (50%), Gaps = 24/226 (10%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE----------------KRKFKTEA 154 E D N + + AG GGTE+ D+ ML RMY R+ + R Sbjct: 39 EYDKNHCKVTITAGVGGTEAFDFCKMLGRMYKRFIQHYCQPESWNRELYGDLPRSLHYVD 98 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 + G++AG + + G AY KGE+G HRLVR SPY++ +R T+FSS+ V P+ Sbjct: 99 GTVVPGDKAGYRILEFEVHGDYAYKLFKGEKGTHRLVRNSPYNAMRKRQTTFSSVQVVPL 158 Query: 215 VD-DSIEIE-------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 + D +++ ++E D ++T R+ G GGQ+VN ++AVRITH TG+ V+ Q E Sbjct: 159 LSADDRDVQHYESSKHVTEKDVIVETMRSGGKGGQNVNKVETAVRITHKKTGLSVRVQTE 218 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 RSQ +N+ A + + ++ E N + E WGR + Sbjct: 219 RSQSQNREIAMRRISEMVDAHYKEQLREKCNELRGEEVEADWGRHM 264 >gi|226356572|ref|YP_002786312.1| peptide chain release factor 1 [Deinococcus deserti VCD115] gi|259585218|sp|C1CWJ1|RF1_DEIDV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226318562|gb|ACO46558.1| putative Peptide chain release factor 1 (RF-1) [Deinococcus deserti VCD115] Length = 366 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 108/317 (34%), Positives = 163/317 (51%), Gaps = 32/317 (10%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L+RER+ L++ + +E L + + ELA E + E + L+++ E+E Sbjct: 47 LLREREALESDLRGAQE----LLSDPDMRELAQNE-----ITEATARLEQLGAELEVL-- 95 Query: 105 ESLLSGEADS-NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LL + D + LE+ AGAGG E+ + LLRMYTR+AE R + LE + + Sbjct: 96 --LLPTDPDDLKNVILELRAGAGGAEAGLFVMDLLRMYTRYAEDRGLRLNVLEASESDLG 153 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G I G A+ K E+GVHR+ R+ +S R HTS ++ V P + E+++ Sbjct: 154 GASKVVAEISGEFAFRAFKWERGVHRVQRVPATESQGRIHTSTVTVAVLPEAEQG-EVQL 212 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWNML 280 S+ RID +R+ GAGGQ VNTTDSAVR + P ++V CQ RSQ KN+ +A +L Sbjct: 213 DLSEVRIDVFRSQGAGGQGVNTTDSAVRAVYRAGTPDEIMVVCQDGRSQIKNREKALVVL 272 Query: 281 RAKLYELEL------QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE-KT 333 ++L E E + R+ A +G ++E +IR+Y P V D R + K Sbjct: 273 ASRLAERERAARDAQEARDRAAQVGSGERSE-----KIRTYNY-PQNRVTDHRLEGDSKN 326 Query: 334 SPSD-VLDGDLDDFMKA 349 P D V+ G L + A Sbjct: 327 HPLDSVMAGGLGPVVSA 343 >gi|323964710|gb|EGB60181.1| peptide chain release [Escherichia coli M863] Length = 160 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/147 (42%), Positives = 97/147 (65%), Gaps = 6/147 (4%) Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER Sbjct: 2 TVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 61 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYVLQPYQMVK 324 SQHKNKA+A ++L A+++ E+ KR++ + + +G G + R+Y P V Sbjct: 62 SQHKNKAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVT 118 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATL 351 D R N+ +V++G LD ++ + Sbjct: 119 DHRINLTLYRLDEVMEGKLDMLIEPII 145 >gi|255023944|ref|ZP_05295930.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208] Length = 184 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 105/171 (61%), Gaps = 11/171 (6%) Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ +S R HTS +++ + P ++ +EIE+ + D R DT+ ++GAGGQ VNT Sbjct: 5 GAHRVQRVPETESGGRIHTSTATVAILPEAEE-VEIELHDKDIRTDTFASTGAGGQSVNT 63 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEI-ANIGESSK 303 T SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ E + REE AN K Sbjct: 64 TMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDAN----RK 119 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +G G +IR+Y P V D R + +++G LD+ + A + Sbjct: 120 SAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALI 169 >gi|167948500|ref|ZP_02535574.1| peptide chain release factor 2 (programmed frameshift) [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 105 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/102 (58%), Positives = 76/102 (74%), Gaps = 1/102 (0%) Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH PTG+VVQCQ +RSQHKNK QA L+AKLYELE+QK+ E E +K++IGW Sbjct: 1 MRITHNPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELEIQKQRETQQAVEDTKSDIGWD 60 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL + +KDLRTN+E + VLDG LD F++A+L Sbjct: 61 SQIRSYVLDASR-IKDLRTNVETGNTQAVLDGGLDIFIEASL 101 >gi|163803524|ref|ZP_02197393.1| protein chain release factor B [Vibrio sp. AND4] gi|159172659|gb|EDP57512.1| protein chain release factor B [Vibrio sp. AND4] Length = 103 Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 1/100 (1%) Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG Q Sbjct: 1 MTHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQ 60 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL + +KDLRT +E + VLDGDLD F++A+L Sbjct: 61 IRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDKFIEASL 99 >gi|302420205|ref|XP_003007933.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102] gi|261353584|gb|EEY16012.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102] Length = 253 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 28/185 (15%) Query: 140 MYTRWAEKRKFKTEAL--EIHDGE--------EAGIKSATLLIKGPNAYGWLKGEQGVHR 189 MY ++ ++ AL E+ DG E ++ A L IK AYG +GE G+HR Sbjct: 1 MYKQYCAYMGYRAVALKYEMADGAGSASTSAGEEPLQEAVLEIKDAGAYGLFRGEAGMHR 60 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE------------------ISESDCRID 231 + R+ + + R HTS ++WV P DS E + ++ RI+ Sbjct: 61 VQRVPDTEKSGRTHTSAVAVWVLPSFPDSHEAAGGGGGGDMNVDDPASDFYLDPAELRIE 120 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RA GAGGQHVN T+SA+R+TH+PTG VV Q R Q +N+ AW ++R+++ L + Sbjct: 121 TMRARGAGGQHVNKTESAIRMTHLPTGTVVSMQDSRQQSRNREDAWKLMRSRVALLRREA 180 Query: 292 REEIA 296 REE A Sbjct: 181 REEQA 185 >gi|302857242|ref|XP_002959826.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f. nagariensis] gi|300254224|gb|EFJ39110.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f. nagariensis] Length = 194 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 55/100 (55%), Positives = 72/100 (72%), Gaps = 1/100 (1%) Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG L E GVHR+ R+ ++ R HTS ++ V P D+ +++++ + D RI+T RASG Sbjct: 95 YGTLLPESGVHRVQRVPVTEAQGRVHTSTVAVVVLPQADE-VDVKLRDEDLRIETMRASG 153 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 AGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N+A A Sbjct: 154 AGGQHVNVTDSAVRITHVPTGLVVSCQNERSQHLNRAAAL 193 >gi|146332693|gb|ABQ22852.1| mitochondrial peptide chain release factor 1 precursor-like protein [Callithrix jacchus] Length = 192 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/131 (47%), Positives = 88/131 (67%), Gaps = 6/131 (4%) Query: 184 EQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 E G+HR+ RI +SR HT S+ + P D+ +++++ D RIDT+RA GAGG Sbjct: 1 EGGIHRVQRIPEVGLSSRMQRIHTGTMSVIILPQPDE-VDVKLDPKDLRIDTFRARGAGG 59 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVR+ HIPTG+VV+CQQERSQ +NK A ++LRA+LY+ ++K + Sbjct: 60 QHVNTTDSAVRLVHIPTGLVVECQQERSQIRNKEIALSVLRARLYQQIIEKNK--CQQHS 117 Query: 301 SSKTEIGWGRQ 311 + K ++G G Q Sbjct: 118 TRKLQVGTGAQ 128 >gi|1149684|emb|CAA60204.1| prfA [Clostridium perfringens] Length = 136 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/127 (50%), Positives = 88/127 (69%), Gaps = 7/127 (5%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +++ V P VDD +EIEI++ D +ID +RASG GGQ VNTTDSAVRITH+P+G+VV CQ E Sbjct: 2 ATVAVLPEVDD-VEIEINDKDIKIDVFRASGNGGQCVNTTDSAVRITHLPSGLVVSCQDE 60 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323 +SQ KNK +A +LRA+L+ E + E +A I E K+++G G +IR+Y P V Sbjct: 61 KSQLKNKEKAMKVLRARLF--EQAEAERLAGIAEDRKSQVGTGDRSERIRTYNY-PQGRV 117 Query: 324 KDLRTNI 330 D R N+ Sbjct: 118 TDHRINM 124 >gi|315254829|gb|EFU34797.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1] Length = 155 Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/142 (43%), Positives = 94/142 (66%), Gaps = 6/142 (4%) Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKN Sbjct: 2 PELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKN 61 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTN 329 KA+A ++L A+++ E+ KR++ + + +G G + R+Y P V D R N Sbjct: 62 KAKALSVLGARIHAAEMAKRQQAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRIN 118 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 + +V++G LD ++ + Sbjct: 119 LTLYRLDEVMEGKLDMLIEPII 140 >gi|169607138|ref|XP_001796989.1| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15] gi|160707160|gb|EAT86455.2| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15] Length = 294 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/231 (33%), Positives = 119/231 (51%), Gaps = 36/231 (15%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE---IHDGEEAGI--KSATLLIK 173 LE+ GAGG+E+ +A L RMY + + F+T L+ ++ EAG+ A I+ Sbjct: 61 LEIRPGAGGSEAAIFAGDLFRMYQTFCNRSGFRTSLLKYENVNGTTEAGVPLSEAIFEIE 120 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 +AYG + ++ + + I + + +++ Sbjct: 121 NADAYGVFRSQEDFE---------------------------NPESDYYIDQKEIKLEVM 153 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR- 292 RASGAGGQHVN T+SAVR+THIPT VV Q RSQHKNK AW+++R+++ +L +KR Sbjct: 154 RASGAGGQHVNKTESAVRLTHIPTNTVVSMQDSRSQHKNKESAWSLMRSRIAQLRREKRE 213 Query: 293 EEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 EE+ N+ S ++G G ++R+Y Q V D R+ I DV+ G Sbjct: 214 EEMVNLRRSVVGVAKMGRGDKVRTYNWG-QQRVTDHRSGITVHDLDDVMGG 263 >gi|71900150|ref|ZP_00682291.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1] gi|71730099|gb|EAO32189.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1] Length = 175 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 7/155 (4%) Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ + P D+ +I I+ +D +IDT+R+SGAGGQHVN T+SA+RITH+P Sbjct: 5 ESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRITHLP 64 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TGVVV+ Q ERSQH N+ +A L+A+L E E + ++ + K ++G G ++IR Sbjct: 65 TGVVVESQTERSQHANRDKAMKRLKAQLIESE--RSQQATAEAMTRKLQVGSGDRSQRIR 122 Query: 314 SYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFM 347 +Y P + D R N+ ++++GDLD + Sbjct: 123 TYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLI 156 >gi|256045467|ref|ZP_05448354.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. Rev.1] Length = 141 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/129 (48%), Positives = 90/129 (69%), Gaps = 7/129 (5%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+LY+ Sbjct: 3 DIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYD 61 Query: 287 LELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +E QK E + ++ ++++G G +IR+Y P V D R N+ V++G+L Sbjct: 62 MERQKAE--SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGEL 118 Query: 344 DDFMKATLA 352 D+ + A ++ Sbjct: 119 DELVDALIS 127 >gi|307688011|ref|ZP_07630457.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] Length = 80 Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 52/80 (65%), Positives = 63/80 (78%) Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +D YR SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+ Sbjct: 1 MDVYRTSGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEM 60 Query: 290 QKREEIANIGESSKTEIGWG 309 QK+ E +K++IGWG Sbjct: 61 QKKNAEKQAMEDNKSDIGWG 80 >gi|308478247|ref|XP_003101335.1| hypothetical protein CRE_13471 [Caenorhabditis remanei] gi|308263236|gb|EFP07189.1| hypothetical protein CRE_13471 [Caenorhabditis remanei] Length = 390 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 123/234 (52%), Gaps = 17/234 (7%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ +GAGG E+ + LL MY + A +K + L++ + G++SA + + G N Y Sbjct: 141 IELSSGAGGQEAMLFTGELLDMYQKLAASNSWKWDPLQVDNVPLGGVRSALIAVSGENVY 200 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 ++ E GVHR+ R+ D SR HTS SSI V P ++ + S+S +I+ RASG Sbjct: 201 AKMRFEAGVHRVQRVPVND--SRMHTSTSSISVLPEPEEVSVVVPSDSV-KIEAMRASGP 257 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN +AVR+TH TG+ V C ER QH N A+ L A L + ++ E I Sbjct: 258 GGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLE--KI 315 Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 K ++G +IR+Y Q + V D R + T +D+F+ A Sbjct: 316 VSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIQMAITG--------VDEFLSA 360 >gi|308454222|ref|XP_003089760.1| hypothetical protein CRE_07913 [Caenorhabditis remanei] gi|308269005|gb|EFP12958.1| hypothetical protein CRE_07913 [Caenorhabditis remanei] Length = 390 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 9/226 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ +GAGG E+ + LL MY + A +K + L++ + G++SA + + G N Y Sbjct: 141 IELSSGAGGQEAMLFTGELLDMYQKLAASNSWKWDPLQVDNVPLGGVRSALIAVSGENVY 200 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 ++ E GVHR+ R+ D SR HTS SSI V P ++ + S+S +I+ RASG Sbjct: 201 AKMRFEAGVHRVQRVPVND--SRMHTSTSSISVLPEPEEVSVVVPSDSV-KIEAMRASGP 257 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN +AVR+TH TG+ V C ER QH N A+ L A L + ++ E I Sbjct: 258 GGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLE--KI 315 Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 K ++G +IR+Y Q + V D R + T ++ L Sbjct: 316 VSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIQMAITGVNEFLSA 360 >gi|148703821|gb|EDL35768.1| mitochondrial translational release factor 1, isoform CRA_c [Mus musculus] Length = 436 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 105/194 (54%), Gaps = 17/194 (8%) Query: 104 FESLLSGEA-DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E L+ E D +D LEV +G GG Q + + MY ++ + +K E L Sbjct: 172 LERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPA 231 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217 + G+ A I G + Y LK E G+HR+ RI +SR HT S+ V P D+ Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D R+DT+RA GAGGQHVNTTD +VV+CQQERSQ KNK A Sbjct: 292 -VDVKVDPKDLRVDTFRARGAGGQHVNTTDR----------LVVECQQERSQLKNKEIAL 340 Query: 278 NMLRAKLYELELQK 291 +LRA+LY+ ++K Sbjct: 341 RVLRARLYQQIIEK 354 >gi|94984716|ref|YP_604080.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300] gi|119361533|sp|Q1J0S3|RF1_DEIGD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|94554997|gb|ABF44911.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300] Length = 370 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 88/258 (34%), Positives = 132/258 (51%), Gaps = 7/258 (2%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + E L R + L ++ +E D EL + D + Q ++ Sbjct: 22 DPAMLADPREYARLTRRHRELTPIVTLYREHAVLSSDLEGARELLADPDMRELAQGEIES 81 Query: 92 LQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++E + E LL + D+ + LE+ AGAGG E+ +A LLRMYTR+AE Sbjct: 82 LSARLAQIE-AELEVLLLPTDPDDAKNVILELRAGAGGAEAALFAVDLLRMYTRYAEGAG 140 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K L+ + + G + G A+ K E+GVHR+ R+ +S R HTS ++ Sbjct: 141 LKLNVLDASESDLGGASKVVAEVTGEFAFRAFKWERGVHRVQRVPATESQGRIHTSTVTV 200 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQE 266 V P + E+ + S+ RID +R+ GAGGQ VNTTDSAVR + P +VV CQ Sbjct: 201 AVLPEAEQG-EVSVDPSEVRIDVFRSQGAGGQGVNTTDSAVRAVYRPGTPDEIVVVCQDS 259 Query: 267 RSQHKNKAQAWNMLRAKL 284 RSQ KN+ +A +L ++L Sbjct: 260 RSQIKNREKALVVLASRL 277 >gi|290984795|ref|XP_002675112.1| predicted protein [Naegleria gruberi] gi|284088706|gb|EFC42368.1| predicted protein [Naegleria gruberi] Length = 156 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 4/151 (2%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L++ ++FI + +N LL+L+ E+D +++ +L + +E K+ ES LSG Sbjct: 2 LEDQLNFIDNTIADINNNEELLKLSEMENDKEMIEYIQKSLSDLINVLEKKEIESFLSGP 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYT---RWAEKRKFKTEALEIHDGEEAGIKSA 168 DS D YLE+H GAGG ++ DW+ MLL MY R +E F+ LE +E GI+SA Sbjct: 62 HDSKDCYLEIHTGAGGEDASDWSQMLLNMYINCLRGSELSSFEV-TLEDTSFKETGIRSA 120 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 L I G AYG+LK EQGVHRLVR+SP++++ Sbjct: 121 LLFISGRYAYGYLKHEQGVHRLVRLSPFNAD 151 >gi|149050029|gb|EDM02353.1| rCG37077, isoform CRA_a [Rattus norvegicus] Length = 436 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 72/194 (37%), Positives = 105/194 (54%), Gaps = 17/194 (8%) Query: 104 FESLLSGE-ADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E L+ E D ++ LEV +G GG Q + + MY ++ + ++ E L Sbjct: 172 LEHLVPKEKCDRSNVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWRFELLNYTPA 231 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDD 217 + G+ A I G + Y LK E G+HR+ RI +SR HT S+ V P D+ Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++++ D R+DT+RA GAGGQHVNTTD +VV+CQQERSQ KNK A Sbjct: 292 -VDVKVDPRDLRVDTFRARGAGGQHVNTTDR----------LVVECQQERSQLKNKEIAL 340 Query: 278 NMLRAKLYELELQK 291 +LRA+LY+ ++K Sbjct: 341 RVLRARLYQQIIEK 354 >gi|71008811|ref|XP_758238.1| hypothetical protein UM02091.1 [Ustilago maydis 521] gi|46097913|gb|EAK83146.1| hypothetical protein UM02091.1 [Ustilago maydis 521] Length = 526 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 81/259 (31%), Positives = 130/259 (50%), Gaps = 31/259 (11%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA---------------- 154 EA + A LEV G GG ES + + RMY R+ E++ + + Sbjct: 229 EAKAVGAVLEVRPGVGGQESTLFTAEVARMYQRFCEQKPVEEDGSGEWQVEMLSSTSVDV 288 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 G +G+K A + +KG + LK E GVHR+ RI S + TS ++ V P+ Sbjct: 289 STSSSGSGSGLKEAIIEVKGKGVFKKLKYEAGVHRVQRIPSTQSLGKLQTSTIAVMVLPI 348 Query: 215 VDDS---IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 + S + + D +++ R+ GAGGQHVN T+SA+R+TH PTG+ V Q RSQH+ Sbjct: 349 SEGSEHKADDLVDPKDVKVEVMRSRGAGGQHVNKTESAIRLTHEPTGISVSMQDSRSQHQ 408 Query: 272 NKAQAWNMLRAKLY------ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 N+ +AW +LRA+L E+E + +A + +++ ++R+Y P V D Sbjct: 409 NRTKAWAVLRARLLDRRLKQEVEGNRERRLAQVASMDRSD-----RVRTYNF-PQDRVTD 462 Query: 326 LRTNIEKTSPSDVLDGDLD 344 R N+ +++G+ D Sbjct: 463 HRINLSLNGIDAIMEGEHD 481 >gi|324506204|gb|ADY42656.1| Peptide chain release factor 1 [Ascaris suum] Length = 376 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 123/226 (54%), Gaps = 8/226 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 LEV AG GG E+ + + L+ MY +A + + ++ + + G++SA + + G AY Sbjct: 122 LEVTAGVGGIEAMLFTSELVDMYRNFAAFKGWTWTVMQQDNIQLGGVRSALIAVSGDEAY 181 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L+ E GVHR+ R+ P +R HTS +S+ V P + ++ + + +I+T RASG Sbjct: 182 GRLRFEAGVHRVQRM-PITDKTRMHTSTASVSVLPE-PEKVDAYVPSNSVKIETMRASGP 239 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN +AVR+TH +G+ V C ER QH N A+ L A L + ++ + E + Sbjct: 240 GGQNVNKRSTAVRVTHKSSGISVHCMDERFQHLNIQIAFRRLAAILMQEKMDRIYEKS-- 297 Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 + K ++G ++R+Y + + V D R + +DV+ G Sbjct: 298 AAARKLQVGSKARAEKVRTYNFKDDR-VTDHRLKKSWSRVTDVMRG 342 >gi|116334943|ref|YP_802438.1| putative peptide chain release factor A [Candidatus Carsonella ruddii PV] gi|116235224|dbj|BAF35072.1| putative peptide chain release factor A [Candidatus Carsonella ruddii PV] Length = 229 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 11/200 (5%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ G GG ES ++A + +MY ++ EK+ E + + K L ++ Sbjct: 7 IEIRQGIGGEESINFAKDIYKMYVKFFEKQNINFEIIS-----NSNFKEIILKVENNVFD 61 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 L E G+HR+ RI ++ R HTS +++V + D+ +++ D +I+ ++SG+ Sbjct: 62 KKLLNESGIHRVQRIPKSETQGRVHTSTCTVFVANINLDN-NLKLKNEDLKIEICKSSGS 120 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE---EI 295 GGQHVN T+SA++I H+PT + V+C ERSQ+ NK +A +L K+ L+ QK ++ Sbjct: 121 GGQHVNKTNSAIKIIHLPTKIAVECSDERSQNLNKTKALIILNMKI--LKFQKNNYNTQL 178 Query: 296 ANIGESSKTEIGWGRQIRSY 315 N+ + + ++IR+Y Sbjct: 179 NNVRKKLISNSERAKKIRTY 198 >gi|268552039|ref|XP_002634002.1| Hypothetical protein CBG20109 [Caenorhabditis briggsae] gi|187023852|emb|CAP37210.1| hypothetical protein CBG_20109 [Caenorhabditis briggsae AF16] Length = 389 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/226 (34%), Positives = 118/226 (52%), Gaps = 9/226 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ +GAGG E+ + LL MY + A +K + L++ G++SA + + G N Y Sbjct: 140 IELSSGAGGQEAMLFTGELLDMYQKLAATNSWKWDPLQVDSVPLGGVRSALIAVSGENVY 199 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 ++ E GVHR+ R+ DS R HTS +SI V P ++ + S+S +I+ RASG Sbjct: 200 SKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVVVPSDSV-KIEAMRASGP 256 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN +AVR+TH TG+ V C ER QH N A+ L A L + ++ E I Sbjct: 257 GGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLE--KI 314 Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 K ++G +IR+Y Q + V D R + T + L Sbjct: 315 VSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIGMAITGVEEFLSA 359 >gi|30694592|ref|NP_191278.2| peptide chain release factor, putative [Arabidopsis thaliana] gi|332646104|gb|AEE79625.1| putative peptide chain release factor [Arabidopsis thaliana] Length = 406 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 83/325 (25%), Positives = 168/325 (51%), Gaps = 15/325 (4%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQ 93 LW + ++ ++ + A+ +K+++ + + ++++L ++ D S+ ++ D+ Sbjct: 88 LWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSL 147 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + + + + LL + D+ A + + +G+ G +SQ W ++ MY +WAE+ Sbjct: 148 DVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNAR 207 Query: 154 ALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++G+ SAT+ + AYG+L GE+GVHRL+ S S S + + Sbjct: 208 VAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSATVDII 263 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 + S + E+ E D I +Y A + ++ V I HIP+GV +Q ER++ Sbjct: 264 PLFLRASPDFEVKEGDL-IVSYPAK----EDHKIAENMVCIHHIPSGVTLQSSGERNRFA 318 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ +A N L+AKL L + K ++++++ + SK + + RSYV + ++MV D +T + Sbjct: 319 NRIKALNRLKAKL--LVIAKEQKVSDVNKIDSKNILEPREETRSYVSKGHKMVVDRKTGL 376 Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355 E VLDG++ + A +++++ Sbjct: 377 EILDLKSVLDGNIGPLLGAHISMRR 401 >gi|281414235|ref|ZP_06245977.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665] Length = 129 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%) Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SG Q V SAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L L+K EE Sbjct: 1 SSGPASQSVGAPHSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRL--LLLRKAEE 58 Query: 295 IANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 A E + + WG Q+RSYVL PYQMVKDLRT E+ +PS V DG +DDF+ A + Sbjct: 59 DAKKKEMAGDVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGI 116 >gi|22135990|gb|AAM91577.1| putative protein [Arabidopsis thaliana] gi|30725574|gb|AAP37809.1| At3g57190 [Arabidopsis thaliana] Length = 372 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 83/325 (25%), Positives = 168/325 (51%), Gaps = 15/325 (4%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQ 93 LW + ++ ++ + A+ +K+++ + + ++++L ++ D S+ ++ D+ Sbjct: 54 LWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSL 113 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + + + + LL + D+ A + + +G+ G +SQ W ++ MY +WAE+ Sbjct: 114 DVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNAR 173 Query: 154 ALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++G+ SAT+ + AYG+L GE+GVHRL+ S S S + + Sbjct: 174 VAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSATVDII 229 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 + S + E+ E D I +Y A + ++ V I HIP+GV +Q ER++ Sbjct: 230 PLFLRASPDFEVKEGDL-IVSYPAK----EDHKIAENMVCIHHIPSGVTLQSSGERNRFA 284 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ +A N L+AKL L + K ++++++ + SK + + RSYV + ++MV D +T + Sbjct: 285 NRIKALNRLKAKL--LVIAKEQKVSDVNKIDSKNILEPREETRSYVSKGHKMVVDRKTGL 342 Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355 E VLDG++ + A +++++ Sbjct: 343 EILDLKSVLDGNIGPLLGAHISMRR 367 >gi|17542784|ref|NP_500737.1| hypothetical protein W03F8.3 [Caenorhabditis elegans] gi|6093954|sp|O44568|RF1M_CAEEL RecName: Full=Probable peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|2736385|gb|AAB94190.1| Hypothetical protein W03F8.3 [Caenorhabditis elegans] Length = 389 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/226 (34%), Positives = 118/226 (52%), Gaps = 9/226 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ GAGG E+ + LL MY + A +K + L++ + G++SA + + G Y Sbjct: 140 IELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWDPLQVDNVPLGGVRSALIAVSGEKVY 199 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 ++ E GVHR+ R+ DS R HTS +SI V P ++ + S+S +I+ RASG Sbjct: 200 AKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVVVPSDSV-KIEAMRASGP 256 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN +AVR+TH TG+ V C ER QH N A+ L A L + ++ E I Sbjct: 257 GGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQKQVDAMLE--KI 314 Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 K ++G +IR+Y Q + V D R + T ++ L Sbjct: 315 VSKRKLQVGSKARAEKIRTYNFQ-HDRVTDHRIQMSITGVAEFLSA 359 >gi|124808906|ref|XP_001348439.1| peptide chain release factor 1, putative [Plasmodium falciparum 3D7] gi|23497333|gb|AAN36878.1|AE014820_28 peptide chain release factor 1, putative [Plasmodium falciparum 3D7] Length = 304 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 17/215 (7%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSATLL 171 + N +E G GG E+ W+ LL Y +AE+ K K E ++ I D K + Sbjct: 62 NKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENLRI 121 Query: 172 IKGP-----NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 IK N Y K E G+H++ RI DS +R H+S +++ ++ + + EI+ Sbjct: 122 IKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEINLK 181 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +I T+R+S GGQ+VN +S V I H PTG+ +CQ+ER+Q NK A L K+ Sbjct: 182 DLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKIQH 241 Query: 287 LELQKREEIAN------IGESSKTEIGWGRQIRSY 315 +E +++E + I ES+++ +IR+Y Sbjct: 242 MESKEKENMVQHERAKLIKESNRSN-----RIRTY 271 >gi|6735298|emb|CAB68125.1| putative protein [Arabidopsis thaliana] Length = 409 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 169/328 (51%), Gaps = 18/328 (5%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQ 93 LW + ++ ++ + A+ +K+++ + + ++++L ++ D S+ ++ D+ Sbjct: 88 LWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSL 147 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD---WANMLLRMYTRWAEKRKF 150 + + + + LL + D+ A + + +G+ G +SQD W ++ MY +WAE+ Sbjct: 148 DVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQDLQIWTEQVVSMYIKWAERLGQ 207 Query: 151 KTEALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 E ++G+ SAT+ + AYG+L GE+GVHRL+ S S S + Sbjct: 208 NARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSATV 263 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + + S + E+ E D I +Y A + ++ V I HIP+GV +Q ER+ Sbjct: 264 DIIPLFLRASPDFEVKEGDL-IVSYPAK----EDHKIAENMVCIHHIPSGVTLQSSGERN 318 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLR 327 + N+ +A N L+AKL L + K ++++++ + SK + + RSYV + ++MV D + Sbjct: 319 RFANRIKALNRLKAKL--LVIAKEQKVSDVNKIDSKNILEPREETRSYVSKGHKMVVDRK 376 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T +E VLDG++ + A +++++ Sbjct: 377 TGLEILDLKSVLDGNIGPLLGAHISMRR 404 >gi|15806000|ref|NP_294700.1| peptide chain release factor 1 [Deinococcus radiodurans R1] gi|7388053|sp|P56905|RF1_DEIRA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|6458704|gb|AAF10553.1|AE001950_5 peptide chain release factor 1 [Deinococcus radiodurans R1] Length = 375 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 89/246 (36%), Positives = 129/246 (52%), Gaps = 17/246 (6%) Query: 45 LMRERQHLDNAISFIKEI-QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103 L+RER+ + +S +E+ QD + + ELA Q LQ E+E + Sbjct: 49 LVREREQAEADLSGARELLQDPDMRDPDMKELA---------QLEVGGLQARLAEIE-AE 98 Query: 104 FESLL--SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 E LL + D D LE+ AGAGG E+ + LLRMY R+A K L+ + + Sbjct: 99 LEVLLLPTDPDDGKDVILELRAGAGGAEAGLFVMDLLRMYERYAAGLNLKLNVLDAAESD 158 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G + G A+ LK E+GVHR+ R+ +S R HTS +++ V P + E+ Sbjct: 159 LGGASKVVAEVTGDFAFRALKWERGVHRVQRVPATESQGRIHTSTATVAVLPEAEPG-EV 217 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITH---IPTGVVVQCQQERSQHKNKAQAWN 278 + S+ RID +R+ GAGGQ VNTTDSAVR + P ++V CQ RSQ KN+ +A Sbjct: 218 NLDLSEVRIDVFRSQGAGGQGVNTTDSAVRAVYRAGTPDEIMVICQDGRSQIKNREKALQ 277 Query: 279 MLRAKL 284 +L A+L Sbjct: 278 VLTARL 283 >gi|213420646|ref|ZP_03353712.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 112 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 70/101 (69%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE+Q Sbjct: 11 LLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQ 70 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I Sbjct: 71 DWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKI 111 >gi|325119759|emb|CBZ55312.1| hypothetical protein NCLIV_057350 [Neospora caninum Liverpool] Length = 427 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 6/188 (3%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LEI G G + A L + P+A+ +L E G+HR+ R+ P ++ R TS +++ V P Sbjct: 200 LEIQAG--VGGEDAALFSR-PDAFRFLSLEAGIHRVQRVPPTEARGRMQTSATAVTVLPR 256 Query: 215 VDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 + +I++S +ID RASG GGQ VN +++AVRITH PTGV V C + +SQ +NK Sbjct: 257 SSNLEDKIDLSPPTLKIDFMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRTQSQTENK 316 Query: 274 AQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 A +LRA+L + ++K EE ++ K +IR+Y Q +V D R + Sbjct: 317 NLALELLRAQLLQQMMRKASEERGRAIDAQKGSKDRSEKIRTYNFQ-RDVVTDHRCRMHV 375 Query: 333 TSPSDVLD 340 D LD Sbjct: 376 NGVEDFLD 383 >gi|265991893|ref|ZP_06104450.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. Rev.1] gi|263002901|gb|EEZ15252.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. Rev.1] Length = 133 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/122 (47%), Positives = 85/122 (69%), Gaps = 7/122 (5%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK E Sbjct: 2 RASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAE 60 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + ++ ++++G G +IR+Y P V D R N+ V++G+LD+ + A Sbjct: 61 --SERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDAL 117 Query: 351 LA 352 ++ Sbjct: 118 IS 119 >gi|56755637|gb|AAW25997.1| SJCHGC05491 protein [Schistosoma japonicum] Length = 431 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/229 (34%), Positives = 119/229 (51%), Gaps = 22/229 (9%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRK--FKTEALEIHDGEEA------------- 163 +E+ AGAGG E+ +A+ LL MY A +R F + + EE Sbjct: 158 MELFAGAGGKEAGLFAHDLLIMYQALAIQRNWSFNIKQETVMSSEECTPSHNEKSLSYVR 217 Query: 164 ----GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G +A I AYG LK E GVHR+ R+ S ++ HTS ++ + P D Sbjct: 218 VEIQGEPTAESGILSLGAYGQLKWEAGVHRVQRVPVTSSQNKIHTSTVAVSIQPNYGDVD 277 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 S+ D + + +R +G GGQ++N + SAVR+TH+PTG++V CQ+ER QH NK A M Sbjct: 278 VDI-SDDDLKWEFHRPTGPGGQNLNKSTSAVRLTHLPTGIIVSCQRERHQHTNKKHALGM 336 Query: 280 LRAKLYELELQKR-EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 L+ KL +++L+ + I +I +S + +IR+Y P + D R Sbjct: 337 LKEKLRDIQLKSQLHLIDSIRQSHLGNLDRSEKIRTYNF-PQDRITDHR 384 >gi|302781616|ref|XP_002972582.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii] gi|300160049|gb|EFJ26668.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii] Length = 163 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/146 (44%), Positives = 91/146 (62%), Gaps = 19/146 (13%) Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +S+ + P V++ ++++I + +IDTYRA GA GQHVNTT SAVR+TH+PTG+V Sbjct: 1 RIHTSTASVAILPEVNE-VDVDIRNDEIKIDTYRAGGADGQHVNTTCSAVRVTHVPTGIV 59 Query: 261 VQCQQERSQHK------NKAQAWNMLRAKLYELELQK----REEIA--NIGESSKTEIGW 308 V Q ERS+HK NKA+A ++L A+LYELE + R E+ IG S ++E Sbjct: 60 VAIQDERSRHKEGPSARNKAKALSILYARLYELERSRAAASRSELQQDQIGSSDRSE--- 116 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTS 334 IR+Y P V D R + + S Sbjct: 117 --SIRTYNF-PQDRVTDHRVGVTQHS 139 >gi|242087755|ref|XP_002439710.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor] gi|241944995|gb|EES18140.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor] Length = 409 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 2/247 (0%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q LL G D A + V A + G S+ WA + MYT WA K+ +K +E Sbjct: 158 QMYKLLKGPYDKEGACIIVTAVSNGVTSELWAEKVFGMYTSWARKQGYKVGLIEKIFSTS 217 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 I+SA + I+ +G L GE+G+H+++ S +S+ + S + +D +++ Sbjct: 218 GHIQSAAMEIESEYMFGTLSGEKGMHQMIYSSLENSDIDQALSARVDIIPLFLDRPVDLH 277 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + + D I+T + + +AVR+ H+P+GV + ERS NK +A + L+A Sbjct: 278 LDDGD--IETSPSPSVHKKRGRRNGAAVRVQHVPSGVTAESSGERSYFANKLKATSRLKA 335 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 KL + + R + E + R Y P+++V DL T I+ + + VL+GD Sbjct: 336 KLLLVARELRVSDVKLINRQAIEDKCNSETRRYTFGPHKLVHDLNTGIQLSDLNSVLEGD 395 Query: 343 LDDFMKA 349 ++ F++ Sbjct: 396 IEPFIRG 402 >gi|124507187|ref|XP_001352190.1| peptide release factor, putative [Plasmodium falciparum 3D7] gi|23505221|emb|CAD52001.1| peptide release factor, putative [Plasmodium falciparum 3D7] Length = 404 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 120/237 (50%), Gaps = 10/237 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+ + +E+ AG GG E++ ++ L MY + R + E E+ + E K+ L I Sbjct: 125 DATEIKMEITAGVGGFEAKMFSKELFHMYENFCRVRNYDYEMKEVINDEAKENKNIVLYI 184 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY--PVVDDSI--EIEISESDC 228 +G N Y E G+HR+ R+ P +SN + TS S +++ D+I +I S+ D Sbjct: 185 RGNNIYEDFYQENGIHRVQRV-PINSN-KVQTSTSIVFICDEKKQKDNIMKKINFSKQDL 242 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL- 287 I T R+ GAGGQ VN ++ V+I H PT + V+ Q+ SQ NK A +L+ KLY Sbjct: 243 LIQTKRSGGAGGQSVNKNETCVKILHKPTNIFVEVQKTSSQIHNKNLAMQLLKDKLYNFY 302 Query: 288 -ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 EL+K + ++ K +IR+Y + ++ D TN + + + G + Sbjct: 303 YELEKNNFLKE-KKNQKQSADRSHKIRTYNF-LHDVIIDHITNTQYSGIQNFFKGHM 357 >gi|70951470|ref|XP_744973.1| peptide chain release factor 1 [Plasmodium chabaudi chabaudi] gi|56525140|emb|CAH78733.1| peptide chain release factor 1, putative [Plasmodium chabaudi chabaudi] Length = 260 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 27/198 (13%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR----------------KFKTEALE 156 + N +E G GG E++ W+N L + Y +AEK+ K T+ Sbjct: 20 NKNHIRIEFRPGIGGDEAELWSNELKKTYQNYAEKKKCSVKSVKDITNSIIIKSPTDVQI 79 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 DGEE I + Y K E G H++ RI +S + H+S ++I ++ + D Sbjct: 80 NKDGEEIQI----------SLYDLFKNESGTHQVKRIPKNESKDKIHSSTATIAIF-IQD 128 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D+ + EI+ D +I T+R+S GGQ+VN +S VRI HIPTG+ + Q+ER+Q NK A Sbjct: 129 DADKYEINSKDLKIMTFRSSKPGGQNVNKIESGVRIVHIPTGIQTESQEERTQELNKRIA 188 Query: 277 WNMLRAKLYELELQKREE 294 L K+++L +++EE Sbjct: 189 MKKLTQKIHDLRSREKEE 206 >gi|323333643|gb|EGA75036.1| Mrf1p [Saccharomyces cerevisiae AWRI796] Length = 311 Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 8/146 (5%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177 LE+ G GG E+ + LL MY +A RK+K + ++ E +GI A L I+ + Sbjct: 157 LELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGS 216 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRI 230 Y L+ E GVHR+ RI ++ R HTS +++ V P + D + E + R+ Sbjct: 217 YDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRV 276 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIP 256 D RASG GGQHVNTTDSAVR+THIP Sbjct: 277 DIMRASGKGGQHVNTTDSAVRLTHIP 302 >gi|221060184|ref|XP_002260737.1| Peptide chain release factor [Plasmodium knowlesi strain H] gi|193810811|emb|CAQ42709.1| Peptide chain release factor, putative [Plasmodium knowlesi strain H] Length = 263 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 22/196 (11%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 + N +E G GG E+ W+ LL Y +AE+ + E +HD E+ LL+ Sbjct: 20 NKNCVRIEFRPGVGGEEAFLWSTELLNTYKAFAERINCRVE--RVHDASES------LLV 71 Query: 173 KGPN--------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 P+ Y LK E G+H++ R+ +S + H+S ++I V+ D+ Sbjct: 72 VSPSDVCITQEGYEIKTTLYDLLKNESGIHQVKRVPRNESKGKIHSSTATIAVFLHEDEQ 131 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + EI+ D RI T+R+S GGQ+VN +S V I H PTG+ +CQ+ER+Q NK A Sbjct: 132 KKDEINLKDLRITTFRSSKPGGQNVNKIESGVSILHKPTGIKTECQEERTQEMNKKIAMK 191 Query: 279 MLRAKLYELELQKREE 294 L K+ + ++ EE Sbjct: 192 RLIQKVLQFRHKQSEE 207 >gi|297817036|ref|XP_002876401.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp. lyrata] gi|297322239|gb|EFH52660.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp. lyrata] Length = 409 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 82/328 (25%), Positives = 168/328 (51%), Gaps = 18/328 (5%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQ 93 LW + ++ ++ + + +K+++ + + ++++L ++ D S+ ++ D+ Sbjct: 88 LWDDPAKSDEILLKLADRAKTVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSL 147 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD---WANMLLRMYTRWAEKRKF 150 + + + + LL+ + D+ A + + +G+ +SQD W ++ MY +WAEK Sbjct: 148 DVSRSLHHYEMSKLLTDQYDAEGACMIIKSGSQDAKSQDLQIWTEQVVSMYIKWAEKLGQ 207 Query: 151 KTEALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 E ++G+ SAT+ + AYG+L GE+GVHRL+ S S S + Sbjct: 208 NARVAEKCSFLSNKSGVNSATIEFEFDFAYGYLLGERGVHRLI----ISSTSSEECSATV 263 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + + S + E+ E D I +Y A ++ ++ V I HIP+G+ V+ ER+ Sbjct: 264 DIIPLFLRASPDFEVKEDDL-IVSYPAK----ENHKIAENMVSIQHIPSGITVESSGERN 318 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLR 327 + N+ +A N L+AKL L + K ++I+++ + +SK + + R YV + +MV D + Sbjct: 319 RFANRIKALNRLKAKL--LVIAKEQKISDVNKINSKNILKPWEETRRYVSKGQKMVVDTK 376 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T +E VLDG++ + A +++++ Sbjct: 377 TGLEILDLKSVLDGNIGPLLGAHISMRR 404 >gi|323355075|gb|EGA86905.1| Mrf1p [Saccharomyces cerevisiae VL3] Length = 201 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 8/146 (5%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177 LE+ G GG E+ + LL MY +A RK+K + ++ E +GI A L I+ + Sbjct: 47 LELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGS 106 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRI 230 Y L+ E GVHR+ RI ++ R HTS +++ V P + D + E + R+ Sbjct: 107 YDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRV 166 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIP 256 D RASG GGQHVNTTDSAVR+THIP Sbjct: 167 DIMRASGKGGQHVNTTDSAVRLTHIP 192 >gi|156101992|ref|XP_001616689.1| peptide chain release factor 1 [Plasmodium vivax SaI-1] gi|148805563|gb|EDL46962.1| peptide chain release factor 1, putative [Plasmodium vivax] Length = 263 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 33/223 (14%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 + N +E G GG E+ W+ LL Y +AE+ + E +HD E+ L++ Sbjct: 20 NKNCIRIEFRPGVGGEEALLWSRELLNTYKTFAERMNCRVE--RVHDAGES------LVV 71 Query: 173 KGPN--------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 P+ Y K E G+H++ R+ +S + H+S ++I V+ D+ Sbjct: 72 TSPSDVCIAKQGQEIKASLYDLFKNESGIHQVKRVPRNESKGKIHSSTATIAVFLHTDEH 131 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + E++ D RI T+R+S GGQ+VN +S V I H PTG+ +CQ+ER+Q NK A Sbjct: 132 RKDEVNLKDLRIKTFRSSKPGGQNVNKIESGVSILHKPTGMQTECQEERTQEMNKKIALK 191 Query: 279 MLRAKLYEL------ELQKREEIANIGESSKTEIGWGRQIRSY 315 L K+ L E +RE + +SS++ R+IR+Y Sbjct: 192 RLTEKISHLRHKQSEEQLRRERSKLVKDSSRS-----RRIRTY 229 >gi|154270254|ref|XP_001535983.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150410054|gb|EDN05442.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 223 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 22/152 (14%) Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWV---YPVV----DDSIEIEISESDCRIDT---- 232 E GVHR+ R+ ++ R HTS S+ + YP + D + + SD ID Sbjct: 7 EAGVHRVQRVPTTENKGRTHTSAVSVVILPSYPSIIGEGDSELNFDDPNSDYYIDPQEVN 66 Query: 233 ---YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 RA GAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW++LRA++ + Sbjct: 67 VEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRR 126 Query: 290 QKREE------IANIGESSKTEIGWGRQIRSY 315 + REE +G +K +G G +IR+Y Sbjct: 127 EAREEEMVKLRRGVMGGVAK--MGRGDKIRTY 156 >gi|82540995|ref|XP_724771.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str. 17XNL] gi|23479536|gb|EAA16336.1| peptide chain release factor 1 [Plasmodium yoelii yoelii] Length = 2075 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 116/220 (52%), Gaps = 28/220 (12%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT--L 170 + N +E +G GG E++ W+N L ++Y +AEK+K ++ +K AT L Sbjct: 1835 NKNHVRIEFRSGIGGDEAELWSNELKKIYQNYAEKKKCTVKS----------VKDATNSL 1884 Query: 171 LIKGPN--------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 +IK PN Y K E G+H++ RI ++ + +S ++I V+ + D Sbjct: 1885 IIKSPNDVKINKEGEEIQISLYDLFKNESGIHQVKRIPKNENKEKIQSSTATIAVF-IQD 1943 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + + EI+ D +I T+R+S GGQ+VN +SAVRI H TG+ + Q+ER+Q NK A Sbjct: 1944 YANKYEINSKDLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESQKERTQELNKKIA 2003 Query: 277 WNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIRSY 315 L K+++L +++E+ + N + +IR+Y Sbjct: 2004 MKKLTQKIHDLRNREKEQSLQNERSKFTKDCSRSNRIRTY 2043 >gi|307943084|ref|ZP_07658429.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4] gi|307773880|gb|EFO33096.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4] Length = 217 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 1/174 (0%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 ++ A L V +G G E + +++L T A K + E +G SA L + Sbjct: 9 TDTARLLVTSGDGPRECRRAVSLVLARITTEAAKLRVNVEETLSTEGPNQDPASAILRLS 68 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G +A K G R SP+ + +R F ++ D E +S SD + +T+ Sbjct: 69 GKDASEIAKRWTGTIRWTCQSPFRPHHKRKNWFVGVFALATERDQTET-LSPSDLKFETF 127 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RA G GGQH NTTDSAVR+TH+PTG+ V + ERSQH+N+A A N L +LY L Sbjct: 128 RAGGPGGQHQNTTDSAVRLTHLPTGLSVVARDERSQHRNRAAALNRLHDRLYLL 181 >gi|213419806|ref|ZP_03352872.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 133 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 53/114 (46%), Positives = 75/114 (65%), Gaps = 6/114 (5%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR+ Sbjct: 1 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQ 60 Query: 294 EIANIGESSKTEIGWGRQI---RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 61 QAE--ASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLD 111 >gi|213583820|ref|ZP_03365646.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 95 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 1/92 (1%) Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 + QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG QIRSYVL Sbjct: 1 MTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDD 60 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +KDLRT +E + VLDG LD F++A+L Sbjct: 61 SR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 91 >gi|225714246|gb|ACO12969.1| Peptide chain release factor 1 [Lepeophtheirus salmonis] Length = 352 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 90/342 (26%), Positives = 152/342 (44%), Gaps = 67/342 (19%) Query: 43 KMLMRERQHLDNAISFIKEIQ-----------DRLCDNLILLELALEEDDC--SILQETS 89 ++ R H I++IK+I+ + L ++ L+ L+E + S+ QE Sbjct: 14 RLFHRNHPHFPEFINYIKDIESSPLRHENKLFNVLRSDIYALQTGLQEIEALKSMAQEEK 73 Query: 90 DNLQRI-----KLEVEYKQFESLLSGEA-------DSNDAYLEVHAGAGGTESQDWANML 137 D + + KLE + + + L+ D ++A LEV GAGG E+ +A + Sbjct: 74 DFEKEVLEDLSKLEPQVDELVTRLANNILISNQRYDQDNAVLEVLPGAGGLEASVFAAEV 133 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEA-------GIKSATLLIKGPNAYGWLKGEQGVHRL 190 +Y + R + +E+ + E I A++LIKG + Sbjct: 134 FNLYCSYC--RDYLGYNVEVQEHVETTGASDYFAISKASILIKGSKS------------- 178 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R TS S+ V P++ D I+++ SD + R+SG GGQ VNTT+SAV Sbjct: 179 ---------DRLQTSTRSLSVLPLLTDFSRIDVNPSDLSVTYCRSSGPGGQGVNTTNSAV 229 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW-- 308 R+ H PT + CQ+ R+ H+N A L+ +LY + +K E + + + K++IG Sbjct: 230 RMIHNPTKISAHCQELRTAHENYGLALEKLKRELYRVMFEK--ENSKVSSTRKSQIGQMN 287 Query: 309 -GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y ++ + K P +L DFMK Sbjct: 288 RNEKIRTYHYGRNTVLDHRIQGVVKQVP------NLFDFMKG 323 >gi|198421557|ref|XP_002128173.1| PREDICTED: similar to mitochondrial translational release factor 1-like [Ciona intestinalis] Length = 432 Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 7/249 (2%) Query: 98 EVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 E++ ESL++ + D++ A LEV G GG E+ +A + MY ++ + + + + Sbjct: 153 EIKTSIVESLVTDKDSEDNDGAVLEVTPGIGGVEAAMFATEIFDMYQKFCHRSGYDLDVV 212 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGW--LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 E GE + A ++ + Y + K E G+HR+ R+ + + R HTS S+ V P Sbjct: 213 EYDMGENGALVKANAVVSSGDGYAYSLFKHEAGIHRVQRVPKTEKSGRLHTSTVSVAVLP 272 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 ++ I + D +I ++SG GGQH N+T S + HIPTG +V+ ++ R Q N Sbjct: 273 KSNE-ILPPLQRKDLKITFSKSSGHGGQHANSTLSCAVVCHIPTGNIVRVEETRCQKTNL 331 Query: 274 AQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 +A L ++ ++ K+ ++ ++ +IR+Y + + D R + Sbjct: 332 DRAQQKLTHIVHSEAMKAKQAQVNSVRRKQTRSRERSDKIRTYNFH-HSRITDHRIGVTL 390 Query: 333 TSPSDVLDG 341 + + L+G Sbjct: 391 SGIEEFLNG 399 >gi|322492443|emb|CBZ27717.1| peptide chain release factor-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 439 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 3/167 (1%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + V AGG E+ +A L MY +A E R +K + DG EA S + G Sbjct: 183 INVEGKAGGEEASLFAAELAEMYRTYATEFRNWKVRPVVKDDGSEAA-SSNEFQVSGEGV 241 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y + E GVH++ R+ D+ + TS + + PV+D + +++ ESDC+ID R SG Sbjct: 242 YRNMHHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMPVLD-PVSVDVHESDCKIDFVRGSG 300 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 GGQ + ++ + V +TH P+G+ V+C Q RS NK A M+ ++ Sbjct: 301 PGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQMVAQQI 347 >gi|72386553|ref|XP_843701.1| peptide chain release factor 1 [Trypanosoma brucei TREU927] gi|62175752|gb|AAX69880.1| peptide chain release factor 1, putative [Trypanosoma brucei] gi|70800233|gb|AAZ10142.1| peptide chain release factor 1, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 459 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 10/180 (5%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA----- 168 +N LEV AGG E+ +A+ LL MY +A + + + ++ +G+ + S Sbjct: 189 TNTWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHWSVDVDGGEGDGEPVSSGGPAVG 248 Query: 169 ----TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 + +KG Y L+ E GVH++ R+ D + + TS + + + PV+D + +++ Sbjct: 249 GNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKMQTSTAVVTLMPVLD-PVSVDVH 307 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E DC I+ R SG GGQ + ++ +AV +TH P+G+ V+C Q RS NK A M+ +L Sbjct: 308 EKDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVAQQL 367 >gi|261326766|emb|CBH09739.1| peptide chain release factor 1, putative [Trypanosoma brucei gambiense DAL972] Length = 459 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 10/180 (5%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA----- 168 +N LEV AGG E+ +A+ LL MY +A + + + ++ +G+ + S Sbjct: 189 TNTWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHWSVDVDGGEGDGEPVSSGGPAVG 248 Query: 169 ----TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 + +KG Y L+ E GVH++ R+ D + + TS + + + PV+D + +++ Sbjct: 249 GNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKMQTSTAVVTLMPVLD-PVSVDVH 307 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E DC I+ R SG GGQ + ++ +AV +TH P+G+ V+C Q RS NK A M+ +L Sbjct: 308 ERDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVAQQL 367 >gi|154338826|ref|XP_001565635.1| peptide chain release factor-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062687|emb|CAM39130.1| peptide chain release factor-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 302 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 3/167 (1%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + V AGG E+ +A L MY +A E K++ + + DG EA S ++G Sbjct: 46 INVEGKAGGEEASLFAAELAEMYRTYAMEFCKWEVCPVAMDDGSEA-CSSNEFQVRGEGV 104 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y + E GVH++ R+ D+ + TS + + PV+D + +++ ESDC+ID R SG Sbjct: 105 YRNMHHEIGVHKVQRVPVTDATGKMQTSTAVFTLMPVLD-PVSVDVHESDCKIDFVRGSG 163 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 GGQ + ++ + V +TH P+G+ V+C Q RS NK A M+ ++ Sbjct: 164 PGGQGMQSSSNCVVLTHKPSGISVKCHQCRSALGNKELALQMVAQQI 210 >gi|218297204|ref|ZP_03497866.1| PCRF domain protein [Thermus aquaticus Y51MC23] gi|218242481|gb|EED09020.1| PCRF domain protein [Thermus aquaticus Y51MC23] Length = 148 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 2/94 (2%) Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 KLEV Y E+LL+ +A L + GAGGTE+ DWA MLLRMYTR+AE++ F+ E + Sbjct: 50 KLEVLYH--ETLLNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFEVEVV 107 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 ++ G EAG+ A +L+KG NAYG L E GVHR Sbjct: 108 DLRPGAEAGVDYAQILVKGENAYGLLSAEAGVHR 141 >gi|157870704|ref|XP_001683902.1| peptide chain release factor-like protein [Leishmania major] gi|68126969|emb|CAJ05291.1| peptide chain release factor-like protein [Leishmania major strain Friedlin] Length = 439 Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 88/163 (53%), Gaps = 3/163 (1%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + V AGG E+ +A L MY +A E R +K + DG EA S + G Sbjct: 183 INVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDDGSEAA-NSNEFQVCGEGV 241 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y ++ E GVH++ R+ D+ + TS + + PV+D + +++ E+DC+ID R SG Sbjct: 242 YRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMPVLD-PVSVDVHENDCKIDFVRGSG 300 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 GGQ + ++ + V +TH P+G+ V+C Q RS NK A M+ Sbjct: 301 PGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQMV 343 >gi|146088922|ref|XP_001466182.1| peptide chain release factor-like protein [Leishmania infantum JPCM5] gi|134070284|emb|CAM68621.1| peptide chain release factor-like protein [Leishmania infantum JPCM5] Length = 439 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + V AGG E+ +A L MY +A E R +K + DG EA S + G Sbjct: 183 INVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDDGSEAA-NSNEFQVCGEGV 241 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y ++ E GVH++ R+ D+ + TS + + PV+D + +++ ESDC+ID R SG Sbjct: 242 YRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMPVLD-PVSVDVHESDCKIDFVRGSG 300 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 GGQ + ++ + V +TH P+G+ V+C Q RS NK A Sbjct: 301 PGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELA 339 >gi|322499707|emb|CBZ34781.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 439 Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + V AGG E+ +A L MY +A E R +K + DG EA S + G Sbjct: 183 INVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDDGSEAA-NSNEFQVCGEGV 241 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y ++ E GVH++ R+ D+ + TS + + PV+D + +++ ESDC+ID R SG Sbjct: 242 YRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMPVLD-PVSVDVHESDCKIDFVRGSG 300 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 GGQ + ++ + V +TH P+G+ V+C Q RS NK A Sbjct: 301 PGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELA 339 >gi|221054928|ref|XP_002258603.1| peptide release factor [Plasmodium knowlesi strain H] gi|193808672|emb|CAQ39375.1| peptide release factor, putative [Plasmodium knowlesi strain H] Length = 407 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 133/248 (53%), Gaps = 16/248 (6%) Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANM 136 +DD L T +++ + L+ ++S+++ E D+ + +E+ G GG E++ + N Sbjct: 108 DDDIKELLRTIEDVGSLLLQEVVDFYKSVVNTEHHLDTEEVKVEITPGVGGLEAKLFCND 167 Query: 137 LLRMYTRWAEKRKFKTEAL--EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L MY ++ +++ F+ + E D ++ G +S +IKG Y E G+HR+ RI Sbjct: 168 LFSMYEQFCKEKNFQCNLIKGESEDTKD-GYRSIVAIIKGERVYEHFVQENGIHRVQRI- 225 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEI------SESDCRIDTYRASGAGGQHVNTTDS 248 P +S + TS S ++V ++S++ +I ++D I+T R+ GAGGQ VN ++ Sbjct: 226 PVNSK-KIQTSTSVVFVSD--EESLKKKIQKKMNFGKNDLLIETKRSGGAGGQSVNKNET 282 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIG 307 V+I H PT + V+ Q+ SQ +N++ A L+ KL+ Q+ +++ +S K Sbjct: 283 CVKILHKPTNLSVEVQKTSSQIQNRSMAIQALKNKLFSFYYQQEKDLYFKYKKSHKMSGD 342 Query: 308 WGRQIRSY 315 +IR+Y Sbjct: 343 RSEKIRTY 350 >gi|77415494|gb|AAI05974.1| MTRF1L protein [Homo sapiens] Length = 235 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 1/103 (0%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 190 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPT 232 >gi|56203460|emb|CAI18899.1| mitochondrial translational release factor 1-like [Homo sapiens] Length = 235 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 1/103 (0%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 190 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPT 232 >gi|114609873|ref|XP_001140447.1| PREDICTED: mitochondrial translational release factor 1-like isoform 1 [Pan troglodytes] Length = 235 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 1/103 (0%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ 190 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPT 232 >gi|237840539|ref|XP_002369567.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49] gi|211967231|gb|EEB02427.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49] gi|221503426|gb|EEE29124.1| peptide chain release factor, putative [Toxoplasma gondii VEG] Length = 497 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 59/282 (20%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW---------------------------- 144 + N A +E+ AGG E+Q WA L MYTR+ Sbjct: 180 NENVAIVEIRPAAGGEEAQLWATDLAEMYTRFFTLQKGWRFSQLQLGGPNAGSRPPTQQR 239 Query: 145 -----AEKRKF---KTEALEIHDGEEA------GIKSATLLIKGPNAYGWLKGEQGVHRL 190 + KR+ +++ DG A G+ ++GP Y L E GVHR+ Sbjct: 240 REDAVSGKRRAHANSSDSAAKDDGRSALSGALGGVTCIAFRVEGPGVYRQLLKESGVHRV 299 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSA 249 R+ ++ R HTS +++ + V + + +EI+++D I T R+SG GGQ+VN ++A Sbjct: 300 QRVPRTEAQGRIHTSTATVAI--VAEHNFRGVEINDADLVIRTARSSGCGGQNVNKVETA 357 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308 V + H+PTG+ V CQQER+Q NK A +L L +L + EE+ + E + ++ Sbjct: 358 VDLLHVPTGIRVFCQQERTQAANKKAAKAVL---LKKLAARHEEEVVQQMREERRDQVSS 414 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSD-------VLDGDL 343 G +RS ++ Y +D R N + + + VL+G L Sbjct: 415 G--LRSERVRTYNF-RDGRVNEHRLTGGEGLFSLKSVLEGQL 453 >gi|332213671|ref|XP_003255948.1| PREDICTED: peptide chain release factor 1-like, mitochondrial isoform 4 [Nomascus leucogenys] Length = 235 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 1/103 (0%) Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 131 LEVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ 190 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 191 PTE-INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPT 232 >gi|167933019|ref|ZP_02520106.1| Protein chain release factor B [candidate division TM7 single-cell isolate TM7b] Length = 106 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 49/95 (51%), Positives = 64/95 (67%), Gaps = 7/95 (7%) Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-- 297 GQ VNTTDSAVRITH+PTG+ V Q ERSQ +NK A +LR+KL +++ ++ E N Sbjct: 1 GQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETALKILRSKLAQIQTEQHAETINDL 60 Query: 298 -IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 GES+ WG QIR+Y+L PY ++KD RT E Sbjct: 61 RAGESA----NWGSQIRNYILHPYTLIKDTRTKYE 91 >gi|218682457|ref|ZP_03530058.1| peptide chain release factor-like protein [Rhizobium etli CIAT 894] Length = 186 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 82/154 (53%) Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G KSA + + G A G G R SP +R + ++ + ++ I Sbjct: 33 GAKSAVVSLDGLEAEGIASSYCGTIRFTFKSPARPGHKRQNWYVAVQRIDAGTEGGKVTI 92 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +D R +T RA G GGQH NTTDSAVRI H PTG++V+ + ERSQH+NKA A L A Sbjct: 93 DPADLRFETLRAGGPGGQHQNTTDSAVRILHRPTGLMVRARDERSQHRNKALALRRLEAM 152 Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 L +E++K+E + + I G +++S+ L Sbjct: 153 LRHIEVEKQEAAKSGRFVANRTIERGNEVKSFKL 186 >gi|297604413|ref|NP_001055378.2| Os05g0375600 [Oryza sativa Japonica Group] gi|255676317|dbj|BAF17292.2| Os05g0375600 [Oryza sativa Japonica Group] Length = 407 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 11/249 (4%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q LL G D A + V AG+ + MY+ WA K+ K +E Sbjct: 165 QMYKLLKGPYDKEGACIIVTAGSD--------ERIFCMYSSWARKQGCKDGLVEKITSTS 216 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 + +A + I+ +G L GE+G HR++ S ++ + TS + +D + + Sbjct: 217 GRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAGTYEATSARVDIIPLFLDRPVNLH 276 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + E+D I + H N SA+R+ HI TGV + ERS NK +A + L+A Sbjct: 277 LDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMKAISRLKA 333 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 KL + + R + E + R+ R Y P ++V DL T ++ + + VLDGD Sbjct: 334 KLLVISRELRSSNLKTIKRQTVEELYSRETRRYKFGPQKLVHDLNTGLQLSELNSVLDGD 393 Query: 343 LDDFMKATL 351 +D F++ + Sbjct: 394 IDPFIRGRI 402 >gi|95007275|emb|CAJ20495.1| peptide chain release factor 1, putative [Toxoplasma gondii RH] gi|221482780|gb|EEE21111.1| peptide chain release factor, putative [Toxoplasma gondii GT1] Length = 497 Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 52/261 (19%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRW---------------------------- 144 + N A +E+ AGG E+Q WA L MYTR+ Sbjct: 180 NENVAIVEIRPAAGGEEAQLWATDLAEMYTRFFTLQKGWRFSQLQLGGPNAGSRPPTQQR 239 Query: 145 -----AEKRKF---KTEALEIHDGEEA------GIKSATLLIKGPNAYGWLKGEQGVHRL 190 + KR+ +++ DG A G+ ++GP Y L E GVHR+ Sbjct: 240 REDAVSGKRRAHANSSDSAAKDDGRSALSGALGGVTCIAFRVEGPGVYRQLLKESGVHRV 299 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSA 249 R+ ++ R HTS +++ + V + + + + I+++D I T R+SG GGQ+VN ++A Sbjct: 300 QRVPRTEAQGRIHTSTATVAI--VAEHNFQGVAINDADLVIRTARSSGCGGQNVNKVETA 357 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGW 308 V + H+PTG+ V CQQER+Q NK A +L L +L + EE+ + E + ++ Sbjct: 358 VDLLHVPTGIRVFCQQERTQAANKKAAKAVL---LKKLAARHEEEVVQQMREERRDQVSS 414 Query: 309 GRQIRSYVLQPYQMVKDLRTN 329 G +RS ++ Y +D R N Sbjct: 415 G--LRSERVRTYNF-RDGRVN 432 >gi|15896625|ref|NP_349974.1| protein chain release factor B [Clostridium acetobutylicum ATCC 824] gi|15026468|gb|AAK81314.1|AE007835_3 Protein chain release factor B [Clostridium acetobutylicum ATCC 824] gi|325510788|gb|ADZ22424.1| Protein chain release factor B [Clostridium acetobutylicum EA 2018] Length = 204 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 8/179 (4%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPN 176 +L++ AG G ES + + L + + + R K E L+ GE+ G +KS L + G Sbjct: 2 WLQISAGTGPVESCRFVYLFLNLVKKECKYRNIKIEVLDFVPGEKIGTLKSVFLKLSGEG 61 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI--WVYPVVDDSIEIEISESDCRIDTYR 234 A + G H L+ S Y N RR F ++ + Y +D +++ D I+ R Sbjct: 62 AKTYASSITGTHLLIWESEYRKNHRRKNWFIAVNSFSYETNED-----LNDKDIIIEKMR 116 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +SG GGQHVN T++AVRITH TG+VV +ERSQ N A L +L +L ++R+ Sbjct: 117 SSGKGGQHVNKTETAVRITHKKTGIVVNSSEERSQFANIKLAKARLIIELKKLSDERRK 175 >gi|195351215|ref|XP_002042131.1| GM10257 [Drosophila sechellia] gi|194123955|gb|EDW45998.1| GM10257 [Drosophila sechellia] Length = 166 Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 42/72 (58%), Positives = 56/72 (77%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I++ I+E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A Sbjct: 6 IQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMK 65 Query: 279 MLRAKLYELELQ 290 LR++L + +L+ Sbjct: 66 RLRSRLVQQQLE 77 >gi|241205972|ref|YP_002977068.1| peptide chain release factor H [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859862|gb|ACS57529.1| peptide chain release factor H [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 204 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 97/201 (48%), Gaps = 4/201 (1%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKR--KFKTEALEIHDGEEAGIKSATLLIKGPN 176 L + AG G E + LL + R A + F+T + D + G KSA + + G Sbjct: 6 LLITAGNGPVECRMALAALLGILEREAVRLGCSFETNLGPMPD--QHGAKSAIVSLNGFE 63 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A G R S +R + S+ + E+ I +D R +T RA Sbjct: 64 AEQIANDYCGTIRFTFKSQVRPGHKRQNWYVSVQRIDTKPEGGEVTIDPADLRFETLRAG 123 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQH NTTDSAVR+ H PTG+V + ERSQH+NKA A L A L LE++K+E Sbjct: 124 GPGGQHQNTTDSAVRVLHRPTGLVATARDERSQHRNKALALRRLEAMLRHLEVEKQEAAK 183 Query: 297 NIGESSKTEIGWGRQIRSYVL 317 + + I G +++S+ L Sbjct: 184 SGRFIANRTIERGNEVKSFKL 204 >gi|218196675|gb|EEC79102.1| hypothetical protein OsI_19734 [Oryza sativa Indica Group] gi|222631381|gb|EEE63513.1| hypothetical protein OsJ_18329 [Oryza sativa Japonica Group] Length = 214 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 3/213 (1%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+ WA K+ K +E + +A + I+ +G L GE+G HR++ S ++ Sbjct: 1 MYSSWARKQGCKDGLVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAG 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 + TS + +D + + + E+D I + H N SA+R+ HI TGV Sbjct: 61 TYEATSARVDIIPLFLDRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGV 117 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 + ERS NK +A + L+AKL + + R + E + R+ R Y P Sbjct: 118 TAESSGERSYFANKMKAISRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRRYKFGP 177 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 ++V DL T ++ + + VLDGD+D F++ + Sbjct: 178 QKLVHDLNTGLQLSELNSVLDGDIDPFIRGRIV 210 >gi|169840002|ref|ZP_02873190.1| peptide chain release factor 2 [candidate division TM7 single-cell isolate TM7a] Length = 86 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/78 (53%), Positives = 56/78 (71%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 E+ I++ D RID YR+ G GGQ VNTTDSAVRITH+PTG+ V Q ERSQ +NK A + Sbjct: 4 EVNINDKDLRIDVYRSGGRGGQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETALKI 63 Query: 280 LRAKLYELELQKREEIAN 297 LR+KL +++ ++ E N Sbjct: 64 LRSKLAQIQTEQHAETIN 81 >gi|222872913|gb|EEF10044.1| predicted protein [Populus trichocarpa] Length = 245 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%) Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PTG+VVQCQ RSQH N+ AW LR+KLYE E+QKR E +KT++GWG QIRS Sbjct: 1 MPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGHQIRS 60 Query: 315 YVLQPYQMVKDLRTNIE 331 YVL +KDLRTN+E Sbjct: 61 YVLD-NSRIKDLRTNVE 76 >gi|71650872|ref|XP_814125.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener] gi|70879071|gb|EAN92274.1| peptide chain release factor 1, putative [Trypanosoma cruzi] Length = 456 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 26/229 (11%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 LEED S+L + N+ V ++ ES + + S LEV AGG E+ +A Sbjct: 141 LEEDMESLLNQVR-NMDDCVNGVMARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFAAE 199 Query: 137 LLRMYTRWAEK-RKFKTEALE--------------------IHDGEEAGIKSATLLIKGP 175 L MY ++ R ++ E E G+K + G Sbjct: 200 LAEMYREYSTGVRNWRIEEAENGAGGAAGGGGGGGDASALSAPALASTGVKFKAI---GD 256 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 N Y L+ E GVH++ R+ D + + TS + + + PV+ D + + + E+DC+I+ R Sbjct: 257 NVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMPVL-DPVSVNVHENDCKIEFVRG 315 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SG GGQ + ++ +AV +THIP+G+ V+C Q RS NK A ++ +L Sbjct: 316 SGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKEIALQLVAQQL 364 >gi|156081736|ref|XP_001608361.1| peptide release factor [Plasmodium vivax SaI-1] gi|148800932|gb|EDL42337.1| peptide release factor, putative [Plasmodium vivax] Length = 446 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 127/247 (51%), Gaps = 14/247 (5%) Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGE--ADSNDAYLEVHAGAGGTESQDWANM 136 +DD L +++ + L+ ++S+++ E D+++ LE+ G GG E++ + + Sbjct: 147 DDDVRQLLRAVEDVGSLLLQDVVDFYKSVVNAEHHLDTDEVKLEITPGVGGLEAKLFCSD 206 Query: 137 LLRMYTRWAEKRKFKTEALEIH-DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LL MY + + + F+ + D + G ++ ++KG Y E G+HR+ R+ P Sbjct: 207 LLSMYEHFCKLKDFQCTLIRGESDDAKDGHRNIVAVVKGERVYEHFVQENGIHRVQRV-P 265 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISE------SDCRIDTYRASGAGGQHVNTTDSA 249 +S + TS S ++VY ++S+ +I + SD I+T R+ G GGQ VN ++ Sbjct: 266 VNSK-KIQTSTSVVFVYD--EESLRKKIKKKMNLKKSDLIIETKRSGGPGGQSVNKNETC 322 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGESSKTEIGW 308 V++ H PT + V+ Q+ SQ +N+ A L+ KL+ Q+ +++ S K Sbjct: 323 VKVLHKPTNISVEVQKTSSQMQNRNMAIEALKTKLFSFYYQQEKDLFFKCRRSHKMSGDR 382 Query: 309 GRQIRSY 315 +IRSY Sbjct: 383 SEKIRSY 389 >gi|218670324|ref|ZP_03519995.1| peptide chain release factor-like protein [Rhizobium etli GR56] Length = 175 Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 55/154 (35%), Positives = 82/154 (53%) Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G KSA + + G +A G G R SP +R + ++ + ++ I Sbjct: 22 GAKSAIVNLDGLHADRIAGGYCGKIRFTFESPVRPGHKRQNWYVAVQRIQAGPEGGQVTI 81 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 + +D R T RA G GGQH NTTDSAVR+ H PTG+VV + ERSQH+NKA A L A Sbjct: 82 NPADQRFQTLRAGGPGGQHQNTTDSAVRVLHRPTGLVVTARDERSQHRNKALALRRLEAM 141 Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 L ++E +K+E + + I G +++++ L Sbjct: 142 LRQVEAEKQEAAKSGRFIANRTIERGNEVKAFKL 175 >gi|242021553|ref|XP_002431209.1| peptide chain release factor, putative [Pediculus humanus corporis] gi|212516458|gb|EEB18471.1| peptide chain release factor, putative [Pediculus humanus corporis] Length = 413 Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 92/345 (26%), Positives = 158/345 (45%), Gaps = 49/345 (14%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L L+D ++ + +SF+ +++ + N +E K + R +D KEI+ C+ Sbjct: 51 LSDLYDNESMKKYISFI--ESDHVNFSDNFLEKKYIEEIRHSIDKK----KEIE---CEI 101 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L L + EE IL D + ++E+ + GG E Sbjct: 102 LALNTVNSEE---KILPHNFDGGEESQIEIH--------------------IFPAVGGEE 138 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 ++ +A L MY + + + EI + G L ++G Y L E GVHR Sbjct: 139 AKYFAEELFNMYVNYIIYKNWNCIRAEIKQDTKVG----HLTLQGNTIYNSLICEAGVHR 194 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ + R HTS S+ ++ ++ EI I+ D I+T R+ G GGQ+VN ++ Sbjct: 195 VQRVPETEKFGRTHTSTCSLNIFQKSLNN-EIIINPKDIIIETLRSGGPGGQNVNKVETR 253 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS--KTEIG 307 VRI HIPTG++++ Q+ R Q++NK +A+ L++ L L E+ N + + K + G Sbjct: 254 VRIKHIPTGLIIESQESRYQYENKIKAFKKLQSTL----LNMYEDKINSSKKATLKDQTG 309 Query: 308 ---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFM 347 + +IR+Y + D R N + L G +LDD + Sbjct: 310 NNDYSDKIRTYNFNQ-NRITDHRINYSLYNMDAFLSGGKELDDMI 353 >gi|124511698|ref|XP_001348982.1| peptide chain release factor, putative [Plasmodium falciparum 3D7] gi|23498750|emb|CAD50820.1| peptide chain release factor, putative [Plasmodium falciparum 3D7] Length = 352 Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 10/132 (7%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I++SD I T R+ G GGQ+VN ++AVRI H PT + V+ ER+Q NK A + Sbjct: 221 INKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKRIYE 280 Query: 283 KLYELELQ----KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 KL L+ + K+ E+AN K+ +G QIR+YVL +M+KD RTN+ T V Sbjct: 281 KLLYLQTEALKNKKYELAN-----KSLTHFGEQIRNYVLYGNKMIKDTRTNVFSTDIDKV 335 Query: 339 L-DGDLDDFMKA 349 L G++D F+ A Sbjct: 336 LYQGEIDIFIDA 347 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 5/106 (4%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRW----AEKRKFKTEALEIHDGEEAGIKSATL 170 N L + +G GGTE+ D+ NML MY ++ ++ K E ++I E GIK + Sbjct: 50 NSCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNE-VGIKKVEI 108 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 I G ++ E+G+HRLVR SP+++ +++ TSF + V P ++ Sbjct: 109 KIDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKMTSFVKVDVIPTLN 154 >gi|322829249|gb|EFZ32717.1| peptide chain release factor 1, putative [Trypanosoma cruzi] Length = 476 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 29/232 (12%) Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 LEED S+L + N+ V ++ ES + + S LEV AGG E+ +A+ Sbjct: 158 LEEDMESLLNQVR-NMDDCVNGVMARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFASE 216 Query: 137 LLRMYTRWAEK-RKFKTEALE-----------------------IHDGEEAGIKSATLLI 172 L MY ++ R ++ E E G+K + Sbjct: 217 LAEMYREYSTGVRNWRIEEAENGAGGGGGGAAGGGGGGDASALSAPALASTGVKFKAI-- 274 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y L+ E GVH++ R+ D + + TS + + + PV+ D + + + E+DC+I+ Sbjct: 275 -GDSVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMPVL-DPVSVNVHENDCKIEF 332 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R SG GGQ + ++ +AV +THIP+G+ V+C Q RS NK A ++ +L Sbjct: 333 VRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQL 384 >gi|46190861|ref|ZP_00121023.2| COG1186: Protein chain release factor B [Bifidobacterium longum DJO10A] Length = 115 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 1/102 (0%) Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PTG+VV Q ERSQ +N+A A +L+++L L + E + + WG Sbjct: 1 MRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLR-HEEEAKKKKELAGDIKASWG 59 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Q+RSYVL PYQMVKDLRT E + V DGD++ F++A + Sbjct: 60 DQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGI 101 >gi|261884219|ref|ZP_06008258.1| peptide chain release factor 2 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 115 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 68/114 (59%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 + N + K ++ + D L ELA EDD + ++ Q ++ ++ + +LSGE Sbjct: 2 ISNMLCKFKNVKSAISDAYELYELANAEDDEQTINSLFEDAQNLENKITNLEISMMLSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 DS +A + +H GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+ Sbjct: 62 DDSKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGL 115 >gi|325114215|emb|CBZ49772.1| putative peptide chain release factor 1 [Neospora caninum Liverpool] Length = 489 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 66/260 (25%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF---------------KTEALEI 157 ++N A +E+ AGG E+Q WA L MYTR+ E +K K+ AL+ Sbjct: 197 NANVAIVEIRPAAGGEEAQLWATDLAEMYTRFFELQKTWRFAQLQLAGPNAGSKSPALQR 256 Query: 158 HD---------------------------GEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 D G G+ ++GP Y L E GVHR+ Sbjct: 257 RDDAAPARRKSRAGSSRPTSKEEERNAVSGALGGVTCIAFRVEGPGVYRQLLKESGVHRV 316 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ + F + + E+D I T R+SG GGQ+VN ++AV Sbjct: 317 QRVPRTETQN-----FQGVA------------LDEADLVIRTARSSGCGGQNVNKVETAV 359 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGWG 309 + H PTG+ + CQQER+Q NK A +L L +L + EE+ + E + ++ G Sbjct: 360 DLLHAPTGIRIFCQQERTQAANKKAAKEIL---LKKLAARHEEEVVQQMREERREQVCSG 416 Query: 310 RQIRSYVLQPYQMVKDLRTN 329 +RS ++ Y +D R N Sbjct: 417 --LRSERVRTYNF-RDGRVN 433 >gi|332878808|ref|ZP_08446523.1| putative peptide chain release factor H [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683159|gb|EGJ56041.1| putative peptide chain release factor H [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 235 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 +++ AG G E Q +L+++ + A ++ + +G+ IKS T+ +KG Sbjct: 6 IQITAGRGPLECQWVVAKVLKVFLQEATQKGIDYTIVSREEGDANLTIKSVTVQLKGKEL 65 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIE-ISESDCRIDTYRA 235 +LK G V S + +R S W V + D ++ + SE D + T R+ Sbjct: 66 SAFLKSWLGTVCWVGKSTFRKFHQR-----SNWYIGVFELDQLQRQSFSERDVQFQTTRS 120 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQ+VN +SAVR TH+PTGV V Q RSQ NK A N LR KL E+ELQ+ E Sbjct: 121 QGNGGQNVNKVNSAVRATHLPTGVSVFAQDSRSQLDNKKLALNRLREKLAEIELQQLAEQ 180 Query: 296 ANIGESSKTEIGWGRQIRSY 315 A ++ T++ G +R++ Sbjct: 181 AQNHWNNHTQVQRGNPVRTF 200 >gi|60682199|ref|YP_212343.1| peptide chain release factor-like protein [Bacteroides fragilis NCTC 9343] gi|60493633|emb|CAH08422.1| putative peptide chain release factor [Bacteroides fragilis NCTC 9343] Length = 206 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 4/168 (2%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176 YL++ +G G E ++L R A+KRK + E LE G + S + ++G Sbjct: 5 YLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVALEGAG 64 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 +G + SPY + RR F + + + + E +E D R +T RAS Sbjct: 65 CDVLADEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESC---EATEDDIRYETLRAS 121 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 G GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL Sbjct: 122 GPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKL 169 >gi|325267596|ref|ZP_08134248.1| peptide chain release factor RF2 [Kingella denitrificans ATCC 33394] gi|324980946|gb|EGC16606.1| peptide chain release factor RF2 [Kingella denitrificans ATCC 33394] Length = 202 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 81/171 (47%), Gaps = 13/171 (7%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-- 175 YL++ G E Q +A LR R AE E L + G++SA + + G Sbjct: 3 YLQLSTGQAPAECQYFARFALRQMLREAEAAGLDVEILS-ETPSKHGLRSAVVAVSGSLQ 61 Query: 176 --NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 A WL G + V SP+ N R F ++ P E E + R +T Sbjct: 62 DNFAQRWL----GTLQWVCASPFRPNHARKNWFVAVSRLPDFPALPE----EGEVRFETC 113 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 RA G GGQHVN T+SAVR H TG+ V+ + ERSQH NK +A +L KL Sbjct: 114 RAGGKGGQHVNKTESAVRAVHTATGISVRVESERSQHANKKRALELLAVKL 164 >gi|82538743|ref|XP_723804.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str. 17XNL] gi|23478225|gb|EAA15369.1| peptide chain release factor 1 [Plasmodium yoelii yoelii] Length = 358 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 75/242 (30%), Positives = 121/242 (50%), Gaps = 28/242 (11%) Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKF----KTEALEIHDGEEAGI-KSATLLIKGPNAY 178 G GG E++ +AN L MY + + + + K L I +G+ GI K+ IKG Y Sbjct: 106 GVGGQEAKMFANELFSMYEHFCKLKNYECLIKNNKL-IEEGK--GIYKNIVADIKGEGVY 162 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY--PVVDDSIE--IEISESDCRIDTYR 234 E G+HR+ RI P +S + TS S + ++ + +E ++I +++ I+T R Sbjct: 163 IDFIQEIGIHRVQRI-PINS-KKMQTSTSIVLLFDEKQTKEKLEKKMKIPKNEFLIETKR 220 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 + GAGGQ VN ++ V+I H PT + V+ Q+ SQ +NK+ A M++ KLY + +E Sbjct: 221 SGGAGGQSVNKNETCVKIIHKPTNIFVEVQKTSSQIQNKSIAMEMIKNKLYNFYYE--QE 278 Query: 295 IANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 N + K + G +IR+Y + V D N++ T +D F K T Sbjct: 279 KINFLKDKKNQKQNGDRSEKIRTYNF-SHNTVIDHIANVQYTG--------IDQFFKGTQ 329 Query: 352 AI 353 I Sbjct: 330 LI 331 >gi|254472541|ref|ZP_05085940.1| putative peptide chain release factor H [Pseudovibrio sp. JE062] gi|211958005|gb|EEA93206.1| putative peptide chain release factor H [Pseudovibrio sp. JE062] Length = 212 Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 1/125 (0%) Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 A + SA + + G A + K G + SP+ N +R F ++ PV + E Sbjct: 53 ANVASAEVTLAGEGAKTFAKAWCGTIKWTCQSPFRPNHKRQNWFIGVYELPV-SAAEAGE 111 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + D R +T RA G GGQH N T+SAVR+TH+PTG+ V + ERSQH+NK A L+ Sbjct: 112 FNAEDLRFETLRAGGPGGQHQNKTESAVRVTHVPTGLSVVARDERSQHRNKQIALQRLQE 171 Query: 283 KLYEL 287 KL L Sbjct: 172 KLSGL 176 >gi|53714002|ref|YP_099994.1| peptide chain release factor-like protein [Bacteroides fragilis YCH46] gi|253567006|ref|ZP_04844457.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265764352|ref|ZP_06092920.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52216867|dbj|BAD49460.1| putative peptide chain release factor [Bacteroides fragilis YCH46] gi|251944130|gb|EES84639.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263256960|gb|EEZ28306.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301163677|emb|CBW23231.1| putative peptide chain release factor [Bacteroides fragilis 638R] Length = 206 Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 4/168 (2%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176 YL++ +G G E ++L R A+KRK + E LE G + S + ++G Sbjct: 5 YLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVALEGAG 64 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 +G + SPY + RR F + + + + E +E D R +T RAS Sbjct: 65 CDVLADEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESR---EATEDDIRYETLRAS 121 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 G GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL Sbjct: 122 GPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKL 169 >gi|118581948|ref|YP_903198.1| class I peptide chain release factor [Pelobacter propionicus DSM 2379] gi|118504658|gb|ABL01141.1| Class I peptide chain release factor [Pelobacter propionicus DSM 2379] Length = 109 Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/77 (53%), Positives = 52/77 (67%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI E D RI+ YRASG GGQH NTTDSAVRI H+PTG+V Q + RSQ +N+ +A L Sbjct: 5 VEIREEDIRIEYYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQSRNRERAMERL 64 Query: 281 RAKLYELELQKREEIAN 297 A L + E ++ IA Sbjct: 65 TAALEKRERVVKKRIAT 81 >gi|148264585|ref|YP_001231291.1| class I peptide chain release factor [Geobacter uraniireducens Rf4] gi|146398085|gb|ABQ26718.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4] Length = 108 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/79 (50%), Positives = 57/79 (72%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + +EI ESD +I+ YRASG GGQH NTTDSAVRI H+PTG+VVQ + RSQ +N+ A + Sbjct: 1 MAMEIKESDIKIEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREVAMH 60 Query: 279 MLRAKLYELELQKREEIAN 297 L+ L + E + ++ +A+ Sbjct: 61 RLQEALLKRERKVKKRVAS 79 >gi|39996074|ref|NP_952025.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter sulfurreducens PCA] gi|39982839|gb|AAR34298.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens PCA] gi|298505090|gb|ADI83813.1| hydrolase, putative [Geobacter sulfurreducens KN400] Length = 107 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 8/104 (7%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++I ++D +++ YRASG GGQH NTTDSAVRI H+PTG+VVQ + RSQ +N+ +A L Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAMERL 62 Query: 281 RAKLYELELQKREEIANIGESSKTE--------IGWGRQIRSYV 316 R L + E + ++ IA E +G +++RS V Sbjct: 63 RIALEKRERKAKKRIATTVPRGAREKRLTEKKLVGMKKKLRSTV 106 >gi|68076525|ref|XP_680182.1| peptide chain release factor 1 [Plasmodium berghei strain ANKA] gi|56501082|emb|CAH94168.1| peptide chain release factor 1, putative [Plasmodium berghei] Length = 252 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 106/199 (53%), Gaps = 27/199 (13%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL-EIHDGEEAGIKSATLL 171 + N +E G GG E++ W+ L ++Y +A K+K K +++ +I + +L+ Sbjct: 12 NKNHIRIEFRPGIGGDEAELWSKELKKIYQSYANKKKLKVKSVKDI---------TNSLI 62 Query: 172 IKGPN--------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 IK PN Y K E G H++ RI ++ + +S ++I ++ + + Sbjct: 63 IKSPNDVKINKDGKEIQISLYDLFKNESGTHQVKRIPKNENKEKIQSSTATIAIF--IQN 120 Query: 218 SI-EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 I + EI+ D +I T+R+S GGQ+VN +SAVRI H TG+ + +ER+Q NK A Sbjct: 121 YINKYEINLKDLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESHEERTQELNKKIA 180 Query: 277 WNMLRAKLYELELQKREEI 295 L K+++L+ +++EE Sbjct: 181 MKRLTQKIHDLQNREKEEF 199 >gi|294668973|ref|ZP_06734059.1| putative peptide chain release factor H [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308965|gb|EFE50208.1| putative peptide chain release factor H [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 205 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 5/169 (2%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YL++ G E + +A +L+ AE R K E + ++ GI SA L+++G A Sbjct: 3 YLQISTAQGPAECRIFARFVLKKLLAEAEARNVKAE-IAGETADKHGILSAVLILEGAAA 61 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + QG + V SP R + I+ P + E+ SES+ T R+ G Sbjct: 62 DTLAQSWQGTLQWVCASPVRPKHPRKNWYIGIFRLP---EKPEMP-SESEIEFQTCRSGG 117 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 GGQHVN T+SAVR TH +G+ V+ + ERSQH NK +A +L K+ E Sbjct: 118 KGGQHVNKTESAVRATHKASGISVRVESERSQHANKKRALELLAYKMAE 166 >gi|255009670|ref|ZP_05281796.1| peptide chain release factor-like protein [Bacteroides fragilis 3_1_12] gi|313147455|ref|ZP_07809648.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12] gi|313136222|gb|EFR53582.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12] Length = 207 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 12/172 (6%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL-----I 172 YL++ +G G E ++L + A+ RK K E +E +EAG + TLL + Sbjct: 6 YLQITSGRGPVECCRVVALVLERILKQAQTRKLKVEIVE----KEAGPANRTLLSAVIAL 61 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G ++ +G + SPY + RR F + + + + E +E++ R +T Sbjct: 62 EGAGCDTLVEEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESR---EATENEIRYET 118 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 RASG GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL Sbjct: 119 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKL 170 >gi|146301198|ref|YP_001195789.1| peptide chain release factor-like protein [Flavobacterium johnsoniae UW101] gi|146155616|gb|ABQ06470.1| Class I peptide chain release factor [Flavobacterium johnsoniae UW101] Length = 229 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 6/173 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177 +++ AG G E +L+ A+ + L+ GEE G I++A++ +KG NA Sbjct: 5 IQITAGRGPAECTWVVAQVLKKVLEEAQDQNLDVVLLQREKGEENGTIETASISVKGKNA 64 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPVVDDSIEIEISESDCRIDTYRAS 236 ++K G + + S + +R F I+ + P + S+ SE+D + R+S Sbjct: 65 DQFVKSWIGTIQWIGQSQFRKMHKRKNWFIGIFEIEPQKNASV----SENDIQYQAMRSS 120 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 GAGGQHVN SA+R THIPTG+ V RSQH+NK A L KL + +L Sbjct: 121 GAGGQHVNKVSSAIRATHIPTGIAVVAMDSRSQHQNKKLATERLLKKLEDEKL 173 >gi|156086270|ref|XP_001610544.1| peptide chain release factor 1 [Babesia bovis T2Bo] gi|154797797|gb|EDO06976.1| peptide chain release factor 1, putative [Babesia bovis] Length = 276 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 26/191 (13%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 A + +E+ G GGTE+ WA L + + ++ + +K + E I S +L Sbjct: 16 ATNAQVVVEIRPGVGGTEANTWAQELAKAFKKFCQNKKCNVK--------EENIGSIIIL 67 Query: 172 -IKGPNAYGWLKG----------EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV----- 215 I+G + G E G+H++ R+ + R H+S +++ V P Sbjct: 68 HIQGDDDKFRENGCTGLEERFLREAGIHQVKRVPTSEKAGRMHSSTATVAVLPTELTKAK 127 Query: 216 --DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D +I I D T R+SGAGGQ+VN ++A +TH PTG+ ++ Q+ER+Q KNK Sbjct: 128 YEDILAKIVIDPRDIEWKTCRSSGAGGQNVNKVETAAALTHKPTGIRIESQEERTQSKNK 187 Query: 274 AQAWNMLRAKL 284 A L+ +L Sbjct: 188 EIALEKLKIQL 198 >gi|315497766|ref|YP_004086570.1| peptide chain release factor h [Asticcacaulis excentricus CB 48] gi|315415778|gb|ADU12419.1| peptide chain release factor H [Asticcacaulis excentricus CB 48] Length = 208 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 94/200 (47%), Gaps = 9/200 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL--IKGPN 176 L + +G G E L R +TR A K E I+ GEE A+LL + G Sbjct: 6 LHLTSGKGPDECCWVVAQLSRAFTREALKDGVACEV--INSGEEL---PASLLMSVTGDQ 60 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A ++ G + + SP+ +R F + + P D ++ + D T RAS Sbjct: 61 AQAFVSARVGTIQWIGDSPFRPRHKRRNWFVGVNIAPSPDAMPDLR--DEDIVFQTMRAS 118 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN TDSAVR TH TG+VV Q++RSQH N+ A L L E + + Sbjct: 119 GPGGQHVNKTDSAVRATHRSTGLVVTAQEQRSQHANRKLARQKLAVLLDEQRQKASDSAR 178 Query: 297 NIGESSKTEIGWGRQIRSYV 316 + S+ + G+ +R+Y Sbjct: 179 QVQWSAHQNLERGKSVRTYT 198 >gi|71393327|ref|XP_802218.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener] gi|70859733|gb|EAN80772.1| peptide chain release factor 1, putative [Trypanosoma cruzi] Length = 270 Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 1/111 (0%) Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G + Y L+ E GVH++ R+ D + + TS + + + PV+D + + + E+DC+I+ Sbjct: 69 GDSVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMPVLD-PVSVNVHENDCKIEFV 127 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R SG GGQ + ++ +AV +THIP+G+ V+C Q RS NK A ++ +L Sbjct: 128 RGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQL 178 >gi|260596640|ref|YP_003209211.1| putative peptide chain release factor [Cronobacter turicensis z3032] gi|260215817|emb|CBA28276.1| Putative peptide chain release factor homolog [Cronobacter turicensis z3032] Length = 240 Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 6/133 (4%) Query: 155 LEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 +E G AG ++SA + ++G NA + G + + SPY R F V+ Sbjct: 75 IEEEPGPRAGTLRSALVSLEGENAQPLAQRWCGTLQWICESPYRPRHARKNWFIGAAVFT 134 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 V D + +SD R D RASG GGQHVN TDSA+R TH+ +G+ V+ Q ERSQH NK Sbjct: 135 PVGD-----MPQSDIRFDALRASGPGGQHVNKTDSAIRATHVASGISVKVQSERSQHANK 189 Query: 274 AQAWNMLRAKLYE 286 A ++ KL E Sbjct: 190 RLATLLIAHKLEE 202 >gi|270659693|ref|ZP_06222357.1| peptide chain release factor 1 [Haemophilus influenzae HK1212] gi|270316971|gb|EFA28651.1| peptide chain release factor 1 [Haemophilus influenzae HK1212] Length = 170 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 59/101 (58%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + YLE+ AG GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + Sbjct: 49 DEYNCYLEIRAGTGGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKV 108 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 G YG LK E G HR+ R+ +S R HTS ++ V P Sbjct: 109 TGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMP 149 >gi|149197233|ref|ZP_01874285.1| putative peptide chain release factor 2 [Lentisphaera araneosa HTCC2155] gi|149139779|gb|EDM28180.1| putative peptide chain release factor 2 [Lentisphaera araneosa HTCC2155] Length = 125 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 5/87 (5%) Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V P D+++ E C+ +RASGAGGQHVNTTDSAVR+ H PTG+VVQ + RSQ Sbjct: 12 YVIPTEDEALFRE-----CQFSAFRASGAGGQHVNTTDSAVRLVHFPTGLVVQSSESRSQ 66 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIA 296 H+N+ LR L ++++ +A Sbjct: 67 HRNREICLKKLRQSLVMAGRKRKKRVA 93 >gi|222056398|ref|YP_002538760.1| Class I peptide chain release factor [Geobacter sp. FRC-32] gi|221565687|gb|ACM21659.1| Class I peptide chain release factor [Geobacter sp. FRC-32] Length = 108 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 39/77 (50%), Positives = 55/77 (71%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI E+D +++ YRASG GGQH NTTDSAVRI H+PTG+VVQ + RSQ +N+ A + L Sbjct: 3 MEIKETDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQAAENRSQWQNRELAMSRL 62 Query: 281 RAKLYELELQKREEIAN 297 + L + E + ++ IA Sbjct: 63 QQALIKRERKTKKRIAT 79 >gi|228472445|ref|ZP_04057207.1| putative peptide chain release factor H [Capnocytophaga gingivalis ATCC 33624] gi|228276130|gb|EEK14877.1| putative peptide chain release factor H [Capnocytophaga gingivalis ATCC 33624] Length = 231 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 +++ AG G E Q +L+ + + A + L +G+ +KS TL +KG Sbjct: 6 IQITAGRGPLECQWVVAKVLKTFLQEATQAGISYTILSREEGDANLTVKSVTLQLKGKEL 65 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIEI-SESDCRIDTYRA 235 +LK G V S + +R S W V + D ++ ++ SE D + T R+ Sbjct: 66 ASFLKTWLGTVCWVGKSTFRKFHQR-----SNWYIGVFELDQLQRQLFSERDVQFQTTRS 120 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQ+VN +SAVR TH+PTG+ V Q RSQ NK A L+ KL E+ELQ+ E Sbjct: 121 QGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQLAEQ 180 Query: 296 ANIGESSKTEIGWGRQIRSY 315 A ++ T++ G +R++ Sbjct: 181 AQNHWNNHTQVQRGNPVRTF 200 >gi|89093039|ref|ZP_01165990.1| peptide chain release factor 2 [Oceanospirillum sp. MED92] gi|89082689|gb|EAR61910.1| peptide chain release factor 2 [Oceanospirillum sp. MED92] Length = 207 Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 8/110 (7%) Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 QGV + SP+ +R F S VY + +++ + EI+ CR ASGAGGQHVN Sbjct: 74 QGVLLWICQSPFRPKHKRKNWFFSGQVYEIAEETNDGEITYQTCR-----ASGAGGQHVN 128 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 TTDSAVR TH+ +G+ V+ + ERSQH NK A ++ KL E Q REE Sbjct: 129 TTDSAVRATHVSSGISVRVESERSQHANKRLAKLLILQKLAE---QVREE 175 >gi|50122538|ref|YP_051705.1| peptide chain release factor-like protein [Pectobacterium atrosepticum SCRI1043] gi|49613064|emb|CAG76515.1| putative peptide chain release factor [Pectobacterium atrosepticum SCRI1043] Length = 207 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 14/182 (7%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG--- 174 L++ A G E L TR A ++ + E +E G+ AG ++SA +L+ G Sbjct: 4 LQLSAAQGPDECMLATAKALHALTRDAARQGIECEIIETEVGKRAGTLRSALVLLNGEQA 63 Query: 175 -PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 P A W G + SP+ R W V E ++ + R +T Sbjct: 64 EPLAASWC----GTLQWTCNSPWRKGGGRKN-----WFIGVARFHQEQAFADDEIRFETT 114 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 ++SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK A ++ +L L+ Q+ Sbjct: 115 KSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHA 174 Query: 294 EI 295 E+ Sbjct: 175 EL 176 >gi|326334366|ref|ZP_08200579.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693450|gb|EGD35376.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 233 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 +++ AG G E Q +L+++ + A + L +G+ +KS T+ +KG Sbjct: 6 IQITAGRGPLECQWVVAKVLKVFLQEATQAGISYTILSREEGDANLTVKSVTVQLKGKEL 65 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIE-ISESDCRIDTYRA 235 +LK G V S + +R S W V + D ++ + SE D + T R+ Sbjct: 66 AAFLKTWLGTVCWVGKSTFRKFHQR-----SNWYIGVFELDQLQRQPFSECDVQFQTTRS 120 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQ+VN +SAVR TH+PTG+ V Q RSQ NK A L+ KL E+ELQ+ E Sbjct: 121 QGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKFALARLKEKLIEIELQQLSEQ 180 Query: 296 ANIGESSKTEIGWGRQIRSY 315 A ++ T++ G +R++ Sbjct: 181 AQSHWNNHTQVQRGNPVRTF 200 >gi|239835036|ref|ZP_04683364.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301] gi|239823099|gb|EEQ94668.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301] Length = 136 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 5/128 (3%) Query: 190 LVRISPYDSNSRRHTSFSSI--WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 LV SP +R F S+ P ++D I I +D R +T RA G GGQH NT+D Sbjct: 10 LVFKSPVRPQHKRQHWFISVSRIARPAIND---IVIQPNDVRFETLRAGGPGGQHQNTSD 66 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ HIPTG+ + + ERSQH+NKA A L L L+ + E + I Sbjct: 67 SAVRVVHIPTGIQLIARNERSQHRNKATALERLEMVLKHLQEDEIENAEAVRHHENRNIE 126 Query: 308 WGRQIRSY 315 G +++++ Sbjct: 127 RGNEVKTF 134 >gi|261822834|ref|YP_003260940.1| peptide chain release factor-like protein [Pectobacterium wasabiae WPP163] gi|261606847|gb|ACX89333.1| peptide chain release factor H [Pectobacterium wasabiae WPP163] Length = 207 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 14/182 (7%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG--- 174 L++ A G E L+ R A ++ ++E +E G+ AG ++SA +L+ G Sbjct: 4 LQLSAAQGPDECMLATAKALQALIRDAARQGIESEIIETEAGKRAGTLRSALVLLNGEQA 63 Query: 175 -PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 P A W G + SP+ R W + E ++++ R +T Sbjct: 64 EPLAASWC----GTLQWTCNSPWRKGGGRKN-----WFIGIARFHQERAFADNEIRFETT 114 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 ++SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK A ++ +L L+ Q+ Sbjct: 115 KSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHA 174 Query: 294 EI 295 E+ Sbjct: 175 EL 176 >gi|322419681|ref|YP_004198904.1| Class I peptide chain release factor [Geobacter sp. M18] gi|320126068|gb|ADW13628.1| Class I peptide chain release factor [Geobacter sp. M18] Length = 106 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 35/60 (58%), Positives = 45/60 (75%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI ESD +++ YRASG GGQH NTTDSAVRI H+PTG+V Q + RSQ +N+ +A L Sbjct: 2 VEIKESDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQAQNREKALERL 61 >gi|213963016|ref|ZP_03391275.1| putative peptide chain release factor H [Capnocytophaga sputigena Capno] gi|213954357|gb|EEB65680.1| putative peptide chain release factor H [Capnocytophaga sputigena Capno] Length = 230 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 8/200 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 +++ AG G E Q +L+ + + A + L +G+ +KS TL +KG Sbjct: 6 IQITAGRGPLECQWVVAKVLKTFLQEAAQAGIDYTILSREEGDANLTVKSVTLQLKGKEL 65 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-DSIEIE-ISESDCRIDTYRA 235 +LK G V S + +R S W V + D ++ + SE D + T R+ Sbjct: 66 APFLKTWLGTVCWVGKSTFRKFHQR-----SNWYIGVFELDQLQRQTFSERDVQFQTTRS 120 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQ+VN +SAVR TH+PTG+ V Q RSQ NK A L+ KL E+ELQ+ E Sbjct: 121 QGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQLAEQ 180 Query: 296 ANIGESSKTEIGWGRQIRSY 315 A ++ T++ G +R++ Sbjct: 181 AQSHWNNHTQVQRGNPVRTF 200 >gi|313226924|emb|CBY22069.1| unnamed protein product [Oikopleura dioica] Length = 394 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 17/224 (7%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 ++ A V AGAGG E+ +A LL Y + E + E + D E + +++ Sbjct: 118 EAEKANFVVEAGAGGDEAGIFARELLDHYLLFFEFMNWDYEQVN-RDEENGMLTEGHIVV 176 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G NA+ E GVHR+ RI P ++ ++ HTS ++ V P+++ + I+I E + I + Sbjct: 177 SGLNAFNRNLAEAGVHRVARI-PQNA-TKLHTSTCAVKVTPILERRL-IDIPEKELDISS 233 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE--LQ 290 R SG GGQ +NT + + HIP+G+ + +N A N+ +AK EL LQ Sbjct: 234 CRGSGKGGQKINTVHARAVVKHIPSGITTTYFE---PGRNNTLAANIEKAK-EELRSILQ 289 Query: 291 KRE------EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 R+ E S T G +IR+Y +V D RT Sbjct: 290 ARQDAEFEREFLGFKNSMNTNFERGERIRNYSWSN-NIVTDYRT 332 >gi|12322377|gb|AAG51209.1|AC051630_6 peptide chain release factor, putative; 8726-9996 [Arabidopsis thaliana] Length = 255 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 34/57 (59%), Positives = 43/57 (75%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 CR++T+R SG GGQH N DSAVR+ H+PTG+V Q ++RSQHKN+A A N LR L Sbjct: 98 CRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 154 >gi|30692851|ref|NP_174601.2| peptide chain release factor, putative [Arabidopsis thaliana] gi|12322576|gb|AAG51290.1|AC027035_13 unknown protein [Arabidopsis thaliana] gi|26450075|dbj|BAC42157.1| putative peptide chain release factor [Arabidopsis thaliana] gi|29824307|gb|AAP04114.1| putative peptide chain release factor [Arabidopsis thaliana] gi|332193463|gb|AEE31584.1| Class I peptide chain release factor [Arabidopsis thaliana] Length = 257 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 34/57 (59%), Positives = 43/57 (75%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 CR++T+R SG GGQH N DSAVR+ H+PTG+V Q ++RSQHKN+A A N LR L Sbjct: 98 CRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 154 >gi|297851766|ref|XP_002893764.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp. lyrata] gi|297339606|gb|EFH70023.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp. lyrata] Length = 256 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 34/57 (59%), Positives = 43/57 (75%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 CR++T+R SG GGQH N DSAVR+ H+PTG+V Q ++RSQHKN+A A N LR L Sbjct: 97 CRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 153 >gi|224538378|ref|ZP_03678917.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus DSM 14838] gi|224520007|gb|EEF89112.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus DSM 14838] Length = 205 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 4/168 (2%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176 Y+++ +G G E ++L + A + KTE +E G + SA + ++G + Sbjct: 5 YMQITSGRGPAECCRVVALVLEKILKQAVAKGVKTEIVERETGPLNRTLLSAVISLQGGD 64 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + ++ +G + + SPY +R F + + + + E +E++ R +T RAS Sbjct: 65 YHALIEDWEGSVQWIAQSPYRIYHKRKNWFVGVQTFTLSESQ---EATEAEIRYETLRAS 121 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 G GGQHVN T+SAVR HIPTG+ V +RSQ +NK A L KL Sbjct: 122 GPGGQHVNKTESAVRAVHIPTGMSVVASDQRSQWQNKKLATERLLLKL 169 >gi|298386489|ref|ZP_06996045.1| peptide chain release factor H [Bacteroides sp. 1_1_14] gi|298260866|gb|EFI03734.1| peptide chain release factor H [Bacteroides sp. 1_1_14] Length = 206 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 6/169 (3%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176 YL++ +G G E ++L R A+ K E +E G + SAT+ ++G Sbjct: 6 YLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIALQG-T 64 Query: 177 AYGWLKGE-QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A G L E +G + + SPY +R F + + + + E +E D R +T RA Sbjct: 65 ASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVHSFVLSESQ---EATERDFRYETLRA 121 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SG GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL Sbjct: 122 SGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKL 170 >gi|126737179|ref|ZP_01752914.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6] gi|126721764|gb|EBA18467.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6] Length = 213 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 1/117 (0%) Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G KSA +L+ G A + K +G + S +R F ++ P + E I Sbjct: 52 GYKSAVVLVSGAEAEAFAKNWRGTIQWRAQSNLRPKHKRANWFIGVFDLPASVRTPE-RI 110 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 SD +DT+RA G GGQH NTTDSAVR TH PTG+ ++ERSQH+NKA A L Sbjct: 111 QASDVILDTFRAGGPGGQHQNTTDSAVRATHRPTGLSAVAREERSQHRNKALALERL 167 >gi|238022850|ref|ZP_04603276.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147] gi|237865658|gb|EEP66796.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147] Length = 206 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/174 (36%), Positives = 82/174 (47%), Gaps = 15/174 (8%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YL++ G E Q +A +LR R AE E L + GI SA + G A Sbjct: 3 YLQLSTGQSPAECQIFAQFVLRKILREAEAAGVAAELLS-QTASKHGILSAVFALSGAGA 61 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-----DDSIEIEISESDCRIDT 232 + G + + SP R + ++ P + DDSI R +T Sbjct: 62 EDLAQRWLGTLQWIGNSPVRPKHPRKNWYIGVFRLPQIPALPDDDSI---------RFET 112 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 RA G GGQHVN TDSAVR TH+ TGV V+ + ERSQH NK +A +L KL E Sbjct: 113 CRAGGKGGQHVNKTDSAVRATHLATGVSVRVESERSQHANKKRARELLALKLAE 166 >gi|302761444|ref|XP_002964144.1| hypothetical protein SELMODRAFT_405853 [Selaginella moellendorffii] gi|300167873|gb|EFJ34477.1| hypothetical protein SELMODRAFT_405853 [Selaginella moellendorffii] Length = 330 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 49/161 (30%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L SG D A + + AGAGGT+ Q E Sbjct: 141 QLIKLFSGTYDKERARITITAGAGGTDVQ------------------------------E 170 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 A IKSATL I +GE+G HRLV P+++ + R TSF+ + V +++++ EIE Sbjct: 171 AEIKSATLEID--------RGEKGTHRLVLCVPFNAKALRQTSFAGVEVTALLEEN-EIE 221 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 + + G GGQ++N ++AVR+THIPTG+ ++C Sbjct: 222 VE----------SGGKGGQNLNKVETAVRVTHIPTGIALRC 252 >gi|329848554|ref|ZP_08263582.1| putative peptide chain release factor H [Asticcacaulis biprosthecum C19] gi|328843617|gb|EGF93186.1| putative peptide chain release factor H [Asticcacaulis biprosthecum C19] Length = 208 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 5/204 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L + +G G E L + +TR ++ + L D EA S L + G A Sbjct: 6 LHISSGKGPDECCWVVTKLAQAFTREGAEQGVTCDVL---DAGEALPASLLLSVSGEAAP 62 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 +++ G + V SP+ +R F + + P ++ ESD T RASG Sbjct: 63 AFVRERIGTIQWVGDSPFRPLHKRRNWFVGVALAPSPQSVPDLR--ESDITFSTMRASGP 120 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN TDSAVR H PTG+V Q++RSQH N+ A L L E ++ + Sbjct: 121 GGQHVNKTDSAVRAVHRPTGLVATAQEQRSQHANRKLATLKLALMLEERRVEAGGQARRD 180 Query: 299 GESSKTEIGWGRQIRSYVLQPYQM 322 S+ + G +R+Y+ +++ Sbjct: 181 QWSAHQALERGNPVRTYIGPHFKL 204 >gi|253572326|ref|ZP_04849729.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838101|gb|EES66189.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 206 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 6/169 (3%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176 YL++ +G G E ++L R A+ K E +E G + SAT+ ++G Sbjct: 6 YLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIALQGA- 64 Query: 177 AYGWLKGE-QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A G L E +G + + SPY +R F + + + + E +E D R +T RA Sbjct: 65 ASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVHSFVLSESQ---EATERDFRYETLRA 121 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SG GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL Sbjct: 122 SGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKL 170 >gi|227112372|ref|ZP_03826028.1| peptide chain release factor-like protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 207 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 14/182 (7%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG--- 174 L++ A G E L TR A ++ E +E G+ AG ++SA +L+ G Sbjct: 4 LQLSAAQGPDECMLATTKALHALTRDAARQGVNCEIIETEAGKRAGTLRSALVLLNGEQA 63 Query: 175 -PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 P A W G + SP+ R W V E ++ + R + Sbjct: 64 EPLAANWC----GTLQWTCNSPWRKGGGRKN-----WFIGVARFHQEQAFADHEIRFEAT 114 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 ++SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK A ++ +L L+ Q+ Sbjct: 115 KSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHA 174 Query: 294 EI 295 E+ Sbjct: 175 EL 176 >gi|29346864|ref|NP_810367.1| peptide chain release factor-like protein [Bacteroides thetaiotaomicron VPI-5482] gi|29338761|gb|AAO76561.1| putative peptide chain release factor [Bacteroides thetaiotaomicron VPI-5482] Length = 206 Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 6/169 (3%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176 YL++ +G G E ++L R A+ K E +E G + SAT+ ++G Sbjct: 6 YLQITSGRGPAECCRVVALVLERIVRQAQASGLKMEMIEREVGPVNRTLLSATIALQGA- 64 Query: 177 AYGWLKGE-QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A G L E +G + + SPY +R F + + + + E +E D R +T RA Sbjct: 65 ASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVHSFVLSESQ---EATERDFRYETLRA 121 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SG GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL Sbjct: 122 SGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKL 170 >gi|71032615|ref|XP_765949.1| peptide chain release factor 1 [Theileria parva strain Muguga] gi|68352906|gb|EAN33666.1| peptide chain release factor 1, putative [Theileria parva] Length = 216 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 16/132 (12%) Query: 175 PNAYG----WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV----------VDDSIE 220 PN G +L+ E GVH++ R+ + + R H+S +++ V P +D +E Sbjct: 37 PNTEGLEDRFLR-EGGVHQVKRVPMTEKSGRMHSSTATVAVLPSEMAKGRGTNNFEDVLE 95 Query: 221 -IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +EI+ SD T RASG GGQ+VN ++AV + H PTG+ V+C +ERSQ KNK A Sbjct: 96 AVEINPSDIEWKTCRASGPGGQNVNKVETAVSLYHKPTGIKVECSEERSQGKNKELALKK 155 Query: 280 LRAKLYELELQK 291 LR ++ + +++ Sbjct: 156 LREEIARIRIEE 167 >gi|227325964|ref|ZP_03829988.1| peptide chain release factor-like protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 207 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 14/182 (7%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG--- 174 L++ A G E L+ TR A ++ + E +E G+ +G ++SA +L+ G Sbjct: 4 LQLSAAQGPDECMLATAKALQALTRDAARQGIECEVIETEAGKRSGTLRSALVLLNGEQA 63 Query: 175 -PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 P A W G + SP+ R W + E ++++ R + Sbjct: 64 EPLAASWC----GTLQWTCNSPWRKGGGRKN-----WFIGIARFHQEQAFADNEIRFEAT 114 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 ++SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK A ++ +L L+ Q+ Sbjct: 115 KSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHA 174 Query: 294 EI 295 E+ Sbjct: 175 EL 176 >gi|315254830|gb|EFU34798.1| PCRF domain protein [Escherichia coli MS 85-1] Length = 210 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/93 (43%), Positives = 54/93 (58%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 G YG LK E G HR+ R+ +S R HTS Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTS 199 >gi|323964709|gb|EGB60180.1| peptide chain release [Escherichia coli M863] Length = 200 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/93 (43%), Positives = 54/93 (58%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K I Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKI 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 G YG LK E G HR+ R+ +S R HTS Sbjct: 167 SGDGVYGRLKFESGGHRVQRVPATESQGRIHTS 199 >gi|319637886|ref|ZP_07992652.1| peptide chain release factor H [Neisseria mucosa C102] gi|317401041|gb|EFV81696.1| peptide chain release factor H [Neisseria mucosa C102] Length = 206 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 2/169 (1%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YL++ G E + +A +L A+ + E L ++ GI SATL ++G A Sbjct: 3 YLQISTAQGPAECRIFARFVLGKLLAEAQAKGIDAE-LVTETADKHGILSATLKLEGQKA 61 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + QG + + SP R + ++ P + + E+ SE+ T R+ G Sbjct: 62 ESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQTYEMP-SENGIEFQTCRSGG 120 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 GGQHVN T+SAVR TH +G+ V+ + ERSQH NK A +L KL E Sbjct: 121 KGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAE 169 >gi|149919721|ref|ZP_01908199.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1] gi|149819492|gb|EDM78922.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1] Length = 311 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 20/237 (8%) Query: 55 AISFIK--EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGE 111 A++F K E++ +L + LL DD + + +++ + +VE + E + L Sbjct: 49 AMAFAKLVELERQLGETRELL------DDPDMRELAQADVRELGGQVEDAETELTRLLTP 102 Query: 112 ADSNDA---YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 D NDA LE+ AG GG E+ + L RMY R++E+ ++ + +E + G K Sbjct: 103 KDPNDAKNVILEIRAGTGGDEAGLFVADLWRMYNRFSERHRWAIDQVEFSENSAGGFKEI 162 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 T ++G A+ LK E+GVHR+ R+ +S R HTS +++ + P S I + Sbjct: 163 TGRVQGKGAWAQLKFERGVHRVQRVPATESQGRIHTSTATVAIMPEPRTSTSTSIPRTSS 222 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPT--GVVVQCQQERSQHKNKAQAWNMLRAK 283 RA+ AG +T+ +R P G V+C Q RS +N A + LR++ Sbjct: 223 SRPCARAARAG----STSTPRLRGPPAPQAHGHRVRCDQ-RSPAQN-ASSHEALRSR 273 >gi|159900504|ref|YP_001546751.1| ATPase [Herpetosiphon aurantiacus ATCC 23779] gi|159893543|gb|ABX06623.1| ATPase AAA-2 domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 1027 Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 85/351 (24%), Positives = 151/351 (43%), Gaps = 28/351 (7%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +QLN + A +R + L + P W + +A+ L+ E ++ + ++ Sbjct: 693 LIKQLNVV-------EARERQTELMDEMSSPSFWDDHEQAQFLLTELSNVARRVGRCDDL 745 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LL+ E ++ + E +R++ ++ + + E L S D +DAY+ + Sbjct: 746 RRLYDDADQLLQRIRERNERRLFPELMRMAKRLERDLRFAELEMLFSNPEDWHDAYIILE 805 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + G W L Y W+ ++F+ + ++ E+ I+ TL I G A+G L+ Sbjct: 806 SDQAGLR---WVRNLANAYLEWSLGKRFEAKVIDETPAEDNLIR-VTLQISGSGAFGLLR 861 Query: 183 GEQGVHRLVRISPYDSNSRRHT-SFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240 E G HR IS R T + I V PV +D+ S+ + + RA G Sbjct: 862 SEAGTHR---ISETGGEPRLKTVTQVQITVLPVPTEDTPAPASSDIEMAVMNTRADGYFL 918 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 + + T A+ H +G +A +L L L +++ ++ + Sbjct: 919 RKLRVTGRAI---HRYSGAAAFA----CAGSERAVREMLLSILLGRLAMKQLDDFIQPSD 971 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + WG +RSY L +KD RT I T+P L G+LD F++A L Sbjct: 972 DA-----WGSVVRSYHLGKRSTIKDPRTEIVHTNPKAALAGELDLFIEAAL 1017 >gi|261379932|ref|ZP_05984505.1| putative peptide chain release factor H [Neisseria subflava NJ9703] gi|284797642|gb|EFC52989.1| putative peptide chain release factor H [Neisseria subflava NJ9703] Length = 212 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 2/169 (1%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YL++ G E + +A +L A+ + E L ++ GI SATL ++G A Sbjct: 9 YLQISTAQGPAECRIFARFVLGKLLAQAQAKGIDAE-LVTETADKHGILSATLKLEGQKA 67 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + QG + + SP R + ++ P + E+ SE+ T R+ G Sbjct: 68 ESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQMYEMP-SENGIEFQTCRSGG 126 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 GGQHVN T+SAVR TH +G+ V+ + ERSQH NK A +L KL E Sbjct: 127 KGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAE 175 >gi|253700800|ref|YP_003021989.1| class I peptide chain release factor [Geobacter sp. M21] gi|251775650|gb|ACT18231.1| Class I peptide chain release factor [Geobacter sp. M21] Length = 105 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 5/77 (6%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI + D +++ YRASG GGQH NTTDSAVRI H+PTGVV Q + RSQ +N+ +A Sbjct: 1 MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAME-- 58 Query: 281 RAKLYELELQKREEIAN 297 +L EL L++RE+ A Sbjct: 59 --RLAEL-LRRREQKAK 72 >gi|197118419|ref|YP_002138846.1| hydrolase [Geobacter bemidjiensis Bem] gi|197087779|gb|ACH39050.1| hydrolase, putative [Geobacter bemidjiensis Bem] Length = 105 Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 5/76 (6%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI + D +++ YRASG GGQH NTTDSAVRI H+PTGVV Q + RSQ +N+ +A Sbjct: 1 MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAME-- 58 Query: 281 RAKLYELELQKREEIA 296 +L EL L++RE+ A Sbjct: 59 --RLAEL-LRRREQKA 71 >gi|326201214|ref|ZP_08191086.1| peptide chain release factor H [Clostridium papyrosolvens DSM 2782] gi|325988782|gb|EGD49606.1| peptide chain release factor H [Clostridium papyrosolvens DSM 2782] Length = 205 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 4/171 (2%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 ++++ +G G E + ++ L+ + K + K ++ GE +G + LL + Sbjct: 2 WIQISSGKGPVECELAVSLFLKAFENECNKNQIKINIIDAVPGEISGNYKSVLLSLDCSE 61 Query: 178 YGWLKG-EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + + + G + SPY N +R F ++ V+ + D ++ E D R ++ R+S Sbjct: 62 HQVIDNIKSGTVLWICKSPYRPNHKRKNWFINVDVFQIPD---KLSFCEKDVRFESMRSS 118 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 G GGQ+VN ++AVR H+PTG+ ++ERSQ+ NK A L + E+ Sbjct: 119 GPGGQNVNKVETAVRAIHLPTGLTATAREERSQYMNKKLALCRLSNLIREM 169 >gi|189426554|ref|YP_001953731.1| class I peptide chain release factor [Geobacter lovleyi SZ] gi|189422813|gb|ACD97211.1| Class I peptide chain release factor [Geobacter lovleyi SZ] Length = 107 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 5/89 (5%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + IEI+E+D R++ YRASG GGQH NTTDSAVRI H+PTG+VV + RSQ +N+ A Sbjct: 1 MSIEINETDIRVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVHAAENRSQLRNREVAME 60 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG 307 LR L L+KR + ++K G Sbjct: 61 RLR-----LALEKRNRVEKKRMATKVPKG 84 >gi|300775389|ref|ZP_07085251.1| probable peptide chain release factor H [Chryseobacterium gleum ATCC 35910] gi|300506129|gb|EFK37265.1| probable peptide chain release factor H [Chryseobacterium gleum ATCC 35910] Length = 232 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 4/198 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNA 177 +++ +G G E Q A +L+ + A++ E + +G+E +KS T+L+KG Sbjct: 5 IQITSGRGPLECQWVAAKVLKTFLEEAKQNTIDYEIIHRENGDENLTLKSVTILLKGKEI 64 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 +LK G S + +R F I+ +++ I+ +E D R T R+ G Sbjct: 65 NLFLKNWLGTVCWTGKSTFRKLHKRSNWFIGIFE---LENVKMIDFNEKDIRFQTARSQG 121 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 +GGQ+VN ++AVR THIPT V Q RSQ +NK ++ L+ K+ + +Q+ E Sbjct: 122 SGGQNVNKVNTAVRATHIPTNETVFVQDSRSQLENKKRSVIRLKEKVMAVYIQQLERKMK 181 Query: 298 IGESSKTEIGWGRQIRSY 315 S + ++ G +R++ Sbjct: 182 DTWSLQMQVERGNPVRTF 199 >gi|17548920|ref|NP_522260.1| peptide chain release factor-like protein [Ralstonia solanacearum GMI1000] gi|17431170|emb|CAD17850.1| putative peptide chain release factor homolog protein [Ralstonia solanacearum GMI1000] Length = 207 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 6/135 (4%) Query: 151 KTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E LE DGE G ++SA + ++G + +G + SPY R Sbjct: 36 RVEVLEQEDGEHPGTLRSALVSLEGDAEAAVAQRWEGTIQWTCPSPYRPRHARKN----- 90 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 W + V + S+ R +T RASG GGQHVN T+SAVR H+ TG+ V+ Q ERSQ Sbjct: 91 WFFGVARCAAPAATLPSEIRFETARASGPGGQHVNKTESAVRAIHLATGISVKVQTERSQ 150 Query: 270 HKNKAQAWNMLRAKL 284 H NK A +L KL Sbjct: 151 HANKRLAVLLLAHKL 165 >gi|70936414|ref|XP_739155.1| peptide release factor [Plasmodium chabaudi chabaudi] gi|56515938|emb|CAH84701.1| peptide release factor, putative [Plasmodium chabaudi chabaudi] Length = 210 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 20/189 (10%) Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY--PVVDDSIE--IEISESD 227 IKG Y E G+HR+ RI P +S + TS S + ++ + +E ++I ++D Sbjct: 8 IKGEGVYVDFIQEIGIHRVQRI-PINS-KKMQTSTSIVLLFDEKQTKEKLEKKMKIPKND 65 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 I+T R+ GAGGQ VN ++ V+ITH PT + V+ Q+ SQ +NK+ A +M++ KLY Sbjct: 66 FIIETKRSGGAGGQSVNKNETCVKITHKPTNIFVEVQKTSSQIQNKSIAMDMIKNKLYNF 125 Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 + +E N + K + G +IR+Y + V D N++ T +D Sbjct: 126 YYE--QEKMNFLKDKKNQKQNGDRSEKIRTYNF-SHNTVIDHIANVQYTG--------ID 174 Query: 345 DFMKATLAI 353 F K T I Sbjct: 175 QFFKGTQLI 183 >gi|300770278|ref|ZP_07080157.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum ATCC 33861] gi|300762754|gb|EFK59571.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum ATCC 33861] Length = 232 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 20/210 (9%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG 174 D + V AG G E +++ + A + + L+ +G G + SA+L I G Sbjct: 2 DKIIGVTAGRGPEECSWVVAQVIKKIIQEAPTFDVEVQVLDRQEGSINGTVISASLKISG 61 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF--------SSIWVYPVVDDSIEIEISES 226 N + G + + S + + +R F S+ W++ V Sbjct: 62 ENCMAFSALWTGTIQWIGKSDFRKSHKRKNWFIEVFEIKPSASWIFDV-----------K 110 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R R+SGAGGQHVN SAVR TH+PTGV V RSQH+NK A L+ K+ E Sbjct: 111 DIRYQAMRSSGAGGQHVNKVSSAVRATHMPTGVSVVAMDSRSQHQNKKIATERLQTKVNE 170 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYV 316 L L +E ++ ++ G IR++V Sbjct: 171 LNLLHWKENEKYKWFNQIQVERGNAIRTFV 200 >gi|71027353|ref|XP_763320.1| peptide chain release factor 1 [Theileria parva strain Muguga] gi|68350273|gb|EAN31037.1| peptide chain release factor 1, putative [Theileria parva] Length = 299 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 80/163 (49%), Gaps = 30/163 (18%) Query: 106 SLLSGEADSNDAY---LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK-----TEALEI 157 SL SG + + + L+V G GG ES +A L MY K LEI Sbjct: 115 SLFSGSLHTLNYHKILLQVLQGVGGEESGKFAAELYDMYANICNLNNLKHIKHPNNTLEI 174 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR-HTSFSSIWVYPVVD 216 G + + E GVHR+ R+ P+ NSRR TS + + V P + Sbjct: 175 FQGLDR-----------------FRYEFGVHRVQRV-PF--NSRRIQTSSAVVTVVPHFN 214 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 +I I SD ++T R+SG+GGQ VN +++AVRITHIPTG+ Sbjct: 215 VE-DINIKSSDLMVETMRSSGSGGQSVNKSETAVRITHIPTGI 256 >gi|156305180|ref|XP_001617535.1| hypothetical protein NEMVEDRAFT_v1g157388 [Nematostella vectensis] gi|156194391|gb|EDO25435.1| predicted protein [Nematostella vectensis] Length = 80 Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 1/72 (1%) Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 LRAKLYE+E+ KR A E SK +IGWG QIRSYVL Q +KDLRT ++ ++ VL Sbjct: 6 LRAKLYEMEMMKRNAAAQELEDSKADIGWGSQIRSYVLDD-QRIKDLRTGVQTSNCDRVL 64 Query: 340 DGDLDDFMKATL 351 DG+LD F++A+L Sbjct: 65 DGELDMFIEASL 76 >gi|301344980|ref|ZP_07225721.1| peptide chain release factor 1 [Acinetobacter baumannii AB056] gi|301513510|ref|ZP_07238747.1| peptide chain release factor 1 [Acinetobacter baumannii AB058] gi|301597421|ref|ZP_07242429.1| peptide chain release factor 1 [Acinetobacter baumannii AB059] Length = 127 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 6/109 (5%) Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + + + E Sbjct: 1 HINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATS--EM 58 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 + +G G +IR+Y P + D R N+ +++GDL + + Sbjct: 59 RRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELL 106 >gi|225076746|ref|ZP_03719945.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens NRL30031/H210] gi|224951914|gb|EEG33123.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens NRL30031/H210] Length = 212 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 2/169 (1%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YL++ G E + +A +L A+ + E L ++ GI SATL ++G Sbjct: 9 YLQISTAQGPAECRIFARFVLGKLLAEAQVKGIDAE-LVTETADKHGILSATLKLEGQKT 67 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + QG + + SP R + ++ P + E+ SE+ T R+ G Sbjct: 68 ESLAQTWQGTLQWICPSPIRPKHPRKNWYIGVFRLPDMPQRYEMP-SENGIEFQTCRSGG 126 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 GGQHVN T+SAVR TH +G+ V+ + ERSQH NK A +L KL E Sbjct: 127 KGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAE 175 >gi|10092253|gb|AAG12666.1|AC027033_1 peptide chain release factor, putative; 62597-62246 [Arabidopsis thaliana] Length = 88 Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/80 (48%), Positives = 52/80 (65%) Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NKA A +L++ L +LE+ ++ + S TEI WG QIR+YVL Y+MVKDLRTN E Sbjct: 2 NKASAMAVLQSWLDQLEMARQTSVNAQHTRSLTEISWGNQIRTYVLHQYRMVKDLRTNYE 61 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + P VL+GDLD F+ L Sbjct: 62 VSDPDSVLEGDLDGFISKLL 81 >gi|282890772|ref|ZP_06299292.1| hypothetical protein pah_c026o105 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499365|gb|EFB41664.1| hypothetical protein pah_c026o105 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 118 Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 6/89 (6%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 + I++ P+ DD ++ +C + +RA G+GGQHVN TDSAVR+TH PTG+V+ CQ Sbjct: 2 AKIFLPPLDDDLLK------ECTMTAFRARGSGGQHVNVTDSAVRLTHNPTGIVITCQVH 55 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEI 295 RSQH NK + LR ++ +K + + Sbjct: 56 RSQHLNKKECLVKLREEVERRNYRKPKRV 84 >gi|207724424|ref|YP_002254821.1| peptide chain release factor homolog protein [Ralstonia solanacearum MolK2] gi|206589645|emb|CAQ36606.1| peptide chain release factor homolog protein [Ralstonia solanacearum MolK2] Length = 207 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 6/171 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177 L+ + G E + L R + + + E +E DGE AG ++SA + ++G Sbjct: 4 LQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGEHAGTLRSALVSLEGDAE 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + +G + SPY R W + V + S+ R +T RASG Sbjct: 64 ADIAQRWEGTIQWTCPSPYRPRHARKN-----WFFGVARCAAPAVTLPSEIRFETTRASG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 GGQHVN T+SAVR H+ TG+ V+ Q ERSQH NK A +L +L E Sbjct: 119 PGGQHVNKTESAVRAVHVATGISVKVQTERSQHANKRLAVLLLAHRLASHE 169 >gi|255067533|ref|ZP_05319388.1| putative peptide chain release factor H [Neisseria sicca ATCC 29256] gi|255048154|gb|EET43618.1| putative peptide chain release factor H [Neisseria sicca ATCC 29256] Length = 219 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 5/211 (2%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YL++ G E + +A +L A+ + E + ++ G+ SA L + G +A Sbjct: 14 YLQISTAQGPAECRIFARFVLGRLLAEAKAESVEAEIIS-ETADKHGMMSAVLKLDGKHA 72 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + QG + + SP R + ++ P + D SES+ + R+ G Sbjct: 73 ETLAQRWQGSLQWICASPVRPKHPRKNWYIGVFRMPDMPDMP----SESEIEFQSCRSGG 128 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN T+SAVR TH +G+ V+ + ERSQH NK A +L KL E + + A Sbjct: 129 KGGQHVNKTESAVRATHKASGISVRVESERSQHANKKLALTLLTQKLAEHHAGQTDNYAR 188 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 S ++ G R++ ++ D ++ Sbjct: 189 AQHSRLYQVERGNPKRTFAGTEFKEKPDAKS 219 >gi|300693607|ref|YP_003749580.1| peptide chain release factor homolog protein [Ralstonia solanacearum PSI07] gi|299075644|emb|CBJ34941.1| putative peptide chain release factor homolog protein [Ralstonia solanacearum PSI07] Length = 207 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 69/135 (51%), Gaps = 6/135 (4%) Query: 151 KTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E +E DGE G ++SA + ++G + +G + SPY R Sbjct: 36 RVEVIEQEDGERPGTLRSALVSLEGDAEAAAAQRWEGTIQWTSPSPYRPRHARKN----- 90 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 W + V + S+ R +T R+SG GGQHVN T+SAVR H+ TG+ V+ Q ERSQ Sbjct: 91 WFFGVARCATPAVTLPSEIRFETTRSSGPGGQHVNKTESAVRAIHMATGISVKVQTERSQ 150 Query: 270 HKNKAQAWNMLRAKL 284 H NK A +L KL Sbjct: 151 HANKRLAVLLLAHKL 165 >gi|69249982|ref|ZP_00605073.1| PCRF [Enterococcus faecium DO] gi|68194043|gb|EAN08594.1| PCRF [Enterococcus faecium DO] Length = 139 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 52/79 (65%) Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE D ++ +E + + +++ + LL G D N+A +E+H GAGGTESQDW +ML Sbjct: 49 EEPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSML 108 Query: 138 LRMYTRWAEKRKFKTEALE 156 LRMYTRWAE+ ++ E L+ Sbjct: 109 LRMYTRWAEQHGYQVETLD 127 >gi|332885245|gb|EGK05496.1| peptide chain release factor H [Dysgonomonas mossii DSM 22836] Length = 206 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 10/175 (5%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLI 172 +N YL++ +G G E ++L + A + K + E LE GE + SA + + Sbjct: 2 NNKIYLQITSGRGPAECCRAVALVLEKILKQARELKLEAEVLEREQGEINRTLFSAIISL 61 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + +GV + SPY +R F V E+S+ D + T Sbjct: 62 EGNKIDEIVNEWEGVIQWTAQSPYRIYHKRKNWFVG------VKSFTPSELSDVDMKYIT 115 Query: 233 Y---RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 Y R+SGAGGQHVN T++AVR H P+G+ V +RSQH+NK A L KL Sbjct: 116 YQTLRSSGAGGQHVNKTETAVRAIHNPSGLSVIASDQRSQHQNKKLATERLLVKL 170 >gi|302791615|ref|XP_002977574.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii] gi|300154944|gb|EFJ21578.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii] Length = 207 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 4/65 (6%) Query: 221 IEISESD----CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +SE D C++DT+RA+G GGQH N T+SAVR+ H+PTG+V Q ++RSQH+N+ A Sbjct: 38 LRMSERDLVAQCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRSQHRNRDSA 97 Query: 277 WNMLR 281 LR Sbjct: 98 VQRLR 102 >gi|167553099|ref|ZP_02346849.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322360|gb|EDZ10199.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 204 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 9/181 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 L++ + G E L T+ A + K LE G ++SA + + G A Sbjct: 4 LQLSSAQGPDECCLAVKKTLDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + G + SPY + R W + S + I + R +T R+SG Sbjct: 64 MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ + LE Q++ E A Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175 Query: 298 I 298 + Sbjct: 176 L 176 >gi|290475750|ref|YP_003468639.1| putative peptide chain release factor [Xenorhabdus bovienii SS-2004] gi|289175072|emb|CBJ81875.1| putative peptide chain release factor (modular protein) [Xenorhabdus bovienii SS-2004] Length = 205 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 5/120 (4%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++S + I+G N + + G + + SP+ R F + + + +I Sbjct: 51 LRSVMVAIQGENEQQFFERWDGTIKWICASPWRKGDGRKNWFIGVAQFKPLQ-----QIM 105 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ES+ R +T RASG GGQHVN T+SA+R HI +G+ V+ Q ERSQH N+ A +L +L Sbjct: 106 ESEIRFETLRASGPGGQHVNKTESAIRAVHIASGISVKVQSERSQHANRRLACLLLEHRL 165 >gi|294949753|ref|XP_002786323.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC 50983] gi|239900543|gb|EER18119.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC 50983] Length = 423 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 39/274 (14%) Query: 77 LEEDDCSILQ----ETSDNLQRIKLEVEYKQFESL---LSGEA-----------DSNDAY 118 LE +D S+ E L++I +E+E + F+ L +S E D++D Sbjct: 98 LERNDISMKSMFNAEVDSQLEKI-IEIENRLFDHLHTRMSNEGIDCATWHAYVKDASDCT 156 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKS--ATLLIKG- 174 +E+ G GG E+ W + M R+A + +++ + G ++G + A +K Sbjct: 157 VEIRPGVGGVEAGKWCKDIFDMLERFAGIMGWAAPEVKVMEQGWQSGYRQIIADFFLKPG 216 Query: 175 ------PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI--EISES 226 +G+LK E G+HR+ R+ + ++S TS S+ V P D + + + Sbjct: 217 VKRTPEKGIFGYLKFEAGIHRVQRVPSWPADSLPQTSACSVVVLPREDPNSNLIPVLKPH 276 Query: 227 DCRI-DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 + ++ T ++SG GGQ VN AVRI HI +GV R+ NKA A + K+ Sbjct: 277 EYKVWITKKSSGPGGQCVNAAHQAVRIRHIESGVEGFADCYRALKSNKALALQQVSQKIM 336 Query: 286 ELELQKREEIAN-IGESSKTEIGWG---RQIRSY 315 E +K ++IA G K +G G +IRSY Sbjct: 337 E---EKGKKIAKERGIIRKQHMGSGDRSEKIRSY 367 >gi|16759310|ref|NP_454927.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763697|ref|NP_459312.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142917|ref|NP_806259.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62178886|ref|YP_215303.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615515|ref|YP_001589480.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167993332|ref|ZP_02574427.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232270|ref|ZP_02657328.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168465389|ref|ZP_02699271.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819094|ref|ZP_02831094.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443695|ref|YP_002039557.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194472201|ref|ZP_03078185.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|198241865|ref|YP_002214270.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389746|ref|ZP_03216357.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207855800|ref|YP_002242451.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213025683|ref|ZP_03340130.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213161389|ref|ZP_03347099.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213416713|ref|ZP_03349857.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425142|ref|ZP_03357892.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649630|ref|ZP_03379683.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852433|ref|ZP_03381965.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224582156|ref|YP_002635954.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|289826861|ref|ZP_06545771.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513287|pir||AI0542 probable peptide chain release factor prfH [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418816|gb|AAL19271.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501601|emb|CAD08785.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Typhi] gi|29138549|gb|AAO70119.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62126519|gb|AAX64222.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364879|gb|ABX68647.1| hypothetical protein SPAB_03287 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402358|gb|ACF62580.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194458565|gb|EDX47404.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195631774|gb|EDX50294.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197936381|gb|ACH73714.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602191|gb|EDZ00737.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205328589|gb|EDZ15353.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333479|gb|EDZ20243.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205344152|gb|EDZ30916.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206707603|emb|CAR31885.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224466683|gb|ACN44513.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245540|emb|CBG23335.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992008|gb|ACY86893.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156930|emb|CBW16412.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911285|dbj|BAJ35259.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084570|emb|CBY94362.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224975|gb|EFX50036.1| Peptide chain release protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322713338|gb|EFZ04909.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128632|gb|ADX16062.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622014|gb|EGE28359.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987265|gb|AEF06248.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 204 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 9/181 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 L++ + G E L T+ A + K LE G ++SA + + G A Sbjct: 4 LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + G + SPY + R W + S + I + R +T R+SG Sbjct: 64 MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ + LE Q++ E A Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175 Query: 298 I 298 + Sbjct: 176 L 176 >gi|238913295|ref|ZP_04657132.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 204 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 9/181 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 L++ + G E L T+ A + K LE G ++SA + + G A Sbjct: 4 LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + G + SPY + R W + S + I + R +T R+SG Sbjct: 64 MAFSERWCGTLLWICTSPYRPHHGRKN-----WYIGIGRFSADEHIQSDEIRFETLRSSG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ + LE Q++ E A Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175 Query: 298 I 298 + Sbjct: 176 L 176 >gi|300697304|ref|YP_003747965.1| peptide chain release factor homolog protein [Ralstonia solanacearum CFBP2957] gi|299074028|emb|CBJ53565.1| putative peptide chain release factor homolog protein [Ralstonia solanacearum CFBP2957] Length = 210 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 6/171 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177 L+ + G E + L R + + + E +E DGE AG ++SA + ++G Sbjct: 7 LQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGECAGTLRSALVSLEGDAE 66 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + +G + SPY R W + V + S+ R +T RASG Sbjct: 67 ADVAQRWEGTIQWTCPSPYRPRHARKN-----WFFGVARCAAPAVTLPSEIRFETTRASG 121 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 GGQHVN T+SAVR H+ TG+ V+ Q ERSQH NK A +L +L E Sbjct: 122 PGGQHVNKTESAVRAIHVATGISVKVQTERSQHANKRLAVLLLAHRLANHE 172 >gi|197248567|ref|YP_002145297.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204927397|ref|ZP_03218599.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|197212270|gb|ACH49667.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204324062|gb|EDZ09257.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 204 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 9/181 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 L++ + G E L T+ A + K LE G ++SA + + G A Sbjct: 4 LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + G + SPY + R W + S + ++ + R +T R+SG Sbjct: 64 MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEQMQSDEIRFETLRSSG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ + LE Q++ E A Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175 Query: 298 I 298 + Sbjct: 176 L 176 >gi|15799941|ref|NP_285953.1| peptide chain release factor-like protein [Escherichia coli O157:H7 EDL933] gi|15829517|ref|NP_308290.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. Sakai] gi|82775830|ref|YP_402177.1| peptide chain release factor-like protein [Shigella dysenteriae Sd197] gi|168750219|ref|ZP_02775241.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4113] gi|168757264|ref|ZP_02782271.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4401] gi|168763477|ref|ZP_02788484.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4501] gi|168770034|ref|ZP_02795041.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4486] gi|168776124|ref|ZP_02801131.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4196] gi|168782997|ref|ZP_02808004.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4076] gi|168789709|ref|ZP_02814716.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC869] gi|168800326|ref|ZP_02825333.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC508] gi|195938639|ref|ZP_03084021.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. EC4024] gi|208806453|ref|ZP_03248790.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4206] gi|208812358|ref|ZP_03253687.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4045] gi|208821267|ref|ZP_03261587.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4042] gi|209398288|ref|YP_002268863.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4115] gi|217325768|ref|ZP_03441852.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. TW14588] gi|254791396|ref|YP_003076233.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. TW14359] gi|261223709|ref|ZP_05937990.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255882|ref|ZP_05948415.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. FRIK966] gi|291281080|ref|YP_003497898.1| putative peptide chain release factor [Escherichia coli O55:H7 str. CB9615] gi|309786024|ref|ZP_07680653.1| putative peptide chain release factor H [Shigella dysenteriae 1617] gi|12513007|gb|AAG54561.1|AE005201_14 probable peptide chain release factor [Escherichia coli O157:H7 str. EDL933] gi|13359720|dbj|BAB33686.1| probable peptide chain release factor [Escherichia coli O157:H7 str. Sakai] gi|81239978|gb|ABB60688.1| probable peptide chain release factor [Shigella dysenteriae Sd197] gi|187768441|gb|EDU32285.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4196] gi|188015585|gb|EDU53707.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4113] gi|188999642|gb|EDU68628.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4076] gi|189355734|gb|EDU74153.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4401] gi|189361064|gb|EDU79483.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4486] gi|189366361|gb|EDU84777.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4501] gi|189370775|gb|EDU89191.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC869] gi|189377360|gb|EDU95776.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC508] gi|208726254|gb|EDZ75855.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4206] gi|208733635|gb|EDZ82322.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4045] gi|208741390|gb|EDZ89072.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4042] gi|209159688|gb|ACI37121.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4115] gi|209745314|gb|ACI70964.1| probable peptide chain release factor [Escherichia coli] gi|209745316|gb|ACI70965.1| probable peptide chain release factor [Escherichia coli] gi|209745318|gb|ACI70966.1| probable peptide chain release factor [Escherichia coli] gi|209745320|gb|ACI70967.1| probable peptide chain release factor [Escherichia coli] gi|209745322|gb|ACI70968.1| probable peptide chain release factor [Escherichia coli] gi|217321989|gb|EEC30413.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. TW14588] gi|254590796|gb|ACT70157.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. TW14359] gi|290760953|gb|ADD54914.1| Probable peptide chain release factor [Escherichia coli O55:H7 str. CB9615] gi|308926135|gb|EFP71613.1| putative peptide chain release factor H [Shigella dysenteriae 1617] gi|320190210|gb|EFW64860.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. EC1212] gi|320638171|gb|EFX07920.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. G5101] gi|320643253|gb|EFX12452.1| peptide chain release factor-like protein [Escherichia coli O157:H- str. 493-89] gi|320648900|gb|EFX17518.1| peptide chain release factor-like protein [Escherichia coli O157:H- str. H 2687] gi|320660248|gb|EFX27758.1| peptide chain release factor-like protein [Escherichia coli O55:H7 str. USDA 5905] gi|320665014|gb|EFX32124.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. LSU-61] gi|326338757|gb|EGD62576.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. 1044] gi|326342456|gb|EGD66236.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. 1125] Length = 166 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 75/133 (56%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + +SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R SG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRPSGPGGQHVNKTDSAVRATHLATGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 125 -WKLEQQQQENSA 136 >gi|302786792|ref|XP_002975167.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii] gi|300157326|gb|EFJ23952.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii] Length = 411 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 4/65 (6%) Query: 221 IEISESD----CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +SE D C++DT+RA+G GGQH N T+SAVR+ H+PTG+V Q ++RSQH+N+ A Sbjct: 38 LRMSERDLVAQCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRSQHRNRESA 97 Query: 277 WNMLR 281 LR Sbjct: 98 VQRLR 102 >gi|168240054|ref|ZP_02664986.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449085|ref|YP_002044299.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197263075|ref|ZP_03163149.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|194407389|gb|ACF67608.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197241330|gb|EDY23950.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205339954|gb|EDZ26718.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 204 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 9/181 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 L++ + G E L T+ A + K LE G ++SA + + G A Sbjct: 4 LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + G + SPY + R W + S + I + R +T R+SG Sbjct: 64 MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ + LE Q++ E A Sbjct: 119 PGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175 Query: 298 I 298 + Sbjct: 176 L 176 >gi|294894730|ref|XP_002774927.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC 50983] gi|239880702|gb|EER06743.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC 50983] Length = 272 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 17/210 (8%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D++D +E+ G GG E+ W + M R+A + +++ E G+K Sbjct: 17 DASDCTVEIRPGVGGVEAGKWCKDIFDMLERFAGIMGWAAPEVKVM---EQGVKRTPE-- 71 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI--EISESDCRI 230 KG +G+LK E G+HR+ R+ + ++S TS S+ V P D + + + + ++ Sbjct: 72 KG--IFGYLKFEAGIHRVQRVPSWPADSLPQTSACSVVVLPREDPNSNLIPVLKPHEYKV 129 Query: 231 -DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 T ++SG GGQ VN AVRI HI +GV R+ NKA A + K+ E Sbjct: 130 WITKKSSGPGGQCVNAAHQAVRIRHIESGVEGFADCYRALKSNKALALQQVSQKIME--- 186 Query: 290 QKREEIAN-IGESSKTEIGWG---RQIRSY 315 +K ++IA G K +G G +IRSY Sbjct: 187 EKGKKIAKERGIIRKQHMGSGDRSEKIRSY 216 >gi|213610056|ref|ZP_03369882.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 204 Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 79/162 (48%), Gaps = 9/162 (5%) Query: 138 LRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L T+ A + K LE G ++SA + + G A + + G + SPY Sbjct: 23 LDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKAMAFSERWCGTLLWICTSPY 82 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 + R W + S + I + R +T R+SG GGQHVN TDSAVR TH+ Sbjct: 83 RPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLA 137 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 +G+ V+ Q ERSQH NK A ++ + LE Q++ E A + Sbjct: 138 SGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAAL 176 >gi|78222830|ref|YP_384577.1| class I peptide chain release factor [Geobacter metallireducens GS-15] gi|78194085|gb|ABB31852.1| Class I peptide chain release factor [Geobacter metallireducens GS-15] Length = 107 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/61 (55%), Positives = 43/61 (70%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 IEI+E+D + + YR SG GGQH N T+S VRI H+PTGVVVQ + RSQ +N+ A L Sbjct: 2 IEINEADLKFEFYRGSGPGGQHRNVTESGVRIRHVPTGVVVQACESRSQARNREIALERL 61 Query: 281 R 281 R Sbjct: 62 R 62 >gi|224127830|ref|XP_002329188.1| predicted protein [Populus trichocarpa] gi|222870969|gb|EEF08100.1| predicted protein [Populus trichocarpa] Length = 257 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/57 (54%), Positives = 42/57 (73%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 C +DT++ASG GGQH N +SAVR+ H+PTG++ Q ++RSQH N+A A LRA L Sbjct: 102 CEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHMNRASALKRLRALL 158 >gi|119513510|ref|ZP_01632531.1| peptide chain release factor 2 [Nodularia spumigena CCY9414] gi|119461826|gb|EAW42842.1| peptide chain release factor 2 [Nodularia spumigena CCY9414] Length = 66 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/48 (66%), Positives = 38/48 (79%) Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E WG QIR+YV PYQMVKDLRTN+E T+ SDV+DGDLD F++A L Sbjct: 7 VEASWGNQIRNYVFHPYQMVKDLRTNVETTAISDVMDGDLDSFIQAYL 54 >gi|168261270|ref|ZP_02683243.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349709|gb|EDZ36340.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 204 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 9/179 (5%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 L++ + G E L T+ A + K LE G ++SA + + G A Sbjct: 4 LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + G + SPY + R W + S + I + R +T R+SG Sbjct: 64 MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ + LE Q++ E A Sbjct: 119 PGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECA 174 >gi|213855686|ref|ZP_03383926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 78 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 1/72 (1%) Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++AKLYELE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VL Sbjct: 4 MKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVL 62 Query: 340 DGDLDDFMKATL 351 DG LD F++A+L Sbjct: 63 DGSLDQFIEASL 74 >gi|170728229|ref|YP_001762255.1| peptide chain release factor H [Shewanella woodyi ATCC 51908] gi|169813576|gb|ACA88160.1| peptide chain release factor H [Shewanella woodyi ATCC 51908] Length = 218 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 20/149 (13%) Query: 185 QGVHRLVRISPYD-----SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 QG + SP+ ++R F S +Y + ++ E+S CR ASGAG Sbjct: 79 QGAMLWICQSPFQLEKNRVKNKRKNWFFSGQMYEFNETELDKEVSFQTCR-----ASGAG 133 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANI 298 GQHVNTTDSAVR H+ TG+ V+ + ERSQH NK + RA L++ LE K E+++ + Sbjct: 134 GQHVNTTDSAVRAIHVATGISVRVESERSQHANK----RLARALLFQKLESTKVEQMS-L 188 Query: 299 GESSKTEIGW----GRQIRSYVLQPYQMV 323 E ++ + W G ++++ + + +V Sbjct: 189 QEKARWQQHWEVERGNPVKTFKGEKFTLV 217 >gi|296392334|ref|ZP_06881809.1| peptide chain release factor-like protein [Pseudomonas aeruginosa PAb1] Length = 204 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY + R F + S+E EI R +T R+SG GGQHVNTTDSAVR T Sbjct: 80 SPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 134 Query: 254 HIPTGVVVQCQQERSQHKNK 273 H+ +G+ V+ Q +RSQH NK Sbjct: 135 HLASGISVRVQSQRSQHANK 154 >gi|56414557|ref|YP_151632.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363487|ref|YP_002143124.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128814|gb|AAV78320.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094964|emb|CAR60501.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 204 Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 9/181 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 L++ + G E L T+ A + K LE G ++SA + + G A Sbjct: 4 LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + G + SPY + R W + S + I + R +T R+SG Sbjct: 64 MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN +DSAVR TH+ +G+ V+ Q ERSQH NK A ++ + LE Q++ E A Sbjct: 119 PGGQHVNKSDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175 Query: 298 I 298 + Sbjct: 176 L 176 >gi|107104573|ref|ZP_01368491.1| hypothetical protein PaerPA_01005652 [Pseudomonas aeruginosa PACS2] Length = 207 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY + R F + S+E EI R +T R+SG GGQHVNTTDSAVR T Sbjct: 83 SPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 137 Query: 254 HIPTGVVVQCQQERSQHKNK 273 H+ +G+ V+ Q +RSQH NK Sbjct: 138 HLASGISVRVQSQRSQHANK 157 >gi|15600663|ref|NP_254157.1| peptide chain release factor-like protein [Pseudomonas aeruginosa PAO1] gi|254237846|ref|ZP_04931169.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719] gi|254243022|ref|ZP_04936344.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192] gi|9951802|gb|AAG08855.1|AE004959_11 probable peptide chain release factor [Pseudomonas aeruginosa PAO1] gi|126169777|gb|EAZ55288.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719] gi|126196400|gb|EAZ60463.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192] Length = 204 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY + R F + S+E EI R +T R+SG GGQHVNTTDSAVR T Sbjct: 80 SPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 134 Query: 254 HIPTGVVVQCQQERSQHKNK 273 H+ +G+ V+ Q +RSQH NK Sbjct: 135 HLASGISVRVQSQRSQHANK 154 >gi|116053620|ref|YP_793947.1| peptide chain release factor-like protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115588841|gb|ABJ14856.1| putative peptide chain release factor [Pseudomonas aeruginosa UCBPP-PA14] Length = 204 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY + R F + S+E EI R +T R+SG GGQHVNTTDSAVR T Sbjct: 80 SPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 134 Query: 254 HIPTGVVVQCQQERSQHKNK 273 H+ +G+ V+ Q +RSQH NK Sbjct: 135 HLASGISVRVQSQRSQHANK 154 >gi|242059479|ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor] gi|241930860|gb|EES04005.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor] Length = 259 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 29/54 (53%), Positives = 41/54 (75%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 C + T++ASG GGQH N +SAVR+ H+PTG++ Q ++RSQHKN+A A + LR Sbjct: 99 CDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRASALSRLR 152 >gi|46446182|ref|YP_007547.1| putative peptide chain release factor 2 [Candidatus Protochlamydia amoebophila UWE25] gi|46399823|emb|CAF23272.1| putative peptide chain release factor 2 [Candidatus Protochlamydia amoebophila UWE25] Length = 118 Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 50/70 (71%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 ++C++ T+R+SG+GGQH+N T+SAVR+TH PTG+VV Q RSQ++NK LR + Sbjct: 17 AECQVQTFRSSGSGGQHINVTNSAVRLTHFPTGIVVSSQTFRSQYRNKQNCLAKLRQTVE 76 Query: 286 ELELQKREEI 295 +L ++ + I Sbjct: 77 KLNYRQPKRI 86 >gi|218894572|ref|YP_002443442.1| peptide chain release factor-like protein [Pseudomonas aeruginosa LESB58] gi|218774801|emb|CAW30619.1| probable peptide chain release factor [Pseudomonas aeruginosa LESB58] Length = 204 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 5/80 (6%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY + R F + S+E EI R +T R+SG GGQHVNTTDSAVR T Sbjct: 80 SPYRARHARKNWFIGAERFAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 134 Query: 254 HIPTGVVVQCQQERSQHKNK 273 H+ +G+ V+ Q +RSQH NK Sbjct: 135 HLASGISVRVQSQRSQHANK 154 >gi|225023353|ref|ZP_03712545.1| hypothetical protein EIKCOROL_00211 [Eikenella corrodens ATCC 23834] gi|224943831|gb|EEG25040.1| hypothetical protein EIKCOROL_00211 [Eikenella corrodens ATCC 23834] Length = 204 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 74/156 (47%), Gaps = 5/156 (3%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YL++ G E Q +A L+ R AE + E LE + GI SA L + G A Sbjct: 3 YLQISTAQGPAECQMFARFALQKILREAEAAGVEAEILE-QTPSKHGILSAVLKLSGSRA 61 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 G QG + V SP R + ++ P + E E E T RA G Sbjct: 62 ESLATGWQGTLQWVCPSPLRPQHPRKNWYIGVFRLPEIPALPESEGIE----FQTCRAGG 117 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 GGQHVN T+SAVR H+ +G+ V+ + ERSQH NK Sbjct: 118 KGGQHVNKTESAVRAVHLASGIAVRAEGERSQHANK 153 >gi|322614608|gb|EFY11537.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620127|gb|EFY16999.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623421|gb|EFY20260.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629281|gb|EFY26060.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632001|gb|EFY28755.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637261|gb|EFY33963.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642458|gb|EFY39060.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646289|gb|EFY42803.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652443|gb|EFY48797.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653395|gb|EFY49728.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660457|gb|EFY56693.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664609|gb|EFY60802.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669338|gb|EFY65488.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670884|gb|EFY67017.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678877|gb|EFY74932.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681906|gb|EFY77931.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322688032|gb|EFY83998.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194387|gb|EFZ79582.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197802|gb|EFZ82934.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203402|gb|EFZ88427.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206853|gb|EFZ91806.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210378|gb|EFZ95270.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214620|gb|EFZ99371.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223176|gb|EGA07519.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224853|gb|EGA09116.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230057|gb|EGA14177.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233795|gb|EGA17884.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238511|gb|EGA22569.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244199|gb|EGA28208.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246359|gb|EGA30342.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251985|gb|EGA35848.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257982|gb|EGA41661.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259921|gb|EGA43552.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265065|gb|EGA48564.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272628|gb|EGA56035.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 204 Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 8/134 (5%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G A + + G + SPY + R W + S + ++ Sbjct: 51 LRSALVSLDGEKAMAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEQMQ 105 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 106 SDEIRFETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---A 162 Query: 285 YELELQKREEIANI 298 + LE Q++ E A + Sbjct: 163 WRLEQQRQNECAAL 176 >gi|323938779|gb|EGB35025.1| RF-1 domain-containing protein [Escherichia coli E1520] Length = 185 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 15/164 (9%) Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LL ++TR + LE G + ++SA + + G NA+ + G + + SP Sbjct: 7 LLVVFTR----QDVAVTVLETETGRYSDTLRSALISLDGDNAWALSESWCGTIQWICPSP 62 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC-RIDTYRASGAGGQHVNTTDSAVRITH 254 Y + R F I + E +SD R +T R+SG GGQHVN TDSAVR TH Sbjct: 63 YRPHHGRKNWFLGIGRFTA------DEQEQSDAVRYETLRSSGPGGQHVNKTDSAVRATH 116 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 + TG+ V+ Q ERSQH NK A ++ + LE Q++E A + Sbjct: 117 LATGISVKVQSERSQHANKRLARLLI---AWRLEQQQQENSAAL 157 >gi|300934927|ref|ZP_07149981.1| putative peptide chain release factor H [Escherichia coli MS 21-1] gi|300459833|gb|EFK23326.1| putative peptide chain release factor H [Escherichia coli MS 21-1] Length = 204 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQQQENSAAL 176 >gi|332829815|gb|EGK02457.1| peptide chain release factor H [Dysgonomonas gadei ATCC BAA-286] Length = 207 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 8/182 (4%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPN 176 YL++ +G G E + + A+K E +E GE + SA + I+G Sbjct: 7 YLQITSGRGPAECGRVVALTVEKILTQAKKIGLDVEVVEREPGEINRTLFSAVISIEGLK 66 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A ++ +G + + SPY +R F + + + D + E + T RAS Sbjct: 67 ADEIVREWEGTIQWIAQSPYRIYHKRKNWFVGVRSFTIPDKH---NVDEREISYQTLRAS 123 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL----YELELQKR 292 G GGQHVN T+SAVR THI +G+ V +RSQ +NK A L KL E +QK Sbjct: 124 GPGGQHVNKTESAVRATHISSGLSVTASDQRSQLQNKKLAVERLLIKLAAWNMEQNMQKA 183 Query: 293 EE 294 +E Sbjct: 184 QE 185 >gi|268592903|ref|ZP_06127124.1| putative peptide chain release factor H [Providencia rettgeri DSM 1131] gi|291311693|gb|EFE52146.1| putative peptide chain release factor H [Providencia rettgeri DSM 1131] Length = 203 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 13/165 (7%) Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY----PVVDDSI 219 G+KSA + ++G NA + G + S +R F S+ + P+ D I Sbjct: 48 GLKSALISLEGENAEILSQKWTGTIQWQCQSQIRPRHKRKNWFLSVTRFSPIKPIEDSEI 107 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 E E + +A GAGGQHVN T SAVR H+ TG+ V+ Q ERSQH NK A + Sbjct: 108 EFEFT---------KAQGAGGQHVNKTSSAVRAKHVATGITVKVQSERSQHANKKLAKQL 158 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ++ KL E + Q+ E+ S +I G + ++ ++ +K Sbjct: 159 IQWKLNEHQSQQLNELDKQRHHSHYQIERGNAVMTFSGNEFKRLK 203 >gi|163754646|ref|ZP_02161768.1| putative peptide chain release factor [Kordia algicida OT-1] gi|161325587|gb|EDP96914.1| putative peptide chain release factor [Kordia algicida OT-1] Length = 198 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 3/96 (3%) Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 QG + + SPY ++ +R F + VY + +I S + ++ T R+SGAGGQHVN Sbjct: 69 QGSIQFIFRSPYRAHHQRKNWFVDVKVYVM---PTQISWSPKEIQVKTARSSGAGGQHVN 125 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++AV + HIPTG+ VQ +ERSQ NK A+ L Sbjct: 126 KVETAVSMIHIPTGITVQASEERSQFLNKKLAFARL 161 >gi|117622538|ref|YP_851451.1| peptide chain release factor-like protein [Escherichia coli APEC O1] gi|115511662|gb|ABI99736.1| peptide chain release factor-like protein [Escherichia coli APEC O1] Length = 232 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 79 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 132 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 133 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 189 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 190 AWKLEQQQQENSAAL 204 >gi|149626821|ref|XP_001515177.1| PREDICTED: similar to peptide chain release factor 1, putative, partial [Ornithorhynchus anatinus] Length = 612 Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 81/171 (47%), Gaps = 31/171 (18%) Query: 129 ESQDWANMLLRMYTRWA-----EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 E+ +AN L MY + + + LEI D L NA +L Sbjct: 108 EAAYFANELFEMYKNFCHSTNIQNTQINQNTLEIFD-----------LGFSQNA-KYLLY 155 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPV----------VDDSIEI--EISESDCRID 231 E GVHR+ RI P +SN R TS + + V P DS I SD ++ Sbjct: 156 EFGVHRVQRI-PKNSN-RIQTSTAVVTVVPTGWSSCHGGRGSKDSPHIGDSFKPSDVIME 213 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 T R+ GAGGQ VN +++AVR+TH+PTG+ V CQ SQ NK+ A ++ Sbjct: 214 TMRSRGAGGQSVNKSETAVRVTHVPTGMSVSCQDTSSQIDNKSLALGKVKG 264 >gi|218698820|ref|YP_002406449.1| peptide chain release factor-like protein [Escherichia coli IAI39] gi|218368806|emb|CAR16554.1| putative peptide chain release factor [Escherichia coli IAI39] Length = 166 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 125 -WKLEQQQQENSAAL 138 >gi|237707745|ref|ZP_04538226.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA] gi|306813274|ref|ZP_07447467.1| peptide chain release factor-like protein [Escherichia coli NC101] gi|91070898|gb|ABE05779.1| peptide chain release factor-like protein [Escherichia coli UTI89] gi|226898955|gb|EEH85214.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA] gi|281177449|dbj|BAI53779.1| peptide chain release factor [Escherichia coli SE15] gi|294492701|gb|ADE91457.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli IHE3034] gi|305854037|gb|EFM54476.1| peptide chain release factor-like protein [Escherichia coli NC101] gi|307628262|gb|ADN72566.1| peptide chain release factor-like protein [Escherichia coli UM146] gi|315287746|gb|EFU47149.1| putative peptide chain release factor H [Escherichia coli MS 110-3] gi|320197281|gb|EFW71897.1| peptide chain release factor-like protein [Escherichia coli WV_060327] gi|323953122|gb|EGB48990.1| RF-1 domain-containing protein [Escherichia coli H252] gi|323958696|gb|EGB54397.1| RF-1 domain-containing protein [Escherichia coli H263] gi|324010206|gb|EGB79425.1| putative peptide chain release factor H [Escherichia coli MS 57-2] Length = 204 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQQQENSAAL 176 >gi|78066331|ref|YP_369100.1| peptide chain release factor-like protein [Burkholderia sp. 383] gi|77967076|gb|ABB08456.1| Class I peptide chain release factor [Burkholderia sp. 383] Length = 204 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 6/156 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177 +++ + G E Q A LR A+ ++ L+ GE G ++SA L + G A Sbjct: 3 MQISSAHGPLECQLAAANALRRLQAEADAQRVVVTVLDAEPGERPGTLRSALLDLDGAGA 62 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 G + + SPY R W V + + + D R + RA G Sbjct: 63 QALADRWTGTLQWICASPYRLRHPRKN-----WFIGVTRCADAQPLPDGDVRFEAMRARG 117 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 GGQHVN T SA+R TH+ TG+ V+ + ERSQH NK Sbjct: 118 PGGQHVNKTSSAIRATHVATGLSVRVESERSQHANK 153 >gi|220679233|emb|CAX12804.1| novel protein similar to H.sapiens MTRF1L, mitochondrial translational release factor 1-like (MTRF1L) [Danio rerio] Length = 273 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 18/156 (11%) Query: 59 IKEIQDRLCDN-LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 ++++QD L DN LLELA E + ++L + D Q+ E+D ++ Sbjct: 127 MEDMQDLLKDNDPELLELA-ETEKEAVLADIQDLRQK----------------ESDMSEL 169 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 LEV AG GG E+ + + MY +A + + LE + E G++ A+ + GP + Sbjct: 170 VLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASVSGPLS 229 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 Y LK E GVHR+ R+ +S R HTS ++ + P Sbjct: 230 YKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILP 265 >gi|227884748|ref|ZP_04002553.1| peptide chain release factor family protein [Escherichia coli 83972] gi|300977367|ref|ZP_07173858.1| putative peptide chain release factor H [Escherichia coli MS 45-1] gi|301045877|ref|ZP_07193064.1| putative peptide chain release factor H [Escherichia coli MS 185-1] gi|331656314|ref|ZP_08357276.1| putative peptide chain release factor H [Escherichia coli TA206] gi|331681653|ref|ZP_08382286.1| putative peptide chain release factor H [Escherichia coli H299] gi|26106678|gb|AAN78863.1|AE016756_46 Peptide chain release factor homolog [Escherichia coli CFT073] gi|222032084|emb|CAP74823.1| Peptide chain release factor homolog [Escherichia coli LF82] gi|227838349|gb|EEJ48815.1| peptide chain release factor family protein [Escherichia coli 83972] gi|300302127|gb|EFJ58512.1| putative peptide chain release factor H [Escherichia coli MS 185-1] gi|300409892|gb|EFJ93430.1| putative peptide chain release factor H [Escherichia coli MS 45-1] gi|307552166|gb|ADN44941.1| peptide chain release factor-like protein [Escherichia coli ABU 83972] gi|312944860|gb|ADR25687.1| peptide chain release factor-like protein [Escherichia coli O83:H1 str. NRG 857C] gi|315295160|gb|EFU54495.1| putative peptide chain release factor H [Escherichia coli MS 153-1] gi|315300862|gb|EFU60084.1| putative peptide chain release factor H [Escherichia coli MS 16-3] gi|323191394|gb|EFZ76656.1| putative peptide chain release factor H [Escherichia coli RN587/1] gi|331054562|gb|EGI26571.1| putative peptide chain release factor H [Escherichia coli TA206] gi|331080855|gb|EGI52020.1| putative peptide chain release factor H [Escherichia coli H299] Length = 204 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQQQENSAAL 176 >gi|239623937|ref|ZP_04666968.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47_FAA] gi|239521968|gb|EEQ61834.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47FAA] Length = 196 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 4/122 (3%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+ RR F + + + D+ E + R +T+ + G GGQHVN ++ VRI Sbjct: 70 SPFRPEHRRKNWFIDVSILEQLPDARE----DMKLRFETFCSGGKGGQHVNKVETGVRII 125 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+PTG+ V + RSQH NK A N L L ++EL+ R+ + T + G +R Sbjct: 126 HVPTGISVVSTEARSQHMNKKLAMNRLCDILADMELENRQREKELAWLEHTRLERGNPVR 185 Query: 314 SY 315 Y Sbjct: 186 IY 187 >gi|293403381|ref|ZP_06647472.1| prfH [Escherichia coli FVEC1412] gi|293408390|ref|ZP_06652229.1| peptide chain release factor H [Escherichia coli B354] gi|298378993|ref|ZP_06988874.1| prfH [Escherichia coli FVEC1302] gi|300898963|ref|ZP_07117256.1| putative peptide chain release factor H [Escherichia coli MS 198-1] gi|59889806|emb|CAH19162.1| Probable peptide chain release factor [Escherichia coli] gi|284920069|emb|CBG33127.1| putative peptide chain release factor [Escherichia coli 042] gi|291429234|gb|EFF02254.1| prfH [Escherichia coli FVEC1412] gi|291471568|gb|EFF14051.1| peptide chain release factor H [Escherichia coli B354] gi|298280106|gb|EFI21610.1| prfH [Escherichia coli FVEC1302] gi|300357405|gb|EFJ73275.1| putative peptide chain release factor H [Escherichia coli MS 198-1] Length = 204 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQQQENSAAL 176 >gi|303240867|ref|ZP_07327379.1| peptide chain release factor H [Acetivibrio cellulolyticus CD2] gi|302591595|gb|EFL61331.1| peptide chain release factor H [Acetivibrio cellulolyticus CD2] Length = 204 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 ++++ +G G E + ++ L+ Y + + T ++ G +G + LL A Sbjct: 2 WIQISSGKGPDECELAVSLFLKSYQNECKNKGIITNVIDAIPGNISGNLKSVLLSLECQA 61 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 L G + SPY N +R F ++ + + ++ SE D ++ R+SG Sbjct: 62 QEEL---NGTVLWICKSPYRPNHKRKNWFINVEAFQSTE---KLNFSEKDVSFESMRSSG 115 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 GGQ+VN +SAVR H+PTG+ V +ERSQ+ NK A Sbjct: 116 PGGQNVNKVESAVRAIHLPTGLTVTASEERSQYMNKKLA 154 >gi|170684096|ref|YP_001742396.1| peptide chain release factor-like protein [Escherichia coli SMS-3-5] gi|170521814|gb|ACB19992.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5] Length = 204 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 MRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQQQENSAAL 176 >gi|194432592|ref|ZP_03064878.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012] gi|194419153|gb|EDX35236.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012] gi|320178936|gb|EFW53898.1| peptide chain release factor-like protein [Shigella boydii ATCC 9905] gi|332085764|gb|EGI90928.1| putative peptide chain release factor H [Shigella dysenteriae 155-74] gi|332094999|gb|EGJ00038.1| putative peptide chain release factor H [Shigella boydii 5216-82] Length = 204 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQG 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 162 AWKLEQQQQENSA 174 >gi|253689801|ref|YP_003018991.1| peptide chain release factor H [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756379|gb|ACT14455.1| peptide chain release factor H [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 207 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 14/141 (9%) Query: 160 GEEAG-IKSATLLIKG----PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 G+ +G ++SA +L+ G P A W G + SP+ R W V Sbjct: 45 GKRSGTLRSALVLLNGDRTEPLAASWC----GTLQWTCNSPWRKGGGRKN-----WFIGV 95 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 E ++++ R + ++SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK Sbjct: 96 ARFHQEQAFADNEIRFEATKSSGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKR 155 Query: 275 QAWNMLRAKLYELELQKREEI 295 A ++ +L L+ Q+ E+ Sbjct: 156 LACYLIAYRLKALQQQQHAEL 176 >gi|191171385|ref|ZP_03032934.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11] gi|300991271|ref|ZP_07179531.1| putative peptide chain release factor H [Escherichia coli MS 200-1] gi|110342064|gb|ABG68301.1| putative peptide chain release factor [Escherichia coli 536] gi|190908319|gb|EDV67909.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11] gi|300305588|gb|EFJ60108.1| putative peptide chain release factor H [Escherichia coli MS 200-1] gi|324015571|gb|EGB84790.1| putative peptide chain release factor H [Escherichia coli MS 60-1] Length = 204 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQQQENSAAL 176 >gi|312964708|ref|ZP_07778959.1| putative peptide chain release factor H [Escherichia coli 2362-75] gi|312290729|gb|EFR18607.1| putative peptide chain release factor H [Escherichia coli 2362-75] Length = 204 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQQQENSAAL 176 >gi|161486311|ref|NP_752319.2| peptide chain release factor-like protein [Escherichia coli CFT073] gi|162138491|ref|YP_539310.2| peptide chain release factor-like protein [Escherichia coli UTI89] gi|218557192|ref|YP_002390105.1| peptide chain release factor-like protein [Escherichia coli S88] gi|218688128|ref|YP_002396340.1| peptide chain release factor-like protein [Escherichia coli ED1a] gi|218363961|emb|CAR01626.1| putative peptide chain release factor [Escherichia coli S88] gi|218425692|emb|CAR06484.1| putative peptide chain release factor [Escherichia coli ED1a] Length = 166 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 125 -WKLEQQQQENSAAL 138 >gi|193063214|ref|ZP_03044305.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22] gi|194427638|ref|ZP_03060186.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171] gi|260842481|ref|YP_003220259.1| putative peptide chain release factor RF-1 [Escherichia coli O103:H2 str. 12009] gi|192931122|gb|EDV83725.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22] gi|194414408|gb|EDX30682.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171] gi|257757628|dbj|BAI29125.1| predicted peptide chain release factor RF-1 [Escherichia coli O103:H2 str. 12009] Length = 204 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALISLDGDNAWALSESWCGAIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 162 AWKLEQQQQENSA 174 >gi|293418352|ref|ZP_06660787.1| peptide chain release factor H [Escherichia coli B088] gi|291324880|gb|EFE64295.1| peptide chain release factor H [Escherichia coli B088] gi|323945388|gb|EGB41442.1| RF-1 domain-containing protein [Escherichia coli H120] gi|324115579|gb|EGC09518.1| RF-1 domain-containing protein [Escherichia coli E1167] Length = 204 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 162 AWKLEQQQQENSA 174 >gi|194438235|ref|ZP_03070327.1| putative peptide chain release factor H [Escherichia coli 101-1] gi|253774739|ref|YP_003037570.1| peptide chain release factor-like protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160350|ref|YP_003043458.1| peptide chain release factor-like protein [Escherichia coli B str. REL606] gi|297520538|ref|ZP_06938924.1| peptide chain release factor-like protein [Escherichia coli OP50] gi|312970362|ref|ZP_07784543.1| putative peptide chain release factor H [Escherichia coli 1827-70] gi|194422899|gb|EDX38894.1| putative peptide chain release factor H [Escherichia coli 101-1] gi|242376066|emb|CAQ30751.1| prfH [Escherichia coli BL21(DE3)] gi|253325783|gb|ACT30385.1| peptide chain release factor H [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972251|gb|ACT37922.1| peptide chain release factor 2 [Escherichia coli B str. REL606] gi|253976460|gb|ACT42130.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)] gi|310337011|gb|EFQ02149.1| putative peptide chain release factor H [Escherichia coli 1827-70] gi|332341589|gb|AEE54923.1| peptide chain release factor-like protein PrfH [Escherichia coli UMNK88] Length = 166 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EKE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 125 -WKLEQQQQENSAAL 138 >gi|162138281|ref|YP_668200.2| peptide chain release factor-like protein [Escherichia coli 536] Length = 166 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 125 -WKLEQQQQENSAAL 138 >gi|215485384|ref|YP_002327815.1| peptide chain release factor-like protein [Escherichia coli O127:H6 str. E2348/69] gi|215263456|emb|CAS07777.1| predicted peptide chain release factor [Escherichia coli O127:H6 str. E2348/69] Length = 193 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQQQENSAAL 176 >gi|218703550|ref|YP_002411069.1| peptide chain release factor-like protein [Escherichia coli UMN026] gi|218430647|emb|CAR11515.1| putative peptide chain release factor [Escherichia coli UMN026] Length = 166 Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 125 -WKLEQQQQENSAAL 138 >gi|323160301|gb|EFZ46254.1| putative peptide chain release factor H [Escherichia coli E128010] Length = 166 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGAIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 125 -WKLEQQQQENSA 136 >gi|260853488|ref|YP_003227379.1| putative peptide chain release factor RF-1 [Escherichia coli O26:H11 str. 11368] gi|260866434|ref|YP_003232836.1| putative peptide chain release factor RF-1 [Escherichia coli O111:H- str. 11128] gi|257752137|dbj|BAI23639.1| predicted peptide chain release factor RF-1 [Escherichia coli O26:H11 str. 11368] gi|257762790|dbj|BAI34285.1| predicted peptide chain release factor RF-1 [Escherichia coli O111:H- str. 11128] gi|323178470|gb|EFZ64048.1| putative peptide chain release factor H [Escherichia coli 1180] Length = 204 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 162 AWKLEQQQQENSA 174 >gi|407639|gb|AAD12326.1| unknown [Mycoplasma genitalium] Length = 113 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 6/110 (5%) Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PTG+VV CQ+ +SQ N+ +A MLRAKL+E K +++ + K++ Sbjct: 1 TESAVRITHLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNK--QLSTQADLRKSQ 58 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G G +IR+Y P + D R + + V+ GDLD+ ++A A Sbjct: 59 VGSGERAEKIRTYNY-PQNRITDHRIKLTINKLNTVILGDLDEIIEALQA 107 >gi|89107109|ref|AP_000889.1| predicted peptide chain release factor [Escherichia coli str. K-12 substr. W3110] gi|256024120|ref|ZP_05437985.1| peptide chain release factor-like protein [Escherichia sp. 4_1_40B] gi|307136901|ref|ZP_07496257.1| peptide chain release factor-like protein [Escherichia coli H736] gi|331640765|ref|ZP_08341900.1| putative peptide chain release factor H [Escherichia coli H736] gi|115311624|sp|P28369|RFH_ECOLI RecName: Full=Putative peptide chain release factor homolog; Short=RF-H gi|1552804|gb|AAB08656.1| PrfH [Escherichia coli] gi|85674391|dbj|BAA77905.2| predicted peptide chain release factor [Escherichia coli str. K12 substr. W3110] gi|315134921|dbj|BAJ42080.1| peptide chain release factor 2 [Escherichia coli DH1] gi|315616801|gb|EFU97418.1| putative peptide chain release factor H [Escherichia coli 3431] gi|331037563|gb|EGI09783.1| putative peptide chain release factor H [Escherichia coli H736] Length = 166 Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 125 -WKLEQQQQENSAAL 138 >gi|331651168|ref|ZP_08352193.1| putative peptide chain release factor H [Escherichia coli M718] gi|331050909|gb|EGI22961.1| putative peptide chain release factor H [Escherichia coli M718] Length = 166 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 67 QSDAIRYETQRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 123 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 124 AWKLEQQQQENSAAL 138 >gi|168238579|ref|ZP_02663637.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735122|ref|YP_002113341.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710624|gb|ACF89845.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288612|gb|EDY27989.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 204 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 9/181 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 L++ + G E L T+ A + K LE G ++SA + + G A Sbjct: 4 LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + G + SPY + R W + S + ++ + +T R+SG Sbjct: 64 MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEQMQSDEIHFETLRSSG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ + LE Q++ E A Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNECAA 175 Query: 298 I 298 + Sbjct: 176 L 176 >gi|320654680|gb|EFX22681.1| peptide chain release factor-like protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 166 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + +SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R SG GGQHVN TD AVR TH+ TG+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRPSGPGGQHVNKTDLAVRATHLATGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 125 -WKLEQQQQENSA 136 >gi|323963546|gb|EGB59104.1| RF-1 domain-containing protein [Escherichia coli H489] Length = 185 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + E Sbjct: 32 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTA------DEKE 85 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 86 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 142 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 143 AWKLEQQQQENSAAL 157 >gi|256020250|ref|ZP_05434115.1| peptide chain release factor-like protein [Shigella sp. D9] gi|332281412|ref|ZP_08393825.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9] gi|323181570|gb|EFZ66990.1| putative peptide chain release factor H [Escherichia coli 1357] gi|332103764|gb|EGJ07110.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9] Length = 204 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + E Sbjct: 51 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTAN------EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 162 AWKLEQQQQENSA 174 >gi|323158080|gb|EFZ44179.1| putative peptide chain release factor H [Escherichia coli EPECa14] Length = 166 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 125 -WKLEQQQQENSA 136 >gi|218550059|ref|YP_002383850.1| peptide chain release factor-like protein [Escherichia fergusonii ATCC 35469] gi|218357600|emb|CAQ90239.1| putative peptide chain release factor [Escherichia fergusonii ATCC 35469] Length = 166 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 125 -WKLEQQQQENSAAL 138 >gi|218693719|ref|YP_002401386.1| peptide chain release factor-like protein [Escherichia coli 55989] gi|218350451|emb|CAU96139.1| putative peptide chain release factor [Escherichia coli 55989] Length = 166 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 125 -WKLEQQQQENSA 136 >gi|157156041|ref|YP_001461424.1| peptide chain release factor-like protein [Escherichia coli E24377A] gi|187732116|ref|YP_001879031.1| peptide chain release factor-like protein [Shigella boydii CDC 3083-94] gi|300817246|ref|ZP_07097464.1| putative peptide chain release factor H [Escherichia coli MS 107-1] gi|300823448|ref|ZP_07103578.1| putative peptide chain release factor H [Escherichia coli MS 119-7] gi|307313497|ref|ZP_07593118.1| peptide chain release factor H [Escherichia coli W] gi|309797856|ref|ZP_07692238.1| putative peptide chain release factor H [Escherichia coli MS 145-7] gi|331666568|ref|ZP_08367442.1| putative peptide chain release factor H [Escherichia coli TA271] gi|157078071|gb|ABV17779.1| putative peptide chain release factor H [Escherichia coli E24377A] gi|187429108|gb|ACD08382.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii CDC 3083-94] gi|300524066|gb|EFK45135.1| putative peptide chain release factor H [Escherichia coli MS 119-7] gi|300530222|gb|EFK51284.1| putative peptide chain release factor H [Escherichia coli MS 107-1] gi|306906665|gb|EFN37176.1| peptide chain release factor H [Escherichia coli W] gi|308118540|gb|EFO55802.1| putative peptide chain release factor H [Escherichia coli MS 145-7] gi|320176701|gb|EFW51738.1| peptide chain release factor-like protein [Shigella dysenteriae CDC 74-1112] gi|320185048|gb|EFW59829.1| peptide chain release factor-like protein [Shigella flexneri CDC 796-83] gi|323379877|gb|ADX52145.1| peptide chain release factor H [Escherichia coli KO11] gi|331065792|gb|EGI37676.1| putative peptide chain release factor H [Escherichia coli TA271] Length = 204 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 162 AWKLEQQQQENSA 174 >gi|222100136|ref|YP_002534704.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359] gi|221572526|gb|ACM23338.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359] Length = 160 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 2/136 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + + + + L L K DP +W + +A+ ++ + L N +K + Sbjct: 15 LEKKFKDVLSIVNEEEVNRELKELEKKLSDPSVWDDQKKAREYTQKLKRLKNISEDLKRV 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D + +EL+ E+D ++ + + +Q ++ V+ + E +L+G+ D N+AYL VH Sbjct: 75 RSLFEDLEVAIELS--EEDMDMVNQVEEIVQDLEKAVKKLELEIILNGKYDPNNAYLSVH 132 Query: 123 AGAGGTESQDWANMLL 138 GAGGTESQDWA MLL Sbjct: 133 PGAGGTESQDWAQMLL 148 >gi|218552840|ref|YP_002385753.1| peptide chain release factor-like protein [Escherichia coli IAI1] gi|218359608|emb|CAQ97149.1| putative peptide chain release factor [Escherichia coli IAI1] Length = 166 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 125 -WKLEQQQQENSA 136 >gi|209917447|ref|YP_002291531.1| peptide chain release factor-like protein [Escherichia coli SE11] gi|209910706|dbj|BAG75780.1| peptide chain release factor [Escherichia coli SE11] Length = 202 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 49 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 102 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 103 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 159 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 160 AWKLEQQQQENSA 172 >gi|323943355|gb|EGB39508.1| RF-1 domain-containing protein [Escherichia coli E482] Length = 185 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 15/164 (9%) Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LL ++TR + LE G + ++SA + + G NA+ + G + + SP Sbjct: 7 LLVVFTR----QDVAVTVLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSP 62 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC-RIDTYRASGAGGQHVNTTDSAVRITH 254 Y + R F I + E +SD R +T R+SG GGQHVN TDSAVR TH Sbjct: 63 YRPHHGRKNWFLGIGRFTA------DEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATH 116 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 + +G+ V+ Q ERSQH NK A ++ ++LE Q++E A + Sbjct: 117 LASGISVKVQSERSQHANKRLARLLI---AWKLEQQQQENSAAL 157 >gi|300929514|ref|ZP_07144981.1| putative peptide chain release factor H [Escherichia coli MS 187-1] gi|300462556|gb|EFK26049.1| putative peptide chain release factor H [Escherichia coli MS 187-1] gi|323972417|gb|EGB67624.1| RF-1 domain-containing protein [Escherichia coli TA007] Length = 178 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + E Sbjct: 25 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTA------DEKE 78 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 79 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 135 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 136 AWKLEQQQQENSAAL 150 >gi|331675918|ref|ZP_08376635.1| putative peptide chain release factor H [Escherichia coli H591] gi|331076478|gb|EGI47755.1| putative peptide chain release factor H [Escherichia coli H591] Length = 232 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + E Sbjct: 79 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTA------DEQE 132 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 133 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 189 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 190 AWKLEQQQQENSA 202 >gi|255556733|ref|XP_002519400.1| peptide chain release factor, putative [Ricinus communis] gi|223541467|gb|EEF43017.1| peptide chain release factor, putative [Ricinus communis] Length = 185 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 29/47 (61%), Positives = 38/47 (80%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 C +DTY+ASG GGQH N +SAVRI H+PTG++ Q ++RSQHKN+A Sbjct: 4 CEMDTYKASGPGGQHRNKRESAVRIKHLPTGIISQAVEDRSQHKNRA 50 >gi|74310877|ref|YP_309296.1| peptide chain release factor-like protein [Shigella sonnei Ss046] gi|82542839|ref|YP_406786.1| peptide chain release factor-like protein [Shigella boydii Sb227] gi|188494291|ref|ZP_03001561.1| putative peptide chain release factor H [Escherichia coli 53638] gi|73854354|gb|AAZ87061.1| probable peptide chain release factor [Shigella sonnei Ss046] gi|81244250|gb|ABB64958.1| probable peptide chain release factor [Shigella boydii Sb227] gi|188489490|gb|EDU64593.1| putative peptide chain release factor H [Escherichia coli 53638] gi|323171088|gb|EFZ56737.1| putative peptide chain release factor H [Escherichia coli LT-68] gi|332098554|gb|EGJ03520.1| putative peptide chain release factor H [Shigella boydii 3594-74] Length = 166 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 13 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 124 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 125 -WKLEQQQQENSA 136 >gi|157159718|ref|YP_001457036.1| peptide chain release factor-like protein [Escherichia coli HS] gi|191165713|ref|ZP_03027552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A] gi|300921975|ref|ZP_07138121.1| putative peptide chain release factor H [Escherichia coli MS 182-1] gi|301325442|ref|ZP_07218928.1| putative peptide chain release factor H [Escherichia coli MS 78-1] gi|157065398|gb|ABV04653.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS] gi|190904220|gb|EDV63930.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A] gi|300421645|gb|EFK04956.1| putative peptide chain release factor H [Escherichia coli MS 182-1] gi|300847740|gb|EFK75500.1| putative peptide chain release factor H [Escherichia coli MS 78-1] gi|320201148|gb|EFW75731.1| peptide chain release factor-like protein [Escherichia coli EC4100B] gi|323169568|gb|EFZ55240.1| putative peptide chain release factor H [Shigella sonnei 53G] gi|324019875|gb|EGB89094.1| putative peptide chain release factor H [Escherichia coli MS 117-3] Length = 204 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 10/133 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIA 296 ++LE Q++E A Sbjct: 162 AWKLEQQQQENSA 174 >gi|300947294|ref|ZP_07161497.1| putative peptide chain release factor H [Escherichia coli MS 116-1] gi|300955685|ref|ZP_07168035.1| putative peptide chain release factor H [Escherichia coli MS 175-1] gi|301643547|ref|ZP_07243589.1| putative peptide chain release factor H [Escherichia coli MS 146-1] gi|260450569|gb|ACX40991.1| peptide chain release factor H [Escherichia coli DH1] gi|300317436|gb|EFJ67220.1| putative peptide chain release factor H [Escherichia coli MS 175-1] gi|300453095|gb|EFK16715.1| putative peptide chain release factor H [Escherichia coli MS 116-1] gi|301078047|gb|EFK92853.1| putative peptide chain release factor H [Escherichia coli MS 146-1] Length = 178 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + E Sbjct: 25 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTA------DEQE 78 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 79 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 135 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 136 AWKLEQQQQENSAAL 150 >gi|37523609|ref|NP_926986.1| hypothetical protein glr4040 [Gloeobacter violaceus PCC 7421] gi|35214614|dbj|BAC91981.1| glr4040 [Gloeobacter violaceus PCC 7421] Length = 125 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 5/80 (6%) Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + YP ++ E E DC ++ ASG GGQH N T+S VR+TH P+GVVV + RS Sbjct: 11 LPAYP-----LDREALERDCTLEFVIASGPGGQHRNKTESGVRLTHRPSGVVVSATERRS 65 Query: 269 QHKNKAQAWNMLRAKLYELE 288 QH+N+ A+ + AKL +L+ Sbjct: 66 QHQNREVAFERMAAKLADLQ 85 >gi|313111591|ref|ZP_07797390.1| putative peptide chain release factor [Pseudomonas aeruginosa 39016] gi|310883892|gb|EFQ42486.1| putative peptide chain release factor [Pseudomonas aeruginosa 39016] Length = 204 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 5/80 (6%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY + R F S+E EI R +T R+SG GGQHVNTTDSAVR T Sbjct: 80 SPYRARHARKNWFIGAERLAAPPASLEGEI-----RFETLRSSGPGGQHVNTTDSAVRAT 134 Query: 254 HIPTGVVVQCQQERSQHKNK 273 H+ +G+ V+ Q +RSQH NK Sbjct: 135 HLASGISVRVQSQRSQHANK 154 >gi|205351639|ref|YP_002225440.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271420|emb|CAR36228.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626670|gb|EGE33013.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 204 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 9/181 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 L++ + G E L T+ A + K LE G ++SA + + G A Sbjct: 4 LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + G + SPY + R W + S + I + R +T R+SG Sbjct: 64 MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ + LE Q++ A Sbjct: 119 PGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLI---AWRLEQQRQNGCAA 175 Query: 298 I 298 + Sbjct: 176 L 176 >gi|168701291|ref|ZP_02733568.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246] Length = 185 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 C +DTYRASG GGQ N T SAVR+ H PTG++V ++ RSQH+NKA+A L L+ L Sbjct: 28 CEVDTYRASGPGGQKRNKTSSAVRLRHAPTGLIVIAEESRSQHENKAKALKRLWHALF-L 86 Query: 288 ELQ 290 EL+ Sbjct: 87 ELR 89 >gi|229815133|ref|ZP_04445470.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM 13280] gi|229809363|gb|EEP45128.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM 13280] Length = 126 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 S+ I+ DC I +RASG GGQ VNTTDSAVR+ H+P+G+VV ++ RSQ +N+A Sbjct: 16 SMPIDELVRDCDIQAFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCL 75 Query: 278 NMLRAKLYELELQKREEIAN-IGESSKT 304 L+ +L ++ +A G+++K Sbjct: 76 RKLKEELTRRARPFKKRVATKPGKAAKA 103 >gi|24111726|ref|NP_706236.1| peptide chain release factor 2 [Shigella flexneri 2a str. 301] gi|30061853|ref|NP_836024.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T] gi|24050507|gb|AAN41943.1| probable peptide chain release factor [Shigella flexneri 2a str. 301] gi|30040097|gb|AAP15830.1| probable peptide chain release factor [Shigella flexneri 2a str. 2457T] Length = 151 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 8/131 (6%) Query: 145 AEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 A ++ LE G + ++SA + + G NA+ + G + + SPY + R Sbjct: 12 AARQDVAVTVLETETGRYSDTLRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRK 71 Query: 204 TSFSSIWVYPVVDDSIEIEISESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 F I + E +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Sbjct: 72 NWFLGIGRFTA------DEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVK 125 Query: 263 CQQERSQHKNK 273 Q ERSQH NK Sbjct: 126 VQSERSQHANK 136 >gi|323976247|gb|EGB71340.1| RF-1 domain-containing protein [Escherichia coli TW10509] Length = 204 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 8/134 (5%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + S E E S Sbjct: 51 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF----TSDEQEQS 106 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ++ +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 107 DA-IHYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI---A 162 Query: 285 YELELQKREEIANI 298 ++LE Q++E A + Sbjct: 163 WKLEQQRQENSAAL 176 >gi|210634150|ref|ZP_03298012.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279] gi|210158897|gb|EEA89868.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279] Length = 126 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 46/67 (68%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 S+ E +C + +RASG GGQ VNTTDSAVR+ H+P+G+VV ++ RSQ +N+A Sbjct: 16 SLTAEELARECEVQVFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCL 75 Query: 278 NMLRAKL 284 L+A+L Sbjct: 76 RKLKAEL 82 >gi|281599646|gb|ADA72630.1| putative peptide chain release factor H [Shigella flexneri 2002017] gi|313646632|gb|EFS11091.1| putative peptide chain release factor H [Shigella flexneri 2a str. 2457T] gi|332761634|gb|EGJ91914.1| putative peptide chain release factor H [Shigella flexneri 4343-70] gi|332761778|gb|EGJ92057.1| putative peptide chain release factor H [Shigella flexneri 2747-71] gi|332764451|gb|EGJ94684.1| putative peptide chain release factor H [Shigella flexneri K-671] gi|332768583|gb|EGJ98765.1| putative peptide chain release factor H [Shigella flexneri 2930-71] gi|333008731|gb|EGK28195.1| putative peptide chain release factor H [Shigella flexneri K-218] gi|333009717|gb|EGK29167.1| putative peptide chain release factor H [Shigella flexneri VA-6] gi|333010787|gb|EGK30213.1| putative peptide chain release factor H [Shigella flexneri K-272] gi|333021285|gb|EGK40538.1| putative peptide chain release factor H [Shigella flexneri K-227] gi|333022100|gb|EGK41343.1| putative peptide chain release factor H [Shigella flexneri K-304] Length = 131 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 7/110 (6%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + E Sbjct: 13 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTA------DEQE 66 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK Sbjct: 67 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANK 116 >gi|302823050|ref|XP_002993180.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii] gi|300139071|gb|EFJ05820.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii] Length = 221 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 4/89 (4%) Query: 265 QERSQHKNKAQAWNMLRAKLYE-LELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQM 322 +ERSQ +NK +A +L++KL LE QK EI I G+ K E WG++IR+YV PY++ Sbjct: 18 KERSQLENKIKAIALLKSKLLVILEEQKAAEIKEIRGDVVKAE--WGQEIRNYVFHPYRL 75 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V DLRTN+E + S ++DG+++ + A L Sbjct: 76 VHDLRTNVETSDISGIMDGNVEPLLTAYL 104 >gi|326525162|dbj|BAK07851.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 149 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 11/137 (8%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D+ +EI S C + R +GA VR+ HIP+GV + ERS NK + Sbjct: 20 DNDLEISPLPSKCE-NGDRRNGA----------TVRVQHIPSGVTAESSGERSYFANKLK 68 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A + L+AKL + + R + E E G R+ R Y L P ++V DL T I+ + Sbjct: 69 AVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHDLNTGIQLSDL 128 Query: 336 SDVLDGDLDDFMKATLA 352 + VL+GD++ F++ + Sbjct: 129 NSVLEGDIEPFIRGRIV 145 >gi|301019126|ref|ZP_07183330.1| putative peptide chain release factor H [Escherichia coli MS 69-1] gi|300399385|gb|EFJ82923.1| putative peptide chain release factor H [Escherichia coli MS 69-1] Length = 204 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 7/110 (6%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK Sbjct: 105 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANK 154 >gi|289807125|ref|ZP_06537754.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 145 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 6/137 (4%) Query: 138 LRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L T+ A + K LE G ++SA + + G A + + G + SPY Sbjct: 10 LDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKAMAFSERWCGTLLWICTSPY 69 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 + R W + S + I + R +T R+SG GGQHVN TDSAVR TH+ Sbjct: 70 RPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSGPGGQHVNKTDSAVRATHLA 124 Query: 257 TGVVVQCQQERSQHKNK 273 +G+ V+ Q ERSQH NK Sbjct: 125 SGISVKVQSERSQHANK 141 >gi|315652605|ref|ZP_07905584.1| chain release factor B [Eubacterium saburreum DSM 3986] gi|315485145|gb|EFU75548.1| chain release factor B [Eubacterium saburreum DSM 3986] Length = 199 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 15/209 (7%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L++ AG G E Q + + K E L DGEE + +L + Sbjct: 3 LQISAGMGPVECQRAVFGICKALM----KEIPSLEILSYVDGEEKETFYSVMLSSDED-- 56 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV---VDDSIEIEISESDCRIDTYRA 235 L +G + S Y +R F + + P VDD+ SE+D ++ + A Sbjct: 57 --LSYIEGTMLWICKSRYRPEHKRKNWFVDVSIIPETVNVDDNF----SEADIIVEKFHA 110 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQ+VN ++ VR+ HIPTG+ + +ERSQ NK A L L + E+ Sbjct: 111 SGPGGQNVNKVETGVRVIHIPTGIRISSTRERSQLMNKKDALRKLAIVLKNKNTSQIEQS 170 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 N S TEI G IR Y + +++ K Sbjct: 171 KNNAWSKHTEIVRGNPIRVYEGEKFRLKK 199 >gi|70729456|ref|YP_259194.1| peptide chain release factor-like protein [Pseudomonas fluorescens Pf-5] gi|68343755|gb|AAY91361.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf-5] Length = 206 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 55/94 (58%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 E + R + RASG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK A +++ Sbjct: 104 EAEGGEIRFEAMRASGPGGQHVNKTDSAVRATHVATGISVKVQSERSQHDNKRLARLLIQ 163 Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 +L + + Q +E+ + + G +R++ Sbjct: 164 QRLADRQEQSVQELRLQRRDAHHRVERGNAVRTF 197 >gi|317491073|ref|ZP_07949509.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920620|gb|EFV41943.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 205 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 5/131 (3%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+ + R F + Y D IE EI + ++ ++SG GGQHVN T+SA+R T Sbjct: 80 SPWRGGNGRKNWFIGVARYCFEDVVIEGEI-----KFESLKSSGPGGQHVNKTESAIRAT 134 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H+ +G+VV+ Q ERSQH NK A ++ KL + + + EI +I G +R Sbjct: 135 HLASGIVVKVQTERSQHANKRLAKLLIAHKLEQQQQNMQSEIKAQRRMFHHQITRGNPVR 194 Query: 314 SYVLQPYQMVK 324 + + VK Sbjct: 195 MFKGPDFTPVK 205 >gi|331671827|ref|ZP_08372623.1| putative peptide chain release factor H [Escherichia coli TA280] gi|331070816|gb|EGI42175.1| putative peptide chain release factor H [Escherichia coli TA280] Length = 232 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G +A+ + G + + SPY + R F I + D E Sbjct: 79 LRSALISLDGDSAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 132 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD R +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 133 QSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 189 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 190 AWKLEQQQQENSAAL 204 >gi|227538749|ref|ZP_03968798.1| peptide chain release factor family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241258|gb|EEI91273.1| peptide chain release factor family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 170 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 4/170 (2%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKG 174 D + V AG G E +++ + A + L+ +G G + SA+L I G Sbjct: 2 DKIIGVTAGRGPEECSWVVAQVIKKIIQEAATFDVEVRVLDRQEGSINGTVISASLQISG 61 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 N + G + + S + + +R F I V+ + + I E D R Sbjct: 62 ENCMAFAALWTGTIQWIGKSDFRKSHKRKNWF--IEVFEIKQSASWI-FDEKDVGYQAMR 118 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +SGAGGQHVN SAVR THIPTGV V RSQH+NK A L+ KL Sbjct: 119 SSGAGGQHVNKVSSAVRATHIPTGVSVVSMDSRSQHQNKKIATKRLQKKL 168 >gi|261885046|ref|ZP_06009085.1| peptide chain release factor 2 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 83 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%) Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L+++LYE EL K++E N E K+EIGWG QIRSYVL PYQ VKD R+ + +L Sbjct: 4 LKSRLYEFELMKQQEANNAIE--KSEIGWGHQIRSYVLFPYQQVKDTRSGEAYSQTDAIL 61 Query: 340 DGDLDDFMKATLAIKK 355 DGD+ +++ L +K Sbjct: 62 DGDIKKIIESVLISQK 77 >gi|212710167|ref|ZP_03318295.1| hypothetical protein PROVALCAL_01221 [Providencia alcalifaciens DSM 30120] gi|212687166|gb|EEB46694.1| hypothetical protein PROVALCAL_01221 [Providencia alcalifaciens DSM 30120] Length = 203 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 14/155 (9%) Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 + + A K TE LE ++ G+KS + + G +A + G + SP Sbjct: 26 FVKEAALLKVNTELLESCPSKQ-GLKSVLIALDGIHAEKMAERWSGTIQWQCQSPLRPRH 84 Query: 201 RRHTSFSSIWVY----PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +R F S+ ++ P+ + IE E ++S GAGGQHVN T SAVR H+ Sbjct: 85 KRKNWFISVMMFTPIQPLENSEIEYEFTQSQ---------GAGGQHVNKTCSAVRAKHVA 135 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TG+ V+ Q ERSQH NK A ++ KL E + Q+ Sbjct: 136 TGISVKVQSERSQHANKKLAKELIHWKLCEYQSQQ 170 >gi|331645440|ref|ZP_08346544.1| putative peptide chain release factor H [Escherichia coli M605] gi|331045602|gb|EGI17728.1| putative peptide chain release factor H [Escherichia coli M605] Length = 232 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 79 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 132 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A +L A Sbjct: 133 QSDAIHYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLA-RLLIA- 190 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 191 -WKLEQQQQENSAAL 204 >gi|330910076|gb|EGH38586.1| hypothetical protein ECAA86_00359 [Escherichia coli AA86] Length = 204 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIHYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQQQENSAAL 176 >gi|139437086|ref|ZP_01771246.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC 25986] gi|133776733|gb|EBA40553.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC 25986] Length = 132 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 45/66 (68%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + +E DC + +RA+G GGQ VNTTDSAVR+ H PTG+VV ++ RSQ +N++ Sbjct: 23 MSVEELARDCEVQVFRATGPGGQGVNTTDSAVRMKHGPTGIVVTARESRSQFQNRSCCLR 82 Query: 279 MLRAKL 284 LRA+L Sbjct: 83 KLRAEL 88 >gi|324114895|gb|EGC08861.1| RF-1 domain-containing protein [Escherichia fergusonii B253] Length = 204 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIHYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQRQENSAAL 176 >gi|312891971|ref|ZP_07751474.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603] gi|311295602|gb|EFQ72768.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603] Length = 205 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 4/167 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177 +++ +G G E + R+ + A++ + LE + + +G SAT++ +G Sbjct: 6 IQITSGKGPAECCRVVACVQRLMLKQAKQFGVDIQVLENREADLSGTFLSATMMAQGMQL 65 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + +G R + SPY +R F + + D ++ + D +++T R+SG Sbjct: 66 EVFRREWEGTIRWIAQSPYRRYHQRKNWFVGVAFF---DIKQLMQWNPKDVKLETTRSSG 122 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 GGQHVN ++AVR TH+P+G+ V RSQ +NK L AK+ Sbjct: 123 PGGQHVNKVETAVRGTHLPSGIQVMAMDSRSQLENKKLCLARLEAKI 169 >gi|293331715|ref|NP_001169537.1| hypothetical protein LOC100383413 [Zea mays] gi|224029957|gb|ACN34054.1| unknown [Zea mays] Length = 229 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 40/54 (74%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 C + T++ASG GGQH N +SAVR+ H+P G++ Q ++RSQHKN+A A + LR Sbjct: 10 CDMGTFKASGPGGQHCNKRESAVRLKHLPIGIIAQAVEDRSQHKNRASALSRLR 63 >gi|261345238|ref|ZP_05972882.1| putative peptide chain release factor H [Providencia rustigianii DSM 4541] gi|282566935|gb|EFB72470.1| putative peptide chain release factor H [Providencia rustigianii DSM 4541] Length = 203 Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 5/160 (3%) Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G+KS + ++G + + G + SP +R F S+ + + + Sbjct: 48 GLKSVLVSLEGKQSEQLVNVWSGTVQWQCQSPLRPRHKRKNWFISVIAFSPIQP-----L 102 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 ES+ + ++ GAGGQHVN T SAVR H+ TG+ V+ Q ERSQH NK A ++ K Sbjct: 103 EESEIEYEFTKSQGAGGQHVNKTCSAVRAKHVSTGISVKVQSERSQHANKRLAKELIHWK 162 Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 L E + Q+R ++ S +I G ++V ++ V Sbjct: 163 LSEFQSQQRTDLDKQRHHSHYQIERGNASITFVGNEFKRV 202 >gi|323965216|gb|EGB60674.1| RF-1 domain-containing protein [Escherichia coli M863] gi|327254578|gb|EGE66194.1| putative peptide chain release factor H [Escherichia coli STEC_7v] Length = 204 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIHYETLRSSGPGGQHVNKTDSAVRATHLASGIRVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQRQENSAAL 176 >gi|301631891|ref|XP_002945028.1| PREDICTED: hypothetical protein LOC100485311 [Xenopus (Silurana) tropicalis] Length = 782 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 7/154 (4%) Query: 163 AGIKSATLLIKGPN---AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 AG KS +L++G A WL QG + V SP+ RR F + V Sbjct: 626 AGFKS--VLLQGAASAAALQWLATWQGSVQCVFTSPWRPGHRRKNWF--VGVQRCAAPET 681 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + + RASG GGQHVNTTDSAV H+ +G+ V+ ERSQH NK A + Sbjct: 682 VAGLDDGAIVYQACRASGKGGQHVNTTDSAVHALHLASGIAVKVMGERSQHANKRLARAL 741 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 + +L E + + E+ T + GR +R Sbjct: 742 IALRLAERQTAQAEDAGRQRRLQHTAVQRGRPVR 775 >gi|146340|gb|AAA23958.1| peptide-chain-release factor 2 [Escherichia coli] Length = 72 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 KLYELE+QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDG Sbjct: 1 KLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGS 59 Query: 343 LDDFMKATL 351 LD F++A+L Sbjct: 60 LDQFIEASL 68 >gi|325498389|gb|EGC96248.1| prfH [Escherichia fergusonii ECD227] Length = 204 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 10/135 (7%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G NA+ + G + + SPY + R F I + D E Sbjct: 51 LRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRF-TAD-----EQE 104 Query: 225 ESDC-RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ Sbjct: 105 QSDAIHYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLI--- 161 Query: 284 LYELELQKREEIANI 298 ++LE Q++E A + Sbjct: 162 AWKLEQQQQENSAAL 176 >gi|104779685|ref|YP_606183.1| peptide chain release factor-like protein [Pseudomonas entomophila L48] gi|95108672|emb|CAK13366.1| putative peptide chain release factor [Pseudomonas entomophila L48] Length = 206 Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 7/94 (7%) Query: 194 SPY-DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SPY ++R++ F P + S+ +T R+SG GGQHVNTTDSAVR Sbjct: 80 SPYRPGHARKNWFFGGARFAPPAPELA------SEIHFETLRSSGPGGQHVNTTDSAVRA 133 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 TH+ +GV V+ Q ERSQH NK A ++ +L + Sbjct: 134 THLASGVSVKVQSERSQHANKRLALLLIGQRLAQ 167 >gi|125528646|gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indica Group] Length = 246 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 C + T++ASG GGQH N +SAVR+ H PTG++ Q ++RSQH N+A A + LR L L Sbjct: 86 CEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQAVEDRSQHMNRASALSRLRT-LIAL 144 Query: 288 ELQK 291 +++K Sbjct: 145 KVRK 148 >gi|256426219|ref|YP_003126872.1| peptide chain release factor-like protein [Chitinophaga pinensis DSM 2588] gi|256041127|gb|ACU64671.1| peptide chain release factor H [Chitinophaga pinensis DSM 2588] Length = 210 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 10/184 (5%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIK 173 N + ++V AG G E ++ M + A + LE G G + SA LLI+ Sbjct: 2 NKSIIQVTAGRGPEECSRVVARVVEMMMKDARGKALDITLLESTKGHLKGTLLSAVLLIQ 61 Query: 174 ------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 +++ +G + V SP+ +R F + V+ D + + E + D Sbjct: 62 TGGISSNKTLEAFIQEWRGTIQWVAQSPFRKYHKRKNWFVGVEVF---DVNKQQEWNLKD 118 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 ++++ RASG GGQHVN ++AVR TH+P+G+ V RSQ +NK L AK Sbjct: 119 VKLESCRASGPGGQHVNKVETAVRGTHLPSGMQVLAMDSRSQLENKQLCLKRLEAKFMAW 178 Query: 288 ELQK 291 ++++ Sbjct: 179 QMEQ 182 >gi|319935093|ref|ZP_08009534.1| hypothetical protein HMPREF9488_00365 [Coprobacillus sp. 29_1] gi|319809988|gb|EFW06365.1| hypothetical protein HMPREF9488_00365 [Coprobacillus sp. 29_1] Length = 195 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 13/206 (6%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++++G G E + ML + K E + + ++ +KS T I +Y Sbjct: 3 IQINSGQGPKECEYACYMLYQELL----KEYSSLEVVSRYVSDQKCLKSITFSIHEDLSY 58 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 +G + + SP+ + +R F I ++ + ++IE E D + +T+R+SG Sbjct: 59 -----LEGTVQWICQSPFRPHHKRRNWFVDI---SIIKEELKIENVE-DIKFETFRSSGK 109 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN +A+R HIPTG+ V +RSQ +NK A+ L K+ ++ + I + Sbjct: 110 GGQNVNKVSTAIRAIHIPTGISVVAMDQRSQLQNKKIAYLRLMEKINQVNSSHHKRIDYL 169 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVK 324 + +I G IR Y ++ +K Sbjct: 170 NWNKHNQIVRGNPIRVYSGMKFKRIK 195 >gi|293413513|ref|ZP_06656162.1| hypothetical protein ECDG_00053 [Escherichia coli B185] gi|291433571|gb|EFF06544.1| hypothetical protein ECDG_00053 [Escherichia coli B185] Length = 122 Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 3/92 (3%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 S + V+ D ++ + +E+ DT R+SG GGQHVN TDSAVR TH+ +G+ V+ Q E Sbjct: 6 SLLVVFTRQDVAVTVLETEAGRYPDTLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSE 65 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 RSQH NK A ++ ++LE Q++E A + Sbjct: 66 RSQHANKRLARLLI---AWKLEQQQQENSAAL 94 >gi|255945923|ref|XP_002563729.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588464|emb|CAP86573.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255] Length = 186 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 50/83 (60%) Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FS + P ++IS++D I + +G GGQ +N T+SAV+I H P+GVVV+CQ Sbjct: 21 FSQTPIVPAKPLPPRLKISDADISISYLKGTGPGGQKINKTNSAVQIIHKPSGVVVKCQA 80 Query: 266 ERSQHKNKAQAWNMLRAKLYELE 288 RSQ +N A ++L K+ LE Sbjct: 81 TRSQSQNAKIARSLLADKIEALE 103 >gi|90019981|ref|YP_525808.1| putative peptide chain release factor [Saccharophagus degradans 2-40] gi|89949581|gb|ABD79596.1| Class I peptide chain release factor [Saccharophagus degradans 2-40] Length = 248 Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 13/169 (7%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI----------HDGEEAGIKS 167 +L++ AG G E LL++ A+ R E +E H S Sbjct: 29 WLQLTAGQGPKECGWVVAQLLKVMLVQAQARGIDVEVVESLAFDKMLRNQHIVMPDAYLS 88 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI-WVYPV--VDDSIEIEIS 224 L I+G A + G H+ S Y +R F + + PV V+ SI + Sbjct: 89 VLLRIEGEQAQLFANEWCGTHKWQGESIYRPKHKRINWFVGVERITPVKPVETSINYQQL 148 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 + ++ ++SGAGGQHVNTT+SAVR TH P+G+ V+ +RSQH+NK Sbjct: 149 QRQLVFESMKSSGAGGQHVNTTNSAVRATHTPSGITVRVDTDRSQHRNK 197 >gi|315283645|ref|ZP_07871778.1| peptide chain release factor 2 [Listeria marthii FSL S4-120] gi|313612712|gb|EFR86721.1| peptide chain release factor 2 [Listeria marthii FSL S4-120] Length = 70 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +K E+A I + EIGWG QIRSYV PY MVKD RT+ E + V+DGDLDDF+ A Sbjct: 5 EKERELAEI-RGEQKEIGWGSQIRSYVFHPYSMVKDHRTSYETGNIQAVMDGDLDDFINA 63 Query: 350 TL 351 L Sbjct: 64 YL 65 >gi|110224569|emb|CAJ98782.1| peptide release factor protein 2 [Francisella novicida] gi|259236249|gb|ACW20342.1| PrfB [Francisella sp. FnSp1] Length = 101 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 65/103 (63%), Gaps = 2/103 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 D +W N A+ L +++ L+N + + I + L L++LA E+D S++QE + + Sbjct: 1 DGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLQTLTELIDLA--EEDESLMQEIAKD 58 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA Sbjct: 59 TQDVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101 >gi|162455289|ref|YP_001617656.1| putative peptide chain release factor homolog protein [Sorangium cellulosum 'So ce 56'] gi|161165871|emb|CAN97176.1| putative peptide chain release factor homolog protein [Sorangium cellulosum 'So ce 56'] Length = 222 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 + +++++ AG G E + + L ++R + +H G+E S +L++G Sbjct: 2 SRSWVQISAGRGPIEVRRFVARLAERMEALCQERGLAVVDVTLH-GDEDAPASVEILVEG 60 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD------------DSIEIE 222 +A L+GE G H LV S + R F+ + ++ D E+E Sbjct: 61 -DARRCLEGELGTHALVERSAARGKAARKRWFAGVAIHAAGADAGAGAGEGVGVDLRELE 119 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 IS RASG GGQHVN T SAVRI H P+G+ V+ ERSQ N + + Sbjct: 120 IS-------ACRASGPGGQHVNKTLSAVRIHHRPSGITVRVADERSQRANVRRGVERIAE 172 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 +L E ++ E S I G +R+Y Sbjct: 173 RLAERAARRVAEGEAARWSEHDRIVRGEPVRTY 205 >gi|326517198|dbj|BAJ99965.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 170 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 28/56 (50%), Positives = 41/56 (73%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 + C + T+++SG GGQH N +SAVR+ H PTG+V Q ++RSQHKN++ A + LR Sbjct: 8 AQCDMGTFKSSGPGGQHRNKRESAVRLRHHPTGIVAQAVEDRSQHKNRSSALSRLR 63 >gi|313622391|gb|EFR92858.1| peptide chain release factor 2 [Listeria innocua FSL J1-023] Length = 55 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/49 (63%), Positives = 35/49 (71%) Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L Sbjct: 2 QKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYL 50 >gi|183600289|ref|ZP_02961782.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827] gi|188020079|gb|EDU58119.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827] Length = 202 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 72/147 (48%), Gaps = 6/147 (4%) Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A+KR+ LE + G+KSA + ++G A + G + SP +R Sbjct: 29 AKKREVMVNTLET-VASKHGLKSALVALEGHGAEELAQLWSGTIQWQCQSPLRPKHKRKN 87 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 W V+ S I ESD + +A G GGQHVN T SAVR H+ TG+ V+ Q Sbjct: 88 -----WFINVIRFSPIQTIEESDIEFEFIKAQGPGGQHVNKTCSAVRAKHLATGISVKVQ 142 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQK 291 ERSQH NK A ++ +L E + Q+ Sbjct: 143 SERSQHANKKLAKQLIYWRLNEYQDQQ 169 >gi|160897900|ref|YP_001563482.1| peptide chain release factor H [Delftia acidovorans SPH-1] gi|160363484|gb|ABX35097.1| peptide chain release factor H [Delftia acidovorans SPH-1] Length = 199 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 77/175 (44%), Gaps = 9/175 (5%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA- 177 +++ A G E + + LR R + LE AG KS L +G Sbjct: 4 IQLTASHGPAECEHAVRLTLRELLRDCAASGIAVDVLE-ETPTPAGYKSVLLRCEGDTGL 62 Query: 178 -YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPVVDDSIEIEISESDCRIDTYRA 235 +G L G + V SP + R F ++ P + EI C+ A Sbjct: 63 LHGTLGAWLGTIQWVFDSPLRPHHPRRNWFVAVQKCEPPRQLPADGEIVFQACK-----A 117 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 SG GGQHVNTTDSAV H+P+G+ V+ ERSQH NK A +L KL L Q Sbjct: 118 SGKGGQHVNTTDSAVHALHVPSGISVKVMSERSQHANKRLARELLALKLARLNAQ 172 >gi|269119386|ref|YP_003307563.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386] gi|268613264|gb|ACZ07632.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386] Length = 206 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 IS+ I T R+SG GGQ+VN ++AVRI HIPTG+ + ++ER+Q+ NK A L Sbjct: 105 ISKKTTEITTMRSSGNGGQNVNKLETAVRIKHIPTGISIVSREERTQYANKKAAVKKLEE 164 Query: 283 KLYELEL--QKREEI 295 KL +E+ QK EE+ Sbjct: 165 KLTNMEIYHQKEEEM 179 >gi|266622646|ref|ZP_06115581.1| putative peptide chain release factor H [Clostridium hathewayi DSM 13479] gi|288865627|gb|EFC97925.1| putative peptide chain release factor H [Clostridium hathewayi DSM 13479] Length = 206 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 4/129 (3%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY +R + + + V E E R +T+++ G GGQ+VN ++ VR Sbjct: 70 SPYRPEHKRKNWYVDVSILETVPRVTE----EKLVRFETFKSGGKGGQNVNKVETGVRAI 125 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG V + RSQH NK A N L L E+ L+ N+ T + G +R Sbjct: 126 HIPTGTAVVSTEARSQHMNKQAALNRLCEILAEMNLESGRREKNLAWMEHTRLERGNPVR 185 Query: 314 SYVLQPYQM 322 Y + + + Sbjct: 186 VYEGRAFHL 194 >gi|226294428|gb|EEH49848.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb18] Length = 315 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 7/102 (6%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------IHDGEEAGIKSATLL 171 LE+ GAGG E+ +AN LLRMYT + R + L+ G E + A + Sbjct: 211 LELRPGAGGDEAGIFANELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVME 270 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 I+ P +Y L+ E GVHR+ R+ +S R HTS S+ + P Sbjct: 271 IETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAGSVAILP 312 >gi|264679478|ref|YP_003279385.1| class I peptide chain release factor [Comamonas testosteroni CNB-2] gi|262209991|gb|ACY34089.1| Class I peptide chain release factor [Comamonas testosteroni CNB-2] Length = 195 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 12/158 (7%) Query: 163 AGIKSATLLIK--GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPVVDDSI 219 AG +S L + P WL G + + SP+ R F ++ P ++ Sbjct: 47 AGYRSVLLRCERETPALREWL----GTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLAM 102 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + EI C+ ASG GGQHVNTTDSAV H+P+G+ V+ ERSQH NK A + Sbjct: 103 DGEIQFQSCK-----ASGKGGQHVNTTDSAVHALHVPSGIAVKVMSERSQHANKRLAREL 157 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 L KL + + + + E+ G+ I+ + L Sbjct: 158 LAIKLAQHNARSEGQAQRLRSQQHWEVERGQAIKVFRL 195 >gi|262196479|ref|YP_003267688.1| class I peptide chain release factor [Haliangium ochraceum DSM 14365] gi|262079826|gb|ACY15795.1| Class I peptide chain release factor [Haliangium ochraceum DSM 14365] Length = 196 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 2/132 (1%) Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + A+ H +E+ +S + G + L G G H LV S R F+ + Sbjct: 21 LRIGAVSTHGNDES-PRSVAFTVSGAVSAA-LAGFVGTHVLVARSSRRGRRARKRWFAGV 78 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 ++ + EI + + RA G GGQHVNTTDSAVR+ H +G+ V+ ERSQ Sbjct: 79 SIHAQQAATAVAEIRPDEVEVTASRAGGPGGQHVNTTDSAVRVRHKASGISVRVAGERSQ 138 Query: 270 HKNKAQAWNMLR 281 H+N++ A LR Sbjct: 139 HRNRSVALTRLR 150 >gi|207111525|ref|ZP_03245687.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1] Length = 45 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 28/35 (80%), Positives = 31/35 (88%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 G GGQHVN T+SAVRITH PTG+VVQCQ +RSQHK Sbjct: 11 GRGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHK 45 >gi|297734721|emb|CBI16955.3| unnamed protein product [Vitis vinifera] Length = 224 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 25/47 (53%), Positives = 37/47 (78%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 C + T+++SG GGQH N +SAVR+ H+PTG++ Q ++RSQHKN+A Sbjct: 64 CEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 110 >gi|221065979|ref|ZP_03542084.1| peptide chain release factor H [Comamonas testosteroni KF-1] gi|220711002|gb|EED66370.1| peptide chain release factor H [Comamonas testosteroni KF-1] Length = 195 Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 12/158 (7%) Query: 163 AGIKSATLLIK--GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPVVDDSI 219 AG +S L + P WL G + + SP+ R F ++ P ++ Sbjct: 47 AGYRSVLLRCERETPALREWL----GTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLTM 102 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + EI C+ ASG GGQHVNTTDSAV H+P+G+ V+ ERSQH NK A + Sbjct: 103 DGEIQFQSCK-----ASGKGGQHVNTTDSAVHALHVPSGMAVKVMSERSQHANKQLAREL 157 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 L KL + + + + E+ G+ ++ + L Sbjct: 158 LAIKLARHNARSQGQAQRLRSQQHREVERGQAVKVFRL 195 >gi|299530560|ref|ZP_07043980.1| Class I peptide chain release factor [Comamonas testosteroni S44] gi|298721536|gb|EFI62473.1| Class I peptide chain release factor [Comamonas testosteroni S44] Length = 195 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 12/127 (9%) Query: 163 AGIKSATLLIK--GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW-VYPVVDDSI 219 AG +S L + P WL G + + SP+ R F ++ P ++ Sbjct: 47 AGCRSVLLRCERETPALREWL----GTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLAM 102 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + EI C+ ASG GGQHVNTTDSAV H+P+G+ V+ ERSQH NK A + Sbjct: 103 DGEIQFQSCK-----ASGKGGQHVNTTDSAVHALHVPSGIAVKVMSERSQHANKRLAREL 157 Query: 280 LRAKLYE 286 L KL + Sbjct: 158 LAIKLAQ 164 >gi|226294427|gb|EEH49847.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb18] Length = 153 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 14/83 (16%) Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ---------KR 292 HVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW +LRA++ + + +R Sbjct: 9 HVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQRRREAREEEMVKLRR 68 Query: 293 EEIANIGESSKTEIGWGRQIRSY 315 + +G ++G G +IR+Y Sbjct: 69 GAMGGVG-----KMGRGDKIRTY 86 >gi|326789649|ref|YP_004307470.1| peptide chain release factor H [Clostridium lentocellum DSM 5427] gi|326540413|gb|ADZ82272.1| peptide chain release factor H [Clostridium lentocellum DSM 5427] Length = 195 Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 12/91 (13%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEI----SESDCRIDTYRASGAGGQHVNTTDSA 249 SPY +N +R + +D SI E+ +E R +T+R+ G GGQHVN ++ Sbjct: 70 SPYRANCKRKNWY--------IDVSILEEVKKVSTEEIIRFETFRSGGKGGQHVNKVETG 121 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 VR H+PTG+ V + RSQH NK A N L Sbjct: 122 VRAIHMPTGIAVVSTEARSQHMNKQIAMNRL 152 >gi|226320894|ref|ZP_03796445.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805] gi|226233666|gb|EEH32396.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805] Length = 86 Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 34/82 (41%), Positives = 50/82 (60%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E DS + +E+ AG GG E+ +AN L MY +++EK+K+KTE + ++ E G K Sbjct: 5 ENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIF 64 Query: 171 LIKGPNAYGWLKGEQGVHRLVR 192 IKG + + LK E GVHR+ R Sbjct: 65 EIKGKDVFKKLKYESGVHRVQR 86 >gi|259235601|gb|ACW20312.1| peptide release factor protein 2 [Francisella cf. novicida 3523] Length = 111 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 72/111 (64%), Gaps = 2/111 (1%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 ED +W N A+ L +++ L+N + + I + L LLELA E++ +++QE + Sbjct: 2 EDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETLSELLELAEEDE--TLMQEIAK 59 Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY Sbjct: 60 DTQDVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMY 110 >gi|160935130|ref|ZP_02082513.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC BAA-613] gi|158441861|gb|EDP19558.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC BAA-613] Length = 198 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY RR + + + D + E R +T+R+ G GGQHVN ++ VR Sbjct: 70 SPYRPGHRRKNWYVDVSIL----DQVPRISEERMVRFETFRSGGKGGQHVNKVETGVRAI 125 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG V Q RSQH NK A + L + L E+ + +++ ++ + G +R Sbjct: 126 HIPTGTAVVSTQARSQHMNKQIAMDRLCSILAEMNARNQQKEKSLAWMEHARLERGNPVR 185 Query: 314 SY 315 Y Sbjct: 186 IY 187 >gi|281356039|ref|ZP_06242532.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548] gi|281317408|gb|EFB01429.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548] Length = 204 Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 5/168 (2%) Query: 118 YLEVHAGAGGTESQDW-ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +LE+ +G G E + A +++R+ + + +F+ AL + E++ +KS ++G Sbjct: 5 FLEISSGQGPEECELLVAKLMVRLTSELRREVRFREVALN-GNREKSLVKSVLFELEGEG 63 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A + G + + SP+ + +R ++ I ++ + E+ +D R+S Sbjct: 64 AAVSVAPWLGTIQWIAASPFRPHHKRRNWYAGIRLF---EAEPELAFDPNDVEFSASRSS 120 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 G GGQHVNT+++ ++ H PTG +ERSQ +N+ A L AK+ Sbjct: 121 GPGGQHVNTSNTRIQAFHRPTGQCAVAGEERSQLRNRELALARLAAKV 168 >gi|317490594|ref|ZP_07949067.1| RF-1 domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325831509|ref|ZP_08164763.1| peptidyl-tRNA hydrolase domain protein [Eggerthella sp. HGA1] gi|316910296|gb|EFV31932.1| RF-1 domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486763|gb|EGC89211.1| peptidyl-tRNA hydrolase domain protein [Eggerthella sp. HGA1] Length = 124 Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 42/66 (63%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + +E DC + +RASG GGQ VNTTDSAVR+TH+P+G+ ++ RSQ +N+ Sbjct: 17 MSLEDIARDCDVQAFRASGPGGQCVNTTDSAVRMTHVPSGMTATSRESRSQFRNRQLCLQ 76 Query: 279 MLRAKL 284 LR + Sbjct: 77 KLRDRF 82 >gi|225459890|ref|XP_002263666.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 507 Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 25/47 (53%), Positives = 37/47 (78%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 C + T+++SG GGQH N +SAVR+ H+PTG++ Q ++RSQHKN+A Sbjct: 64 CEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 110 >gi|328852101|gb|EGG01250.1| hypothetical protein MELLADRAFT_92621 [Melampsora larici-populina 98AG31] Length = 174 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 4/97 (4%) Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV----VDDSI 219 G++ A L IKG + Y ++ E GVH + + + S HTS +++ V D Sbjct: 9 GLREAPLEIKGEDVYKRMRWEAGVHCVQCVPVMQNTSLVHTSTAAVIVLAFDPGNQDRQE 68 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 E + D R +T R+ G GGQHVN T+S VR+TH+P Sbjct: 69 EALFEDKDVRTETMRSQGVGGQHVNKTESVVRLTHVP 105 >gi|167590758|ref|ZP_02383146.1| peptide chain release factor-like protein [Burkholderia ubonensis Bu] Length = 177 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNA 177 L++ + G E Q A L+ A+ + L++ GE G ++S L + G +A Sbjct: 3 LQISSAHGPAECQLAAAKALQRLQAEADACRVALTVLDLQPGERPGTVRSVLLDLDGADA 62 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 G + + SPY R W V + + + + + RA G Sbjct: 63 AALADRWAGTLQWICASPYRLRHPRKN-----WFVGVTRCADAPPLPDGAVKFEAMRARG 117 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 GGQHVN T SA+R TH+ TG V+ + ERSQH NK A +L A+L E Sbjct: 118 PGGQHVNKTSSAIRATHLATGTSVRVESERSQHANKRLALQLLHARLRE 166 >gi|319937084|ref|ZP_08011493.1| hypothetical protein HMPREF9488_02327 [Coprobacillus sp. 29_1] gi|319807862|gb|EFW04447.1| hypothetical protein HMPREF9488_02327 [Coprobacillus sp. 29_1] Length = 197 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 4/122 (3%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY + +R F + ++ + I+I+ + +D R + +R+SG GGQ+VN +A+R Sbjct: 71 SPYRPHHKRKNWFIDV---SIIKEDIKID-NTNDIRYEVFRSSGKGGQNVNKVSTAIRAI 126 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+V +RSQ +NK A+ L K+ E + I + +I G IR Sbjct: 127 HIPTGIVTVSMDQRSQLQNKKIAYLRLLEKIDETSSSINKSIHYLNWVKHNQIERGNPIR 186 Query: 314 SY 315 Y Sbjct: 187 VY 188 >gi|227357000|ref|ZP_03841372.1| peptide chain release factor [Proteus mirabilis ATCC 29906] gi|227162878|gb|EEI47837.1| peptide chain release factor [Proteus mirabilis ATCC 29906] Length = 203 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/59 (52%), Positives = 41/59 (69%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 EI +++ +T RA+G GGQHVN T SAVR THI TG+ V+ Q +RSQH NK A ++ Sbjct: 100 EIQDTEILFETMRANGPGGQHVNKTSSAVRATHIATGISVKIQSQRSQHANKKLAKQLI 158 >gi|330951102|gb|EGH51362.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7] Length = 111 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 8/103 (7%) Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWG--- 309 H+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q+ AN I K +G G Sbjct: 1 HLPSGIVVECQEERSQHKNRARAMSWLSAKLND---QQTSAAANAIASERKLLVGSGDRS 57 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ S +VL G +D ++ LA Sbjct: 58 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLA 99 >gi|207111206|ref|ZP_03245368.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1] Length = 55 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/52 (55%), Positives = 36/52 (69%) Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 3 KDEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 54 >gi|332030644|gb|EGI70332.1| Uncharacterized protein C12orf65-like protein [Acromyrmex echinatior] Length = 163 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 5/120 (4%) Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKS +K PN+ +L L + +S R+ SF Y V EI++ Sbjct: 3 IKSVLTCLKVPNSIFFLVSRNEFLLLGIVFNSESIQVRNKSFKRYLDYSNVPKLDEIDLE 62 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E R SG GGQ N T++AV + H PTG+VV+C + RSQ NK +A +L KL Sbjct: 63 E-----QFIRGSGPGGQATNKTNNAVLLKHKPTGLVVKCHETRSQWDNKKRAREILVTKL 117 >gi|171914371|ref|ZP_02929841.1| Class I peptide chain release factor [Verrucomicrobium spinosum DSM 4136] Length = 141 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 4/81 (4%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 +++ I E D R +GAGGQ +N T S V +TH+PTG+ V+CQ+ERSQ N+ A Sbjct: 20 LKLGIREEDLEETFIRGTGAGGQKINKTSSTVVLTHVPTGLEVRCQRERSQSLNRVVARE 79 Query: 279 MLRAKLYE----LELQKREEI 295 L +KL E ++L++R E+ Sbjct: 80 ELCSKLEERLAAVKLERRNEV 100 >gi|203459047|ref|YP_002224203.1| gp204 [Mycobacterium phage ScottMcG] gi|197312494|gb|ACH62849.1| gp204 [Mycobacterium phage ScottMcG] Length = 118 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ++ +DC ++T R SG GGQ+ N D+AVRI H P+G V + Q+ERSQ +NK A+ + Sbjct: 7 LSVTLADCVVETKRGSGKGGQNRNKRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM 66 Query: 281 RAKLYELELQKREEIAN 297 A+ + +L + ++AN Sbjct: 67 -AESSKFQLWLKRQVAN 82 >gi|281416112|ref|YP_003347848.1| gp198 [Mycobacterium phage ET08] gi|255927791|gb|ACU41412.1| gp198 [Mycobacterium phage ET08] gi|255928079|gb|ACU41698.1| gp203 [Mycobacterium phage LRRHood] Length = 136 Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ++ +DC ++T R G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK A+ + Sbjct: 25 LSVTLADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM 84 Query: 281 RAKLYELELQKREEIAN 297 A+ + +L + ++AN Sbjct: 85 -AESSKFQLWLKRQVAN 100 >gi|146343293|ref|YP_001208341.1| class I peptide chain release factor domain-containing protein [Bradyrhizobium sp. ORS278] gi|146196099|emb|CAL80126.1| putative Class I peptide chain release factor domain protein [Bradyrhizobium sp. ORS278] Length = 207 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 3/67 (4%) Query: 210 WVYPVVDDSIEIEI---SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 W +VD + ++ S SD R +++RA G GGQH N T+SAVR H+P+G+ + Sbjct: 90 WFVGIVDLPLPAQLPMLSTSDVRFESFRAGGPGGQHQNKTESAVRAVHLPSGLTAIARDG 149 Query: 267 RSQHKNK 273 RSQH NK Sbjct: 150 RSQHGNK 156 >gi|29566685|ref|NP_818251.1| gp200 [Mycobacterium phage Bxz1] gi|109393384|ref|YP_656182.1| gp202 [Mycobacterium phage Catera] gi|29425410|gb|AAN16834.1| gp200 [Mycobacterium phage Bxz1] gi|91981206|gb|ABE67921.1| gp202 [Mycobacterium phage Catera] Length = 113 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ++ +DC ++T R G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK A+ + Sbjct: 2 LSVTLADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM 61 Query: 281 RAKLYELELQKREEIAN 297 A+ + +L + ++AN Sbjct: 62 -AESSKFQLWLKRQVAN 77 >gi|203460691|ref|YP_002224425.1| gp204 [Mycobacterium phage Spud] gi|197312272|gb|ACH62628.1| gp204 [Mycobacterium phage Spud] Length = 113 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ++ +DC ++T R G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK A+ + Sbjct: 2 LSVTLADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM 61 Query: 281 RAKLYELELQKREEIAN 297 A+ + +L + ++AN Sbjct: 62 -AESSKFQLWLKRQVAN 77 >gi|331001770|ref|ZP_08325292.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str. F0167] gi|330412744|gb|EGG92127.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str. F0167] Length = 200 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 1/122 (0%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 S Y +R F + + P + +E SE+D RI+ + A+G GGQ+VN ++ VR+ Sbjct: 70 SKYRPWHKRKNWFIDVSIIPETTE-MEENFSENDLRIEKFHANGPGGQNVNKVETGVRVI 128 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIP+G+ V +ERSQ NK A L L ++ + N S +EI G +R Sbjct: 129 HIPSGIRVSSTRERSQLLNKKDAIRKLAIVLKSRNDFEKVKSRNNAWSKHSEIVRGNPVR 188 Query: 314 SY 315 Y Sbjct: 189 IY 190 >gi|296775661|gb|ADH42938.1| protein chain release factor A [uncultured SAR11 cluster alpha proteobacterium H17925_23J24] Length = 214 Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 45/89 (50%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +E+ AG GG E+ + L RMY + K+ +K E + I E G K + Sbjct: 107 DEKNTIVEIRAGTGGLEATLFVADLFRMYEKVCSKKGWKIEIISISKSEAKGFKEVIFSV 166 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 G N Y +LK E GVHR+ R+ ++ R Sbjct: 167 IGENIYSYLKYESGVHRVQRVPTTEAQGR 195 >gi|224071118|ref|XP_002189696.1| PREDICTED: similar to CL065 protein [Taeniopygia guttata] Length = 228 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 41/65 (63%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EISE+D R G GGQ N T++ V + HIP+G+VV+C Q RS KN+ A +L Sbjct: 117 LEISEADLEEQFVRGDGPGGQATNKTNNCVVLKHIPSGIVVKCHQTRSLEKNRKIAREIL 176 Query: 281 RAKLY 285 + K+Y Sbjct: 177 QEKVY 181 >gi|169838607|ref|ZP_02871795.1| peptide chain release factor 2 [candidate division TM7 single-cell isolate TM7a] Length = 61 Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 42/61 (68%) Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GGT++QD+A ML RMY R+AEK + + +E G+EAG+K++ + I GP AYG L Sbjct: 1 GVGGTDAQDFAEMLERMYLRFAEKSSLEAKIVERSSGDEAGLKTSVIEINGPYAYGRLHS 60 Query: 184 E 184 E Sbjct: 61 E 61 >gi|225390312|ref|ZP_03760036.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme DSM 15981] gi|225043636|gb|EEG53882.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme DSM 15981] Length = 196 Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 4/80 (5%) Query: 215 VDDSIEIEIS----ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 +D SI EI E R +T+R+ G GGQ+VN ++ VR+ HIPTG+ V + RSQH Sbjct: 83 IDVSILEEIPRTSKEMQVRFETFRSGGKGGQNVNKVETGVRVVHIPTGIAVVSTEARSQH 142 Query: 271 KNKAQAWNMLRAKLYELELQ 290 NK A N L L + +LQ Sbjct: 143 MNKQIALNRLCDILADRDLQ 162 >gi|197287314|ref|YP_002153186.1| peptide chain release factor [Proteus mirabilis HI4320] gi|194684801|emb|CAR46873.1| probable peptide chain release factor [Proteus mirabilis HI4320] Length = 203 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 45/76 (59%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 EI +++ +T RA+G GGQHVN T SAVR THI TG+ V+ Q +R QH NK A ++ Sbjct: 100 EIQDTEILFETMRANGPGGQHVNKTSSAVRATHIATGISVKIQSQRIQHANKKLAKQLIA 159 Query: 282 AKLYELELQKREEIAN 297 L Q++ N Sbjct: 160 WHLTHYLSQQQASFNN 175 >gi|149197057|ref|ZP_01874109.1| peptide chain release factor-like protein [Lentisphaera araneosa HTCC2155] gi|149139603|gb|EDM28004.1| peptide chain release factor-like protein [Lentisphaera araneosa HTCC2155] Length = 203 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 8/164 (4%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKG 174 +A+++ +G G E + + +++ R AE + E ++ G E+ +S + ++G Sbjct: 2 NAWIQFSSGQGPRECERVLWHIFKIFCREAEDENIQCELIKAEKGSEKNSFRSLLISLEG 61 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF--SSIWVYPVVDDSIEIEISESDCRIDT 232 K +G SP+ + +R F +S + P + E+ S + + Sbjct: 62 NQLETLRKNWEGSLLWRAPSPFRPHHKRRNWFVQASFFAIPA-----KAELDLSQIKFEA 116 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 R SG GGQHVN +A+R + P + + C +ERSQ++NK A Sbjct: 117 QRGSGPGGQHVNKCATAIRAYYAPLQLSILCNEERSQYRNKMLA 160 >gi|330941932|ref|XP_003306099.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1] gi|311316572|gb|EFQ85807.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1] Length = 205 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 17/106 (16%) Query: 203 HTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 HTS +P++ S+ + + +SD + + SG GGQ +N T SAV++ HIPTG+V Sbjct: 9 HTS------HPLLSKSLPPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIV 62 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 V+ Q RS+ N+ A +L+ ++ EL+L GE ++T + Sbjct: 63 VKYQDTRSREINRKMARRILQDRIEELQL---------GEDARTRV 99 >gi|204305830|ref|YP_002224647.1| gp203 [Mycobacterium phage Cali] gi|197312803|gb|ACH63156.1| gp203 [Mycobacterium phage Cali] Length = 110 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +DC ++T R G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK A+ + A+ Sbjct: 4 ADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRM-AESS 62 Query: 286 ELELQKREEIAN 297 + +L + ++AN Sbjct: 63 KFQLWLKRQVAN 74 >gi|225631245|ref|ZP_03787932.1| peptide chain release factor 1 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591056|gb|EEH12251.1| peptide chain release factor 1 [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 178 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 45/78 (57%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 L E DS +A LE+ AG GG E+ +A ML RMY ++AE+R +K E + I + G K Sbjct: 101 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 160 Query: 167 SATLLIKGPNAYGWLKGE 184 A+ LI G + LK E Sbjct: 161 EASALINGTEVFARLKFE 178 >gi|84999208|ref|XP_954325.1| peptide chain release factor 1, mitochondrial precursor [Theileria annulata] gi|65305323|emb|CAI73648.1| peptide chain release factor 1, mitochondrial precursor, putative [Theileria annulata] Length = 194 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 15/97 (15%) Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-------------EIEISESDCRI 230 E GVH++ R+ + + R H+S +++ V P D + E+E++ SD Sbjct: 76 EGGVHQVKRVPITEKSGRMHSSTATVAVLP--SDMVKGNDMNNFDKLVEEVELNPSDIEW 133 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 T RASG GGQ+VN +++V + H PTG+ ++C +ER Sbjct: 134 KTCRASGPGGQNVNKVETSVSLYHKPTGIKIECSEER 170 >gi|149245034|ref|XP_001527051.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449445|gb|EDK43701.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 172 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 39/54 (72%) Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 SG GGQ +N T+S V++TH PTG+VV CQ+ RSQ +N+ +A +L KL +++ Sbjct: 45 GSGPGGQKINKTNSKVQLTHKPTGIVVSCQESRSQDQNRKKAREILALKLEDIQ 98 >gi|39943940|ref|XP_361507.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|58257471|gb|AAW69357.1| peptide chain release factor-like protein [Magnaporthe grisea] gi|145014700|gb|EDJ99268.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 195 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 14/94 (14%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 E EI ES + SG GGQ +N T+SAV++ HIPTG+VV+CQ+ RS+ +N+ A + Sbjct: 67 ETEIEES-----FLKGSGPGGQKINKTNSAVQLKHIPTGIVVKCQETRSRDQNRKIARQL 121 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 L +L +L N G+ S++ I +++ Sbjct: 122 LATRLDDL---------NNGDQSRSAIVGAHKVK 146 >gi|189196084|ref|XP_001934380.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980259|gb|EDU46885.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 175 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 8/89 (8%) Query: 203 HTSFSSIWVYPVVDDSIE--IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 HTS +P++ S+ + + +SD + + SG GGQ +N T SAV++ HIPTG+V Sbjct: 14 HTS------HPLLSKSLPPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIV 67 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELEL 289 V+ Q RS+ N+ A +L+ ++ EL+L Sbjct: 68 VKYQDTRSREINRKMARRILQDRIEELQL 96 >gi|190346160|gb|EDK38179.2| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC 6260] Length = 171 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/52 (51%), Positives = 37/52 (71%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 G GGQ +N ++S V++THIPTG VV CQ RSQ +N+ +A +L KL EL+ Sbjct: 52 GPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKAREILALKLEELQ 103 >gi|146421313|ref|XP_001486606.1| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC 6260] Length = 171 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/52 (51%), Positives = 37/52 (71%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 G GGQ +N ++S V++THIPTG VV CQ RSQ +N+ +A +L KL EL+ Sbjct: 52 GPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKAREILALKLEELQ 103 >gi|39995653|ref|NP_951604.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter sulfurreducens PCA] gi|39982416|gb|AAR33877.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens PCA] gi|298504676|gb|ADI83399.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens KN400] Length = 126 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 9/88 (10%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D E+ +SE+D R+SGAGGQHVN T + V+I H PTG+ V+C ++RSQ N+ Sbjct: 18 DKMAELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRF- 76 Query: 276 AWNMLRAKLYELELQKREEIANIGESSK 303 L E+ +R E N GES + Sbjct: 77 --------LARREILERIERLNKGESPR 96 >gi|323486906|ref|ZP_08092222.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum WAL-14163] gi|323691951|ref|ZP_08106201.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673] gi|323399769|gb|EGA92151.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum WAL-14163] gi|323504009|gb|EGB19821.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673] Length = 197 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 4/87 (4%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SPY +R + + + +++ E R +T+R+ G GGQ+VN ++ VR+ Sbjct: 70 SPYRPKHKRKNWYIDVSIL----ENMPKLTQELKLRFETFRSGGKGGQNVNKVETGVRVI 125 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNML 280 HIPTG+ V + RSQH NK A N L Sbjct: 126 HIPTGISVVSTEARSQHMNKKLAVNRL 152 >gi|149369402|ref|ZP_01889254.1| putative peptide chain release factor [unidentified eubacterium SCB49] gi|149356829|gb|EDM45384.1| putative peptide chain release factor [unidentified eubacterium SCB49] Length = 238 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 4/171 (2%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIK 173 N +++ AG G E L+ + E + +G E I+S TL +K Sbjct: 9 NTQIIQITAGRGPAECCWVVAQTLKFLIKELTATNITYEIISKENGFENRTIQSVTLQLK 68 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G +L G + V S + + +R F + + V+++ ++E+ ++ Sbjct: 69 GKQLDTFLANWLGTIQWVGTSTFRKHHKRKNWFIACFK---VEETNKLELVLNEVSFQAM 125 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R+SG GGQHVN SA+R TH +G+ V RSQH+N+ A L+ K+ Sbjct: 126 RSSGPGGQHVNKVSSAIRATHKKSGLQVVAMDSRSQHQNRKIAIKRLQEKV 176 >gi|148252694|ref|YP_001237279.1| class I peptide chain release factor domain-containing protein [Bradyrhizobium sp. BTAi1] gi|146404867|gb|ABQ33373.1| putative Class I peptide chain release factor domain protein [Bradyrhizobium sp. BTAi1] Length = 207 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 3/66 (4%) Query: 210 WVYPVVDDSIEIEISE---SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 W +VD + ++ + +D R +++RA G GGQH N T+SAVR H+PTG+ + Sbjct: 90 WFVGIVDLPLPHQVPDLAAADVRCESFRAGGPGGQHQNKTESAVRAIHLPTGLTAIARDG 149 Query: 267 RSQHKN 272 RSQH+N Sbjct: 150 RSQHRN 155 >gi|224109198|ref|XP_002315120.1| predicted protein [Populus trichocarpa] gi|222864160|gb|EEF01291.1| predicted protein [Populus trichocarpa] Length = 59 Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 27/48 (56%), Positives = 35/48 (72%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 ++SI+ E+ E D I T RASG GGQ+VN ++A RITH PTGV V+C Sbjct: 6 EESIDAELPEEDLEITTSRASGRGGQNVNKVETAARITHTPTGVPVRC 53 >gi|170049046|ref|XP_001853980.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167870988|gb|EDS34371.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 142 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 49/91 (53%) Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S+S R + F+ +D S + + D R SG GGQ V T++ V +TH PT Sbjct: 8 SSSVRQSIFAITRFKTTIDVSKVPVLRDEDLEEAFVRGSGPGGQSVAKTNNKVVLTHKPT 67 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 G+V+QC RS KN+ +A +L KL ELE Sbjct: 68 GIVIQCHSSRSLFKNREEARRLLILKLDELE 98 >gi|157131147|ref|XP_001662139.1| hypothetical protein AaeL_AAEL012009 [Aedes aegypti] gi|157137107|ref|XP_001663890.1| hypothetical protein AaeL_AAEL013711 [Aedes aegypti] gi|108869799|gb|EAT34024.1| conserved hypothetical protein [Aedes aegypti] gi|108871632|gb|EAT35857.1| conserved hypothetical protein [Aedes aegypti] Length = 142 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/75 (42%), Positives = 43/75 (57%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D S + + D R SG GGQ V T++ V +TH PTG+V+QC RS KN+ Sbjct: 24 TIDTSKVPALRDDDLEETFVRGSGPGGQAVAKTNNKVVLTHKPTGIVIQCHSSRSLFKNR 83 Query: 274 AQAWNMLRAKLYELE 288 +A +L AKL ELE Sbjct: 84 EEARRLLVAKLDELE 98 >gi|145250303|ref|XP_001396665.1| peptidyl-tRNA hydrolase domain protein [Aspergillus niger CBS 513.88] gi|134082184|emb|CAL00939.1| unnamed protein product [Aspergillus niger] Length = 198 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 8/107 (7%) Query: 189 RLVRISPY------DSNSRRHTSFSSIWVYPVVDDSIE--IEISESDCRIDTYRASGAGG 240 R + ++PY SN F ++ + D ++ ++I ++D + + +G GG Sbjct: 3 RPLHLTPYITRPFLKSNYLPTPRFFTLSALSLADKALPPRLKIQDADVTVSYLKGTGPGG 62 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 Q +N T+SAV+I H PTGVVV+ Q RS+ +N+ A +L K+ EL Sbjct: 63 QKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIARQLLADKVEEL 109 >gi|315053701|ref|XP_003176225.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893] gi|311338071|gb|EFQ97273.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893] Length = 192 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 12/88 (13%) Query: 213 PVVDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DDS EI+ TY + SG GGQ +N T SAV++ HIPT VV+CQ RSQ + Sbjct: 47 PTIDDS---EIT------GTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQ 97 Query: 272 NKAQAWNMLRAKLYELEL--QKREEIAN 297 N+ A +L K+ LE Q R I N Sbjct: 98 NRKIAKRILAEKIELLEKGEQSRAAIVN 125 >gi|283780964|ref|YP_003371719.1| peptide chain release factor I [Pirellula staleyi DSM 6068] gi|283439417|gb|ADB17859.1| Class I peptide chain release factor [Pirellula staleyi DSM 6068] Length = 191 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 46/81 (56%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 ++ +E +C+I+ R G GGQH N ++AV ITH PTG+ Q + RSQ N+ +A+ Sbjct: 30 ALPLEKLARECQIEFTRRGGPGGQHRNKVETAVVITHQPTGLAGQASETRSQDHNREEAY 89 Query: 278 NMLRAKLYELELQKREEIANI 298 LR +L +RE A I Sbjct: 90 QRLRIELATGLRTRREPTAPI 110 >gi|212526542|ref|XP_002143428.1| peptidyl-tRNA hydrolase domain protein [Penicillium marneffei ATCC 18224] gi|210072826|gb|EEA26913.1| peptidyl-tRNA hydrolase domain protein [Penicillium marneffei ATCC 18224] Length = 177 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 9/138 (6%) Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 W K ++ R S SFS+ V ++ + D + +G G Sbjct: 5 WSKAPNAIYTACR-------STNRPSFSTCPALAVKQLPPRPKLDDKDITGSYLKGTGPG 57 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL--QKREEIAN 297 GQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L AK+ LE Q RE I N Sbjct: 58 GQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNQKIAKEILAAKVEVLEKGEQSREAIKN 117 Query: 298 IGESSKTEIGWGRQIRSY 315 + + ++ R Y Sbjct: 118 ALKKKRKASSMKKKRRKY 135 >gi|110224565|emb|CAJ98780.1| peptide release factor protein 2 [Francisella tularensis subsp. mediasiatica] Length = 101 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 2/103 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 D +W N A+ L +++ L+N + + I L LLEL E D S++QE + + Sbjct: 1 DGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKE--DESLMQEIAKD 58 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA Sbjct: 59 TQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101 >gi|260947746|ref|XP_002618170.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720] gi|238848042|gb|EEQ37506.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720] Length = 180 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 26/52 (50%), Positives = 37/52 (71%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 G GGQ +N ++S V++TH PTG+VV CQ RSQ +N+ +A +L KL EL+ Sbjct: 64 GPGGQKINKSNSKVQLTHKPTGIVVTCQYSRSQEQNRKKAREILALKLEELQ 115 >gi|242781170|ref|XP_002479747.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC 10500] gi|218719894|gb|EED19313.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC 10500] Length = 174 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 2/112 (1%) Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FS+ V ++ + D + +G GGQ +N T+SAV++ H PTG+VV+ Q Sbjct: 26 FSTYPARAVKQLPPRPKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQA 85 Query: 266 ERSQHKNKAQAWNMLRAKLYELEL--QKREEIANIGESSKTEIGWGRQIRSY 315 RS+ +N+ A +L AK+ ELE Q RE I N + + ++ R Y Sbjct: 86 TRSRSQNQKIAREILAAKVEELEKGEQSREAIKNALKRKRKASSMKKKRRKY 137 >gi|291239031|ref|XP_002739431.1| PREDICTED: C12orf65 homolog [Saccoglossus kowalevskii] Length = 160 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 39/64 (60%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI+E + R SG GGQ N T + V + HIP+G+ V+C Q RSQ KN+ + +L Sbjct: 49 VEINEDELDEQFVRGSGPGGQATNKTSNCVVLKHIPSGITVKCHQTRSQSKNRELSRRIL 108 Query: 281 RAKL 284 R KL Sbjct: 109 REKL 112 >gi|327309086|ref|XP_003239234.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892] gi|326459490|gb|EGD84943.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892] Length = 190 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 12/88 (13%) Query: 213 PVVDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DDS EI+ TY + SG GGQ +N T SAV++ HIPT VV+CQ RSQ + Sbjct: 47 PTIDDS---EIT------GTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQ 97 Query: 272 NKAQAWNMLRAKLYELEL--QKREEIAN 297 N+ A +L K+ LE Q R I N Sbjct: 98 NRKIAKRILAEKIELLEKGEQSRAAILN 125 >gi|298249625|ref|ZP_06973429.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM 44963] gi|297547629|gb|EFH81496.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM 44963] Length = 118 Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 5/77 (6%) Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP+ DS+E DC I+ + A G GGQH N +S VR+ H P+G VV + RSQ+ Sbjct: 6 YPIDRDSLE-----RDCTIEFFIAGGPGGQHRNKVESGVRLIHRPSGQVVTATERRSQYA 60 Query: 272 NKAQAWNMLRAKLYELE 288 N+ A+ + A+L L+ Sbjct: 61 NREMAFERMAARLERLQ 77 >gi|156064005|ref|XP_001597924.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980] gi|154690872|gb|EDN90610.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980 UF-70] Length = 201 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 43/67 (64%) Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 SG GGQ +N T SAV++ HIPTG+V++ Q RS+ +N+ A ML ++ LE K Sbjct: 71 GSGPGGQKINKTSSAVQLKHIPTGMVLKVQATRSRTQNRKIARQMLAERVELLEKGKESR 130 Query: 295 IANIGES 301 +A +GE+ Sbjct: 131 VAIVGET 137 >gi|108758265|ref|YP_629628.1| peptidyl-tRNA hydrolase domain-containing protein [Myxococcus xanthus DK 1622] gi|108462145|gb|ABF87330.1| peptidyl-tRNA hydrolase domain protein [Myxococcus xanthus DK 1622] Length = 129 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 C +D + ASG GGQH NTT S VR+TH PT + V + RSQ +NK A LR L L Sbjct: 30 CEVDYFIASGPGGQHRNTTASGVRLTHAPTELSVSATERRSQVQNKGVALERLREGLKVL 89 Query: 288 ELQKREEIANIGESSKTEIGWGRQ 311 + + ++K G R+ Sbjct: 90 TF-----VPKVRRATKPTAGSKRR 108 >gi|68489326|ref|XP_711504.1| hypothetical protein CaO19.12943 [Candida albicans SC5314] gi|68489375|ref|XP_711480.1| hypothetical protein CaO19.5488 [Candida albicans SC5314] gi|46432785|gb|EAK92252.1| hypothetical protein CaO19.5488 [Candida albicans SC5314] gi|46432811|gb|EAK92277.1| hypothetical protein CaO19.12943 [Candida albicans SC5314] gi|238882388|gb|EEQ46026.1| conserved hypothetical protein [Candida albicans WO-1] Length = 171 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/48 (56%), Positives = 34/48 (70%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 G GGQ +N T+S V++THIPTG+VV CQ RSQ +N+A A L KL Sbjct: 50 GPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKL 97 >gi|326469360|gb|EGD93369.1| peptidyl-tRNA hydrolase [Trichophyton tonsurans CBS 112818] gi|326483473|gb|EGE07483.1| hypothetical protein TEQG_06610 [Trichophyton equinum CBS 127.97] Length = 191 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 2/77 (2%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I ES+ + SG GGQ +N T SAV++ HIPT VV+CQ RSQ +N+ A +L Sbjct: 49 IDESEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRILAE 108 Query: 283 KLYELEL--QKREEIAN 297 K+ LE Q R I N Sbjct: 109 KIELLEKGEQSRAAIVN 125 >gi|169840413|ref|ZP_02873601.1| peptide chain release factor 1 [candidate division TM7 single-cell isolate TM7a] Length = 56 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/44 (63%), Positives = 37/44 (84%) Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +VNTTDSAVRITH+PTG+VV Q E+SQ KNK +A ++LR++L Sbjct: 13 NVNTTDSAVRITHLPTGLVVTNQDEKSQIKNKEKALSVLRSRLL 56 >gi|289178305|gb|ADC85551.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium animalis subsp. lactis BB-12] Length = 115 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 2/93 (2%) Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL-QKREEIANIGESSKTEIGWGR 310 +THIPTG+VV Q E+SQ +N+A A +L+++L ++ Q+ E A++ S + Sbjct: 1 MTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRHSQVRSLDRSE 60 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +IR+Y P + D RTN + + VLDGDL Sbjct: 61 RIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDL 92 >gi|115372342|ref|ZP_01459651.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1] gi|310819555|ref|YP_003951913.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1] gi|115370555|gb|EAU69481.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1] gi|309392627|gb|ADO70086.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1] Length = 939 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 80/332 (24%), Positives = 143/332 (43%), Gaps = 46/332 (13%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R + L ++T+ P+LW + A +R + ++ I+ ++ ++ + L+ A E Sbjct: 638 ERRNQLLSETQAPNLWDDPARAAATLRAFRTVEAQINELERMEQAVTFARRLVREAKNE- 696 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQD-WANML 137 +Q TS Q ++ E + E+L + A +ND A +++ + E+QD W L Sbjct: 697 ----VQLTSAAKQVEEVAREVQMSEALHASGATANDVEALVDICV-SDSVEAQDAWIQEL 751 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 MY WA+KR + EA+ + + E + I GP AYG+L GE G+HR + Sbjct: 752 ATMYLGWAQKRGY--EAMLVAEAESPA--RVVVRIAGPGAYGFLAGEAGLHRRI------ 801 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +R ++ + +D ++E+S + + GA + V T V + T Sbjct: 802 EEEKRQRAYVRVHRGGALDAPEDLELSVEGRPVKQH--EGAFLERVRTE---VTVKDSAT 856 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G V+ + K A ++ G+++ T+ + R Y L Sbjct: 857 GRVLTLMGSGELDELKGIATRVVS-----------------GQATSTD-----EARRYYL 894 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 V+D RT DVL GD+D F+ A Sbjct: 895 GRGARVEDPRTGAGTPRVKDVLRGDMDLFIAA 926 >gi|121703728|ref|XP_001270128.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL 1] gi|119398272|gb|EAW08702.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL 1] Length = 203 Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 49/83 (59%) Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FS P ++I+++D I + +G GGQ +N T+SAV++ H PTG+VV+ Q Sbjct: 29 FSLTPYLPEKQLPPRLKINDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQA 88 Query: 266 ERSQHKNKAQAWNMLRAKLYELE 288 RS+ +N+ A +L K+ EL+ Sbjct: 89 TRSRSQNEKIARQILADKVEELQ 111 >gi|78224169|ref|YP_385916.1| class I peptide chain release factor [Geobacter metallireducens GS-15] gi|78195424|gb|ABB33191.1| Class I peptide chain release factor [Geobacter metallireducens GS-15] Length = 121 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 38/54 (70%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 E+ ++E+D R+SGAGGQHVN T + V+I H PTG+ V+C ++RSQ N+ Sbjct: 22 ELGVAEADLEESFVRSSGAGGQHVNKTATCVQIKHRPTGIEVKCMKDRSQSVNR 75 >gi|213583737|ref|ZP_03365563.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 147 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 6/149 (4%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNA 177 L++ + G E L T+ A + K LE G ++SA + + G A Sbjct: 4 LQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKA 63 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + + G + SPY + R W + S + I + R +T R+SG Sbjct: 64 MAFSERWCGTLLWICTSPYRPHHGRKN-----WYVGIGRFSADEHIQSDEIRFETLRSSG 118 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 GGQHVN TDSAVR TH+ +G+ V+ Q E Sbjct: 119 PGGQHVNKTDSAVRATHLASGISVKVQSE 147 >gi|171694017|ref|XP_001911933.1| hypothetical protein [Podospora anserina S mat+] gi|170946957|emb|CAP73761.1| unnamed protein product [Podospora anserina S mat+] Length = 187 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 48/79 (60%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ES+ + SG GGQ +N T+SAV+I H+PT +V++CQ RS+ +N+ A ++L +L Sbjct: 10 ESEIEESFLKGSGPGGQKINKTNSAVQIKHLPTNIVIKCQATRSRSQNRKIARDILAERL 69 Query: 285 YELELQKREEIANIGESSK 303 EL + +A +G K Sbjct: 70 DELYNGSQSRVAIVGSVKK 88 >gi|322697002|gb|EFY88787.1| peptidyl-tRNA hydrolase domain protein [Metarhizium acridum CQMa 102] Length = 187 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%) Query: 227 DCRIDT--YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 DC I+ + SG GGQ +N T+SAV++ H+PTG+VV+ Q RS+ +N+ A +L K+ Sbjct: 42 DCEIEESFLKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRSQNRKHARELLAQKV 101 Query: 285 YEL 287 +L Sbjct: 102 DDL 104 >gi|296121082|ref|YP_003628860.1| class I peptide chain release factor [Planctomyces limnophilus DSM 3776] gi|296013422|gb|ADG66661.1| Class I peptide chain release factor [Planctomyces limnophilus DSM 3776] Length = 203 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%) Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 D ++ H S W +PV+ + E S+C+ + SG GGQH N ++ V + H P Sbjct: 24 DPQTQPHASQIQGWKHPVL---LSHEQLLSECKARRQKTSGPGGQHRNKVETGVFLKHTP 80 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKL 284 TGV Q + RSQ +N+++A LR +L Sbjct: 81 TGVEAQATERRSQAENQSKALKRLRLQL 108 >gi|321255196|ref|XP_003193341.1| hypothetical protein CGB_D1860W [Cryptococcus gattii WM276] gi|317459811|gb|ADV21554.1| Hypothetical protein CGB_D1860W [Cryptococcus gattii WM276] Length = 316 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 39/64 (60%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI E + R G GGQ +N T+S+V +THIPTG+ VQ Q RS+ +N+ A +L Sbjct: 126 VEIPEDELEERFVRGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRIL 185 Query: 281 RAKL 284 +L Sbjct: 186 AERL 189 >gi|241951644|ref|XP_002418544.1| conserved hypothetical protein [Candida dubliniensis CD36] gi|223641883|emb|CAX43846.1| conserved hypothetical protein [Candida dubliniensis CD36] Length = 171 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/48 (54%), Positives = 34/48 (70%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 G GGQ +N ++S V++THIPTG+VV CQ RSQ +N+A A L KL Sbjct: 50 GPGGQKINKSNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKL 97 >gi|189425837|ref|YP_001953014.1| class I peptide chain release factor [Geobacter lovleyi SZ] gi|189422096|gb|ACD96494.1| Class I peptide chain release factor [Geobacter lovleyi SZ] Length = 124 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 42/71 (59%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +V E+ + E + RASG GGQH+N T SAV++ H+PTG+ +C +ERSQ N+ Sbjct: 16 LVSRMAELGVKEEELEEQFVRASGRGGQHLNKTSSAVQVRHLPTGIEARCGRERSQSLNR 75 Query: 274 AQAWNMLRAKL 284 A L K+ Sbjct: 76 FLARRELLEKI 86 >gi|150865855|ref|XP_001385239.2| hypothetical protein PICST_60261 [Scheffersomyces stipitis CBS 6054] gi|149387111|gb|ABN67210.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 156 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 36/51 (70%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 G GGQ +N ++S V++TH+PTG+VV CQ RSQ N+ +A +L KL +L Sbjct: 32 GPGGQKINKSNSKVQLTHLPTGIVVTCQYSRSQESNRKRAREILALKLDDL 82 >gi|47226435|emb|CAG08451.1| unnamed protein product [Tetraodon nigroviridis] Length = 156 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 14/118 (11%) Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP---VVDDSIEIEISESDCRIDTYRASG 237 L G + +L+R+ P F ++ ++D + ++E D R SG Sbjct: 20 LTGSSNIFQLLRVRP--------PGFLCVFAAGKKGLIDPPV---LNEDDLEEQFVRGSG 68 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 GGQ N T + V + HIP+G+VV+C Q RS N+ +A +++R KL L+ + EI Sbjct: 69 PGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDINRKRARDIMREKLDVLQKGELSEI 126 >gi|322801028|gb|EFZ21809.1| hypothetical protein SINV_15156 [Solenopsis invicta] Length = 220 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 8/121 (6%) Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 Y++ R+ SF Y V +++E+D R SG GGQ N T++AV + H Sbjct: 91 YENIQVRNKSFKHYLDYSNVP-----KLNEADLEEQFIRGSGPGGQATNKTNNAVLLKHK 145 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE---EIANIGESSKTEIGWGRQI 312 PTG +V+C + RSQ NK +A +L KL L ++R +I + E +T + R+ Sbjct: 146 PTGFIVKCHETRSQWDNKKRAREILITKLDNLLNKERSIEAQIRALEEKQQTRKEYKRKK 205 Query: 313 R 313 R Sbjct: 206 R 206 >gi|85860191|ref|YP_462393.1| peptide chain release factor [Syntrophus aciditrophicus SB] gi|85723282|gb|ABC78225.1| peptide chain release factor [Syntrophus aciditrophicus SB] Length = 136 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/50 (54%), Positives = 35/50 (70%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 ISE D R R+SG GGQ+VN T + V + H+PTG+ V+CQQ+RSQ N Sbjct: 20 ISEDDLRETFIRSSGPGGQNVNKTATCVYLVHLPTGLSVKCQQDRSQTVN 69 >gi|46125917|ref|XP_387512.1| hypothetical protein FG07336.1 [Gibberella zeae PH-1] Length = 189 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 11/101 (10%) Query: 193 ISPYDSNSRRHTSFSSIWVY------PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 I+P + +FSS +Y P E EI ES + SG GGQ +N T Sbjct: 11 IAPRSPFASPTCTFSSTSIYLAKALPPRPKPPPESEIEES-----YVKGSGPGGQKINKT 65 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 +SAV++ H+PTG+VV+ Q RS+ +N+ A +L ++ EL Sbjct: 66 NSAVQLKHVPTGIVVKSQATRSRDQNRKHARELLAQRVDEL 106 >gi|134115677|ref|XP_773552.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256178|gb|EAL18905.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var. neoformans B-3501A] Length = 315 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 39/64 (60%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI E + + G GGQ +N T+S+V +THIPTG+ VQ Q RS+ +N+ A +L Sbjct: 125 VEIPEDELEERFVKGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRIL 184 Query: 281 RAKL 284 +L Sbjct: 185 AERL 188 >gi|294658124|ref|XP_460455.2| DEHA2F02090p [Debaryomyces hansenii CBS767] gi|202952893|emb|CAG88762.2| DEHA2F02090p [Debaryomyces hansenii] Length = 180 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/52 (50%), Positives = 37/52 (71%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 G GGQ +N ++S V++TH PTG+VV CQ RSQ +N+ +A +L KL EL+ Sbjct: 53 GPGGQKINKSNSKVQLTHKPTGLVVTCQYSRSQEQNRKRAREILALKLDELQ 104 >gi|302911185|ref|XP_003050437.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI 77-13-4] gi|256731374|gb|EEU44724.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI 77-13-4] Length = 186 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 8/111 (7%) Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSI---EIEISESDCRIDTYRASGAGGQHVNTTDSA 249 +SP+ S R T S+ + E EI ES + SG GGQ +N T+SA Sbjct: 15 LSPFGSPVRTFTIISTQLAKALPPRPKPPPEFEIEESYVK-----GSGPGGQKINKTNSA 69 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 V++ HIPTG+VV+ Q RS+ +N+ A +L ++ E + A +G+ Sbjct: 70 VQLKHIPTGIVVKSQATRSRDQNRKHARELLAQRVDEFHNGDQSRSAIVGQ 120 >gi|118792472|ref|XP_320337.3| AGAP012195-PA [Anopheles gambiae str. PEST] gi|116116915|gb|EAA00473.4| AGAP012195-PA [Anopheles gambiae str. PEST] Length = 151 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 3/101 (2%) Query: 190 LVRISPYDSNSRRHTSFSSIW---VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 L+R +S ++ +S W + VVD S + + D R SG GGQ V T Sbjct: 4 LLRCVALESTAQWKALSASPWRRCLSKVVDHSRLPVLRDEDLEESFVRGSGPGGQAVAKT 63 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 ++ V +TH PTG+VVQC RS +N+ +A ML KL +L Sbjct: 64 NNKVVLTHKPTGIVVQCHTTRSLFENRREARKMLIGKLDQL 104 >gi|148912865|ref|YP_001293444.1| hypothetical protein ORF037 [Pseudomonas phage 73] Length = 164 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + + +D RIDT+R GA V + ++ VRITHIPTGV V+ RS H NK+ A L Sbjct: 1 MNLDPADIRIDTFRKPGASA-WVASVETCVRITHIPTGVFVERCDLRSAHANKSAAMADL 59 Query: 281 RAKLYELELQK 291 R KL E+ K Sbjct: 60 RKKLDEMPKAK 70 >gi|325110517|ref|YP_004271585.1| class I peptide chain release factor [Planctomyces brasiliensis DSM 5305] gi|324970785|gb|ADY61563.1| Class I peptide chain release factor [Planctomyces brasiliensis DSM 5305] Length = 168 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 36/59 (61%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 S+C + R SG GGQH N ++A+RI H PTGV Q + RSQ +N+ A LR +L Sbjct: 13 SECDVTRQRRSGPGGQHRNKVETAIRIEHRPTGVTGQASERRSQEENRKVALFRLRVEL 71 >gi|253730877|ref|ZP_04865042.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725386|gb|EES94115.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 59 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%) Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E +K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 5 EGNKSDIGWGNQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 55 >gi|85101373|ref|XP_961134.1| hypothetical protein NCU04174 [Neurospora crassa OR74A] gi|16944642|emb|CAD11402.1| conserved hypothetical protein [Neurospora crassa] gi|28922674|gb|EAA31898.1| predicted protein [Neurospora crassa OR74A] Length = 172 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 38/51 (74%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + SG GGQ +N T+SAV++ HIPT +V++CQ+ RS+ +N+ A +L AK+ Sbjct: 18 KGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREILAAKV 68 >gi|213616409|ref|ZP_03372235.1| hypothetical protein SentesTyp_18844 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 65 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 QK+ E +K++IGWG QIRSYVL + +KDLRT +E + VLDG LD F++A Sbjct: 1 QKKNAEKQAMEDTKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEA 59 Query: 350 TL 351 +L Sbjct: 60 SL 61 >gi|330467788|ref|YP_004405531.1| peptide chain release factor-like protein [Verrucosispora maris AB-18-032] gi|328810759|gb|AEB44931.1| peptide chain release factor-like protein [Verrucosispora maris AB-18-032] Length = 202 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 5/168 (2%) Query: 119 LEVHAGAGGTESQDWA-NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL-IKGPN 176 L + AG G E WA LLR A +++ + ++ G+ G + L+ + G Sbjct: 5 LLLSAGRGPQECA-WALAHLLRRLEAEAARQRLRVHRVDTVAGDRPGTYRSVLVEVGGAG 63 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + G SPY + R + + P D+ E ESD + R Sbjct: 64 VEAFAASWTGTLCWQAPSPYRAGVGRKNWYVTAQPCPADPDATCFE--ESDVEVVACRTG 121 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 G GGQH N +AVR TH PTG+VV ER N+ A +LR +L Sbjct: 122 GPGGQHRNKVSTAVRATHRPTGLVVVVDTERQFSLNRRIALRLLRQRL 169 >gi|289613196|emb|CBI59790.1| unnamed protein product [Sordaria macrospora] Length = 250 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 38/51 (74%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + SG GGQ +N T+SAV++ HIPT +V++CQ+ RS+ +N+ A +L AK+ Sbjct: 94 KGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREILAAKV 144 >gi|116878616|ref|YP_357940.2| putative peptide chain release factor [Pelobacter carbinolicus DSM 2380] gi|114843252|gb|ABA89770.2| putative peptide chain release factor [Pelobacter carbinolicus DSM 2380] Length = 138 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 42/76 (55%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + I++ D I ++A G GGQH N T++AVRI H P+G+ V + RS+ N A L Sbjct: 32 MTINKQDLDITFFKAGGPGGQHRNKTETAVRIHHRPSGITVTASERRSRQANIEHALERL 91 Query: 281 RAKLYELELQKREEIA 296 +L + + R IA Sbjct: 92 AQRLEAMRRKPRRRIA 107 >gi|213514146|ref|NP_001134302.1| CL065 protein [Salmo salar] gi|209732210|gb|ACI66974.1| C12orf65 homolog [Salmo salar] Length = 166 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 33/51 (64%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R SG GGQ N T + V + HIPTG+VV+C Q RS N+ +A ++R KL Sbjct: 62 RGSGPGGQATNKTSNCVVLRHIPTGIVVKCHQTRSVETNRKRARQIMREKL 112 >gi|209736218|gb|ACI68978.1| C12orf65 homolog [Salmo salar] Length = 166 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 33/51 (64%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R SG GGQ N T + V + HIPTG+VV+C Q RS N+ +A ++R KL Sbjct: 62 RGSGPGGQATNKTSNCVVLRHIPTGIVVKCHQTRSVETNRKRARRIMREKL 112 >gi|310792386|gb|EFQ27913.1| RF-1 domain-containing protein [Glomerella graminicola M1.001] Length = 193 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 43/67 (64%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 + SG GGQ +N T SAV++ HIPTGVVV+ Q RS+ +N+ A +L KL +L+ + Sbjct: 59 KGSGPGGQKINKTSSAVQLKHIPTGVVVKSQATRSRTQNRKIAREILAQKLDDLQNGDQS 118 Query: 294 EIANIGE 300 A +GE Sbjct: 119 RSAIVGE 125 >gi|298369317|ref|ZP_06980635.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str. F0314] gi|298283320|gb|EFI24807.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str. F0314] Length = 106 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 6/97 (6%) Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSY 315 +VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G + IR+Y Sbjct: 1 MVVECQDGRSQHANKAQAMKVLAARLN--DAQKREAQAKEAAERKSLIGSGDRSECIRTY 58 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R N+ V+DGDL++ A +A Sbjct: 59 NY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIA 94 >gi|119467602|ref|XP_001257607.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL 181] gi|119405759|gb|EAW15710.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL 181] Length = 208 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 3/95 (3%) Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I P S R T SS+ + ++I ++D + + +G GGQ +N T+SAV++ Sbjct: 26 IHPPPSLRRSFTLASSLSAKQL---PPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQL 82 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 H PTG+VV+ Q RS+ +N+ A +L K+ EL Sbjct: 83 IHKPTGIVVKSQATRSRSQNEKIARQILADKVEEL 117 >gi|12329992|emb|CAC24560.1| mitochondrial peptide chain release factor [Platichthys flesus] Length = 183 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 6/128 (4%) Query: 113 DSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 DS++ LEV +G GG Q + + MY +A + + E + G+ A + Sbjct: 56 DSSNDLLEVVSGRTTGGDICQQFTKEMFDMYQGFAFYKNWDFEVYNYTSADFGGLHHAAV 115 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR---HTSFSSIWVYPVVDDSIEIEISESD 227 I G N Y LK E G HR+ RI +SR HT ++ + P + ++ I D Sbjct: 116 RIAGDNVYRHLKHEGGTHRVQRIPEVGLSSRMQRIHTGTMTVIILPQPVE-FDVHIDPKD 174 Query: 228 CRIDTYRA 235 RIDT+RA Sbjct: 175 LRIDTFRA 182 >gi|169597527|ref|XP_001792187.1| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15] gi|160707538|gb|EAT91198.2| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15] Length = 236 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 46/84 (54%) Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S + + + +SD SG GGQ +N T SAV++ HIPTG+VV+ Q Sbjct: 24 FTSTRTHLAKSLPPRVPLPDSDIIEKFLHGSGPGGQKINKTSSAVQLKHIPTGIVVKYQD 83 Query: 266 ERSQHKNKAQAWNMLRAKLYELEL 289 RS+ N+ A +L+ ++ E EL Sbjct: 84 TRSRTVNRKMARKILQERIEEAEL 107 >gi|195611870|gb|ACG27765.1| peptide chain release factor 2 [Zea mays] Length = 262 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 51/97 (52%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q LL G D A + V A + G S+ WA + MYT WA K+ +K +E Sbjct: 157 QMYKLLKGPYDKEGACIIVTAVSNGVTSELWAEKVFGMYTSWARKQGYKVGLIEKIFSTS 216 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 I+SAT+ I+ +G L GE+G+H+++ S +S+ Sbjct: 217 GHIQSATMEIESEYMFGTLSGEKGMHQMIYSSIENSD 253 >gi|187607772|ref|NP_001119948.1| hypothetical protein LOC100004874 [Danio rerio] gi|162416112|sp|A5WUX7|CL065_DANRE RecName: Full=Probable peptide chain release factor C12orf65 homolog, mitochondrial; Flags: Precursor gi|148726035|emb|CAN87842.1| novel protein [Danio rerio] Length = 156 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Query: 211 VYPVVDDSIEIE---ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +IE + E + R SG GGQ N T + V + HIP+G+VV+C + R Sbjct: 27 VLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETR 86 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 S N+ +A +LR KL E+A GE S Sbjct: 87 SVDLNRKRAREILREKL---------EVAYKGEES 112 >gi|271961827|ref|YP_003336023.1| peptide chain release factor-like protein [Streptosporangium roseum DSM 43021] gi|270505002|gb|ACZ83280.1| peptide chain release factor-like protein [Streptosporangium roseum DSM 43021] Length = 219 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 5/169 (2%) Query: 118 YLEVHAGAGGTESQDWA-NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL-IKGP 175 +L + AG G E WA LLR A ++ +T + G+ + L+ I G Sbjct: 4 HLLLSAGRGPQECA-WALARLLRRLEADATRQNLETHRAQTVPGDRPDTYRSVLIQISGA 62 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + G SPY + + R + + P D+ +E+D I R Sbjct: 63 GAEAFAASWTGTLCWQAPSPYRAGTGRKNWY--VIAQPCQVDTPRTTFAEADVDIVACRT 120 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 G GGQH N +AVR TH P+G+VV ER N+ A +LR ++ Sbjct: 121 GGPGGQHRNKASTAVRATHRPSGIVVVVDTERQFSLNRRIAMRLLRQRI 169 >gi|219362723|ref|NP_001136772.1| hypothetical protein LOC100216914 [Zea mays] gi|194697000|gb|ACF82584.1| unknown [Zea mays] Length = 262 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 51/97 (52%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q LL G D A + V A + G S+ WA + MYT WA K+ +K +E Sbjct: 157 QMYKLLKGPYDKEGACIIVTAVSNGVTSELWAEKVFGMYTSWARKQGYKVGLIEKIFSTS 216 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 I+SAT+ I+ +G L GE+G+H+++ S +S+ Sbjct: 217 GHIQSATMEIESEYMFGTLSGEKGMHQMIYSSLENSD 253 >gi|148726036|emb|CAN87843.1| novel protein [Danio rerio] Length = 137 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Query: 211 VYPVVDDSIEIE---ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +IE + E + R SG GGQ N T + V + HIP+G+VV+C + R Sbjct: 8 VLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETR 67 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 S N+ +A +LR KL E+A GE S Sbjct: 68 SVDLNRKRAREILREKL---------EVAYKGEES 93 >gi|189519733|ref|XP_001340041.2| PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial [Danio rerio] Length = 156 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Query: 211 VYPVVDDSIEIE---ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +IE + E + R SG GGQ N T + V + HIP+G+VV+C + R Sbjct: 27 VLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCHETR 86 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 S N+ +A +LR KL E+A GE S Sbjct: 87 SVDLNRKRAREILREKL---------EVAYKGEES 112 >gi|322705423|gb|EFY97009.1| peptidyl-tRNA hydrolase domain protein [Metarhizium anisopliae ARSEF 23] Length = 182 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 38/54 (70%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 + SG GGQ +N T+SAV++ H+PTG+VV+ Q RS+ +N+ A +L K+ +L Sbjct: 51 KGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRSQNRKHARELLAQKVDDL 104 >gi|324521421|gb|ADY47851.1| Peptide chain release factor [Ascaris suum] Length = 141 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 8/74 (10%) Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V+P EI DC SG GGQ VNT +AV + HIPTG+VV+ + R Sbjct: 32 YVFP--------EIRREDCEQKFISGSGPGGQKVNTAQNAVMLKHIPTGIVVKVHESRLL 83 Query: 270 HKNKAQAWNMLRAK 283 KN A+ LR K Sbjct: 84 PKNIEIAYERLRLK 97 >gi|156552109|ref|XP_001605206.1| PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] Length = 159 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 36/58 (62%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 +D S +I+E D I R SG GGQ N T + V + H+PTG+V++C + RSQ +N Sbjct: 37 IDTSKVPKINEDDLEIQYVRGSGPGGQSTNKTSNNVVMKHLPTGLVIKCHETRSQTQN 94 >gi|327276060|ref|XP_003222789.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like [Anolis carolinensis] Length = 197 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 40/64 (62%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ++E+D R SG GGQ N T + V + H+P+G+VV+C Q RS +N+ +A +L Sbjct: 86 LPLNEADLEEQFVRGSGPGGQATNKTSNCVVLKHLPSGIVVKCHQTRSVEQNRKKARTIL 145 Query: 281 RAKL 284 + K+ Sbjct: 146 QEKV 149 >gi|238494178|ref|XP_002378325.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus NRRL3357] gi|317148917|ref|XP_003190253.1| peptidyl-tRNA hydrolase domain protein [Aspergillus oryzae RIB40] gi|220694975|gb|EED51318.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus NRRL3357] Length = 176 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 45/68 (66%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +++ ++D I + +G GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L Sbjct: 39 LKLHDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQATRSRSQNEKIARQLL 98 Query: 281 RAKLYELE 288 K+ +LE Sbjct: 99 ADKVEQLE 106 >gi|70984320|ref|XP_747675.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus Af293] gi|66845302|gb|EAL85637.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus Af293] gi|159122461|gb|EDP47582.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus A1163] Length = 208 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 3/95 (3%) Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I P S R T SS+ + ++I ++D + + +G GGQ +N T+SAV++ Sbjct: 26 IHPPPSLRRSFTLASSLSAKQLPP---RLKIDDADLTVSYLKGTGPGGQKINKTNSAVQL 82 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 H PTG+VV+ Q RS+ +N+ A +L K+ EL Sbjct: 83 IHKPTGIVVKSQATRSRSQNEKIARQILADKVEEL 117 >gi|46203521|ref|ZP_00208999.1| COG1186: Protein chain release factor B [Magnetospirillum magnetotacticum MS-1] Length = 51 Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 25/37 (67%), Positives = 31/37 (83%) Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +LQPYQ+VKDLRT + T P +VLDGDLD FM+A+LA Sbjct: 1 MLQPYQLVKDLRTGTQSTDPDEVLDGDLDPFMEASLA 37 >gi|224924358|gb|ACN69129.1| mitochondrial polypeptide chain release factor [Stomoxys calcitrans] Length = 183 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 4/83 (4%) Query: 206 FSSIWVYPV----VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 FSS+ Y + +D S ++E D R SG GGQ +N T + V + H+PT +VV Sbjct: 41 FSSLLFYRLKHQQLDYSRYPTLNEEDLEETFTRGSGPGGQALNKTSNCVLLRHLPTNIVV 100 Query: 262 QCQQERSQHKNKAQAWNMLRAKL 284 +C RS KN+ +A +L KL Sbjct: 101 KCHIHRSAQKNRVEARKILLEKL 123 >gi|71900159|ref|ZP_00682300.1| PCRF [Xylella fastidiosa Ann-1] gi|71730108|gb|EAO32198.1| PCRF [Xylella fastidiosa Ann-1] Length = 270 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 39/70 (55%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D + +LEV AG GG E+ +A L RMYTR+AE++++K E GE G K I Sbjct: 107 DECNLFLEVRAGTGGDEAAIFAGNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARI 166 Query: 173 KGPNAYGWLK 182 G AY LK Sbjct: 167 VGRGAYSRLK 176 >gi|197120075|ref|YP_002140502.1| peptidyl-tRNA hydrolase-like protein [Geobacter bemidjiensis Bem] gi|197089435|gb|ACH40706.1| peptidyl-tRNA hydrolase-related protein [Geobacter bemidjiensis Bem] Length = 132 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 38/65 (58%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 E+ +SE ASG GGQHVN + S V + H+PTGV V+C + RSQ N+ A + Sbjct: 20 ELGVSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLARRL 79 Query: 280 LRAKL 284 L K+ Sbjct: 80 LLEKI 84 >gi|197123884|ref|YP_002135835.1| class I peptide chain release factor [Anaeromyxobacter sp. K] gi|196173733|gb|ACG74706.1| Class I peptide chain release factor [Anaeromyxobacter sp. K] Length = 128 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 ++C + G GGQH N T+S VR+ H PT + V + RSQ +N+ A LRA+L Sbjct: 29 AECDESFFVGGGPGGQHRNKTESGVRLVHRPTAITVTATERRSQLQNRGAALERLRARLQ 88 Query: 286 EL 287 L Sbjct: 89 PL 90 >gi|156837376|ref|XP_001642715.1| hypothetical protein Kpol_345p5 [Vanderwaltozyma polyspora DSM 70294] gi|156113276|gb|EDO14857.1| hypothetical protein Kpol_345p5 [Vanderwaltozyma polyspora DSM 70294] Length = 162 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 4/64 (6%) Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P ++ +E E +ES + G GGQ +N ++S V++ HIPTG+VV+CQ+ RS+ +N Sbjct: 26 PKFNEQLETECTESF----MHGGRGPGGQKINKSNSKVQLKHIPTGIVVECQETRSRDQN 81 Query: 273 KAQA 276 + A Sbjct: 82 RKIA 85 >gi|270013378|gb|EFA09826.1| hypothetical protein TcasGA2_TC011973 [Tribolium castaneum] Length = 179 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 44/80 (55%) Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 SI + +D S ++ ES+ R SG GGQ N T + V + H+PTG+VV+C + R Sbjct: 57 SIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVVKCHETR 116 Query: 268 SQHKNKAQAWNMLRAKLYEL 287 S +N+ +A L KL L Sbjct: 117 SLDQNRKKARQYLVTKLDNL 136 >gi|253702397|ref|YP_003023586.1| class I peptide chain release factor [Geobacter sp. M21] gi|251777247|gb|ACT19828.1| Class I peptide chain release factor [Geobacter sp. M21] Length = 132 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 38/65 (58%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 E+ +SE ASG GGQHVN + S V + H+PTGV V+C + RSQ N+ A + Sbjct: 20 ELGVSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLARRL 79 Query: 280 LRAKL 284 L K+ Sbjct: 80 LLEKI 84 >gi|189911793|ref|YP_001963348.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776469|gb|ABZ94770.1| Peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] Length = 131 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I ESD + +ASG GGQ+VN +AV + H+PTG V+C RSQ N+ +A ++L Sbjct: 27 IRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYKARDLL-- 84 Query: 283 KLYELELQKREE 294 ELE ++R E Sbjct: 85 -CLELEKEQRPE 95 >gi|189241033|ref|XP_971712.2| PREDICTED: similar to AGAP012195-PA [Tribolium castaneum] Length = 132 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 44/80 (55%) Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 SI + +D S ++ ES+ R SG GGQ N T + V + H+PTG+VV+C + R Sbjct: 10 SIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVVKCHETR 69 Query: 268 SQHKNKAQAWNMLRAKLYEL 287 S +N+ +A L KL L Sbjct: 70 SLDQNRKKARQYLVTKLDNL 89 >gi|326929619|ref|XP_003210956.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like [Meleagris gallopavo] Length = 165 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 40/64 (62%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++++E++ + R G GGQ N T + V + H+P+G+VV+C Q RS KN+ A +L Sbjct: 54 VQLTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIAREIL 113 Query: 281 RAKL 284 + K+ Sbjct: 114 QEKV 117 >gi|220918650|ref|YP_002493954.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans 2CP-1] gi|219956504|gb|ACL66888.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans 2CP-1] Length = 123 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 ++C + G GGQH N T+S VR+ H PT + V + RSQ +N+ A LRA+L Sbjct: 24 AECDESFFVGGGPGGQHRNKTESGVRLVHRPTAITVTATERRSQLQNRGAALERLRARLQ 83 Query: 286 EL 287 L Sbjct: 84 PL 85 >gi|307170845|gb|EFN62956.1| Uncharacterized protein C12orf65-like protein [Camponotus floridanus] Length = 138 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 19/106 (17%) Query: 195 PYDSNS-RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 P S S +RH +S + P +D E+D R SG GGQ N T++AV + Sbjct: 13 PVRSKSYKRHLDYSKV---PKLD--------EADLEEKFIRGSGPGGQATNKTNNAVSLK 61 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-------YELELQKR 292 H PTG+VV+C + RS NK +A ++ KL Y +E Q R Sbjct: 62 HKPTGLVVKCHETRSLWDNKKRAREIMITKLDNLLNKEYSIEAQIR 107 >gi|182414215|ref|YP_001819281.1| class I peptide chain release factor [Opitutus terrae PB90-1] gi|177841429|gb|ACB75681.1| Class I peptide chain release factor [Opitutus terrae PB90-1] Length = 131 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + + + + E D R R SG GGQ +N T S V + H PTGV V+CQ ERSQ N+ A Sbjct: 12 NRLGVRVEEVDERF--VRGSGPGGQKINKTSSTVWLRHGPTGVEVRCQAERSQAANREVA 69 Query: 277 WNMLRAKL 284 W L KL Sbjct: 70 WWELCEKL 77 >gi|145550427|ref|XP_001460892.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124428723|emb|CAK93495.1| unnamed protein product [Paramecium tetraurelia] Length = 723 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI ++D + G GGQ +N T + V++TH PTG+ ++CQ+ R NK A L Sbjct: 611 VEIHQTDLEWKFIKGGGPGGQAINKTSNCVQLTHTPTGIQIKCQKSRDLETNKNYAIKAL 670 Query: 281 RAKLYELELQKREEIANI 298 + KL E ++ +ANI Sbjct: 671 KEKLDE-QINGTNSLANI 687 >gi|302690942|ref|XP_003035150.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8] gi|300108846|gb|EFJ00248.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8] Length = 257 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 40/66 (60%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 E+ E D R SG GGQ +N T + V++ H PTG+ V CQ+ RS +N+ +A ++ Sbjct: 152 ELREEDLEESFVRGSGPGGQAINKTANNVQLVHKPTGIRVVCQETRSLEQNRKRARKIMI 211 Query: 282 AKLYEL 287 AKL +L Sbjct: 212 AKLDQL 217 >gi|322421630|ref|YP_004200853.1| Class I peptide chain release factor [Geobacter sp. M18] gi|320128017|gb|ADW15577.1| Class I peptide chain release factor [Geobacter sp. M18] Length = 143 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 39/65 (60%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 ++ ++E D ASG GGQHVN + S V + HIP+G+ V+C + RSQ N+ A + Sbjct: 20 QLGVAEKDLEERFVHASGRGGQHVNKSSSCVYLKHIPSGLEVKCMESRSQSLNRFLARRL 79 Query: 280 LRAKL 284 L KL Sbjct: 80 LLEKL 84 >gi|320587327|gb|EFW99807.1| peptidyl-tRNA hydrolase domain containing protein [Grosmannia clavigera kw1407] Length = 149 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 44/70 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 + +G GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L A+L EL + Sbjct: 61 KGTGPGGQKINKTNSAVQLIHRPTGIVVKSQATRSRSQNRTIARQVLAARLDELHNGSQS 120 Query: 294 EIANIGESSK 303 A + +S + Sbjct: 121 RTAIVADSKR 130 >gi|224369062|ref|YP_002603226.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum HRM2] gi|223691779|gb|ACN15062.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum HRM2] Length = 118 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 37/61 (60%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 ++ I+++D + SG GGQ VN T AV + H+PTG+ V+C ERSQH N+ A Sbjct: 18 DLGINKADIEEKFVKGSGRGGQKVNKTSVAVFLRHLPTGITVKCGSERSQHLNRFLALRR 77 Query: 280 L 280 L Sbjct: 78 L 78 >gi|183221718|ref|YP_001839714.1| putative translation release factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167780140|gb|ABZ98438.1| Putative translation release factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 110 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I ESD + +ASG GGQ+VN +AV + H+PTG V+C RSQ N+ +A ++L Sbjct: 6 IRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYKARDLL-- 63 Query: 283 KLYELELQKREE 294 ELE ++R E Sbjct: 64 -CLELEKEQRPE 74 >gi|118581341|ref|YP_902591.1| class I peptide chain release factor [Pelobacter propionicus DSM 2379] gi|118504051|gb|ABL00534.1| Class I peptide chain release factor [Pelobacter propionicus DSM 2379] Length = 117 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 34/53 (64%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 + + E D R+SG+GGQHVN T S+V + HIP+G+ V +ERSQ N+ Sbjct: 21 LNVREEDLEEQFVRSSGSGGQHVNKTSSSVFLRHIPSGICVSASRERSQSVNR 73 >gi|195426674|ref|XP_002061432.1| GK20726 [Drosophila willistoni] gi|194157517|gb|EDW72418.1| GK20726 [Drosophila willistoni] Length = 167 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 36/68 (52%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IE ESD R SG GGQ VN T + V + H+PT + ++C R KN+ +A Sbjct: 51 IEFSFKESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNLTIKCHTHRLASKNRIEARK 110 Query: 279 MLRAKLYE 286 +L KL E Sbjct: 111 LLLEKLDE 118 >gi|110224725|emb|CAJ98860.1| peptide release factor protein 2 [Francisella philomiragia] gi|110224727|emb|CAJ98861.1| peptide release factor protein 2 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 101 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 2/103 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 D +W N A+ L R++ L+N + + I + L LLELA E++ S++QE + + Sbjct: 1 DGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEEDE--SLMQEIAKD 58 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA Sbjct: 59 TQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWA 101 >gi|229368188|gb|ACQ59074.1| C12orf65 homolog [Anoplopoma fimbria] Length = 169 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 3/60 (5%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL---YELEL 289 R SG GGQ N T + V + HIP+G VV+C Q RS N+ +A +++R KL Y+ EL Sbjct: 64 VRGSGPGGQATNKTGNCVVLKHIPSGTVVKCHQTRSVDINRKRARDIMREKLDVVYKGEL 123 >gi|153006316|ref|YP_001380641.1| class I peptide chain release factor [Anaeromyxobacter sp. Fw109-5] gi|152029889|gb|ABS27657.1| Class I peptide chain release factor [Anaeromyxobacter sp. Fw109-5] Length = 122 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 34/60 (56%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 C + G GGQH N T+SAVR+ H PTGV V + RSQ +N+ A LR +L L Sbjct: 25 CEETFFVGGGPGGQHRNKTESAVRLVHRPTGVTVTATERRSQLQNREAALARLRERLGPL 84 >gi|255725070|ref|XP_002547464.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240135355|gb|EER34909.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 172 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/48 (47%), Positives = 32/48 (66%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 G GGQ +N +S V++ HIPTG+V+ CQ RS+ +N+A A L KL Sbjct: 51 GPGGQKINKCNSKVQLKHIPTGIVIDCQATRSKEQNRAIAREKLALKL 98 >gi|189183342|ref|YP_001937127.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str. Ikeda] gi|189180113|dbj|BAG39893.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str. Ikeda] Length = 86 Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 23/53 (43%), Positives = 35/53 (66%) Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 +N D AV+ITHIPT ++ +C+ +S +KNK +A L+ LYE EL+K + Sbjct: 18 INPVDYAVKITHIPTSIITECRSYKSHYKNKIEAILSLKKTLYERELKKNSSM 70 >gi|213583753|ref|ZP_03365579.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 166 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 36/54 (66%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K Sbjct: 107 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYK 160 >gi|110224561|emb|CAJ98778.1| peptide release factor protein 2 [Francisella tularensis subsp. tularensis] gi|110224571|emb|CAJ98783.1| peptide release factor protein 2 [Francisella tularensis subsp. tularensis ATCC 6223] gi|110224573|emb|CAJ98784.1| peptide release factor protein 2 [Francisella tularensis subsp. tularensis] gi|110224575|emb|CAJ98785.1| peptide release factor protein 2 [Francisella novicida] Length = 101 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 37/50 (74%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +QE + + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA Sbjct: 52 MQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101 >gi|110224557|emb|CAJ98776.1| peptide release factor protein 2 [Francisella tularensis subsp. mediasiatica] gi|110224559|emb|CAJ98777.1| peptide release factor protein 2 [Francisella novicida] gi|110224563|emb|CAJ98779.1| peptide release factor protein 2 [Francisella novicida] gi|110224587|emb|CAJ98791.1| peptide release factor protein 2 [Francisella tularensis subsp. mediasiatica] Length = 101 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 37/50 (74%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +QE + + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA Sbjct: 52 MQEIAKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101 >gi|86159828|ref|YP_466613.1| class I peptide chain release factor [Anaeromyxobacter dehalogenans 2CP-C] gi|85776339|gb|ABC83176.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans 2CP-C] Length = 123 Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 ++C + G GGQH N T+S VR+ H PT + V + RSQ +N+ A LRA+L Sbjct: 24 AECDESFFVGGGPGGQHRNKTESGVRLVHRPTEITVTATERRSQLQNRGAALERLRARLQ 83 Query: 286 EL 287 L Sbjct: 84 PL 85 >gi|312370878|gb|EFR19185.1| hypothetical protein AND_22936 [Anopheles darlingi] Length = 225 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 41/73 (56%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D+S + E D R SG GGQ V T++ V +TH PTG+VVQC RS +N+ Sbjct: 106 IDNSRVPVLQEDDLEESFVRGSGPGGQSVAKTNNKVVLTHKPTGLVVQCHTSRSLFENRR 165 Query: 275 QAWNMLRAKLYEL 287 A +L KL +L Sbjct: 166 IARQLLVTKLDQL 178 >gi|189485401|ref|YP_001956342.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287360|dbj|BAG13881.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 136 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 39/65 (60%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 ++ ESD R+SG GGQ+VN + V + H PTG+ V+C++ER Q N+ A +L Sbjct: 22 KVQESDIEEKFIRSSGKGGQNVNKVSTTVYLKHYPTGIEVKCRRERIQGLNRFFARRLLA 81 Query: 282 AKLYE 286 K+ E Sbjct: 82 EKIEE 86 >gi|148266078|ref|YP_001232784.1| class I peptide chain release factor [Geobacter uraniireducens Rf4] gi|146399578|gb|ABQ28211.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4] Length = 127 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 5/78 (6%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + E D R+SG GGQHVN T + V + H PTG+ V+C +ERSQ N+ A R Sbjct: 23 VREEDIDEQFIRSSGKGGQHVNKTSTCVYLKHKPTGIEVKCMRERSQSLNRFLA----RR 78 Query: 283 KLYELELQKREEIANIGE 300 +L E +++ R IA G+ Sbjct: 79 ELLE-KIEARAGIATAGD 95 >gi|115756417|ref|XP_001202254.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115938185|ref|XP_798467.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 156 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 34/51 (66%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R SG GGQ N T + V + HIPTG+VV+C Q RSQ +N+ A +++ +L Sbjct: 43 RGSGPGGQATNKTSNCVVLKHIPTGLVVKCHQTRSQSENQKIARLLMKERL 93 >gi|195121186|ref|XP_002005101.1| GI19248 [Drosophila mojavensis] gi|193910169|gb|EDW09036.1| GI19248 [Drosophila mojavensis] Length = 141 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 36/62 (58%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + ESD R SG GGQ VN T++ V + H+PTG+ V+C R KN+ +A +L Sbjct: 32 LQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGITVKCHLHRLASKNRIEARKILLE 91 Query: 283 KL 284 KL Sbjct: 92 KL 93 >gi|307197489|gb|EFN78723.1| Uncharacterized protein C12orf65-like protein [Harpegnathos saltator] Length = 165 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 39/63 (61%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 ++ E+D + R SG GGQ N T++AV + H PTG+VV+C + RS N+ +A +L Sbjct: 57 KLEEADLKEQFVRGSGPGGQATNKTNNAVVLKHKPTGIVVKCHETRSLWDNQKRARELLV 116 Query: 282 AKL 284 KL Sbjct: 117 TKL 119 >gi|196230546|ref|ZP_03129408.1| Class I peptide chain release factor [Chthoniobacter flavus Ellin428] gi|196225476|gb|EDY19984.1| Class I peptide chain release factor [Chthoniobacter flavus Ellin428] Length = 132 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 23/47 (48%), Positives = 29/47 (61%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 R+SG GGQHVN +AV + H+P+G V Q RSQ N+ AW L Sbjct: 31 RSSGPGGQHVNKVSTAVMLRHVPSGAAVTVQDTRSQSMNRQLAWTRL 77 >gi|332373588|gb|AEE61935.1| unknown [Dendroctonus ponderosae] Length = 138 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 11/85 (12%) Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 S++H +S + P ++ E D + SG GGQ V+ T S + + HIPTG+ Sbjct: 19 SKKHIDYSQV---PALN--------EQDLEEKQVKGSGPGGQKVSKTSSCIVLKHIPTGI 67 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKL 284 VV+CQ+ RS +NK A L KL Sbjct: 68 VVKCQETRSVLQNKKIARLHLITKL 92 >gi|324558223|gb|ADY49829.1| Peptide chain release factor 1 [Ascaris suum] Length = 51 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 23/42 (54%), Positives = 30/42 (71%) Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 +I+T RASG GGQ+VN +AVR+TH +G+ V C ER QH Sbjct: 7 KIETMRASGPGGQNVNKRSTAVRVTHKSSGISVHCMDERFQH 48 >gi|115378407|ref|ZP_01465569.1| peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca DW4/3-1] gi|310819398|ref|YP_003951756.1| peptidyl-tRNA hydrolase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364597|gb|EAU63670.1| peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca DW4/3-1] gi|309392470|gb|ADO69929.1| Peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 125 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/60 (46%), Positives = 35/60 (58%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 C ++ + ASG GGQH NTT S VR+TH T + V + RSQ +NK A LR L L Sbjct: 26 CEVEYFIASGPGGQHRNTTASGVRLTHPSTELSVTATERRSQIQNKGVALERLREGLKVL 85 >gi|225715830|gb|ACO13761.1| C12orf65 homolog [Esox lucius] Length = 167 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 32/51 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R SG GGQ N T + V + H PTG+VV+C Q RS N+ +A ++R KL Sbjct: 63 RGSGPGGQATNKTSNCVVLRHNPTGIVVKCHQTRSVETNRKRARQIMREKL 113 >gi|225717004|gb|ACO14348.1| C12orf65 homolog [Esox lucius] Length = 167 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 32/51 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R SG GGQ N T + V + H PTG+VV+C Q RS N+ +A ++R KL Sbjct: 63 RGSGPGGQATNKTSNCVVLRHNPTGIVVKCHQTRSVETNRKRARQIMREKL 113 >gi|195161900|ref|XP_002021796.1| GL26306 [Drosophila persimilis] gi|194103596|gb|EDW25639.1| GL26306 [Drosophila persimilis] Length = 313 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 41/70 (58%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 V+AGAGG E+ +A L MYT + E ++ E + G++ A +++ G +A+ W Sbjct: 135 VNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIGGLRHANVMVNGADAFHW 194 Query: 181 LKGEQGVHRL 190 L+ E GVHR+ Sbjct: 195 LRFEAGVHRV 204 >gi|110224567|emb|CAJ98781.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] gi|110224577|emb|CAJ98786.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] gi|110224579|emb|CAJ98787.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] gi|110224581|emb|CAJ98788.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] gi|110224583|emb|CAJ98789.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] gi|110224585|emb|CAJ98790.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] Length = 101 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 36/50 (72%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +QE + + Q + E+E +F + SG+ D+N A+L++ +G+GGTE+QDWA Sbjct: 52 MQEIAKDTQNVASEIEKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWA 101 >gi|302343659|ref|YP_003808188.1| class I peptide chain release factor [Desulfarculus baarsii DSM 2075] gi|301640272|gb|ADK85594.1| Class I peptide chain release factor [Desulfarculus baarsii DSM 2075] Length = 113 Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 38/60 (63%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E + + +RASG GGQH N ++ VR+TH+P+G+VV + RS+ +N+ A L +L Sbjct: 9 EHELSWEYFRASGPGGQHRNKVETGVRLTHLPSGLVVSATERRSREQNRQAALERLARRL 68 >gi|242214518|ref|XP_002473081.1| predicted protein [Postia placenta Mad-698-R] gi|220727819|gb|EED81727.1| predicted protein [Postia placenta Mad-698-R] Length = 268 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 E+ E D R SG GGQ +N T++ V++ H PTG+ V CQ+ RS +N+ A +L Sbjct: 161 ELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRKLARRILL 220 Query: 282 AK---LYELELQKRE 293 K LY L K+E Sbjct: 221 GKLDALYNPGLSKQE 235 >gi|195382982|ref|XP_002050205.1| GJ20325 [Drosophila virilis] gi|195404316|ref|XP_002060447.1| GJ15534 [Drosophila virilis] gi|194145002|gb|EDW61398.1| GJ20325 [Drosophila virilis] gi|194156312|gb|EDW71496.1| GJ15534 [Drosophila virilis] Length = 142 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 39/70 (55%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D S + ESD R SG GGQ VN T++ V + H+PTG+ V+C R KN+ Sbjct: 24 LDYSRYPSLQESDIEETLLRGSGPGGQAVNKTNNCVFLRHLPTGITVKCHLHRLASKNRI 83 Query: 275 QAWNMLRAKL 284 +A +L KL Sbjct: 84 EARKILLDKL 93 >gi|222053782|ref|YP_002536144.1| Class I peptide chain release factor [Geobacter sp. FRC-32] gi|221563071|gb|ACM19043.1| Class I peptide chain release factor [Geobacter sp. FRC-32] Length = 139 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 35/62 (56%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + E D R+SG GGQHVN T + V + H PTG+ V+C ERSQ N+ A L Sbjct: 23 VREEDLDEQFIRSSGKGGQHVNKTSTCVYLRHRPTGIEVKCMAERSQSLNRFLARRQLLE 82 Query: 283 KL 284 K+ Sbjct: 83 KI 84 >gi|196010673|ref|XP_002115201.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens] gi|190582584|gb|EDV22657.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens] Length = 125 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 37/63 (58%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 +I D + SG GGQ VN + + V + H PTG+V++C Q RSQ+ N+ A +L+ Sbjct: 20 QIPTKDIEESFVKGSGPGGQKVNKSSNCVILKHKPTGIVIKCHQSRSQYHNRIIARQLLK 79 Query: 282 AKL 284 K+ Sbjct: 80 DKI 82 >gi|145594573|ref|YP_001158870.1| class I peptide chain release factor [Salinispora tropica CNB-440] gi|145303910|gb|ABP54492.1| Class I peptide chain release factor [Salinispora tropica CNB-440] Length = 202 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 45/98 (45%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D +E+D + R G GGQH N +AVR TH PTG VV ER N++ A Sbjct: 102 DVPVTPFTEADVEVLAVRTGGPGGQHRNKASTAVRATHRPTGTVVVVDTERQLSLNRSIA 161 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +LR ++ + R + I + E+ G R+ Sbjct: 162 LRLLRQRITAGDEAARRALVAIRRRAHDEVVRGGPTRT 199 >gi|242223756|ref|XP_002477455.1| predicted protein [Postia placenta Mad-698-R] gi|220722947|gb|EED77345.1| predicted protein [Postia placenta Mad-698-R] Length = 275 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 E+ E D R SG GGQ +N T++ V++ H PTG+ V CQ+ RS +N+ A +L Sbjct: 166 ELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRKLARRILL 225 Query: 282 AK---LYELELQKRE 293 K LY L K+E Sbjct: 226 GKLDALYNPGLSKQE 240 >gi|195029889|ref|XP_001987804.1| GH22113 [Drosophila grimshawi] gi|193903804|gb|EDW02671.1| GH22113 [Drosophila grimshawi] Length = 148 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 39/70 (55%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D S + ESD R SG GGQ VN T++ V + H+PTG+ V+C R KN+ Sbjct: 26 LDYSRYPSLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGLTVKCHLHRLASKNRI 85 Query: 275 QAWNMLRAKL 284 +A +L KL Sbjct: 86 EARKILLDKL 95 >gi|169854029|ref|XP_001833692.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130] gi|116505342|gb|EAU88237.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130] Length = 264 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 8/78 (10%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 E+ E D R SG GGQ +N T++ V++ H PTG+ V CQ+ RS +N+ A L Sbjct: 157 ELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVSCQETRSLSQNRKIARKRL- 215 Query: 282 AKLYELELQKREEIANIG 299 L+K +++AN G Sbjct: 216 -------LEKLDKLANPG 226 >gi|50545671|ref|XP_500374.1| YALI0B01144p [Yarrowia lipolytica] gi|49646240|emb|CAG82589.1| YALI0B01144p [Yarrowia lipolytica] Length = 154 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 ++ E++ R R SG GGQ +N + +ITHIPTG+VV Q+ RS +N+ A +L Sbjct: 27 KVDENEIRESFIRGSGPGGQCINRRSTRCQITHIPTGLVVSSQKTRSLEENRKIARQILA 86 Query: 282 AKLYELELQKREEIANIGESSKTEIG 307 KL ++ A G S K +G Sbjct: 87 DKLEQM-------FAPPGTSRKDVVG 105 >gi|169837781|ref|ZP_02870969.1| peptide chain release factor 1 [candidate division TM7 single-cell isolate TM7a] Length = 63 Score = 52.8 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%) Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 R+ +S R HTS ++ V P +++ +IEI+ +D +ID +R+ G GGQ VNTTDSA Sbjct: 3 RVPSTESQGRVHTSTVTVAVLPEAEET-DIEINPNDLKIDVFRSGGHGGQSVNTTDSA 59 >gi|258570383|ref|XP_002543995.1| predicted protein [Uncinocarpus reesii 1704] gi|237904265|gb|EEP78666.1| predicted protein [Uncinocarpus reesii 1704] Length = 162 Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 41/79 (51%) Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FS+ V I ES+ + SG GGQ +N T SAV++ H+PT VV+ Q Sbjct: 25 FSTFAALNVKQMPARPTIDESEITGSYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQA 84 Query: 266 ERSQHKNKAQAWNMLRAKL 284 RS+ +N+ A +L K+ Sbjct: 85 TRSRSQNRKIALQILAEKV 103 >gi|24654113|ref|NP_725560.1| CG30100 [Drosophila melanogaster] gi|21627121|gb|AAM68513.1| CG30100 [Drosophila melanogaster] gi|157816290|gb|ABV82139.1| AT22563p [Drosophila melanogaster] Length = 146 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 11/100 (11%) Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +G+ R + + P + + +S +PV + ESD R SG GGQ VN Sbjct: 3 RGLVRFLALPPTAVRCKSNLDYSR---FPV--------LQESDIEETFMRGSGPGGQAVN 51 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 T + V + H+PT + V+C R KN+ +A +L KL Sbjct: 52 KTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLEKL 91 >gi|213401645|ref|XP_002171595.1| peptide release factor [Schizosaccharomyces japonicus yFS275] gi|211999642|gb|EEB05302.1| peptide release factor [Schizosaccharomyces japonicus yFS275] Length = 144 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 39/75 (52%) Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +VYP + E+D R G GGQ +N T ++ H P+G++V+CQ+ RS+ Sbjct: 22 FVYPAFIQQRFYHLVEADLDETFIRGHGPGGQKINKTSIVCQLRHKPSGLIVRCQETRSR 81 Query: 270 HKNKAQAWNMLRAKL 284 +N+ A L KL Sbjct: 82 EQNRKIARKRLAEKL 96 >gi|206889859|ref|YP_002249325.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741797|gb|ACI20854.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM 11347] Length = 114 Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 39/68 (57%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 ++ I ESD + SG GGQ +N T + V + HIP+ + V+C +ERSQ N+ A M Sbjct: 20 KLGIKESDIEEKFIKCSGHGGQKLNKTSTGVYLKHIPSAIEVKCTKERSQGLNRFFARRM 79 Query: 280 LRAKLYEL 287 L K+ E Sbjct: 80 LVEKIKEF 87 >gi|219111103|ref|XP_002177303.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411838|gb|EEC51766.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 491 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 36/66 (54%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 E++E D R SG GGQ N T + V + H PT + V+CQ RS +N+ A LR Sbjct: 387 ELNEDDLTETFVRGSGPGGQKTNKTSNKVALLHGPTQLRVECQDTRSLQQNRKIARKRLR 446 Query: 282 AKLYEL 287 AKL E Sbjct: 447 AKLDEF 452 >gi|320037150|gb|EFW19088.1| hypothetical protein CPSG_04634 [Coccidioides posadasii str. Silveira] Length = 172 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 12/83 (14%) Query: 213 PVVDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D+S EI+ TY + SG GGQ +N T SAV++ H+PT VV+ Q RS+ + Sbjct: 41 PTIDES---EIT------GTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQ 91 Query: 272 NKAQAWNMLRAKLYELELQKREE 294 N+ A +L K+ EL LQK +E Sbjct: 92 NRKIALQILAEKV-EL-LQKGDE 112 >gi|303324301|ref|XP_003072138.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111848|gb|EER29993.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 136 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 12/83 (14%) Query: 213 PVVDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +D+S EI+ TY + SG GGQ +N T SAV++ H+PT VV+ Q RS+ + Sbjct: 5 PTIDES---EIT------GTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQ 55 Query: 272 NKAQAWNMLRAKLYELELQKREE 294 N+ A +L K+ EL LQK +E Sbjct: 56 NRKIALQILAEKV-EL-LQKGDE 76 >gi|194882555|ref|XP_001975376.1| GG20592 [Drosophila erecta] gi|190658563|gb|EDV55776.1| GG20592 [Drosophila erecta] Length = 148 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 34/62 (54%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + ESD R SG GGQ VN T + V + H+PT + V+C R KN+ +A +L Sbjct: 30 LQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLE 89 Query: 283 KL 284 KL Sbjct: 90 KL 91 >gi|295666315|ref|XP_002793708.1| hypothetical protein PAAG_04618 [Paracoccidioides brasiliensis Pb01] gi|226278002|gb|EEH33568.1| hypothetical protein PAAG_04618 [Paracoccidioides brasiliensis Pb01] Length = 175 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%) Query: 232 TY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 TY + SG GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L K+ EL L+ Sbjct: 52 TYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELHLK 110 >gi|195558953|ref|XP_002077323.1| GD20369 [Drosophila simulans] gi|194202425|gb|EDX16001.1| GD20369 [Drosophila simulans] Length = 146 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 34/62 (54%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + ESD R SG GGQ VN T + V + H+PT + V+C R KN+ +A +L Sbjct: 30 LQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLE 89 Query: 283 KL 284 KL Sbjct: 90 KL 91 >gi|302866524|ref|YP_003835161.1| peptide chain release factor H [Micromonospora aurantiaca ATCC 27029] gi|315502934|ref|YP_004081821.1| peptide chain release factor h [Micromonospora sp. L5] gi|302569383|gb|ADL45585.1| peptide chain release factor H [Micromonospora aurantiaca ATCC 27029] gi|315409553|gb|ADU07670.1| peptide chain release factor H [Micromonospora sp. L5] Length = 201 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 74/170 (43%), Gaps = 9/170 (5%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRW---AEKRKFKTEALEIHDGEEAGI-KSATLLIKG 174 L + AG G E WA L R+ +R A +R +TE +E G+ AG +S + I G Sbjct: 4 LLLSAGRGPAECA-WA--LARLLSRLEGEAARRGLRTERVETVPGDRAGTYRSVLVRITG 60 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 A + G G SPY + R + + D + E+D R Sbjct: 61 AGAEAFAAGWTGTLCWQAPSPYRTGHGRKNWYVT--ARTCRTDVVVTPFHEADVEFVPCR 118 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 G GGQH N +AVR TH P+G V ER H N+ A +LR ++ Sbjct: 119 TGGPGGQHRNKASTAVRATHRPSGRTVVVDTERHLHLNRRIAVELLRQRI 168 >gi|195334889|ref|XP_002034109.1| GM21684 [Drosophila sechellia] gi|194126079|gb|EDW48122.1| GM21684 [Drosophila sechellia] Length = 146 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 34/62 (54%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + ESD R SG GGQ VN T + V + H+PT + V+C R KN+ +A +L Sbjct: 30 LQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLE 89 Query: 283 KL 284 KL Sbjct: 90 KL 91 >gi|328791281|ref|XP_003251540.1| PREDICTED: peptide chain release factor 2-like [Apis mellifera] Length = 178 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%) Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R+ S++ Y V ++ ESD + + G GGQ N T +A+ + H PTG+VV Sbjct: 55 RYKSYTRFLDYSRVP-----KLEESDLQEQFVKGCGPGGQATNKTSNAIVLKHKPTGLVV 109 Query: 262 QCQQERSQHKNKAQAWNMLRAKL 284 +C + RS +N+ A +L +L Sbjct: 110 KCHETRSLDQNRKIARKILLTRL 132 >gi|261196175|ref|XP_002624491.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081] gi|239587624|gb|EEQ70267.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081] Length = 196 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 + +G GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L A+ EL+L+ + Sbjct: 48 KGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL-AEKVELQLKGEK 106 Query: 294 EIANIGESSK 303 A I +K Sbjct: 107 SRAAIKAETK 116 >gi|327355568|gb|EGE84425.1| peptidyl-tRNA hydrolase domain-containing protein [Ajellomyces dermatitidis ATCC 18188] Length = 184 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 + +G GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L A+ EL+L+ + Sbjct: 48 KGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL-AEKVELQLKGEK 106 Query: 294 EIANIGESSK 303 A I +K Sbjct: 107 SRAAIKAETK 116 >gi|149179343|ref|ZP_01857902.1| hypothetical protein PM8797T_29083 [Planctomyces maris DSM 8797] gi|148841815|gb|EDL56219.1| hypothetical protein PM8797T_29083 [Planctomyces maris DSM 8797] Length = 179 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 33/58 (56%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +C+I+ R SG GGQH N ++ V I HIPT + + R Q +N++ A LR L Sbjct: 28 NCQIEQVRRSGPGGQHRNKVETGVVIKHIPTNFTGEASERRQQGRNRSMALFRLRVNL 85 >gi|195488245|ref|XP_002092233.1| GE11778 [Drosophila yakuba] gi|194178334|gb|EDW91945.1| GE11778 [Drosophila yakuba] Length = 146 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 34/62 (54%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + ESD R SG GGQ VN T + V + H+PT + V+C R KN+ +A +L Sbjct: 30 LQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLLE 89 Query: 283 KL 284 KL Sbjct: 90 KL 91 >gi|239614579|gb|EEQ91566.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3] Length = 196 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 + +G GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L K+ EL+L+ + Sbjct: 48 KGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELQLKGEK 106 Query: 294 EIANIGESSK 303 A I +K Sbjct: 107 SRAAIKAETK 116 >gi|225683891|gb|EEH22175.1| predicted protein [Paracoccidioides brasiliensis Pb03] Length = 247 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%) Query: 232 TY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 TY + SG GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L K+ EL L+ Sbjct: 124 TYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELHLK 182 >gi|226293278|gb|EEH48698.1| hypothetical protein PADG_04777 [Paracoccidioides brasiliensis Pb18] Length = 177 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%) Query: 232 TY-RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 TY + SG GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L K+ EL L+ Sbjct: 52 TYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELHLK 110 >gi|50287521|ref|XP_446190.1| hypothetical protein [Candida glabrata CBS 138] gi|49525497|emb|CAG59114.1| unnamed protein product [Candida glabrata] Length = 187 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 10/104 (9%) Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P D S+E +I E + +G GGQ +N +S V+I H+P+ +VV CQ RS+ +N Sbjct: 41 PKFDASMEADIEEKFL----HGGTGPGGQKINKCNSKVQIKHVPSNIVVTCQATRSRDQN 96 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTE-----IGWGRQ 311 + A L +L +L + E+ N G TE + W RQ Sbjct: 97 RKIAREKLALELERWQLGQ-EKDGNSGVQVMTEREQALLEWKRQ 139 >gi|154277694|ref|XP_001539684.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150413269|gb|EDN08652.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 187 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 + +G GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L K+ EL+L+ Sbjct: 48 KGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELQLK 103 >gi|197927088|ref|NP_001102535.2| hypothetical protein LOC498179 [Rattus norvegicus] gi|195539878|gb|AAI68187.1| RGD1563482 protein [Rattus norvegicus] Length = 181 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP + + ++ES+ + G GGQ N T + V + H+P+G+VV+C Q RS + Sbjct: 49 YPAL-----LPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQ 103 Query: 272 NKAQAWNMLRAKL 284 N+ A +L+ K+ Sbjct: 104 NRKMARKILQEKV 116 >gi|168011647|ref|XP_001758514.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690124|gb|EDQ76492.1| predicted protein [Physcomitrella patens subsp. patens] Length = 282 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 13/54 (24%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 CR++T R+SG GGQH NTT+SA ++RSQHKN+A+A+ LR Sbjct: 132 CRVETLRSSGPGGQHRNTTESAA-------------AEDRSQHKNRAKAFKRLR 172 >gi|50304901|ref|XP_452406.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641539|emb|CAH01257.1| KLLA0C04642p [Kluyveromyces lactis] Length = 168 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 S + P D +E +I E + G GGQ +N +S V++ H+PTG+VV CQ Sbjct: 32 SKMPPRPKFTDDMERDIEEKFL----HGGRGPGGQKINKCNSKVQLRHVPTGIVVDCQAT 87 Query: 267 RSQHKNKAQAWNMLRAKLYELE 288 RS+ +N+ A L +L + E Sbjct: 88 RSRDQNRKIAREKLALRLAQWE 109 >gi|332375198|gb|AEE62740.1| unknown [Dendroctonus ponderosae] Length = 139 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%) Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 +P +D E D R SG GG ++TT S V + HIPTG+VV+CQ+ R Sbjct: 28 CFPTLD--------ECDLEEQHIRGSGPGGSKISTTCSCVLLKHIPTGLVVKCQETRFLE 79 Query: 271 KNKAQAWNMLRAKL 284 +N+ +A L KL Sbjct: 80 QNRKRARLNLLTKL 93 >gi|149063270|gb|EDM13593.1| rCG21417, isoform CRA_a [Rattus norvegicus] Length = 220 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP + + ++ES+ + G GGQ N T + V + H+P+G+VV+C Q RS + Sbjct: 88 YPAL-----LPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQ 142 Query: 272 NKAQAWNMLRAKL 284 N+ A +L+ K+ Sbjct: 143 NRKMARKILQEKV 155 >gi|149633371|ref|XP_001507092.1| PREDICTED: similar to My030 protein [Ornithorhynchus anatinus] Length = 217 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 38/62 (61%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 ++ES+ + G GGQ N T + V + HIP+G+VV+C Q RS +N+ +A +L+ Sbjct: 99 LNESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKKAREILQE 158 Query: 283 KL 284 K+ Sbjct: 159 KV 160 >gi|260785096|ref|XP_002587599.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae] gi|229272748|gb|EEN43610.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae] Length = 177 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 32/51 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R G GGQ N T++ V + H+PTG+VV+C Q RS +N+ A +R KL Sbjct: 77 RGWGPGGQATNKTNNCVLLKHVPTGIVVKCHQTRSLDENRKIARQHMREKL 127 >gi|240280457|gb|EER43961.1| conserved hypothetical protein [Ajellomyces capsulatus H143] Length = 186 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 + +G GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L K+ EL+L+ Sbjct: 48 KGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELQLK 103 >gi|126324306|ref|XP_001375022.1| PREDICTED: similar to RIKEN cDNA 2810006K23 gene [Monodelphis domestica] Length = 212 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ++E D + G GGQ N T + V + HIP+G+VV+C Q RS +N+ A +L Sbjct: 92 LPLNERDLEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLAREIL 151 Query: 281 RAKL 284 + K+ Sbjct: 152 QGKV 155 >gi|221101663|ref|XP_002163246.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 159 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 36/62 (58%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + ESD + + SG GGQ +N T + V + H TG++V+CQ+ RS +N+ A L Sbjct: 56 LKESDFQEKFIKGSGPGGQKINKTSNCVELKHDATGIIVKCQETRSLERNRVIARERLLE 115 Query: 283 KL 284 KL Sbjct: 116 KL 117 >gi|256085783|ref|XP_002579092.1| hypothetical protein [Schistosoma mansoni] gi|238664498|emb|CAZ35331.1| conserved hypothetical protein [Schistosoma mansoni] Length = 155 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 13/92 (14%) Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +SP+ + R H+ + W++ E ++SE SG GGQ +N T + V + Sbjct: 13 LSPHHFSLRFHSK--NQWLFN------ECDLSEM-----AVLGSGPGGQSINKTANCVVL 59 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 HIPTG+VV+CQ R +N+ A L KL Sbjct: 60 KHIPTGIVVKCQDSRELERNRILARQRLNDKL 91 >gi|254582148|ref|XP_002497059.1| ZYRO0D14476p [Zygosaccharomyces rouxii] gi|238939951|emb|CAR28126.1| ZYRO0D14476p [Zygosaccharomyces rouxii] Length = 155 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Query: 225 ESDCRID-TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ES C + G GGQ +N +S V++ H+PTG+VV+CQQ RS+ +N+ A L Sbjct: 31 ESQCEEKFLHGGRGPGGQKINKCNSKVQLKHLPTGIVVECQQTRSRDQNRKIAREKL 87 >gi|45201377|ref|NP_986947.1| AGR281Cp [Ashbya gossypii ATCC 10895] gi|44986311|gb|AAS54771.1| AGR281Cp [Ashbya gossypii ATCC 10895] Length = 176 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 13/78 (16%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ +N +S V++ H+P+G+V++CQ RS+ +N+ A L A L + Sbjct: 63 GPGGQKINKCNSKVQLRHVPSGIVIECQATRSREQNRKLAREKLAAALAQ---------- 112 Query: 297 NIGESSKTEIG---WGRQ 311 G +S+ E+ W RQ Sbjct: 113 PPGSASERELALRTWARQ 130 >gi|198456857|ref|XP_001360468.2| GA15649 [Drosophila pseudoobscura pseudoobscura] gi|198135777|gb|EAL25043.2| GA15649 [Drosophila pseudoobscura pseudoobscura] Length = 181 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 38/70 (54%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D S ++ ES+ R SG GGQ VN T + V + H+PT + ++C R KN+ Sbjct: 61 LDYSRYPKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRV 120 Query: 275 QAWNMLRAKL 284 +A +L KL Sbjct: 121 EARKLLLDKL 130 >gi|195150095|ref|XP_002015990.1| GL10726 [Drosophila persimilis] gi|194109837|gb|EDW31880.1| GL10726 [Drosophila persimilis] Length = 181 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 38/70 (54%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D S ++ ES+ R SG GGQ VN T + V + H+PT + ++C R KN+ Sbjct: 61 LDYSRYPKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRV 120 Query: 275 QAWNMLRAKL 284 +A +L KL Sbjct: 121 EARKLLLDKL 130 >gi|298713472|emb|CBJ27027.1| conserved unknown protein [Ectocarpus siliculosus] Length = 191 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 31/51 (60%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + SG GGQ +N + V++TH+P+GV V CQ R H N+ A L+ K+ Sbjct: 48 KGSGPGGQKINKVRNCVQLTHVPSGVSVSCQDSRELHANRHIARKRLKEKV 98 >gi|194757281|ref|XP_001960893.1| GF13589 [Drosophila ananassae] gi|190622191|gb|EDV37715.1| GF13589 [Drosophila ananassae] Length = 141 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 37/70 (52%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D S + ESD R SG GGQ VN T + V + H+PT + ++C R KN+ Sbjct: 24 LDYSRYPTLQESDIEETFTRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRV 83 Query: 275 QAWNMLRAKL 284 +A +L KL Sbjct: 84 EARKLLLEKL 93 >gi|71022895|ref|XP_761677.1| hypothetical protein UM05530.1 [Ustilago maydis 521] gi|46101154|gb|EAK86387.1| hypothetical protein UM05530.1 [Ustilago maydis 521] Length = 713 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 33/56 (58%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + + E D R SG GGQ +N + V++TH+PTG V CQ+ RS+ +N+ A Sbjct: 598 LTLDEKDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGTKVTCQETRSRDRNRELA 653 >gi|116328132|ref|YP_797852.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331415|ref|YP_801133.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120876|gb|ABJ78919.1| Peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125104|gb|ABJ76375.1| Peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 154 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 39/66 (59%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +E+ E++ R+ G GGQ+VN +AV + H PTG+ V+C R+Q N+ +A +L Sbjct: 22 LEVKENELEESFTRSGGKGGQNVNKVSTAVHLKHKPTGIEVKCSLYRTQGLNRYKARAIL 81 Query: 281 RAKLYE 286 K+ E Sbjct: 82 CEKIQE 87 >gi|255718823|ref|XP_002555692.1| KLTH0G15158p [Lachancea thermotolerans] gi|238937076|emb|CAR25255.1| KLTH0G15158p [Lachancea thermotolerans] Length = 155 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 4/68 (5%) Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P + +E E+ E + G GGQ +N +S V++ H+P+G+VV+CQ+ RS+ +N Sbjct: 26 PKLSTQMETELEEKF----LHGGRGPGGQKINKCNSKVQLKHLPSGIVVECQETRSRDQN 81 Query: 273 KAQAWNML 280 + A L Sbjct: 82 RKLAREKL 89 >gi|56784339|dbj|BAD82360.1| unknown protein [Oryza sativa Japonica Group] gi|56785244|dbj|BAD82132.1| unknown protein [Oryza sativa Japonica Group] Length = 137 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 19/35 (54%), Positives = 26/35 (74%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 C + T++ASG GGQH N +SAVR+ H PTG++ Q Sbjct: 86 CEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQ 120 >gi|297621679|ref|YP_003709816.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044] gi|297376980|gb|ADI38810.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044] Length = 139 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 32/52 (61%) Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 SG GGQ VN T S V + H P+G+ ++CQ ERS+ N+ A +L K+ E Sbjct: 32 GSGKGGQKVNKTASCVYLKHEPSGIEIKCQLERSRELNRFYARRLLCEKIEE 83 >gi|74198326|dbj|BAB28408.3| unnamed protein product [Mus musculus] Length = 142 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 43/78 (55%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 S++ V D + ++ES+ + G GGQ N T + V + H+P+G+VV+C Q Sbjct: 42 STVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQT 101 Query: 267 RSQHKNKAQAWNMLRAKL 284 RS +N+ A +L+ K+ Sbjct: 102 RSVDQNRKIARKVLQEKV 119 >gi|197927090|ref|NP_001128189.1| probable peptide chain release factor C12orf65 homolog, mitochondrial isoform a [Mus musculus] gi|81895172|sp|Q80VP5|CL065_MOUSE RecName: Full=Probable peptide chain release factor C12orf65 homolog, mitochondrial; Flags: Precursor gi|28422444|gb|AAH46909.1| RIKEN cDNA 2810006K23 gene [Mus musculus] gi|148687649|gb|EDL19596.1| RIKEN cDNA 2810006K23, isoform CRA_b [Mus musculus] Length = 184 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP + + ++ES+ + G GGQ N T + V + H+P+G+VV+C Q RS + Sbjct: 52 YPAL-----LPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQ 106 Query: 272 NKAQAWNMLRAKL 284 N+ A +L+ K+ Sbjct: 107 NRKIARKVLQEKV 119 >gi|193599082|ref|XP_001946758.1| PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial-like isoform 1 [Acyrthosiphon pisum] gi|328703300|ref|XP_003242163.1| PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial-like [Acyrthosiphon pisum] gi|328703303|ref|XP_003242164.1| PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial-like [Acyrthosiphon pisum] Length = 150 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 3/102 (2%) Query: 190 LVRISPYDSNSRRHTSFSSIWVY---PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 L + P+++NS ++ S+ ++ +D S I+E++ + SG GG VN Sbjct: 5 LCKALPFNTNSVKNARSISLTLFNKKQTIDRSKVPIINENELEEMFVKGSGPGGSAVNKN 64 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 + V + H PTG+V++C + R N+ A L KL +E Sbjct: 65 ANCVVLKHKPTGIVIKCHESRCVEDNRKMAREKLAIKLDVIE 106 >gi|74180243|dbj|BAE24439.1| unnamed protein product [Mus musculus] Length = 152 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP + + ++ES+ + G GGQ N T + V + H+P+G+VV+C Q RS + Sbjct: 52 YPAL-----LPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQ 106 Query: 272 NKAQAWNMLRAKL 284 N+ A +L+ K+ Sbjct: 107 NRKIARKVLQEKV 119 >gi|121730460|ref|ZP_01682775.1| conserved domain protein [Vibrio cholerae V52] gi|121627803|gb|EAX60412.1| conserved domain protein [Vibrio cholerae V52] Length = 156 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 4/92 (4%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE-SLLSGEADSND---AYLEVHA 123 ++L+ E +EDD + + D ++ K +E E +L D ND +LE+ A Sbjct: 60 EDLVAAEEMAQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRA 119 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 GAGG E+ +A L RMY+R+AEK+ ++ E + Sbjct: 120 GAGGDEAGIFAGDLFRMYSRFAEKKGWRIEVM 151 >gi|291414256|ref|XP_002723382.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus] Length = 165 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 37/63 (58%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 + E++ R + G GGQ N T + V + H+P+G+VV+C Q RS +N+ A +L+ Sbjct: 54 PLDENELREQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKLARRILQ 113 Query: 282 AKL 284 K+ Sbjct: 114 EKV 116 >gi|6323311|ref|NP_013383.1| hypothetical protein YLR281C [Saccharomyces cerevisiae S288c] gi|74676369|sp|Q05863|YL281_YEAST RecName: Full=Uncharacterized peptide chain release factor-like protein YLR281C, mitochondrial; Flags: Precursor gi|596041|gb|AAB67327.1| Ylr281cp [Saccharomyces cerevisiae] gi|45269753|gb|AAS56257.1| YLR281C [Saccharomyces cerevisiae] gi|151940986|gb|EDN59367.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|190405338|gb|EDV08605.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi|256269833|gb|EEU05093.1| YLR281C-like protein [Saccharomyces cerevisiae JAY291] gi|259148263|emb|CAY81510.1| EC1118_1L7_1343p [Saccharomyces cerevisiae EC1118] gi|285813696|tpg|DAA09592.1| TPA: hypothetical protein YLR281C [Saccharomyces cerevisiae S288c] Length = 155 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 G GGQ +N +S V++ H PTG+VV+CQ+ RS+ +N+ A Sbjct: 47 GPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLA 86 >gi|170094760|ref|XP_001878601.1| predicted protein [Laccaria bicolor S238N-H82] gi|164647055|gb|EDR11300.1| predicted protein [Laccaria bicolor S238N-H82] Length = 294 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 36/66 (54%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 E+ E D R SG GGQ +N T++ V++ H PTG+ V CQ RS N+ A L Sbjct: 185 ELREEDLEETFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQDTRSLSLNRKLARRWLL 244 Query: 282 AKLYEL 287 KL +L Sbjct: 245 EKLDKL 250 >gi|24214865|ref|NP_712346.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str. 56601] gi|24195884|gb|AAN49364.1| peptidyl-tRNA hydrolase involved in peptide chain release [Leptospira interrogans serovar Lai str. 56601] Length = 155 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 39/67 (58%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++I E++ R+ G GGQ+VN +AV + H PTG+ V+C R+Q N+ +A +L Sbjct: 22 LQIKETELEESFTRSGGKGGQNVNKVSTAVHLRHKPTGIEVKCSLYRTQGLNRYKARAIL 81 Query: 281 RAKLYEL 287 K+ + Sbjct: 82 CEKIRDF 88 >gi|313004791|emb|CAE17950.2| C. elegans protein T23B5.4a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 133 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 10/103 (9%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 ++ + DC G GGQ VNT +AV++TH+PTG V++ + R KN A+ ++ Sbjct: 26 DVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMK 85 Query: 282 AKL---------YELELQKREEIANIGESSKTEIGWGRQIRSY 315 L YE +L KR +IA +S+K + ++ SY Sbjct: 86 FVLDRQINGENCYEEQL-KRLQIAKEEKSNKRRVQARKEKESY 127 >gi|302800437|ref|XP_002981976.1| hypothetical protein SELMODRAFT_421349 [Selaginella moellendorffii] gi|300150418|gb|EFJ17069.1| hypothetical protein SELMODRAFT_421349 [Selaginella moellendorffii] Length = 208 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 1/59 (1%) Query: 196 YDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++S R SF+ + V P++++S IE+E+ + D I T R+ G GGQ+V ++AVR++ Sbjct: 145 FNSKGLRQMSFAGVEVMPLLEESEIEVELPDGDLEITTRRSGGKGGQNVKKVETAVRVS 203 >gi|296213216|ref|XP_002753183.1| PREDICTED: uncharacterized protein C12orf65-like [Callithrix jacchus] Length = 170 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 32/51 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + G GGQ N T + V + HIP+G+VV+C Q RS +N+ A +L+ K+ Sbjct: 66 KGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKV 116 >gi|213423387|ref|ZP_03356375.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 62 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 34/61 (55%) Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ +S Sbjct: 1 YSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQG 60 Query: 201 R 201 R Sbjct: 61 R 61 >gi|296814610|ref|XP_002847642.1| peptidyl-tRNA hydrolase domain-containing protein [Arthroderma otae CBS 113480] gi|238840667|gb|EEQ30329.1| peptidyl-tRNA hydrolase domain-containing protein [Arthroderma otae CBS 113480] Length = 247 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 56/142 (39%), Gaps = 45/142 (31%) Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A G K G R R SP + + P +DDS EIS S + S Sbjct: 46 AQGRFKQHVGDVRFFRTSP-------PAAVKQMPPRPTIDDS---EISGS-----YLKGS 90 Query: 237 GAGGQHVN------------------------------TTDSAVRITHIPTGVVVQCQQE 266 G GGQ +N T+SAV++ HIPT VV+CQ Sbjct: 91 GPGGQKINEYFNKKKYPILYSKLIIHEHPYSAEDKCQNKTNSAVQLIHIPTNTVVKCQAT 150 Query: 267 RSQHKNKAQAWNMLRAKLYELE 288 RSQ +N+ A +L K+ LE Sbjct: 151 RSQSQNRKIAKQILAEKVELLE 172 >gi|45657623|ref|YP_001709.1| peptide chain release factor 2-like protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600863|gb|AAS70346.1| peptide chain release factor 2-like protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 155 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 39/67 (58%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++I E++ R+ G GGQ+VN +AV + H PTG+ V+C R+Q N+ +A +L Sbjct: 22 LQIKETELEESFTRSGGKGGQNVNKVSTAVHLRHKPTGIEVKCSLYRTQGLNRYKARAIL 81 Query: 281 RAKLYEL 287 K+ + Sbjct: 82 CEKIQDF 88 >gi|187736226|ref|YP_001878338.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835] gi|187426278|gb|ACD05557.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835] Length = 120 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 30/51 (58%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 I E D R SG GGQ VN T++ V + H PTG+ V+C +RS+ N+ Sbjct: 19 IREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCHADRSRELNR 69 >gi|68061541|ref|XP_672770.1| peptide release factor [Plasmodium berghei strain ANKA] gi|56490109|emb|CAI01539.1| peptide release factor, putative [Plasmodium berghei] Length = 210 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 4/102 (3%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GI-KSATL 170 DSN+ LE+ G GG E++ +AN L MY + + + ++ EE GI K+ Sbjct: 86 DSNEVRLEIVPGVGGQEAKMFANELFSMYEHFCKLKNYECLIKNNKLCEEGKGIYKNIVA 145 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 IKG Y E G+HR+ RI P +S + TS S + ++ Sbjct: 146 YIKGEGVYVDFIQEIGIHRVQRI-PINS-KKMQTSTSIVLLF 185 >gi|55639161|ref|XP_509459.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 5 [Pan troglodytes] gi|114647627|ref|XP_001169334.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 1 [Pan troglodytes] gi|114647629|ref|XP_001169362.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] gi|114647631|ref|XP_001169383.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 3 [Pan troglodytes] gi|114647633|ref|XP_001169404.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] gi|332840720|ref|XP_003314049.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like [Pan troglodytes] gi|332840723|ref|XP_003314050.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like [Pan troglodytes] Length = 166 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%) Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP + + + E++ + G GGQ N T + V + HIP+G+VV+C Q RS + Sbjct: 49 YPAL-----LSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQ 103 Query: 272 NKAQAWNMLRAKL 284 N+ A +L+ K+ Sbjct: 104 NRKLARKILQEKV 116 >gi|297693336|ref|XP_002823974.1| PREDICTED: uncharacterized protein C12orf65-like isoform 1 [Pongo abelii] gi|297693338|ref|XP_002823975.1| PREDICTED: uncharacterized protein C12orf65-like isoform 2 [Pongo abelii] gi|297693340|ref|XP_002823976.1| PREDICTED: uncharacterized protein C12orf65-like isoform 3 [Pongo abelii] gi|297693342|ref|XP_002823977.1| PREDICTED: uncharacterized protein C12orf65-like isoform 4 [Pongo abelii] gi|297693344|ref|XP_002823978.1| PREDICTED: uncharacterized protein C12orf65-like isoform 5 [Pongo abelii] Length = 166 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 32/51 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + G GGQ N T + V + HIP+G+VV+C Q RS +N+ A +L+ K+ Sbjct: 66 KGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKV 116 >gi|22748627|ref|NP_689482.1| probable peptide chain release factor C12orf65, mitochondrial [Homo sapiens] gi|219879802|ref|NP_001137377.1| probable peptide chain release factor C12orf65, mitochondrial [Homo sapiens] gi|303304971|ref|NP_001181924.1| probable peptide chain release factor C12orf65, mitochondrial [Homo sapiens] gi|74733574|sp|Q9H3J6|CL065_HUMAN RecName: Full=Probable peptide chain release factor C12orf65, mitochondrial; Flags: Precursor gi|12002002|gb|AAG43144.1|AF061733_1 My030 protein [Homo sapiens] gi|17390320|gb|AAH18145.1| Chromosome 12 open reading frame 65 [Homo sapiens] gi|21755354|dbj|BAC04665.1| unnamed protein product [Homo sapiens] gi|38382804|gb|AAH62329.1| Chromosome 12 open reading frame 65 [Homo sapiens] gi|119618802|gb|EAW98396.1| hypothetical protein FLJ38663, isoform CRA_b [Homo sapiens] gi|312152346|gb|ADQ32685.1| chromosome 12 open reading frame 65 [synthetic construct] Length = 166 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 32/51 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + G GGQ N T + V + HIP+G+VV+C Q RS +N+ A +L+ K+ Sbjct: 66 KGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKV 116 >gi|332254315|ref|XP_003276272.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 1 [Nomascus leucogenys] gi|332254317|ref|XP_003276273.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 2 [Nomascus leucogenys] gi|332254319|ref|XP_003276274.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 3 [Nomascus leucogenys] gi|332254321|ref|XP_003276275.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 4 [Nomascus leucogenys] Length = 166 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%) Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YP + + + E++ + G GGQ N T + V + HIP+G+VV+C Q RS + Sbjct: 49 YPAL-----LSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQ 103 Query: 272 NKAQAWNMLRAKL 284 N+ A +L+ K+ Sbjct: 104 NRKLARKILQEKV 116 >gi|54293184|ref|YP_125599.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens] gi|53753016|emb|CAH14459.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens] Length = 136 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 37/64 (57%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + I E+D +SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+ N+ A L Sbjct: 17 LHIYETDLSEKFILSSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76 Query: 281 RAKL 284 KL Sbjct: 77 CEKL 80 >gi|164655297|ref|XP_001728779.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966] gi|159102663|gb|EDP41565.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966] Length = 248 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 35/66 (53%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + I++ E D R R SG GGQ +N + V + HIPT + CQ RS+ +N+ A Sbjct: 126 MPIDLDERDIRERFIRGSGPGGQAINKLSTNVELVHIPTSTRITCQLTRSRAQNRELARR 185 Query: 279 MLRAKL 284 L +L Sbjct: 186 QLSQRL 191 >gi|56753039|gb|AAW24729.1| SJCHGC03759 protein [Schistosoma japonicum] Length = 163 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 30/51 (58%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R G GGQ +NTT + V + H PTG++V+CQ R KN+ A L KL Sbjct: 51 RGWGPGGQSINTTANCVVLKHEPTGIMVKCQDSRELEKNRELARRRLNDKL 101 >gi|61886963|ref|XP_584238.1| PREDICTED: chromosome 12 open reading frame 65 ortholog [Bos taurus] gi|297484729|ref|XP_002694521.1| PREDICTED: chromosome 12 open reading frame 65 ortholog [Bos taurus] gi|296478551|gb|DAA20666.1| chromosome 12 open reading frame 65 ortholog [Bos taurus] Length = 172 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 32/51 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + G GGQ N T + V + H+P+G+VV+C Q RS +N+ A +L+ K+ Sbjct: 66 KGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQEKV 116 >gi|52840422|ref|YP_094221.1| peptide chain release factor [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627533|gb|AAU26274.1| peptide chain release factor [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 136 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 36/64 (56%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + I E+D SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+ N+ A L Sbjct: 17 LHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76 Query: 281 RAKL 284 KL Sbjct: 77 CEKL 80 >gi|194042870|ref|XP_001928322.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like [Sus scrofa] Length = 202 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 32/51 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + G GGQ N T + V + HIP+G+VV+C Q RS +N+ A +L+ K+ Sbjct: 66 KGHGPGGQATNKTSNCVVLRHIPSGIVVKCHQTRSVDQNRKLARRILQEKV 116 >gi|54296203|ref|YP_122572.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris] gi|53749988|emb|CAH11376.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris] Length = 136 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 36/64 (56%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + I E+D SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+ N+ A L Sbjct: 17 LHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76 Query: 281 RAKL 284 KL Sbjct: 77 CEKL 80 >gi|148358384|ref|YP_001249591.1| peptide chain release factor [Legionella pneumophila str. Corby] gi|296105734|ref|YP_003617434.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy] gi|148280157|gb|ABQ54245.1| peptide chain release factor [Legionella pneumophila str. Corby] gi|295647635|gb|ADG23482.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy] Length = 136 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 36/64 (56%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + I E+D SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+ N+ A L Sbjct: 17 LHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRL 76 Query: 281 RAKL 284 KL Sbjct: 77 CEKL 80 >gi|154757477|gb|AAI51776.1| C17H12ORF65 protein [Bos taurus] Length = 143 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 32/51 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + G GGQ N T + V + H+P+G+VV+C Q RS +N+ A +L+ K+ Sbjct: 66 KGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQEKV 116 >gi|268537314|ref|XP_002633793.1| Hypothetical protein CBG03485 [Caenorhabditis briggsae] gi|187036700|emb|CAP24377.1| hypothetical protein CBG_03485 [Caenorhabditis briggsae AF16] Length = 137 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 34/63 (53%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 E+ + DC G GGQ VNT +AV++TH PTG VV+ + R KN A+ ++ Sbjct: 26 EVKKDDCEQKYISGWGPGGQKVNTAQNAVQLTHRPTGTVVKVHESRLLPKNIEIAFERMK 85 Query: 282 AKL 284 L Sbjct: 86 VVL 88 >gi|73995153|ref|XP_543374.2| PREDICTED: similar to CG30100-PA [Canis familiaris] Length = 440 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 36/62 (58%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + ES+ + G GGQ N T + V + HIP+G+VV+C Q RS +N+ A +L+ Sbjct: 329 LDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARQILQE 388 Query: 283 KL 284 K+ Sbjct: 389 KV 390 >gi|108763642|ref|YP_629741.1| ClpA/B family protein [Myxococcus xanthus DK 1622] gi|108467522|gb|ABF92707.1| ClpA/B family protein [Myxococcus xanthus DK 1622] Length = 966 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 11/171 (6%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QR + L +T+ P+LW + A ++R + ++ ++ ++ ++ L L E Sbjct: 664 QRRAELLAETQAPNLWDDPTRAAEVIRAFRTVEAQLNELERLE---AAGLFARRLVREAK 720 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQDWANMLL 138 + L + ++ + EV+ E+L + A + D A +++ A W L Sbjct: 721 NEVQLGSAARQVEDVAREVQMA--EALHASGATTQDTEALVDICASDSVEAQATWVQELA 778 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 MY WA++R ++ A+ + + I GP AYG+L GE G+HR Sbjct: 779 TMYLGWAQRRGYEAVAVAEAEEP----SRVVVRIAGPGAYGFLAGEAGMHR 825 >gi|281358821|ref|ZP_06245294.1| Class I peptide chain release factor [Victivallis vadensis ATCC BAA-548] gi|281314710|gb|EFA98750.1| Class I peptide chain release factor [Victivallis vadensis ATCC BAA-548] Length = 160 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%) Query: 216 DDSIEIEIS--ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 DD ++++ S + C ++ ++ SG GGQ N T SAVR+ + ERSQH+N+ Sbjct: 5 DDFLKLDDSALSACCELEFFKGSGNGGQKRNKTSSAVRVHLKAFDLSASDCTERSQHRNR 64 Query: 274 AQAWNMLRAKLYELELQKREEIANIGE 300 A A LR + L L RE A E Sbjct: 65 ANALAKLR---HSLALTVRETPAEPPE 88 >gi|194214381|ref|XP_001492966.2| PREDICTED: similar to My030 protein [Equus caballus] Length = 166 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 32/51 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + G GGQ N T + V + H+P+G+VV+C Q RS +N+ A +L+ K+ Sbjct: 66 KGHGPGGQATNKTSNCVVLKHMPSGIVVKCHQTRSVDQNRKLARKILQEKV 116 >gi|71994442|ref|NP_001023399.1| hypothetical protein T23B5.4 [Caenorhabditis elegans] Length = 125 Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL---------YEL 287 G GGQ VNT +AV++TH+PTG V++ + R KN A+ ++ L YE Sbjct: 33 GPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMKFVLDRQINGENCYEE 92 Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSY 315 +L KR +IA +S+K + ++ SY Sbjct: 93 QL-KRLQIAKEEKSNKRRVQARKEKESY 119 >gi|162312297|ref|NP_596474.2| peptide release factor [Schizosaccharomyces pombe 972h-] gi|212288570|sp|Q9Y811|YONI_SCHPO RecName: Full=Uncharacterized peptide chain release factor-like protein C1105.18c, mitochondrial; Flags: Precursor gi|157310457|emb|CAB50981.2| peptide release factor [Schizosaccharomyces pombe] Length = 162 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 31/54 (57%) Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 G GGQ +N T ++ HIPTG++V+ Q RS+ +N+ A L K+ E + Sbjct: 59 GKGPGGQKINKTSIVAQVKHIPTGIIVRSQDTRSREQNRCIARKRLTEKVDEFK 112 >gi|313004792|emb|CBY25203.1| C. elegans protein T23B5.4b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 149 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL---------YEL 287 G GGQ VNT +AV++TH+PTG V++ + R KN A+ ++ L YE Sbjct: 57 GPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMKFVLDRQINGENCYEE 116 Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSY 315 +L KR +IA +S+K + ++ SY Sbjct: 117 QL-KRLQIAKEEKSNKRRVQARKEKESY 143 >gi|311992638|ref|YP_004009506.1| hypothetical protein Ac42p144 [Acinetobacter phage Ac42] gi|298684421|gb|ADI96382.1| hypothetical protein Ac42p144 [Acinetobacter phage Ac42] Length = 64 Score = 45.8 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I D I+++R + G ++N VRITH P+G V + ++RS H N+A A+ +LR Sbjct: 2 IKAEDLLIESFRTE-SQGHYLNAYPKGVRITHKPSGKVFESSEQRSPHLNRAVAFKLLRD 60 Query: 283 KLYE 286 + E Sbjct: 61 EFPE 64 >gi|221133060|ref|XP_002169670.1| PREDICTED: similar to peptide chain release factor, putative, partial [Hydra magnipapillata] Length = 171 Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 35/62 (56%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D +A LEV AG GG E+ +A +L RMY R+A + ++ E + + D IK A+ I Sbjct: 108 DERNAILEVRAGTGGEEAGLFAAVLFRMYQRYAANKGWRFEIIAMSDTGLGAIKEASASI 167 Query: 173 KG 174 G Sbjct: 168 SG 169 >gi|295798158|emb|CAX69014.1| peptide chain release factor class A (=1), fragment [uncultured bacterium] Length = 170 Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 15/130 (11%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 ++ I E D R+ G GGQ++N + V + H +G+ ++CQ +R+Q N+ A + Sbjct: 50 QLGIREPDLEERFVRSRGPGGQNINKVSTCVYLKHRTSGIEIKCQSQRTQSANRIAARAL 109 Query: 280 LRAKLYELELQKREEIANIGESSKTE---IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 L +K+ +E A + + K + I R+ R+ + K +R N E+ S Sbjct: 110 LVSKIE-------QEAAALSQRQKKQRFLIERARRTRTISAK-----KKVRENKERKSQK 157 Query: 337 DVLDGDLDDF 346 L L + Sbjct: 158 KSLRRRLSGY 167 >gi|301631267|ref|XP_002944721.1| PREDICTED: uncharacterized 15.2 kDa protein in pcaJ 3'region-like [Xenopus (Silurana) tropicalis] Length = 140 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 32/142 (22%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTGV--------- 259 + + +++ E + +I RA GAGGQ+VN SAV + + +P V Sbjct: 1 MGSAFPLQVPEHEVQITAMRAQGAGGQNVNKVSSAVHLRFDITASSLPLPVQQRLLALRD 60 Query: 260 ---------VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIGWG 309 +++ QQ RSQ N+A AW L A + + + R A +S+ G Sbjct: 61 GRITQDGVLIIKAQQHRSQELNRADAWARLLALVNSVAVPPRARRATRPTLASQQRRREG 120 Query: 310 RQIRSYVLQPYQMVKDLRTNIE 331 +++RS VK LR +E Sbjct: 121 KRLRSA-------VKALRGRVE 135 >gi|118396926|ref|XP_001030799.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena thermophila] gi|89285114|gb|EAR83136.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena thermophila SB210] Length = 636 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 33/72 (45%) Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P + I+ +I E D + SG GGQ VN T + + H PTG+ V+ R KN Sbjct: 512 PQKKERIKPQIDEKDLEWKFVKGSGPGGQSVNKTSNNAVLIHKPTGIQVRSHASRELDKN 571 Query: 273 KAQAWNMLRAKL 284 K L KL Sbjct: 572 KQYCMKQLSEKL 583 >gi|308481019|ref|XP_003102715.1| hypothetical protein CRE_29955 [Caenorhabditis remanei] gi|308260801|gb|EFP04754.1| hypothetical protein CRE_29955 [Caenorhabditis remanei] Length = 162 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 26/41 (63%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 E+ + DC G GGQ VNT +AV++TH+PTG V++ Sbjct: 26 EVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLK 66 >gi|296423832|ref|XP_002841456.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637696|emb|CAZ85647.1| unnamed protein product [Tuber melanosporum] Length = 237 Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 34/58 (58%) Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 VN T SAV++ H+PTG+VV+ Q RS+ +N+ A +L KL +E + + E Sbjct: 91 VNKTSSAVQLKHLPTGIVVKSQATRSRSQNRKIARKILAEKLEFMERGTESRVGALAE 148 >gi|325185474|emb|CCA19957.1| unnamed protein product putative [Albugo laibachii Nc14] Length = 152 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 31/54 (57%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 + SG GGQ +N + V + H PTG+ V+CQ+ R N+ A +L KL +L Sbjct: 47 KGSGKGGQKINKVRNCVLLKHSPTGIQVRCQKTRCLDDNRRIARKLLTEKLDDL 100 >gi|237837039|ref|XP_002367817.1| peptidyl-tRNA hydrolase domain-containing protein [Toxoplasma gondii ME49] gi|211965481|gb|EEB00677.1| peptidyl-tRNA hydrolase domain-containing protein [Toxoplasma gondii ME49] Length = 330 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 29/46 (63%) Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 Q VN T+S V I H+ G+V++CQ RSQ KN+ A +L KL E Sbjct: 217 QKVNKTNSCVVIVHLTRGLVIRCQHSRSQRKNRIMARELLLKKLQE 262 >gi|170575451|ref|XP_001893249.1| hypothetical protein Bm1_08890 [Brugia malayi] gi|158600871|gb|EDP37928.1| hypothetical protein Bm1_08890 [Brugia malayi] Length = 116 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 22/31 (70%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 G GGQ VN T +AV I H+PTGVVV+ Q R Sbjct: 13 GPGGQKVNMTKNAVTIKHVPTGVVVRVHQSR 43 >gi|33322102|gb|AAQ06771.1|AF496112_1 peptide chain release factor 1 [Lactobacillus delbrueckii subsp. lactis] Length = 64 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY ++AE + +K ++ E G K ++I G Y LK E G HR+ R Sbjct: 4 FAGDLLRMYEKYAENQGWKVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAHRVQR 63 Query: 193 I 193 I Sbjct: 64 I 64 >gi|254498257|ref|ZP_05110999.1| peptide chain release factor [Legionella drancourtii LLAP12] gi|254352506|gb|EET11299.1| peptide chain release factor [Legionella drancourtii LLAP12] Length = 135 Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 27/39 (69%) Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 SG GGQ ++ T S V + H+P+G+ ++CQ+ RS+ N+ Sbjct: 31 GSGKGGQKLHKTASTVYLKHVPSGIEIKCQESRSREGNR 69 >gi|254568480|ref|XP_002491350.1| hypothetical protein [Pichia pastoris GS115] gi|238031147|emb|CAY69070.1| Hypothetical protein PAS_chr2-1_0443 [Pichia pastoris GS115] Length = 168 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 31/46 (67%) Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 +N T+S V++THI TG+VV Q RS+ +N+ A +L KL +LE Sbjct: 49 INKTNSKVQLTHIATGIVVTSQATRSREQNRKIAREILALKLQDLE 94 >gi|328352136|emb|CCA38535.1| Peptide chain release factor 1 [Pichia pastoris CBS 7435] Length = 147 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 31/46 (67%) Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 +N T+S V++THI TG+VV Q RS+ +N+ A +L KL +LE Sbjct: 28 INKTNSKVQLTHIATGIVVTSQATRSREQNRKIAREILALKLQDLE 73 >gi|312084786|ref|XP_003144416.1| hypothetical protein LOAG_08838 [Loa loa] gi|307760418|gb|EFO19652.1| hypothetical protein LOAG_08838 [Loa loa] Length = 140 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 24/36 (66%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 G GGQ VN T +AV I H+PTG+VV+ Q R +N Sbjct: 36 GPGGQKVNMTRNAVTIKHVPTGIVVRVHQSRLLQEN 71 >gi|156343066|ref|XP_001621028.1| hypothetical protein NEMVEDRAFT_v1g7994 [Nematostella vectensis] gi|156206594|gb|EDO28928.1| predicted protein [Nematostella vectensis] Length = 87 Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +++ E D + G GGQ VN T++ V + H+PTG+ C Q RS +N++ A +L Sbjct: 5 VKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPTGI---CHQTRSLTRNRSIARELL 61 Query: 281 RAKLYEL 287 +L +L Sbjct: 62 LNQLDQL 68 >gi|149198864|ref|ZP_01875906.1| peptidyl-tRNA hydrolase domain protein [Lentisphaera araneosa HTCC2155] gi|149138062|gb|EDM26473.1| peptidyl-tRNA hydrolase domain protein [Lentisphaera araneosa HTCC2155] Length = 157 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 26/46 (56%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 C D ++ASG GGQ N T SAVR+ H T + ++R Q NK Sbjct: 18 CTQDFFKASGPGGQKKNKTSSAVRLIHKETDIQASASEDRQQSVNK 63 >gi|297183730|gb|ADI19854.1| protein chain release factor a [uncultured alpha proteobacterium EB000_46D07] Length = 90 Score = 43.5 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 3/53 (5%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 DS +A LEV AG GG E+ +A+ L MY R+A K +K E +E+ E GI Sbjct: 38 DSRNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHGWKFEVMEV---SETGI 87 >gi|308185762|ref|YP_003929893.1| hypothetical protein Pvag_0224 [Pantoea vagans C9-1] gi|308056272|gb|ADO08444.1| Uncharacterized protein yaeJ [Pantoea vagans C9-1] Length = 136 Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 24/84 (28%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258 +EI ES+ + RA GAGGQHVN +A+ + H+ TG Sbjct: 8 VEIPESEIELTAIRAQGAGGQHVNKASTAIHLRFDIAASSLPAFYKERLLTASHHLITGE 67 Query: 259 --VVVQCQQERSQHKNKAQAWNML 280 VV++ Q+ RSQ N+ A L Sbjct: 68 GVVVIKAQEYRSQEMNREAALQRL 91 >gi|270159507|ref|ZP_06188163.1| putative peptide chain release factor [Legionella longbeachae D-4968] gi|289165692|ref|YP_003455830.1| unknown proteins [Legionella longbeachae NSW150] gi|269987846|gb|EEZ94101.1| putative peptide chain release factor [Legionella longbeachae D-4968] gi|288858865|emb|CBJ12787.1| putative unknown proteins [Legionella longbeachae NSW150] Length = 134 Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 38/66 (57%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 +++ I+E+D SG GGQ ++ T S V + H P+G+ ++CQ+ RS+ N+ A Sbjct: 15 MKLSINEADLIEKFILGSGKGGQKLHKTASTVYLKHEPSGLEIKCQESRSREDNRYFARV 74 Query: 279 MLRAKL 284 L KL Sbjct: 75 RLCEKL 80 >gi|156374287|ref|XP_001629739.1| predicted protein [Nematostella vectensis] gi|156216746|gb|EDO37676.1| predicted protein [Nematostella vectensis] Length = 95 Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +++ E D + G GGQ VN T++ V + H+PTG+ C Q RS +N++ A +L Sbjct: 5 VKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPTGI---CHQTRSLTRNRSIARELL 61 Query: 281 RAKLYEL 287 +L +L Sbjct: 62 LNQLDQL 68 >gi|304396667|ref|ZP_07378548.1| Class I peptide chain release factor [Pantoea sp. aB] gi|304356176|gb|EFM20542.1| Class I peptide chain release factor [Pantoea sp. aB] Length = 136 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 24/84 (28%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258 +EI ES+ + RA GAGGQHVN +A+ + H+ TG Sbjct: 8 VEIPESEIELTAIRAQGAGGQHVNKASTAIHLRFDIAASSLPAFYKERLLTASHHLITGD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNML 280 VV++ Q+ RSQ N+ A L Sbjct: 68 GVVVIKAQEYRSQEMNREAALQRL 91 >gi|221505032|gb|EEE30686.1| peptidyl-tRNA hydrolase domain-containing protein, putative [Toxoplasma gondii VEG] Length = 330 Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 29/46 (63%) Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 Q VN T++ V I H+ G+V++CQ RSQ KN+ A +L KL E Sbjct: 217 QKVNKTNNCVVIVHLTRGLVIRCQHSRSQRKNRIMARELLLKKLQE 262 >gi|213026528|ref|ZP_03340975.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 54 Score = 43.1 bits (100), Expect = 0.065, Method: Composition-based stats. Identities = 19/39 (48%), Positives = 28/39 (71%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ Sbjct: 15 DERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWR 53 >gi|255024491|ref|ZP_05296477.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208] Length = 165 Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 12/160 (7%) Query: 13 LFDWDNAVQ-RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 ++D AV+ R LN DP + + + L +E+ + + +E + +++ + Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND---AYLEVHAGA 125 LL L+++ + +E LQ+ K ++E + LL D ND LE+ A Sbjct: 61 TKELLGEKLDDEMREMAKEELAELQKEKADLEERL--KLLLVPKDPNDDKNVILEIRGAA 118 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 GG E+ +A L RMY+++AE R +K +EI D GI Sbjct: 119 GGDEAALFAGDLFRMYSKYAESRGWK---VEIMDANPTGI 155 >gi|328852030|gb|EGG01179.1| hypothetical protein MELLADRAFT_92698 [Melampsora larici-populina 98AG31] Length = 177 Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 18/81 (22%) Query: 222 EISESDCRIDTYRASGAGGQHVNTT---------DS---------AVRITHIPTGVVVQC 263 +++ESD + R SG GGQ +N+ DS +V + H PTG+ VQC Sbjct: 37 KLNESDLIEEFVRGSGPGGQCINSLSFSQNMLMDDSCILKKTNFISVSLIHKPTGIRVQC 96 Query: 264 QQERSQHKNKAQAWNMLRAKL 284 +RS+ N+ +A +L K+ Sbjct: 97 HAQRSRESNRKEARKILSEKV 117 >gi|70934187|ref|XP_738357.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56514509|emb|CAH83815.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 194 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 + +G GGQ VN T++ V I + T +V++C + R +N+ A +L K+ + + Sbjct: 84 KGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYARELLYEKITSINNK 143 Query: 291 KREEIANIGESSKTEI 306 +E+I N E K +I Sbjct: 144 AKEDIINQIEKEKRQI 159 >gi|88607060|ref|YP_505064.1| peptide chain release factor 2, truncation [Anaplasma phagocytophilum HZ] gi|88598123|gb|ABD43593.1| peptide chain release factor 2, truncated [Anaplasma phagocytophilum HZ] Length = 72 Score = 42.7 bits (99), Expect = 0.084, Method: Composition-based stats. Identities = 19/37 (51%), Positives = 25/37 (67%) Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y + PY+MVKDLRT E + V++GDLD F+ A L Sbjct: 23 YKMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAAL 59 >gi|68171148|ref|ZP_00544556.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str. Sapulpa] gi|67999418|gb|EAM86059.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str. Sapulpa] Length = 39 Score = 42.7 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 19/38 (50%), Positives = 26/38 (68%) Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + PYQMVKD+RT E + + VLDG+LD F+ + L K Sbjct: 1 MHPYQMVKDIRTGHEVGNINSVLDGNLDSFIISALTTK 38 >gi|154290812|ref|XP_001545996.1| hypothetical protein BC1G_15445 [Botryotinia fuckeliana B05.10] gi|150847396|gb|EDN22589.1| hypothetical protein BC1G_15445 [Botryotinia fuckeliana B05.10] Length = 168 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 34/54 (62%) Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 +++ HIPTG+V++ Q RS+ +N+ A ML +L LE K +A +GE+ K Sbjct: 44 IQLKHIPTGMVLKVQATRSRTQNRKIARQMLAERLELLEKGKESRVAIVGETKK 97 >gi|223936544|ref|ZP_03628455.1| Class I peptide chain release factor [bacterium Ellin514] gi|223894708|gb|EEF61158.1| Class I peptide chain release factor [bacterium Ellin514] Length = 120 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 25/40 (62%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 R+SG GGQ+VN + V + H+PT V V Q RSQ N+ Sbjct: 18 RSSGPGGQNVNKVATRVTLRHLPTNVTVSVQDSRSQFMNR 57 >gi|194697006|gb|ACF82587.1| unknown [Zea mays] Length = 95 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 7/84 (8%) Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328 NKA+A +LRA+LYELE +R + + +IG G +IR+Y P V D R Sbjct: 2 NKAKALKVLRARLYELE--RRRLHMDRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRV 58 Query: 329 NIEKTSPSDVLDGD-LDDFMKATL 351 + S +DV++G+ LD F+ A L Sbjct: 59 GVTHHSIADVMEGESLDMFVDALL 82 >gi|169837782|ref|ZP_02870970.1| peptide chain release factor 1 [candidate division TM7 single-cell isolate TM7a] Length = 62 Score = 42.4 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 22/48 (45%), Positives = 28/48 (58%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 +E+ AGAGG E+ +A+ L RMY R+ E FKTE L H IK Sbjct: 1 MEIRAGAGGDEASLFASELYRMYLRYCEIHNFKTELLVNHQMMLVAIK 48 >gi|289678407|ref|ZP_06499297.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae FF5] Length = 145 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 10/76 (13%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA-DSNDAYLEVHAGAGGTESQD 132 E+A+EE ++ET L ++LE + ++ LL + D + +LE+ AG GG E+ Sbjct: 78 EMAVEE-----VRETRQQL--VELEAQLQRM--LLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKR 148 ++ L RMY+R+AE+R Sbjct: 129 FSGDLFRMYSRYAERR 144 >gi|302654387|ref|XP_003019001.1| peptidyl-tRNA hydrolase domain protein [Trichophyton verrucosum HKI 0517] gi|291182691|gb|EFE38356.1| peptidyl-tRNA hydrolase domain protein [Trichophyton verrucosum HKI 0517] Length = 212 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL--QKREEIAN 297 + SAV++ HIPT VV+CQ RSQ +N+ A +L K+ LE Q R I N Sbjct: 90 IGMISSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRILAEKIELLEKGEQSRAAIVN 146 >gi|225560984|gb|EEH09265.1| hypothetical protein HCBG_02802 [Ajellomyces capsulatus G186AR] Length = 385 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 1/54 (1%) Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 G Q +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L K+ EL+L+ Sbjct: 64 GKSRQSINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKV-ELQLK 116 >gi|68067771|ref|XP_675820.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|68077037|ref|XP_680438.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56495222|emb|CAI02598.1| conserved hypothetical protein [Plasmodium berghei] gi|56501376|emb|CAI04754.1| hypothetical protein PB001267.02.0 [Plasmodium berghei] Length = 147 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 + +G GGQ VN T++ V I + T +V++C + R +N+ A +L K+ + + Sbjct: 36 KGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYARELLYDKITSINNK 95 Query: 291 KREEIANIGESSKTEI 306 +E+I N E K +I Sbjct: 96 AKEDIINQIEKEKRQI 111 >gi|293605771|ref|ZP_06688145.1| peptidyl-tRNA hydrolase domain protein [Achromobacter piechaudii ATCC 43553] gi|292815820|gb|EFF74927.1| peptidyl-tRNA hydrolase domain protein [Achromobacter piechaudii ATCC 43553] Length = 138 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 26/92 (28%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTGV--------- 259 V DS+ I+ E D RA GAGGQ+VN SA VR +H+P V Sbjct: 4 VQDSLYID--ERDLTFSMIRAQGAGGQNVNKVSSAVHLRFDVRASHLPLEVQDALCAVSD 61 Query: 260 ---------VVQCQQERSQHKNKAQAWNMLRA 282 V++ Q RSQ KN+A+A L A Sbjct: 62 HRISKEGVIVIKSQSFRSQEKNRAEAIERLVA 93 >gi|241764161|ref|ZP_04762196.1| Class I peptide chain release factor [Acidovorax delafieldii 2AN] gi|241366498|gb|EER60998.1| Class I peptide chain release factor [Acidovorax delafieldii 2AN] Length = 135 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTG---------------- 258 +E++E++ RA GAGGQ+VN SAV + + +P Sbjct: 6 LEVAEAEVEFTAMRAQGAGGQNVNKVSSAVHLRFDVGASSLPADVKERLLALRDTRITQD 65 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282 VV++ QQ RSQ +N+A A L A Sbjct: 66 GVVVIKAQQYRSQEQNRADALARLNA 91 >gi|323700419|ref|ZP_08112331.1| Class I peptide chain release factor [Desulfovibrio sp. ND132] gi|323460351|gb|EGB16216.1| Class I peptide chain release factor [Desulfovibrio desulfuricans ND132] Length = 141 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 17/30 (56%), Positives = 21/30 (70%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV 250 + I ES+ R R+SG GGQHVNTTD+ V Sbjct: 8 VSIPESELRFTACRSSGPGGQHVNTTDTRV 37 >gi|82539988|ref|XP_724342.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23478956|gb|EAA15907.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 172 Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 + +G GGQ VN T++ V I + T +V++C + R +N+ A +L K+ + + Sbjct: 83 KGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYARELLYDKITSINNK 142 Query: 291 KREEIAN 297 +E+I N Sbjct: 143 VKEDIIN 149 >gi|84999574|ref|XP_954508.1| Dead/deah box RNA helicase [Theileria annulata] gi|65305506|emb|CAI73831.1| Dead/deah box RNA helicase, putative [Theileria annulata] Length = 988 Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 9/98 (9%) Query: 221 IEISESDCRID--TYRASGAGGQHVNTTDSAVRITHI-PTGVV---VQCQQERSQHKNKA 274 EISE + +++ +ASG GGQ +N + V++ + P+G + ++C++ R+ N+ Sbjct: 82 FEISEPNSKLEEKYIKASGPGGQKINKSAICVQLNYSNPSGSIKINIKCKKHRTLILNRI 141 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 +A +L AK+ E+ K +EI I + E R++ Sbjct: 142 EATEILIAKINEI---KEKEIMEIKRENFKEAMRNRKL 176 >gi|325273397|ref|ZP_08139654.1| hypothetical protein G1E_10188 [Pseudomonas sp. TJI-51] gi|324101470|gb|EGB99059.1| hypothetical protein G1E_10188 [Pseudomonas sp. TJI-51] Length = 137 Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 37/127 (29%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV------RITHIP---------------TG- 258 +++ ++D + RA GAGGQ+VN SAV R + +P TG Sbjct: 8 VQLPDTDIELSYIRAQGAGGQNVNKVSSAVHLRFDIRASSLPAFYKERLLALRDSRITGD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL-------ELQKREEIANIGESSKTEIGWG 309 ++++ QQ R+Q +N+A A A+L EL E ++R +G SKT G Sbjct: 68 GVLIIKAQQFRTQEQNRADAL----ARLAELIIAAGKTEKKRRPTKPTLG--SKTRRLEG 121 Query: 310 RQIRSYV 316 + RS V Sbjct: 122 KARRSTV 128 >gi|320102860|ref|YP_004178451.1| Class I peptide chain release factor [Isosphaera pallida ATCC 43644] gi|319750142|gb|ADV61902.1| Class I peptide chain release factor [Isosphaera pallida ATCC 43644] Length = 209 Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%) Query: 203 HTSFS-SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 H + S S ++P D+ ++ C R SG GGQ+ N ++A+ + H PTG+ V Sbjct: 20 HLAMSDSSTIHPAQWDAASLQ---RQCDTTRTRRSGPGGQNRNKVETAIVLVHRPTGIKV 76 Query: 262 QCQQERSQHKNKAQAWNMLRAKL 284 + + R Q +N A LR L Sbjct: 77 EANERRRQGENLQVALFRLRIAL 99 >gi|291616369|ref|YP_003519111.1| YaeJ [Pantoea ananatis LMG 20103] gi|291151399|gb|ADD75983.1| YaeJ [Pantoea ananatis LMG 20103] gi|327392820|dbj|BAK10242.1| class I peptide chain release factor YaeJ [Pantoea ananatis AJ13355] Length = 136 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 24/91 (26%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258 +E+ +S+ + RA G+GGQHVN T +A+ + H+ TG Sbjct: 8 VELPDSEIELTAIRAQGSGGQHVNKTSTAIHLRFDIAASSLPPFYKERLLNASHHLITGD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 V+++ Q+ RSQ N+ A L + EL Sbjct: 68 GTVIIKAQEYRSQEMNREAALQRLVNLIREL 98 >gi|16128184|ref|NP_414733.1| conserved protein [Escherichia coli str. K-12 substr. MG1655] gi|89107072|ref|AP_000852.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110] gi|170079828|ref|YP_001729148.1| hypothetical protein ECDH10B_0172 [Escherichia coli str. K-12 substr. DH10B] gi|238899590|ref|YP_002925386.1| hypothetical protein BWG_0184 [Escherichia coli BW2952] gi|256025504|ref|ZP_05439369.1| peptidyl-tRNA hydrolase domain protein [Escherichia sp. 4_1_40B] gi|300949774|ref|ZP_07163749.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 116-1] gi|300956077|ref|ZP_07168401.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 175-1] gi|301028687|ref|ZP_07191907.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 196-1] gi|301646517|ref|ZP_07246391.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 146-1] gi|307136792|ref|ZP_07496148.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli H736] gi|331640646|ref|ZP_08341794.1| aminoacyl-tRNA hydrolase [Escherichia coli H736] gi|1175507|sp|P40711|YAEJ_ECOLI RecName: Full=Uncharacterized protein yaeJ gi|845336|gb|AAA82971.1| orf 140; significant similarity to ORF next to beta-keto adipate succinyl CoA transferase from P. putida [Escherichia coli] gi|1552767|gb|AAB08619.1| hypothetical [Escherichia coli] gi|1785845|dbj|BAA08432.1| YaeJ [Escherichia coli W3110] gi|1786389|gb|AAC73302.1| conserved protein [Escherichia coli str. K-12 substr. MG1655] gi|85674377|dbj|BAA77867.2| conserved hypothetical protein [Escherichia coli str. K12 substr. W3110] gi|169887663|gb|ACB01370.1| conserved protein [Escherichia coli str. K-12 substr. DH10B] gi|238860430|gb|ACR62428.1| conserved protein [Escherichia coli BW2952] gi|260450605|gb|ACX41027.1| Class I peptide chain release factor [Escherichia coli DH1] gi|299878286|gb|EFI86497.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 196-1] gi|300317071|gb|EFJ66855.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 175-1] gi|300450839|gb|EFK14459.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 116-1] gi|301075270|gb|EFK90076.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 146-1] gi|315134882|dbj|BAJ42041.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli DH1] gi|315616323|gb|EFU96941.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3431] gi|323939932|gb|EGB36130.1| RF-1 domain-containing protein [Escherichia coli E482] gi|331040392|gb|EGI12599.1| aminoacyl-tRNA hydrolase [Escherichia coli H736] gi|332341525|gb|AEE54859.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 140 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + EL +K+ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAMIKELTTEKK 103 >gi|328768224|gb|EGF78271.1| hypothetical protein BATDEDRAFT_90766 [Batrachochytrium dendrobatidis JAM81] Length = 177 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%) Query: 203 HTSFSSIWVYPV-------VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 TS +++ + P V + +++ E+D + SG GGQ +N +V++ H Sbjct: 39 QTSAATLSIQPTQSQVPKEVKKRLPVQLVETDLVEKFTKGSGPGGQKINKCKHSVQLWHT 98 Query: 256 PTGVVVQCQQERSQHKNKAQA 276 PTG+ V+ Q+ R N+ +A Sbjct: 99 PTGLFVETQRFRELASNRREA 119 >gi|266622715|ref|ZP_06115650.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479] gi|288865552|gb|EFC97850.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479] Length = 51 Score = 40.4 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 20/35 (57%), Positives = 24/35 (68%) Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +QPY MVKD RTN E + + VLDG LD F+ A L Sbjct: 1 MQPYTMVKDHRTNAETGNVNSVLDGALDLFIYAYL 35 >gi|99034620|ref|ZP_01314576.1| hypothetical protein Wendoof_01000612 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 89 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 7/81 (8%) Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332 A +LRA+LYE+E QK+E K++IG G +IR+Y P + D R N+ Sbjct: 1 ALKVLRARLYEIERQKKE--MERSTMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTS 57 Query: 333 TSPSDVL-DGDLDDFMKATLA 352 ++ +G+LD+F++A ++ Sbjct: 58 HRLEQIIKEGELDEFIEALIS 78 >gi|332529476|ref|ZP_08405435.1| hypothetical protein HGR_06171 [Hylemonella gracilis ATCC 19624] gi|332041122|gb|EGI77489.1| hypothetical protein HGR_06171 [Hylemonella gracilis ATCC 19624] Length = 130 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 28/94 (29%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV------RITHIPTG---------------- 258 + I E + RA G GGQ+VN SAV R + +P Sbjct: 1 MPIPEHEVEFTAVRAQGPGGQNVNKVSSAVHLRFDIRASSLPEHVKDRLLAWPDQRVSKD 60 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 VV++ Q R+Q +NKA+AW A+L EL Q Sbjct: 61 GVVVIKAQTARTQEQNKAEAW----ARLAELVAQ 90 >gi|302877867|ref|YP_003846431.1| Class I peptide chain release factor [Gallionella capsiferriformans ES-2] gi|302580656|gb|ADL54667.1| Class I peptide chain release factor [Gallionella capsiferriformans ES-2] Length = 136 Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 24/89 (26%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTG------------- 258 S IEI +++ ++ RA GAGGQ+VN SA+ + + +P Sbjct: 4 SARIEIPDTEIELNAIRAQGAGGQNVNKVSSAIHLRFDINASSLPEEYKEKLRQLADRRI 63 Query: 259 -----VVVQCQQERSQHKNKAQAWNMLRA 282 ++++ Q+ RSQ KN+A A L+A Sbjct: 64 SNDDVIILKAQRFRSQDKNRADAMERLQA 92 >gi|298528758|ref|ZP_07016162.1| Class I peptide chain release factor [Desulfonatronospira thiodismutans ASO3-1] gi|298512410|gb|EFI36312.1| Class I peptide chain release factor [Desulfonatronospira thiodismutans ASO3-1] Length = 137 Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 24/84 (28%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT----------------- 257 + I ES+ + RASG GGQ VN T SAV++ + +P Sbjct: 7 LSIKESEIDLQAVRASGPGGQKVNKTASAVQLFFDIKASSLPQIYKERLLNLNDQRITRD 66 Query: 258 GV-VVQCQQERSQHKNKAQAWNML 280 GV V++ ++ RSQ KNK +A L Sbjct: 67 GVIVIRAERSRSQAKNKKEALKKL 90 >gi|237729498|ref|ZP_04559979.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226909227|gb|EEH95145.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 140 Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 25/108 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258 + I +++ I RA GAGGQHVN T +A+ + H+ +G Sbjct: 8 VSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISGD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSK 303 ++++ Q+ RSQ N+ A + L A + EL +QK + +SK Sbjct: 68 GIIIIKAQEYRSQELNREAAISRLVAVIKELTAVQKSRQATRPTRASK 115 >gi|283835254|ref|ZP_06354995.1| peptidyl-tRNA hydrolase domain protein [Citrobacter youngae ATCC 29220] gi|291068965|gb|EFE07074.1| peptidyl-tRNA hydrolase domain protein [Citrobacter youngae ATCC 29220] Length = 140 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 25/108 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258 + I +++ I RA GAGGQHVN T +A+ + H+ +G Sbjct: 8 VSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASGLPEYYKERLLAARHHLISGD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSK 303 ++++ Q+ RSQ N+ A + L A + EL +QK + +SK Sbjct: 68 GVIIIKAQEYRSQELNREAAISRLVAVIKELTAVQKSRQATRPTRASK 115 >gi|254785908|ref|YP_003073337.1| peptidyl-tRNA hydrolase domain-containing protein [Teredinibacter turnerae T7901] gi|237686949|gb|ACR14213.1| peptidyl-tRNA hydrolase domain protein [Teredinibacter turnerae T7901] Length = 135 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 24/84 (28%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTGV--------------- 259 E+++ D R RA GAGGQ+VN SAV + + +P V Sbjct: 6 FELNDGDIRFSAMRAQGAGGQNVNKVSSAVLLRFDVHASVLPPAVKQRLFQKESGRINSE 65 Query: 260 ---VVQCQQERSQHKNKAQAWNML 280 +++ QQ R+Q +NKA A L Sbjct: 66 GVLLIKAQQYRTQERNKADALERL 89 >gi|146310394|ref|YP_001175468.1| peptidyl-tRNA hydrolase domain protein [Enterobacter sp. 638] gi|145317270|gb|ABP59417.1| Class I peptide chain release factor [Enterobacter sp. 638] Length = 140 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 30/145 (20%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTG--------- 258 +++ S + I +S+ I RA GAGGQHVN +A +R + +P Sbjct: 1 MIELSRTVSIPDSEFEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPESYKDALLAAS 60 Query: 259 ---------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 ++++ Q+ RSQ N+ A L A + EL + ++ A + T Sbjct: 61 HHLITSDGVIIIKAQEYRSQELNREAALARLVALIKELTVVQKSRRA----TRPTRASKE 116 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTS 334 R++ S + VK LR I ++S Sbjct: 117 RRLSSKAQK--STVKSLRGKIRRSS 139 >gi|188533060|ref|YP_001906857.1| peptidyl-tRNA hydrolase domain protein [Erwinia tasmaniensis Et1/99] gi|188028102|emb|CAO95959.1| Conserved hypothetical protein YaeJ [Erwinia tasmaniensis Et1/99] Length = 138 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 24/91 (26%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVR--------------------ITH---IPT 257 I I ++D + RA GAGGQHVN + +A+ ++H P Sbjct: 8 IVIPDADIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASSLPEFYQQRMLAVSHHLITPE 67 Query: 258 G-VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 G V+++ Q+ RSQ N+ A L + EL Sbjct: 68 GMVIIKAQEYRSQEMNREAALKRLENLILEL 98 >gi|254966718|gb|ACT97351.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture bacterium AM_gF3SD01_01] gi|254966740|gb|ACT97367.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture bacterium AM_gF3SD01_07] Length = 140 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 25/108 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258 + I +++ I RA GAGGQHVN T +A+ + H+ +G Sbjct: 8 VSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASGLPEYYKERLLAASHHLISGD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGESSK 303 ++++ Q+ RSQ N+ A + L A + EL +QK + +SK Sbjct: 68 GVIIIKAQEYRSQELNREAAISRLVAVIKELTAVQKSRQATRPTRASK 115 >gi|154244289|ref|YP_001415247.1| class I peptide chain release factor [Xanthobacter autotrophicus Py2] gi|154158374|gb|ABS65590.1| Class I peptide chain release factor [Xanthobacter autotrophicus Py2] Length = 140 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 30/119 (25%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI-------THIPTGV------- 259 +++ + I ISE + + RASG GGQ+VN SAV++ ++P GV Sbjct: 1 MIEITPRIAISEDEIELAFVRASGPGGQNVNKVSSAVQLRFDAAHSPNLPEGVKHRLVRL 60 Query: 260 -----------VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 ++Q Q+ R+Q +N+ A A+L EL ++ +A I ++ +G Sbjct: 61 AGKRMTQGGVIIIQAQRFRTQERNREDAV----ARLVEL-IRSATIVAPIRRPTRPTLG 114 >gi|261338810|ref|ZP_05966668.1| hypothetical protein ENTCAN_05005 [Enterobacter cancerogenus ATCC 35316] gi|288318633|gb|EFC57571.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cancerogenus ATCC 35316] Length = 140 Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 24/103 (23%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT-------------------- 253 ++D S + I +++ I RA GAGGQHVN +A+ + Sbjct: 1 MIDLSRNVSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPEYYKERLLAAS 60 Query: 254 -HIPTG---VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 H+ T ++++ Q+ RSQ N+ A + L A + EL +++ Sbjct: 61 HHLITSDGVIIIKAQEYRSQELNREAALSRLVAVIKELTAEQK 103 >gi|51038077|gb|AAT93880.1| hypothetical protein [Oryza sativa Japonica Group] Length = 481 Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 3/99 (3%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D + + + E+D I + H N SA+R+ HI TGV + ERS NK + Sbjct: 189 DRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMK 245 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 A + L+AKL + + R + E + R+ RS Sbjct: 246 AISRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRS 284 >gi|161504640|ref|YP_001571752.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865987|gb|ABX22610.1| hypothetical protein SARI_02761 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 140 Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 24/101 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV--RITHIPTG-------------------- 258 I I++++ I RA GAGGQHVN T SA+ R + +G Sbjct: 8 ISIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDILASGLPEYYKQRLLTASHHLISHD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 ++++ Q+ RSQ N+ A L A + EL +++ A Sbjct: 68 GVIIIKAQEYRSQELNREAAIARLVAVIKELTAEQKSRRAT 108 >gi|209526204|ref|ZP_03274734.1| peptide chain release factor 1 [Arthrospira maxima CS-328] gi|209493301|gb|EDZ93626.1| peptide chain release factor 1 [Arthrospira maxima CS-328] Length = 98 Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 51/81 (62%), Gaps = 7/81 (8%) Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 +A +LRAKLY+++LQ+R+E + ++++G G +IR+Y + + + D R + Sbjct: 7 RAIQILRAKLYDIKLQERQE--KVTSLRRSQVGTGARSEKIRTYNYKDNR-ITDHRLG-Q 62 Query: 332 KTSPSDVLDGDLDDFMKATLA 352 + +++LDGD+D M+A ++ Sbjct: 63 NFTLANILDGDIDQVMEACIS 83 >gi|91203284|emb|CAJ72923.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 137 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 26/91 (28%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIP------------ 256 + + + I I E + RA GAGGQHVN +AV++ + +P Sbjct: 4 ISNKVTIPIDE--ISMHPIRAQGAGGQHVNKVATAVQLRFDINASSLPDFYKERLLSLSD 61 Query: 257 ---TG---VVVQCQQERSQHKNKAQAWNMLR 281 +G +V++ Q+ RSQ KNK A N LR Sbjct: 62 RRISGEGVIVIKAQKYRSQDKNKEDALNRLR 92 >gi|74317541|ref|YP_315281.1| hypothetical protein Tbd_1523 [Thiobacillus denitrificans ATCC 25259] gi|74057036|gb|AAZ97476.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 141 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 25/92 (27%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVR----ITHIPT------------------ 257 EIE+ E + + D RASG GGQ+VN SAV+ + H P+ Sbjct: 7 EIELDEREIQEDFVRASGPGGQNVNKVSSAVQLRFDVAHSPSLPQPVRDRLLVLAGRRVT 66 Query: 258 --GV-VVQCQQERSQHKNKAQAWNMLRAKLYE 286 GV +++ ++ RSQ +N+ A L A + E Sbjct: 67 QDGVLIIEAERYRSQRRNRDDALERLLALIRE 98 >gi|194336150|ref|YP_002017944.1| Class I peptide chain release factor [Pelodictyon phaeoclathratiforme BU-1] gi|194308627|gb|ACF43327.1| Class I peptide chain release factor [Pelodictyon phaeoclathratiforme BU-1] Length = 137 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 28/120 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTG---------------- 258 I I + + + T RA GAGGQ+VN ++AV + + +P Sbjct: 8 IAIPDEEIELQTMRAQGAGGQNVNKVETAVHLRFDVKASSLPEDFREKLLLLKDHRMTKD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 ++++ Q+ RSQ KN+ A L+A L + L + +S T+ R+I S V Sbjct: 68 GVIIIKAQRYRSQEKNRTDALMRLQALLQHVAL----PVKKRKPTSPTKSSKERRIESKV 123 >gi|326333804|ref|ZP_08200037.1| class I peptide chain release factor [Nocardioidaceae bacterium Broad-1] gi|325948386|gb|EGD40493.1| class I peptide chain release factor [Nocardioidaceae bacterium Broad-1] Length = 141 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 19/73 (26%) Query: 234 RASGAGGQHVNTTDSAVRIT-------------------HIPTGVVVQCQQERSQHKNKA 274 R+ G GGQ VNTTDS V ++ P + V ++RSQH+N+ Sbjct: 29 RSPGPGGQSVNTTDSRVELSWDPSASEALDESQRARILARSPGPITVVSHEQRSQHRNRV 88 Query: 275 QAWNMLRAKLYEL 287 A L ++ EL Sbjct: 89 AARERLALRIREL 101 >gi|164414764|pdb|2JY9|A Chain A, Nmr Structure Of Putative Trna Hydrolase Domain From Salmonella Typhimurium. Northeast Structural Genomics Consortium Target Str220 Length = 148 Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 24/101 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I++++ I RA GAGGQHVN T SA +R + +P Sbjct: 8 VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GV +++ Q+ RSQ N+ A L A + EL +++ A Sbjct: 68 GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRAT 108 >gi|283783979|ref|YP_003363844.1| peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168] gi|282947433|emb|CBG86979.1| putative peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168] Length = 139 Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 24/101 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HI--PT 257 + I+E + I RA GAGGQHVN +A+ + H+ P Sbjct: 8 VSIAEDELEITAIRAQGAGGQHVNKASTAIHLRFDIRASGLPEYYKERLLAASHHLISPD 67 Query: 258 G-VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 G ++++ Q+ RSQ N+ A L A + EL ++++ A Sbjct: 68 GIIIIKAQEYRSQTLNREAALARLVAVIKELTVEQKSRRAT 108 >gi|16759231|ref|NP_454848.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140780|ref|NP_804122.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213028871|ref|ZP_03343318.1| hypothetical protein Salmonelentericaenterica_44358 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213161619|ref|ZP_03347329.1| hypothetical protein Salmoneentericaenterica_17067 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213423698|ref|ZP_03356678.1| hypothetical protein Salmonentericaenterica_40183 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213428150|ref|ZP_03360900.1| hypothetical protein SentesTyphi_22790 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213584325|ref|ZP_03366151.1| hypothetical protein SentesTyph_25140 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213646231|ref|ZP_03376284.1| hypothetical protein SentesTy_02100 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213850219|ref|ZP_03381117.1| hypothetical protein SentesT_00953 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289830086|ref|ZP_06547526.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25369510|pir||AC0532 probable release factor STY0265 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501522|emb|CAD08699.1| putative release factor [Salmonella enterica subsp. enterica serovar Typhi] gi|29136404|gb|AAO67971.1| putative release factor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 140 Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 24/101 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I++++ I RA GAGGQHVN T SA +R + +P Sbjct: 8 VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GV +++ Q+ RSQ N+ A L A + EL +++ A Sbjct: 68 GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRAT 108 >gi|16763630|ref|NP_459245.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62178810|ref|YP_215227.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161612615|ref|YP_001586580.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553345|ref|ZP_02347094.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167990129|ref|ZP_02571229.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230551|ref|ZP_02655609.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168235022|ref|ZP_02660080.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168245010|ref|ZP_02669942.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264649|ref|ZP_02686622.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464194|ref|ZP_02698097.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194446732|ref|YP_002039480.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450266|ref|YP_002044230.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471764|ref|ZP_03077748.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736606|ref|YP_002113263.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251225|ref|YP_002145245.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263410|ref|ZP_03163484.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243513|ref|YP_002214201.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388576|ref|ZP_03215188.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207855758|ref|YP_002242409.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224582087|ref|YP_002635885.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911306|ref|ZP_04655143.1| hypothetical protein SentesTe_09240 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16418746|gb|AAL19204.1| putative-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62126443|gb|AAX64146.1| putative-tRNA hydrolase domain [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161361979|gb|ABX65747.1| hypothetical protein SPAB_00306 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405395|gb|ACF65617.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408570|gb|ACF68789.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458128|gb|EDX46967.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712108|gb|ACF91329.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632557|gb|EDX51011.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197214928|gb|ACH52325.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241665|gb|EDY24285.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197292024|gb|EDY31374.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938029|gb|ACH75362.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605674|gb|EDZ04219.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205322185|gb|EDZ10024.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205331555|gb|EDZ18319.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334913|gb|EDZ21677.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336203|gb|EDZ22967.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205346929|gb|EDZ33560.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707561|emb|CAR31835.1| putative release factor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224466614|gb|ACN44444.1| hypothetical protein SPC_0256 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245472|emb|CBG23262.1| putative release factor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267991931|gb|ACY86816.1| hypothetical protein STM14_0282 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156867|emb|CBW16343.1| putative release factor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911210|dbj|BAJ35184.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225173|gb|EFX50233.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322713264|gb|EFZ04835.1| Class I peptide chain release factor [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128560|gb|ADX15990.1| Uncharacterized protein yaeJ [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326621944|gb|EGE28289.1| Class I peptide chain release factor [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987192|gb|AEF06175.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 140 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 24/101 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I++++ I RA GAGGQHVN T SA +R + +P Sbjct: 8 VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GV +++ Q+ RSQ N+ A L A + EL +++ A Sbjct: 68 GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRAT 108 >gi|322616064|gb|EFY12981.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620847|gb|EFY17707.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623802|gb|EFY20639.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627250|gb|EFY24041.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630557|gb|EFY27321.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638225|gb|EFY34926.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640710|gb|EFY37361.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645506|gb|EFY42033.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648201|gb|EFY44668.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322657151|gb|EFY53434.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657521|gb|EFY53793.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663841|gb|EFY60041.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666674|gb|EFY62852.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672168|gb|EFY68280.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676521|gb|EFY72592.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679387|gb|EFY75432.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686286|gb|EFY82270.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193466|gb|EFZ78674.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197512|gb|EFZ82647.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201219|gb|EFZ86288.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209614|gb|EFZ94547.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212134|gb|EFZ96958.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216439|gb|EGA01165.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223371|gb|EGA07706.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225932|gb|EGA10152.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228527|gb|EGA12656.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236860|gb|EGA20936.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239640|gb|EGA23687.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242313|gb|EGA26342.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249975|gb|EGA33871.1| hypothetical protein SEEM9199_18642 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252405|gb|EGA36256.1| hypothetical protein SEEM8282_19849 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255688|gb|EGA39441.1| hypothetical protein SEEM8283_01112 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262875|gb|EGA46425.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265361|gb|EGA48857.1| hypothetical protein SEEM8285_04625 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271852|gb|EGA55270.1| hypothetical protein SEEM8287_04917 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 140 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 24/91 (26%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I++++ I RA GAGGQHVN T SA +R + +P Sbjct: 8 VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL 287 GV +++ Q+ RSQ N+ A L A + EL Sbjct: 68 GVIIIKAQEFRSQELNREAAIARLVAVIKEL 98 >gi|17232188|ref|NP_488736.1| peptidyl-tRNA hydrolase domain protein [Nostoc sp. PCC 7120] gi|17133833|dbj|BAB76395.1| alr4696 [Nostoc sp. PCC 7120] Length = 137 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 24/88 (27%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT-------------- 257 S +I I +S+ I R+ GAGGQ+VN +A+ + + +PT Sbjct: 5 SQKIIIPDSEIEISAIRSQGAGGQNVNKVSTAIHLRFNIEASSLPTFYKEQLLKLNDRRI 64 Query: 258 ---GVVV-QCQQERSQHKNKAQAWNMLR 281 GVVV + Q+ RSQ +NK +A L+ Sbjct: 65 NQEGVVVIKAQEHRSQEQNKEEALQRLK 92 >gi|316976972|gb|EFV60157.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis] Length = 544 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 34/65 (52%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + E D G GGQ+VN + V + H+PTG+ V+ ++R +N+ A L+ Sbjct: 414 LEEPDLEEKFVSGHGPGGQNVNKRQNCVFLRHVPTGLSVKVHEDRLLQRNRIIARVRLQE 473 Query: 283 KLYEL 287 KL +L Sbjct: 474 KLDQL 478 >gi|254448925|ref|ZP_05062380.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015] gi|198261462|gb|EDY85752.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015] Length = 140 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 26/91 (28%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT----------- 257 + +++ I ++E DC RA GAGGQ+VN SA+ + + +P Sbjct: 6 ISNNVSIALAEIDC--QAVRAQGAGGQNVNKVASAIHLRFDVARSSLPQFYRDRLLALND 63 Query: 258 ------GV-VVQCQQERSQHKNKAQAWNMLR 281 GV V++ Q+ R+Q KN+ A N L+ Sbjct: 64 QRLSKEGVIVIKAQRFRTQEKNREDALNRLK 94 >gi|289805029|ref|ZP_06535658.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 121 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 24/96 (25%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I++++ I RA GAGGQHVN T SA +R + +P Sbjct: 8 VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV +++ Q+ RSQ N+ A L A + EL +++ Sbjct: 68 GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQK 103 >gi|148271389|ref|YP_001220950.1| hypothetical protein CMM_0210 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829319|emb|CAN00232.1| conserved hypothetical protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 140 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 31/49 (63%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + I ++ R R+SG GGQHVNT+DS V++T P +V Q+R++ Sbjct: 9 LTIPAAELRWRFSRSSGPGGQHVNTSDSRVQLTWSPVESLVLNDQQRAR 57 >gi|33595815|ref|NP_883458.1| hypothetical protein BPP1141 [Bordetella parapertussis 12822] gi|81429531|sp|Q7WB66|MIAB_BORPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|33565894|emb|CAE36442.1| conserved hypothetical protein [Bordetella parapertussis] Length = 475 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIH 158 E ++F++L D A++ + G + + + YTR E R F LEI Sbjct: 156 EIEKFDALPPPRVDGATAFVSIMEGC-----SKYCSFCVVPYTRGEEVSRPFDDVLLEIA 210 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQG 186 D + G+K TLL + NAY G+ G Sbjct: 211 DLADQGVKEVTLLGQNVNAYRGAMGDSG 238 >gi|46575986|gb|AAT01347.1| unknown protein [Oryza sativa Japonica Group] Length = 499 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D + + + E+D I + H N SA+R+ HI TGV + ERS NK + Sbjct: 189 DRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMK 245 Query: 276 AWNMLRAKL 284 A + L+AKL Sbjct: 246 AISRLKAKL 254 >gi|332978825|gb|EGK15509.1| peptidyl-tRNA hydrolase domain protein [Psychrobacter sp. 1501(2011)] Length = 137 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 28/88 (31%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAV-------------------------RITH 254 +I ++ESD I RA GAGGQ+VN SA+ RIT Sbjct: 7 KISLNESDIEITAIRAQGAGGQNVNKVSSAIHLRFDINASSLSDEQKQQLLNSKDNRITK 66 Query: 255 IPTGV-VVQCQQERSQHKNKAQAWNMLR 281 GV +++ QQ R+Q +NK A L+ Sbjct: 67 --DGVLIIKAQQYRTQERNKIDAMERLK 92 >gi|168823089|ref|ZP_02835089.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205340613|gb|EDZ27377.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084494|emb|CBY94287.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 140 Score = 39.3 bits (90), Expect = 1.00, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 24/91 (26%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I++++ I RA GAGGQHVN T SA +R + +P Sbjct: 8 VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL 287 GV +++ Q+ RSQ N+ A L A + EL Sbjct: 68 GVIIIKAQEFRSQELNREAAIARLVAVIKEL 98 >gi|332286820|ref|YP_004418731.1| hypothetical protein PT7_3567 [Pusillimonas sp. T7-7] gi|330430773|gb|AEC22107.1| hypothetical protein PT7_3567 [Pusillimonas sp. T7-7] Length = 136 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 28/91 (30%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT-HIPTG--------------------- 258 I +SE + R+ GAGGQ+VN SA+ + IP Sbjct: 6 ISVSEEEIVFTAIRSQGAGGQNVNKVSSAIHLRFSIPDSSLPEPIKARLLALRDQRITAE 65 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 VV++ Q RSQ +NKA+A A+L EL Sbjct: 66 GVVVIKAQSSRSQEQNKAEAI----ARLQEL 92 >gi|33592184|ref|NP_879828.1| hypothetical protein BP1041 [Bordetella pertussis Tohama I] gi|81578782|sp|Q7VZ86|MIAB_BORPE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|33571829|emb|CAE41341.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|332381601|gb|AEE66448.1| hypothetical protein BPTD_1035 [Bordetella pertussis CS] Length = 447 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIH 158 E ++F++L D A++ + G + + + YTR E R F LE+ Sbjct: 128 EIEKFDALPPPRVDGATAFVSIMEGC-----SKYCSFCVVPYTRGEEVSRPFDDVLLEVA 182 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQG 186 D + G+K TLL + NAY G+ G Sbjct: 183 DLADQGVKEVTLLGQNVNAYRGAMGDSG 210 >gi|293394733|ref|ZP_06639025.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582] gi|291422859|gb|EFE96096.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582] Length = 137 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 24/93 (25%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT-------------------- 253 +++ S + I++ + + RA GAGGQHVN T +A+ + Sbjct: 1 MLELSRNVAIADHEIELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALN 60 Query: 254 -HIPTG---VVVQCQQERSQHKNKAQAWNMLRA 282 H+ TG V+++ Q+ RSQ N+ A L A Sbjct: 61 HHLITGDGVVIIKAQEYRSQELNREAALARLVA 93 >gi|317406423|gb|EFV86637.1| hypothetical protein HMPREF0005_05619 [Achromobacter xylosoxidans C54] Length = 138 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 30/96 (31%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTG---------- 258 V DS+ I+ E + RA GAGGQ+VN SA VR + +P Sbjct: 4 VQDSLYID--EREIEFSMIRAQGAGGQNVNKVSSAVHLRFDVRASSLPAEIQEALCAMND 61 Query: 259 --------VVVQCQQERSQHKNKAQA----WNMLRA 282 +V++ Q RSQ KN+A+A NM+RA Sbjct: 62 HRISKEGVIVIKSQSFRSQDKNRAEAIERLMNMVRA 97 >gi|114777943|ref|ZP_01452857.1| Protein chain release factor B [Mariprofundus ferrooxydans PV-1] gi|114551730|gb|EAU54282.1| Protein chain release factor B [Mariprofundus ferrooxydans PV-1] Length = 146 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 24/91 (26%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTG--------- 258 V++ S + I++ + I+ RA GAGGQ+VN SA+ + + +P Sbjct: 10 VLEISNTVSIADDEIEINAIRAQGAGGQNVNKVASAIHLRFDIHASSLPDAYKQRLLARQ 69 Query: 259 ---------VVVQCQQERSQHKNKAQAWNML 280 ++++ QQ RSQ +N+A A L Sbjct: 70 DQRISKEGIIIIKAQQFRSQEQNRADALTRL 100 >gi|323975640|gb|EGB70736.1| RF-1 domain-containing protein [Escherichia coli TW10509] Length = 140 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + EL +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103 >gi|33600343|ref|NP_887903.1| hypothetical protein BB1357 [Bordetella bronchiseptica RB50] gi|81431747|sp|Q7WMN3|MIAB_BORBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|33567942|emb|CAE31855.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 475 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIH 158 E ++F++L D A++ + G + + + YTR E R F LE+ Sbjct: 156 EIEKFDALPPPRVDGATAFVSIMEGC-----SKYCSFCVVPYTRGEEVSRPFDDVLLEVA 210 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQG 186 D + G+K TLL + NAY G+ G Sbjct: 211 DLADQGVKEVTLLGQNVNAYRGAMGDSG 238 >gi|319792789|ref|YP_004154429.1| class i peptide chain release factor [Variovorax paradoxus EPS] gi|315595252|gb|ADU36318.1| Class I peptide chain release factor [Variovorax paradoxus EPS] Length = 135 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 31/94 (32%) Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH------IPTGV------- 259 P++ D E+EIS RA GAGGQ+VN SAV + + +P V Sbjct: 5 PILIDPDEVEIS-------AIRAQGAGGQNVNKVSSAVHLRYDIHASSLPADVKERLLAL 57 Query: 260 -----------VVQCQQERSQHKNKAQAWNMLRA 282 V++ QQ R+Q N+A A L+A Sbjct: 58 RDSRITQEGVFVLKAQQHRTQEMNRADALARLQA 91 >gi|253995820|ref|YP_003047884.1| Class I peptide chain release factor [Methylotenera mobilis JLW8] gi|253982499|gb|ACT47357.1| Class I peptide chain release factor [Methylotenera mobilis JLW8] Length = 134 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 24/84 (28%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV-----------------RITHIPTG----- 258 I+I ESD + RA GAGGQ+VN SA+ R+ H+ Sbjct: 4 IQIPESDYELTAIRAQGAGGQNVNKVSSAIHLRFDIHASSLSDWLKERLLHLKDNRINDD 63 Query: 259 --VVVQCQQERSQHKNKAQAWNML 280 +V++ QQ R+Q NK A L Sbjct: 64 GVLVIKAQQYRTQEANKKDAVQRL 87 >gi|170780828|ref|YP_001709160.1| hypothetical protein CMS_0381 [Clavibacter michiganensis subsp. sepedonicus] gi|169155396|emb|CAQ00502.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 140 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 31/49 (63%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + I ++ R R+SG GGQHVNT+DS V++T G +V ++R++ Sbjct: 9 LTIPAAELRWRFSRSSGPGGQHVNTSDSRVQLTWYAAGSMVLSDEQRAR 57 >gi|332187078|ref|ZP_08388818.1| RF-1 domain protein [Sphingomonas sp. S17] gi|332012778|gb|EGI54843.1| RF-1 domain protein [Sphingomonas sp. S17] Length = 141 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/30 (63%), Positives = 20/30 (66%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV 250 I I E + RASG GGQHVNTTDSAV Sbjct: 10 IAIDEREIGESFTRASGPGGQHVNTTDSAV 39 >gi|170680631|ref|YP_001742320.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5] gi|293418077|ref|ZP_06660699.1| yaeJ protein [Escherichia coli B185] gi|331651097|ref|ZP_08352125.1| aminoacyl-tRNA hydrolase [Escherichia coli M718] gi|170518349|gb|ACB16527.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5] gi|291430795|gb|EFF03793.1| yaeJ protein [Escherichia coli B185] gi|309700400|emb|CBI99688.1| putative peptidyl-tRNA hydrolase [Escherichia coli ETEC H10407] gi|331051551|gb|EGI23600.1| aminoacyl-tRNA hydrolase [Escherichia coli M718] Length = 140 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 24/96 (25%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 8 VAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + EL +++ Sbjct: 68 GVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103 >gi|323935032|gb|EGB31405.1| RF-1 domain-containing protein [Escherichia coli E1520] Length = 140 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKEHLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + EL +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103 >gi|308048193|ref|YP_003911759.1| class I peptide chain release factor [Ferrimonas balearica DSM 9799] gi|307630383|gb|ADN74685.1| Class I peptide chain release factor [Ferrimonas balearica DSM 9799] Length = 141 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 25/105 (23%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR----ITH------------------- 254 S + I ++ RASG GGQHVN T +A+ + H Sbjct: 5 SSRVSIPANELEFQMIRASGPGGQHVNKTSTAIMLIFDVKHSTALPDHYKSRILARAHPN 64 Query: 255 -IPTG-VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 P G ++++ QQ RSQ N+ A L+A + + +++ IA Sbjct: 65 LTPGGKIIIKAQQYRSQEMNRQDALERLKAMIDAAMVVQKKRIAT 109 >gi|302421296|ref|XP_003008478.1| peptidyl-tRNA hydrolase domain-containing protein [Verticillium albo-atrum VaMs.102] gi|261351624|gb|EEY14052.1| peptidyl-tRNA hydrolase domain-containing protein [Verticillium albo-atrum VaMs.102] Length = 202 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 23/117 (19%) Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL--QKREEIA----- 296 N T+SAV++ HIPTG+V++ Q RS+ +N+ A +L +L +LE Q R I Sbjct: 77 NKTNSAVQLKHIPTGIVIKSQATRSRSQNRKIARQLLAERLDDLENGDQSRNAIVAEAKR 136 Query: 297 ---------------NIGESSKTEIGWGRQIRSYVLQPYQMVK-DLRTNIEKTSPSD 337 + ++ + + G I + V + + TN+EKT+P+D Sbjct: 137 KKAASAAKKSKRKYRKLEDAGRHDGQPGDDITATVAPETDTGRVQVPTNLEKTNPTD 193 >gi|218547647|ref|YP_002381438.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia fergusonii ATCC 35469] gi|218355188|emb|CAQ87795.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469] Length = 140 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + EL +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103 >gi|302036838|ref|YP_003797160.1| putative peptide chain release factor, class I [Candidatus Nitrospira defluvii] gi|190343252|gb|ACE75640.1| peptidyl-tRNA hydrolase domain protein [Candidatus Nitrospira defluvii] gi|300604902|emb|CBK41235.1| putative Peptide chain release factor, class I [Candidatus Nitrospira defluvii] Length = 138 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 24/87 (27%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT-------------- 257 S + I + + + RA GAGGQHVN SA+ + + +P Sbjct: 5 STHVSIPDEEIELTAVRAQGAGGQHVNKVSSAIHLRFNILGSSLPPFYKERLLALRDHRI 64 Query: 258 ----GVVVQCQQERSQHKNKAQAWNML 280 ++++ Q RSQ +N+A A L Sbjct: 65 SREGTIIIKAQDSRSQERNRALALERL 91 >gi|204926867|ref|ZP_03218069.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323532|gb|EDZ08727.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 140 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 24/101 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I++++ I RA GAGGQHVN T SA +R + +P Sbjct: 8 VSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GV +++ Q+ RSQ N+ A L A + E ++++ A Sbjct: 68 GVIIIKAQEFRSQELNREAAIARLVAVIKEFTAEQKKRRAT 108 >gi|146342892|ref|YP_001207940.1| peptidyl-tRNA hydrolase domain-containing protein [Bradyrhizobium sp. ORS278] gi|146195698|emb|CAL79725.1| putative Class I peptide chain release factor domain protein [Bradyrhizobium sp. ORS278] Length = 139 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 31/127 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAV-------RITHIP-------------- 256 S ++ I E+D I RASG GGQ+VN ++ RIT +P Sbjct: 5 SRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRIT-LPEDAAARLARLAGQR 63 Query: 257 ---TGV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQ---KREEIANIGESSKTEIGWG 309 TGV V+Q ++ R+Q +NKA A L L E ++ +R G SK G Sbjct: 64 MTKTGVIVIQAERFRTQERNKADAIERLVTLLREAMVRPKVRRPTKPTFG--SKQRRLEG 121 Query: 310 RQIRSYV 316 ++IRS V Sbjct: 122 KKIRSDV 128 >gi|213161326|ref|ZP_03347036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 42 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%) Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 1 RSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 38 >gi|261414426|ref|YP_003248109.1| hypothetical protein Fisuc_0012 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261370882|gb|ACX73627.1| hypothetical protein Fisuc_0012 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327448|gb|ADL26649.1| putative peptide chain release factor [Fibrobacter succinogenes subsp. succinogenes S85] Length = 163 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 C + Y+ SG GGQH N T++ V ++ + ++ + RS +NK A + ++ L Sbjct: 18 CTLKGYQGSGPGGQHRNKTNTGVHLSLQQYNLEIKSSESRSAKENKIHALHHMQ---MAL 74 Query: 288 ELQKREE 294 L REE Sbjct: 75 ALNVREE 81 >gi|307824425|ref|ZP_07654650.1| Class I peptide chain release factor [Methylobacter tundripaludum SV96] gi|307734409|gb|EFO05261.1| Class I peptide chain release factor [Methylobacter tundripaludum SV96] Length = 138 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 24/89 (26%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIP--------------- 256 S ++ I +++ + RA GAGGQ+VN SAV + + +P Sbjct: 5 SNQVSIPDNEIEVHAIRAQGAGGQNVNKVSSAVHLRFDINASSLPEFYKEKLLALNDQRI 64 Query: 257 --TGV-VVQCQQERSQHKNKAQAWNMLRA 282 GV +++ QQ R+Q KNK A + L+A Sbjct: 65 SKEGVIIIKAQQYRTQEKNKEDALSRLQA 93 >gi|93005695|ref|YP_580132.1| class I peptide chain release factor [Psychrobacter cryohalolentis K5] gi|92393373|gb|ABE74648.1| Class I peptide chain release factor [Psychrobacter cryohalolentis K5] Length = 137 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---THIPT-------------------- 257 I +++SD I RA GAGGQ+VN SA+ + H + Sbjct: 8 ISLNDSDVEISAIRAQGAGGQNVNKVSSAIHLRFDIHASSLSDVNKQRLLDSKDSRISKE 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRA 282 GV +++ QQ R+Q +NK A+ L++ Sbjct: 68 GVLIIKAQQFRTQERNKIDAFERLQS 93 >gi|323190408|gb|EFZ75683.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli RN587/1] gi|324112397|gb|EGC06374.1| RF-1 domain-containing protein [Escherichia fergusonii B253] Length = 140 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + EL +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103 >gi|126700551|ref|YP_001089448.1| hypothetical protein CD2933 [Clostridium difficile 630] gi|115251988|emb|CAJ69824.1| Hypothetical protein CD630_29330 [Clostridium difficile] Length = 108 Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 28/45 (62%) Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 V + D +V +THIPTG+ V+C+ S KNK + +L +L ++ Sbjct: 54 VKSKDYSVEVTHIPTGITVKCRSTNSILKNKNKCLEVLEEELIKI 98 >gi|325496123|gb|EGC93982.1| peptidyl-tRNA hydrolase domain protein [Escherichia fergusonii ECD227] Length = 140 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + EL +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103 >gi|238759925|ref|ZP_04621079.1| hypothetical protein yaldo0001_6820 [Yersinia aldovae ATCC 35236] gi|238701832|gb|EEP94395.1| hypothetical protein yaldo0001_6820 [Yersinia aldovae ATCC 35236] Length = 138 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258 + + +S+ + RA GAGGQHVN T +A+ + +H+ T Sbjct: 8 VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLVTAD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282 V+++ Q+ RSQ N+ A L A Sbjct: 68 GVVIIKAQEYRSQDMNREAALARLVA 93 >gi|291614774|ref|YP_003524931.1| class I peptide chain release factor [Sideroxydans lithotrophicus ES-1] gi|291584886|gb|ADE12544.1| Class I peptide chain release factor [Sideroxydans lithotrophicus ES-1] Length = 137 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 24/100 (24%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTG---------------- 258 + I E + + RA GAGGQ+VN SAV + + +P Sbjct: 8 VVIPEREIELTAVRAQGAGGQNVNKVSSAVHLRFDIAASSLPPEFKERLLQLSDQRITRD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 VV++ Q+ R+Q +N+ +A L++ L + ++ + +A Sbjct: 68 GVVVIKAQEFRNQEQNRNEALRRLKSLLMSIAVKPKPRVA 107 >gi|238784903|ref|ZP_04628903.1| hypothetical protein yberc0001_31620 [Yersinia bercovieri ATCC 43970] gi|238714220|gb|EEQ06232.1| hypothetical protein yberc0001_31620 [Yersinia bercovieri ATCC 43970] Length = 138 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258 + + +S+ + RA GAGGQHVN T +A+ + +H+ T Sbjct: 8 VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAE 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282 V+++ Q+ RSQ N+ A L A Sbjct: 68 GVVIIKAQEYRSQDMNREAALARLVA 93 >gi|82703524|ref|YP_413090.1| class I peptide chain release factor [Nitrosospira multiformis ATCC 25196] gi|82411589|gb|ABB75698.1| Class I peptide chain release factor [Nitrosospira multiformis ATCC 25196] Length = 140 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 28/87 (32%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAV-------------------------RITH 254 +I+I + + I RA GAGGQ+VN SAV RIT Sbjct: 6 KIDIPDHEVEIKAIRAQGAGGQNVNKVSSAVHLRFDINASSLSDIHKERLLKLHDQRITR 65 Query: 255 IPTGV-VVQCQQERSQHKNKAQAWNML 280 GV +++ QQ RSQ KN+ +A L Sbjct: 66 --EGVIIIKAQQYRSQEKNREEALRRL 90 >gi|619672|gb|AAA86092.1| ORF140 [Escherichia coli] Length = 124 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 24/87 (27%) Query: 230 IDTYRASGAGGQHVNTTDSA------VRITHIPT-----------------GV-VVQCQQ 265 I RA GAGGQHVN T +A +R + +P GV V++ Q+ Sbjct: 1 ITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQE 60 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKR 292 RSQ N+ A L A + EL +K+ Sbjct: 61 YRSQELNREAALARLVAMIKELTTEKK 87 >gi|238796634|ref|ZP_04640141.1| hypothetical protein ymoll0001_31010 [Yersinia mollaretii ATCC 43969] gi|238719612|gb|EEQ11421.1| hypothetical protein ymoll0001_31010 [Yersinia mollaretii ATCC 43969] Length = 138 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258 + + +S+ + RA GAGGQHVN T +A+ + +H+ T Sbjct: 8 VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAE 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282 V+++ Q+ RSQ N+ A L A Sbjct: 68 GVVIIKAQEYRSQDMNREAALARLVA 93 >gi|78355249|ref|YP_386698.1| hypothetical protein Dde_0202 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217654|gb|ABB37003.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 143 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 25/95 (26%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS--AVRITHIPTGVV------------ 260 +DD + I E + R SG GGQHVN T S VR + + V+ Sbjct: 6 LDDGTSLVIPEDEISFSASRGSGPGGQHVNVTASRVTVRFNVLHSAVLDRRQKERIASRL 65 Query: 261 -----------VQCQQERSQHKNKAQAWNMLRAKL 284 V C RSQH N+ A L A L Sbjct: 66 ASRISSAGELAVSCADGRSQHANRRTALQRLAALL 100 >gi|238792731|ref|ZP_04636362.1| hypothetical protein yinte0001_4840 [Yersinia intermedia ATCC 29909] gi|238727839|gb|EEQ19362.1| hypothetical protein yinte0001_4840 [Yersinia intermedia ATCC 29909] Length = 138 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258 + + +S+ + RA GAGGQHVN T +A+ + +H+ T Sbjct: 8 VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPDYYKERLLLLNSHLMTAE 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282 V+++ Q+ RSQ N+ A L A Sbjct: 68 GIVIIKAQEYRSQDMNREAALARLVA 93 >gi|307293298|ref|ZP_07573144.1| Class I peptide chain release factor [Sphingobium chlorophenolicum L-1] gi|306881364|gb|EFN12580.1| Class I peptide chain release factor [Sphingobium chlorophenolicum L-1] Length = 141 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 4/39 (10%) Query: 215 VDDSIEIEISESDCRIDTY-RASGAGGQHVNTTDSAVRI 252 V SI I+ E +T+ R++GAGGQHVNTTDSAV++ Sbjct: 6 VTRSIAIDTDELS---ETFVRSTGAGGQHVNTTDSAVQL 41 >gi|56412513|ref|YP_149588.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361448|ref|YP_002141084.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56126770|gb|AAV76276.1| putative release factor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197092924|emb|CAR58353.1| putative release factor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 140 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 24/101 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I++++ I RA GAGGQHVN T A +R + +P Sbjct: 8 VSIADNELEITAIRAQGAGGQHVNKTSGAIHLRFDIRASGLPEYYKQRLLTASHHLISDD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GV +++ Q+ RSQ N+ A L A + EL +++ A Sbjct: 68 GVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRAT 108 >gi|323964915|gb|EGB60381.1| RF-1 domain-containing protein [Escherichia coli M863] gi|327255171|gb|EGE66774.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_7v] Length = 140 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPNGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + EL +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103 >gi|294011513|ref|YP_003544973.1| protein chain release factor B [Sphingobium japonicum UT26S] gi|292674843|dbj|BAI96361.1| protein chain release factor B [Sphingobium japonicum UT26S] Length = 141 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/20 (75%), Positives = 19/20 (95%) Query: 233 YRASGAGGQHVNTTDSAVRI 252 R++GAGGQHVNTTDSAV++ Sbjct: 22 VRSTGAGGQHVNTTDSAVQL 41 >gi|296101362|ref|YP_003611508.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055821|gb|ADF60559.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 140 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 24/91 (26%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIPTG- 258 + I +++ I RA GAGGQHVN +A+ + H+ T Sbjct: 8 VSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPEYYKESLLAASHHLITSD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 +V++ Q+ RSQ N+ A L A + EL Sbjct: 68 GVIVIKAQEYRSQELNREAAMARLVAVIKEL 98 >gi|238787211|ref|ZP_04631010.1| hypothetical protein yfred0001_31960 [Yersinia frederiksenii ATCC 33641] gi|238724473|gb|EEQ16114.1| hypothetical protein yfred0001_31960 [Yersinia frederiksenii ATCC 33641] Length = 164 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258 I +++S+ + RA GAGGQHVN T +A+ + +H+ T Sbjct: 8 ISLADSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLALNSHLMTAE 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282 ++++ Q+ RSQ N+ A L A Sbjct: 68 GVIIIKAQEYRSQDMNREAAQQRLVA 93 >gi|238763955|ref|ZP_04624911.1| hypothetical protein ykris0001_29320 [Yersinia kristensenii ATCC 33638] gi|238697772|gb|EEP90533.1| hypothetical protein ykris0001_29320 [Yersinia kristensenii ATCC 33638] Length = 138 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258 + + +S+ + RA GAGGQHVN T +A+ + +H+ T Sbjct: 8 VSLPDSEVELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAE 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282 ++++ Q+ RSQ N+ A L A Sbjct: 68 GVIIIKAQEYRSQDMNREAAQQRLVA 93 >gi|157147376|ref|YP_001454695.1| peptidyl-tRNA hydrolase domain protein [Citrobacter koseri ATCC BAA-895] gi|157084581|gb|ABV14259.1| hypothetical protein CKO_03174 [Citrobacter koseri ATCC BAA-895] Length = 140 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 24/91 (26%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I +++ I RA GAGGQHVN T +A +R + +P Sbjct: 8 VSIPDNELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASGLPEYYKERLLAASHHLISSD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL 287 GV +++ Q+ RSQ N+ A L A + EL Sbjct: 68 GVIIIKAQEYRSQELNREAAIARLVAVIKEL 98 >gi|326536273|ref|YP_004300714.1| hypothetical protein Acj133p133 [Acinetobacter phage 133] gi|299483354|gb|ADJ19448.1| hypothetical protein Acj133p133 [Acinetobacter phage 133] Length = 76 Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D R++ YR +G +N + R+THIP+G+ C E +NK +A + L ++ Sbjct: 9 DIRVEWYR-TGRAWTELNRAPTGCRLTHIPSGLTACCGTEHGSVRNKNEAMSRLEKRV 65 >gi|297794897|ref|XP_002865333.1| hypothetical protein ARALYDRAFT_917116 [Arabidopsis lyrata subsp. lyrata] gi|297311168|gb|EFH41592.1| hypothetical protein ARALYDRAFT_917116 [Arabidopsis lyrata subsp. lyrata] Length = 130 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 15/26 (57%), Positives = 19/26 (73%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRIT 253 CR++T+R SG GG+H N DSAV T Sbjct: 99 CRLETFRVSGPGGKHRNKRDSAVHST 124 >gi|123443461|ref|YP_001007434.1| peptidyl-tRNA hydrolase domain protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090422|emb|CAL13290.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 138 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258 + + +S+ + RA GAGGQHVN T +A+ + +H+ T Sbjct: 8 VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLSLNSHLMTAE 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282 ++++ Q+ RSQ N+ A L A Sbjct: 68 GVIIIKAQEYRSQDMNREAALARLVA 93 >gi|318606906|emb|CBY28404.1| hypothetical protein YaeJ with similarity to translation release factor [Yersinia enterocolitica subsp. palearctica Y11] Length = 138 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258 + + +S+ + RA GAGGQHVN T +A+ + +H+ T Sbjct: 8 VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLLLNSHLMTAE 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282 ++++ Q+ RSQ N+ A L A Sbjct: 68 GVIIIKAQEYRSQDMNREAALVRLVA 93 >gi|269968349|ref|ZP_06182368.1| hypothetical protein VMC_37980 [Vibrio alginolyticus 40B] gi|269827035|gb|EEZ81350.1| hypothetical protein VMC_37980 [Vibrio alginolyticus 40B] Length = 137 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 24/99 (24%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV------RITHIPTG---------------- 258 + I E + ++ RA G GGQ+VN SA+ R + +P Sbjct: 8 VTIQEWEIQLSPIRAQGNGGQNVNKVASAIHLRFDIRNSSLPDFYKERLLALSDSRISKD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 ++++ QQ R+Q +NK A N L+A + LQ+++ I Sbjct: 68 GVIIIKAQQFRTQEQNKEDALNRLQALIKAAALQEKKRI 106 >gi|262274222|ref|ZP_06052034.1| class I peptide chain release factor [Grimontia hollisae CIP 101886] gi|262222032|gb|EEY73345.1| class I peptide chain release factor [Grimontia hollisae CIP 101886] Length = 137 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 32/129 (24%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT----------------- 257 + I + + RA GAGGQHVN SAV + + +P Sbjct: 8 VSIPNDEIDLSYIRAQGAGGQHVNKVSSAVHLRFDINASSLPEFYKERLLALKDSRLSKD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL-ELQKREEIANIGES-------SKTEIGW 308 GV V++ QQ R+Q KN+ A L+A + + +QK S SKT+ G Sbjct: 68 GVIVIKAQQFRTQEKNREDALQRLQALVKSVTAVQKARRATKPTRSSQRKRMDSKTQRGK 127 Query: 309 GRQIRSYVL 317 + +R V+ Sbjct: 128 TKSLRGKVM 136 >gi|332160616|ref|YP_004297193.1| peptidyl-tRNA hydrolase domain protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664846|gb|ADZ41490.1| peptidyl-tRNA hydrolase domain protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860910|emb|CBX71190.1| uncharacterized protein yaeJ [Yersinia enterocolitica W22703] Length = 138 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 24/86 (27%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI---------------------THIPTG- 258 + + +S+ + RA GAGGQHVN T +A+ + +H+ T Sbjct: 8 VSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPEYYKERLLSLNSHLMTAE 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRA 282 ++++ Q+ RSQ N+ A L A Sbjct: 68 GVIIIKAQEYRSQDMNREAALVRLVA 93 >gi|157377219|ref|YP_001475819.1| hypothetical protein Ssed_4087 [Shewanella sediminis HAW-EB3] gi|157319593|gb|ABV38691.1| class I peptide chain release factor [Shewanella sediminis HAW-EB3] Length = 142 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 24/110 (21%) Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIP--------- 256 + ++ S + + E++ R+SGAGGQH+N +A +I + +P Sbjct: 3 FAMIKISNSVSLQENEIEWQFIRSSGAGGQHINKVSTAAQIIFDIKASSLPDFYKQALLK 62 Query: 257 --------TG-VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 +G V+++CQQ RSQ N+ A + + + ++ IA Sbjct: 63 KADHRITKSGKVIIKCQQSRSQDFNRQTALAQFIELIASVAITQKRRIAT 112 >gi|332095133|gb|EGJ00165.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii 5216-82] Length = 140 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|209917382|ref|YP_002291466.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SE11] gi|209910641|dbj|BAG75715.1| conserved hypothetical protein [Escherichia coli SE11] gi|324017841|gb|EGB87060.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 117-3] Length = 140 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 24/96 (25%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 8 VAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 68 GVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|89900179|ref|YP_522650.1| class I peptide chain release factor [Rhodoferax ferrireducens T118] gi|89344916|gb|ABD69119.1| Class I peptide chain release factor [Rhodoferax ferrireducens T118] Length = 141 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 28/91 (30%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPTGV--------------- 259 ++I+E++ + RA GAGGQ+VN SA+ + + +P V Sbjct: 10 LQINEAEVELSAIRAQGAGGQNVNKVSSAIHLRFDIAASSLPQDVKERLLALHDSRITKD 69 Query: 260 ---VVQCQQERSQHKNKAQAWNMLRAKLYEL 287 V++ QQ+R+Q N+ A +L+EL Sbjct: 70 GVLVIKAQQQRTQEMNRLDAL----MRLHEL 96 >gi|283477406|emb|CAY73322.1| Uncharacterized 15.2 kDa protein in pcaJ 3'region [Erwinia pyrifoliae DSM 12163] Length = 138 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 24/91 (26%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVR--------------------ITH---IPT 257 I + +++ + RA GAGGQHVN + +A+ ++H P Sbjct: 8 IVVPDAEIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASSLPDFYQQRMLAVSHHLITPE 67 Query: 258 G-VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 G V+++ Q+ RSQ N+ A L + EL Sbjct: 68 GMVIIKAQEYRSQEMNRDAALKRLENLIIEL 98 >gi|15799873|ref|NP_285885.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 EDL933] gi|15829447|ref|NP_308220.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. Sakai] gi|168752175|ref|ZP_02777197.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4113] gi|168758716|ref|ZP_02783723.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4401] gi|168764945|ref|ZP_02789952.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4501] gi|168769960|ref|ZP_02794967.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4486] gi|168777700|ref|ZP_02802707.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4196] gi|168782085|ref|ZP_02807092.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4076] gi|168789302|ref|ZP_02814309.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC869] gi|168802463|ref|ZP_02827470.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC508] gi|195939888|ref|ZP_03085270.1| hypothetical protein EscherichcoliO157_26391 [Escherichia coli O157:H7 str. EC4024] gi|208807788|ref|ZP_03250125.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4206] gi|208814264|ref|ZP_03255593.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4045] gi|208820681|ref|ZP_03261001.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4042] gi|209397979|ref|YP_002268800.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4115] gi|217326506|ref|ZP_03442590.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. TW14588] gi|254791324|ref|YP_003076161.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli O157:H7 str. TW14359] gi|261226946|ref|ZP_05941227.1| hypothetical protein EscherichiacoliO157_20487 [Escherichia coli O157:H7 str. FRIK2000] gi|261255350|ref|ZP_05947883.1| hypothetical protein EscherichiacoliO157EcO_05914 [Escherichia coli O157:H7 str. FRIK966] gi|12512922|gb|AAG54493.1|AE005195_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13359649|dbj|BAB33616.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187767117|gb|EDU30961.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4196] gi|188013923|gb|EDU52045.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4113] gi|189000423|gb|EDU69409.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4076] gi|189354517|gb|EDU72936.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4401] gi|189361069|gb|EDU79488.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4486] gi|189365142|gb|EDU83558.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4501] gi|189371137|gb|EDU89553.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC869] gi|189375543|gb|EDU93959.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC508] gi|208727589|gb|EDZ77190.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4206] gi|208735541|gb|EDZ84228.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4045] gi|208740804|gb|EDZ88486.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4042] gi|209159379|gb|ACI36812.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC4115] gi|209748692|gb|ACI72653.1| hypothetical protein ECs0193 [Escherichia coli] gi|209748694|gb|ACI72654.1| hypothetical protein ECs0193 [Escherichia coli] gi|209748696|gb|ACI72655.1| hypothetical protein ECs0193 [Escherichia coli] gi|217322727|gb|EEC31151.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. TW14588] gi|254590724|gb|ACT70085.1| conserved protein [Escherichia coli O157:H7 str. TW14359] gi|320190282|gb|EFW64932.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. EC1212] gi|320639998|gb|EFX09583.1| hypothetical protein ECO5101_12093 [Escherichia coli O157:H7 str. G5101] gi|326339753|gb|EGD63561.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. 1044] gi|326345087|gb|EGD68830.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7 str. 1125] Length = 136 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 24/96 (25%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 8 VAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 68 GVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|270264796|ref|ZP_06193060.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13] gi|270041094|gb|EFA14194.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13] Length = 137 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 24/93 (25%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI--------------------- 252 +++ S + I +++ + RA GAGGQHVN T +A+ + Sbjct: 1 MLELSRNVAIPDNELELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALN 60 Query: 253 THIPTG---VVVQCQQERSQHKNKAQAWNMLRA 282 H+ T V+++ Q+ RSQ N+ A L A Sbjct: 61 NHLITADGVVIIKAQEYRSQELNREAALARLVA 93 >gi|82775583|ref|YP_401930.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae Sd197] gi|309787129|ref|ZP_07681741.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1617] gi|81239731|gb|ABB60441.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|308924707|gb|EFP70202.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1617] Length = 140 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 24/96 (25%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 + I + + I RA G GGQHVN T +A +R + +P Sbjct: 8 VAIPDGELEITAIRAQGVGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASYHLISSD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + EL +++ Sbjct: 68 GVIVIKAQEYRSQELNREAALARLVAVIKELTTEQK 103 >gi|254227756|ref|ZP_04921187.1| Protein chain release factor B [Vibrio sp. Ex25] gi|262395799|ref|YP_003287652.1| class I peptide chain release factor [Vibrio sp. Ex25] gi|151939798|gb|EDN58625.1| Protein chain release factor B [Vibrio sp. Ex25] gi|262339393|gb|ACY53187.1| class I peptide chain release factor [Vibrio sp. Ex25] Length = 137 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 24/99 (24%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAV------RITHIPTG---------------- 258 + I E + ++ RA G GGQ+VN SA+ R + +P Sbjct: 8 VTIQEWEIQLSPIRAQGNGGQNVNKVASAIHLRFDIRHSSLPDFYKERLLALSDSRITKD 67 Query: 259 --VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 ++++ QQ R+Q +NK A N L+A + LQ+++ I Sbjct: 68 GVIIIKAQQFRTQEQNKEDALNRLQALIKAAALQEKKRI 106 >gi|194439906|ref|ZP_03071968.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 101-1] gi|253774781|ref|YP_003037612.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160311|ref|YP_003043419.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B str. REL606] gi|300932150|ref|ZP_07147433.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 187-1] gi|312970293|ref|ZP_07784475.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1827-70] gi|194421152|gb|EDX37177.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 101-1] gi|242376023|emb|CAQ30706.1| conserved protein [Escherichia coli BL21(DE3)] gi|253325825|gb|ACT30427.1| Class I peptide chain release factor [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972212|gb|ACT37883.1| hypothetical protein ECB_00190 [Escherichia coli B str. REL606] gi|253976421|gb|ACT42091.1| hypothetical protein ECD_00190 [Escherichia coli BL21(DE3)] gi|300460087|gb|EFK23580.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 187-1] gi|310337791|gb|EFQ02902.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1827-70] gi|323959953|gb|EGB55600.1| RF-1 domain-containing protein [Escherichia coli H489] gi|323970671|gb|EGB65927.1| RF-1 domain-containing protein [Escherichia coli TA007] Length = 140 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|82542790|ref|YP_406737.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii Sb227] gi|81244201|gb|ABB64909.1| conserved hypothetical protein [Shigella boydii Sb227] gi|320186614|gb|EFW61339.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri CDC 796-83] gi|332098782|gb|EGJ03742.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii 3594-74] Length = 140 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|157157087|ref|YP_001461361.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E24377A] gi|157159657|ref|YP_001456975.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS] gi|187732441|ref|YP_001878994.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella boydii CDC 3083-94] gi|188494154|ref|ZP_03001424.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 53638] gi|191167036|ref|ZP_03028858.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A] gi|193063171|ref|ZP_03044262.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22] gi|193067745|ref|ZP_03048712.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E110019] gi|194428309|ref|ZP_03060851.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171] gi|194435008|ref|ZP_03067249.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012] gi|218552773|ref|YP_002385686.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli IAI1] gi|218693657|ref|YP_002401324.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 55989] gi|254037611|ref|ZP_04871688.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia sp. 1_1_43] gi|256021624|ref|ZP_05435489.1| peptidyl-tRNA hydrolase domain protein [Shigella sp. D9] gi|260853402|ref|YP_003227293.1| hypothetical protein ECO26_0194 [Escherichia coli O26:H11 str. 11368] gi|291281014|ref|YP_003497832.1| hypothetical protein G2583_0195 [Escherichia coli O55:H7 str. CB9615] gi|293476849|ref|ZP_06665257.1| yaeJ protein [Escherichia coli B088] gi|300816232|ref|ZP_07096455.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 107-1] gi|300824085|ref|ZP_07104205.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 119-7] gi|300902011|ref|ZP_07120038.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 84-1] gi|300920122|ref|ZP_07136575.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 115-1] gi|300923016|ref|ZP_07139083.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 182-1] gi|300938601|ref|ZP_07153333.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 21-1] gi|301305328|ref|ZP_07211424.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 124-1] gi|301330006|ref|ZP_07222693.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 78-1] gi|307311360|ref|ZP_07591002.1| Class I peptide chain release factor [Escherichia coli W] gi|309796369|ref|ZP_07690778.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 145-7] gi|331666433|ref|ZP_08367314.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271] gi|331680771|ref|ZP_08381430.1| aminoacyl-tRNA hydrolase [Escherichia coli H591] gi|332282866|ref|ZP_08395279.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9] gi|157065337|gb|ABV04592.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS] gi|157079117|gb|ABV18825.1| putative peptidyl-tRNA hydrolase [Escherichia coli E24377A] gi|187429433|gb|ACD08707.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii CDC 3083-94] gi|188489353|gb|EDU64456.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 53638] gi|190902929|gb|EDV62656.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A] gi|192931079|gb|EDV83682.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22] gi|192959157|gb|EDV89593.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E110019] gi|194413684|gb|EDX29964.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171] gi|194416744|gb|EDX32872.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012] gi|218350389|emb|CAU96072.1| conserved hypothetical protein [Escherichia coli 55989] gi|218359541|emb|CAQ97079.1| conserved hypothetical protein [Escherichia coli IAI1] gi|226840717|gb|EEH72719.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia sp. 1_1_43] gi|257752051|dbj|BAI23553.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368] gi|290760887|gb|ADD54848.1| hypothetical protein G2583_0195 [Escherichia coli O55:H7 str. CB9615] gi|291321302|gb|EFE60744.1| yaeJ protein [Escherichia coli B088] gi|300405897|gb|EFJ89435.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 84-1] gi|300412856|gb|EFJ96166.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 115-1] gi|300420643|gb|EFK03954.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 182-1] gi|300456447|gb|EFK19940.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 21-1] gi|300523362|gb|EFK44431.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 119-7] gi|300531439|gb|EFK52501.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 107-1] gi|300839433|gb|EFK67193.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 124-1] gi|300843960|gb|EFK71720.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 78-1] gi|306908339|gb|EFN38837.1| Class I peptide chain release factor [Escherichia coli W] gi|308120073|gb|EFO57335.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 145-7] gi|315059410|gb|ADT73737.1| conserved hypothetical protein [Escherichia coli W] gi|315254994|gb|EFU34962.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1] gi|320180900|gb|EFW55822.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii ATCC 9905] gi|320196931|gb|EFW71552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli WV_060327] gi|320200282|gb|EFW74868.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli EC4100B] gi|320644768|gb|EFX13812.1| hypothetical protein ECO9389_12489 [Escherichia coli O157:H- str. 493-89] gi|320652924|gb|EFX21162.1| hypothetical protein ECO2687_24853 [Escherichia coli O157:H- str. H 2687] gi|320658312|gb|EFX26041.1| hypothetical protein ECO7815_24381 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663622|gb|EFX30906.1| hypothetical protein ECO5905_24126 [Escherichia coli O55:H7 str. USDA 5905] gi|320668935|gb|EFX35730.1| hypothetical protein ECOSU61_24498 [Escherichia coli O157:H7 str. LSU-61] gi|323157971|gb|EFZ44073.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli EPECa14] gi|323160241|gb|EFZ46199.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E128010] gi|323170984|gb|EFZ56633.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli LT-68] gi|323181700|gb|EFZ67114.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1357] gi|323380031|gb|ADX52299.1| Class I peptide chain release factor [Escherichia coli KO11] gi|323945669|gb|EGB41718.1| RF-1 domain-containing protein [Escherichia coli H120] gi|324118312|gb|EGC12207.1| RF-1 domain-containing protein [Escherichia coli E1167] gi|331066644|gb|EGI38521.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271] gi|331072234|gb|EGI43570.1| aminoacyl-tRNA hydrolase [Escherichia coli H591] gi|332097593|gb|EGJ02570.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 155-74] gi|332105218|gb|EGJ08564.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9] Length = 140 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|259907565|ref|YP_002647921.1| peptidyl-tRNA hydrolase domain protein [Erwinia pyrifoliae Ep1/96] gi|224963187|emb|CAX54671.1| conserved uncharacterized protein YaeJ [Erwinia pyrifoliae Ep1/96] gi|310764927|gb|ADP09877.1| peptidyl-tRNA hydrolase domain protein [Erwinia sp. Ejp617] Length = 136 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 24/91 (26%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVR--------------------ITH---IPT 257 I + +++ + RA GAGGQHVN + +A+ ++H P Sbjct: 6 IVVPDAEIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASSLPDFYQQRMLAVSHHLITPE 65 Query: 258 G-VVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 G V+++ Q+ RSQ N+ A L + EL Sbjct: 66 GMVIIKAQEYRSQEMNRDAALKRLENLIIEL 96 >gi|33593628|ref|NP_881272.1| hypothetical protein BP2658 [Bordetella pertussis Tohama I] gi|33595904|ref|NP_883547.1| hypothetical protein BPP1232 [Bordetella parapertussis 12822] gi|33597646|ref|NP_885289.1| hypothetical protein BPP3112 [Bordetella parapertussis 12822] gi|33602050|ref|NP_889610.1| hypothetical protein BB3074 [Bordetella bronchiseptica RB50] gi|33563701|emb|CAE42934.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|33565983|emb|CAE36534.1| conserved hypothetical protein [Bordetella parapertussis] gi|33574074|emb|CAE38398.1| conserved hypothetical protein [Bordetella parapertussis] gi|33576488|emb|CAE33566.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] gi|332383033|gb|AEE67880.1| peptidyl-tRNA hydrolase domain protein [Bordetella pertussis CS] Length = 138 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 24/78 (30%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTGV----------------- 259 + E + D RA GAGGQ+VN SA VR + +P V Sbjct: 10 LDERELDFDMIRAQGAGGQNVNKVSSAIHLRFDVRASSLPDSVKETVLALADRRISSDGV 69 Query: 260 -VVQCQQERSQHKNKAQA 276 V++ Q RSQ KN+A A Sbjct: 70 IVIKAQTHRSQEKNRADA 87 >gi|260842424|ref|YP_003220202.1| hypothetical protein ECO103_0190 [Escherichia coli O103:H2 str. 12009] gi|257757571|dbj|BAI29068.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009] Length = 140 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|311106692|ref|YP_003979545.1| peptidyl-tRNA hydrolase domain-containing protein [Achromobacter xylosoxidans A8] gi|310761381|gb|ADP16830.1| peptidyl-tRNA hydrolase domain protein [Achromobacter xylosoxidans A8] Length = 138 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 26/90 (28%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTG---------- 258 V DSI ++ E D RA GAGGQ+VN SA VR + +P Sbjct: 4 VQDSIYLD--ERDLAFTMIRAQGAGGQNVNKVSSAVHLRFDVRASSLPEEIKEALCALSD 61 Query: 259 --------VVVQCQQERSQHKNKAQAWNML 280 +V++ Q RSQ KN+A+A L Sbjct: 62 HRVSKDGVIVIKSQAFRSQEKNRAEAIERL 91 >gi|110640411|ref|YP_668139.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 536] gi|191172758|ref|ZP_03034295.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11] gi|300990439|ref|ZP_07179207.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 200-1] gi|110342003|gb|ABG68240.1| peptidyl-tRNA hydrolase [Escherichia coli 536] gi|190906908|gb|EDV66510.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11] gi|254966722|gb|ACT97354.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium AM_gF3SD01_02] gi|254966729|gb|ACT97359.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium AM_gF3SD01_04] gi|254966742|gb|ACT97368.1| hypothetical protein [mixed culture bacterium AM_gF3SD01_08] gi|300305739|gb|EFJ60259.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 200-1] gi|324014123|gb|EGB83342.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 60-1] Length = 140 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|322831612|ref|YP_004211639.1| Class I peptide chain release factor [Rahnella sp. Y9602] gi|321166813|gb|ADW72512.1| Class I peptide chain release factor [Rahnella sp. Y9602] Length = 136 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH-IPTGVVVQCQQER----SQHKN 272 S ++EI +S+ + RA G GGQ+VN T +A+ + I + + +ER + H Sbjct: 5 SGKLEIPDSEIELTAIRAQGNGGQNVNKTSTAIHLRFDIKASSLPEYYKERLLAFNHHSV 64 Query: 273 KAQAWNMLRAKLYELELQKRE-EIANIG 299 A W +++A+ Y + RE +A +G Sbjct: 65 TADGWVIIKAQEYRSQEMNREAALARLG 92 >gi|209901303|ref|YP_002290942.1| hypothetical protein phiCD27_gp66 [Clostridium phage phiCD27] gi|199612184|gb|ACH91357.1| hypothetical protein [Clostridium phage phiCD27] Length = 113 Score = 37.0 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 + D +V +THIPTG+ V+C+ S KNK + +L +L ++ Sbjct: 61 SKDYSVEVTHIPTGITVKCRSTNSILKNKNKCLEILEEELIKI 103 >gi|24111627|ref|NP_706137.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str. 301] gi|30061748|ref|NP_835919.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str. 2457T] gi|110804243|ref|YP_687763.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella flexneri 5 str. 8401] gi|24050398|gb|AAN41844.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30039990|gb|AAP15724.1| hypothetical protein S0184 [Shigella flexneri 2a str. 2457T] gi|110613791|gb|ABF02458.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|281599547|gb|ADA72531.1| Peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2002017] gi|313646747|gb|EFS11206.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str. 2457T] gi|332762021|gb|EGJ92292.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2747-71] gi|332762196|gb|EGJ92465.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 4343-70] gi|332765041|gb|EGJ95269.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-671] gi|332768695|gb|EGJ98875.1| putative-tRNA hydrolase domain protein [Shigella flexneri 2930-71] gi|333009346|gb|EGK28802.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-218] gi|333022233|gb|EGK41472.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-304] Length = 140 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 24/94 (25%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL 287 GV V++ Q+ RSQ N+ A L A + +L Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDL 98 >gi|170021455|ref|YP_001726409.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli ATCC 8739] gi|169756383|gb|ACA79082.1| Class I peptide chain release factor [Escherichia coli ATCC 8739] Length = 140 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|157371995|ref|YP_001479984.1| peptidyl-tRNA hydrolase domain-containing protein [Serratia proteamaculans 568] gi|157323759|gb|ABV42856.1| Class I peptide chain release factor [Serratia proteamaculans 568] Length = 137 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 24/91 (26%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI--------------------- 252 +++ S + I +++ + RA GAGGQHVN T +A+ + Sbjct: 1 MLELSRNVAIPDNEVELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALN 60 Query: 253 THIPTG---VVVQCQQERSQHKNKAQAWNML 280 H+ T V+++ Q+ RSQ N+ A L Sbjct: 61 NHLITADGVVIIKAQEYRSQELNREAALARL 91 >gi|317047005|ref|YP_004114653.1| Class I peptide chain release factor [Pantoea sp. At-9b] gi|316948622|gb|ADU68097.1| Class I peptide chain release factor [Pantoea sp. At-9b] Length = 136 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 24/87 (27%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT---------------------HIP 256 S + + E++ + RA GAGGQHVN T +A+ + H+ Sbjct: 5 SRSVSLPENEVELSAIRAQGAGGQHVNKTSTAIHLRFDINASSLPPFYKERLLGARHHLI 64 Query: 257 T--GVV-VQCQQERSQHKNKAQAWNML 280 T GVV ++ Q+ RSQ N+ A L Sbjct: 65 TEDGVVIIKAQEYRSQEMNREAALQRL 91 >gi|205351577|ref|YP_002225378.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271358|emb|CAR36151.1| putative release factor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626604|gb|EGE32947.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 140 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 22/32 (68%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + I++++ I RA GAGGQHVN T SA+ + Sbjct: 8 VSIADNELEITAIRAQGAGGQHVNKTSSAIHL 39 >gi|259418312|ref|ZP_05742230.1| putative peptide chain release factor H [Silicibacter sp. TrichCH4B] gi|259345707|gb|EEW57551.1| putative peptide chain release factor H [Silicibacter sp. TrichCH4B] Length = 211 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 5/112 (4%) Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G SA +++ G A +GV S +R F I+ P + ++ Sbjct: 50 GPSSAVVILSGTQASALALSVEGVILWRCQSELRPKHKRKNWFVQIFRLPTTTKVVSVD- 108 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHI-PTGVV--VQCQQERSQHKN 272 + + RA G GGQH N T SA+R + P V V + RSQH+N Sbjct: 109 -PASVEMQAIRAGGPGGQHQNKTSSAIRARWVSPHKQVYSVVVRDSRSQHQN 159 >gi|218698859|ref|YP_002406488.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli IAI39] gi|218368845|emb|CAR16594.1| conserved hypothetical protein [Escherichia coli IAI39] Length = 140 Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|288958700|ref|YP_003449041.1| hypothetical protein AZL_018590 [Azospirillum sp. B510] gi|288911008|dbj|BAI72497.1| hypothetical protein AZL_018590 [Azospirillum sp. B510] Length = 140 Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 24/32 (75%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I + ES+ + + RASG GGQHVN T++AV++ Sbjct: 8 ISLDESELQEEFVRASGPGGQHVNKTETAVQL 39 >gi|170578563|ref|XP_001894460.1| peptide chain release factor 2, programmed [Brugia malayi] gi|170584020|ref|XP_001896825.1| peptide chain release factor 2, programmed [Brugia malayi] gi|158595842|gb|EDP34329.1| peptide chain release factor 2, programmed, putative [Brugia malayi] gi|158598945|gb|EDP36701.1| peptide chain release factor 2, programmed, putative [Brugia malayi] Length = 93 Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +++E + N I +++ D + L++ ++E+D E + L + + V+ K+ Sbjct: 10 ILKEYSKIKNDIESFSKLESDYNDAISLMKSTIDENDEEFFSEIENELLKSEKLVKRKET 69 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQD 132 L + AD+ E+H+G GGTES D Sbjct: 70 NFLFTDGADNT----EIHSGVGGTESDD 93 >gi|26246139|ref|NP_752178.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli CFT073] gi|218688067|ref|YP_002396279.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli ED1a] gi|227884895|ref|ZP_04002700.1| Trna hydrolase domain protein [Escherichia coli 83972] gi|300993587|ref|ZP_07180443.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 45-1] gi|301049894|ref|ZP_07196820.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 185-1] gi|306815209|ref|ZP_07449358.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli NC101] gi|331645335|ref|ZP_08346446.1| aminoacyl-tRNA hydrolase [Escherichia coli M605] gi|331681577|ref|ZP_08382214.1| aminoacyl-tRNA hydrolase [Escherichia coli H299] gi|26106536|gb|AAN78722.1|AE016755_222 Hypothetical protein yaeJ [Escherichia coli CFT073] gi|218425631|emb|CAR06417.1| conserved hypothetical protein [Escherichia coli ED1a] gi|222032022|emb|CAP74761.1| Uncharacterized protein yaeJ [Escherichia coli LF82] gi|227838033|gb|EEJ48499.1| Trna hydrolase domain protein [Escherichia coli 83972] gi|254966714|gb|ACT97348.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium AM_gF1DD01_14] gi|281177417|dbj|BAI53747.1| conserved hypothetical protein [Escherichia coli SE15] gi|300298347|gb|EFJ54732.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 185-1] gi|300406510|gb|EFJ90048.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 45-1] gi|305850871|gb|EFM51326.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli NC101] gi|307552042|gb|ADN44817.1| peptidyl-tRNA hydrolase [Escherichia coli ABU 83972] gi|312944800|gb|ADR25627.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O83:H1 str. NRG 857C] gi|315294596|gb|EFU53943.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 153-1] gi|315300664|gb|EFU59891.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 16-3] gi|330910042|gb|EGH38552.1| YaeJ-like protein [Escherichia coli AA86] gi|331046092|gb|EGI18211.1| aminoacyl-tRNA hydrolase [Escherichia coli M605] gi|331081798|gb|EGI52959.1| aminoacyl-tRNA hydrolase [Escherichia coli H299] Length = 140 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|295098680|emb|CBK87770.1| Protein chain release factor B [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 138 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 24/91 (26%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIP-----------------T 257 + I +++ I RA GAGGQHVN +A +R + +P Sbjct: 8 VSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPEYYKESLLAASHHLITSE 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYEL 287 GV V++ Q+ RSQ N+ A L A + EL Sbjct: 68 GVMVIKAQEYRSQELNREAAIARLVAVIKEL 98 >gi|254966702|gb|ACT97339.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture bacterium AM_gF1DD01_09] Length = 140 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I +++ I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDNEYEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|311743919|ref|ZP_07717725.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272] gi|311313049|gb|EFQ82960.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272] Length = 135 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 28/78 (35%) Query: 234 RASGAGGQHVNTTDSAV------------------------RITHIPTGVVVQCQQERSQ 269 R+SGAGGQHVNTTD+ V R + + V Q RSQ Sbjct: 17 RSSGAGGQHVNTTDTRVELLWDLRATTALSAAQRDRAADVLRSRLVDGTITVVSSQYRSQ 76 Query: 270 HKNKAQAWNMLRAKLYEL 287 H+N+ A RA+L +L Sbjct: 77 HRNREAA----RARLEDL 90 >gi|320173327|gb|EFW48530.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae CDC 74-1112] Length = 120 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 24/99 (24%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257 S + I + + I RA GAGGQHVN T +A +R + +P Sbjct: 5 SRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLI 64 Query: 258 ---GVV-VQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV+ ++ Q+ RSQ N+ A L A + +L +++ Sbjct: 65 SSDGVIAIKAQEYRSQELNREAALARLVAVIKDLTTEQK 103 >gi|311280839|ref|YP_003943070.1| Class I peptide chain release factor [Enterobacter cloacae SCF1] gi|308750034|gb|ADO49786.1| Class I peptide chain release factor [Enterobacter cloacae SCF1] Length = 140 Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 25/108 (23%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIP-----------------T 257 + +++ + I RA GAGGQHVN T +A +R + +P Sbjct: 8 VVLADDEVEITAVRAQGAGGQHVNKTSTAIHLRFDIRASSLPEEYKTRLLAASHHLISAE 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGESSK 303 GV +++ Q+ RSQ N+ A L + + L +QKR + ++SK Sbjct: 68 GVIIIKAQEYRSQEMNREAALARLVSVIQTLTVVQKRRKATRPTKASK 115 >gi|293408284|ref|ZP_06652124.1| yaeJ protein [Escherichia coli B354] gi|291472535|gb|EFF15017.1| yaeJ protein [Escherichia coli B354] Length = 140 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 24/96 (25%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT----------------- 257 I I + + I RA GAGGQHVN T +A +R + +P Sbjct: 8 IAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSD 67 Query: 258 GV-VVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 GV V++ Q+ R+Q N+ A L A + +L +++ Sbjct: 68 GVIVIKAQEYRNQELNREAALARLVAVIKDLTTEQK 103 >gi|289806047|ref|ZP_06536676.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 41 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SYVL + +KDLRT +E + VLDG LD F++A+L Sbjct: 1 SYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASL 37 >gi|119509957|ref|ZP_01629099.1| hypothetical protein N9414_05739 [Nodularia spumigena CCY9414] gi|119465423|gb|EAW46318.1| hypothetical protein N9414_05739 [Nodularia spumigena CCY9414] Length = 137 Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 24/88 (27%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI------THIPT-------------- 257 S +I I +S+ + R+ GAGGQ+VN +A+ + + +P Sbjct: 5 SRKIMIPDSEIEMSAIRSQGAGGQNVNKVSTAIHLRFDIEASSLPAFYKEQLMKLNDRRI 64 Query: 258 ---GV-VVQCQQERSQHKNKAQAWNMLR 281 GV V++ Q+ RSQ KN+ +A L+ Sbjct: 65 TQEGVIVIKAQEYRSQEKNREEALQRLK 92 >gi|237811675|ref|YP_002896126.1| class I peptide chain release factor [Burkholderia pseudomallei MSHR346] gi|237504180|gb|ACQ96498.1| class I peptide chain release factor [Burkholderia pseudomallei MSHR346] Length = 134 Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 37/132 (28%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPTGV------------ 259 ++ S+ + + RA GAGGQ+VN SA +R + +P V Sbjct: 2 TLRYAFSQDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQRI 61 Query: 260 ------VVQCQQERSQHKNKAQAWNML-------------RAKLYELELQKREEIANIGE 300 V++ Q+ R+Q KN+A A L R K +A G Sbjct: 62 TREGVIVIKAQEYRTQEKNRAVALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKGR 121 Query: 301 SSKTEIGWGRQI 312 S+ + G GR + Sbjct: 122 RSEVKSGRGRVV 133 >gi|157960364|ref|YP_001500398.1| peptidyl-tRNA hydrolase domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845364|gb|ABV85863.1| Class I peptide chain release factor [Shewanella pealeana ATCC 700345] Length = 140 Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 26/107 (24%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIP------------ 256 + +S+ I+ SE + + R+SGAGGQH+N +A ++ + +P Sbjct: 6 ISNSVSIQDSELEWQF--IRSSGAGGQHLNKVSTAAQLIFDIKTSSLPEYYQQRLLAKAD 63 Query: 257 -----TG-VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 +G ++++CQQ RSQ N+ A A + + +++ IA Sbjct: 64 HRITKSGKIIIKCQQSRSQDFNRQTALEQFIALVASVNAVQKKRIAT 110 >gi|148253239|ref|YP_001237824.1| peptidyl-tRNA hydrolase domain-containing protein [Bradyrhizobium sp. BTAi1] gi|146405412|gb|ABQ33918.1| putative Class I peptide chain release factor domain protein [Bradyrhizobium sp. BTAi1] Length = 139 Score = 35.8 bits (81), Expect = 10.0, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 26/94 (27%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAV-------RITHIP-------------- 256 S ++ I E+D I RASG GGQ+VN ++ RIT +P Sbjct: 5 SRDLAIDENDIEISFVRASGPGGQNVNKLSTSAQLRFDTSRIT-LPEDAAARLARLAGQR 63 Query: 257 ---TGV-VVQCQQERSQHKNKAQAWNMLRAKLYE 286 GV V+Q ++ R+Q +NKA A L L E Sbjct: 64 MTKNGVIVIQAERFRTQERNKADAIERLVTLLRE 97 Searching..................................................done Results from round 2 >gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus str. psy62] gi|254040430|gb|ACT57226.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus str. psy62] Length = 355 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 355/355 (100%), Positives = 355/355 (100%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK Sbjct: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE Sbjct: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW Sbjct: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG Sbjct: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE Sbjct: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK Sbjct: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 >gi|315121916|ref|YP_004062405.1| peptide chain release factor 2 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495318|gb|ADR51917.1| peptide chain release factor 2 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 354 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 296/349 (84%), Positives = 329/349 (94%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 +NCLGGLFDWDNA++RL FLN K E+P+LW+ V EAK+LMRERQHLDNA+S +K +QDRL Sbjct: 1 MNCLGGLFDWDNALKRLHFLNDKAENPNLWEKVEEAKILMRERQHLDNAVSSLKALQDRL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 DN+ LL+LA+EE++ S+LQE+ DNL+++KL+ EYKQFESL SGEADSND YLEVHAGAG Sbjct: 61 DDNIALLDLAVEENNSSVLQESLDNLKQLKLDTEYKQFESLFSGEADSNDVYLEVHAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWANML+RMY RW+E+RKFK + LE+HDGEEAGIKSATLLIKGPNAYGWLK EQG Sbjct: 121 GTESQDWANMLVRMYIRWSERRKFKIDLLEVHDGEEAGIKSATLLIKGPNAYGWLKEEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISPYDSNSRRHTSFSS+WVYPVVD+SIEIEI+ESDCRIDTYRASGAGGQHVNTT Sbjct: 181 VHRLVRISPYDSNSRRHTSFSSVWVYPVVDESIEIEINESDCRIDTYRASGAGGQHVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY+LELQKREEIANIGESSKTEI Sbjct: 241 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYDLELQKREEIANIGESSKTEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 GWGRQIRSYVLQPYQMVKDLRTNIEK+SP DVL+GDLDDFMKA LA+KK Sbjct: 301 GWGRQIRSYVLQPYQMVKDLRTNIEKSSPLDVLNGDLDDFMKAALALKK 349 >gi|317130277|ref|YP_004096559.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM 2522] gi|315475225|gb|ADU31828.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM 2522] Length = 366 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 172/352 (48%), Positives = 232/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++LN G D + R++ L DP W N A+ ++ E L + +E+ Sbjct: 13 MAKRLNDFRGSLDLEEKETRIAELEELMSDPSFWDNQDNAQKIISENNALKEMVDTYREL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D + EL EE D + + ++ + + + + LLS D N+A LE+H Sbjct: 73 EAEQEDLDVSYELVKEEGDEELAADLHAGIKELGKKFNDFELQLLLSEPYDKNNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMY RWA+ + FK E L+ G+EAG+KS TL+I G NAYG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYQRWADDKGFKVETLDYLPGDEAGVKSVTLMISGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +DD++EIEIS +IDTYRASGAGGQH Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIEISPDQLKIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+PT VV CQ ERSQ KN+ QA ML+AKL++LE++++++ + Sbjct: 253 INTTDSAVRITHLPTNTVVTCQSERSQIKNREQAMKMLKAKLFQLEIERQQQELDEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +++IGWG QIRSYV PY MVKD RTN E + V+DG+LD F+ A L K Sbjct: 313 QSDIGWGSQIRSYVFHPYNMVKDHRTNYETGNTQSVMDGELDPFIDAYLRSK 364 >gi|325578209|ref|ZP_08148344.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC 33392] gi|325159945|gb|EGC72074.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC 33392] Length = 364 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 183/347 (52%), Positives = 248/347 (71%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L C GG+FD+D V+RL +N + E P +W + +A+ L +ER L+ + IK ++ L Sbjct: 17 LLCFGGIFDFDAKVERLEEVNAELEQPDVWNDPEKAQALGKERVSLEQVVDTIKNLEQGL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E +D E L ++ ++ +F + SGE D+ D Y+++ AG+G Sbjct: 77 EDVEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G Sbjct: 137 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSF++++VYP +DD+I+IEI+ +D RID YRASGAGGQHVN T Sbjct: 197 IHRLVRKSPFDSNNRRHTSFAAVFVYPEIDDNIDIEINPADLRIDVYRASGAGGQHVNKT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++I Sbjct: 257 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 316 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 317 GWGSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 362 >gi|83718832|ref|YP_442414.1| peptide chain release factor 2 [Burkholderia thailandensis E264] gi|83652657|gb|ABC36720.1| peptide chain release factor 2, programmed [Burkholderia thailandensis E264] Length = 459 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 180/350 (51%), Positives = 252/350 (72%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G D+D +RL+ +N + EDP++W + A+ L RE++ L+ ++ + E+ Sbjct: 108 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLEGVVTTLTEL 167 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA EE+D L T + +++ V +F + S AD N+ ++++ Sbjct: 168 DNDLRDAQDLFDLAREENDEDTLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 227 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 228 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGDYAYGYLR 287 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 288 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 347 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 348 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 407 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 408 KTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 456 >gi|115352205|ref|YP_774044.1| peptide chain release factor 2 [Burkholderia ambifaria AMMD] gi|115282193|gb|ABI87710.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia ambifaria AMMD] Length = 406 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 179/345 (51%), Positives = 250/345 (72%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L Sbjct: 60 ASFGGIFDYDAKSARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 119 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L L ELA EE D L + D+ ++++ V +F + S AD N+ ++++ AGAGG Sbjct: 120 DALDLFELAREEGDEDTLVASEDDAKKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 179 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+ Sbjct: 180 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 239 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ +D RIDTYRASGAGGQH+N TD Sbjct: 240 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASGAGGQHINKTD 299 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + ESSKT++G Sbjct: 300 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVG 359 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 360 WGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLK 403 >gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1] gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1] Length = 373 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 183/353 (51%), Positives = 244/353 (69%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + G FD D +RLS + + P W + +A+ L ER HL+ + K Sbjct: 14 KLKEKYAEIRGYFDLDKMKRRLSEIEEEMASPDFWNDPKKAQSLSVERNHLEQELEAFKS 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D+ +L+E+A EE D S+L E L + ++ + + +LSGE D N+A + + Sbjct: 74 VEQKIEDSEVLIEMAEEEQDGSLLDEAEQMLSDLDKTLDRLEVKKVLSGEFDKNNAIVTI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA ML+RMY RWAE++ F+ E L++ + EEAGIKSATLLIKGP AYG+L Sbjct: 134 HAGAGGTESCDWAQMLMRMYIRWAERKGFEVEILDLQENEEAGIKSATLLIKGPYAYGFL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E G HRLVRISP+D+N+RRHTSF + V P +D+ IE+EI E D RIDTYRASGAGGQ Sbjct: 194 RAEHGTHRLVRISPFDANARRHTSFCGVIVVPEIDEDIEVEIKEEDLRIDTYRASGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITHIPTG+VV CQ ERSQ +N+ +A +L+A+LYELE QKREE Sbjct: 254 HVNKTDSAVRITHIPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAQARG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSY+ QPY++VKD RT +E ++ V+DGD+D F++A L K Sbjct: 314 EHKSIAWGNQIRSYIFQPYRLVKDHRTGVETSNIDAVMDGDIDLFIEAYLKQK 366 >gi|326575346|gb|EGE25274.1| peptide chain release factor 2 [Moraxella catarrhalis CO72] Length = 349 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 185/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD ++ +RL +N + E+P +W N A + +E+ LD + I + +L Sbjct: 3 KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLD 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D +LELA+E+DD S+L + L VE +F + SGE D+N+ YL++ +G+GG Sbjct: 63 DAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA MLLRMY RW E FK E LE+ +G AGIKSAT+++KG A+GWL+ E GV Sbjct: 123 TEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN+ RHTSF++++V P +DD+I I+I+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIGIDINPADLRIDTYRSSGAGGQHVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH PTGVVV CQ ERSQH NK A MLRAKLYELE+QKR E E SK++IG Sbjct: 243 SAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIG 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E ++ + VL+GDLD F++A+L Sbjct: 303 WGSQIRSYVLDDS-RIKDLRTGVETSNTTAVLNGDLDKFIEASLKA 347 >gi|93005664|ref|YP_580101.1| peptide chain release factor 2 [Psychrobacter cryohalolentis K5] gi|92393342|gb|ABE74617.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter cryohalolentis K5] Length = 349 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 186/343 (54%), Positives = 241/343 (70%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E+P LW + A + +E+ LD I + ++ L D Sbjct: 6 GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LELA+E +D S+L + L + V +F + SGE D N+ YL++ +G+GGTE+ Sbjct: 66 AMLELAVEAEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE FK E +E+ G AGIKSAT+ IKG A+GWL+ E GVHRL Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVEVIEVSSGSVAGIKSATIEIKGNYAFGWLRTEIGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAV Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+GVVV CQ ERSQH NKA A MLRAKLYELE+QKR E E K+++GWG Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 QIRSYVLDDS-RIKDLRTGVETFNTGAVLDGDLDQFIEASLKA 347 >gi|78066892|ref|YP_369661.1| peptide chain release factor 2 [Burkholderia sp. 383] gi|77967637|gb|ABB09017.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia sp. 383] Length = 391 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 179/345 (51%), Positives = 249/345 (72%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L Sbjct: 45 ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L L ELA EE D L + ++ ++ V +F + S AD N+ ++++ AGAGG Sbjct: 105 DALDLFELAREEGDEDTLVASEEDAAKLASRVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+ Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVSGEYAYGFLRTETGI 224 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + ESSKT++G Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 345 WGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLK 388 >gi|71065379|ref|YP_264106.1| peptide chain release factor 2 [Psychrobacter arcticus 273-4] gi|71038364|gb|AAZ18672.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter arcticus 273-4] Length = 349 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 185/343 (53%), Positives = 242/343 (70%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E+P LW + A + +E+ LD I + ++ L D Sbjct: 6 GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LELA+EE+D S+L + L + V +F + SGE D N+ YL++ +G+GGTE+ Sbjct: 66 AMLELAVEEEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE FK + +E+ G AGIKSAT+ IKG A+GWL+ E GVHRL Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVDVIEVSAGGVAGIKSATIEIKGDYAFGWLRTEIGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+ RHTSF++++V P +DD+IEI+++ +D RIDTYR+SGAGGQHVNTTDSAV Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDVNPADLRIDTYRSSGAGGQHVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+GVVV CQ ERSQH NKA A MLRAKLYELE+QKR E E K+++GWG Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 QIRSYVLDDS-RIKDLRTGVETFNTGAVLDGDLDQFIEASLKA 347 >gi|170733471|ref|YP_001765418.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3] gi|169816713|gb|ACA91296.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3] Length = 391 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 180/345 (52%), Positives = 250/345 (72%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L Sbjct: 45 ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L L ELA EE D L + D+ +++ V +F + S AD N+ ++++ AGAGG Sbjct: 105 DALDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+ Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 224 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + ESSKT++G Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 345 WGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLK 388 >gi|107028703|ref|YP_625798.1| peptide chain release factor 2 [Burkholderia cenocepacia AU 1054] gi|116690138|ref|YP_835761.1| peptide chain release factor 2 [Burkholderia cenocepacia HI2424] gi|105897867|gb|ABF80825.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia cenocepacia AU 1054] gi|116648227|gb|ABK08868.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia cenocepacia HI2424] Length = 391 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 180/345 (52%), Positives = 250/345 (72%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L Sbjct: 45 ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L L ELA EE D L + D+ +++ V +F + S AD N+ ++++ AGAGG Sbjct: 105 DALDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+ Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 224 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + ESSKT++G Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 345 WGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLK 388 >gi|291618681|ref|YP_003521423.1| PrfB [Pantoea ananatis LMG 20103] gi|291153711|gb|ADD78295.1| PrfB [Pantoea ananatis LMG 20103] Length = 430 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 178/344 (51%), Positives = 236/344 (68%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P +W A+ L +ER L+ + ++ L D Sbjct: 86 FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTFDQMSQGLEDV 145 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL+LA+E DD E L ++ ++ +F + SGE DS D Y+++ AG+GGTE Sbjct: 146 QGLLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 205 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ E GVHR Sbjct: 206 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 265 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 266 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 325 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E +K++IGWG Sbjct: 326 VRITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNKSDIGWG 385 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 386 SQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 428 >gi|218555439|ref|YP_002388352.1| peptide chain release factor 2 [Escherichia coli IAI1] gi|226739127|sp|B7LYF5|RF2_ECO8A RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|218362207|emb|CAQ99825.2| peptide chain release factor RF-2 [Escherichia coli IAI1] Length = 365 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 185/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|197285860|ref|YP_002151732.1| peptide chain release factor 2 [Proteus mirabilis HI4320] gi|238693208|sp|B4F0M7|RF2_PROMH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|194683347|emb|CAR44054.1| peptide chain release factor 2 [Proteus mirabilis HI4320] Length = 365 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 185/352 (52%), Positives = 245/352 (69%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++ + L G D+D +RL +N + E P +W +A+ L +ER L+ + I + Sbjct: 13 EVAERTQVLRGYLDYDAKKERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAIVETIDQ 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LL+LA+E DD E L+ + ++E +F + SGE DS D YL++ Sbjct: 73 LEQGLEDVSGLLDLAVEADDEETFNEAVAELEGLNKKLEQLEFRRMFSGEYDSADCYLDL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E DG+ AG+KSAT+ I G AYGWL Sbjct: 133 QAGSGGTEAQDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E Sbjct: 253 HVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|147569|gb|AAA24520.1| peptide chain release factor 2 [Escherichia coli] Length = 365 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 183/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH Sbjct: 194 TETGVHRVVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|332288942|ref|YP_004419794.1| peptide chain release factor 2 [Gallibacterium anatis UMN179] gi|330431838|gb|AEC16897.1| peptide chain release factor 2 [Gallibacterium anatis UMN179] Length = 351 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 184/344 (53%), Positives = 247/344 (71%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+DN V+RL ++ + E P +W + +A+ L +ER L+ ++ IK +Q L D Sbjct: 7 LGGIFDFDNKVERLEEVSAELEQPDVWNDPEKAQALGKERSSLEAVVNTIKSLQQGLDDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E DD + E L +++ + +F + SG D+ D Y+++ AG+GGTE Sbjct: 67 DGLLELAIEADDQATFDEAVAELDQLEQSLAKLEFRRMFSGANDAADCYVDLQAGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW MLLRMY RWAE + FK E +E+ DG+ AGIKSAT+ + G A+GWL+ E G+HR Sbjct: 127 AQDWTEMLLRMYLRWAESKGFKAELMEVSDGDVAGIKSATIRVSGEYAFGWLRTETGIHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+RRHTSFS+++VYP ++D I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 187 LVRKSPFDSNNRRHTSFSAVFVYPEINDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQHKNK QA L+AKLYELEL+K+ E SK++IGWG Sbjct: 247 VRITHMPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELKKKNAEKQALEESKSDIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349 >gi|312947424|gb|ADR28251.1| peptide chain release factor 2 [Escherichia coli O83:H1 str. NRG 857C] Length = 357 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 186/344 (54%), Positives = 237/344 (68%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL +N + E P +W A+ L +ER L+ + + +++ L D Sbjct: 13 LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDV 72 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE Sbjct: 73 SGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 132 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHR Sbjct: 133 AQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHR 192 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 193 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 252 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 253 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG 312 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 313 SQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 355 >gi|256821963|ref|YP_003145926.1| peptide chain release factor 2 [Kangiella koreensis DSM 16069] gi|256795502|gb|ACV26158.1| bacterial peptide chain release factor 2 (bRF- 2) [Kangiella koreensis DSM 16069] Length = 365 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 186/351 (52%), Positives = 258/351 (73%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S ++ L G D+D+ +RL + + E P +W + A+ L +ER L+ ++ IK++ Sbjct: 14 MSERVTTLRGYLDFDSKQERLVEVERELEQPDVWNDQERAQSLGQERAKLETVVNTIKDL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + DN LLEL++EEDD + E + ++++ +E +F + SGE D N+AYL++ Sbjct: 74 EAGIDDNQELLELSVEEDDAESVAEIENEVKQLNTSLEKLEFRRMFSGEMDENNAYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA++LLRMY RW E R FK E E DG+ AGIKSAT+ ++G AYGWL+ Sbjct: 134 AGSGGTEAQDWASILLRMYLRWCESRGFKAEVTEESDGDVAGIKSATIRVEGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++VYP VDDSI+IE++ +D R+DTYRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIDIEVNPADLRVDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+R+THIPTG+VVQCQ +RSQHKN+AQA +M++AKLYELE+QK+ E E + Sbjct: 254 VNKTDSAIRLTHIPTGIVVQCQNDRSQHKNRAQAMSMMKAKLYELEMQKQREEQQALEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT E ++ + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVL-DQSRIKDLRTGHESSNTTAVLDGDLDSFIEASLKA 363 >gi|16130793|ref|NP_417367.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. MG1655] gi|89109670|ref|AP_003450.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. W3110] gi|170082452|ref|YP_001731772.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. DH10B] gi|238902016|ref|YP_002927812.1| peptide chain release factor RF-2 [Escherichia coli BW2952] gi|2507293|sp|P07012|RF2_ECOLI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229576667|sp|B1XEH8|RF2_ECODH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|259585244|sp|C5A0G3|RF2_ECOBW RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|28373696|pdb|1ML5|Z Chain Z, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|2367172|gb|AAC75929.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. MG1655] gi|85675703|dbj|BAE76956.1| peptide chain release factor RF-2 [Escherichia coli str. K12 substr. W3110] gi|169890287|gb|ACB03994.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. DH10B] gi|238861985|gb|ACR63983.1| peptide chain release factor RF-2 [Escherichia coli BW2952] gi|260448063|gb|ACX38485.1| hypothetical protein EcDH1_0801 [Escherichia coli DH1] gi|315137490|dbj|BAJ44649.1| peptide chain release factor RF-2 [Escherichia coli DH1] gi|228558|prf||1806195A peptide chain-releasing factor:ISOTYPE=2 Length = 365 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|50119718|ref|YP_048885.1| peptide chain release factor 2 [Pectobacterium atrosepticum SCRI1043] gi|81646129|sp|Q6D946|RF2_ERWCT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|49610244|emb|CAG73687.1| putative peptide chain release factor 2 [Pectobacterium atrosepticum SCRI1043] Length = 365 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 186/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LAERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD ETS L ++ ++ +F + SGE DS D YL++ Sbjct: 74 AQGLEDVTGLLELAVEEDDEDTFNETSAELDVLENKLGQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E + Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQVMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|261420549|ref|YP_003254231.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61] gi|297531361|ref|YP_003672636.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3] gi|319768218|ref|YP_004133719.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52] gi|261377006|gb|ACX79749.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61] gi|297254613|gb|ADI28059.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3] gi|317113084|gb|ADU95576.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52] Length = 367 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 175/353 (49%), Positives = 238/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L + G D + R+ L + P+ W + A+ ++ E L + + Sbjct: 13 KMAKRLAEIRGSLDLEAKQARIRELEEQMAAPNFWDDQKAAQAVISEVNALKDLVEEFSS 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++R + + EL EE D + E + +++ + + + LL+ D N+A LE+ Sbjct: 73 LEERFDNLEVTYELLKEEPDDELQAELVEEAKKLMKDFSEFELQLLLNEPYDQNNAILEL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+ GEEAGIKS TLLIKG NAYG+L Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D++ RRHTSF S V P +DD+IEIEI + +IDTYR+SGAGGQ Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVVPELDDNIEIEIRPEELKIDTYRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ Sbjct: 253 HVNTTDSAVRITHLPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L K Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 365 >gi|15833017|ref|NP_311790.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. Sakai] gi|26249306|ref|NP_755346.1| peptide chain release factor 2 [Escherichia coli CFT073] gi|30064203|ref|NP_838374.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T] gi|170018863|ref|YP_001723817.1| peptide chain release factor 2 [Escherichia coli ATCC 8739] gi|170682178|ref|YP_001745044.1| peptide chain release factor 2 [Escherichia coli SMS-3-5] gi|215488191|ref|YP_002330622.1| peptide chain release factor 2 [Escherichia coli O127:H6 str. E2348/69] gi|218550138|ref|YP_002383929.1| peptide chain release factor 2 [Escherichia fergusonii ATCC 35469] gi|218559884|ref|YP_002392797.1| peptide chain release factor 2 [Escherichia coli S88] gi|218691016|ref|YP_002399228.1| peptide chain release factor 2 [Escherichia coli ED1a] gi|218696486|ref|YP_002404153.1| peptide chain release factor 2 [Escherichia coli 55989] gi|218701600|ref|YP_002409229.1| peptide chain release factor 2 [Escherichia coli IAI39] gi|218706397|ref|YP_002413916.1| peptide chain release factor 2 [Escherichia coli UMN026] gi|253772268|ref|YP_003035099.1| peptide chain release factor 2 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162803|ref|YP_003045911.1| peptide chain release factor 2 [Escherichia coli B str. REL606] gi|260845559|ref|YP_003223337.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str. 12009] gi|260857014|ref|YP_003230905.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str. 11368] gi|260869568|ref|YP_003235970.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str. 11128] gi|54039052|sp|P66024|RF2_ECO57 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54039053|sp|P66025|RF2_SHIFL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54041596|sp|P66023|RF2_ECOL6 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|189040000|sp|B1ITB1|RF2_ECOLC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739125|sp|B7MM78|RF2_ECO45 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739126|sp|B7NW32|RF2_ECO7I RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739128|sp|B7N7D5|RF2_ECOLU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739129|sp|B1LR73|RF2_ECOSM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739130|sp|B7LPA4|RF2_ESCF3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790914|sp|B7UHU0|RF2_ECO27 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790915|sp|B7LF76|RF2_ECO55 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790916|sp|B7MZI9|RF2_ECO81 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|26109714|gb|AAN81919.1|AE016766_7 Peptide chain release factor 2 [Escherichia coli CFT073] gi|13363235|dbj|BAB37186.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str. Sakai] gi|30042460|gb|AAP18184.1| peptide chain release factor RF-2 [Shigella flexneri 2a str. 2457T] gi|169753791|gb|ACA76490.1| hypothetical protein EcolC_0818 [Escherichia coli ATCC 8739] gi|170519896|gb|ACB18074.1| peptide chain release factor 2 [Escherichia coli SMS-3-5] gi|215266263|emb|CAS10692.1| peptide chain release factor RF-2 [Escherichia coli O127:H6 str. E2348/69] gi|218353218|emb|CAU99134.1| peptide chain release factor RF-2 [Escherichia coli 55989] gi|218357679|emb|CAQ90320.2| peptide chain release factor RF-2 [Escherichia fergusonii ATCC 35469] gi|218366653|emb|CAR04407.2| peptide chain release factor RF-2 [Escherichia coli S88] gi|218371586|emb|CAR19425.2| peptide chain release factor RF-2 [Escherichia coli IAI39] gi|218428580|emb|CAR09507.2| peptide chain release factor RF-2 [Escherichia coli ED1a] gi|218433494|emb|CAR14397.2| peptide chain release factor RF-2 [Escherichia coli UMN026] gi|253323312|gb|ACT27914.1| hypothetical protein ECBD_0846 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974704|gb|ACT40375.1| peptide chain release factor 2 [Escherichia coli B str. REL606] gi|253978870|gb|ACT44540.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)] gi|257755663|dbj|BAI27165.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str. 11368] gi|257760706|dbj|BAI32203.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str. 12009] gi|257765924|dbj|BAI37419.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str. 11128] gi|309703251|emb|CBJ02586.1| peptide chain release factor 2 (RF-2) [Escherichia coli ETEC H10407] gi|313848742|emb|CAQ33203.2| peptide chain release factor RF2 [Escherichia coli BL21(DE3)] gi|323377221|gb|ADX49489.1| Peptide chain release factor 2 [Escherichia coli KO11] Length = 365 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 185/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|197105302|ref|YP_002130679.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1] gi|238690157|sp|B4RCR3|RF2_PHEZH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|196478722|gb|ACG78250.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1] Length = 369 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 212/351 (60%), Positives = 258/351 (73%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S + NC GG+FDW+ A+++L LN + EDP LW + EA+ + RER L + + ++ Sbjct: 10 SSRSNCSGGVFDWEPALRKLDELNARVEDPTLWNDPDEAQAVSRERSRLSAQVEAVHGLE 69 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L ELA EE D + L E L+ IK + E+LLSGEAD NDAY+E+++ Sbjct: 70 RDLADALGYAELADEEGDEASLDEARAQLREIKERAARAELEALLSGEADGNDAYVEINS 129 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA MLLRMYTRWA+ + +E GE+AGIKS TL +KG NAYGWLK Sbjct: 130 GAGGTESNDWAGMLLRMYTRWAQAHGMSVDVIEETAGEQAGIKSVTLQVKGTNAYGWLKT 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD+IEIEI+ +D R DTYRASGAGGQHV Sbjct: 190 EAGVHRLVRISPYDSSARRHTSFASVWVYPVIDDNIEIEINPADVRTDTYRASGAGGQHV 249 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVR+THIPTG+ V CQ +RSQH+N+ QAW MLRA+LYELEL+KRE E K Sbjct: 250 NKTDSAVRLTHIPTGIAVACQTQRSQHQNRDQAWKMLRARLYELELEKREAAQQALEDQK 309 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T+IGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM A LA + Sbjct: 310 TDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAQR 360 >gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus AHT2] gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2] Length = 368 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 177/353 (50%), Positives = 241/353 (68%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L +L L D DN + R+ L ++ P+ W N A + +E+ L + I ++ Sbjct: 15 NLQGRLQTLRSHLDLDNKLLRIQELEHRSAAPNFWDNPEAAAGVQKEQSDLQDTIDNWQQ 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D D +LLELA+ E+D QE S L ++ + + E + +GE D+++A L + Sbjct: 75 VIDSFEDAEVLLELAIAENDHETEQEVSRALNSVEQRLAAMELECMFNGEHDASNAMLTI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW ++LLRMY RWAEK+ F TE L+ G+EAG KS T+L+KG AYG+L Sbjct: 135 HAGAGGTEAQDWTDILLRMYLRWAEKKGFSTEILDHLPGDEAGTKSVTVLVKGRWAYGYL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E G+HRLVRISP+D+ RRHTSF+S++++P +DD+IE+EI++ D RIDTYRASGAGGQ Sbjct: 195 RSEMGIHRLVRISPFDTGGRRHTSFASVFIFPELDDNIEVEINDKDLRIDTYRASGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SA+RITH+P+G+VVQCQ ERSQH+NK A ML+A+LYE E R+E Sbjct: 255 HVNKTSSAIRITHLPSGIVVQCQNERSQHRNKDTAMKMLKAQLYERERANRKEEQQHLHG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYVLQPY++VKD RTN E + +VLDGDLD F+ + L + Sbjct: 315 DKKEIAWGSQIRSYVLQPYRLVKDHRTNHETGNVDNVLDGDLDPFIISYLLWQ 367 >gi|226328243|ref|ZP_03803761.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198] gi|225202976|gb|EEG85330.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198] Length = 347 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 186/343 (54%), Positives = 240/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ L D Sbjct: 4 GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLDQGLEDVS 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E DD E L + ++E +F + SGE DS D YL++ AG+GGTE+ Sbjct: 64 GLLELAVEADDEETFNEAIAELDVLNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML+RMY RWAE R FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRL Sbjct: 124 QDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS ++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 184 VRKSPFDSGGRRHTSFSSAFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E +K++IGWG Sbjct: 244 RITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 QIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 345 >gi|253687049|ref|YP_003016239.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259585229|sp|C6D8Z5|RF2_PECCP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|251753627|gb|ACT11703.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 365 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD +T+ L ++ ++ +F + SG+ DS D YL++ Sbjct: 74 TQGLEDVAGLLELAVEEDDEDTFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PTG+V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHMPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|257453984|ref|ZP_05619260.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60] gi|257448649|gb|EEV23616.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60] Length = 349 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 178/346 (51%), Positives = 241/346 (69%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD + +RL +N + E+P LW + A + +E+ LDN I I + D+L Sbjct: 3 TSFGGIFDIEAKQERLEEVNLELENPELWNDPERATKISKEKSQLDNVIGVITALDDKLE 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D +++LA+E DD ++L + L + +V +F+ + SGE D N+ Y+++ +G+GG Sbjct: 63 DAKAMIDLAVEADDATLLADVQAELDEAEAKVADLEFKRMFSGEMDGNNCYVDIQSGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA MLLRMY RW E FK E +E+ G AGIKSA++ +KG A+GWL+ E GV Sbjct: 123 TEAQDWAEMLLRMYLRWCESHGFKAEIMELSAGGVAGIKSASIHVKGDYAFGWLRTEIGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH PTG+VV CQ ERSQH NK A MLRAKLYE E+ +R E E +K++IG Sbjct: 243 SAVRITHQPTGIVVACQNERSQHANKDTAMKMLRAKLYEREMMQRMEKQQALEETKSDIG 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 303 WGSQIRSYVLDDS-RIKDLRTGVETSNTQAVLDGDLDKFIEASLKA 347 >gi|28373662|pdb|1MI6|A Chain A, Docking Of The Modified Rf2 X-Ray Structure Into The Low Resolution Cryo-Em Map Of Rf2 E.Coli 70s Ribosome Length = 365 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYE+E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|220934633|ref|YP_002513532.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7] gi|219995943|gb|ACL72545.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7] Length = 364 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 186/350 (53%), Positives = 248/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L G D+D +RL ++ + EDP++W N +A+ L RER L+ + I + Sbjct: 13 LQGRVDALRGYLDYDAKRERLEEVSRELEDPNVWNNPEKAQELGRERSRLEEVVLLISRM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL++A EEDD + +L + +V +F + SGE D N+AY+++ Sbjct: 73 DKALGDTRDLLDMAAEEDDAETVSAVEADLANYENDVAQLEFRRMFSGEMDENNAYMDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWANMLLRMY RW E+R FKTE +E+ +GE AGIKSAT+ +GP AYGWL+ Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWGERRGFKTELMEVSEGEVAGIKSATIKFEGPYAYGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF++++V P VDDSIEIEI+ +D R+DTYRASGAGGQH Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFAAVFVSPEVDDSIEIEINPADLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH+P+GVVV CQ +RSQHKN+ A L+AKLYELELQK+ E + Sbjct: 253 VNRTESAIRITHMPSGVVVACQADRSQHKNRDTAMKQLKAKLYELELQKQNAAKQALEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 KSDIGWGSQIRSYVL-DQSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLK 361 >gi|255659162|ref|ZP_05404571.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544] gi|260848613|gb|EEX68620.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544] Length = 368 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 240/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L+ +G + ++++ L K +P W + +A+ + +E + ++ K Sbjct: 11 ELKTKLDQMGESLEVPAKEEKIAELEYKMGEPTFWDDAEKAQKINQELNDVKISVDKYKN 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L E+ +EE D S+ ++ L + +E Q E LLSG D+N+A L + Sbjct: 71 LVAKFEDAQTLWEMGMEEQDESMEEDVKSELAAVAEGLESLQLEVLLSGPYDANNAILTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSATL IKG NAYG+L Sbjct: 131 HAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLLPGDEAGVKSATLFIKGHNAYGFL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G+HRLVRISP+D+ +RRHTSF++ + P +DD++E+ I+ SD R+DTYRASGAGGQ Sbjct: 191 RSEKGIHRLVRISPFDAQARRHTSFAACDIMPEIDDNVEVNINMSDVRVDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q MLRAKL+ELE++K+E E Sbjct: 251 HINKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCLKMLRAKLFELEMEKKEAELAKLEG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD RTN+E + V+DGD+D F++A LA K Sbjct: 311 DQQKIEWGSQIRSYVFQPYTMVKDHRTNVETGNVQAVMDGDIDMFIRAFLAAK 363 >gi|220925876|ref|YP_002501178.1| hypothetical protein Mnod_6050 [Methylobacterium nodulans ORS 2060] gi|219950483|gb|ACL60875.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 375 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 229/351 (65%), Positives = 279/351 (79%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + L DWD A +RL+ LN ++EDP LW + A+ +MRER L+ A+S I+ ++ Sbjct: 13 KQSIGLLRRHLDWDTADKRLAELNARSEDPALWNDPEAAQKVMRERTQLEEAVSAIRRLE 72 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L+EL E D + ++E + ++ ++ E +Q E+LL+GEAD ND YLEVHA Sbjct: 73 QGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIETLLAGEADGNDTYLEVHA 132 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDWANML RMY RWAE+RK+K E +E +GEEAGIK ATLLIKG NAYGWLK Sbjct: 133 GAGGTESQDWANMLHRMYARWAERRKYKVEIVEWSEGEEAGIKGATLLIKGHNAYGWLKT 192 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD I IE+ ESDCRIDTYR+SGAGGQHV Sbjct: 193 ESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRITIEVKESDCRIDTYRSSGAGGQHV 252 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITHIPTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE AN +SK Sbjct: 253 NTTDSAVRITHIPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKANAEAASK 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T+IGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG++D F++A+LA + Sbjct: 313 TDIGWGHQIRSYVLQPYQLVKDLRTGAQSTSPGDVLDGEIDPFIEASLAQR 363 >gi|209519985|ref|ZP_03268764.1| peptide chain release factor 2 [Burkholderia sp. H160] gi|209499582|gb|EDZ99658.1| peptide chain release factor 2 [Burkholderia sp. H160] Length = 384 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 177/345 (51%), Positives = 247/345 (71%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D+ RL +N + EDP +W + A+ L +E++ LD+ + + I + + Sbjct: 38 TTYGGIFDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSITNDVN 97 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L E+A EE D L + Q I+ V +F + + AD N+A+L++ AGAGG Sbjct: 98 DAQDLFEMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQAGAGG 157 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FKTE LE +G+ AGIK+AT+ I+G AYG+L+ E GV Sbjct: 158 TEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLRTETGV 217 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD Sbjct: 218 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 277 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ KT++G Sbjct: 278 SAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVG 337 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 338 WGHQIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 381 >gi|187924547|ref|YP_001896189.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN] gi|187715741|gb|ACD16965.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN] Length = 417 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 180/345 (52%), Positives = 249/345 (72%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D+ RL +N + EDP +W + A+ L RE++ LD+ + + + + L Sbjct: 71 TRYGGIFDYDDKALRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLR 130 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ++A EEDD L + Q I+ V +F + + AD N+A+L++ AGAGG Sbjct: 131 DAQDLFDMAREEDDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGG 190 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GV Sbjct: 191 TEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGV 250 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TD Sbjct: 251 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTD 310 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIP+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+E + E+ KT++G Sbjct: 311 SAVRITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVG 370 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 371 WGHQIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 414 >gi|312959346|ref|ZP_07773863.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6] gi|311286063|gb|EFQ64627.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6] Length = 430 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 184/345 (53%), Positives = 242/345 (70%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +RL+ +N + EDP +W A+ L RER L + + E+ L Sbjct: 84 KLFGGIFDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDELNTGLA 143 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D LL++A+EEDD + + L R++ + +F + S E D N+AYL++ AG+GG Sbjct: 144 DCRDLLDMAVEEDDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGG 203 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ E GV Sbjct: 204 TEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGV 263 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 264 HRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 323 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT VV CQ ERSQH NK A MLRAKLYE E+QKR + E +K++IG Sbjct: 324 SAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIG 383 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTNIE++ VLDGD+D++++A+L Sbjct: 384 WGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 427 >gi|311278189|ref|YP_003940420.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1] gi|308747384|gb|ADO47136.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1] Length = 365 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 185/351 (52%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLNQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 AQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AG+KSAT+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGLKSATIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIP+G+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPSGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|254555779|ref|YP_003062196.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1] gi|300767562|ref|ZP_07077472.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179754|ref|YP_003923882.1| peptide chain release factor 2 [Lactobacillus plantarum subsp. plantarum ST-III] gi|254044706|gb|ACT61499.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1] gi|300494547|gb|EFK29705.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045245|gb|ADN97788.1| peptide chain release factor 2 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 357 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 170/347 (48%), Positives = 220/347 (63%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG FD D + + + +P W + A+ ++ E L K++ D + Sbjct: 4 TTLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVG 63 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D + EL EE D + E + Q + +++ + LL G D N+A LE+H GAGG Sbjct: 64 DLAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDW MLLRMYTRWA FK E ++ G+EAGIKS TLLI G NAYG+L+ E+GV Sbjct: 124 TESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D+ RRHTSF+S+ V P +DD+++++I D +ID YRASGAGGQHVN T Sbjct: 184 HRLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTS 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV Q +RSQ +N+ A NMLRAKLYE E +K+ + + + +IG Sbjct: 244 SAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIG 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RTN E V+DGDLD FM A L K Sbjct: 304 WGSQIRSYVFHPYTMVKDHRTNYESHDGQAVMDGDLDPFMDAYLQWK 350 >gi|330839015|ref|YP_004413595.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] gi|329746779|gb|AEC00136.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] Length = 368 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 180/352 (51%), Positives = 239/352 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +L +G D ++++ L K +P W N EA+ + +E + ++ KEI Sbjct: 12 MQAKLKEMGDSLDVARKEEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKGSVDKYKEI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LLE+ALEE+D S+ E + IK V + E LLSG D+N+A L +H Sbjct: 72 VSKTDDAQALLEMALEENDTSLEPEVQTEFETIKTAVRELELEVLLSGPYDANNAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F ++ G+EAG+KSATL I G NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFSVVTADLLPGDEAGVKSATLFINGHNAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DSN+RRHTSFS+ + P +DD++E+ I+ +D R+DTYRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSNARRHTSFSACDIMPEIDDAVEVAINMADVRVDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q MLRAKL+ELE +K+E E Sbjct: 252 INKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RT +E + V+DGDLD F++A LA K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDMRTGMETGNVQAVMDGDLDAFIEAFLAAK 363 >gi|227513676|ref|ZP_03943725.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577] gi|227524821|ref|ZP_03954870.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290] gi|227083087|gb|EEI18399.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577] gi|227088036|gb|EEI23348.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290] Length = 354 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 172/346 (49%), Positives = 225/346 (65%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD+D + +S K +P W + A+ ++ E L + L D Sbjct: 2 ALGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKMIDETNQLKTKRDRFNTLTKELDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LEL E+ D + E ++K +++ Q LL+G+ D N+A LE+H GAGGT Sbjct: 62 LKVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +MLLRMYTRWAE FK + L+ GE AGI S ++LI G NAYG+L+ E+GVH Sbjct: 122 EAQDWGSMLLRMYTRWAESHNFKVDVLDYQVGEVAGINSVSILISGENAYGYLRSEKGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS RRHTSF+S+ V P +DD + I+IS + ++D YRASGAGGQHVN T S Sbjct: 182 RLVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTG+VV Q +RSQ +N+ A NML++KLYELE QK+ E E + +IGW Sbjct: 242 AVRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYV PY MVKD RTN E + + V+DGDLD F+ A L + Sbjct: 302 GSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 347 >gi|887841|gb|AAA83072.1| peptide chain release factor 2 (RF-2) [Escherichia coli] Length = 365 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 182/351 (51%), Positives = 235/351 (66%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH Sbjct: 194 TETGVHRXVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK Q ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQXMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|261820184|ref|YP_003258290.1| peptide chain release factor 2 [Pectobacterium wasabiae WPP163] gi|261604197|gb|ACX86683.1| hypothetical protein Pecwa_0864 [Pectobacterium wasabiae WPP163] Length = 365 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 186/351 (52%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEVIVDTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD ETS L ++ ++ +F + SG+ DS D YL++ Sbjct: 74 AQGLEDVAGLLELAVEEDDEDTFNETSLELDVLENKLGQLEFRRMFSGQYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|16080582|ref|NP_391409.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. 168] gi|6174964|sp|P28367|RF2_BACSU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|2331287|gb|AAC97534.1| release factor 2 [Bacillus subtilis] gi|2618874|gb|AAC67303.1| putative peptide chain release factor RF-2 [Bacillus subtilis] gi|2636055|emb|CAB15546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. 168] Length = 366 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 173/353 (49%), Positives = 232/353 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ +L G D ++ R++ L+ + DP W + +A+ ++ E L + ++ K+ Sbjct: 12 NMASRLADFRGSLDLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDYVNSYKK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + + +L EE D + E L+ + E + + LLS D N+A LE+ Sbjct: 72 LNESHEELQMTHDLLKEEPDTDLQLELEKELKSLTKEFNEFELQLLLSEPYDKNNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRW E+R FK E L+ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWGERRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D I+I+I D ++DTYRASGAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PT VVV CQ ERSQ KN+ +A ML+AKLY+ +++++ + Sbjct: 252 HVNTTDSAVRITHLPTNVVVTCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY MVKD RTN E + V+DGD+D F+ A L K Sbjct: 312 EQKEIGWGSQIRSYVFHPYSMVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSK 364 >gi|323340175|ref|ZP_08080439.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644] gi|323092366|gb|EFZ34974.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644] Length = 358 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 167/348 (47%), Positives = 234/348 (67%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 + LGGLFD D + ++ +K DP W N EA+ ++ E L N ++++ Sbjct: 3 RSRTLGGLFDLDGLQEAIADNESKMADPDFWNNQEEAQKVINENNELKNKYDNFNQLEEA 62 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D +LLE+ E+DD ++ E S+ + + +++ Q LL+G+ D ++A LE+H GA Sbjct: 63 IEDLEVLLEMVQEDDDDELVSELSEKFELAQKKMQEYQLSLLLNGKYDKDNAILELHPGA 122 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTESQDW +MLLRMYTRWAE+ F E + G+EAGIKS TL I G NAYG+L+ E+ Sbjct: 123 GGTESQDWGSMLLRMYTRWAEQHGFSVETDDYQAGDEAGIKSVTLTISGHNAYGYLRSEK 182 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DS RRHTSF S+ V P +DD +E+++ D +++ +R+SGAGGQH+N Sbjct: 183 GVHRLVRISPFDSAGRRHTSFCSVNVMPELDDDVEVDLRPEDIKMEVFRSSGAGGQHINK 242 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+ HIPTG+VV Q +RSQ +N+A A MLR+KLY++EL+++E+ + + + Sbjct: 243 TSSAVRLIHIPTGIVVSSQAQRSQFQNRATAEKMLRSKLYQMELEEQEKKRAAIQGEQLD 302 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IGWG QIRSYV PY MVKD RTN E + S V+DGDLD F+ A L Sbjct: 303 IGWGSQIRSYVFHPYSMVKDHRTNYETGNISSVMDGDLDGFINAYLQW 350 >gi|227510661|ref|ZP_03940710.1| peptide chain release factor 2 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190313|gb|EEI70380.1| peptide chain release factor 2 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 354 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 173/346 (50%), Positives = 226/346 (65%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD+D + +S K +P W + A+ L+ E L + + L D Sbjct: 2 ALGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKLIDETNQLKTKRDRFDTLTNELDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LEL E+ D + E ++K +++ Q LL+G+ D N+A LE+H GAGGT Sbjct: 62 LKVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +MLLRMYTRWAE FK + L+ GE AGI S ++LI G NAYG+L+ E+GVH Sbjct: 122 EAQDWGSMLLRMYTRWAETHDFKVDVLDYQVGEVAGINSVSILINGENAYGYLRSEKGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS RRHTSF+S+ V P +DD + I+IS + ++D YRASGAGGQHVN T S Sbjct: 182 RLVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTG+VV Q +RSQ +N+ A NML++KLYELE QK+ E E + +IGW Sbjct: 242 AVRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYV PY MVKD RTN E + + V+DGDLD F+ A L + Sbjct: 302 GSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 347 >gi|15803427|ref|NP_289460.1| peptide chain release factor 2 [Escherichia coli O157:H7 EDL933] gi|12517417|gb|AAG58019.1|AE005519_5 peptide chain release factor RF-2 [Escherichia coli O157:H7 str. EDL933] Length = 365 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTS SS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSXSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|229916623|ref|YP_002885269.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b] gi|259585245|sp|C4L5K9|RF2_EXISA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229468052|gb|ACQ69824.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b] Length = 366 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 175/350 (50%), Positives = 234/350 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++L + R++ L + P W N +A+ ++ E L + +++ Sbjct: 13 MAKRLENYRASLNLTEKEARIAELENEMTYPDFWDNQEKAQKVIDESNGLKAMVDKYQDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D + LEL EE D + +E +++Q +K E + + E LL+G D+N+A LE+H Sbjct: 73 ANQHEDGEVTLELIKEEPDAEMQEELGESIQALKKEFDDFELEILLNGPYDANNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMY R+A+K+ +K E ++ GEEAG+KS TL I G NAYG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYQRFADKQGWKVETVDYLPGEEAGVKSVTLRIVGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+G+HRLVRISP+DS+ RRHTSF S V P DD IEIE+ D RIDTYRASGAGGQH Sbjct: 193 AEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFDDDIEIEVRTEDLRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+PTGVVV CQ ERSQ KN+ A ML+AKLY+ EL +++ + Sbjct: 253 INTTDSAVRITHVPTGVVVSCQTERSQIKNRESAMKMLKAKLYQRELDEQQRKLDEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT+IGWG QIRSYV PY MVKD RTN E + S V+DGD+ F+ A L Sbjct: 313 KTDIGWGSQIRSYVFHPYSMVKDHRTNYEVGNTSGVMDGDVMPFIDAYLR 362 >gi|28377601|ref|NP_784493.1| peptide chain release factor 2 [Lactobacillus plantarum WCFS1] gi|38258340|sp|Q88YL5|RF2_LACPL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|28270434|emb|CAD63336.1| peptide chain release factor 2, C-terminal fragment [Lactobacillus plantarum WCFS1] Length = 357 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 170/347 (48%), Positives = 220/347 (63%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG FD D + + + +P W + A+ ++ E L K++ D + Sbjct: 4 TTLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVG 63 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D + EL EE D + E + Q + +++ + LL G D N+A LE+H GAGG Sbjct: 64 DLAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDW MLLRMYTRWA FK E ++ G+EAGIKS TLLI G NAYG+L+ E+GV Sbjct: 124 TESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D+ RRHTSF+S+ V P +DD+++++I D +ID YRASGAGGQHVN T Sbjct: 184 HRLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTS 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV Q +RSQ +N+ A NMLRAKLYE E +K+ + + + +IG Sbjct: 244 SAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIG 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RTN E V+DGDLD FM A L K Sbjct: 304 WGSQIRSYVFHPYTMVKDHRTNYESHHGQAVMDGDLDPFMDAYLQWK 350 >gi|157162351|ref|YP_001459669.1| peptide chain release factor 2 [Escherichia coli HS] gi|166977373|sp|A8A432|RF2_ECOHS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157068031|gb|ABV07286.1| peptide chain release factor 2 [Escherichia coli HS] Length = 365 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G +D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLCYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32] gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32] Length = 370 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 169/350 (48%), Positives = 243/350 (69%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++N L G D D+ + + L ++ P W + A+ +++ER ++ ++ + Sbjct: 12 MAERINNLRGSLDIDSLREDIQELESRIAAPGFWDDNEAAQKVLKERTVMEKTLASWDRL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D +L+EL E +D + L E D +++ + +F+ +LSG D++ + ++ Sbjct: 72 NRQVEDIRVLIELGSEAEDEATLAEVHDLNDQLEKGLVDAEFQKMLSGPHDASSCFFSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA MLLRMY R+ E++ +KTE + G+EAG+K T + G AYG+LK Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQSGDEAGVKGVTFSVSGEYAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D I+++I E+D R+DT+R+SGAGGQH Sbjct: 192 AEVGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIDVKIVETDLRVDTFRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSA+RITHIPTG+VV CQ ERSQH N+A A +LRAKLYE ELQ+RE A Sbjct: 252 VNTTDSAIRITHIPTGIVVACQTERSQHMNRATAMRVLRAKLYERELQERESQAAEIAGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG+L+ F+ A L Sbjct: 312 KKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGELEQFIIAFLM 361 >gi|224824516|ref|ZP_03697623.1| peptide chain release factor 2 [Lutiella nitroferrum 2002] gi|224603009|gb|EEG09185.1| peptide chain release factor 2 [Lutiella nitroferrum 2002] Length = 349 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 181/343 (52%), Positives = 239/343 (69%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL + TEDP +W + A+ L RER+ L++ + I I + D+ Sbjct: 5 FGGIFDYDGKCDRLEEVVRLTEDPDVWNDPKRAQDLGRERKQLEDVVLVIDRISGAVNDS 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L ++A EE+D + D+L + ++ +F + D N+ +L++ AGAGGTE Sbjct: 65 RDLFDMAREENDADTILAVQDDLAEAEAKLAQLEFRRMFHDPMDPNNCFLDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMYTR+AE++ F+ E LE +GE AGI SATL I G AYG L+ E GVHR Sbjct: 125 AQDWAGMLLRMYTRYAERKGFRVEILEESEGEVAGITSATLKISGEYAYGLLRTEVGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR+SP+DSN+RRHTSFSS++VYP VDDS IEI+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 185 LVRVSPFDSNARRHTSFSSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH PTG+VVQCQ +RSQH+N+ +A MLRAKLYELEL+KR E E +KT++GWG Sbjct: 245 VRITHNPTGIVVQCQNDRSQHRNRDEAMQMLRAKLYELELKKRNEAKQALEDTKTDVGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV +KDLRT+ E + V+DGDLD F++ +L Sbjct: 305 HQIRSYVF-DQSRIKDLRTSYEVGNIKSVMDGDLDGFIEESLK 346 >gi|292900474|ref|YP_003539843.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946] gi|291200322|emb|CBJ47450.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946] Length = 365 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 183/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSTVLRGYLDYDAKKERLQEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E +D E L + ++ +F + SGE DS D Y+++ Sbjct: 74 TQGLEDVSGLLELAVEAEDEDTFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ E + Sbjct: 254 VNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 363 >gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782] gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782] Length = 373 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 172/353 (48%), Positives = 237/353 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + D + ++ L K +P W ++ ++ ++++ + L I I Sbjct: 14 LKSNLEEMRASLDIASISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIDRFNNI 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L EL LEE D S++ E + LQ +K +E + E+LL+G D N+A L +H Sbjct: 74 TSQWEDLFTLSELGLEEQDESVIPEVGEGLQLLKHNLEALRLETLLTGPYDKNNAILTLH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRM+TRW E + ++ + L+ DG+EAGIKS T+ + G NAYG+LK Sbjct: 134 AGAGGTEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S V P +DD+IEI I+ D R+DTYRASGAGGQH Sbjct: 194 SEKGVHRLVRISPFDSSGRRHTSFASADVMPELDDTIEININPDDLRVDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSA+RITHIPTGVVV CQ ERSQ +NK A ML+AKL+EL+ ++++E + Sbjct: 254 INKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + EI WG QIRSYV PY +VKD RTN E+ + V+DG+LD F+ A L+++K Sbjct: 314 QMEIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLSMEK 366 >gi|220929619|ref|YP_002506528.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10] gi|219999947|gb|ACL76548.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10] Length = 373 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 236/353 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + D ++ L K +P W ++ ++ ++++ + L I I Sbjct: 14 LKSNLEEMRASLDIARISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNI 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L EL LEE D S++ E + L ++K +E + E+LL+G D N+A L +H Sbjct: 74 TSQWEDLFTLAELGLEEQDESVIPEVGEGLVQLKNNLESLRLETLLTGPYDKNNAILTLH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRM+TRW E + ++ + L+ DG+EAGIKS T+ + G NAYG+LK Sbjct: 134 AGAGGTEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S+ V P +DD+IEI I+ D RIDTYRASGAGGQH Sbjct: 194 SEKGVHRLVRISPFDSSGRRHTSFASLDVMPELDDTIEININPDDLRIDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSA+RITHIPTGVVV CQ ERSQ +NK A ML+AKL+EL+ ++++E + Sbjct: 254 INKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + +I WG QIRSYV PY +VKD RTN E+ + V+DG+LD F+ A L++ K Sbjct: 314 QMDIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLSVGK 366 >gi|206578228|ref|YP_002236652.1| peptide chain release factor 2 [Klebsiella pneumoniae 342] gi|288933629|ref|YP_003437688.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22] gi|238054482|sp|B5XUF3|RF2_KLEP3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|206567286|gb|ACI09062.1| peptide chain release factor 2 [Klebsiella pneumoniae 342] gi|288888358|gb|ADC56676.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22] Length = 365 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E +D E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 SQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|317405230|gb|EFV85568.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54] Length = 386 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 173/344 (50%), Positives = 246/344 (71%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG+FD+D +RL +N + EDP +W + A+ L RE++ L++ + + + L D Sbjct: 41 LYGGIFDYDAKAERLQVVNAELEDPAVWNDPKHAQDLGREKKALEDVVETLTGLGTGLAD 100 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + L ELA ++D + L+ + + ++E +F + S AD + +L++ AGAGGT Sbjct: 101 SNELFELAAADNDDATLESIELDANGFQEKLESLEFRRMFSNPADPLNCFLDIQAGAGGT 160 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA+MLLR Y ++AE++ FK E LE +GE AGIKSAT+ ++G A+G+L+ E GVH Sbjct: 161 EAQDWASMLLRQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGEYAFGYLRTETGVH 220 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS+ RHTSF+S++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TDS Sbjct: 221 RLVRKSPFDSSGGRHTSFASVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDS 280 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+THIPTG+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SKT++GW Sbjct: 281 AVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGW 340 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 341 GHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 383 >gi|116494437|ref|YP_806171.1| protein chain release factor B [Lactobacillus casei ATCC 334] gi|227535599|ref|ZP_03965648.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631186|ref|ZP_04674217.1| peptide chain release factor 2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065947|ref|YP_003787970.1| protein chain release factor B [Lactobacillus casei str. Zhang] gi|116104587|gb|ABJ69729.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus casei ATCC 334] gi|227186729|gb|EEI66796.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239525651|gb|EEQ64652.1| peptide chain release factor 2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438354|gb|ADK18120.1| Protein chain release factor B [Lactobacillus casei str. Zhang] gi|327381888|gb|AEA53364.1| Peptide chain release factor 2 [Lactobacillus casei LC2W] gi|327385049|gb|AEA56523.1| Peptide chain release factor 2 [Lactobacillus casei BD-II] Length = 368 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 155/349 (44%), Positives = 223/349 (63%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +L LGG FD D +R++ + +P W + A+ ++ L +++ Sbjct: 13 KLINLGGHFDLDALNERITENEGRMAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENE 72 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D EL +E D + QE ++ ++ +++ + + LL+G D N+A LE+H GA Sbjct: 73 LEDLEAGFELLQDEPDKDLQQEEEAKIKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGA 132 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTESQDW +ML+RMY RWA++ FK E + G+EAGIKS TLLI G NAYG LK E+ Sbjct: 133 GGTESQDWGSMLMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEK 192 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DS RRHTSF+S+ V P +D+SIE+++ D +++ +R+SGAGGQH+N Sbjct: 193 GVHRLVRISPFDSAGRRHTSFASVDVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINK 252 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+ H+PTG+V Q +RSQ +NKA A ML+AKLY+ E + + A + + + Sbjct: 253 TSSAVRLIHLPTGIVTSSQAQRSQFQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKD 312 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +G QIRSYV PY MVKD RTN E + + V+DGDL+ F+ A L + Sbjct: 313 VAFGSQIRSYVFHPYTMVKDHRTNYETGNGNAVMDGDLNPFINAYLQWE 361 >gi|123443573|ref|YP_001007546.1| peptide chain release factor 2 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166225120|sp|A1JPL5|RF2_YERE8 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|122090534|emb|CAL13403.1| peptide chain release factor 2 [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 365 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ ++ I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEEIVTTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LLELA+E DD E L + ++ +F + SGE DS + YL++ Sbjct: 74 DQGMDDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E + Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|317049377|ref|YP_004117025.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b] gi|316950994|gb|ADU70469.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b] Length = 365 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 182/351 (51%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEIIVGTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD ET L ++ ++ +F + SGE DS D Y+++ Sbjct: 74 YQGLEDVQGLLELAVEADDEETFNETIAELDGLETKLGELEFRRMFSGEYDSADCYIDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E +GE AG+KSAT+ + G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIRVSGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAAEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 363 >gi|295697362|ref|YP_003590600.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912] gi|295412964|gb|ADG07456.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912] Length = 382 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 170/352 (48%), Positives = 235/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ +G D ++++ + + W + A+ ++ E L + + ++ + Sbjct: 15 LVERLDEIGRSLDLAGKKKQIAGMEQRMAAADFWDDQEGAQKVIAEVNRLKDVVERVEGL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L EL EE D ++L E + ++ ++ + E +LSG D N+A +E+H Sbjct: 75 RSRVEDLEVLWELGHEEGDETVLGEIEAGITQVHSQLGQFELELMLSGPYDRNNAIVELH 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDW MLLRMYTRWAE R +K E L+ GEEAG+KS TLLIKG NAYG+LK Sbjct: 135 PGAGGTESQDWTAMLLRMYTRWAESRGYKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLK 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D++ RRHTSF+S+ V P +D+S++++I D +IDTYR+SGAGGQH Sbjct: 195 AERGVHRLVRISPFDASGRRHTSFASVDVLPELDESVDVDIRPEDLKIDTYRSSGAGGQH 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ KN+A A +L A+LYE +++EE Sbjct: 255 VNTTDSAVRITHIPTGIVVTCQSERSQIKNRATAMKILAARLYERRRREQEEQIAALRGE 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIRSYV PY MVKD RT +E + V+DGD+D F+ A L + Sbjct: 315 QKEIAWGSQIRSYVFHPYSMVKDHRTGVETGNVQAVMDGDIDAFIDAWLRQR 366 >gi|283788451|ref|YP_003368316.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium ICC168] gi|282951905|emb|CBG91623.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium ICC168] Length = 365 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 185/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 AQGLEDVSGLLELAVEADDEETFNEAVAELDMLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|260587039|ref|ZP_05852952.1| peptide chain release factor 2 [Blautia hansenii DSM 20583] gi|331082810|ref|ZP_08331932.1| peptide chain release factor 2 [Lachnospiraceae bacterium 6_1_63FAA] gi|260542529|gb|EEX23098.1| peptide chain release factor 2 [Blautia hansenii DSM 20583] gi|330400139|gb|EGG79788.1| peptide chain release factor 2 [Lachnospiraceae bacterium 6_1_63FAA] Length = 372 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 163/350 (46%), Positives = 237/350 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + L + D +N +R+ L + E P W N ++ +M+E L + ++Q Sbjct: 15 TEPLKEVRDSLDLENKEKRVEELEREMEAPGFWDNAERSQKMMKELSALKGDMEIYHKLQ 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 ++ + +++E+ EE+D SI+ + + L + E+ + ++LLSGE D ++A + +HA Sbjct: 75 NQKEEIELMIEMGYEENDPSIVPDIQEMLDEFIQDFEHIRIKTLLSGEYDKDNAIVTLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA+ML RMY RWA+++ F TE L+ DG+EAGIKS T + G NAYG+LK Sbjct: 135 GAGGTESCDWASMLYRMYLRWADRQGFSTEVLDYLDGDEAGIKSVTFQVNGENAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++ +R TSF S V P +++ +++EI+ D RIDTYR+SGAGGQH+ Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFVSCDVMPDIEEDVDVEINPDDLRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITH+PTG+VVQCQ ERSQ +NK +A ML+AKLY L+ Q+ E+ + + Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYLLKQQENEKKLSGIQGEL 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 TEIGWG QIRSYV+QPY MVKD RTN E + V++G++D+F+ A L Sbjct: 315 TEIGWGNQIRSYVMQPYTMVKDHRTNEETGNVDAVMNGNIDNFINAYLKW 364 >gi|322831509|ref|YP_004211536.1| Peptide chain release factor 2 [Rahnella sp. Y9602] gi|321166710|gb|ADW72409.1| Peptide chain release factor 2 [Rahnella sp. Y9602] Length = 365 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 188/351 (53%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I E+ Sbjct: 14 LSERTVVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDEL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D LLELA+E DD ET L + ++E +F + SGE DS YL++ Sbjct: 74 LQGAEDVTGLLELAVEADDEDTFNETVAELDVLTAKLEQLEFRRMFSGEYDSASCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGEVAGLKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD IEIEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIEIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +V QCQ +RSQHKNK QA +RAKLYE E+QK+ E + Sbjct: 254 VNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQMRAKLYEYEMQKKNADKQQLEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|254191408|ref|ZP_04897912.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur 52237] gi|157939080|gb|EDO94750.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur 52237] Length = 367 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 180/350 (51%), Positives = 251/350 (71%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G D+D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 364 >gi|150260100|ref|ZP_01916828.1| peptide chain release factor 2 [Yersinia pestis CA88-4125] gi|153948098|ref|YP_001399866.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP 31758] gi|218928062|ref|YP_002345937.1| peptide chain release factor 2 [Yersinia pestis CO92] gi|229837575|ref|ZP_04457737.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A] gi|229840798|ref|ZP_04460957.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842643|ref|ZP_04462798.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. India 195] gi|229903704|ref|ZP_04518817.1| Peptide chain release factor 2 [Yersinia pestis Nepal516] gi|257168082|ref|NP_670572.2| peptide chain release factor 2 [Yersinia pestis KIM 10] gi|166977375|sp|A7FF38|RF2_YERP3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|149289508|gb|EDM39585.1| peptide chain release factor 2 [Yersinia pestis CA88-4125] gi|152959593|gb|ABS47054.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP 31758] gi|229679474|gb|EEO75577.1| Peptide chain release factor 2 [Yersinia pestis Nepal516] gi|229690953|gb|EEO83007.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. India 195] gi|229697164|gb|EEO87211.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704263|gb|EEO91274.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A] gi|320014035|gb|ADV97606.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 365 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 186/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ ++ I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD ET L+ + ++ +F + SGE D + YL++ Sbjct: 74 EQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E + Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|312115773|ref|YP_004013369.1| peptide chain release factor 2 [Rhodomicrobium vannielii ATCC 17100] gi|311220902|gb|ADP72270.1| Peptide chain release factor 2 [Rhodomicrobium vannielii ATCC 17100] Length = 376 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 225/353 (63%), Positives = 278/353 (78%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L+ L DWD A RL+ LN EDP LW N A+ L+RERQHLD A++ + Sbjct: 11 EIKQSLSLLRRYLDWDKAKIRLANLNEIVEDPTLWDNPQRAQKLLRERQHLDTALTAYSQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + RL D + L+EL EE D +++E +L ++ EV+ ++ E+LLSGEAD ND +LEV Sbjct: 71 LAARLDDAVGLIELGEEESDEEVVKEAEASLAVLQTEVQKREVEALLSGEADGNDTFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDW MLLRMY RWAE++ +K E +E GEEAG+KSAT+ +KG NA+GWL Sbjct: 131 HAGAGGTESQDWTEMLLRMYMRWAEEQGYKVELIESAAGEEAGLKSATIQVKGSNAFGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I+I ++ESDCRIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDTIDIAVNESDCRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VVQCQ ERSQHKN+A AWNML+A+LYE EL+KRE+ A+ + Sbjct: 251 HVNTTDSAVRITHVPTGIVVQCQMERSQHKNRATAWNMLKARLYEQELKKREDAAHAAAA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SKT+IGWG QIRSYVLQPYQMVKDLRT I T+P VLDGDL F++A LA + Sbjct: 311 SKTDIGWGHQIRSYVLQPYQMVKDLRTGIVNTNPPAVLDGDLTAFIEAALAQR 363 >gi|53719890|ref|YP_108876.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243] gi|53723794|ref|YP_103319.1| peptide chain release factor 2 [Burkholderia mallei ATCC 23344] gi|226830773|ref|YP_001066897.2| peptide chain release factor 2, programmed [Burkholderia pseudomallei 1106a] gi|254200276|ref|ZP_04906642.1| peptide chain release factor 2 [Burkholderia mallei FMH] gi|254209352|ref|ZP_04915698.1| peptide chain release factor 2 [Burkholderia mallei JHU] gi|81604734|sp|Q62J00|RF2_BURMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|81607820|sp|Q63SP0|RF2_BURPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229576668|sp|A3NX26|RF2_BURP0 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|52210304|emb|CAH36283.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243] gi|52427217|gb|AAU47810.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei ATCC 23344] gi|147749872|gb|EDK56946.1| peptide chain release factor 2 [Burkholderia mallei FMH] gi|147750125|gb|EDK57196.1| peptide chain release factor 2 [Burkholderia mallei JHU] gi|213385360|gb|ABN92528.3| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1106a] Length = 367 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 180/350 (51%), Positives = 251/350 (71%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G D+D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 364 >gi|304386240|ref|ZP_07368573.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM 20284] gi|304327597|gb|EFL94824.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM 20284] Length = 362 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 174/355 (49%), Positives = 232/355 (65%), Gaps = 1/355 (0%) Query: 1 MKL-SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 MK+ ++ GGLFD D + +S K +P W + +A+ ++ E L Sbjct: 1 MKICKKRSLTSGGLFDLDALNESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNF 60 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 K + D + + + LEL E D + E D L + + + LL+G+ D+N+A L Sbjct: 61 KNLTDHVENLEVTLELLEMEADPDVQAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAIL 120 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+H GAGGTESQDW +MLLRMYTRWAE+ +FK + + GE AGI S T+ + G NAYG Sbjct: 121 EIHPGAGGTESQDWGSMLLRMYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYG 180 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +L+ E+GVHRLVR+SP+DS RRHTSF+S+ V P +DDS+E+ I+ D R+D YR+SGAG Sbjct: 181 YLRSEKGVHRLVRLSPFDSAGRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAG 240 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH+N T SAVRITH+PTG+VV Q ERSQ +N+ A NML+AKL+ELE QK+ E Sbjct: 241 GQHINKTSSAVRITHLPTGIVVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKL 300 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E ++ EIGWG QIRSYV PY MVKD RTN+E + V+DGDLDDF+ A L K Sbjct: 301 EGTQLEIGWGSQIRSYVFHPYSMVKDHRTNLETANVQGVMDGDLDDFINAYLQWK 355 >gi|269103439|ref|ZP_06156136.1| peptide chain release factor 2 [Photobacterium damselae subsp. damselae CIP 102761] gi|268163337|gb|EEZ41833.1| peptide chain release factor 2 [Photobacterium damselae subsp. damselae CIP 102761] Length = 347 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 181/344 (52%), Positives = 240/344 (69%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ + D Sbjct: 2 SLGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+E +D E L ++ ++ +F + SG+ D +D YL++ AG+GGT Sbjct: 62 VEGLLELAVEAEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDGSDCYLDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVH Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRISGEYAYGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+S +VYP VDD+I+I+I+ SD RID YRASGAGGQHVNTT+S Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEVDDNIDIDINPSDLRIDVYRASGAGGQHVNTTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPT VVQCQ +RSQHKNK QA L+AKL+ELE+QK+ E SK++IGW Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLKAKLFELEMQKQNAEKQANEDSKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 344 >gi|39997376|ref|NP_953327.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA] gi|39984267|gb|AAR35654.1| peptide chain release factor 2, programmed frameshift [Geobacter sulfurreducens PCA] gi|307634992|gb|ADI85036.2| peptide chain release factor 2 [Geobacter sulfurreducens KN400] Length = 372 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 182/348 (52%), Positives = 241/348 (69%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 ++ L G D D+ + + L + P W N EA+ ++RER ++ I + Sbjct: 14 ERIAKLRGSLDIDSKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNR 73 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + D +L+EL E D + L E ++ EVE +F+ +LSG D N ++ ++AG Sbjct: 74 QADDIRVLIELGEEAQDEATLDEVRALNDSLEREVEGAEFQRMLSGPHDKNSCFVSINAG 133 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDWA MLLRMY R+ E++ +KTE + G+EAG+KSAT + G AYG+LK E Sbjct: 134 AGGTEAQDWAEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAE 193 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G+HRLVRISP+DSN+RRHTSF+S++V+P ++D IEI+I+ESD R+DTYR+SGAGGQHVN Sbjct: 194 AGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVN 253 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+TH+PTG+VV CQ ERSQH NKA A MLRAKLYE ELQ+RE A+ K Sbjct: 254 TTDSAVRLTHLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKK 313 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IGWG QIRSYVL PY+MVKDLRT +E +P VLDG L+DF+ A L Sbjct: 314 DIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEDFVVAFLM 361 >gi|296112892|ref|YP_003626830.1| peptide chain release factor 2 [Moraxella catarrhalis RH4] gi|295920586|gb|ADG60937.1| peptide chain release factor 2 [Moraxella catarrhalis RH4] gi|326564445|gb|EGE14672.1| peptide chain release factor 2 [Moraxella catarrhalis 103P14B1] gi|326566640|gb|EGE16781.1| peptide chain release factor 2 [Moraxella catarrhalis 12P80B1] gi|326567583|gb|EGE17698.1| peptide chain release factor 2 [Moraxella catarrhalis BC1] gi|326569431|gb|EGE19491.1| peptide chain release factor 2 [Moraxella catarrhalis BC8] gi|326571371|gb|EGE21386.1| peptide chain release factor 2 [Moraxella catarrhalis BC7] gi|326576569|gb|EGE26476.1| peptide chain release factor 2 [Moraxella catarrhalis 101P30B1] gi|326577414|gb|EGE27298.1| peptide chain release factor 2 [Moraxella catarrhalis O35E] Length = 349 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 185/346 (53%), Positives = 245/346 (70%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD ++ +RL +N + E+P +W N A + +E+ LD + I + +L Sbjct: 3 KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLD 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D +LELA+E+DD S+L + L VE +F + SGE D+N+ YL++ +G+GG Sbjct: 63 DAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA MLLRMY RW E FK E LE+ +G AGIKSAT+++KG A+GWL+ E GV Sbjct: 123 TEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRIDTYRSSGAGGQHVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH PTGVVV CQ ERSQH NK A MLRAKLYELE+QKR E E SK++IG Sbjct: 243 SAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIG 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E ++ + VL+GDLD F++A+L Sbjct: 303 WGSQIRSYVLDDS-RIKDLRTGVETSNTTAVLNGDLDKFIEASLKA 347 >gi|217976907|ref|YP_002361054.1| hypothetical protein Msil_0721 [Methylocella silvestris BL2] gi|217502283|gb|ACK49692.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 376 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 216/352 (61%), Positives = 268/352 (76%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L D A +RL+ LN K EDP+LW + A+ +MRER L++ + + Sbjct: 12 IKQSMGLLRRHLDVATAERRLAELNAKVEDPNLWDDADAAQKIMRERTDLEDRLGSLARF 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D + L+ELA E+D + +E L+ +KLE E +Q E+LLSGE D ND Y+EVH Sbjct: 72 DSELDDAVTLVELAEAEEDTATEKEAIGQLKSLKLEAERRQIEALLSGEVDGNDTYIEVH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA ML RMY RWAE+ KFK E +E G+EAG+KS TLL+KG NA+GW K Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHKFKVEVIEETAGDEAGLKSGTLLVKGHNAHGWAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+WVYPV+DD I+I++ ESDCRIDTYR+SGAGGQH Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVIDDKIDIDVKESDCRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE E++KRE AN E+S Sbjct: 252 VNTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEQEIEKREAAANATEAS 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYVLQPYQ+VKDLR+ + +P DVLDGDLD FM+A LA + Sbjct: 312 KTEIGWGHQIRSYVLQPYQLVKDLRSGVTSGTPDDVLDGDLDSFMEAALAQR 363 >gi|144897340|emb|CAM74204.1| peptide chain release factor 2 [Magnetospirillum gryphiswaldense MSR-1] Length = 372 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 213/352 (60%), Positives = 268/352 (76%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L +WD+A+ RL LN + EDP+LW + +A+ LMRER LD +S +++ Sbjct: 12 IRKSVALLKRHLNWDDALMRLDELNAQAEDPNLWNDGDKAQKLMRERTQLDTQVSGCRKL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L L+ELA E D + + L+ +K + E+LLSGEAD+ND YLE++ Sbjct: 72 EADLDDMLGLIELADAEGDTDVAADAEAQLRALKDLAGKLELETLLSGEADANDCYLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+QDWA MLLRMY+RWAE+ +K E +E GE AGIKSAT+ + G NAYGWLK Sbjct: 132 SGAGGTEAQDWAEMLLRMYSRWAEQHGYKLEFVEESAGEGAGIKSATIRVVGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RR TSF+S WVYPVVDD+I+I+I+ESDCRIDTYRASGAGGQH Sbjct: 192 TEAGVHRLVRISPFDSNARRQTSFASAWVYPVVDDTIDIQINESDCRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE A E + Sbjct: 252 INKTDSAVRITHIPTGIAVACQTERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDT 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQM+KDLRTN+E + VLDGDLD FM A+LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMIKDLRTNVETSDTQAVLDGDLDMFMAASLASR 363 >gi|307129433|ref|YP_003881449.1| putative peptide chain release factor 2 [Dickeya dadantii 3937] gi|306526962|gb|ADM96892.1| putative peptide chain release factor 2 [Dickeya dadantii 3937] Length = 365 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 188/351 (53%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSERTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD +T L +++ ++ +F + SGE DS D YL++ Sbjct: 74 VQGLDDVSGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363 >gi|300718200|ref|YP_003743003.1| peptide chain release factor 2 [Erwinia billingiae Eb661] gi|299064036|emb|CAX61156.1| Peptide chain release factor 2 [Erwinia billingiae Eb661] Length = 348 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 183/347 (52%), Positives = 237/347 (68%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D +RL +N + E P +W A+ L +ER L+ + + +++ L Sbjct: 1 MAFSGGIFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAIVDTLDQMEQGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E DD ET L ++ ++ +F + SGE DS D Y+++ AG+G Sbjct: 61 EDVRGLLELAVEADDEETFNETIAELDVLEKKLGELEFRRMFSGEYDSADCYIDIQAGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML+RMY RWAE + FKTE +E +GE AG KSATL I G A+GWL+ E G Sbjct: 121 GTEAQDWAGMLVRMYLRWAEAKGFKTEIIEESEGEVAGTKSATLRIIGDYAFGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T Sbjct: 181 VHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++I Sbjct: 241 ESAVRITHLPTNTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQSLEDNKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 GWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 346 >gi|251790993|ref|YP_003005714.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591] gi|247539614|gb|ACT08235.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591] Length = 365 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 188/351 (53%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD +T L +++ ++ +F + SGE DS D YL++ Sbjct: 74 VQGLDDVAGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363 >gi|78223569|ref|YP_385316.1| peptide chain release factor 2 [Geobacter metallireducens GS-15] gi|78194824|gb|ABB32591.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter metallireducens GS-15] Length = 364 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 180/342 (52%), Positives = 235/342 (68%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GGLFD D+ + + + P W + +A+ L+RER ++ + + + D Sbjct: 12 GGLFDIDSKREDIQEMEAHIAAPGFWDDNEKAQQLLRERTRIEKILELWDRLTRQADDIR 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+EL E D L E +++ +VE +F+ +LSG D N Y ++AGAGGTE+ Sbjct: 72 VLIELGEEAGDEGTLDEVRALNDQLEKDVEGAEFQRMLSGTHDKNACYFSINAGAGGTEA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY R+ E++ +KTE + G+EAG+KSAT + G AYG+LK E G+HRL Sbjct: 132 QDWAEMLLRMYLRYCERKGWKTEITDYQGGDEAGVKSATFTVDGEYAYGYLKAEAGIHRL 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN+RRHTSF+S++ +P ++D IE+ I+E+D RIDTYR+SGAGGQHVNTTDSAV Sbjct: 192 VRISPFDSNARRHTSFASVFAFPEIEDDIEVTINEADLRIDTYRSSGAGGQHVNTTDSAV 251 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+V Q ERSQH NKA A MLRAKLYE ELQ+RE A K EIGWG Sbjct: 252 RITHIPTGLVAASQCERSQHMNKATAMKMLRAKLYEKELQEREAKAAEIGGEKKEIGWGS 311 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL PY+MVKDLRT +E +P VLDGDL++F+ A L Sbjct: 312 QIRSYVLHPYKMVKDLRTGVETGNPDAVLDGDLEEFIVAFLM 353 >gi|238787318|ref|ZP_04631117.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641] gi|238724580|gb|EEQ16221.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641] Length = 347 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 183/343 (53%), Positives = 237/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ ++ I ++ + D Sbjct: 4 GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSALEEIVTTIDQLDQGMEDVS 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+GGTE+ Sbjct: 64 GLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E GVHRL Sbjct: 124 QDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 184 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Sbjct: 244 RITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 QIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 345 >gi|258512512|ref|YP_003185946.1| hypothetical protein Aaci_2552 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479238|gb|ACV59557.1| conserved hypothetical protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 383 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 235/353 (66%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ +L G D R++ L P W + A+ ++ E + + + ++ + Sbjct: 15 MATRLADFGRSLDVAGKEHRIATLEALMAAPDFWDDPDRAQKIIAEMNGVKSVVDTMRRL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D + L+LA EEDD + E + +++K E++ + + +LSGE D N+A LE+H Sbjct: 75 ESLLQDAEVALQLAQEEDDHDLFAEANRLAEQLKSEMDEFELQLMLSGEYDKNNAILELH 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRWAE +K E L+ GEEAGIKS TLL+KG NAYG+LK Sbjct: 135 PGAGGTESQDWASMLLRMYTRWAEDHGYKVEVLDYLPGEEAGIKSVTLLVKGHNAYGYLK 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQ 241 E+GVHRLVRISP+D++ RRHTSF+S+ V P + + + IEI + RIDTYR++GAGGQ Sbjct: 195 AEKGVHRLVRISPFDASGRRHTSFASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV CQ ERSQ +N+A+A +L+++L ++RE+ Sbjct: 255 HVNTTDSAVRITHIPTGIVVTCQSERSQIQNRARAMEILKSRLAAKRREEREQELAQLRG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIRSYV PY +VKD RTN E ++ V+DG++D F+ A L + Sbjct: 315 EQKEIAWGSQIRSYVFHPYSLVKDHRTNYETSNTQAVMDGEIDPFIHAYLRWQ 367 >gi|242240700|ref|YP_002988881.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703] gi|242132757|gb|ACS87059.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703] Length = 365 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 188/351 (53%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I+++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEMIVDTIEQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL+LA+EEDD ET L +++ ++ +F + SGE DS D Y+++ Sbjct: 74 NQGLEDVTGLLDLAVEEDDEETFNETIIELDQLENKLGQLEFRRMFSGEYDSADCYIDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ + G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESEGEVAGIKSATIKVVGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE ELQK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYEFELQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363 >gi|16761822|ref|NP_457439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143309|ref|NP_806651.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414987|ref|YP_152062.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363916|ref|YP_002143553.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|61230204|sp|P0A289|RF2_SALTY RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|61230205|sp|P0A290|RF2_SALTI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|76363351|sp|Q5PJG1|RF2_SALPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|238690721|sp|B5BFK6|RF2_SALPK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|25299688|pir||AG0871 peptide chain release factor 2 (RF-2) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|154276|gb|AAA72914.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16504124|emb|CAD02871.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Typhi] gi|29138943|gb|AAO70511.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129244|gb|AAV78750.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095393|emb|CAR60952.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 365 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 187/351 (53%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + N L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|39546356|ref|NP_461957.2| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|267995195|gb|ACY90080.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|323131397|gb|ADX18827.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 358 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 187/344 (54%), Positives = 238/344 (69%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL +N + E P +W A+ L +ER L+ + + ++ L D Sbjct: 14 LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMTQGLDDV 73 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE Sbjct: 74 SGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 133 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ E GVHR Sbjct: 134 AQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHR 193 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 194 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 253 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 254 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG 313 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 SQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 356 >gi|309973325|gb|ADO96526.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae R2846] Length = 365 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 184/353 (52%), Positives = 249/353 (70%), Gaps = 1/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + LS + + L G D+D V+RL +N + E P +W + +A+ L +ER L+ ++ IK Sbjct: 12 IDLSDRTSVLRGYLDFDAKVERLEEVNAELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L D LLELA+E +D E L ++ ++E +F + SGE D+ D Y++ Sbjct: 72 NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GW Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 312 DNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363 >gi|83942252|ref|ZP_00954713.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36] gi|83846345|gb|EAP84221.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36] Length = 374 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+S+ L L D + A RL N + EDP+LW + A+ LMR+RQ L ++I+ + Sbjct: 11 KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D ++ E L+++ K+ E+LL+GEAD ND +LE+ Sbjct: 71 IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWAN+L RMY RWAEK+ +K E GEEAGIKSAT I GPNAYGWL Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M A LA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGAALAL 361 >gi|16126117|ref|NP_420681.1| peptide chain release factor 2 [Caulobacter crescentus CB15] gi|221234887|ref|YP_002517323.1| peptide chain release factor 2 [Caulobacter crescentus NA1000] gi|24638156|sp|Q9A752|RF2_CAUCR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790910|sp|B8GWM3|RF2_CAUCN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|13423319|gb|AAK23849.1| peptide chain release factor 2 [Caulobacter crescentus CB15] gi|220964059|gb|ACL95415.1| bacterial peptide chain Release factor 2 (RF-2) [Caulobacter crescentus NA1000] Length = 371 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 212/347 (61%), Positives = 256/347 (73%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 +C GG+FDWD A+++L LN + EDP LW EA+ + RER +L + ++ I+ L Sbjct: 14 DCSGGVFDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLK 73 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ELA E D L + L+ +K + E+LLSGEAD ND Y+E+++GAGG Sbjct: 74 DALEYAELAEMESDEDSLNDARAQLKSLKERAGRAELEALLSGEADGNDCYVEINSGAGG 133 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TES DWA +LLRMYTRWA TE +E DG++AGIKSATLL+KG NAYGWLK E GV Sbjct: 134 TESCDWAGILLRMYTRWANAHGMTTELIEETDGDQAGIKSATLLVKGANAYGWLKTEAGV 193 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIEI+ SD R DTYRASGAGGQH+N TD Sbjct: 194 HRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEINPSDVRTDTYRASGAGGQHINKTD 253 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+ V CQ RSQH+N+ +AW MLRA+LYE ELQKRE E KT+IG Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQKTDIG 313 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLAQR 360 >gi|271499213|ref|YP_003332238.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586] gi|270342768|gb|ACZ75533.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586] Length = 365 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 187/351 (53%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 VQGLDDVAGLLELAVEADDEETFNEAIAELDLLEDKLGQLEFRRMFSGEYDSADCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363 >gi|83955487|ref|ZP_00964118.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1] gi|83840131|gb|EAP79306.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1] Length = 374 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+S+ L L D + A RL N + EDP+LW + A+ LMR+RQ L ++I+ + Sbjct: 11 KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D ++ E L+++ K+ E+LL+GEAD ND +LE+ Sbjct: 71 IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWAN+L RMY RWAEK+ +K E GEEAGIKSAT I GPNAYGWL Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M A LA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361 >gi|260581088|ref|ZP_05848909.1| peptide chain release factor 2 [Haemophilus influenzae RdAW] gi|260092217|gb|EEW76159.1| peptide chain release factor 2 [Haemophilus influenzae RdAW] Length = 351 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 185/347 (53%), Positives = 248/347 (71%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L C GG+FD+D V+RL +N + E P +W + +A+ L +ER L+ ++ IK ++ L Sbjct: 4 LQCFGGIFDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGL 63 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E +D E L ++ ++E +F + SGE D+ D Y+++ AG+G Sbjct: 64 EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G Sbjct: 124 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++I Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 GWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349 >gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008] gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella parvula DSM 2008] Length = 368 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 244/353 (69%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L ++ +G F+ R+ L+ + DP W N +A+ + +E L NA+ K+ Sbjct: 11 NLEERIYGMGIHFNIAQKEDRIFTLDVQMSDPTFWDNPDKAREISQEATQLKNAVESYKQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D ++LE+A++EDD S+ E + +++I+ +E ++ LLSGE D+N+A L Sbjct: 71 LVSDIEDANVMLEMAIDEDDLSMESEIKEYVKQIEETLEKQEVLLLLSGEYDANNAILTF 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW +ML+RMY RWAEK F E ++ G+EAGIKSAT L+KG NA+G+L Sbjct: 131 HAGAGGTEAQDWCSMLIRMYLRWAEKSGFSIELMDEQPGDEAGIKSATFLVKGENAFGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+ +RRHTSF+++ V P +DD++EI I D ++DTYRASGAGGQ Sbjct: 191 KSEKGVHRLVRISPFDAAARRHTSFAAVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSAVR+TH PTG+VVQCQ +RSQ +N+ QA +LRAKL+ELEL+K+ E+ Sbjct: 251 HINKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + I WG QIRSYV PY +VKD RT++E + V+DG+LD F++ L + Sbjct: 311 TYQAIEWGSQIRSYVFHPYNLVKDHRTSVETGNVQAVMDGNLDPFIEGFLKKE 363 >gi|329850508|ref|ZP_08265353.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19] gi|328840823|gb|EGF90394.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19] Length = 358 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 206/348 (59%), Positives = 256/348 (73%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++C GG+FDWD A++RL LN + EDP LW EA+ + RER L +I ++ ++ L Sbjct: 1 MDCSGGVFDWDVALRRLDELNARVEDPTLWDKPDEAQKINRERSKLSASIEAVRTLEKEL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + EL E D S+++E+ L+ +K + E+LLSGEAD NDAY+E+++GAG Sbjct: 61 KDAVEFAELGDMEGDESLIEESRAMLKGLKAHAGRAELEALLSGEADGNDAYVEINSGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA +L+RMYTRWA E E GE+AGIKS TL+IKG NAYGWLK E G Sbjct: 121 GTESCDWAGILMRMYTRWATAHGMTVEVEEETSGEQAGIKSTTLMIKGENAYGWLKTEAG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS++RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSSARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+THIPTG+ V CQ RSQH N+ +AW MLRA+LYE ELQKRE E KT+I Sbjct: 241 DSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYEQELQKREAAQQALEDQKTDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 GWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 301 GWGHQIRSYVLQPYQMVKDLRTNVETSDSQGVLDGDLDAFMGASLAQR 348 >gi|124267958|ref|YP_001021962.1| peptide chain release factor 2 [Methylibium petroleiphilum PM1] gi|124260733|gb|ABM95727.1| bacterial peptide chain release factor 2 (bRF-2) [Methylibium petroleiphilum PM1] Length = 355 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 170/342 (49%), Positives = 238/342 (69%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RLS +N EDP +W + A+ L RE++ L+ + I ++ L DN Sbjct: 12 GGIFDYDEKSRRLSEVNAALEDPTVWNDPKNAQALGREKKSLETVVDTIASLERNLADNA 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E++ EE D L+ + +VE +F + S AD ++ ++++ AGAGGTE+ Sbjct: 72 ELYEMSKEEGDEDGLRAIEAETLGLAAQVEQLEFRRMFSNPADPSNCFIDIQAGAGGTEA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++ E++ FK + +G+ AGIKSAT+ ++G A+G L+ E GVHRL Sbjct: 132 CDWASMLLRQYLKYCERKGFKATIEDETEGDTAGIKSATIKVEGDYAFGHLRTETGVHRL 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP VDDSIEIEI+ +D R DT+RASGAGGQH+N TDSAV Sbjct: 192 VRKSPFDSSGGRHTSFASLFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAV 251 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E E +KT++GWG Sbjct: 252 RLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDTKTDVGWGH 311 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 312 QIRSYVL-DNSRIKDLRTNVEISNTQKVLDGDLDAFIEASLK 352 >gi|256006007|ref|ZP_05430946.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360] gi|281417086|ref|ZP_06248106.1| peptide chain release factor 2 [Clostridium thermocellum JW20] gi|255990030|gb|EEU00173.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360] gi|281408488|gb|EFB38746.1| peptide chain release factor 2 [Clostridium thermocellum JW20] Length = 357 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 232/342 (67%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD + ++ L K +P W + ++ ++++ + L + + ++ + D + Sbjct: 4 GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L EL +EE D S++ E + + K E E + E+LL+G+ D N+A L +HAGAGGTE+ Sbjct: 64 TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ML RMYTRWAEK+ F + L+ DGEEAGIKS T + G NAYG+LK E+GVHRL Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D++ RRHTSF+S+ V P ++D IE+ I+ D RIDTYR+SGAGGQH+N T+SAV Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+VV CQ ERSQ +NK A ML+AKL EL+ ++ +E + + EI WG Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV PY +VKD RTN E+ + V+DG+LD F+ + L+ Sbjct: 304 QIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345 >gi|182677929|ref|YP_001832075.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica ATCC 9039] gi|182633812|gb|ACB94586.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica ATCC 9039] Length = 376 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 220/352 (62%), Positives = 269/352 (76%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D D + +RL LN K E+P LW + A+ +MRER L+ + IK+ Sbjct: 12 IKQSLGLLRRHLDVDTSTRRLEELNAKVENPDLWNDAEAAQKIMRERTELEERLGSIKQF 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L+ELA E D + +E D L+ +K+E E +Q E+LLSGE DSND Y+EVH Sbjct: 72 EGDLDDAATLIELAEAEGDEASEKEGIDLLKGLKIEAERRQIEALLSGEVDSNDTYIEVH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA ML RMY RWAE+ +FK E +E G+EAGIKSATLL+KG NA+GW K Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHRFKVEIIEETAGDEAGIKSATLLVKGHNAHGWAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+WVYPV+DD IEI++ ESDCRIDTYR+SGAGGQH Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVIDDKIEIDVKESDCRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE EL++RE AN E++ Sbjct: 252 INTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEKELERREAEANATEAT 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYVLQPYQ+VKDLRT +P +VLDGDLD FM+A LA K Sbjct: 312 KTEIGWGHQIRSYVLQPYQLVKDLRTGTTSGTPDEVLDGDLDTFMEAALAQK 363 >gi|251799706|ref|YP_003014437.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2] gi|247547332|gb|ACT04351.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2] Length = 368 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 234/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++++L L G D D ++ ++ K P W + +A+ ++ E + + + + Sbjct: 12 EVAKRLQELRGSLDLDLKLEHIANFEEKMTAPDFWDDNTKAQGIISELNAIKSVVEHYER 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L+ELA EE D S+ E + + +V + + LL+ D +A LE+ Sbjct: 72 LNADCEDLQTLIELADEESDDSLEAEVIGGIASLNEKVNGFELQLLLNQPYDKLNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA ML RMYTRWAEKR FK E L+ DG+EAGIKS T+ +KG NAYG+L Sbjct: 132 HPGAGGTESQDWAQMLYRMYTRWAEKRGFKVEVLDYLDGDEAGIKSVTIAVKGYNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P + + IE+EI D ++DTYRASGAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCDVVPEITEDIEVEIRTEDLKVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHIPTG+VV CQQERSQ +N+ +A NMLR+KLYE +++++++ Sbjct: 252 HVNKTESAIRITHIPTGIVVACQQERSQIQNRERAMNMLRSKLYERKIEEQQKHLAEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +++I WG QIRSYV PY MVKD RT++E + V+DGDLD F+ L + Sbjct: 312 EQSDIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYLRSQ 364 >gi|206560551|ref|YP_002231316.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315] gi|238693117|sp|B4EDB1|RF2_BURCJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|198036593|emb|CAR52490.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315] Length = 367 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 179/352 (50%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L + L G D+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + Sbjct: 14 LDLRNRAGELRGYLDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLT 73 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + L D L L ELA EE D L + ++ +++ V +F + S AD N+ +++ Sbjct: 74 ALDSDLRDALDLFELAREEGDEDTLLASEEDAAKLEARVGDIEFRRMFSNPADPNNCFID 133 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+ Sbjct: 134 IQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGF 193 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGG Sbjct: 194 LRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + E Sbjct: 254 QHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLE 313 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 314 SSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTRAVLDGDLDDFISASLK 364 >gi|1172913|sp|P43918|RF2_HAEIN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|309751145|gb|ADO81129.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae R2866] Length = 365 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 184/353 (52%), Positives = 249/353 (70%), Gaps = 1/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + LS + + L G D+D V+RL +N + E P +W + +A+ L +ER L+ ++ IK Sbjct: 12 IDLSDRTSVLRGYLDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L D LLELA+E +D E L ++ ++E +F + SGE D+ D Y++ Sbjct: 72 NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GW Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 312 DNKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363 >gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 365 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 160/354 (45%), Positives = 237/354 (66%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L + +G D + + ++ ++ K +P W ++ +++ L ++ + L IS + Sbjct: 10 LNLIDTIKEMGASLDIEGLKREVAEIDKKMAEPDFWNDLQKSQELSKKLKDLKELISEYE 69 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 I+ D L+EL +EE D S+ QE + + + ++ + ++LLSG D N+A L Sbjct: 70 SIEKLCEDLNALIELGIEEGDESLSQEVHEEYKSLSKKINDMKIKTLLSGPYDRNNAILS 129 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +HAGAGGTE+QDW MLLRMY RWA + ++ E ++ G++AG+KS T+++KG AYG+ Sbjct: 130 IHAGAGGTEAQDWTEMLLRMYMRWASSKNYEVETVDYLPGDDAGVKSVTIMVKGAFAYGY 189 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE GVHRLVRISP+D+ RRHTSF+ + V P +DD I+++I D +IDTYR+SGAGG Sbjct: 190 LKGEAGVHRLVRISPFDAAGRRHTSFALVEVLPEIDDDIKVDIRPEDLKIDTYRSSGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SA+RITHIPTG++VQCQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 250 QHVNKTESAIRITHIPTGIIVQCQSERSQMQNRETAMKMLKAKLMDLMIKEQKEKIEDLK 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E GWG QIRSYV QPY +VKD RTN E + + V+DGD+D+F+ A L K Sbjct: 310 GEHKEAGWGNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGDIDEFINAYLKQK 363 >gi|297583381|ref|YP_003699161.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10] gi|297141838|gb|ADH98595.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10] Length = 366 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 165/353 (46%), Positives = 233/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ +L G D D +++ L + DP W N EA+ ++ E L + +E Sbjct: 12 NMATRLADFRGSLDLDEKEAQIASLEDRMADPSFWDNQEEAQKVIGEANALKSYAHTYRE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D + L EE+D ++ + ++ ++ + + + LLSG D+N+A LE+ Sbjct: 72 LEAAHEDLEVQFGLLEEENDPEMMADLEAGIEDLQKRLNQFELQLLLSGPYDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQD+A+MLLRMYTR+AE+ +K E L+ G+EAG+KS TL I G NAYG L Sbjct: 132 HPGAGGTESQDYASMLLRMYTRFAEQMNWKVETLDYLPGDEAGVKSVTLQITGHNAYGHL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +++ IEI++ + RIDT+R+SGAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCDVMPELNEDIEIDVKPDELRIDTFRSSGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVR+TH+PT +V CQ ERSQ KN+ +A ML+AKL++LE++++ + A+ Sbjct: 252 HVNTTDSAVRMTHLPTNTIVSCQSERSQIKNREKAMKMLKAKLFQLEIERQRQEADEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++EIGWG QIRSYV PY MVKD RTN E + V+DGDL F+ A L + Sbjct: 312 EQSEIGWGSQIRSYVFHPYNMVKDHRTNKETGNTQAVMDGDLMPFIDAYLRSQ 364 >gi|262274920|ref|ZP_06052731.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886] gi|262221483|gb|EEY72797.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886] Length = 347 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 179/344 (52%), Positives = 242/344 (70%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD+D +RL +N + E P +W + A+ L RER L+ + I ++ Sbjct: 2 SLGGIFDYDAKKERLEEVNAELEQPDVWNDPERAQALGRERASLEAVVETIDQLAQGGEY 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+EE+D E L ++ ++ +F + SG+ D++D Y+++ AG+GGT Sbjct: 62 ITELLELAVEENDQETFDEIEPELNDLEDKLAKLEFRRMFSGDHDASDCYIDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVH Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRISGEYAYGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+S ++YP VD++I+I+I+ +D RID YRASGAGGQHVNTT+S Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIDINPADLRIDVYRASGAGGQHVNTTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E++K++IGW Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEAAKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLK 344 >gi|51597475|ref|YP_071666.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP 32953] gi|81638630|sp|Q666T2|RF2_YERPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|51590757|emb|CAH22402.1| Peptide chain release factor 2 [Yersinia pseudotuberculosis IP 32953] Length = 366 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 187/352 (53%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGL-FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 LS + L G FD+D +RL +N + E P +W A+ L +ER L+ ++ I + Sbjct: 14 LSDRTAVLRGYLFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQ 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LLELA+E DD ET L+ + ++ +F + SGE D + YL++ Sbjct: 74 LEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDL 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+KSAT+ I G A+GWL Sbjct: 134 QAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ Sbjct: 194 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E Sbjct: 254 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLED 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 364 >gi|284048024|ref|YP_003398363.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM 20731] gi|283952245|gb|ADB47048.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM 20731] Length = 366 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 168/354 (47%), Positives = 232/354 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L L G +R+ L + P W + +A+ + +E +L + Sbjct: 12 QLKDKLEELKGGLKIAQKEERIEDLEHQMAAPGFWDDPDKAQTVAQEANNLKTEVETYHG 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +L D L E+A+EE D S+ E + ++ + + + LLS + D+N+A L + Sbjct: 72 LAAKLDDVETLWEMAMEEKDDSLQGEIEEEVENARKTLADLELGMLLSDQYDANNAILTL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW NMLLRMYTR+AE++ F E L++ GEEAGIKSATL ++G NAYG+L Sbjct: 132 HAGAGGTEAQDWTNMLLRMYTRYAEQKGFTVELLDVLPGEEAGIKSATLTVQGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+N+RRHTSF+++ V P +D+++E+ ++ D R+D YRASGAGGQ Sbjct: 192 KSEKGVHRLVRISPFDANARRHTSFAAVDVMPELDETVEVNLNMDDVRVDYYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVR+THIPTG+VVQCQ ERSQ +NK + +LRAKLYE E +++ + Sbjct: 252 HVNKTSSAVRMTHIPTGIVVQCQNERSQLQNKERCLALLRAKLYEYEKAIQDKKISELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 I WG QIRSYV QPY MVKD RT E + V+DGDLD F++A L K Sbjct: 312 DYQAIEWGSQIRSYVFQPYTMVKDHRTGAETGNIQAVMDGDLDPFVEAYLRSLK 365 >gi|262373739|ref|ZP_06067017.1| peptide chain release factor 2 [Acinetobacter junii SH205] gi|262311492|gb|EEY92578.1| peptide chain release factor 2 [Acinetobacter junii SH205] Length = 351 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 177/343 (51%), Positives = 240/343 (69%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL + + EDP +W + A+ + +E+ L+N + + ++L D Sbjct: 7 YGGIFDYDLKAERLEEVLRELEDPAIWNDQSRAQAIAKEKGSLENTLGVFDRLAEQLDDA 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +L+LA+E DD S+L++ L + + +F + S D N +LE+ +G+GGTE Sbjct: 67 KAMLDLAVEADDESLLEDVQAELDSAEQALGNLEFRRMFSNPMDPNPCFLEIQSGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIKSAT+ + G AYGWL+ E GVHR Sbjct: 127 AQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAYGWLRTESGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+ RHTSFS+++V P +DD+IEI+I+ SD R DTYRASGAGGQH+N TDSA Sbjct: 187 LVRKSPFDSNNNRHTSFSAVFVSPEIDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH PTG+VV CQ +RSQH N+ AW LRAKLYELE+ KR E A E SK++IGWG Sbjct: 247 VRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 307 SQIRSYVLDDS-RIKDLRTGVENSNTKAVLDGDLDKFIEASLK 348 >gi|158425248|ref|YP_001526540.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571] gi|158332137|dbj|BAF89622.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571] Length = 376 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 204/353 (57%), Positives = 268/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++ ++ L + D + +RL+ LN EDP LW + A+ +M+ER L++A++ I Sbjct: 11 EINASVDLLRQHLNVDRSRRRLAELNAIAEDPTLWDDPERAQKIMQERTSLEDALNAIDR 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I L DN+ L+EL E D S++ E + L +K E+ ++ ++LLSGEADSND YLEV Sbjct: 71 ITRDLTDNIELIELGEAEGDESVITEAAGALDALKAELARRELDALLSGEADSNDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGT+SQDWA MLLRMY RW E+ FK E ++ GE+AG+KSAT+++KG NAYGWL Sbjct: 131 HAGAGGTDSQDWAEMLLRMYRRWCERHGFKVELVDESAGEQAGLKSATIIVKGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN+RR TSF+SI VYPV+DD I +EI+ESD R+DT R+ GAGGQ Sbjct: 191 KTEAGVHRLVRISPFDSNARRQTSFASIDVYPVIDDRIVVEINESDVRVDTMRSGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+THIPTG+ V Q +RSQHKN+A AWNMLRAKL+E+EL+KREE A ++ Sbjct: 251 HVNKTESAVRLTHIPTGIAVVSQGDRSQHKNRATAWNMLRAKLFEMELKKREEAAAAEQA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++T+IGWG QIRSYVLQPYQ+VKDLRT + +P +VLDGDLD FM+A LA + Sbjct: 311 ARTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALAQR 363 >gi|194289273|ref|YP_002005180.1| peptide chain release factor rf-2 [Cupriavidus taiwanensis LMG 19424] gi|193223108|emb|CAQ69113.1| peptide chain release factor RF-2 [Cupriavidus taiwanensis LMG 19424] Length = 357 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 177/345 (51%), Positives = 247/345 (71%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D V RL +N EDP +W N A+ L +E++ L+ + + ++ D L Sbjct: 11 KIYGGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKMLEGVVGVLGKLTDDLV 70 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L ELA EE D L+ +++ + V +F + SGE D +A++++ AGAGG Sbjct: 71 GAEELFELAKEEGDDDTLESIEADVKGFEAVVADMEFRRMFSGEMDQANAFIDIQAGAGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ I+G A+G+L+ E GV Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP VDDS E+EI+ +D R+DTYRASGAGGQH+N TD Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEINPADLRVDTYRASGAGGQHINKTD 250 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++G Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 311 WGHQIRSYVL-DQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLK 354 >gi|227824555|ref|ZP_03989387.1| peptide chain release factor [Acidaminococcus sp. D21] gi|226905054|gb|EEH90972.1| peptide chain release factor [Acidaminococcus sp. D21] Length = 382 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 164/354 (46%), Positives = 233/354 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L L + +R+ L+ + P W + +A+ + +E +L + + Sbjct: 28 ELRNRLGELKTGLKIEPKKERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSEVDTFTS 87 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D L E+A+EE D +++ E L+ K + + LLS E D+N+A + + Sbjct: 88 LETKVDDLDTLWEMAMEEKDDTLVSEMESELEGAKHTLSELELGMLLSDEYDANNAIMNL 147 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW MLLRM+TR+AE + F+ E L++ GEEAG KSATL IKG NAYG+L Sbjct: 148 HAGAGGTEAQDWTGMLLRMFTRYAEGKGFEVELLDVLPGEEAGTKSATLAIKGHNAYGFL 207 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DSN+RRHTSF+++ V P +D+++E+ I+ D R+D YRASGAGGQ Sbjct: 208 KSEKGVHRLVRISPFDSNARRHTSFAAVDVMPEIDNTVEVNINMDDVRVDYYRASGAGGQ 267 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVR+TH+PTG+VVQCQ ERSQ +NK + +LRAKL+E E +++ + Sbjct: 268 HVNKTSSAVRMTHLPTGIVVQCQNERSQLQNKERCLQLLRAKLFEYEKAIQDQKISDLAG 327 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 I WG QIRSYV QPY +VKD RT E + V+DGDLD F+++ L K Sbjct: 328 DYQAIEWGSQIRSYVFQPYTLVKDHRTGAETGNIQAVMDGDLDLFVESYLRSLK 381 >gi|254261824|ref|ZP_04952878.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1710a] gi|254220513|gb|EET09897.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1710a] Length = 367 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 179/350 (51%), Positives = 250/350 (71%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G +D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 364 >gi|222150753|ref|YP_002559906.1| peptide chain release factor RF-2 [Macrococcus caseolyticus JCSC5402] gi|222119875|dbj|BAH17210.1| peptide chain release factor RF-2 [Macrococcus caseolyticus JCSC5402] Length = 350 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 177/349 (50%), Positives = 234/349 (67%), Gaps = 1/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + LGGLFD + + DP W + +A+ ++ + L + + +++ L Sbjct: 1 MTVLGGLFDLEEKETNIKEYEEMMADPDFWNDGDKAQDIINKNNALKSVVQEFSTLEEGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 ++ +L E+ EE D QE + L ++ + + LLSGE D+N+A LE+H GAG Sbjct: 61 ENSEVLFEMYKEESDEDTHQELIEQLNTLQQIANDFELKMLLSGEFDANNAILELHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDW MLLRMY R+A+K+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+G Sbjct: 121 GTESQDWGEMLLRMYQRFADKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNT 245 VHRLVRISP+DS+ RRHTSF S V P +D+IEIEI+ D +IDTYRASGAGGQHVNT Sbjct: 181 VHRLVRISPFDSSGRRHTSFVSCEVTPEFDNDNIEIEINSEDIKIDTYRASGAGGQHVNT 240 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH PTG+VV CQ ERSQ KN+ QA ML+AKLY+ +++++E + E Sbjct: 241 TDSAVRITHQPTGIVVTCQNERSQIKNREQAMKMLKAKLYQKKIEEQEAELAAIRGEQKE 300 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IGWG QIRSYV PY MVKD RTN+E + + V+DGD+D F+ A L + Sbjct: 301 IGWGSQIRSYVFHPYSMVKDHRTNVETGNTNAVMDGDIDLFIDAYLKSQ 349 >gi|24638154|sp|Q8ZHK4|RF2_YERPE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|115346673|emb|CAL19556.1| peptide chain release factor 2 [Yersinia pestis CO92] Length = 366 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 186/352 (52%), Positives = 240/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 LS + L G D+D +RL +N + E P +W A+ L +ER L+ ++ I + Sbjct: 14 LSDRTAVLRGYLCDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQ 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LLELA+E DD ET L+ + ++ +F + SGE D + YL++ Sbjct: 74 LEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDL 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+KSAT+ I G A+GWL Sbjct: 134 QAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ Sbjct: 194 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E Sbjct: 254 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLED 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 NKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 364 >gi|89072535|ref|ZP_01159107.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34] gi|89051639|gb|EAR57092.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34] Length = 353 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 178/343 (51%), Positives = 238/343 (69%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG FD+D +RL +N + E P +W A+ L +ER L+ + I + + D Sbjct: 9 LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAVVETIDLLDQGVEDV 68 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D E L ++ ++ +F + +G+ D++D YL++ AG+GGTE Sbjct: 69 EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G AYGWL+ E GVHR Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E +K++IGWG Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 309 SQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350 >gi|125972886|ref|YP_001036796.1| peptide chain release factor 2 [Clostridium thermocellum ATCC 27405] gi|125713111|gb|ABN51603.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium thermocellum ATCC 27405] Length = 357 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 232/342 (67%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD + ++ L K +P W + ++ ++++ + L + + ++ + D + Sbjct: 4 GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L EL +EE D S++ E + + K E E + E+LL+G+ D N+A L +HAGAGGTE+ Sbjct: 64 TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNALLTLHAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ML RMYTRWAEK+ F + L+ DGEEAGIKS T + G NAYG+LK E+GVHRL Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D++ RRHTSF+S+ V P ++D IE+ I+ D RIDTYR+SGAGGQH+N T+SAV Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+VV CQ ERSQ +NK A ML+AKL EL+ ++ +E + + EI WG Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV PY +VKD RTN E+ + V+DG+LD F+ + L+ Sbjct: 304 QIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345 >gi|255320321|ref|ZP_05361506.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82] gi|255302760|gb|EET81992.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82] Length = 351 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 180/344 (52%), Positives = 242/344 (70%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG+FD+D +RL + + EDP +W + A+ + +E+ L+N I+ ++ + +L D Sbjct: 6 LYGGIFDYDLKKERLEEVLRELEDPSIWNDQSRAQAMAKEKGELENVINVLEGLSTQLED 65 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +L+LA+E DD S+L + L + + +F + S D N Y+E+ AG+GGT Sbjct: 66 AQAMLDLAVEADDESLLADVQAELSSAEEALAKLEFRRMFSNPMDPNPCYVEIQAGSGGT 125 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA+MLLRMY RW E+ FK E +E DG+ AGIKSAT+ ++G AYGWL+ E GVH Sbjct: 126 EAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVH 185 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDS Sbjct: 186 RLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDS 245 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PTG+VV CQ +RSQH N+ AW LRAKLYELE+ KR E A E SK++IGW Sbjct: 246 AVRLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGW 305 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 306 GSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLDKFIEASLK 348 >gi|239828320|ref|YP_002950944.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70] gi|239808613|gb|ACS25678.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70] Length = 367 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 175/353 (49%), Positives = 238/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L + G D + R+ L + P+ W + A+ ++ E L + + + Sbjct: 13 KMAKRLAEIRGSLDLETKQARIRELEEQMAAPNFWDDQKAAQTVINEANALKDLVGEFQS 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++R + + EL EE D + QE +++ + + + LL+ D N+A LE+ Sbjct: 73 LEERFENLEVTYELIKEEPDEDLQQELVAEAKKLTKDFSEFELQLLLNEPYDKNNAILEL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+ GEEAG+KS TLLIKG NAYG+L Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D++ RRHTSF S V P +DD IEIEI + ++DTYR+SGAGGQ Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVMPEMDDDIEIEIRPEEIKVDTYRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEIRG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L K Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365 >gi|217420389|ref|ZP_03451894.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 576] gi|226195477|ref|ZP_03791065.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei Pakistan 9] gi|237813009|ref|YP_002897460.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei MSHR346] gi|238561621|ref|ZP_00441741.2| peptide chain release factor 2, programmed frameshift [Burkholderia mallei GB8 horse 4] gi|242317384|ref|ZP_04816400.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1106b] gi|251767233|ref|ZP_04820018.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei PRL-20] gi|284159918|ref|YP_001059616.2| peptide chain release factor 2, programmed [Burkholderia pseudomallei 668] gi|217395801|gb|EEC35818.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 576] gi|225932437|gb|EEH28436.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei Pakistan 9] gi|237504244|gb|ACQ96562.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei MSHR346] gi|238524226|gb|EEP87660.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei GB8 horse 4] gi|242140623|gb|EES27025.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1106b] gi|243063468|gb|EES45654.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei PRL-20] gi|261825971|gb|ABN00993.2| peptide chain release factor 2, programmed frameshift [Burkholderia mallei NCTC 10229] gi|261835054|gb|ABO05438.2| peptide chain release factor 2, programmed frameshift [Burkholderia mallei NCTC 10247] gi|283775112|gb|ABN84239.2| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 668] Length = 367 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 179/350 (51%), Positives = 250/350 (71%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G +D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 364 >gi|294084599|ref|YP_003551357.1| protein chain release factor B [Candidatus Puniceispirillum marinum IMCC1322] gi|292664172|gb|ADE39273.1| Protein chain release factor B [Candidatus Puniceispirillum marinum IMCC1322] Length = 369 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 210/352 (59%), Positives = 267/352 (75%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S L L +++ AV RL+ L +T P W + A+ +MRE+ L+ I+ IK++ Sbjct: 12 ISSTLELLRKHVNFEVAVARLNDLEAQTTMPDFWNDQAVAQDVMREKNRLERQINLIKDM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + L+EL + E D ++ E L ++ E + +Q ESLLSGEAD+ND +LE+H Sbjct: 72 QAEMDDCVALIELGIAEGDDDVVAEAEAVLTKLVTEADKRQLESLLSGEADANDCFLEIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA ML+RMY RW E+R +K +E GEEAGIKS T+ I G NAYGWLK Sbjct: 132 AGAGGTEAQDWAQMLVRMYGRWCEQRGYKVHLIEESAGEEAGIKSVTMRIDGENAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIE+ + D RIDTYRASGAGGQH Sbjct: 192 TESGVHRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEVEDKDLRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH+PT +VVQCQ +RSQH+N+A A+NML+A+LYELELQKREE A+ +S Sbjct: 252 VNKTDSAIRITHLPTNIVVQCQNDRSQHRNRATAFNMLKARLYELELQKREEAASDAAAS 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVL PYQMVKDLRTN+EK + VLDGDLD F++A+LA + Sbjct: 312 KTDIGWGNQIRSYVLHPYQMVKDLRTNVEKGNAQGVLDGDLDSFIEASLAAR 363 >gi|119776010|ref|YP_928750.1| peptide chain release factor 2 [Shewanella amazonensis SB2B] gi|119768510|gb|ABM01081.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella amazonensis SB2B] Length = 364 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 181/346 (52%), Positives = 235/346 (67%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L LGG+FD+D +RL + + E +W N A+ L +ER L+N + I + L Sbjct: 17 LCSLGGIFDYDAKKERLEEVTRELESSDVWNNPERAQALGKERASLENVVKTIDTLDSGL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EE+D ++ L ++ +E +F + SG D +D YL++ +G+G Sbjct: 77 EDVEGLLELAVEEEDEGTFEDAKAELDELEKSLEDLEFRRMFSGPQDPSDCYLDIQSGSG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA M+LRMY RW E FK E +E+ DG+ AGIKSAT+ G AYGWL+ E G Sbjct: 137 GTEAQDWAEMVLRMYLRWGEAHDFKPELIEVSDGDVAGIKSATIKFTGEYAYGWLRTETG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ +D RID YRASGAGGQHVN T Sbjct: 197 VHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPADLRIDVYRASGAGGQHVNRT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT VVQCQ +RSQHKNK A L+AKLYELELQK+ E +K++I Sbjct: 257 ESAVRITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLYELELQKQNAEKQAAEDAKSDI 316 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 317 GWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLK 361 >gi|260599230|ref|YP_003211801.1| peptide chain release factor 2 [Cronobacter turicensis z3032] gi|260218407|emb|CBA33491.1| Peptide chain release factor 2 [Cronobacter turicensis z3032] Length = 342 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 183/341 (53%), Positives = 236/341 (69%), Gaps = 1/341 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD+D +RL +N + E P +W A+ L +ER L+ + + ++ L D L Sbjct: 1 MFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETLDQMSQGLDDVAGL 60 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LELA+E DD E L +++ ++ +F + SGE DS D YL++ AG+GGTE+QD Sbjct: 61 LELAVEADDEETFNEAVVELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQD 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA+MLLRMY RWAE R FKTE +E +GE AG+KSAT+ I G A+GWL+ E GVHRLVR Sbjct: 121 WASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRTETGVHRLVR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHVN T+SAVRI Sbjct: 181 KSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRI 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG QI Sbjct: 241 THIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 RSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 340 >gi|90580579|ref|ZP_01236384.1| putative peptide chain release factor 2 [Vibrio angustum S14] gi|90438237|gb|EAS63423.1| putative peptide chain release factor 2 [Photobacterium angustum S14] Length = 353 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 178/343 (51%), Positives = 238/343 (69%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG FD+D +RL +N + E P +W A+ L +ER L+ + I + + D Sbjct: 9 LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERASLEAVVETIDLLDQGVEDV 68 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D E L ++ ++ +F + +G+ D++D YL++ AG+GGTE Sbjct: 69 EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G AYGWL+ E GVHR Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E +K++IGWG Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 309 SQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350 >gi|167646537|ref|YP_001684200.1| peptide chain release factor 2 [Caulobacter sp. K31] gi|189039999|sp|B0SXB7|RF2_CAUSK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|167348967|gb|ABZ71702.1| peptide chain release factor 2 [Caulobacter sp. K31] Length = 367 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 205/347 (59%), Positives = 256/347 (73%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 +C GG+FDWD A+++L LN + EDP LW EA+ + R+R L + ++E++ L Sbjct: 14 DCSGGVFDWDAALRKLDELNARVEDPTLWDRPSEAQAVSRDRASLAARVGAVQELEGGLK 73 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ELA E D ++L++ L+ +K + E+LLSGEAD ND Y+E+++GAGG Sbjct: 74 DALEYAELADMEGDEALLEDARAQLKDLKDRAGRAELEALLSGEADGNDCYVEINSGAGG 133 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TES DWA MLLRMY+RWA K E +E G++ GIKSATLL+KG NAYGWLK E GV Sbjct: 134 TESCDWAGMLLRMYSRWANAHKMSVELVEETAGDQVGIKSATLLVKGANAYGWLKTEAGV 193 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISPYD+ ++RHTSF+S WVYPVVDD+IEI+I+ SD R DTYRASGAGGQH+N TD Sbjct: 194 HRLVRISPYDAAAKRHTSFASAWVYPVVDDTIEIDINPSDVRTDTYRASGAGGQHINKTD 253 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+ V CQ RSQH+N+ +AW MLRA+LYE ELQ+RE E KT+IG Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQRREAAQQALEDQKTDIG 313 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGASLAQR 360 >gi|316934390|ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1] gi|315602104|gb|ADU44639.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1] Length = 376 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 217/353 (61%), Positives = 273/353 (77%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L D D + RL+ LN EDP+LW + +A+ LM+ER L++A++ I + Sbjct: 11 EIKQSVGLLRRHLDVDQSTVRLAELNKLAEDPNLWNDPQKAQKLMQERTSLEDALTGIGK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L DN+ ++EL E D I++E + L+ +K EV ++ E+LLSGEAD D YLEV Sbjct: 71 VERELTDNIDMIELGEAEGDEGIVKEAEEALKALKKEVARRELEALLSGEADRFDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMY RWAEK FK E LE DGEEAGIKSAT+ I G NAYGWL Sbjct: 131 HAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESDGEEAGIKSATIQISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+DDSI+I+I ESD R DT R+ GAGGQ Sbjct: 191 KTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKESDVRTDTMRSGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LYE+EL+KREE A ++ Sbjct: 251 HVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+FM ATLA + Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLAQR 363 >gi|221198422|ref|ZP_03571468.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2M] gi|221208901|ref|ZP_03581898.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2] gi|221214768|ref|ZP_03587737.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD1] gi|221165307|gb|EED97784.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD1] gi|221171184|gb|EEE03634.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2] gi|221182354|gb|EEE14755.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2M] Length = 367 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 180/352 (51%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L + L G +D RL+ +N + EDP++W + A+ L RE++ L+ ++ + Sbjct: 14 LDLRTRAGELRGYLCYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLT 73 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+ + L D L L ELA EE D L + ++ +++ V +F + S AD N+ +++ Sbjct: 74 ELDNDLRDALDLFELAREEGDEDTLIASEEDAAKLEARVADIEFRRMFSNPADPNNCFID 133 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+ Sbjct: 134 IQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGY 193 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGG Sbjct: 194 LRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ + E Sbjct: 254 QHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAELRKRQAEQDKLE 313 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 314 SSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEMSNTKAVLDGDLDDFISASLK 364 >gi|254510235|ref|ZP_05122302.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11] gi|221533946|gb|EEE36934.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11] Length = 375 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 200/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L D++ A+ RL N + EDP+LW N A+ LMRERQ L +AI + Sbjct: 11 EIEKSLELLAQRMDYETALHRLEEFNARVEDPNLWDNPENAQKLMRERQMLVDAIETYES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++Q+ D +Q+++ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKTDLSDNIELIELGEMEEDGEVVQDAEDAIQKLRAKSAKKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ + E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYTVELQSETAGEEAGIKSAAYKITGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV E+SQH+N+ A L+++LY+ EL +R N Sbjct: 251 HVNTTDSAVRITHLPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMAATLAL 361 >gi|91775149|ref|YP_544905.1| peptide chain release factor 2 [Methylobacillus flagellatus KT] gi|91709136|gb|ABE49064.1| bacterial peptide chain release factor 2 (bRF-2) [Methylobacillus flagellatus KT] Length = 354 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 181/352 (51%), Positives = 246/352 (69%), Gaps = 1/352 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M L GG+FD+D QRL ++ EDP++W + ++ L +ER+ L+ ++ + Sbjct: 1 MILRSATRPYGGIFDFDTKQQRLEEVSQLLEDPNIWNDNERSQKLGKERRELEFVVNSLT 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+++ + D+ L E+A EE+D L+ + Q ++ V +F + S D N+ +L+ Sbjct: 61 EVENGVRDSRELFEMAREENDDDTLRSIDADTQALEKIVAEMEFRRMFSHPMDQNNCFLD 120 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG+GGTE+QDWA+MLLRMY R+ E + FK E LE +G+ AGIKSA+L I G AYG+ Sbjct: 121 IQAGSGGTEAQDWASMLLRMYLRYCENKGFKVEVLEESEGDVAGIKSASLKISGDYAYGF 180 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHRLVR SP+DS +RRHTSF+S++VYP VDDSI +EI+ +D RIDTYRASGAGG Sbjct: 181 LRTESGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIVVEINPADLRIDTYRASGAGG 240 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N TDSAVRITH+PT VVQCQ +RSQH+NK +A NML+A+LY LEL+KR E E Sbjct: 241 QHINKTDSAVRITHLPTNTVVQCQNDRSQHRNKDEAMNMLKAQLYALELRKRNEEKQAME 300 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KT+IGWG QIRSYVL +KDLRTN+E + VLDGDLD F+ +L Sbjct: 301 DAKTDIGWGHQIRSYVL-DQSRIKDLRTNVEVGNTQGVLDGDLDPFISESLK 351 >gi|261855042|ref|YP_003262325.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2] gi|261835511|gb|ACX95278.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2] Length = 365 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 175/350 (50%), Positives = 245/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL ++ + E P +W + A+ L +ER L+ + + + Sbjct: 14 LSARAAALRGYLDFDVKKERLEEVDRELEVPDVWNDPARAQALGKERASLERVVHTLANM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN LLE+A EEDD + + ++ + ++ +F + SGE D ++AYL++ Sbjct: 74 AQGLNDNADLLEMAAEEDDEATVASIEKDVVEFEKQIADLEFRRMFSGEMDESNAYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA++L+RMY RW ++R FKTE +E+ DGE AGIKSAT+ +G A+GWL+ Sbjct: 134 SGAGGTESQDWASILMRMYLRWGDRRGFKTEVMEMSDGEVAGIKSATIRFEGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEIE++ +D R+D +RASGAGGQH Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFASVFVSPEVDDNIEIEVNPADLRVDVFRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVR TH+PTGVVV CQ ERSQ +N+ +A ML+AKLYELE+QKR ++ E + Sbjct: 254 VNRTESAVRFTHLPTGVVVACQAERSQIQNRERAMKMLKAKLYELEVQKRNAVSQALEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++ WG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 314 KSDVSWGNQIRSYVL-DQSRIKDLRTGHETGNTQAVLDGDLDPFIEASLK 362 >gi|226314892|ref|YP_002774788.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599] gi|226097842|dbj|BAH46284.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599] Length = 370 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 163/352 (46%), Positives = 235/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++L + G D +R+ L + P W + A+ + E + + + + ++ Sbjct: 16 MAKRLADIRGSLDLPVKQERIGELEERMLAPDFWDDNDAAQKTISELNAIKSLVETMAKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D ++LEL +EE D S++ + D+ Q ++ E + E LLS E D N+A LE+H Sbjct: 76 DSQYEDLQVMLELVIEEGDSSLIPDLYDSTQELRKSFESFELELLLSDEYDKNNAILELH 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRW + + FK E L+ G+EAG+KS TLLIKG NAYG+LK Sbjct: 136 PGAGGTESQDWASMLLRMYTRWGDAKGFKVETLDYLPGDEAGVKSVTLLIKGYNAYGYLK 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D++ RRHTSF S V P ++D ++I D ++DTYR+SGAGGQH Sbjct: 196 SEKGVHRLVRISPFDASGRRHTSFVSCNVLPEIEDDNVVDIRTEDLKVDTYRSSGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+P+G+VV CQ ERSQ KN+ +A ML A+L+E + +++E+ + Sbjct: 256 INTTDSAVRITHLPSGIVVTCQTERSQIKNRERAMKMLTARLFEKKREEQEKTLAAIQGE 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L + Sbjct: 316 QKDIAWGSQIRSYVFHPYSLVKDHRTNMEVGNVQAVMDGEIDSFIDAYLRAQ 367 >gi|302385044|ref|YP_003820866.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1] gi|302195672|gb|ADL03243.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1] Length = 377 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 172/350 (49%), Positives = 239/350 (68%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + L + D DN ++R+ L+ E+P W++ ++ +++ ++L + + +E++ Sbjct: 15 EKPLVEVRDSLDLDNKLKRIDELDKSMEEPGFWEDPEKSAKIVQLAKNLKDTVQSYQELE 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +++E+ EE+D S++ E + L+ K +E + +LLSGE DS++A L ++A Sbjct: 75 RQYEDIGVMIEMGNEENDPSLVPEVEEMLREFKESLESMRINTLLSGEYDSDNAILRLNA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DW ML RM+ RWAEK+ F E L+ DGEEAGIKS T+ I GPNAYG+LK Sbjct: 135 GAGGTESCDWCGMLYRMFCRWAEKKGFSLEVLDYLDGEEAGIKSVTVQINGPNAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++ +R TSF S V P +++ +++EI+E D RIDTYR+SGAGGQH+ Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFVSCDVMPDIEEDLDVEINEEDLRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITH+PTG+VVQCQ ERSQ +NK +A ML+AKLY L+ Q+ E + Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYMLKQQENAEKLSGIRGDV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 TEIGWG QIRSYVLQPY MVKD RTN E + VLDG LD FM A L Sbjct: 315 TEIGWGNQIRSYVLQPYTMVKDHRTNAETGNVGSVLDGSLDQFMYAYLRW 364 >gi|260433401|ref|ZP_05787372.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis ITI-1157] gi|260417229|gb|EEX10488.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis ITI-1157] Length = 375 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 198/352 (56%), Positives = 253/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L D++ A RL N + EDP+LW N A+ LMRERQ L +AI + Sbjct: 11 EIQKSLELLAQRMDYETAAHRLEEFNARVEDPNLWDNPENAQKLMRERQVLVDAIETYES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D ++++ + L++++ + K+ E+LL GEAD+ND +LE+ Sbjct: 71 IKTDLKDNVELIELGEMEGDEEVVKDAEEALKKLRDKAAEKELEALLDGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETPGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ +D R+DTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRVDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAEINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT E + VLDGDL FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTKGVLDGDLGGFMAATLAM 361 >gi|291613970|ref|YP_003524127.1| hypothetical protein Slit_1503 [Sideroxydans lithotrophicus ES-1] gi|291584082|gb|ADE11740.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1] Length = 367 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 177/350 (50%), Positives = 249/350 (71%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + N L D+D+ +RL+ +N EDP +W + A+ L RER+ L++ + + I Sbjct: 16 LRNRSNELRRFLDFDSKQERLAEVNQLAEDPAIWNDAKRAQELGRERKSLEDVVLGLIRI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D L E+A E+D L + ++Q I+ V +F + S AD N+ ++++ Sbjct: 76 SQNLDDAAELFEMAQAENDDDSLNSIAADVQDIETRVAALEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE DG+ AGI+SA+L ++G AYG L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKVEVLEQTDGDVAGIRSASLKVEGEYAYGHLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++V P VDDSIE++I+ +D RIDT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVSPEVDDSIEVDINPADLRIDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSA+RITH PTG+VVQCQ +RSQH+NKA+A +ML+++LYELEL+KR+ A+ E+S Sbjct: 256 INKTDSAIRITHQPTGIVVQCQNDRSQHRNKAEAMSMLKSRLYELELRKRQSEADKLEAS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIEASLK 364 >gi|33151768|ref|NP_873121.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP] gi|33147989|gb|AAP95510.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP] Length = 351 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ I + + Sbjct: 5 SSFGGIFDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINALIQGIE 64 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L+ELA+E +D L E + ++ +F+ + SG D+ D YL++ AG+GG Sbjct: 65 DVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQAGSGG 124 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+ Sbjct: 125 TEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLRTETGI 184 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQHVN T+ Sbjct: 185 HRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQHVNKTE 244 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+G+VVQCQ RSQH+NK Q LRAKLYE+E+ K+ E +K++IG Sbjct: 245 SAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEENKSDIG 304 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 305 WGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349 >gi|117924338|ref|YP_864955.1| peptide chain release factor 2 [Magnetococcus sp. MC-1] gi|117608094|gb|ABK43549.1| bacterial peptide chain release factor 2 (bRF-2) [Magnetococcus sp. MC-1] Length = 379 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 182/352 (51%), Positives = 249/352 (70%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +L L G +++ +RLS L + +DP+LW + A+ +M E+ L+ I + Sbjct: 20 IGEKLTLLRGHLNYEQGKERLSELESLAQDPNLWGDSERARTVMTEKNRLEKTIGEWDAL 79 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D LLE+A EE D ++ E + + I +E + +LSGEAD+N+ ++E+H Sbjct: 80 NSESTDARDLLEMAQEEGDSGMIAEVTAQVAAILKRLEGLELARMLSGEADANNCFIEIH 139 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++LLRMY R+ EK FKTE ++ G+EAGIKS T+ ++G AYG+LK Sbjct: 140 PGAGGTESQDWASILLRMYLRYCEKSGFKTEEVDYLAGDEAGIKSVTIKVEGDYAYGYLK 199 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS++RRHTSF+S+ VYP +DDSIEIEI + D R+DT+RASGAGGQH Sbjct: 200 VESGVHRLVRISPFDSSARRHTSFTSVNVYPEIDDSIEIEILDKDLRVDTFRASGAGGQH 259 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH PTG+VVQCQ RSQH+N+ +A MLRA+L++LE+ KR E A + Sbjct: 260 VNKTDSAIRITHQPTGIVVQCQSGRSQHRNRDEAMKMLRARLFQLEMDKRAEAAQAVADA 319 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++I WG QIRSYVL PY++VKDLRT+ E + VLDG+LD F+KA L+ + Sbjct: 320 KSDIAWGHQIRSYVLAPYRLVKDLRTSYETGNTDAVLDGELDGFIKAALSQR 371 >gi|319783261|ref|YP_004142737.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169149|gb|ADV12687.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 376 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 233/353 (66%), Positives = 290/353 (82%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L FDWD A++RL +LN + ED LW +EA+ LMRERQ L+ I+ +K Sbjct: 11 EIRQAITLLRRHFDWDQAIKRLEYLNVRAEDASLWNEPLEAQKLMRERQSLEEGIASVKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L DN+ L+EL EE D ++ E ++ ++ E + +Q E+LLSGEADSND YLE+ Sbjct: 71 LTQALEDNIGLIELGEEERDEGVIAEAEAAIRSMQGEAKARQVETLLSGEADSNDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMYTRWAE+R+FK E LE+HDGEEAGIKSATL+IKG NAYGW+ Sbjct: 131 HAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEMHDGEEAGIKSATLMIKGHNAYGWM 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD+IEI++SESD RIDTYR+SG+GGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+ TG+ V CQ ERSQHKNKA+AW MLR++LYE EL+KRE +AN E+ Sbjct: 251 HVNTTDSAVRITHLATGIAVACQAERSQHKNKAKAWEMLRSRLYEEELKKREAVANATEA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SK++IGWG QIRSYVLQPYQ+VKDLRT +E TSPS VLDGDLDDFM+A+L+ + Sbjct: 311 SKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDDFMEASLSQR 363 >gi|186476207|ref|YP_001857677.1| peptide chain release factor 2 [Burkholderia phymatum STM815] gi|184192666|gb|ACC70631.1| peptide chain release factor 2 [Burkholderia phymatum STM815] Length = 359 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 171/342 (50%), Positives = 248/342 (72%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D RL +N + EDP++W + A+ L +E++ L+ + + + + L D Sbjct: 16 GGIFDYDAKSVRLIEVNKELEDPNVWNDSQHAQALGKEKKLLEGVVDVLSSLDNDLRDTK 75 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ++A EE+D L +++ ++ VE +F + S AD N+A++++ AGAGGTE+ Sbjct: 76 DLFDMAREENDEDTLVACEEDVAKLTTRVEDMEFRRMFSNPADPNNAFIDIQAGAGGTEA 135 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y R+ E++ FKTE LE +G+ AGIKSAT+ ++G AYG+L+ E G+HRL Sbjct: 136 CDWASMLLRQYLRYCERKGFKTEVLEESEGDVAGIKSATIKVEGEYAYGFLRTETGIHRL 195 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSFSS++VYP +D+S EIE++ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 196 VRKSPFDSSGGRHTSFSSVFVYPEIDESFEIEVNPADLRIDTYRASGAGGQHINKTDSAV 255 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIP+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ K+++GWG Sbjct: 256 RITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQSEQDKLEAGKSDVGWGH 315 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 316 QIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDAFISASLK 356 >gi|152985089|ref|YP_001346821.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7] gi|150960247|gb|ABR82272.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7] Length = 382 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 183/343 (53%), Positives = 246/343 (71%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL +N + EDP++W N A+ L RER L + + ++ L D+ Sbjct: 38 FGGIFDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADS 97 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL++A+EE D + + + ++R++ +E +F + SGE D N+AYL++ AG+GGTE Sbjct: 98 RDLLDMAVEEGDEGAVGDVAGEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTE 157 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY RWA+K F +E+ +GE AGIK AT+ +KG A+GWL+ E GVHR Sbjct: 158 AQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHVKGEYAFGWLRTEIGVHR 217 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSA Sbjct: 218 LVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSA 277 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VV CQ ERSQH NK A MLRAKLYE E+QKR + E +K++IGWG Sbjct: 278 VRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYEQEMQKRTAASQALEDTKSDIGWG 337 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT IE++ VLDGDLD++++A+L Sbjct: 338 HQIRSYVL-DQSRIKDLRTGIERSDCDKVLDGDLDEYLEASLK 379 >gi|316940875|gb|ADU74909.1| Peptide chain release factor 2 [Clostridium thermocellum DSM 1313] Length = 375 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 166/349 (47%), Positives = 234/349 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + L+ +G D + ++ L K +P W + ++ ++++ + L + + ++ Sbjct: 15 KQNLDEMGKSLDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLV 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D + L EL +EE D S++ E + + K E E + E+LL+G+ D N+A L +HA Sbjct: 75 SQWEDLITLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDW ML RMYTRWAEK+ F + L+ DGEEAGIKS T + G NAYG+LK Sbjct: 135 GAGGTEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D++ RRHTSF+S+ V P ++D IE+ I+ D RIDTYR+SGAGGQH+ Sbjct: 195 EKGVHRLVRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+VV CQ ERSQ +NK A ML+AKL EL+ ++ +E + + Sbjct: 255 NKTESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 EI WG QIRSYV PY +VKD RTN E+ + V+DG+LD F+ + L+ Sbjct: 315 LEIAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 363 >gi|71153099|sp|Q7VNG1|RF2_HAEDU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 365 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + G D+D V+RL +N + E P +W +A+ L +ER L+ ++ I + Sbjct: 14 LTERTQLIRGYLDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINAL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+ELA+E +D L E + ++ +F+ + SG D+ D YL++ Sbjct: 74 IQGIEDVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+P+G+VVQCQ RSQH+NK Q LRAKLYE+E+ K+ E + Sbjct: 254 VNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEEN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363 >gi|330447415|ref|ZP_08311064.1| peptide chain release factor 2 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491606|dbj|GAA05561.1| peptide chain release factor 2 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 347 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 177/344 (51%), Positives = 239/344 (69%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG FD+D +RL +N + E P +W A+ L +ER L+ + I ++ + D Sbjct: 2 SLGGTFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVED 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+EE+D E L ++ ++ +F + +G+ D +D Y+++ AG+GGT Sbjct: 62 VEGLLELAVEEEDQETFDEIEPELAELEEKLAKLEFRRMFAGDHDPSDCYVDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ + G AYGWL+ E GVH Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRVSGEYAYGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+S Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEIDDNIAIDINPSDLRIDVYRASGAGGQHVNTTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E ELQK+ E SK++IGW Sbjct: 242 AVRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFELQKQNAEKQANEDSKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 344 >gi|163747048|ref|ZP_02154404.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45] gi|161379609|gb|EDQ04022.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45] Length = 374 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++S+ L L D D A RL N + EDP+LW N A+ LMRERQ L +AI + Sbjct: 11 QISKSLELLAQRLDVDTAPYRLEEFNARVEDPNLWDNPDAAQKLMRERQSLVDAIDTYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D +++E L+ + K+ E+LL+GEADSND +LE+ Sbjct: 71 IKQELADNVELIELGEMEGDEEVIKEAEVALKSLAATAAQKELEALLNGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ +K + GEEAGIKSAT I+G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVDLQAESAGEEAGIKSATYKIEGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M ATLA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGATLAL 361 >gi|73540774|ref|YP_295294.1| peptide chain release factor 2 [Ralstonia eutropha JMP134] gi|72118187|gb|AAZ60450.1| bacterial peptide chain release factor 2 (bRF-2) [Ralstonia eutropha JMP134] Length = 357 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 176/345 (51%), Positives = 248/345 (71%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D V RL +N EDP +W N A+ L +E++ L+ +S + ++ D L Sbjct: 11 KIYGGIFDYDVKVGRLEEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVSVLGKLTDDLN 70 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L ELA EE D L+ +++ + V +F + +GE D +A++++ AGAGG Sbjct: 71 GADELFELAKEEGDDETLESIETDVKGFEEIVAGMEFRRMFAGEMDQANAFIDIQAGAGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ I+G A+G+L+ E GV Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++G Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 311 WGHQIRSYVL-DQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLK 354 >gi|15642771|ref|NP_230312.1| peptide chain release factor 2 [Vibrio cholerae O1 biovar El Tor str. N16961] Length = 365 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 183/349 (52%), Positives = 242/349 (69%), Gaps = 1/349 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S + N L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 15 SERTNILRGYLDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLD 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D LLELA+E +D E L ++ ++E +F + SG+ DS+D YL++ A Sbjct: 75 RGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ Sbjct: 135 GSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRT 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHV Sbjct: 195 ETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K Sbjct: 255 NTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAK 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 ++IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 315 SDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 362 >gi|313895325|ref|ZP_07828882.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str. F0430] gi|312976220|gb|EFR41678.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str. F0430] Length = 368 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 234/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ + + ++++ L K +P W + A+ + +E L + K + Sbjct: 12 LGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ +EE+D S+ ++ L I +E Q E LLSGE D+N+A L +H Sbjct: 72 AAKYEDAETLYEMGIEENDPSMERDIRAELDLIAEGLETLQLEVLLSGEYDANNAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSA+L IKG NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSASLFIKGHNAYGFLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS +RRHTSFS+ V P +DD++E++I D R+D YRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGV 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RTN E + V+DG++D F++A L K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363 >gi|83951928|ref|ZP_00960660.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM] gi|83836934|gb|EAP76231.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM] Length = 375 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 202/352 (57%), Positives = 250/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L DWD A RL N + EDP+LW + +A+ LMRERQ L +AI Sbjct: 11 EIEKSLELLRQRMDWDTAKHRLEEFNARVEDPNLWDDPAKAQKLMRERQSLVDAIDTHDA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + DN+ L+EL E D ++ E L+ +K + K+ E+LL+GEAD+ND +LE+ Sbjct: 71 INQEMSDNIELIELGEMEGDNEVIGEAESALKSLKEKAGAKELEALLNGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEKR + E GEEAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD IEIE++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDDIEIEVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAM 361 >gi|326794289|ref|YP_004312109.1| peptide chain release factor 2 [Marinomonas mediterranea MMB-1] gi|326545053|gb|ADZ90273.1| Peptide chain release factor 2 [Marinomonas mediterranea MMB-1] Length = 364 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 178/350 (50%), Positives = 244/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL ++ + EDP +W + A+ L +ER L+ + + + Sbjct: 13 LSERSQILRGYLDYDAKKERLEEVSRELEDPEIWNDPEYAQKLGKERSTLEAVVETLDNL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D+ LL++A+EEDD ++ L + ++ +F + SGE D+N A+L++ Sbjct: 73 ESGVEDSKDLLDMAVEEDDADSVEAVELELNDLDEQLAKLEFRRMFSGEMDANSAFLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWANMLLRMY RW E + FK E +E+ +GE AGIKSAT+ +G A+GWL+ Sbjct: 133 SGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSEGEVAGIKSATVRFEGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S+++ P +DD++EI+I+ +D RIDTYR+SGAGGQH Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFASVFLSPEIDDNVEIDINPADLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VVQCQ +RSQH NK A LRAKLYELE+ KR E A E + Sbjct: 253 VNTTDSAVRITHVPTNTVVQCQNQRSQHANKDFAMKQLRAKLYELEMLKRTEAAQALEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E T+ VLDG LD F+ A+L Sbjct: 313 KSDIGWGSQIRSYVL-DSSRIKDLRTGVESTNTGSVLDGSLDQFIVASLK 361 >gi|119897788|ref|YP_933001.1| peptide chain release factor 2 [Azoarcus sp. BH72] gi|119670201|emb|CAL94114.1| peptide chain release factor [Azoarcus sp. BH72] Length = 373 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 174/346 (50%), Positives = 237/346 (68%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D +L +N EDP +W + A+ L +E++ L+ + +++I+ + Sbjct: 26 VANSGGIFDYDEKSSKLEEVNRALEDPAVWNDAARAQELGKEKRQLEGVVLTLQQIEQQS 85 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L +LA E D + +L ++ V +F + S D N ++E+ AGAG Sbjct: 86 ADLKDLFDLADMEGDDDTFEAVEGDLVGLEALVGQLEFRRMFSNPMDPNACFIEIQAGAG 145 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML RMY R+ EK+ F E +E +GE AGIK+ T+ G AYG+L+ E G Sbjct: 146 GTEAQDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFTGDYAYGFLRTETG 205 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH+N T Sbjct: 206 IHRLVRKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQHINKT 265 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH PTG+VVQCQ +RSQH+NK +A +ML+A+LYELEL+KR+ E +K++I Sbjct: 266 DSAVRITHQPTGIVVQCQNDRSQHRNKDEAMSMLKARLYELELRKRQAEQQKLEDAKSDI 325 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT E + VLDGDL+DF+ A+L Sbjct: 326 GWGHQIRSYVL-DQSRIKDLRTGYEVGNTQAVLDGDLEDFIAASLK 370 >gi|320530290|ref|ZP_08031358.1| peptide chain release factor 2 [Selenomonas artemidis F0399] gi|320137433|gb|EFW29347.1| peptide chain release factor 2 [Selenomonas artemidis F0399] Length = 368 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 173/352 (49%), Positives = 233/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ + + ++++ L K +P W + A+ + +E L + K + Sbjct: 12 LGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ +EE+D ++ + L I +E Q E LLSGE D+N+A L +H Sbjct: 72 AAKYEDAETLYEMGIEENDPTMEGDIRAELDAIAEGLETLQLEVLLSGEYDANNAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSA+L IKG NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFSVETADLQPGDEAGVKSASLFIKGHNAYGFLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS +RRHTSFS+ V P +DD++E++I D R+D YRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGV 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RTN E + V+DG++D F++A L K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363 >gi|302383300|ref|YP_003819123.1| hypothetical protein Bresu_2190 [Brevundimonas subvibrioides ATCC 15264] gi|302193928|gb|ADL01500.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC 15264] Length = 373 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 201/352 (57%), Positives = 254/352 (72%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L DWD A ++L LN + EDP LW + A+ + RER L I + E+ Sbjct: 12 IEQSVALLRRRLDWDVANRKLDELNARVEDPTLWNDPDAAQAVSRERSRLKTQIDTVLEM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L + ++L ++A EE D + L+E L+ IK + E+LLSGEAD NDAYLEV+ Sbjct: 72 ESGLEEGVMLADMADEEGDEATLEEARAALKAIKDRASRAELEALLSGEADGNDAYLEVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA MLLRMY+RWA+ ++ + DG++AGIKSAT+L+ GPNAYGWLK Sbjct: 132 SGAGGTESCDWAGMLLRMYSRWAKAHGYEVQIEASEDGDQAGIKSATILVTGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYD+ ++RHTSF+S+ V PVVDD+IEI+I+ +D R DTYRASG+GGQH Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFASVGVSPVVDDTIEIDINPADVRTDTYRASGSGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPT VV CQ RSQH+N+ QAW MLR +LYELELQKRE A + Sbjct: 252 INKTDSAVRLTHIPTNTVVACQAGRSQHQNREQAWKMLRGRLYELELQKREAAAQALADA 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM A LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAAR 363 >gi|94309981|ref|YP_583191.1| peptide chain release factor 2 [Cupriavidus metallidurans CH34] gi|93353833|gb|ABF07922.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34] Length = 357 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 174/345 (50%), Positives = 246/345 (71%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D V RL +N EDP +W N A+ L +E++ L+ + + ++ D L Sbjct: 11 KIYGGIFDYDVKVNRLDEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVQVLGKLTDDLN 70 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L ELA EE D L+ ++ + V +F + SGE D +A++++ AGAGG Sbjct: 71 GTDELFELAREEGDDETLESIEADVSGFEALVADMEFRRMFSGEMDQANAFIDIQAGAGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ ++G A+G+L+ E GV Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKVEGEYAFGYLRTETGV 190 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++G Sbjct: 251 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 311 WGHQIRSYVL-DQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLK 354 >gi|110680026|ref|YP_683033.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114] gi|123361814|sp|Q165J6|RF2_ROSDO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|109456142|gb|ABG32347.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114] Length = 374 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 201/353 (56%), Positives = 254/353 (71%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ L D + A RL N + EDP LW + A+ LMRERQ L +A++ Sbjct: 11 KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRERQMLVDAMATHDS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + DN+ L+EL EDD ++ + + L+ ++ K+ E+LL GEADSND +LEV Sbjct: 71 IKQEMADNIELIELGEMEDDADVVSDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEK+ +K E + DG+EAGIKSAT I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+IE++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLALD 362 >gi|54307774|ref|YP_128794.1| putative peptide chain release factor 2 [Photobacterium profundum SS9] gi|46912197|emb|CAG18992.1| putative peptide chain release factor 2 [Photobacterium profundum SS9] Length = 353 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 179/346 (51%), Positives = 239/346 (69%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L LGG FD+D ++L +N + E P +W A+ L + R L+ + I ++ + Sbjct: 6 LTSLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EEDD E L ++ ++ +F + SGE DS+D Y+++ AG+G Sbjct: 66 EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW +M+LRMY RWA+ + FKTE +E+ G+ AG+KSAT+ + G AYGWL+ E G Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E SK++I Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKKNAEKQANEDSKSDI 305 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 GWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350 >gi|114331309|ref|YP_747531.1| peptide chain release factor 2 [Nitrosomonas eutropha C91] gi|114308323|gb|ABI59566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosomonas eutropha C91] Length = 348 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 178/346 (51%), Positives = 242/346 (69%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D RL+ L ++EDP +W + A+ L RE++ L+N + ++ I +L Sbjct: 1 MKFYGGIFDFDAKQVRLTELERQSEDPAIWNDPARAQELGREKKSLENIVFTLRSIDRQL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LL++A EE D L S+++ + VE +F + S D N+ ++++ +G+G Sbjct: 61 QDAQELLQIAQEESDDETLHSISEDVAGLAKTVEEMEFHRMFSDPMDPNNCFIDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+ML RMY + E+R E LE G+ AGIKSAT+ + G AYG+L+ E G Sbjct: 121 GTEAQDWASMLERMYLHYCERRGLAVELLEESPGDVAGIKSATIKVSGEYAYGYLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N T Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTYRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+VVQCQ RSQH+N+A A +L+++LYE EL+KR E E SKT+I Sbjct: 241 DSAVRITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTNIE + VLDGDLD F++A+L Sbjct: 301 AWGHQIRSYVL-DQSRIKDLRTNIEVGNTQAVLDGDLDVFIEASLK 345 >gi|296134253|ref|YP_003641500.1| hypothetical protein TherJR_2767 [Thermincola sp. JR] gi|296032831|gb|ADG83599.1| hypothetical protein TherJR_2767 [Thermincola potens JR] Length = 371 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 172/355 (48%), Positives = 242/355 (68%), Gaps = 1/355 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L+ +L L D V+ ++ L KT + W N +EA+ +MRE L + I Sbjct: 10 IELAERLEELRVSLDIAGKVRAVNALEEKTAEQGFWDNPVEAQKVMREINDLKDTIGLYN 69 Query: 61 EIQDRLCDNLILLELALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 ++ + D L EL +E+DD I +E + +++ ++ VE + LL + D +A + Sbjct: 70 TLKRQYDDVYTLWELGMEDDDPDEIEKEVARDIRHLRHNVEQAELTLLLGDKYDKGNAII 129 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 +HAGAGGTE+QDW MLLRMYTRWAE++ +K + L++ G+EAGIKSA++ I+GP AYG Sbjct: 130 SLHAGAGGTEAQDWVQMLLRMYTRWAEEKGYKIDTLDLLPGDEAGIKSASISIEGPYAYG 189 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E+GVHRLVRISP+D++ RRHTSF+S+ V P VDD EI I +D RIDT+R+ GAG Sbjct: 190 YLKSEKGVHRLVRISPFDASGRRHTSFASVDVLPEVDDETEIVIDPADLRIDTFRSGGAG 249 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN TDSAVRITHIPTG+VVQCQ ERSQH N+ +A +L+A+L +LE++K+EE N Sbjct: 250 GQHVNKTDSAVRITHIPTGIVVQCQNERSQHSNRLKAMKLLQARLLDLEIKKKEEELNKL 309 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIRSYV PY +VKD RT +E + V+DG++D+F+ A L + Sbjct: 310 RGEQQEIAWGSQIRSYVFHPYSLVKDHRTGVETGNVQAVMDGEIDEFIAAYLKSR 364 >gi|296136248|ref|YP_003643490.1| hypothetical protein Tint_1790 [Thiomonas intermedia K12] gi|295796370|gb|ADG31160.1| conserved hypothetical protein [Thiomonas intermedia K12] Length = 367 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 246/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L G D+D RL + EDP +W + A+ L RER+ L+ + ++ + Sbjct: 16 LQQRVQALRGYLDFDAKASRLMEVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D+ L E++ EE D + + ++++ EVE +F + S D ++ ++++ Sbjct: 76 TTALADHSELFEMSREEGDDATCEAIEADVEKSAAEVEALEFRRMFSNPLDPSNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FKTE +E +G+ AGI+SAT+ ++G AYG L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP VDDSIEI+I+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDDSIEIDINPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+TH+PTG+VVQCQ +RSQHKN+A+AW MLR++LYE E++KR ES+ Sbjct: 256 INKTDSAVRLTHMPTGIVVQCQNDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLEST 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD+F+ A+L Sbjct: 316 KSDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDEFITASLK 364 >gi|90413184|ref|ZP_01221180.1| putative peptide chain release factor 2 [Photobacterium profundum 3TCK] gi|90325875|gb|EAS42327.1| putative peptide chain release factor 2 [Photobacterium profundum 3TCK] Length = 353 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 179/346 (51%), Positives = 239/346 (69%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L LGG FD+D ++L +N + E P +W A+ L + R L+ + I ++ + Sbjct: 6 LTFLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EEDD E L ++ ++ +F + SGE DS+D Y+++ AG+G Sbjct: 66 EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW +M+LRMY RWA+ + FKTE +E+ G+ AG+KSAT+ + G AYGWL+ E G Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E SK++I Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKQNAEKQANEDSKSDI 305 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 GWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350 >gi|20663625|pdb|1GQE|A Chain A, Polypeptide Chain Release Factor 2 (Rf2) From Escherichia Coli Length = 365 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 182/351 (51%), Positives = 232/351 (66%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + + Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQX 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRXFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ L R Y RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA +AKLYE+E QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAXKQXKAKLYEVEXQKKNAEKQAXEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|289208167|ref|YP_003460233.1| hypothetical protein TK90_0982 [Thioalkalivibrio sp. K90mix] gi|288943798|gb|ADC71497.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix] Length = 364 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 180/350 (51%), Positives = 243/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L LGG+FD+ +RL + + E+P +W + A+ L +ER L+N + I+EI Sbjct: 13 LKAAWKALGGIFDYPVKEERLEEVQRELENPDIWNDPDRAQALGKERAQLENIVVNIREI 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +L D+ LLE+A +DD +++ + VE +F + SG+ D +AYL++ Sbjct: 73 GTQLDDSRDLLEMAEADDDAETASAVEADVEALTARVEALEFRRMFSGDMDEANAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWAE FKTE +E+ +GE AGIKSAT+ I+G A+GWL+ Sbjct: 133 AGSGGTEAQDWANILLRMYLRWAEAHGFKTEIIELSEGEVAGIKSATVRIEGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++ P VDDS EIEI+ +D R+DTYRASGAGGQH Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFASVFASPEVDDSFEIEINPADLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH P+G+VV CQ +RSQHKN+ A L+AKLYE+E+QKR E + Sbjct: 253 VNRTESAIRITHEPSGIVVACQNDRSQHKNRDTAMKQLKAKLYEMEIQKRNAEKQAAEDA 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 KSDIGWGSQIRSYVL-DQSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLK 361 >gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118] gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius UCC118] gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 355 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 167/347 (48%), Positives = 232/347 (66%), Gaps = 1/347 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD D ++++ + +P W + +A+ ++ E L E+ + + D Sbjct: 2 NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61 Query: 69 NLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + LEL E DD + + +N Q + ++ Q LLS + D N+A LE+H GAGG Sbjct: 62 LGVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDW +MLLRMYTRWA + FK E ++ G++AGIKS TL+I+G NAYG+L+ E+GV Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DS RRHTSF+S+ V P +DDS+E+E+ D +++ +RASGAGGQH+N T Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ HIPTG+VV Q +RSQ +N+A A NMLRAKLY+LE++++E+ + + +IG Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIG 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L K Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348 >gi|87200328|ref|YP_497585.1| peptide chain release factor 2 [Novosphingobium aromaticivorans DSM 12444] gi|87136009|gb|ABD26751.1| bacterial peptide chain release factor 2 (bRF-2) [Novosphingobium aromaticivorans DSM 12444] Length = 375 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 204/353 (57%), Positives = 262/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DWD AV+RL LN + EDP LW + +A+ +MRER+ L+ +I + + Sbjct: 11 RIEAALALVRKFLDWDRAVRRLDELNARVEDPKLWDDPKKAEEVMRERRRLEASIGTVNQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +EL E D + E L + + + ++LL+GEAD+N+A+LEV Sbjct: 71 IGQEMADAIEFVELGEMEGDEDTINEGLATLAALAERADNDKVQALLAGEADANNAFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMYTRWAE+ +K E ++ H GE AGIKSATLLIKG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKSATLLIKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+IE+EI+ +D +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIEVEINPADLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG++V Q +RSQHKN+A A ML+A++YE EL KRE A+ + Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLKARIYEAELAKREAAASGEYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ VKDLRT + T+P++VLDG LD FM A L+ + Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALSQR 363 >gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius CECT 5713] Length = 355 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 167/347 (48%), Positives = 232/347 (66%), Gaps = 1/347 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD D ++++ + +P W + +A+ ++ E L E+ + + D Sbjct: 2 NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61 Query: 69 NLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + LEL E DD + + +N Q + ++ Q LLS + D N+A LE+H GAGG Sbjct: 62 LEVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDW +MLLRMYTRWA + FK E ++ G++AGIKS TL+I+G NAYG+L+ E+GV Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DS RRHTSF+S+ V P +DDS+E+E+ D +++ +RASGAGGQH+N T Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ HIPTG+VV Q +RSQ +N+A A NMLRAKLY+LE++++E+ + + +IG Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIG 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L K Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348 >gi|119384552|ref|YP_915608.1| peptide chain release factor 2 [Paracoccus denitrificans PD1222] gi|119374319|gb|ABL69912.1| bacterial peptide chain release factor 2 (bRF-2) [Paracoccus denitrificans PD1222] Length = 402 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 199/352 (56%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L LG DW+ A RL LN E +W + A+ LMR+RQ L +A+ + I Sbjct: 39 IRKSLKLLGQRMDWETAPHRLEELNAMIEAGDIWSDQARAQKLMRDRQMLSDAVETYRRI 98 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN L+EL E D I+ + L+ + K+ E+LL+GEAD ND +LE++ Sbjct: 99 ESELKDNAELIELGEAEGDDEIVADAEAALKSLAELAAQKELEALLNGEADGNDTFLEIN 158 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ + E L GEEAGI+SA I GPNAYGWLK Sbjct: 159 AGAGGTESADWASMLARMYVRWAEKKGYSVELLSETPGEEAGIRSAAYKISGPNAYGWLK 218 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI I +++ RIDTYR+SGAGGQH Sbjct: 219 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEITIPDNEIRIDTYRSSGAGGQH 278 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV E+SQH+N+A A L+A+LY+LEL KR N + Sbjct: 279 VNTTDSAVRITHLPTGIVVTSS-EKSQHQNRANAMAALKARLYQLELDKRNAAINAQHEA 337 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVL PYQMVKDLRT E + VLDG LD FM ATLA+ Sbjct: 338 KGDAGWGNQIRSYVLHPYQMVKDLRTGHETSDTQGVLDGALDAFMAATLALD 389 >gi|308198348|ref|YP_003933612.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1] gi|307752087|gb|ADN93061.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1] Length = 364 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 187/350 (53%), Positives = 250/350 (71%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + G D+D RL +N + EDP++W N A+ L RER L + + ++ Sbjct: 13 LSERTQTIRGYLDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D+ LL++A+EEDD + + ++ ++R++ +E +F + SGE D N+AYL++ Sbjct: 73 TSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWANMLLRMY RWA+K F +E+ +GE AGIK AT+ IKG A+GWL+ Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQH Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E S Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDS 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT IE++ VLDGDLD++++A+L Sbjct: 313 KSDIGWGHQIRSYVL-DQSRIKDLRTGIERSDCDKVLDGDLDEYLEASLK 361 >gi|172087665|ref|YP_203835.2| peptide chain release factor RF-2 [Vibrio fischeri ES114] gi|229576704|sp|Q5E7P9|RF2_VIBF1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|171902260|gb|AAW84947.2| peptide chain release factor RF-2 [Vibrio fischeri ES114] Length = 365 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 178/349 (51%), Positives = 240/349 (68%), Gaps = 1/349 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S + N L G D+D +RL +N + E P +W A+ L +ER L+ + I + Sbjct: 15 SERTNILRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDLLD 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D LLELA+EE+D E L ++ ++ +F + SG+ D++D Y+++ + Sbjct: 75 QGVEDVDGLLELAVEEEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDASDCYIDLQS 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K AT+ I G AYGWL+ Sbjct: 135 GSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLKGATVRIAGEYAYGWLRT 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ SD RID YRASGAGGQHV Sbjct: 195 ETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPSDLRIDVYRASGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT+SAVRITH+PT +VVQCQ +RSQHKNK QA LRAKL+E ELQK+ E +K Sbjct: 255 NTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFEYELQKQNAEKQANEDAK 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 ++IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 315 SDIGWGSQIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 362 >gi|30249212|ref|NP_841282.1| peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718] gi|30180531|emb|CAD85140.1| Peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718] Length = 347 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 177/342 (51%), Positives = 243/342 (71%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D RL+ L ++EDP +W + A+ + RE++ L+N + ++ + +L D Sbjct: 4 GGIFDFDAKQIRLTELERQSEDPAIWNDPDRAQEMGREKKSLENIVHTLQSVDRQLRDTH 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL++A EE+D LQ +D++ + + +F + S D N+ ++++ +G+GGTE+ Sbjct: 64 ELLQIAQEENDKETLQSIADDVTELDQTLAGMEFRRMFSDPMDPNNCFVDIQSGSGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML RMY R+ E+R E LE G+ AGIKSATL I G AYG+L+ E GVHRL Sbjct: 124 QDWASMLERMYLRYCERRGLGVELLEESPGDVAGIKSATLKISGEYAYGYLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DT+RASGAGGQH+N TDSAV Sbjct: 184 VRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTFRASGAGGQHINKTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+VVQCQ RSQH+N+A A +L+++LYE EL+KR E E SKT+I WG Sbjct: 244 RITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDIAWGH 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTNIE + VLDGDLD F++A+L Sbjct: 304 QIRSYVL-DQSRIKDLRTNIEIGNTQAVLDGDLDTFIEASLK 344 >gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1 BON] gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1 BON] Length = 353 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 168/341 (49%), Positives = 231/341 (67%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + + L + DP W ++ ++ + + + L + + ++ ++ + D L Sbjct: 6 LFDPAGMEEEIKNLEKQMADPSFWSDMERSQKVNQRIKALKDKLQNLRAVEQKWEDLRTL 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +L EEDD SI+ E + L ++ EVE + E+LLSG D N+A + +HAGAGGTE+QD Sbjct: 66 ADLGREEDDASIVGEVAAELASLRKEVERLRIETLLSGPYDRNNAIVTLHAGAGGTEAQD 125 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W ML RMYTRWAE + +K E L++ +G+EAGIKS T L++G NAYG+LK E+GVHRLVR Sbjct: 126 WVQMLYRMYTRWAEDKGYKVEVLDLLEGDEAGIKSVTFLVEGENAYGYLKAEKGVHRLVR 185 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ RRHTSF+S+ V P +DD +EI+ D +IDTYR+SGAGGQHVN T+SA+RI Sbjct: 186 ISPFDAAGRRHTSFASVDVMPELDDDEGVEINPEDLKIDTYRSSGAGGQHVNKTESAIRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+VVQCQ ERSQH NK A ML+AKL EL+ Q+ + + + I WG QI Sbjct: 246 THIPTGIVVQCQNERSQHSNKETAMKMLKAKLLELKEQEEQAKISDIKGELKRIEWGSQI 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSY+ QPY MVKD RTN E + + V+DGD+D F+ L + Sbjct: 306 RSYIFQPYTMVKDHRTNAEIGNVNAVMDGDIDLFISEYLKM 346 >gi|298291326|ref|YP_003693265.1| peptide chain release factor 2 [Starkeya novella DSM 506] gi|296927837|gb|ADH88646.1| peptide chain release factor 2 [Starkeya novella DSM 506] Length = 376 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 213/353 (60%), Positives = 267/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L D+D + RL+ LN EDP+LW + A+ LM+ER L++ + I+ Sbjct: 11 EIREAAGLLRQHIDFDRSKARLAELNALAEDPNLWNDPERAQKLMQERGTLEDGLGAIER 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I L DN+ L+EL E D SI+ E + L R+K EV +Q E+LLSGEADSND+YLEV Sbjct: 71 INRELADNVELIELGEAEGDDSIVDEAAAALDRLKAEVARRQLEALLSGEADSNDSYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGT+SQDWA MLLRMYTRWAE+R FK E +E GE AG+KSAT+L+KG NAYGWL Sbjct: 131 HAGAGGTDSQDWALMLLRMYTRWAERRGFKVELIEEQAGETAGLKSATMLVKGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN+RR TSF+SI VYPV+DD I ++I E+D R+DT R+ GAGGQ Sbjct: 191 KTEGGVHRLVRISPFDSNARRQTSFASIDVYPVIDDRIVVDIKEADVRVDTMRSGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+THIPTG+ V Q +RSQHKN+A AW+MLRAKLYE+EL+KRE A ++ Sbjct: 251 HVNKTESAVRLTHIPTGIAVVSQGDRSQHKNRATAWDMLRAKLYEMELKKREAQAAADQA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KT+IGWG QIRSYVLQPYQ+VKDLRT + +P +VLDGDLD FM+A LA + Sbjct: 311 AKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALAQR 363 >gi|238926688|ref|ZP_04658448.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531] gi|238885445|gb|EEQ49083.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531] Length = 368 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 232/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ + + ++++ L K +P W + A+ L +E L + K + Sbjct: 12 LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYKGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ +EE D S+ + L I +E Q E LLSG+ D+N+A L +H Sbjct: 72 MAKYEDAETLYEMGIEEGDASMEDDIRAELDLITEGLETLQLEVLLSGDYDANNAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSATL IKG NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFAVETADLQPGDEAGVKSATLFIKGHNAYGFLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS +RRHTSFS+ V P +DD++E+ I+ D R+D YRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGV 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RTN E + V+DG++D F++A L K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363 >gi|315499977|ref|YP_004088780.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48] gi|315417989|gb|ADU14629.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48] Length = 373 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 207/352 (58%), Positives = 253/352 (71%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L DWD A++RL LN + EDP LW EA+ +MRER L + + + Sbjct: 12 IEQSIGLLRRRLDWDVALRRLDELNARVEDPTLWDKPEEAQSVMRERTKLSGGVDAVNSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D L ELA E D +L+E L+ IK + + E+LLSGEAD NDAY+E++ Sbjct: 72 TKELQDALDYAELADMEGDEELLEEARAMLKAIKEKAARAELEALLSGEADGNDAYVEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA +LLRMYTRWA + E GE+AGIKSAT+++KG NAYGWLK Sbjct: 132 SGAGGTESCDWAGILLRMYTRWATQHGMTVSIEEETPGEQAGIKSATIMVKGTNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQH Sbjct: 192 TEAGVHRLVRISPFDSNARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVR+THIPTG+ V CQ RSQH N+ +AW MLRA+LYELELQKRE E Sbjct: 252 VNKTDSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYELELQKREAAQAALEDQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQMVKDLRT++E + VLDGDLD FM A+LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTDVETSDSQGVLDGDLDAFMGASLAQR 363 >gi|298500779|ref|ZP_07010582.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae MAK 757] gi|297540560|gb|EFH76618.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae MAK 757] Length = 344 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 182/342 (53%), Positives = 241/342 (70%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ + D Sbjct: 1 GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVE 60 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E +D E L ++ ++E +F + SG+ DS+D YL++ AG+GGTE+ Sbjct: 61 GLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRL Sbjct: 121 QDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRL 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAV Sbjct: 181 VRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAV 240 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG Sbjct: 241 RITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGS 300 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 301 QIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 341 >gi|292669366|ref|ZP_06602792.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541] gi|292649001|gb|EFF66973.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541] Length = 368 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 234/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ + + ++++ L K +P W + A+ L +E L + +++ Sbjct: 12 LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYRDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ +EE+D S+ + L I +E Q E LLSGE D+NDA L +H Sbjct: 72 VAKYEDAETLYEMGIEENDASMEADIRAELTLISEGLETLQLEVLLSGEYDANDAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F + ++ G+EAG+KSATL IKG NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVDTADLQPGDEAGVKSATLFIKGHNAYGFLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS +RRHTSFS+ V P +DD++E+ I+ D R+D +RASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYFRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIARLEGV 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RTN E + V+DGD+D F++A L K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGDIDPFIRAYLNAK 363 >gi|297580789|ref|ZP_06942715.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae RC385] gi|297535205|gb|EFH74040.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae RC385] Length = 344 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 182/342 (53%), Positives = 242/342 (70%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ + D Sbjct: 1 GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVE 60 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E +D E L +++++E +F + SG+ DS+D YL++ AG+GGTE+ Sbjct: 61 GLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRL Sbjct: 121 QDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRL 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAV Sbjct: 181 VRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAV 240 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG Sbjct: 241 RITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGS 300 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 301 QIRSYVLDDS-RIKDLRTGIENRNTQAVLDGDLDKFIEASLK 341 >gi|227891182|ref|ZP_04008987.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC 11741] gi|227867056|gb|EEJ74477.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC 11741] Length = 355 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 167/347 (48%), Positives = 232/347 (66%), Gaps = 1/347 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD D ++++ + +P W + +A+ ++ E L E+ + + D Sbjct: 2 NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61 Query: 69 NLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + LEL E DD + + +N Q + ++ Q LLS + D N+A LE+H GAGG Sbjct: 62 LGVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDW +MLLRMYTRWA + FK E ++ G++AGIKS TL+I+G NAYG+L+ E+GV Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DS RRHTSF+S+ V P +DDS+E+E+ D +++ +RASGAGGQH+N T Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ HIPTG+VV Q +RSQ +N+A A NMLRAKLY+LE++++E+ + + +IG Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEVEEKEKQRAAIQGEQLDIG 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L K Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348 >gi|242372989|ref|ZP_04818563.1| peptide chain release factor 2 [Staphylococcus epidermidis M23864:W1] gi|242349315|gb|EES40916.1| peptide chain release factor 2 [Staphylococcus epidermidis M23864:W1] Length = 386 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 167/355 (47%), Positives = 232/355 (65%), Gaps = 1/355 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M + L LGGLFD +N + DP W + +A+ ++ + L + ++ Sbjct: 26 MNIRITLTKLGGLFDLENKETNIQEYEEMMADPGFWDDQNKAQDIIDKNNALKSIVNGYH 85 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ + + D EL EE D + E + + + K +++ + + LL G D+N+A LE Sbjct: 86 DLANEVEDMSATRELLQEEYDEDMKAELEEEVIQFKEKMDQYELQLLLDGPHDANNAILE 145 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTESQDWA+MLLRMY R+ E++ FK E ++ G+EAG+KS TLLIKG NAYG+ Sbjct: 146 LHPGAGGTESQDWASMLLRMYQRYGEQKGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGY 205 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAG 239 LK E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAG Sbjct: 206 LKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFDNDEIEIEINPDDITVDTFRASGAG 265 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH+N T+SA+RITH PTG+VV Q ERSQ KN+ A ML++KLY+L+L+++E Sbjct: 266 GQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEI 325 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY MVKD RTN E V+DG+++ F++A L + Sbjct: 326 RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIEPFIEAYLRKE 380 >gi|121535512|ref|ZP_01667321.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1] gi|121305931|gb|EAX46864.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1] Length = 332 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 169/327 (51%), Positives = 230/327 (70%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K P W + EA+ + +E L ++IS ++++ R D L +L ++E D S+ Sbjct: 1 MEHKMSAPDFWDDPAEAQKIAQEVTALKDSISQYQQLRSRHSDVAALWQLGMDEGDDSVY 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L+ + ++E + LL+GE D+N+A L +HAGAGGTE+QDWA MLLRMY RWA Sbjct: 61 DEVAAELRALAKDLEQLELTVLLTGEYDANNAILTLHAGAGGTEAQDWAQMLLRMYMRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EKR +K E L+ GEEAGIKSAT+ + G NAYG+LK E+GVHRLVRISP+D++ RRHTS Sbjct: 121 EKRGYKVELLDALAGEEAGIKSATITVAGRNAYGYLKAEKGVHRLVRISPFDASGRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+++ V P +DD+ EI I+ +D +IDT+R+ GAGGQHVN T+SAVRITH+PTG+VVQCQ Sbjct: 181 FAAVDVMPEIDDNTEIVINPADLKIDTFRSGGAGGQHVNKTESAVRITHLPTGIVVQCQS 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ +N+ QA +LRAKL+ELE QKRE+ + I WG QIRSYV PY +VKD Sbjct: 241 ERSQIQNREQAMRLLRAKLFELERQKREQKKSELAGDYQAIEWGSQIRSYVFHPYNLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 RTN E + V+DG++D F++A L Sbjct: 301 HRTNAETGNVQAVMDGEIDLFIEAYLR 327 >gi|113867189|ref|YP_725678.1| protein chain release factor B [Ralstonia eutropha H16] gi|113525965|emb|CAJ92310.1| protein chain release factor B (RF-2) [Ralstonia eutropha H16] Length = 357 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 176/345 (51%), Positives = 248/345 (71%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D V RL +N EDP +W N A+ L +E++ ++ +S + ++ D L Sbjct: 11 KIYGGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKAIEGVVSVLSKLTDDLS 70 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L ELA EE D L+ +++ + V +F + SGE D +A++++ AGAGG Sbjct: 71 GAEELFELAREEGDDDTLEAIEADVKGFEEIVAGMEFRRMFSGEMDQANAFIDIQAGAGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ I+G A+G+L+ E GV Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++G Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 311 WGHQIRSYVL-DQSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLK 354 >gi|85374178|ref|YP_458240.1| protein chain release factor B [Erythrobacter litoralis HTCC2594] gi|84787261|gb|ABC63443.1| protein chain release factor B [Erythrobacter litoralis HTCC2594] Length = 375 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 206/353 (58%), Positives = 266/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DW+ A++RL LN + +DP LW + EA+ + RE++ L+ A+ ++E Sbjct: 11 RIEAALALVRQSLDWERALRRLDELNARVQDPDLWNDPKEAQAISREQKTLETAVKTVRE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +EL E D +++E +LQ++ + + ++LLSGEAD ND Y+E+ Sbjct: 71 IGSEMADAIEFVELGEAEGDEDVVKEGLASLQKLADRADADKVQALLSGEADGNDTYIEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA MLLRMY RWAE+R FK E +E G++AGIKSATLL+KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLLRMYARWAERRGFKVETVEYQAGDQAGIKSATLLVKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIEI++SD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEINDSDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV Q +RSQHKN+A A NML+A+L+E E+ +RE A+ Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYVLQPYQMVKDLRT + +SP DVLDG LD ++ A LA + Sbjct: 311 EKTEIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPDDVLDGALDPYISAALAQR 363 >gi|86136665|ref|ZP_01055244.1| peptide chain release factor 2 [Roseobacter sp. MED193] gi|85827539|gb|EAQ47735.1| peptide chain release factor 2 [Roseobacter sp. MED193] Length = 374 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 197/352 (55%), Positives = 253/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L +W+ A RL N + EDP+LW + A+ LMRERQ+L +AI K Sbjct: 11 EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDAEAAQKLMRERQNLVDAIDTYKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++ + + L+ +K+ K+ E+LL GEADSND +LE+ Sbjct: 71 IKQDLADNIELIELGEMEEDQEVITDAEEALKALKVSAAEKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEI+++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIDVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 310 NKGDAGWGSQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|74316939|ref|YP_314679.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC 25259] gi|74056434|gb|AAZ96874.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC 25259] Length = 349 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 173/342 (50%), Positives = 242/342 (70%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG FD+ RL + +E P W + A+ L RER+ L++ + + + L D Sbjct: 6 GGFFDYPVKKDRLEEVVRLSEAPDFWNDAARAQELGRERKSLEDVVLVLDRVTSGLKDAG 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+A EE+D L ++ ++ +V +F + S AD ++ +L++ AGAGGTE+ Sbjct: 66 ELFEMAREENDDDTLAAVQADIDGLEKDVATLEFRRMFSNPADPSNCFLDIQAGAGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++AE++ FK E LE +G+ AGIKSA++ I+G AYG+L+ E GVHRL Sbjct: 126 CDWASMLLRQYLKYAERKGFKAELLEESEGDVAGIKSASIKIEGDYAYGYLRTETGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP VDDSIE+EI+ +D R+DTYRASGAGGQH+N TDSAV Sbjct: 186 VRKSPFDSSGGRHTSFASVFVYPEVDDSIEVEINPADLRVDTYRASGAGGQHINKTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIP+G+VVQCQ +RSQHKN+A+A +ML++KLYE EL+KR+ + E+ K ++GWG Sbjct: 246 RITHIPSGIVVQCQNDRSQHKNRAEAMSMLKSKLYEAELRKRQAEQDKLEAGKADVGWGH 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 306 QIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 346 >gi|117617639|ref|YP_857857.1| peptide chain release factor 2 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166223621|sp|A0KNK6|RF2_AERHH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|117559046|gb|ABK35994.1| peptide chain release factor 2 (programmed frameshift) [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 365 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 175/351 (49%), Positives = 235/351 (66%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G D+D +RL +N + E P +W A+ L +ER L+N + I Sbjct: 13 ELSERTELLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVALENVVGTIDT 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D +L+ELA+E +D E ++ ++ +F + SG+ D +D Y+++ Sbjct: 73 LTQGADDVAMLVELAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDPSDCYIDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW + +K E +E +G+ AGIKSAT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q L+AKLYELE+QK+ E Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 TKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362 >gi|313201599|ref|YP_004040257.1| peptide chain release factor 1 [Methylovorus sp. MP688] gi|312440915|gb|ADQ85021.1| peptide chain release factor 1 [Methylovorus sp. MP688] Length = 347 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 176/343 (51%), Positives = 245/343 (71%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD++ QRL ++ EDP +W + ++ L +ER+ L+ + + E+ + L D+ Sbjct: 3 FGGIFDFETKQQRLEEVSQLLEDPSIWNDNERSQKLGKERRELEFVVKSLTEVDNSLRDS 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A EE+D + L + + ++ +VE +F + + D N+ ++++ +G+GGTE Sbjct: 63 AELFEMAREENDDATLLGIDADSKALEKQVEEMEFRRMFANPMDGNNCFIDIQSGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+MLLRMY R+ E+R FK E LE +G+ AG+KSA+L I G AYG+L+ E GVHR Sbjct: 123 AQDWASMLLRMYLRYCERRGFKVEVLEESEGDVAGLKSASLKISGDYAYGYLRTESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S+ V+P VDDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 183 LVRKSPFDSGNRRHTSFASVSVFPEVDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQH+NKA+A NML+A+LY+LEL KR + E +KT+IGWG Sbjct: 243 VRITHLPTNTVVQCQNDRSQHRNKAEAMNMLKAQLYQLELNKRNQEKQALEDAKTDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN+E + VLDGDLD F+ +L Sbjct: 303 HQIRSYVL-DQSRIKDLRTNVEIGNTQGVLDGDLDPFISESLK 344 >gi|319795017|ref|YP_004156657.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS] gi|315597480|gb|ADU38546.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS] Length = 367 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 172/350 (49%), Positives = 245/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L D+D +RL +N EDP++W + +A+ L RE++ LD+ + + + Sbjct: 16 LSVRTVDLRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN L E++ EE D LQ SD+ ++ +++ +F + + AD +A++++ Sbjct: 76 TNGLSDNSELFEMSKEEGDMDGLQSISDDAATLEADIKQLEFRRMFNNPADPLNAFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++AE++ FKT+ + G+ AGIK AT+ ++G A+G L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+SI+VYP +DDSIEI+I+ SD R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIDINPSDVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E E S Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 364 >gi|304437837|ref|ZP_07397786.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369194|gb|EFM22870.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 368 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 177/352 (50%), Positives = 232/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ + + ++++ L K +P W + A+ L +E L + K + Sbjct: 12 LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELAALKGGVDTYKGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ +EE D S+ + L I +E Q E LLSG+ D+NDA L +H Sbjct: 72 MAKYEDAETLYEMGIEEGDASMEDDIRAELDLIAEGLETLQLEVLLSGDYDANDAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSATL IKG NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSATLFIKGHNAYGFLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS +RRHTSFS+ V P +DD++E+ I+ D R+D YRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGV 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RTN E + V+DG+LD F++A L K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGELDPFIRAYLNAK 363 >gi|312109506|ref|YP_003987822.1| peptide chain release factor 2 [Geobacillus sp. Y4.1MC1] gi|311214607|gb|ADP73211.1| Peptide chain release factor 2 [Geobacillus sp. Y4.1MC1] Length = 367 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 179/353 (50%), Positives = 238/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L + G D + R+ L + +P W + A+ ++ E L + + + Sbjct: 13 KMAKRLAEIRGSLDLEAKQARIRELEEQMAEPDFWDDQKAAQTVINEANALKDLVGEFQS 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++R + + EL EE D + QE +R+ + + + LL+ D N+A LE+ Sbjct: 73 LEERFENLEVTYELIKEEPDEDLQQELVTEAKRLTKDFSEFELQLLLNEPYDKNNAILEL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+ GEEAGIKS TLLIKG NAYG+L Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D++ RRHTSF S V P +DD IEIEI + RIDTYR+SGAGGQ Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKALNMLKAKLYQKKLEEQQAELAEIRG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L K Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365 >gi|307332073|ref|ZP_07611163.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu 4113] gi|306882296|gb|EFN13392.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu 4113] Length = 830 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 161/354 (45%), Positives = 221/354 (62%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + +L + +E+ Sbjct: 473 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 532 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D E L+ ++ V+ + +LLSGE DS +A + V Sbjct: 533 RGRIDDLEVLFELAADEGDADARAEAESELEAVRKAVDEMEVRTLLSGEYDSREALVNVR 592 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KT+ E EEAGIKS T ++ P AYG L Sbjct: 593 AEAGGVDAADFAEQLQRMYLRWAERHGYKTQIYETSYAEEAGIKSTTFAVQIPYAYGTLS 652 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 653 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 712 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GES 301 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + Sbjct: 713 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMDALK 770 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 771 GDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 824 >gi|167767702|ref|ZP_02439755.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1] gi|167710441|gb|EDS21020.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1] gi|291558928|emb|CBL37728.1| bacterial peptide chain release factor 2 (bRF-2) [butyrate-producing bacterium SSC/2] Length = 373 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 177/351 (50%), Positives = 235/351 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L L G + +R+ L E+P W NV E++ +M+E + L + +++ Sbjct: 15 QEPLEDLSGSLALEAKKERIDQLELNMEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLK 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D L+++A E++D +++E + + + E + +LL+GE D +DA L +HA Sbjct: 75 TKYEDIETLIDMAEEDEDADLIEEATALMDEFEKTYEELRISTLLTGEYDKDDAILTLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA ML RM+TRWA K+ + TE L+ DG+EAGIKS T+ I G NAYG+L+ Sbjct: 135 GAGGTESCDWAGMLYRMFTRWAGKKGYGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++ +R TSF+S V P + D IE+EI++ D RIDTYRASGAGGQH+ Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFASCDVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSA+RITH+PTG+VVQCQ ERSQHKNK QA ML+ KLY L+ Q+ E + Sbjct: 255 NKTDSAIRITHLPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + GWG QIRSYVLQPY MVKD RTN E +PS VLDGDLD FM A LA Sbjct: 315 GDNGWGNQIRSYVLQPYTMVKDHRTNFESGNPSAVLDGDLDGFMNAYLAWD 365 >gi|254467077|ref|ZP_05080488.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I] gi|206687985|gb|EDZ48467.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I] Length = 375 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 199/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L +W+ A RL N + EDP+LW + A+ LMRERQ L ++I+ K Sbjct: 11 EIEKSLELLAQRMNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQALVDSINTYKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++++ ++L+ +K K+ E+LL GEAD+ND +LE+ Sbjct: 71 IKQDLSDNIELIELGEMEEDAEVVKDAEESLKALKERAAEKELEALLDGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEK+ +K E G+EAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ SD R+DTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRVDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY+ EL +R N Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRHAEINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETSDTKGVLDGDLDGFMAATLAM 361 >gi|217974576|ref|YP_002359327.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223] gi|254790920|sp|B8E5Q1|RF2_SHEB2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|217499711|gb|ACK47904.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223] Length = 365 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + L G+FD+D +RL + + E +W + A+ L +ER L+ + I + Sbjct: 13 ELAERTQLLRGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ Sbjct: 73 MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362 >gi|301156116|emb|CBW15587.1| peptide chain release factor RF-2 [Haemophilus parainfluenzae T3T1] Length = 347 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 182/345 (52%), Positives = 244/345 (70%), Gaps = 1/345 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 C GG+FD+D V+RL +N + E P +W +A+ L +ER L+ + IK ++ L D Sbjct: 2 CFGGIFDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVSLEQVVDTIKNLEQGLED 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+E +D E L ++ ++ +F + SGE D+ D Y+++ AG+GGT Sbjct: 62 VEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+H Sbjct: 122 EAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+S Sbjct: 182 RLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++IGW Sbjct: 242 AVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 345 >gi|42784339|ref|NP_981586.1| peptide chain release factor 2 [Bacillus cereus ATCC 10987] gi|42740270|gb|AAS44194.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus ATCC 10987] Length = 380 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 229/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G D ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|323526607|ref|YP_004228760.1| peptide chain release factor 2 [Burkholderia sp. CCGE1001] gi|323383609|gb|ADX55700.1| Peptide chain release factor 2 [Burkholderia sp. CCGE1001] Length = 367 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 177/350 (50%), Positives = 248/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L G D+D+ +RL +N + EDP +W + A+ L RE++ LD+ + + + Sbjct: 16 LRTRAADLRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L E+A EE D L + Q ++ V +F + + AD N+A+L++ Sbjct: 76 HNDLRDAQDLFEMAREEGDDETLVACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 364 >gi|149914781|ref|ZP_01903311.1| LexA repressor [Roseobacter sp. AzwK-3b] gi|149811574|gb|EDM71409.1| LexA repressor [Roseobacter sp. AzwK-3b] Length = 375 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 193/353 (54%), Positives = 248/353 (70%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L L W+ A RL N + EDP LW + +A+ LMR+RQ L +AI+ Sbjct: 11 EIKTSLELLRQRMGWETARHRLEEFNARVEDPQLWDDPAKAQKLMRDRQGLVDAITTHDT 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 IQ + DN+ L+EL E D ++ E ++ + + K+ E+LL+GEAD+NDA+LE+ Sbjct: 71 IQQEMQDNVELIELGEMEGDPDVVAEAEAAIKALARKAAQKELEALLNGEADANDAFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA+ML RMY RWAE+ + E GEEAGIKS T + G NAYGWL Sbjct: 131 HAGAGGTESCDWASMLARMYVRWAEQHGYTVELQSETAGEEAGIKSVTYKVTGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ +D RIDT+R+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTFRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R E Sbjct: 251 HVNKTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNEAIAEAHD 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRT++E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTSVETSDTKGVLDGDLDQFMAATLAMD 362 >gi|296533603|ref|ZP_06896168.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957] gi|296266065|gb|EFH12125.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957] Length = 376 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 199/353 (56%), Positives = 259/353 (73%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L DWD A++RL +N + EDP LW+ EA+ +MRER L + + +K+ Sbjct: 11 QIEDSIALLRRHLDWDVALRRLDEVNARAEDPTLWEKPDEAQAVMRERNRLADQVEGVKK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L L+ELA E D + +L E + ++ ESLLSGEAD D ++EV Sbjct: 71 LEQDVKDALELIELAEAEGDGATADAAIADLHSFAAEAKRREIESLLSGEADMRDCFVEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTE+QDWA MLLRMY RWAEKR +K + E +GE+AGIKSAT+ + GPNAYGWL Sbjct: 131 NAGAGGTEAQDWAQMLLRMYQRWAEKRGYKVQLTEESEGEQAGIKSATIQVTGPNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ +RR TSF+S++V+PV+DD IEIEI+ +D + DT+RASGAGGQ Sbjct: 191 KTESGVHRLVRISPFDAAARRQTSFASVYVFPVIDDKIEIEINPADLKTDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+S VR THIPTG+V Q+RSQH+N+ A ML+A+LYELEL+KREEI E+ Sbjct: 251 HVNKTESGVRFTHIPTGIVAASTQDRSQHRNRVIAMEMLKARLYELELRKREEITAGIEA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVL PYQ+VKDLRTN+EK +P VLDG+LDDFM A LA + Sbjct: 311 GKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPDAVLDGELDDFMAAALASR 363 >gi|239816762|ref|YP_002945672.1| hypothetical protein Vapar_3791 [Variovorax paradoxus S110] gi|259585247|sp|C5CUX0|RF2_VARPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|239803339|gb|ACS20406.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 367 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 244/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L D+D +RL +N EDP++W + +A+ L RE++ LD+ + + + Sbjct: 16 LSARTADLRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN L E++ E+ D LQ +D+ ++ +++ +F + + AD +A++++ Sbjct: 76 TSGLSDNTELYEMSKEDGDMDGLQSIADDAAALETDIKQLEFRRMFNNPADPLNAFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++AE++ FKT+ + G+ AGIK AT+ ++G A+G L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+SI+VYP +DDSIEIEI+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIEINPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E E S Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 364 >gi|218900306|ref|YP_002448717.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus G9842] gi|218544557|gb|ACK96951.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus G9842] Length = 380 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMSAGFWDDQQGAQAVINEANALKDMVGSFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + + EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEVTHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|300860397|ref|ZP_07106484.1| peptide chain release factor 2, programmed frameshift [Enterococcus faecalis TUSoD Ef11] gi|300849436|gb|EFK77186.1| peptide chain release factor 2, programmed frameshift [Enterococcus faecalis TUSoD Ef11] Length = 366 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 229/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++++ D + ++ + +P W N A+ L+ E L + Sbjct: 12 EMTQKITSFRRSLCLDQLEEDIAEAENRMGEPGFWDNTETAQKLINETNSLKEKYQQFHQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + L + ++ EL EE D I +E + + ++ + + LL+ D N+A +E+ Sbjct: 72 LSEELDELTVMFELQQEEYDAEIQEELEERIHLLQERLTTYELSLLLNEPYDHNNALIEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAE F+ E L+ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS RRHTSF S+ V P +DD+IEI I+ D +IDTYRASGAGGQ Sbjct: 192 KSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T+SAVRITHIPTG VV Q +RSQ KN+ QA +ML+AKLY+LE++K+ + A Sbjct: 252 HINKTESAVRITHIPTGTVVASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY MVKD RTN E + V+DGDLD F+ A L + Sbjct: 312 EQMEIGWGSQIRSYVFHPYSMVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQR 364 >gi|163731562|ref|ZP_02139009.1| peptide chain release factor 2 [Roseobacter litoralis Och 149] gi|161395016|gb|EDQ19338.1| peptide chain release factor 2 [Roseobacter litoralis Och 149] Length = 374 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 200/353 (56%), Positives = 254/353 (71%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ L D + A RL N + EDP LW + A+ LMR+RQ L +A++ Sbjct: 11 KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRDRQMLVDAMATHDN 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + DN+ L+EL EDD ++ + + L+ ++ K+ E+LL GEADSND +LEV Sbjct: 71 IKQEMADNIELIELGEMEDDADVITDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWANML RMY RWAEK+ +K E + DG+EAGIKSAT I G NAYGWL Sbjct: 131 NAGAGGTESCDWANMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+I+++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIDVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLALD 362 >gi|225027512|ref|ZP_03716704.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353] gi|224955151|gb|EEG36360.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353] Length = 371 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 165/350 (47%), Positives = 234/350 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + LG + +++ L ++ + W + +A+ + R+ ++L + +S ++ Sbjct: 15 KEPMKELGVSLALSHKHEQIKELESEMREEGFWNDPDKAQEVTRKVKNLKDTVSAYHALE 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D ++EL EE+D S++ + + L ++E + + ++LLSGE D N+A + +HA Sbjct: 75 LTLDDVSTMIELGNEENDASVIPDIEELLGEFEIEFDNLKIQTLLSGEYDKNNAIVTLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA ML RMY++WA+ FKTE L+ DG+EAGIKS T + G NAYG+LK Sbjct: 135 GAGGTESCDWAGMLYRMYSKWADSHGFKTEVLDYLDGDEAGIKSITFEVNGENAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++ +R TSF+S V P +++ + +EI++ D RIDTYRASGAGGQH+ Sbjct: 195 ERGVHRLVRISPFNAAGKRQTSFASCDVMPDIEEDLSVEIADEDIRIDTYRASGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSA+RITHIPTGVVVQCQ ERSQHKNK +A ML+AKLY ++ Q+ E + Sbjct: 255 NKTDSAIRITHIPTGVVVQCQNERSQHKNKDKAMQMLKAKLYLIKEQENREKLSDIRGEV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++ GWG QIRSYV+QPY MVKD RT E + V+DG+LD FM A L Sbjct: 315 SDNGWGNQIRSYVMQPYTMVKDHRTGEETGNVQSVMDGNLDAFMNAYLRW 364 >gi|20807024|ref|NP_622195.1| protein chain release factor B [Thermoanaerobacter tengcongensis MB4] gi|20515510|gb|AAM23799.1| Protein chain release factor B [Thermoanaerobacter tengcongensis MB4] Length = 347 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 175/342 (51%), Positives = 235/342 (68%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + + + + + DP W ++ +++ L ++++ L + + + R D L Sbjct: 3 LFDVEGIKKEIEDIEKQMSDPSFWSDLKKSQELSKKQKALKELLEEYESLLSRCEDLYTL 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +EL LEE D SI +E + +K EVE + +LLSG D N+A L +HAG+GGTE+QD Sbjct: 63 IELGLEEGDESIAEEVEREYKELKKEVENLKIRTLLSGPYDKNNAILSIHAGSGGTEAQD 122 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRWA + F+ E L+ +GEEAGIKSATLLIKGP AYG+LKGE GVHRLVR Sbjct: 123 WAEMLLRMYTRWANDKGFEVEILDYLEGEEAGIKSATLLIKGPFAYGYLKGEAGVHRLVR 182 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ RRHTSF+ + V P ++D IEIEI D +IDT+RASGAGGQHVN T+SAVRI Sbjct: 183 ISPFDAAGRRHTSFALVEVIPELEDDIEIEIRPEDLKIDTFRASGAGGQHVNKTESAVRI 242 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++R+E + E WG QI Sbjct: 243 THLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKERKEKIEDLKGEHREAAWGNQI 302 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RSYV QPY +VKD RTN E+ + + V+DG++D F+ A L K Sbjct: 303 RSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGFINAYLKQK 344 >gi|46201582|ref|ZP_00208157.1| COG1186: Protein chain release factor B [Magnetospirillum magnetotacticum MS-1] Length = 371 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 217/352 (61%), Positives = 264/352 (75%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L +WD A+ RL LN E+P LW + A+ +MRER LD+AI + + Sbjct: 12 IRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNDLDSAIQGCRAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D + L+EL E D +++ + + ++ +K + E+LLSGEAD ND Y+E++ Sbjct: 72 ERELADLIELIELGEMEGDQTVIDDAEEQIRAVKERAAKMELETLLSGEADHNDCYMEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA MLLRMYTRWAEK +K E LE GE+AGIKSAT+ I G NAYGWLK Sbjct: 132 AGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESSGEQAGIKSATIRILGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS WVYPV+DDSI+I+I+ES+CRIDTYRASGAGGQH Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFSSAWVYPVIDDSIDIQINESECRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE A E Sbjct: 252 INKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363 >gi|260582141|ref|ZP_05849935.1| peptide chain release factor 2 [Haemophilus influenzae NT127] gi|260094773|gb|EEW78667.1| peptide chain release factor 2 [Haemophilus influenzae NT127] Length = 351 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 184/347 (53%), Positives = 246/347 (70%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L C GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ IK ++ L Sbjct: 4 LRCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQTLGKERVSLEQVVNTIKNLEQGL 63 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E +D E L ++ ++E +F + SGE D+ D Y+++ AG+G Sbjct: 64 EDVDGLLELAIEAEDEDTFHEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RW E + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G Sbjct: 124 GTEAQDWTEMLLRMYLRWTESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++I Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 GWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349 >gi|308187994|ref|YP_003932125.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1] gi|308058504|gb|ADO10676.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1] Length = 351 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 179/344 (52%), Positives = 237/344 (68%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P +W A+ L +ER L+ + ++++ L D Sbjct: 7 FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVQTLEQMSQGLEDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E +D E L ++ ++ +F + SGE DS D Y+++ AG+GGTE Sbjct: 67 QGLLELAVEAEDEETFNEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ E GVHR Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 349 >gi|148652647|ref|YP_001279740.1| peptide chain release factor 2 [Psychrobacter sp. PRwf-1] gi|148571731|gb|ABQ93790.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter sp. PRwf-1] Length = 325 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 172/324 (53%), Positives = 226/324 (69%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P LW + A + +E+ LD I+ I + L D +LELA+E DD +L+E Sbjct: 1 MASPELWNDPERATKISKEKSQLDAVITTITGLDTTLEDAAAMLELAVEADDEGLLEEVQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + VE +F+ + GE D+N+ ++++ +G+GGTE+QDWA MLLRMYTRW E Sbjct: 61 NELNAAQALVEDLEFKRMFDGEMDANNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E +E+ G AG+KSA+ + G A+GWL+ E GVHRLVR SP+DSN+ RHTSF+++ Sbjct: 121 FKVEIIEVSAGSVAGVKSASFKVSGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V P +DD EI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PTG VVQCQ ERSQ Sbjct: 181 FVSPEIDDDFEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTGTVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NKA A MLRAKLYELE+QKR E E +K+++GWG QIRSYVL +KDLRT Sbjct: 241 HGNKATAMKMLRAKLYELEMQKRMEQQQAVEDNKSDVGWGSQIRSYVLDDS-RIKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDGDLD F++A+L Sbjct: 300 VETFNTGAVLDGDLDQFIEASLKA 323 >gi|322420980|ref|YP_004200203.1| peptide chain release factor 2 [Geobacter sp. M18] gi|320127367|gb|ADW14927.1| Peptide chain release factor 2 [Geobacter sp. M18] Length = 371 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 175/351 (49%), Positives = 246/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L GLFD D+ +R+ L+ T P W + A+ +++ R ++ ++ + + Sbjct: 12 LVERIDKLRGLFDVDDKKERMQELDELTNRPDFWNDAENAQKVLKARTAMEKDVTAWENL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+EL EE+D + L E + ++ V +F +LSG D++ A++ ++ Sbjct: 72 DRQARDIRELIELGSEEEDEATLAEVAAMNAELENGVSQAEFRRMLSGPHDASGAFVSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA MLLRMY R+ EK+ ++TE + +G+ AGIK T G AYG+LK Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCEKKGWRTEITDYQEGDGAGIKGVTFAATGEFAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQ 241 + G+HRLVRISP+DS++RRHTSF+S++V+PV+ ++ IE++I+ESD RIDTYR+SGAGGQ Sbjct: 192 ADAGIHRLVRISPFDSSARRHTSFASVFVFPVIEEEDIEVKIAESDLRIDTYRSSGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSA+RITH+PTG+VV CQ ERSQH NKA A +LR+KLYE+EL++RE A+ Sbjct: 252 HVNTTDSAIRITHLPTGIVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG LDDF+ L Sbjct: 312 EKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALDDFVVPFLM 362 >gi|254477534|ref|ZP_05090920.1| peptide chain release factor 2 [Ruegeria sp. R11] gi|214031777|gb|EEB72612.1| peptide chain release factor 2 [Ruegeria sp. R11] Length = 374 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 201/351 (57%), Positives = 252/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L DW+ A RL N + EDP+LW + A+ LMRERQ L +AI K I Sbjct: 12 IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRERQMLVDAIDTYKSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL EDD ++++ + L +K + K+ E+LL GEADSND +LE++ Sbjct: 72 KQELADNIELIELGEMEDDNEVVKDAEEALVALKEKAAEKELEALLDGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E G+EAGIKSA I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ +D R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPADIRVDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY+ EL +R N + Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|192291110|ref|YP_001991715.1| hypothetical protein Rpal_2731 [Rhodopseudomonas palustris TIE-1] gi|192284859|gb|ACF01240.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 376 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 215/353 (60%), Positives = 274/353 (77%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L D D + RL+ LN EDP LW + +A+ LM+ER L+++++ I + Sbjct: 11 EIKQSVGLLRRHLDVDQSTVRLAELNKLAEDPDLWNDPQKAQKLMQERTSLEDSLTGIGK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L DN+ ++EL E D I++E D L+ +K EV ++ E+LLSGEAD D YLEV Sbjct: 71 VERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELEALLSGEADRFDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMY RWAEK FK E LE +GEEAGIKSAT+ I G NAYGWL Sbjct: 131 HAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGIKSATIQISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+ESD R+DT R+ GAGGQ Sbjct: 191 KTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAESDVRVDTMRSGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LYE+EL+KREE A ++ Sbjct: 251 HVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+FM ATLA + Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLAQR 363 >gi|71281667|ref|YP_270738.1| peptide chain release factor 2, programmed frameshift [Colwellia psychrerythraea 34H] gi|123631202|sp|Q47WT4|RF2_COLP3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|71147407|gb|AAZ27880.1| peptide chain release factor 2, programmed frameshift [Colwellia psychrerythraea 34H] Length = 365 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + N L G D+D +RL ++ + E P +W A+ L +ER L+ ++ I E Sbjct: 13 EIRERANLLRGYLDYDVKAERLVEVSRELELPDVWNEPERAQALGKERSSLEEVVNTIVE 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D L+ELA+EE D + + +E +F + SGE D+N++YL++ Sbjct: 73 LETGCEDIEGLVELAVEESDQETFDDAEVEADALDKVLEKLEFRRMFSGEQDANNSYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWA ML+RMY RW E +KTE +E+ DG+ AGIK T+ G AYGWL Sbjct: 133 QSGSGGTEAQDWAEMLMRMYLRWGEAHGYKTEVIEVTDGDVAGIKGCTIKYTGEYAYGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+IEI+I+ +D RIDT+RASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIEIDINPADLRIDTFRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSA+RITH PTG VV CQ +RSQHKN+A A +L+AKLYE+E+QK+ + E Sbjct: 253 HVNKTDSAIRITHEPTGAVVACQADRSQHKNRATAMKLLKAKLYEMEMQKQNSDKQVLED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 GKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFLEASLK 362 >gi|297539161|ref|YP_003674930.1| peptide chain release factor 2 [Methylotenera sp. 301] gi|297258508|gb|ADI30353.1| peptide chain release factor 2 [Methylotenera sp. 301] Length = 351 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 174/345 (50%), Positives = 241/345 (69%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG+FD++ QRL +N EDP +W + +++ L +E++ L+ + ++ ++ L Sbjct: 5 TTLGGIFDFETKSQRLEEVNGLLEDPKVWDDNKKSQALGKEKRALELVVHSLQAVESSLN 64 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D+ L E+A EE+D L + Q ++ +V +F + SGE DSN+ ++E +G+GG Sbjct: 65 DSRELFEMAREENDDDTLLSVDVDSQAVEKQVAEMEFRRMFSGELDSNNCFIEFQSGSGG 124 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA MLLRMY R+ E++ FK E LE DG+ AGIK A++ + G AYG L+ E GV Sbjct: 125 TEAQDWAAMLLRMYLRYCERKGFKVEVLEESDGDVAGIKGASIKVTGDYAYGTLRTENGV 184 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN++RHTSF+S+ ++P VDDSI+I+I+ +D RIDTYRASGAGGQH+N TD Sbjct: 185 HRLVRKSPFDSNAKRHTSFASVQIFPEVDDSIQIDINPADLRIDTYRASGAGGQHINKTD 244 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT VVQCQ +RSQH+N+ +A NML+ LY LEL KR E +KT+IG Sbjct: 245 SAVRITHLPTNTVVQCQNDRSQHRNRDEAMNMLKGALYNLELNKRNADKQALEDAKTDIG 304 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTN+E + VLDGDLD F++ +L Sbjct: 305 WGHQIRSYVL-DQGRIKDLRTNVEIGNTQGVLDGDLDPFIQVSLK 348 >gi|315268921|gb|ADT95774.1| Peptide chain release factor 2 [Shewanella baltica OS678] Length = 365 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 234/351 (66%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + L G D+D +RL + + E +W + A+ L +ER L+ + I + Sbjct: 13 ELAERTQLLRGYLDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ Sbjct: 73 MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362 >gi|294010764|ref|YP_003544224.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S] gi|292674094|dbj|BAI95612.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S] Length = 375 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 210/353 (59%), Positives = 265/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L+ L DWD A++RL LN + EDP LW N +A+ +MRER LD AI + Sbjct: 11 RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQRQAQEVMRERTRLDAAIGATRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I D L+E+A E D ++ E +L+ + + + ++LL+GEAD++D YLE+ Sbjct: 71 IDSEKTDTAELIEMAEAEGDEDMVNEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R +K E ++ G++AGIKSAT L KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G++V Q +RSQHKN+A A NML+A+LYE EL++REE A+ Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG LD FM A L+ K Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363 >gi|225077011|ref|ZP_03720210.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens NRL30031/H210] gi|261379582|ref|ZP_05984155.1| peptide chain release factor 2 [Neisseria subflava NJ9703] gi|224951568|gb|EEG32777.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens NRL30031/H210] gi|284798056|gb|EFC53403.1| peptide chain release factor 2 [Neisseria subflava NJ9703] Length = 367 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 242/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+A+EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ATGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|327481446|gb|AEA84756.1| peptide chain release factor 2 [Pseudomonas stutzeri DSM 4166] Length = 370 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 185/345 (53%), Positives = 244/345 (70%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + GG+FD+D RL +N + EDP++W A+ L RER L + I ++ L Sbjct: 24 SQFGGIFDYDQKHDRLVEVNRELEDPNVWNKPEYAQSLGRERATLAQIVETIDDLTGSLA 83 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D+ LLE+A EE+D + + ++R++ +E +F + S E D N+ YL++ AG+GG Sbjct: 84 DSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGG 143 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWAN+LLRMY RWA+KR F E +E+ +GE AGIK AT+ IKG A+GWL+ E GV Sbjct: 144 TEAQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGV 203 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 204 HRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 263 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E SK++IG Sbjct: 264 SAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIG 323 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRT +E++ VLDGDLD +++A+L Sbjct: 324 WGHQIRSYVLDDS-RIKDLRTGVERSDCQKVLDGDLDGYLEASLK 367 >gi|329120730|ref|ZP_08249392.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC BAA-1200] gi|327460527|gb|EGF06863.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC BAA-1200] Length = 417 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 168/350 (48%), Positives = 237/350 (67%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ +RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 66 LEQRSAAIRSYMDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKLLEGVVLTLDNI 125 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+A+EE+D ++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 126 GGGIEDNRMLIEMAVEENDEDGFAAIESDVAELESQMAGLEFKRMFNQPADHNNCFVDIT 185 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E +E DGE AGI ATL ++G AYG L+ Sbjct: 186 AGAGGTEAEDWAGMLFRMYSRYAERKGFKLEIIEEDDGEIAGINRATLRVEGEYAYGLLR 245 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH Sbjct: 246 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQH 305 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+VVQ Q RSQH+N+ MLR+KL+ELE++KR E E Sbjct: 306 INKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEG 365 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K ++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 366 KADVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 414 >gi|319638812|ref|ZP_07993570.1| peptide chain release factor 2 [Neisseria mucosa C102] gi|317399716|gb|EFV80379.1| peptide chain release factor 2 [Neisseria mucosa C102] Length = 367 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 242/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+A+EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEDG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|307729220|ref|YP_003906444.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003] gi|307583755|gb|ADN57153.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003] Length = 367 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 178/350 (50%), Positives = 249/350 (71%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L G D+D+ +RL +N + EDP +W + A+ L RE++ LD+ + + + Sbjct: 16 LRTRAADLRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L E+A EE D L + Q ++ V +F + + AD N+A+L++ Sbjct: 76 DNDLRDTQDLFEMAREEGDDETLLACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+E + E+ Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 364 >gi|307294100|ref|ZP_07573944.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1] gi|306880251|gb|EFN11468.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1] Length = 375 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 209/353 (59%), Positives = 264/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L+ L DWD A++RL LN + EDP LW N A+ +MRER L+ AI + Sbjct: 11 RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQKLAQEVMRERTRLEAAIGATRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I D L+E+A E D ++ E +L+ + + + ++LL+GEAD++D YLE+ Sbjct: 71 IDSEKTDTAELIEMADAEGDEDMVTEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R +K E ++ G++AGIKSAT L KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G++V Q +RSQHKN+A A NML+A+LYE EL++REE A+ Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG LD FM A L+ K Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363 >gi|126726324|ref|ZP_01742165.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150] gi|126704187|gb|EBA03279.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150] Length = 375 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 198/351 (56%), Positives = 250/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ L L D++ RL N TEDP+LW + +A+ LMR+RQ L +A + ++ Sbjct: 12 INKSLALLRQRMDFETVPHRLEEFNALTEDPNLWNDPEKAQKLMRDRQLLLDAYNNYNKL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD ++ E L+ + K+ E+LL+GEADSND +LE++ Sbjct: 72 AQDLADNVELIELGEMEDDEDVVAEAEAGLRSVVEIAAKKELEALLNGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWANML RMY RWAE R +K E GEEAGIKSA I G NAYGWLK Sbjct: 132 SGAGGTESCDWANMLARMYVRWAEARGYKVELQSETAGEEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSFSSIWVYPVVDD+I+IE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFSSIWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N + Sbjct: 252 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAL 361 >gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus DSM 2032] gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus DSM 2032] Length = 369 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 177/352 (50%), Positives = 238/352 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L D D +++ L +T P+ W N EAK + R+ L + I ++ Sbjct: 17 LKGKMLVLKEHLDLDGKREQVELLERQTVSPNFWDNQSEAKRVQRQLGQLQDLIGVWEKN 76 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +LL++A EE+D QE L ++ VE + E + SGE D+N+A L +H Sbjct: 77 FGDLEDAEMLLDMAREENDQDTYQEVVSGLDDLRRRVELVELECMFSGEHDANNAILTIH 136 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW +LLRMY RWAE + FK + L++ G+EAG KS T+++KG AYG+L+ Sbjct: 137 AGAGGTEAQDWVGILLRMYLRWAESKGFKADILDLLPGDEAGTKSVTIMVKGKYAYGYLR 196 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+D++ RRHTSF+S+ V P +DD +EIEI++ D RIDTYRASG+GGQH Sbjct: 197 SEVGIHRLVRISPFDASGRRHTSFASVMVMPELDDDVEIEINDKDIRIDTYRASGSGGQH 256 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH PTG+VVQCQ ERSQH NKA A ML A+LYE E ++++ + Sbjct: 257 VNKTDSAIRITHFPTGIVVQCQNERSQHSNKATAMKMLMARLYEREKEEQQRTQENIQGD 316 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYVLQPY+++KD RTN E+ + VLDG LD F+KA L + Sbjct: 317 KKEIAWGSQIRSYVLQPYRLIKDHRTNTEEGNVDAVLDGRLDPFIKAYLLWQ 368 >gi|315652552|ref|ZP_07905533.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986] gi|315485181|gb|EFU75582.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986] Length = 351 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 157/338 (46%), Positives = 229/338 (67%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ +++ L+ E+P W + E+ ++RE + L + + +++ D +L+E+ Sbjct: 2 DSKEKKIIELDRAMEEPSFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMG 61 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 EE+D S++ E L+ E++ + +LL+GE DS++A ++++AGAGGTES DW +M Sbjct: 62 YEENDESLIPEIEAMLEEFTKEIDALKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSM 121 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMYTRWA K + + L+I +G+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+ Sbjct: 122 LYRMYTRWAAKEGYTVDVLDILEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPF 181 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ +R TSF S + P +++ ++++I+ D RIDTYR+SGAGGQH+N T SA+RITHIP Sbjct: 182 NAAGKRQTSFVSCDIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIP 241 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TGVVVQCQ ERSQ +NK +A ML+AKL+ L+ Q E + +IGWG QIRSYV Sbjct: 242 TGVVVQCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVKDIGWGNQIRSYV 301 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +QPY MVKD RT E + + V+DGD+D F+ A L + Sbjct: 302 MQPYTMVKDHRTGAESGNVTAVMDGDIDKFIIAYLTWQ 339 >gi|326387471|ref|ZP_08209080.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM 19370] gi|326208127|gb|EGD58935.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM 19370] Length = 375 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 205/353 (58%), Positives = 261/353 (73%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DWD AV+RL L+ + EDP LW + +A+ +MRER+ LD AI +K+ Sbjct: 11 RIEGALALIRKFLDWDRAVRRLHELDARVEDPKLWDDPKQAEAVMRERRRLDAAIGTVKQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +EL E D + E L + + + ++LL+GEAD+N+A+LEV Sbjct: 71 IGQEMADAIEFVELGEMEGDEDTVAEGLATLAALAERADADKVQALLAGEADANNAFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMYTRWAE+ +K E ++ H GE AGIK TLLIKG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKGCTLLIKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+I+IEI+ +D ++DTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIDIEINPADLKVDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG++V Q +RSQHKN+A A MLRA+LYE EL KRE A+ + Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLRARLYEAELAKREAAASGEYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ VKDLRT + T+P++VLDG LD FM A L+ + Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALSQR 363 >gi|148560211|ref|YP_001258893.1| peptide chain release factor 2 [Brucella ovis ATCC 25840] gi|256369345|ref|YP_003106853.1| peptide chain release factor 2 [Brucella microti CCM 4915] gi|148371468|gb|ABQ61447.1| peptide chain release factor 2 [Brucella ovis ATCC 25840] gi|255999505|gb|ACU47904.1| peptide chain release factor 2 [Brucella microti CCM 4915] Length = 375 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 221/353 (62%), Positives = 286/353 (81%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + ++ L DWD AV+RL +LN + EDP LW + EA+ LMRERQ L+++I+ I Sbjct: 11 EIQQAISLLRRHLDWDQAVKRLGYLNQRAEDPTLWNDAQEAQKLMRERQQLEDSINGINH 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D++ L+ + EE D SI+++ ++ +K E++ +Q + LLSGEAD+ND YLEV Sbjct: 71 LKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGIKSAT+L+KG N+YG L Sbjct: 131 HAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGML 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE + + Sbjct: 251 HVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + FM+A LA + Sbjct: 311 TKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALAHR 363 >gi|241760713|ref|ZP_04758805.1| peptide chain release factor 2 [Neisseria flavescens SK114] gi|241318894|gb|EER55420.1| peptide chain release factor 2 [Neisseria flavescens SK114] Length = 367 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 242/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRIYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+A+EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ATGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|15888668|ref|NP_354349.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58] gi|15156400|gb|AAK87134.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58] Length = 342 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 231/329 (70%), Positives = 282/329 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP LW + EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL E D I+ Sbjct: 1 MNNKAEDPTLWNDASEAQKLMRERQQLDDSINGVKALEQQLKDNIELIELGEMEGDDEIV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 ++ D L+ ++ E +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KDAEDALKALRSEANRRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E++ FK E LEIHDG+EAGIKSAT+L+KG NA+GW+K E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQGFKVEVLEIHDGDEAGIKSATILVKGHNAFGWMKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQ Sbjct: 181 FSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA+LYE+ELQKREE AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARLYEVELQKREEAANAQAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT +E T+P +VLDGDL++FM+A LA + Sbjct: 301 LRTGVESTAPGNVLDGDLNEFMEAALAHR 329 >gi|84684982|ref|ZP_01012882.1| peptide chain release factor 2 [Maritimibacter alkaliphilus HTCC2654] gi|84667317|gb|EAQ13787.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2654] Length = 375 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 198/352 (56%), Positives = 246/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L W+ A RL LN TEDP LW + A+ LMRERQ L + K + Sbjct: 12 IEKSLALLRQRIGWETAEHRLEELNAMTEDPELWNDPDRAQKLMRERQSLVAQMDGYKAM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D++ L+EL EDD ++++ L+ +K + E+LL+GEAD ND +LEVH Sbjct: 72 EQEKNDSVELIELGEMEDDDEVVKDAEAALKALKERAAAAEIEALLNGEADPNDTFLEVH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA+ML RMY RWAE +K E GEEAGIKSAT I G NAYGWLK Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAHGYKVELQSTTPGEEAGIKSATYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IE+E++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEVEVAPNDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY++EL +R + N + Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNQAINEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD M ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTQGVLDGDLDGLMAATLAMD 362 >gi|114320956|ref|YP_742639.1| peptide chain release factor 2 [Alkalilimnicola ehrlichii MLHE-1] gi|114227350|gb|ABI57149.1| bacterial peptide chain release factor 2 (bRF-2) [Alkalilimnicola ehrlichii MLHE-1] Length = 354 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 176/344 (51%), Positives = 244/344 (70%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E P +W + A+ L RER L+ + + + L D Sbjct: 10 LGGIFDYDLKRERLEEVTRELEQPEVWNDPERAQSLGRERAQLEGLVETFERLDSVLGDA 69 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLE+A +E D + +L + E++ +F + SGE D +A++++ AGAGGTE Sbjct: 70 DELLEMAADEGDEETVAALQSDLGDCERELQKLEFRRMFSGEMDPANAFMDIQAGAGGTE 129 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY RW E+ FKTE +E+ +G+EAGIKSAT+ +G A+GWL+ E G+HR Sbjct: 130 AQDWANMLLRMYLRWGERHGFKTEIIELSEGDEAGIKSATVKFEGEYAFGWLRTEIGIHR 189 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++V P VDD ++I+I+ +D R+D YRASGAGGQHVN T+SA Sbjct: 190 LVRKSPFDSGNRRHTSFASVFVSPEVDDDVDIDINPADLRVDVYRASGAGGQHVNRTESA 249 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+P+G+VVQCQQ+RSQHKN+A A L++KL+ELE+QKR + A E +K++IGWG Sbjct: 250 VRITHMPSGIVVQCQQDRSQHKNRATAMKQLKSKLFELEMQKRRDEAEAVEGTKSDIGWG 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 310 NQIRSYVL-DQSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLKA 352 >gi|311693658|gb|ADP96531.1| peptide chain release factor 2 [marine bacterium HP15] Length = 351 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 183/347 (52%), Positives = 244/347 (70%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GG+FD+D +RL + + E P +W + A+ L +ER L+ + I + L Sbjct: 4 LKRSGGIFDYDQRSERLIEVERELEQPSVWDDPERAQALGKERADLELIVKTIDNLTSGL 63 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LL++A EE+D + E +L+ + E+E +F + SGE D+N+AYL++ AG+G Sbjct: 64 EDAEGLLDIAAEEEDEGTVAEIESDLEGLDKELEKLEFRRMFSGEMDANNAYLDIQAGSG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWANMLLRMY RWAE+R FK E +E+ +GE AGIKSAT+ I+G AYGWL+ E G Sbjct: 124 GTEAQDWANMLLRMYLRWAERRGFKAEIVELMEGEVAGIKSATIHIQGDYAYGWLRTETG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN T Sbjct: 184 VHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVR+TH PTG+VV CQ RSQH+NK QA L+AKL+E E+Q+R E +K +I Sbjct: 244 ESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADI 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E ++ VLDGD+D F++A+L + Sbjct: 304 GWGSQIRSYVLDDS-RIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349 >gi|258517064|ref|YP_003193286.1| peptide chain release factor 2 [Desulfotomaculum acetoxidans DSM 771] gi|257780769|gb|ACV64663.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfotomaculum acetoxidans DSM 771] Length = 366 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 172/353 (48%), Positives = 234/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS ++ L D + L+ P W + +A+ + R++ L +++S E Sbjct: 11 ELSGRVADLRVSLDIAGKESEIEKLDKLMMAPGFWDDQAQAQKISRQQAVLKDSVSLYGE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D +L ELA EEDD L+ET+ +L++++L V + + LLSGE D +A + + Sbjct: 71 LRQSLEDLEVLAELAQEEDDDIALRETAKDLKQLELRVSELELDVLLSGEYDRGNAIISL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW MLLRM+TRWAE +++ L++ G+EAGIKS T+ I GPNA+G+L Sbjct: 131 HAGAGGTEAQDWVEMLLRMFTRWAEDHRYRVIVLDMLSGDEAGIKSVTVEIVGPNAFGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+ RRHTSF+S+ V P VD+ ++IEI D +IDT+RA GAGGQ Sbjct: 191 KSEKGVHRLVRISPFDTAGRRHTSFASVEVLPEVDEDVDIEIKTEDLKIDTFRAGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+PTG+VV CQ ERSQ N+ A +L+AKL ELELQK+E Sbjct: 251 HVNKTDSAVRITHLPTGIVVSCQNERSQLSNRNSAMKLLKAKLAELELQKKEAEMASLRG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIRSYV PY +VKD RT E + V++G+LD FM A L + Sbjct: 311 DHQEIAWGSQIRSYVFHPYSLVKDHRTGAETGNIEAVMNGELDKFMAAFLLWQ 363 >gi|217962667|ref|YP_002341241.1| peptide chain release factor 2 [Bacillus cereus AH187] Length = 380 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIEI D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|331701705|ref|YP_004398664.1| peptide chain release factor 2 [Lactobacillus buchneri NRRL B-30929] gi|329129048|gb|AEB73601.1| Peptide chain release factor 2 [Lactobacillus buchneri NRRL B-30929] Length = 373 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 158/353 (44%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + ++ G D D + ++ +K +P W + A+ L+ + L Sbjct: 14 EMQKAIDGFGRSLDLDALSESIAINESKMAEPGFWDDQEAAQKLIDQTNQLKTKRDNFVG 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++++L D + LEL E+ + E + +++K +++ Q LL+G+ D N+A LE+ Sbjct: 74 LKNKLDDLKVTLELIEEDSHSGMEGEFETDEKQLKTKLDRYQLNLLLNGKYDHNNAILEI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTE+QDW +MLLRMYTRWAE F + L+ G+ AG+ S +LLI G NAYG+L Sbjct: 134 HPGAGGTEAQDWGSMLLRMYTRWAEAHGFTVQTLDYQVGDVAGLNSVSLLISGENAYGYL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G+HRLVR+SP+DS RRHTSF+S+ V P ++D + I+I+ D RID YR+SGAGGQ Sbjct: 194 RSEKGIHRLVRLSPFDSAGRRHTSFASVDVMPELNDDVSIDINPDDLRIDVYRSSGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T SAVRITH+PTG+V Q +RSQ +N+ A NML++KLYELE +K+ E E Sbjct: 254 HINKTSSAVRITHLPTGIVAASQAQRSQLQNRQTAMNMLKSKLYELEEEKKAEEKAKIEG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IGWG QIRSYV PY MVKD RTN E + + V+DGDLD F+ A L + Sbjct: 314 EQKDIGWGSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 366 >gi|56697430|ref|YP_167798.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3] gi|56679167|gb|AAV95833.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3] Length = 375 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 200/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N + EDP+LW N A+ LMRERQ L +A+ K I Sbjct: 12 IQKSLRLLAQRMDQETAQHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL EDD ++++ L+ ++ K+ E+LL GEAD ND +LE++ Sbjct: 72 ETDLADNIELIELGEMEDDQDVIKDAEAALKALRERAAEKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E G+EAGIKSA I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYD+ ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY+ EL +R N + Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVLQPYQMVKDLRT E + VLDG LD FM ATLA+K Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGHETSDTKGVLDGALDGFMAATLAMK 362 >gi|295707157|ref|YP_003600232.1| peptide chain release factor 2 [Bacillus megaterium DSM 319] gi|294804816|gb|ADF41882.1| peptide chain release factor 2 [Bacillus megaterium DSM 319] Length = 326 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 169/323 (52%), Positives = 219/323 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E L +A++ + + + + EL EE D + +E Sbjct: 1 MSDPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKEEYDEDLAEELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ Sbjct: 61 SELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +D I I+I D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 DIMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML++KLY+LE++K++E + +IGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + V+DGDLD F+ A L Sbjct: 301 TEVGNTQSVMDGDLDPFIDAYLR 323 >gi|254804065|ref|YP_003082286.1| peptide chain release factor 2 [Neisseria meningitidis alpha14] gi|254667607|emb|CBA03375.1| peptide chain release factor 2 [Neisseria meningitidis alpha14] gi|254673936|emb|CBA09720.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha275] gi|309379815|emb|CBX21591.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|325143543|gb|EGC65864.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013] gi|325207035|gb|ADZ02488.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196] Length = 367 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|121603978|ref|YP_981307.1| peptide chain release factor 2 [Polaromonas naphthalenivorans CJ2] gi|120592947|gb|ABM36386.1| bacterial peptide chain release factor 2 (bRF-2) [Polaromonas naphthalenivorans CJ2] Length = 347 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 166/342 (48%), Positives = 240/342 (70%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ ++L+ +N EDP +W N A+ L RE++ L++ + + ++ L DN Sbjct: 4 GGIFDYPAKARKLNEVNAALEDPKVWDNPKRAQELGREKKSLEDVVLILDRLEQELSDNT 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E++ +++D + ++ ++ EVE +F + + AD + +L++ AGAGGTE+ Sbjct: 64 ELFEMSKDDNDEAGMRAIEGEAAKVAAEVEKMEFRRMFNNPADPLNCFLDIQAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++AE++ FKT + G+ AGIK AT+ I+G A+G L+ E GVHRL Sbjct: 124 CDWASMLLRQYLKYAERKGFKTTIEDESAGDTAGIKGATIKIEGEYAFGLLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP +DDSIEI+I+ +D R DTYRASGAGGQH+N TDSAV Sbjct: 184 VRKSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VVQCQ+ RSQH N+ AW LR++LY+ EL+K++E E +KT++GWG Sbjct: 244 RLTHIPTGIVVQCQEGRSQHGNRDVAWKRLRSRLYDFELRKQQEAQQKLEDTKTDVGWGH 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN E ++ VLDGDLD F++A+L Sbjct: 304 QIRSYVL-DNSRIKDLRTNYETSATQKVLDGDLDPFIEASLK 344 >gi|126667155|ref|ZP_01738129.1| peptide chain release factor 2 [Marinobacter sp. ELB17] gi|126628311|gb|EAZ98934.1| peptide chain release factor 2 [Marinobacter sp. ELB17] Length = 351 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 183/347 (52%), Positives = 245/347 (70%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GG+FD+D +RL+ + + E P +W++ A+ L +ER L+ +S I + L Sbjct: 4 LKRSGGIFDYDQRSERLTEVERELEMPSVWEDPERAQSLGKERSDLELIVSTIDRLTSGL 63 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLE+A+EEDD + + + ++L + +E +F + SGE D N+AYL++ AG+G Sbjct: 64 TDAEGLLEMAVEEDDEATVADIGNDLAEMDANLEKLEFRRMFSGEMDPNNAYLDIQAGSG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW NMLLRMY RWAE+R FK E +E+ +GE AGIKSATL I+G A+GWL+ E G Sbjct: 124 GTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAGIKSATLHIQGDYAFGWLRTETG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSFSS++V P VDDS IEI+ +D R+D YRASGAGGQHVN T Sbjct: 184 VHRLVRKSPFDSGNRRHTSFSSVFVAPEVDDSFVIEINPADLRVDVYRASGAGGQHVNRT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVR+TH PTG+VV CQ RSQH+NK QA L+AKL+E E+Q R E SK++I Sbjct: 244 ESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEHEMQARNAEKQKLEDSKSDI 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E ++ VLDGD+D F++A+L + Sbjct: 304 GWGSQIRSYVLDDS-RIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349 >gi|237807749|ref|YP_002892189.1| peptide chain release factor 2 [Tolumonas auensis DSM 9187] gi|259585231|sp|C4LCN9|RF2_TOLAT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|237500010|gb|ACQ92603.1| hypothetical protein Tola_0975 [Tolumonas auensis DSM 9187] Length = 365 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 169/351 (48%), Positives = 232/351 (66%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G D+D +RL ++ + E P +W A+ L +ER L++ ++ I Sbjct: 13 ELSERTELLRGYLDYDAKKERLEEVSAELEQPEVWNEPERAQALGKERSALESVVATIDV 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D +L+ LA+E +D E ++ ++ +F + SG+ D++D Y+++ Sbjct: 73 LTQGAEDVEMLVSLAVEGEDEETFHEAETEADALEKKLVDLEFRRMFSGQHDASDCYMDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWA+M+LRMY RW E +K E +E DG+ AGIKSAT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWADMVLRMYLRWGEAHGYKPELIECSDGDVAGIKSATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSF S +VYP +D+ +EIEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSAFVYPEIDEDVEIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPT V QCQ +RSQHKNK QA L+AKLYELE+ K+ E Sbjct: 253 HVNRTESAVRITHIPTNTVTQCQNDRSQHKNKDQAMKQLKAKLYELEMMKQNAEKQALEE 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 TKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLDKFIEASLK 362 >gi|267847202|gb|ACJ79637.2| peptide chain release factor 2, programmed frameshift [Bacillus cereus AH187] Length = 380 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLYLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIEI D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|325135363|gb|EGC57984.1| peptide chain release factor 2 [Neisseria meningitidis M0579] gi|325208983|gb|ADZ04435.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33] Length = 367 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ATGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|224552865|gb|ACN55074.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. 'Ames Ancestor'] Length = 365 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G D ++++ L K W + A+ ++ E L + + ++ Sbjct: 12 KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N A LE+ Sbjct: 72 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 364 >gi|294501808|ref|YP_003565508.1| peptide chain release factor 2 [Bacillus megaterium QM B1551] gi|294351745|gb|ADE72074.1| peptide chain release factor 2 [Bacillus megaterium QM B1551] Length = 326 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 169/323 (52%), Positives = 219/323 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E L +A++ + + + + EL EE D + +E Sbjct: 1 MADPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKEEYDEDLAEELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ Sbjct: 61 SELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +D I I+I D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 DIMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML++KLY+LE++K++E + +IGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + V+DGDLD F+ A L Sbjct: 301 TEVGNTQSVMDGDLDPFIDAYLR 323 >gi|59802262|ref|YP_208974.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090] gi|194099790|ref|YP_002002925.1| peptide chain release factor 2 [Neisseria gonorrhoeae NCCP11945] gi|239999963|ref|ZP_04719887.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02] gi|240013088|ref|ZP_04720001.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI18] gi|240017657|ref|ZP_04724197.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA6140] gi|240081863|ref|ZP_04726406.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19] gi|240114140|ref|ZP_04728630.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11] gi|240116780|ref|ZP_04730842.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18] gi|240119007|ref|ZP_04733069.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1] gi|240122278|ref|ZP_04735240.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID24-1] gi|240122455|ref|ZP_04735411.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332] gi|240126695|ref|ZP_04739581.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679] gi|240127168|ref|ZP_04739829.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035] gi|254493466|ref|ZP_05106637.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291] gi|260441572|ref|ZP_05795388.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2] gi|268595771|ref|ZP_06129938.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02] gi|268597961|ref|ZP_06132128.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19] gi|268600216|ref|ZP_06134383.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11] gi|268602456|ref|ZP_06136623.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18] gi|268604723|ref|ZP_06138890.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1] gi|268681042|ref|ZP_06147904.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332] gi|268685277|ref|ZP_06152139.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679] gi|268685523|ref|ZP_06152385.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035] gi|291044943|ref|ZP_06570652.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2] gi|293398016|ref|ZP_06642222.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62] gi|75432344|sp|Q5F5H5|RF2_NEIG1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|238693228|sp|B4RQU4|RF2_NEIG2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|59719157|gb|AAW90562.1| putative peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090] gi|193935080|gb|ACF30904.1| PrfB [Neisseria gonorrhoeae NCCP11945] gi|226512506|gb|EEH61851.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291] gi|268549160|gb|EEZ44578.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02] gi|268551749|gb|EEZ46768.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19] gi|268584347|gb|EEZ49023.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11] gi|268586587|gb|EEZ51263.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18] gi|268588854|gb|EEZ53530.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1] gi|268621326|gb|EEZ53726.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332] gi|268625561|gb|EEZ57961.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679] gi|268625807|gb|EEZ58207.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035] gi|291011837|gb|EFE03833.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2] gi|291611962|gb|EFF41031.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62] gi|317165260|gb|ADV08801.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107] Length = 367 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +E + L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKESKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+A+EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMAVEENDEEGFAAVKEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|83311912|ref|YP_422176.1| peptide chain release factor 2 [Magnetospirillum magneticum AMB-1] gi|123541518|sp|Q2W3F8|RF2_MAGMM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|82946753|dbj|BAE51617.1| Protein chain release factor B [Magnetospirillum magneticum AMB-1] Length = 371 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 216/352 (61%), Positives = 263/352 (74%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L +WD A+ RL LN E+P LW + A+ +MRER LD+AI + + Sbjct: 12 IRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNELDSAIQGCRAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L+EL E D +++ + + ++ +K + E+LLSGEAD ND Y+E++ Sbjct: 72 ERELADLAELIELGEMEGDQTVIDDAEEQVRALKERAAKMELETLLSGEADHNDCYMEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA MLLRMYTRWAEK +K E LE GE+AGIKSAT+ I G NAYGWLK Sbjct: 132 AGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESAGEQAGIKSATIRILGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS WVYPV+DD+I+I+I+ES+CRIDTYRASGAGGQH Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFSSAWVYPVIDDTIDIQINESECRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE A E Sbjct: 252 INKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363 >gi|259046384|ref|ZP_05736785.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175] gi|259036929|gb|EEW38184.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175] Length = 361 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 161/349 (46%), Positives = 227/349 (65%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 +L+ +GGLFD D + ++ + +P W + +A ++++ L + +++ Sbjct: 2 SKLSAIGGLFDLDRLEEDIAAYEQEMSEPSFWDDSEKANQVIQKNNELKSIYDTFHKMEL 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + +L E+ EE D + E + +Q ++ +++ + LL+G D N A LE+H G Sbjct: 62 AHEETSLLFEMYKEEPDEEVHAEIVEAIQSLEKDLQRYELSMLLNGPHDKNSAILEIHPG 121 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTESQDW +MLLRMY RWAEK ++ E ++ DG+EAGIKS TL I+G NAYG+L+ E Sbjct: 122 AGGTESQDWGSMLLRMYMRWAEKHGYRVETVDYQDGDEAGIKSVTLSIEGLNAYGYLRSE 181 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +GVHRLVRISP+D+ +RHTSF S+ V P +D I+IEI+ D ++D YRASGAGGQH+N Sbjct: 182 KGVHRLVRISPFDAAGKRHTSFCSVDVVPQMDGDIDIEINPDDLKVDVYRASGAGGQHIN 241 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVRITHIPTG+V Q Q +RSQ KN+ QA ML+AKL++LE +K+ + Sbjct: 242 KTSSAVRITHIPTGIVTQSQAQRSQFKNRDQAMAMLKAKLFQLEEEKKAAELAAIRGEQK 301 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +I WG QIR+YV PY MVKDLR+ E + V+DGDLD FM A L Sbjct: 302 DIAWGSQIRNYVFHPYSMVKDLRSGYETGNIGAVMDGDLDSFMDAYLKW 350 >gi|283777745|ref|ZP_06344221.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus NVH0597-99] gi|283645392|gb|EFC27417.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus NVH0597-99] Length = 380 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIEI D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|258421538|ref|ZP_05684463.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9719] gi|258423403|ref|ZP_05686294.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9635] gi|257842464|gb|EEV66888.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9719] gi|257846464|gb|EEV70487.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9635] Length = 352 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 166/344 (48%), Positives = 224/344 (65%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD +N + +P+ W N +A+ ++ + L ++ K +Q + D Sbjct: 3 LGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDM 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +L EE D + ++ + K +V+ + + LL G D+N+A LE+H GAGGTE Sbjct: 63 DATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHR Sbjct: 123 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 LVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH+N T+S Sbjct: 183 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ + EIGW Sbjct: 243 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGW 302 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 303 GSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 346 >gi|160876721|ref|YP_001556037.1| peptide chain release factor 2 [Shewanella baltica OS195] gi|160862243|gb|ABX50777.1| peptide chain release factor 2 [Shewanella baltica OS195] Length = 352 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 174/343 (50%), Positives = 233/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E +W + A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 349 >gi|222148341|ref|YP_002549298.1| peptide chain release factor 2 [Agrobacterium vitis S4] gi|221735329|gb|ACM36292.1| peptide chain release factor 2 [Agrobacterium vitis S4] Length = 344 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 230/329 (69%), Positives = 280/329 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 LN K EDP+LW + EA+ LMRERQ L+++I+ ++ ++ ++ DN+ L+E+ EE D SI+ Sbjct: 4 LNNKAEDPNLWNDAAEAQKLMRERQQLEDSIAGVRRLEQQMKDNIELIEMGEEEGDESIV 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E D L+ +K E Q E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 64 KEAEDGLKALKAESGKLQVEAMLSGEADGNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ FK E LE+HDGEEAGIKSAT+L+KG NAYGW+K E GVHRLVRISPYDSN+RRHTS Sbjct: 124 ERSGFKVELLEVHDGEEAGIKSATILVKGHNAYGWMKTESGVHRLVRISPYDSNARRHTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIP+G+ V CQQ Sbjct: 184 FSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPSGIAVSCQQ 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKNKA+AW+MLRA+LYE+EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 244 ERSQHKNKAKAWDMLRARLYEVELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 303 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT +E T+P DVL+GD+ FM+A LA + Sbjct: 304 LRTGVESTAPDDVLNGDISPFMEAALAHR 332 >gi|121635783|ref|YP_976028.1| peptide chain release factor 2 [Neisseria meningitidis FAM18] gi|261378556|ref|ZP_05983129.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685] gi|304388773|ref|ZP_07370830.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC 13091] gi|166225113|sp|A1KWK6|RF2_NEIMF RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|120867489|emb|CAM11266.1| peptide chain release factor 2 [Neisseria meningitidis FAM18] gi|254671300|emb|CBA08663.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha153] gi|261393453|emb|CAX51098.1| peptide chain release factor II (RF-2) [Neisseria meningitidis 8013] gi|269145108|gb|EEZ71526.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685] gi|304337265|gb|EFM03442.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC 13091] gi|308390220|gb|ADO32540.1| peptide chain release factor 2 [Neisseria meningitidis alpha710] gi|325131224|gb|EGC53936.1| peptide chain release factor 2 [Neisseria meningitidis M6190] Length = 367 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|218767251|ref|YP_002341763.1| peptide chain release factor 2 [Neisseria meningitidis Z2491] gi|24638158|sp|Q9JWV4|RF2_NEIMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|121051259|emb|CAM07534.1| peptide chain release factor 2 [Neisseria meningitidis Z2491] gi|319411456|emb|CBY91871.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE 2594] Length = 367 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ATGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|295689553|ref|YP_003593246.1| hypothetical protein Cseg_2164 [Caulobacter segnis ATCC 21756] gi|295431456|gb|ADG10628.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756] Length = 373 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 209/352 (59%), Positives = 255/352 (72%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L DWD A+++L LN + EDP LW EA+ + RER L + ++ I Sbjct: 12 IEQSVGLLRRRLDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERAALAAKVEAVQSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D + ELA E D L + L+ +K + E+LLSGEAD NDAY+E++ Sbjct: 72 ERDLKDAVEYAELADMEGDEESLNDARVQLKALKDRAGRAELEALLSGEADGNDAYIEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA +LLRMYTRWA +TE +E DG++AGIKSATLL+KGPNAYGWLK Sbjct: 132 SGAGGTESCDWAGILLRMYTRWANAHGMQTELIEETDGDQAGIKSATLLVKGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIEI+ +D R DTYRASGAGGQH Sbjct: 192 TEAGVHRLVRISPYDSSARRHTSFASAWVYPVVDDTIEIEINPADVRTDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+ V CQ RSQH+N+ +AW MLRA+LYE ELQKRE E Sbjct: 252 INKTDSAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGAALAQR 363 >gi|163739752|ref|ZP_02147160.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107] gi|163741027|ref|ZP_02148420.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10] gi|161386018|gb|EDQ10394.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10] gi|161386982|gb|EDQ11343.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107] Length = 374 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 202/351 (57%), Positives = 251/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L DW+ A RL N + EDP+LW + A+ LMR+RQ L +AI K I Sbjct: 12 IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRDRQMLVDAIDTYKSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL E+D ++ + L+ +K + K+ E+LL GEADSND +LE++ Sbjct: 72 KQDLSDNMELIELGEMEEDAEVISDAEAALKTLKEKAAEKELEALLDGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 252 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNADINAAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|282908140|ref|ZP_06315971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910399|ref|ZP_06318203.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282325791|gb|EFB56099.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282327805|gb|EFB58087.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WW2703/97] Length = 352 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 166/344 (48%), Positives = 224/344 (65%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD +N + +P+ W N +A+ ++ + L ++ K +Q + D Sbjct: 3 LGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDM 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +L EE D + ++ + K +V+ + + LL G D+N+A LE+H GAGGTE Sbjct: 63 DATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHR Sbjct: 123 SQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 LVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH+N T+S Sbjct: 183 LVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTES 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ + EIGW Sbjct: 243 AIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGW 302 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 303 GSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 346 >gi|145297980|ref|YP_001140821.1| peptide chain release factor 2 [Aeromonas salmonicida subsp. salmonicida A449] gi|166223622|sp|A4SJK1|RF2_AERS4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|142850752|gb|ABO89073.1| peptide chain release factor 2 [Aeromonas salmonicida subsp. salmonicida A449] Length = 365 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 176/351 (50%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G FD+D +RL +N + E P +W A+ L +ER L+N + I Sbjct: 13 ELSERTELLRGYFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVSLENVVGTIDV 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D +L+ LA+E +D E ++ ++ +F + SG+ D +D Y+++ Sbjct: 73 LTQGAEDVEMLVSLAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDGSDCYIDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW + +K E +E+ DG+ AGIKSAT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIELSDGDVAGIKSATVKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q L+AKLYELE+QK+ E Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 TKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362 >gi|85702878|ref|ZP_01033982.1| peptide chain release factor 2 [Roseovarius sp. 217] gi|85671806|gb|EAQ26663.1| peptide chain release factor 2 [Roseovarius sp. 217] Length = 375 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 199/352 (56%), Positives = 247/352 (70%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L W+ A RL N + EDP LW + A+ LMRERQ L +A+ Sbjct: 11 EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQSLMRERQALVDALDTHDS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L DNL L+EL E+D ++ E ++ + K+ E+LL GEADSND +LE+ Sbjct: 71 LKQELEDNLGLIELGEMENDTEVVSEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEKR + E GEEAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV Q +SQH+N+ A L+++LY+ EL +R N Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQQELDRRNAAINEAHD 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD+FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361 >gi|254454841|ref|ZP_05068278.1| peptide chain release factor 2 [Octadecabacter antarcticus 238] gi|198269247|gb|EDY93517.1| peptide chain release factor 2 [Octadecabacter antarcticus 238] Length = 375 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 192/353 (54%), Positives = 251/353 (71%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L+ L +WD A RL N + EDP LW + A+ LMR+RQ L +AI+ + Sbjct: 11 EIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPDAAQKLMRDRQSLVDAIASYEA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D++ L+E+ EDD ++ E D L+ + + K+ E+LL+GEAD+ND +LE+ Sbjct: 71 IRQELSDHVELIEMGEMEDDAGVVTEAEDGLKVLAAKAAEKELEALLNGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTE+ DWA ML RMY RWAE++ +K E GEE GIKSA+ I G NAYGWL Sbjct: 131 NSGAGGTEACDWAAMLARMYVRWAERKGYKVELQSESAGEEVGIKSASYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++E+ KR + N Sbjct: 251 HVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIEMDKRSALVNEVHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAMD 362 >gi|161871001|ref|YP_001600181.1| peptide chain release factor 2 [Neisseria meningitidis 053442] gi|161596554|gb|ABX74214.1| peptide chain release factor 2 [Neisseria meningitidis 053442] Length = 352 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 1 MEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 61 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 121 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 181 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 241 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 301 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 349 >gi|261401531|ref|ZP_05987656.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970] gi|269208367|gb|EEZ74822.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970] Length = 367 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVKEDVVGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|295676932|ref|YP_003605456.1| hypothetical protein BC1002_1882 [Burkholderia sp. CCGE1002] gi|295436775|gb|ADG15945.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 367 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 176/350 (50%), Positives = 249/350 (71%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + L G D+D+ RL +N + EDP +W + A+ L +E++ LD+ + + I Sbjct: 16 LRKRADDLRGYLDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L ++A EE D L + Q I+ V +F + + AD N+A+L++ Sbjct: 76 TNDVNDAQDLFDMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE +G+ AGIK+AT+ I+G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEISNTKSVLDGDLDPFISASLK 364 >gi|302342486|ref|YP_003807015.1| LigA [Desulfarculus baarsii DSM 2075] gi|301639099|gb|ADK84421.1| LigA [Desulfarculus baarsii DSM 2075] Length = 371 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 174/353 (49%), Positives = 235/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L + D ++ +RL+ L+ W++ AK +MRER L ++ + Sbjct: 7 ELRQRLGVIQEYLDPESKTKRLAELDKIVGANDFWEDQNAAKAVMRERTDLAQSLEELDA 66 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D +LLELA+EEDD S+ E ++ ++ + LL G D A L + Sbjct: 67 LNRSMEDAEVLLELAVEEDDASLTAEIDQAHDALERQIGRLEAARLLGGPDDHRGAILAI 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGG ++QDWA ML R+Y R+AE++ F+ L+ G+EAG+KS T+ I GP AYG L Sbjct: 127 NAGAGGADAQDWAQMLTRLYGRYAERQGFQVVELDFQAGDEAGVKSVTMEINGPRAYGLL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D++ RRHT+F+S++V P VDD IEIE+ ++D RIDTYRASGAGGQ Sbjct: 187 KGESGVHRLVRISPFDASHRRHTAFASVYVSPQVDDDIEIEVKDADIRIDTYRASGAGGQ 246 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVRITH PTGVVVQCQ E+SQH+NK A +LRA+LYELE+ KRE + Sbjct: 247 HVNKTSSAVRITHFPTGVVVQCQNEKSQHRNKDMAMKVLRARLYELEIHKREAEKREVHA 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S EI WG QIRSYVL PY++VKD RT +E + VLDG LDDF++ L + Sbjct: 307 SHQEIAWGSQIRSYVLAPYRLVKDHRTGVEVGNVDSVLDGQLDDFIQGYLLWR 359 >gi|261365043|ref|ZP_05977926.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996] gi|296313763|ref|ZP_06863704.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768] gi|288566638|gb|EFC88198.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996] gi|296839690|gb|EFH23628.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768] Length = 367 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 172/350 (49%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|255066677|ref|ZP_05318532.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256] gi|255049005|gb|EET44469.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256] Length = 367 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAELEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|238916331|ref|YP_002929848.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750] gi|238871691|gb|ACR71401.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750] Length = 372 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 230/350 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + + D DN +R+ L E P W N +++ M+E + L +A E++ Sbjct: 15 DKPMAQIKKSLDLDNKQKRIEELEADMEAPGFWDNPDKSQNAMKELKGLKDAFERYNELE 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L+E+A E +D S++ E + + ++ ++E + E+LLSGE D+ DA L +HA Sbjct: 75 TGLDDVKTLIEMAEESNDQSLIPEIEEEITNLEDKMESLRIETLLSGEHDACDAILTLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DW ML RMYTRWAE + TE L+ +GEEAGIKS T+ I+G NAYG LK Sbjct: 135 GAGGTESCDWCQMLFRMYTRWAESHGYTTETLDYLEGEEAGIKSVTIEIRGENAYGHLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+++ +R TSF S V P ++ I+IEI++ D RIDTYR+SGAGGQH+ Sbjct: 195 EHGVHRLVRISPFNAAGKRQTSFVSCDVMPDINQDIDIEINDDDLRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITH+PTG+VVQCQ ERSQH+NK +A ML+AKLY L+ + E + Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKEAENAENLSGIRGDV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +I +G QIRSYVLQPY MVKD RTN E + VLDG++D F+ A L Sbjct: 315 KDINFGSQIRSYVLQPYTMVKDNRTNKEVANAGSVLDGNIDPFINAYLTW 364 >gi|89094633|ref|ZP_01167570.1| peptide chain release factor 2, programmed frameshift [Oceanospirillum sp. MED92] gi|89081103|gb|EAR60338.1| peptide chain release factor 2, programmed frameshift [Oceanospirillum sp. MED92] Length = 364 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L G D++ +RL ++ + EDP +W + A+ L +ER L+ + I ++ Sbjct: 13 IKERTEALRGFLDYETKQERLEEVSRELEDPAVWDDPENAQKLGKERSTLEAVVGTIDDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LL++A+EEDD + E ++ + ++ +F + +GEAD N+A+L++ Sbjct: 73 TAGVADTRDLLDMAVEEDDEDTVAEVESDVTAMLDRLQQLEFRRMFAGEADPNNAFLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA M+LRMY RW E + FKTE LE G+ AGIKSAT+ +G A+GWL+ Sbjct: 133 AGSGGTEAQDWAEMMLRMYLRWGEDKGFKTELLECSAGDVAGIKSATISFQGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS++V P +DD+I+IEI+ +D R+D YRASGAGGQH Sbjct: 193 TETGVHRLVRKSPFDSGGRRHTSFSSVFVSPEIDDNIDIEINPADLRVDVYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH P+G+VVQ Q +RSQH+NK LRAKLYE+E+ KR E A E + Sbjct: 253 VNRTESAVRITHEPSGIVVQSQAQRSQHQNKDTCMKQLRAKLYEVEMLKRTEAAQEQEDN 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +IGWG QIRSYVL Q +KDLRT ++ ++ VLDGDLD F++A+L Sbjct: 313 KADIGWGSQIRSYVLDD-QRIKDLRTGVQSSNCDKVLDGDLDMFIEASLKA 362 >gi|308048394|ref|YP_003911960.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas balearica DSM 9799] gi|307630584|gb|ADN74886.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas balearica DSM 9799] Length = 365 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 187/351 (53%), Positives = 245/351 (69%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G D+D +RL +N + E P +W A+ L RER +L+ + I + Sbjct: 13 ELSERTELLRGYLDYDAKQERLEEVNAELEQPDVWNEPERAQELGRERSNLEAVVKTIND 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LL+LA+EE D +E L+ ++ ++E +F + SG D+NDAYL++ Sbjct: 73 LDQGLEDVRELLDLAVEEQDEESFEEAKAELEGLEAQLEKLEFRRMFSGAQDANDAYLDL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDW N+LLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G A+GWL Sbjct: 133 QAGSGGTEAQDWCNILLRMYLRWAEAKGFKAEIIEVSEGEVAGLKSATVKISGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRITH+PT VVQCQ ERSQHKNK QA L+AKL+ELE+QK+ E Sbjct: 253 HVNTTESAVRITHMPTNTVVQCQNERSQHKNKDQAMKQLKAKLFELEMQKQNAEKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDRFIEASLK 362 >gi|297544050|ref|YP_003676352.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841825|gb|ADH60341.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 368 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 234/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ ++ +G D + + + ++ + DP W ++ +++ L + ++ L + Sbjct: 11 KMFEEIKEMGVSLDIEGVKREIEEIDKEMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL LEE D SI +E + +K ++E + ++LL+G D N+A L + Sbjct: 71 LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GGTE+QDWA MLLRMYTRWA + F E L+ GEEAGIKS TL+IKGP AYG+L Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+ + V P ++D IE+EI D RIDTYRASGAGGQ Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIRSYV QPY +VKD RTN E + V+DG++DDF+ A L K Sbjct: 311 EHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363 >gi|121608134|ref|YP_995941.1| peptide chain release factor 2 [Verminephrobacter eiseniae EF01-2] gi|121552774|gb|ABM56923.1| bacterial peptide chain release factor 2 (bRF-2) [Verminephrobacter eiseniae EF01-2] Length = 381 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 163/345 (47%), Positives = 238/345 (68%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +RL ++ +DP +W + +A+ L +E++ LD+ +S + ++ L Sbjct: 35 KNYGGIFDYDAKFERLRTVDAALQDPAVWNDPKKAQALGKEKKSLDDVVSMLDKLGRELA 94 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 DN L E++ +E D + L R++ +E +F + S EAD+ + ++++ AGAGG Sbjct: 95 DNTELFEMSKQEGDDAGLLALQAEAARLRPGIEQLEFRRMFSKEADALNCFVDIQAGAGG 154 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA MLLR Y R+AE++ FK E G+ AG+KSAT+ ++G AYG L+ E GV Sbjct: 155 TEACDWAGMLLRQYLRYAERKGFKATVEEETPGDVAGLKSATIKVEGEYAYGLLRTETGV 214 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSF+S++VYP +DDSI+I+I+ +D R DT+R+SGAGGQH+N TD Sbjct: 215 HRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTFRSSGAGGQHINKTD 274 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VVQCQ RSQH N+ AW LR++LY+ E + R++ E SKT++G Sbjct: 275 SAVRLTHLPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHERRLRQQEQQKLEDSKTDVG 334 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRT++E ++ VLDGDLD F++A L Sbjct: 335 WGHQIRSYVL-DNSRIKDLRTHVEISATQKVLDGDLDAFIEAALK 378 >gi|94495879|ref|ZP_01302458.1| protein chain release factor B [Sphingomonas sp. SKA58] gi|94424571|gb|EAT09593.1| protein chain release factor B [Sphingomonas sp. SKA58] Length = 377 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 210/353 (59%), Positives = 263/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L L DWD A++RL LN + EDP LW N +A+ +MRER LD+AI + Sbjct: 13 RIDAALALLRQSLDWDRALRRLDELNARVEDPTLWDNAKQAQEVMRERTRLDSAIGATRA 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D L+E+A E D ++ E L+ + + + ++LL+GEADS D YLE+ Sbjct: 73 IEAEKSDTAELIEMAEAEGDEGMVDEAVAALKALADRADEDKIKALLAGEADSYDTYLEI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R +K E ++ G++AGIKSAT L+KG NAYG+ Sbjct: 133 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLMKGENAYGYA 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD I+IE+ ESD +IDTYRASGAGGQ Sbjct: 193 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIDIEVKESDLKIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G++V Q +RSQHKN+A A NML+A+LYE EL++REE A+ Sbjct: 253 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASSDYQ 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG LD FM A L+ K Sbjct: 313 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 365 >gi|294668116|ref|ZP_06733223.1| peptide chain release factor 2 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309824|gb|EFE51067.1| peptide chain release factor 2 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 367 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 172/350 (49%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|91794477|ref|YP_564128.1| peptide chain release factor 2 [Shewanella denitrificans OS217] gi|91716479|gb|ABE56405.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella denitrificans OS217] Length = 352 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 177/343 (51%), Positives = 232/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+ N +RL ++ + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYANKKERLEEVSLELESSAVWNEPERAQALGKERSALEAVVKTIDDLDSGLEDI 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+EEDD E S L ++ +E +F + SG DS D YL++ +G+GGTE Sbjct: 68 EGLVELAIEEDDEDTFNEASAELDELERRLEDLEFRRMFSGPNDSADCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ S+ RIDTYRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPSELRIDTYRASGAGGQHVNKTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ RSQHKNK A L+AKLYELE+ K+ E +K++IGWG Sbjct: 248 IRITHLPTNTVVQCQSGRSQHKNKDSAMKQLKAKLYELEMMKQNVDKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVENRNTQTVLDGDLDKFIEASLK 349 >gi|218906362|ref|YP_002454196.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus AH820] gi|218540032|gb|ACK92430.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus AH820] Length = 380 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|332185456|ref|ZP_08387204.1| peptide chain release factor 2 [Sphingomonas sp. S17] gi|332014434|gb|EGI56491.1| peptide chain release factor 2 [Sphingomonas sp. S17] Length = 375 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 215/352 (61%), Positives = 274/352 (77%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ L L DWD A++RL LN + ED LW + +A+ +MRER+ LD AI+ + I Sbjct: 12 INDALALLRRFLDWDRALRRLDELNARVEDQALWNDPKQAQAVMRERRRLDEAITATRAI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L + L+ELA E D + +E +L + E + ++LL+GEAD+ND+Y+E++ Sbjct: 72 ENELSGTVELIELAEMEGDEELEKEAVTSLGDLAKRAEADKVKALLAGEADANDSYIEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA ML RMYTRWAE+R K E ++ H GE+AGIKSATLL+KG NAYG+ K Sbjct: 132 AGAGGTESQDWAGMLQRMYTRWAERRGMKVELIDYHAGEQAGIKSATLLVKGENAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPV+DD+IE+EI+ES+ RIDTYRASGAGGQH Sbjct: 192 VESGVHRLVRISPYDSAARRHTSFSSVWVYPVIDDNIEVEINESELRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+PTG+VVQCQ +RSQHKNKA+A+N LRA+LYE EL +RE +AN ++ Sbjct: 252 INTTDSAVRITHLPTGIVVQCQNQRSQHKNKAEAYNQLRARLYERELAEREAVANAENAT 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDGDLD FM A L+ + Sbjct: 312 KTDIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGDLDAFMAAALSQR 363 >gi|289577756|ref|YP_003476383.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9] gi|289527469|gb|ADD01821.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9] Length = 368 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 234/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ ++ +G D + + + ++ K DP W ++ +++ L + ++ L + Sbjct: 11 KMFEEIKEMGVSLDIEGVKREVEEIDKKMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL LEE D SI +E + +K ++E + ++LL+G D N+A L + Sbjct: 71 LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GGTE+QDWA MLLRMYTRWA + F E L+ GEEAGIKS TL+IKGP AYG+L Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+ + V P ++D IE+EI D RIDTYRASGAGGQ Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIRSYV QPY +VKD RTN E + V+DG++DDF+ A L K Sbjct: 311 EHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363 >gi|304396712|ref|ZP_07378592.1| peptide chain release factor 2 [Pantoea sp. aB] gi|304355508|gb|EFM19875.1| peptide chain release factor 2 [Pantoea sp. aB] Length = 351 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 179/344 (52%), Positives = 237/344 (68%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P++W A+ L +ER L+ + + ++ L D Sbjct: 7 FGGIFDYDAKKERLEEVNAELEQPYVWNEPERAQALGKERSSLEAIVQTLDQMSQGLEDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E +D E L ++ ++ +F + SGE DS D Y+++ AG+GGTE Sbjct: 67 QGLLELAVEAEDEETFDEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ E GVHR Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 349 >gi|254491393|ref|ZP_05104572.1| peptide chain release factor 2 [Methylophaga thiooxidans DMS010] gi|224462871|gb|EEF79141.1| peptide chain release factor 2 [Methylophaga thiooxydans DMS010] Length = 348 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 184/346 (53%), Positives = 249/346 (71%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D+ ++L + + E P +W + A+ L +ER L+ ++ + +D L Sbjct: 1 MTISGGIFDYDDKAEQLVEVTRELESPSVWDDPDRAQKLGQERASLEKIVTTLSSHRDTL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EE+D + +L ++ +E +F+ + SG+ D N AY+++ +G+G Sbjct: 61 EDAKDLLELAVEENDQETFDAITADLDELEKGLEKLEFQRMFSGKLDKNSAYIDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWAN+LLRMY RW E + +K E +E+ GE AGIKSAT+ ++G A+G L+ E G Sbjct: 121 GTEAQDWANILLRMYLRWGESQDYKVELMEVSAGEVAGIKSATIRMEGEYAFGMLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+SI+VYP VDD+IEI+I+ +D R+DTYRASGAGGQHVNTT Sbjct: 181 VHRLVRKSPFDSGARRHTSFASIFVYPEVDDTIEIDINPADLRVDTYRASGAGGQHVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSA+RITH PT +VVQCQ ERSQHKNK QA N LRAKLYELELQK+ E+ E SK++I Sbjct: 241 DSAIRITHEPTNIVVQCQNERSQHKNKDQAMNQLRAKLYELELQKQNEVKQAAEESKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 GWGSQIRSYVL-DQSRIKDLRTGVETGNTQAVLDGDLDQFIEASLK 345 >gi|146308390|ref|YP_001188855.1| peptide chain release factor 2 [Pseudomonas mendocina ymp] gi|145576591|gb|ABP86123.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas mendocina ymp] Length = 378 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 184/345 (53%), Positives = 243/345 (70%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + GG+FD+D+ RL +N + ED +W A+ L RER L + I ++ L Sbjct: 32 SQFGGIFDYDHKHDRLVEVNRELEDASVWNKPEYAQALGRERAMLAQIVETIDDLTGSLA 91 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D+ LLE+A EE+D + + ++R++ +E +F + SGE D N+ YL++ AG+GG Sbjct: 92 DSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGEMDPNNCYLDIQAGSGG 151 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ IKG A+GWL+ E GV Sbjct: 152 TEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGV 211 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 212 HRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 271 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E SK++IG Sbjct: 272 SAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIG 331 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRT +E++ VLDGDLD +++A+L Sbjct: 332 WGHQIRSYVLDDS-RIKDLRTGVERSDCQKVLDGDLDGYLEASLK 375 >gi|294142345|ref|YP_003558323.1| peptide chain release factor 2 [Shewanella violacea DSS12] gi|293328814|dbj|BAJ03545.1| peptide chain release factor 2 [Shewanella violacea DSS12] Length = 352 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 168/350 (48%), Positives = 234/350 (66%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + L GG FD+D +RL ++ + E+ +W + A+ L +ER L+ + I ++ Sbjct: 1 MQNVLLAFGGFFDYDAKKERLEEVSRELENSDVWNDPDNAQALGKERAALELIVKTIDDM 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL+LA+EE D + S L ++ +E +F + SG D ++YL++ Sbjct: 61 DTGLEDVEGLLDLAIEEGDEDTFNDASAELDDLEKRLEDLEFRRMFSGPHDIANSYLDIQ 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWANM+LRMY RW E +K E +E+ G+ AGIK AT+ G A+G L+ Sbjct: 121 SGSGGTEAQDWANMVLRMYLRWGEAHDYKPELIEVTAGDVAGIKGATIKFNGEYAFGSLR 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQH Sbjct: 181 TETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T+SA+RITH+PT VVQCQ +RSQHKN+ A L+AKL+ELE+ K+ + E + Sbjct: 241 INKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLFELEMLKQNQEKQAAEDA 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 301 KSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQTVLDGGLDMFIQASLK 349 >gi|313669297|ref|YP_004049581.1| peptide chain release factor 2 [Neisseria lactamica ST-640] gi|313006759|emb|CBN88229.1| peptide chain release factor 2 [Neisseria lactamica 020-06] Length = 367 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDQKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|319943696|ref|ZP_08017977.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599] gi|319742929|gb|EFV95335.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599] Length = 359 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 178/342 (52%), Positives = 239/342 (69%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D RL+ +N+ E P +W + A L +E++ LDN + I+++ L D Sbjct: 16 GGIFDFDEKKNRLTEVNSALEAPDIWNDAAAALELGKEKRALDNVVGTIEQLTGSLSDTR 75 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+A+ E+D + L+E I+ VE +F + S AD +LE+ AGAGGTE+ Sbjct: 76 DLYEMAVAENDDATLEELERESLGIEKGVEGLEFRRMFSNPADPGPCFLEIQAGAGGTEA 135 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA MLLR Y R+ E+R F T LE +G+ AGIK ATL ++G AYG+L+ E G+HRL Sbjct: 136 CDWAAMLLRQYLRYCERRGFTTTLLEESEGDVAGIKGATLKVEGEYAYGYLRTETGIHRL 195 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP VDDSIE++I+ +D RID YRASGAGGQHVN T+SAV Sbjct: 196 VRKSPFDSSGGRHTSFASVYVYPEVDDSIEVDINPADLRIDVYRASGAGGQHVNKTESAV 255 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQH+N+ +A MLRA+L+ELEL+KR+ + E+SKT+IGWG Sbjct: 256 RITHLPTNTVVQCQNDRSQHRNRDEAMKMLRARLFELELRKRQAEQDKVEASKTDIGWGH 315 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN E ++ VLDGDLDDF+ +L Sbjct: 316 QIRSYVL-DQSRIKDLRTNFETSNTKAVLDGDLDDFIAESLK 356 >gi|298370446|ref|ZP_06981762.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str. F0314] gi|298281906|gb|EFI23395.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str. F0314] Length = 367 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK + LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIDILEEDDGEIAGINRATIRLEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|15677951|ref|NP_275123.1| peptide chain release factor 2 [Neisseria meningitidis MC58] gi|24638159|sp|Q9JXB3|RF2_NEIMB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|7227395|gb|AAF42446.1| peptide chain release factor 2 [Neisseria meningitidis MC58] gi|316984027|gb|EFV63006.1| peptide chain release factor 2 [Neisseria meningitidis H44/76] gi|325139451|gb|EGC61991.1| peptide chain release factor 2 [Neisseria meningitidis CU385] Length = 367 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ F+ E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|149374726|ref|ZP_01892500.1| peptide chain release factor 2 [Marinobacter algicola DG893] gi|149361429|gb|EDM49879.1| peptide chain release factor 2 [Marinobacter algicola DG893] Length = 351 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 181/347 (52%), Positives = 243/347 (70%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GG+FD+D +RL+ + + E P +W++ A+ L +ER L+ + I + L Sbjct: 4 LKRSGGIFDYDQRSERLTEVERELEVPSVWEDPERAQALGKERSDLELIVRTIDNLTSGL 63 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLE+A EE+D E +L + E+E +F + SGE D+N+AYL++ AG+G Sbjct: 64 EDAEGLLEIADEEEDEGTAAEIEADLAGLDKELEKLEFRRMFSGEMDANNAYLDIQAGSG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW NMLLRMY RWAE+R FK E +E+ +G+ AGIKSAT+ I+G A+GWL+ E G Sbjct: 124 GTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGDVAGIKSATIHIQGDYAFGWLRTETG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN T Sbjct: 184 VHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVNRT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVR+TH PTG+VV CQ RSQH+NK QA L+AKL+E E+Q+R E +K +I Sbjct: 244 ESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADI 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E ++ VLDGD+D F++A+L + Sbjct: 304 GWGSQIRSYVLDDS-RIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349 >gi|304391525|ref|ZP_07373467.1| peptide chain release factor 2 [Ahrensia sp. R2A130] gi|303295754|gb|EFL90112.1| peptide chain release factor 2 [Ahrensia sp. R2A130] Length = 374 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 200/351 (56%), Positives = 262/351 (74%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++ ++ L DW+ A RL LN +EDP LW + +A++LM+ERQ L+ I+ I Sbjct: 11 EITQAISLLRRHLDWEKANTRLEELNAASEDPDLWNDPGKAQLLMKERQQLETGITSING 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L+ELA EDD +L E L+ + ++ +Q +LLSGEAD+ND Y EV Sbjct: 71 LEGDLGDTKDLIELAEMEDDADVLAEAESALRELHADLGKRQAATLLSGEADANDTYFEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+GAGGTES DWANMLLRMY RWAE +K E G+EAGIK+AT+L+KG NAYG++ Sbjct: 131 HSGAGGTESNDWANMLLRMYIRWAETNGYKVEVQATTSGDEAGIKAATVLVKGANAYGYM 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPV+DD+IEI + +++ R+DT+R+SGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSQAKRHTSFSSVWVYPVIDDNIEIIVPDNEIRLDTFRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV E+SQH+N+A A L+++LYE E+QKR E Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRANAMKALKSRLYEAEMQKRNEATQAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVLQPYQ+VKDLRT +E T+PS VLDGDL+ FM+A LA Sbjct: 310 AKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPSAVLDGDLNAFMEAALA 360 >gi|304414309|ref|ZP_07395677.1| peptide chain release factor 2 [Candidatus Regiella insecticola LSR1] gi|304283523|gb|EFL91919.1| peptide chain release factor 2 [Candidatus Regiella insecticola LSR1] Length = 344 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 1/342 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 G+FD+D +RL ++ + E P +W A+ L +ER L+ + I++++ +L D Sbjct: 2 GIFDYDVKQERLEEVSAELEQPDVWNKPEYAQQLGKERSTLEAIVLTIQQLERQLADVNG 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LL+LA+EE+D + E L+ ++ + +F + SGE DS + YL++ AG+GGTE+Q Sbjct: 62 LLDLAVEENDEATFNEVLAELKAVENNLIQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWANMLLRMY RWA+ + F+TE ++ DG+ AG+KSAT+ I G A+GWL+ E GVHRLV Sbjct: 122 DWANMLLRMYLRWADAKGFQTEIIDSSDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP +DD + IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 182 RKSPFDSGGRRHTSFSSAFVYPEIDDKVNIEINPADLRIDVYRASGAGGQHVNKTESAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Q Sbjct: 242 ITHIPTNIVTQCQNDRSQHKNKDQAMQQLKAKLYEFEMQKKNADKQLQEDNKSDIGWGSQ 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYVL +KDLRTN+E + VLDGDLD F++A+L Sbjct: 302 IRSYVLDD-ARIKDLRTNVETRNTQAVLDGDLDKFIEASLKA 342 >gi|149202750|ref|ZP_01879722.1| peptide chain release factor 2 [Roseovarius sp. TM1035] gi|149144032|gb|EDM32066.1| peptide chain release factor 2 [Roseovarius sp. TM1035] Length = 375 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 199/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L W+ A RL N + EDP LW + A+ LMRERQ L +A+ Sbjct: 11 EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQTLMRERQALVDALETHDG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I++ L DNL L+EL E D ++ E ++ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKNELEDNLGLIELGEAESDAEVVGEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEKR + E G+EAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGDEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV Q +SQH+N+ A L+++LY+LEL +R N Sbjct: 251 HVNTTDSAVRITHMPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHD 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD+FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361 >gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40] gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus degradans 2-40] Length = 347 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 179/345 (51%), Positives = 242/345 (70%), Gaps = 1/345 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 CLGG+F++ +RL+ + + +P +W + A+ L ER L+ + I+ +++ + D Sbjct: 2 CLGGIFEYAEKKERLAEVELELAEPDVWDDPARAQALGSERSSLELVVETIETLENGVAD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLE+A+EE D E R++ + +F + SGE D N+AYL++ AG+GGT Sbjct: 62 CRELLEMAIEESDEDSFLEICSEADRLEAHLATLEFRRMFSGEMDPNNAYLDIQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA MLLRMY RW E + FKT E G+ AGIKSAT+ +G A+GWL+ E GVH Sbjct: 122 EAQDWAEMLLRMYLRWGEDKGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS +RRHTSFSS++V P +DD+I+IEI+++D R DTYRASGAGGQHVN TDS Sbjct: 182 RLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIEINKADVREDTYRASGAGGQHVNKTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH PTG+VVQCQ ERSQH N+ +AW MLRA++YE E+QKR E SK++IGW Sbjct: 242 AVRLTHAPTGIVVQCQSERSQHSNRDKAWKMLRARVYEQEMQKRNAEKQALEDSKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSYVL Q +KDLRTN++ ++ + VLDG LDDF+ A+L Sbjct: 302 GSQIRSYVLDD-QRIKDLRTNVQTSNCNAVLDGKLDDFIVASLKA 345 >gi|170725301|ref|YP_001759327.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908] gi|238688657|sp|B1KFR6|RF2_SHEWM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|169810648|gb|ACA85232.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908] Length = 365 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 237/350 (67%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G+FD+D +RL ++ + E +W N A+ L +ER L+ + I ++ Sbjct: 14 LADRTLLLRGIFDYDAKKERLEEVSAELESSEVWNNPENAQALGKERSALELVVKTIDDM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D L+ELA+EE+D + S L ++ +E +F + SG D +D YL++ Sbjct: 74 DSGLEDVEGLVELAVEEEDEETFADASSELDALEKRLEELEFRRMFSGPHDISDCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWANM+LRM+ RW E +K E +E+ DG+ AGIK AT+ G A+G L+ Sbjct: 134 SGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E + Sbjct: 254 VNKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQQAEDA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGDLDKFIEASLK 362 >gi|241204131|ref|YP_002975227.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858021|gb|ACS55688.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 376 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 245/353 (69%), Positives = 298/353 (84%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + L DWD A++RL +LN K EDP+LW + EA+ LMRERQ LD+ I+ +K+ Sbjct: 11 ETKQAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ +L DN+ L+EL EE D S+++E D L+ +K E +Q E++LSGEAD ND YLEV Sbjct: 71 LEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWL Sbjct: 131 HSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+ + Sbjct: 251 HVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SKTEIGWG QIRSYVLQPYQMVKDLRT + ++P DVLDGDL++FM+A LA + Sbjct: 311 SKTEIGWGHQIRSYVLQPYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALAHR 363 >gi|167628822|ref|YP_001679321.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1] gi|167591562|gb|ABZ83310.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1] Length = 333 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 219/325 (67%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 ++P W + A+ M+E L + + ++++ + D +L EL EE+D IL E Sbjct: 1 MIQEPGFWDDTERAQKTMQELTGLKDKVKAYRDLRSQWEDLCVLRELGAEENDAEILAEI 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +Q I E++ E LL+G D N+A L +HAGAGGTE+ DW MLLRMY RW EKR Sbjct: 61 EAGIQTITAELDRWHLELLLNGPYDRNNALLTLHAGAGGTEAMDWNEMLLRMYIRWGEKR 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K E L+ G+EAGIKSATL + G NAYG+LKGE GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GYKVELLDSLPGDEAGIKSATLSVVGENAYGYLKGEMGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P V D EI+I D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VV CQ ERS Sbjct: 181 LEVLPEVSDGAEIQIRPEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVACQSERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +N+A A ML+AKL+E + Q++E N + + +I +G QIRSYV PY +VKD RT Sbjct: 241 QIQNRATAMRMLQAKLFERQRQEQEAEVNRLKGDQQDIAFGSQIRSYVFHPYNLVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 N E + V+DG+LD+F+ A L Sbjct: 301 NTEVGNVHAVMDGELDEFISAYLVW 325 >gi|225572941|ref|ZP_03781696.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM 10507] gi|225039699|gb|EEG49945.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM 10507] Length = 348 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 164/336 (48%), Positives = 232/336 (69%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N +R+ L + E P W + E++ M+E +++ + + + ++ ++ D L+E+ Sbjct: 3 NKEKRIEELEREMEAPDFWDDAEESQKKMKELKYMKDDLQTYENLRTQMEDMETLIEMGY 62 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE+D ++ E + L + + + ++LLSGE DSNDA + +HAGAGGTES DWA+ML Sbjct: 63 EENDPDLIPEIQEMLDEFQKSFDDIRVKTLLSGEYDSNDAIVTLHAGAGGTESCDWASML 122 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMYTRWA+K+ F E L+ DG+EAGIKS T ++G NAYG+LK E+GVHRLVRISP++ Sbjct: 123 YRMYTRWADKKGFSLEVLDYLDGDEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFN 182 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + +R TSF S V P +++ +++EI + D R+DTYR+SGAGGQH+N T SA+RITH+PT Sbjct: 183 AAGKRQTSFVSCDVMPDIEEDVDVEIRDDDIRVDTYRSSGAGGQHINKTSSAIRITHLPT 242 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ ERSQH NK +A ML+AKLY L+ Q+ EE + TEIGWG QIRSYV+ Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQENEEKLSGIRGEVTEIGWGNQIRSYVM 302 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QPY MVKD RT+ E + V+DG++D F+ A L Sbjct: 303 QPYTMVKDHRTSEETGNVDSVMDGNIDLFINAYLKW 338 >gi|325292702|ref|YP_004278566.1| peptide chain release factor 2 [Agrobacterium sp. H13-3] gi|325060555|gb|ADY64246.1| peptide chain release factor 2 [Agrobacterium sp. H13-3] Length = 342 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 229/329 (69%), Positives = 280/329 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP LW + EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL E D I+ Sbjct: 1 MNNKAEDPTLWNDATEAQKLMRERQQLDDSINGVKALEQQLKDNVELIELGEMEGDDEIV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 ++ D L+ ++ E +Q E++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KDAEDALKALRSEANRRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 ++ FK E LE+HDGEEAGIKSAT+L+KG NA+GWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 DREGFKVEVLEVHDGEEAGIKSATILVKGHNAFGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSS+WVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQ Sbjct: 181 FSSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA+LYE+ELQKRE+ AN +SKT+IGWG QIRSYVLQPYQ++KD Sbjct: 241 ERSQHKNRAKAWDMLRARLYEVELQKREDAANAQAASKTDIGWGHQIRSYVLQPYQLIKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT +E T+P +VLDGDL+ FM+A LA + Sbjct: 301 LRTGVESTAPGNVLDGDLNQFMEAALAHR 329 >gi|241895046|ref|ZP_04782342.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC 33313] gi|241871764|gb|EER75515.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC 33313] Length = 396 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 223/352 (63%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S ++ G D D ++ K +P WQ+ + A+ ++ E L ++ Sbjct: 38 MSAEIEKFGDSLDLDALNDEIAANEAKMVEPDFWQDNVAAQKIIDENNVLKGRRDDYLKL 97 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + ++L E D + E +D+L ++ ++ + LL+ D N+A LE+H Sbjct: 98 ANGVENVEAAIDLLSELYDEDMATEMADDLDKLSEDLSAYRLAQLLNEPYDKNNAILEIH 157 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G+GGTES DW L RMYTRWAE+ FK + ++ H G+ AG+ S TL+I G NAYG+L+ Sbjct: 158 PGSGGTESADWGANLQRMYTRWAEQHGFKVDIMDYHPGDVAGVDSVTLMITGHNAYGYLR 217 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHR VRISP+DS RRHTSF SI V P +DDS+E++I+ +D ++D YRASGAGGQH Sbjct: 218 SERGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDSVEVDINPADVKMDVYRASGAGGQH 277 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+THIPTG+VV QQ+RSQ +NK A+ MLRAKLY+LE+ K+E+ Sbjct: 278 INKTSSAVRLTHIPTGIVVASQQQRSQFQNKDTAYAMLRAKLYQLEMDKKEKERAAIAGD 337 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E GWG QIRSYV QPY+MVKD R E +P V+DGDLD F+ A L + Sbjct: 338 HLENGWGSQIRSYVFQPYRMVKDHRDGFESGNPQAVMDGDLDPFINAYLRWR 389 >gi|212640382|ref|YP_002316902.1| protein chain release factor B [Anoxybacillus flavithermus WK1] gi|212561862|gb|ACJ34917.1| Protein chain release factor B [Anoxybacillus flavithermus WK1] Length = 329 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 222/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E L + + + +++R + + EL EE D + +E Sbjct: 1 MAAPDFWDDQKAAQSVISEANALKDLVGEFRSLEERFENLEVTYELVKEEPDEELQKELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 61 AEAKKLSKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 YKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P DD+IEI++ + ++DTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ Sbjct: 181 EVVPEFDDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A NML+AKLY+ +L++++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREKAMNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 301 TEVGNVQAVMDGEIDVFIDAYLRSK 325 >gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis] gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis] Length = 341 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 162/335 (48%), Positives = 229/335 (68%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +R++ L DP W++ +A+ M+E L + + ++ + D +L EL E Sbjct: 4 KEERIAELELMITDPTFWEDQEQAQKTMQELTGLKDKVKSFFDLYQKWEDLGVLRELGAE 63 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D ILQE + +Q I+ E++ + LL+G D N+A + +HAGAGGTE+ DW ML+ Sbjct: 64 EEDPDILQEIEEGIQTIQSELDRWHLQLLLNGPYDRNNALVTLHAGAGGTEAMDWNEMLM 123 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW EK+ +K + L+ G+EAG+KSATL G NAYG+LKGE GVHRLVRISP+D+ Sbjct: 124 RMYIRWGEKKGYKVDILDSLAGDEAGMKSATLSFSGENAYGYLKGEMGVHRLVRISPFDA 183 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF+S+ V P V D I+I+I+ D ++DT+RASGAGGQHVN T+SAVRITHIPTG Sbjct: 184 SGRRHTSFASVEVLPEVSDDIDIQINSEDLKVDTFRASGAGGQHVNKTESAVRITHIPTG 243 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ +N+A A ML+AKL+E + Q++ + N + + +I +G QIRSYV Sbjct: 244 IVVACQSERSQIQNRATAMRMLQAKLFERQRQEQADEVNRLKGDQQDIAFGSQIRSYVFH 303 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 PY +VKD RTN E + +V+DG++DDF+ A + Sbjct: 304 PYNLVKDHRTNCEVGAVYNVMDGEIDDFVSAYMIW 338 >gi|319787302|ref|YP_004146777.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1] gi|317465814|gb|ADV27546.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1] Length = 375 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 177/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G D+D +RL +N + E P++W + A+ L RER L+ + I + Sbjct: 14 LTGRVVSLRGYLDYDAKKERLEEVNRELELPNVWDDPERAQALGRERALLEKTVGGIASV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L + LLELA E D + ++ R + +E +F+ + SG+ D +A++++ Sbjct: 74 LEGLEGSTELLELAESEQDEETAEAVVADVDRFEKHIEALEFQRMFSGQMDGANAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA MLLRMY RW E R +KTE LE+ G+ AGIKSAT ++G AYGWLK Sbjct: 134 AGAGGTEAQDWAEMLLRMYLRWCESRGWKTELLEVSGGDVAGIKSATFRVEGDFAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD I+IEI+ +D + D YR+SGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDKIDIEINPADLKTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+P+G+VV CQ ERSQH N+ +A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYELEIQKRNAEKDAVEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363 >gi|237745578|ref|ZP_04576058.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS] gi|229376929|gb|EEO27020.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS] Length = 349 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 173/343 (50%), Positives = 239/343 (69%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+ +L +N + EDP +W + +A+ L RE++ L+N + + I+ L D Sbjct: 5 YGGIFDFAAKSDKLEQVNAELEDPAVWNDPKKAQELGREKKSLENVVLSLSHIKSALTDA 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A EE D L+ ++ ++ +E +F + S D + ++++ AGAGGTE Sbjct: 65 GELFEMAKEEQDDETLKAVEADVSELQDRIEKLEFRRMFSNPMDPCNCFVDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+M+LR Y R+ E++ F LE DGE AGIK+AT+ ++G AYG+L+ E GVHR Sbjct: 125 AQDWASMILRQYLRYCERKGFNATILEQSDGEIAGIKTATIKVEGDYAYGYLRTETGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS + RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 185 LVRKSPFDSANGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+THIPTG+VVQCQ +RSQH+N+A AW ML+++LYELEL+KR E SKT++GWG Sbjct: 245 VRLTHIPTGIVVQCQNDRSQHRNRADAWEMLKSRLYELELRKRMAEQQKLEDSKTDVGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT+ E + VLDGDLDDF+ +L Sbjct: 305 HQIRSYVL-DSSRIKDLRTSHETGNTKAVLDGDLDDFIIESLK 346 >gi|292492472|ref|YP_003527911.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4] gi|291581067|gb|ADE15524.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4] Length = 365 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 180/351 (51%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L +L L G D+ +RL + + P +W A+ L +ER L + + Sbjct: 13 NLKGRLEALRGYLDFAAKQERLVEVERELAIPSVWNEPERAQRLGQERAQLQAVVGPLAA 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + L ELA+EE D +E S L+ ++ +E +F+ + +GE D N+AYL++ Sbjct: 73 LGEEIGQIKELFELAVEEGDEDTAREVSAELETMEQRLEKLEFQRMFAGEMDPNNAYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWANMLLRMY RW EK FKTE E+ GE AGIKSAT+ +G A+GWL Sbjct: 133 QAGSGGTEAQDWANMLLRMYLRWGEKHGFKTELTEVSAGEVAGIKSATIRFEGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS +RRHTSF+S++VYP VD+ I+IEI+ +D RIDTYRA+GAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDERIDIEINPADLRIDTYRAAGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+P+ +VVQCQ ERSQH+NKA LRAKLYELE++KR+ E Sbjct: 253 HVNRTDSAVRITHLPSNIVVQCQSERSQHQNKAHGMAQLRAKLYELEMRKRQAEKQAAEE 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K +IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 AKADIGWGSQIRSYVL-DQSRIKDLRTGVEMGNTQAVLDGDLDLFIEASLK 362 >gi|289450201|ref|YP_003475113.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184748|gb|ADC91173.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 369 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 227/353 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ L LG + + R+S L +T++P W + +A+ + + L + + + Sbjct: 14 MTEPLKDLGKALYIEPTLDRISELEARTQEPDFWNDQTKAQEVQTKLAGLQRKVDTYRHL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q D L++L EE+D +++ E K + ++LL GE D N+ L +H Sbjct: 74 QKEFDDIDTLIDLGQEENDGAVVAEVQTQFNAFKELFNKLRLQTLLVGEYDRNNVILNIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW ML RMYTRWAE ++ + L+I DG+EAG+KS + I G NAYG+++ Sbjct: 134 AGAGGTEAQDWTEMLYRMYTRWAEDHDYQLKVLDILDGDEAGLKSVSFEIIGENAYGYMR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D++ RRHTSF+S+ V P +D+SI+I I+ D RID YR+SGAGGQH Sbjct: 194 SEMGVHRLVRISPFDASGRRHTSFASVEVLPELDNSIQININPDDLRIDRYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITHIPTGVVV CQ ERSQ +N+ A NML++KL+ L + + + + + Sbjct: 254 VNKTESAIRITHIPTGVVVSCQTERSQIQNRETAMNMLKSKLFALAKAAQMDKVDDLKGN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + +I WG QIRSYV PY MVKD RTN E T V+DGDLD F+ A L+ K Sbjct: 314 QMDIAWGSQIRSYVFCPYTMVKDHRTNYEVTGVDKVMDGDLDGFINAYLSQGK 366 >gi|126173117|ref|YP_001049266.1| peptide chain release factor 2 [Shewanella baltica OS155] gi|153002001|ref|YP_001367682.1| peptide chain release factor 2 [Shewanella baltica OS185] gi|304410531|ref|ZP_07392149.1| peptide chain release factor 2 [Shewanella baltica OS183] gi|307304624|ref|ZP_07584374.1| peptide chain release factor 2 [Shewanella baltica BA175] gi|125996322|gb|ABN60397.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella baltica OS155] gi|151366619|gb|ABS09619.1| peptide chain release factor 2 [Shewanella baltica OS185] gi|304351015|gb|EFM15415.1| peptide chain release factor 2 [Shewanella baltica OS183] gi|306912026|gb|EFN42450.1| peptide chain release factor 2 [Shewanella baltica BA175] Length = 352 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 175/343 (51%), Positives = 233/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E +W + A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E S VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVENRSTQAVLDGDLDKFIEASLK 349 >gi|187478021|ref|YP_786045.1| peptide chain release factor 2 [Bordetella avium 197N] gi|123515203|sp|Q2L224|RF2_BORA1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|115422607|emb|CAJ49132.1| peptide chain release factor 2 [Bordetella avium 197N] Length = 367 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 171/349 (48%), Positives = 247/349 (70%), Gaps = 1/349 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + L D+D +RL +N + EDP +W + A+ L RE++ L++ + + E+ Sbjct: 17 AEREQALRRYLDYDAKTERLHVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVQTLTELG 76 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D L L ELA ++D + L+ ++ + +E +F + S AD + +L++ A Sbjct: 77 QGVADALELFELAAADEDDATLESIENDANTFQERLEGLEFRRMFSNPADPLNCFLDIQA 136 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA+MLLR Y ++AE++ FK E LE +GE AGIKSAT+ ++G A+G+L+ Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESEGEIAGIKSATIKLEGEYAFGYLRT 196 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D R+DTYRASGAGGQH+ Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHI 256 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++KR E SK Sbjct: 257 NKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRKRMAEQQKLEDSK 316 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 T++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 317 TDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 364 >gi|291087933|ref|ZP_06347924.2| peptide chain release factor 2 [Clostridium sp. M62/1] gi|291073455|gb|EFE10819.1| peptide chain release factor 2 [Clostridium sp. M62/1] Length = 343 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 157/333 (47%), Positives = 225/333 (67%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R+ L+ E+P W + + LMRE ++L + + ++++ D ++LE+ EE+ Sbjct: 2 KRIDELDKSMEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEEN 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S++ E + ++E + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RM Sbjct: 62 DPSLIPEIQGMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRM 121 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWA+K+ F T ++ DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S Sbjct: 122 YQRWADKKGFTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +R TSF S V P + + +++EI+ + RIDTYR+SGAGGQH+N T SA+RITH+PTG+V Sbjct: 182 KRQTSFVSCDVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ ERSQ +NK A ML+ KLY L+ ++ E + +I +G QIRSYV+QPY Sbjct: 242 VQCQNERSQFQNKEVAMQMLKTKLYMLKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +VKD RT E + + VLDGD+D F+ A L Sbjct: 302 TLVKDHRTGAESGNVNAVLDGDIDLFISAYLKW 334 >gi|194365600|ref|YP_002028210.1| peptide chain release factor 2 [Stenotrophomonas maltophilia R551-3] gi|238693429|sp|B4SHV0|RF2_STRM5 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|194348404|gb|ACF51527.1| conserved hypothetical protein [Stenotrophomonas maltophilia R551-3] Length = 374 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 179/351 (50%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G D+D +RL + + E P +W N A+ L RER L+ + I + Sbjct: 14 LTDRVLSLRGYLDYDAKKERLEEVTRELESPDVWNNAEYAQNLGRERSSLEKTVGGIASV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D L D LLELA E D +L + + VE +F+ + SGE D+ A++++ Sbjct: 74 LDGLADATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA +LLRMY RW E R +KTE +E+ G+ AGIKSATL ++G AYGWLK Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +VV CQ RSQH+N+ A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDAVEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363 >gi|326316598|ref|YP_004234270.1| peptide chain release factor 2 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373434|gb|ADX45703.1| Peptide chain release factor 2 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 367 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 168/350 (48%), Positives = 236/350 (67%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++ L D+D +RL +N EDP +W + +A+ L +E++ L + + ++ Sbjct: 16 LSQRTQELRRYLDFDAKFERLRTVNASLEDPSVWNDPKKAQELGKEQKSLSAVVVTLDKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN L E++ EE D + L +++ +E +F + S EAD + ++++ Sbjct: 76 TRELADNAELYEMSKEEGDEAGLLTIEAETAKLRPLIEELEFRRMFSNEADPLNCFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA MLLR Y ++AE++ FK + G+ AGIKSAT+ I+G AYG L+ Sbjct: 136 AGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP +DDSIEI I+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E E + Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDT 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 364 >gi|172058432|ref|YP_001814892.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15] gi|229576666|sp|B1YLH0|RF2_EXIS2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|171990953|gb|ACB61875.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15] Length = 366 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 167/351 (47%), Positives = 231/351 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++L+ D + + R+ L + P W N A+ ++ E L + + + Sbjct: 13 MEKKLDEYKASLDLETKISRIEELENEMTYPDFWNNQESAQKVIDESNGLKAMVDKYQHL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D + ++ EL EE D + +E L IK + + + + LL+GE D+N+A LE+H Sbjct: 73 ADGHENIVLTYELIKEEPDVELQEELESELGDIKKKFDEFELQILLNGEYDANNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMY R+ +K+ +K E ++ G+EAG+KS TL I+G NAYG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYQRFCDKQGWKVETMDYQPGDEAGVKSVTLRIQGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+G+HRLVRISP+DS+ RRHTSF S V P +D I+IEI D R+DTYRASGAGGQH Sbjct: 193 AEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFNDDIDIEIRTEDLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+PTGVVV CQQERSQ KN+ A ML+AKLY+ E++++++ + Sbjct: 253 INTTDSAVRITHVPTGVVVSCQQERSQIKNREAAMKMLKAKLYQREIEEKQKKLDEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++I WG QIRSYV PY MVKD RTN E + +DGD+ F+ A L + Sbjct: 313 KSDIAWGSQIRSYVFHPYSMVKDHRTNYEVGNTQGAMDGDIMGFIDAYLRL 363 >gi|253701853|ref|YP_003023042.1| hypothetical protein GM21_3258 [Geobacter sp. M21] gi|251776703|gb|ACT19284.1| conserved hypothetical protein [Geobacter sp. M21] Length = 371 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 177/352 (50%), Positives = 243/352 (69%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +++ L G + D+ +R+ L T P W + A+ ++R R ++ ++ + Sbjct: 11 ELAERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTIWES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL EE D + L E + +++ V +F +LSG D++ A++ + Sbjct: 71 LDKQARDIQELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTESQDWA MLLRMY R+ EK+ +KTE + +G+ AG+K T + G AYG+L Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGG 240 K E G+HRLVRISP+DS++RRHTSF+S +V+PV+ +D IEI+I+ESD RIDTYR+SGAGG Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEDDIEIKIAESDLRIDTYRSSGAGG 250 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A +LR+KLYE+EL++RE A+ Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K EIGWG QIRSYVL PY+MVKDLRT +E P VLDG LDDF+ L Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGKPDAVLDGALDDFVVPYLM 362 >gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii] gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira defluvii] Length = 377 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 177/346 (51%), Positives = 234/346 (67%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG+FD L+ + KT P W++ A + R + LD +S ++ + R D Sbjct: 15 NYGGIFDLARMTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDRELSRWRDTERRQND 74 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELALE D + QE L+ + V + E LLSGE DS++A +H GAGGT Sbjct: 75 IEALLELALESGDAGLEQELLAELEPFEKAVAQFRIELLLSGELDSSNAIFAIHPGAGGT 134 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDWA MLLRMY RWAE++ FK E L++ G+EAGIKSATL + GP AYG+LK E GVH Sbjct: 135 ESQDWAQMLLRMYVRWAEQKGFKVETLDLLAGDEAGIKSATLSVSGPYAYGYLKAEAGVH 194 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+D+N RRHTSF+S++VYP ++D +++ I + D R+DT+RA GAGGQ+VN ++ Sbjct: 195 RLVRISPFDANKRRHTSFASVFVYPELEDDVQVVIDDKDLRVDTFRAGGAGGQNVNKVET 254 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITHIPTG+VVQCQ ERSQ +N+ A +L+A+L+E+E +K+E N K +I W Sbjct: 255 AIRITHIPTGIVVQCQNERSQLQNRNGAMKILKARLFEVEQRKKEAEFNAIVGEKKDIAW 314 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYV QPYQMVKD RT E S V+DG+LD F++A L K Sbjct: 315 GSQIRSYVFQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAYLQRK 360 >gi|145589652|ref|YP_001156249.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048058|gb|ABP34685.1| bacterial peptide chain release factor 2 (bRF-2) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 349 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 167/343 (48%), Positives = 244/343 (71%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL+ +N+ EDP +W + +A+ L +E++ LD ++ + ++ + Sbjct: 5 FGGIFDFDVKSRRLTEVNSILEDPTIWDDQKKAQALGKEKKLLDGVVATLTDLNTNITGA 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + L ++A EE D + ++Q + +F + E DS + ++++ AGAGGTE Sbjct: 65 IELFDMAKEESDFETIAAIEQDVQSYSKLIGDLEFRRMFHNEMDSCNCFIDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+ML R Y ++ E++ +KTE LE DG+ AGIKSAT+ + G AYG L+ E GVHR Sbjct: 125 ACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS++ RHTSF+SI+VYP +DDSIEI+++ +D R DTYRASGAGGQH+N TDSA Sbjct: 185 LVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIDVNPADIRTDTYRASGAGGQHINKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE E+QKR + E+SKT++GWG Sbjct: 245 VRLTHLPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 305 HQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDAFIEASLK 346 >gi|296283820|ref|ZP_06861818.1| peptide chain release factor 2 [Citromicrobium bathyomarinum JL354] Length = 375 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 207/353 (58%), Positives = 263/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DW+ A++ L LN + EDP LW + +A+ +MRE++ L++AI + Sbjct: 11 RIEAALALVRQSLDWERALRELDELNARVEDPTLWDDPKQAQAIMREQKRLESAIGTVNT 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +E+ E D I+ E +L+++ + + ++LLSGEAD+NDAYLEV Sbjct: 71 ISSEMADAIEFVEMGEAEGDDDIVNEGLTSLEKLAARADADKVQALLSGEADANDAYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML+RMY RWAEKR FK E +E GE+AGIKS TL IKG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLMRMYVRWAEKRGFKVETVEYQSGEQAGIKSVTLHIKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD IEIEI+ESD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIEIEINESDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV Q +RSQHKN+A A +ML+A+L+E E+ +RE A+ + Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMSMLKARLFEREMAEREAAASGEYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYVLQPYQ+VKDLRT T+P DVLDG +D F+ A LA + Sbjct: 311 EKTEIGWGHQIRSYVLQPYQLVKDLRTGETSTAPGDVLDGAIDPFISAALAQR 363 >gi|237747768|ref|ZP_04578248.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13] gi|229379130|gb|EEO29221.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13] Length = 349 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 172/343 (50%), Positives = 239/343 (69%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+ +L +N + EDP +W + +A+ L +E++ L+N + + I+ L D Sbjct: 5 YGGIFDFAAKSDKLEQVNAELEDPDVWNDPKKAQDLGKEKKSLENVVLSLTRIKSGLDDA 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A EE D L+ D+ + ++E +F + S D + ++++ AGAGGTE Sbjct: 65 AELFEMAKEEQDDDTLKAVDDDTLELLDQIEKLEFRRMFSNPMDPCNCFIDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+M+LR Y R+ E++ F LE DGE AGIK+AT+ ++G AYG+L+ E GVHR Sbjct: 125 AQDWASMILRQYLRYCERKGFNATILEQSDGEVAGIKTATIKVEGDYAYGYLRTETGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS++ RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 185 LVRKSPFDSSNGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH PTG+VVQCQ +RSQH+N+A AW ML+++L+ELEL+KR E SKT++GWG Sbjct: 245 VRLTHAPTGIVVQCQNDRSQHRNRADAWEMLKSRLFELELRKRMSEQQKLEDSKTDVGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN E + VLDGDLDDF+ +L Sbjct: 305 HQIRSYVL-DNSRIKDLRTNHETGNTKAVLDGDLDDFILESLK 346 >gi|110801299|ref|YP_696849.1| peptide chain release factor 2 [Clostridium perfringens ATCC 13124] Length = 362 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 159/350 (45%), Positives = 230/350 (65%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +G D + ++ + L K ++ W +V +A+ + +E + + + I K Sbjct: 12 ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +R+ D +L EL EE+D +E ++ + E++ + E++LSGE D NDA L + Sbjct: 72 LNERIDDVEVLKELM-EENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNDAILTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G GG+++ DW MLLRMYTRW EK+ + E ++ G+EAG+KS TL +KG AYG+L Sbjct: 131 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +IEI+ D RIDTYRA GAGGQ Sbjct: 191 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VVQCQ ERSQ N+ A ML++KL EL+ + +E Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYV PY MVKD RTN+E ++ + V+DGD+D+F+ A L Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360 >gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense Az-Fu1] Length = 370 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 174/353 (49%), Positives = 241/353 (68%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + N L + + + + L+++ DP+ W + +A+ + +R +L + I + Sbjct: 12 EIIEKWNNLKDILKPEKLQEEIKVLDSQMADPNFWNDPKKAQEISSKRNYLGEKLEEILK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I ++ D ++L E D S+ E + ++ E+E + SLLS E DS +A L + Sbjct: 72 IDKKVKDLQDYIQLLEMEKDESLYTEVEKEINHLEKELERLEISSLLSDEMDSKNAILTL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GG E+ DW ML+RMY RWAE + F+ E ++ + AGIKSAT++IKGP AYG+L Sbjct: 132 QAGSGGVEACDWTQMLMRMYLRWAEGKGFQVEIVDYQPDDVAGIKSATIIIKGPFAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N RRHTSF+++ V P +D+ I++EI+E D RIDT+RASGAGGQ Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFAAVSVIPEIDEEIKVEINEEDLRIDTFRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LELQK++E E Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKALNMLKAKLYQLELQKQKEKQKELEG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPYQMVKDLRT E + V+DGD+D F+++ L K Sbjct: 312 EKKDITWGNQIRSYVFQPYQMVKDLRTGYEVGNVEAVMDGDIDGFIESYLKWK 364 >gi|291531340|emb|CBK96925.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium siraeum 70/3] Length = 370 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 166/347 (47%), Positives = 230/347 (66%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L G D DN ++ L ++ P W +V ++ + ++ N + +++++ Sbjct: 18 LKELAGALDLDNLKTEIAKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRESY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + +LELA EEDD S+L E + + + E+E ++ +LLSGE D N+A L HAGAG Sbjct: 78 DDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW ML RMY WAE+ K L+ DGEEAGIKSA++L++G NAYG+LK E G Sbjct: 138 GTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSENG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN T Sbjct: 198 VHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITHIPTG+V CQ ERSQH+N+ A ML++KL E++ ++ + + + + +I Sbjct: 258 SSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQLQI 317 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV PY MVKD RT E + V+DGDLD F+ A L Sbjct: 318 AWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYLKA 364 >gi|260223373|emb|CBA33874.1| Peptide chain release factor 2 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 342 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 167/340 (49%), Positives = 233/340 (68%), Gaps = 1/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD+D +RL +N EDP +W + +A+ L +E++ LD + + ++ L DN L Sbjct: 1 MFDYDAKAERLRTVNASLEDPSVWNDPKKAQELGKEKKMLDGVVVTLNDLTSNLSDNTEL 60 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E++ EE D L ++ VE +F + + AD +L++ AGAGGTE+ D Sbjct: 61 YEMSKEEGDEESLLTIETETAKLTEIVEGLEFRRMFNNPADPLPCFLDIQAGAGGTEACD 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA+MLLR Y ++AE++ F ++ DG+ AGIKSAT+ I G A+G L+ E GVHRLVR Sbjct: 121 WASMLLRQYLKYAERKGFTANVEDLTDGDTAGIKSATIKIDGEYAFGHLRTETGVHRLVR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS+ RHTSF+S++VYP +DDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+ Sbjct: 181 KSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRL 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+VVQCQ RSQH N+ AW LR++LY+ EL+KR+E E +KT++GWG QI Sbjct: 241 THIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFELRKRQEEQQKLEDTKTDVGWGHQI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 RSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 301 RSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIQASLK 339 >gi|332638053|ref|ZP_08416916.1| peptide chain release factor 2 [Weissella cibaria KACC 11862] Length = 332 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 212/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + + A+ ++ L + + + LEL E D + E Sbjct: 1 MAQPDFWNDNVAAQKVIDANNILKGRRDDYLNLTAGVENVETALELLAEMPDEDMQAEME 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+++ ++E + LL+ D N+A LE+H G+GGTES DW L RMYTRWAE+ Sbjct: 61 ADLEKLAADLESYRLAQLLNEPYDKNNAILEIHPGSGGTESADWGANLQRMYTRWAERHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ H G+ AGI SATL+I G NAYG+L+ E+GVHR VRISP+DS RRHTSF SI Sbjct: 121 FKVEIMDYHPGDVAGIDSATLMITGHNAYGYLRSERGVHRFVRISPFDSAGRRHTSFVSI 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS++++I+ +D ++D YRASGAGGQH+N T SAVR+THIPTG+VV QQ+RSQ Sbjct: 181 DVMPELDDSVDVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPTGIVVASQQQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A+ MLRAKLY+LE+ K+E+ + E GWG QIRSYV QPY+MVKD RTN Sbjct: 241 FQNKDTAYAMLRAKLYQLEMDKKEKERASIAGEQLENGWGSQIRSYVFQPYRMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E +P V+DGDLD F+ A L K Sbjct: 301 YESGNPQGVMDGDLDPFINAYLRWK 325 >gi|260887225|ref|ZP_05898488.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] gi|260863287|gb|EEX77787.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] Length = 330 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 175/325 (53%), Positives = 227/325 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N EA+ + +E + ++ KEI + D LLE+ALEE+D S+ E Sbjct: 1 MGEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMALEENDTSLEPEVQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK V + E LLSG D+N+A L +HAGAGGTE+QDW MLLRMY RWAE+ Sbjct: 61 TEFETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F ++ G+EAG+KSATL I G NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+ Sbjct: 121 FSVVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSAC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +DD++E+ I+ +D R+DTYRASGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ Sbjct: 181 DIMPEIDDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ Q MLRAKL+ELE +K+E E + +I WG QIRSYV QPY MVKD+RT Sbjct: 241 LQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYTMVKDMRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DGDLD F++A LA K Sbjct: 301 METGNVQAVMDGDLDAFIEAFLAAK 325 >gi|84515548|ref|ZP_01002910.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53] gi|84510831|gb|EAQ07286.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53] Length = 374 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 193/352 (54%), Positives = 248/352 (70%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LN L D++ A RL + + EDP LW + A+ LMR+RQ L + ++ I Sbjct: 12 IQKSLNLLAQRMDYETARYRLEEFDARVEDPTLWDDPDAAQKLMRDRQVLVDTLTMHDTI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+E+ E D I+ E + L+ ++ + K+ E+LL GEAD+ND +LEV+ Sbjct: 72 KQELADNIELIEMGEMEGDADIITEAEEALKSLREKAAQKELEALLDGEADANDTFLEVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWANML RMY RWAEK+ +K E + G+EAGIKS T I G NAYGWLK Sbjct: 132 AGAGGTESCDWANMLSRMYVRWAEKKGYKVELQSMQSGDEAGIKSVTYKIMGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRLDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N + Sbjct: 252 VNTTDSAVRITHFPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD M ATLA+ Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTGFETSDTKGVLDGDLDGLMGATLALD 362 >gi|255029564|ref|ZP_05301515.1| peptide chain release factor 2 [Listeria monocytogenes LO28] Length = 366 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 175/351 (49%), Positives = 230/351 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++Q+ GLFD D+ R++ L + DP+ W + A+ ++ E ++ Sbjct: 14 AQQIKDFRGLFDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + I LEL EE D + +E +++ + + + +LS D N+A LE+H Sbjct: 74 EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS+ RRHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQH+ Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHI 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364 >gi|269850236|gb|ACZ49981.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. Ames] Length = 365 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 227/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 12 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N A LE+ Sbjct: 72 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 364 >gi|56964831|ref|YP_176562.1| peptide chain release factor 2 [Bacillus clausii KSM-K16] gi|56911074|dbj|BAD65601.1| peptide chain release factor 2 [Bacillus clausii KSM-K16] Length = 328 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 172/323 (53%), Positives = 220/323 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + K++ + D + EL EEDD + E Sbjct: 1 MADPDFWNDQEQAQAIINETNGLKEQVHTFKDMAESYDDLEVSYELVREEDDTELASELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L +K ++ + + LLS D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEKR Sbjct: 61 SGLAALKQKMNQFELQLLLSAPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FAVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+++IE++ D +IDTYRASGAGGQHVNTTDSAVRITH+PT VV CQ ERSQ Sbjct: 181 EVMPELDDAVDIELNSEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA M++AKLY+L ++++E + EIGWG QIRSYV PY MVKD RT Sbjct: 241 IKNREQAMKMMKAKLYQLRIEEQERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + + V+DG++D F+ A L Sbjct: 301 FEIGNTNSVMDGEIDGFIDAYLR 323 >gi|85712973|ref|ZP_01044012.1| Protein chain release factor B [Idiomarina baltica OS145] gi|85693211|gb|EAQ31170.1| Protein chain release factor B [Idiomarina baltica OS145] Length = 348 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 186/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + LGG+FD+ + +RL + + E P +W + +A+ L +ER L+ I + ++ L Sbjct: 1 MRHLGGIFDYAHKKERLEEVTRELEQPEVWDDPPKAQSLGKERAALEQVIETLDNLEQGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L++LA+E +D + E L+ + ++E +F + S + DS+D Y+++ +G+G Sbjct: 61 EDIEGLVDLAVEAEDETTFDEAEQELKELLTQLEALEFRRMFSRDNDSSDCYVDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWANMLLRMY RWAE +FKTE E+ +GE AGIKSAT+ I G AYGWL+ E G Sbjct: 121 GTEAQDWANMLLRMYLRWAEAHEFKTEITELSEGEVAGIKSATVRIAGEYAYGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+S+++YP VDD IEIEI+ SD RIDTYRASGAGGQHVN T Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFIYPEVDDDIEIEINPSDLRIDTYRASGAGGQHVNRT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH PTG+VVQCQ +RSQHKNK A L+AKLYELE+QK+ E E SK +I Sbjct: 241 DSAVRITHEPTGIVVQCQSDRSQHKNKDSAMKQLKAKLYELEIQKQNEDKQALEDSKADI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT IE + VLDG LD F++A+L Sbjct: 301 GWGSQIRSYVLDD-ARIKDLRTGIENRNTQAVLDGALDPFIEASLK 345 >gi|303241850|ref|ZP_07328345.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2] gi|302590625|gb|EFL60378.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2] Length = 340 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 160/331 (48%), Positives = 221/331 (66%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + L K +P W ++ ++ ++++ + + + + D L EL LEEDD Sbjct: 5 IEELEQKASEPDFWNDIENSQKVLQKIKTMKEKLERYNRLTQEWEDAKTLCELGLEEDDE 64 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S+ E D+ ++ K + E + E+LL G D N+A L +HAGAGGTE+QDW MLLRM+T Sbjct: 65 SVFTEVEDSFKKFKKDFEELRLETLLIGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFT 124 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RW E + F L+ DGEEAGIKS T+ + G NAYG+LK E+GVHRLVRISP+D++ RR Sbjct: 125 RWGESKGFTVRILDYLDGEEAGIKSVTINVIGENAYGYLKSEKGVHRLVRISPFDASGRR 184 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S V P + D +E+ I+ D RIDTYRASGAGGQH+N T+SA+RITHIPTGVVV Sbjct: 185 HTSFASCDVMPELSDDVEVNINPDDLRIDTYRASGAGGQHINKTESAIRITHIPTGVVVA 244 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQ +NK A ML++KL E++ ++++E + + +I WG QIRSYV PY + Sbjct: 245 CQTERSQFQNKDTAMRMLKSKLLEIKEREQKEKIEDLKGIQMDIAWGSQIRSYVFCPYTL 304 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 VKD RTN E+ + +V+DGDLD F+ + L Sbjct: 305 VKDHRTNYEQINVDNVMDGDLDGFINSYLVF 335 >gi|103488652|ref|YP_618213.1| peptide chain release factor 2 [Sphingopyxis alaskensis RB2256] gi|98978729|gb|ABF54880.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingopyxis alaskensis RB2256] Length = 375 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 222/353 (62%), Positives = 265/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++ L L DWD AV+RL LN K EDP LW N A+ +MRER+ LD AI+ + Sbjct: 11 KITAALALLRRFLDWDRAVRRLDELNAKVEDPTLWDNPKAAQDVMRERRRLDEAITATRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D L+ELA E D +++ E +L + E + ++LL+GEAD NDAY+EV Sbjct: 71 IERECADTAELIELAEMEGDEAMVDEAVASLAALAARAEEDKVKALLAGEADGNDAYIEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAEKR K E +E GE+AGIKSAT+L+KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLQRMYMRWAEKRGMKVELIEYQAGEQAGIKSATMLVKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIEI+E D +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEINEGDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV Q +RSQHKN+A A ML+A+LYE ELQKRE A+ Sbjct: 251 HVNTTDSAVRITHIPTGIVVASQNDRSQHKNRATAMGMLKARLYEAELQKREAAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDG LD FM A L+ K Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGALDPFMAAALSQK 363 >gi|56459931|ref|YP_155212.1| protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR] gi|56178941|gb|AAV81663.1| Protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR] Length = 351 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 182/343 (53%), Positives = 240/343 (69%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D ++RL + + E P++W + +A+ L +ER L+ + + ++Q L D Sbjct: 7 LGGIFDYDAKLERLEEVTREMEQPNVWDDPPKAQALGKERAALEQVVQTLDKLQQGLDDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L++LA+E +D E + L + ++E +F + S + DS D YL++ +G+GGTE Sbjct: 67 EGLVDLAVEAEDEDTFNEAHEELSGLVKQLEALEFRRMFSKDNDSADCYLDIQSGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY RWAE FK E E+ +G+ AGIKSAT+ + G AYGWL+ E GVHR Sbjct: 127 AQDWANMLLRMYLRWAEAHDFKAEITELSEGDVAGIKSATVRVVGEYAYGWLRTETGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++VYP VDD I+IEI SD R+DTYRASGAGGQHVN TDSA Sbjct: 187 LVRKSPFDSGNRRHTSFASVFVYPEVDDDIDIEIDPSDLRVDTYRASGAGGQHVNRTDSA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH PTG+VVQCQ +RSQHKN+ A L+AKLYE ELQK+ E E SK +IGWG Sbjct: 247 VRLTHEPTGIVVQCQSDRSQHKNRDSAMKQLKAKLYEFELQKQNEEKQALEDSKADIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT IE + VLDG LD F++A+L Sbjct: 307 SQIRSYVLDD-ARIKDLRTGIENRNTQAVLDGALDPFIEASLK 348 >gi|227817946|ref|YP_002817955.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. CDC 684] gi|229604792|ref|YP_002869406.1| peptide chain release factor 2, programmed [Bacillus anthracis str. A0248] gi|227003828|gb|ACP13571.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. CDC 684] gi|229269200|gb|ACQ50837.1| peptide chain release factor 2, programmed [Bacillus anthracis str. A0248] Length = 380 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 227/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|171463253|ref|YP_001797366.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192791|gb|ACB43752.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 349 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 169/345 (48%), Positives = 244/345 (70%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +RL+ +N+ EDP +W + +A+ L +E++ LD ++ + ++ + Sbjct: 3 KLFGGIFDFDVKSRRLTEINSILEDPTIWDDQKKAQALGKEKKLLDGIVATLTDLNTNIT 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L L ++A EE D + +++ + +F + E DS + ++++ AGAGG Sbjct: 63 SALELFDMAKEESDFETIAAIEQDVEGYSKIIGDLEFRRMFHNEMDSCNCFIDIQAGAGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+ML R Y ++ E++ +KTE LE DG+ AGIKSAT+ + G AYG L+ E GV Sbjct: 123 TEACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS++ RHTSF+SI+VYP +DDSIEIE++ +D R DTYRASGAGGQH+N TD Sbjct: 183 HRLVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIEVNPADIRTDTYRASGAGGQHINKTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VVQCQ +RSQH+N+A+A ML+++LYE E+QKR + E+SKT++G Sbjct: 243 SAVRLTHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVG 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 303 WGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDAFIEASLK 346 >gi|56478734|ref|YP_160323.1| peptide chain release factor 2 [Aromatoleum aromaticum EbN1] gi|81598559|sp|Q5NZU2|RF2_AZOSE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|56314777|emb|CAI09422.1| peptide chain release factor 2 (RF-2),gene containing programmed frameshift site [Aromatoleum aromaticum EbN1] Length = 367 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 179/350 (51%), Positives = 240/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L D+D +L + EDP +W N +A+ L +E++ L++ + +++I Sbjct: 16 LRARGRELRRYLDYDEKSSKLEEVTRALEDPAVWNNAEKAQELGKEKRQLEDVVHNLRDI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L +LA EDD L ++ ++ +V +F + S D N ++E+ Sbjct: 76 ESLSSDLKDLFDLAEAEDDEDTLAAVEADIGELQAKVHALEFRRMFSNPMDPNPCFIEIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA ML RMY R+ E++ F E +E +GE AGIK AT+ + G AYG+L+ Sbjct: 136 AGAGGTEAQDWAGMLERMYLRYCERKGFNVELMEESEGEVAGIKGATIKVSGDYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DSN+RRHTSFSS++VYP VDDSI+I+I+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSNARRHTSFSSVFVYPEVDDSIQIDINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTGVVVQCQ +RSQHKNKA+A +ML+A+LYELEL+KR+ E S Sbjct: 256 INKTDSAVRITHEPTGVVVQCQNDRSQHKNKAEAMSMLKARLYELELRKRQSEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 316 KSDIGWGHQIRSYVL-DQSRIKDLRTNFEVGNTQAVLDGDLDDFIAASLK 364 >gi|78047471|ref|YP_363646.1| peptide chain release factor 2 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123585257|sp|Q3BUB7|RF2_XANC5 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|78035901|emb|CAJ23592.1| peptide chain release factor 2 [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 374 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 182/351 (51%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G+FD+D +RL ++ + E P +W + A+ L RER L+ + I ++ Sbjct: 14 LNDRVLSLRGIFDYDAKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA E D +L + VE +F+ + SG+ DS +A++++ Sbjct: 74 LSGLADAGDLLELAESEQDEDTALAVIADLDNYQAHVEKLEFQRMFSGQMDSANAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+ GE AGIKSAT+ I+G AYGWLK Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVRIEGEYAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT VV CQ RSQH+N+ A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNAEKDALEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363 >gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus ATCC 23263] Length = 369 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 184/352 (52%), Positives = 238/352 (67%), Gaps = 3/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +L LG D RLS L T++EDP W + A+ +++E+ L S E+ Sbjct: 14 MDAELTALGKSMDLPAIDARLSALMTQSEDPAFWNDQKSAQKVLKEQTILKRKRSRYDEV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L D ++ ELA E + E L + + E + E LLSGE DSN+A + +H Sbjct: 74 KEELDDVSVMYELAEE---GEGMDELEQMLGAFQEKFEDFKLEMLLSGEYDSNNAIISLH 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+MLLRMYTRWAE R +K + L+ G+ AGIKSATLLI+G NAYG+LK Sbjct: 131 PGAGGTESHDWASMLLRMYTRWAEARGYKIKQLDYQPGDIAGIKSATLLIEGINAYGYLK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+ D R+DTYR+SGAGGQH Sbjct: 191 TERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINPDDIRVDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SA+RITH+PTGVVVQCQ ERSQH+N+ A NML++KL E+ Q+++E Sbjct: 251 VNKTSSAIRITHLPTGVVVQCQNERSQHQNREVAMNMLKSKLVEIMAQEQKEKLEDVVGD 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++I WG QIRSYV PY MVKD RT +E + V+DGDLD FM A L + Sbjct: 311 YSQIAWGSQIRSYVFHPYTMVKDHRTGVEVGNIQTVMDGDLDRFMNAELRKE 362 >gi|226941341|ref|YP_002796415.1| PrfB [Laribacter hongkongensis HLHK9] gi|226716268|gb|ACO75406.1| PrfB [Laribacter hongkongensis HLHK9] Length = 368 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 242/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + D+D RL ++ EDP +W++ A+ L RE++ L++ + I I Sbjct: 17 LGSRTADIRQYLDYDGKKDRLEEVSRLVEDPTIWEDPKRAQELGREKKALEDVVLVIDSI 76 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D+ L ++ E+D + D+L ++ +E +F + S D N ++++ Sbjct: 77 LSTLADSRELFDMGRAEEDDDTVLAVRDDLAGVETRLEMLEFRRMFSNPMDPNSCFVDIQ 136 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+QDWA+ML RMY R+ E++ FK E +E +GE AGIKSATL ++G AYG+L+ Sbjct: 137 SGAGGTEAQDWASMLERMYLRYCERKNFKVEVIEESEGEVAGIKSATLKVEGEYAYGFLR 196 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN+RR TSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH Sbjct: 197 TETGVHRLVRNSPFDSNNRRQTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQH 256 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PT +VVQCQ +RSQHKN+A+A +ML+A+L+ELEL+KR E E + Sbjct: 257 INKTDSAVRITHLPTNIVVQCQNDRSQHKNRAEAMSMLKARLFELELRKRNEEKQALEDT 316 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYV VKDLRT +E + V+DGDLD F++A+L Sbjct: 317 KTDVGWGHQIRSYVF-DQSRVKDLRTLVEVGNVKGVMDGDLDGFIEASLK 365 >gi|49485626|ref|YP_042847.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650094|ref|YP_185692.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus COL] gi|150393263|ref|YP_001315938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus JH1] gi|56749392|sp|Q6GB76|RF2_STAAS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|56749443|sp|Q7A6R4|RF2_STAAN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|56749454|sp|Q99VM1|RF2_STAAM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|71153100|sp|Q5HHR5|RF2_STAAC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|115311853|sp|Q2YSH5|RF2_STAAB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|189040005|sp|A6TZN3|RF2_STAA2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|49244069|emb|CAG42495.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MSSA476] gi|57284280|gb|AAW36374.1| peptide chain release factor 2, programmed frameshift [Staphylococcus aureus subsp. aureus COL] gi|149945715|gb|ABR51651.1| hypothetical protein SaurJH1_0795 [Staphylococcus aureus subsp. aureus JH1] gi|269940331|emb|CBI48708.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus TW20] Length = 369 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 163/350 (46%), Positives = 224/350 (64%), Gaps = 1/350 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ L + G D +N + +P+ W N +A+ ++ + L ++ K +Q Sbjct: 14 NQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQ 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EE D + ++ + K +V+ + + LL G D+N+A LE+H Sbjct: 74 AEVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDWANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+LK Sbjct: 134 GAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T+SA+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ Sbjct: 254 INKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGE 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + EIGWG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 314 QKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363 >gi|67461212|sp|Q927Y4|RF2_LISIN RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 366 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 228/351 (64%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++Q+ G D D+ R++ L + DP+ W + A+ ++ E ++ Sbjct: 14 AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + I LEL EE D + E +++ + + + +LS D N+A LE+H Sbjct: 74 EEQESMEISLELLKEEADEDLQAELEKDIKAYVATISEFELKLMLSDPYDKNNAILELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+ Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDEIEIEVRTEDLKIDTYRATGAGGQHI 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364 >gi|319427481|gb|ADV55555.1| peptide chain release factor 2, PrfB [Shewanella putrefaciens 200] Length = 365 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 233/351 (66%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + L G D+D +RL + + E +W A+ L +ER L+ + I + Sbjct: 13 ELAERTQLLRGYLDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EE+D ET+ L ++ + +F + SG D+++ YL++ Sbjct: 73 MDSGLEDVEGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E Sbjct: 253 HVNRTESAVRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDKFIEASLK 362 >gi|110802702|ref|YP_699445.1| peptide chain release factor 2 [Clostridium perfringens SM101] gi|123145940|sp|Q0SR12|RF2_CLOPS RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 364 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 157/350 (44%), Positives = 229/350 (65%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +G D + ++ + L K ++ W +V +A+ + +E + + + I K Sbjct: 14 ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +R+ D +L EL EE+D +E ++ + E++ + E++LSGE D N+A L + Sbjct: 74 LNERIDDVEVLKELM-EENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNNAILTL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G GG+++ DW MLLRMYTRW EK+ + E ++ G+EAG+KS TL +KG AYG+L Sbjct: 133 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +IEI+ D RIDTYRA GAGGQ Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VVQCQ ERSQ N+ A ML++KL EL+ + +E Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYV PY MVKD RTN+E ++ + V+ GD+D+F+ A L Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362 >gi|115311855|sp|Q49VV3|RF2_STAS1 RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 373 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 160/352 (45%), Positives = 228/352 (64%), Gaps = 1/352 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + +L L G D + + DP W N +A+ ++ + L + ++ + ++ Sbjct: 14 NEKLEQLRGSLDLEAKETNIQEYEEMMTDPTFWDNQEKAQDVIDKNNALKSVVNAYRTLE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L LEEDD ++ Q+ ++Q K E++ + + LL G D+N+A +E+H Sbjct: 74 SELEDMDTTRALLLEEDDETMKQDLEQSVQDFKNELDQFELQLLLDGPYDANNAIMELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDW NMLLRMY R+ E++ F E + G+EAG+KS TL++KG NAYG+LK Sbjct: 134 GAGGTESQDWTNMLLRMYQRYCEQKGFNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S V P +++ IEI+I+ D +DT+RASGAGGQH Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFASCDVIPQFNNTEIEIDINPDDITVDTFRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T+SA+RITH PTG+VV Q ERSQ KN+ A L++KLY+L+++++E+ Sbjct: 254 INKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGE 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY MVKD RTN E V+DGD+ F++A L + Sbjct: 314 QKEIGWGSQIRSYVFHPYAMVKDHRTNEETGKVDAVMDGDIGPFIEAFLRSQ 365 >gi|325129251|gb|EGC52090.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304] gi|325133309|gb|EGC55975.1| peptide chain release factor 2 [Neisseria meningitidis M13399] gi|325205086|gb|ADZ00540.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355] Length = 341 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 170/339 (50%), Positives = 237/339 (69%), Gaps = 1/339 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 1 MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 61 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 121 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG QIR Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 301 SYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 338 >gi|190149600|ref|YP_001968125.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307245141|ref|ZP_07527233.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249543|ref|ZP_07531530.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255961|ref|ZP_07537758.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258552|ref|ZP_07540288.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260795|ref|ZP_07542482.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262921|ref|ZP_07544544.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914731|gb|ACE60983.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306853921|gb|EFM86134.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306858398|gb|EFM90467.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861075|gb|EFM93072.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867346|gb|EFM99198.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869521|gb|EFN01311.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871739|gb|EFN03460.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 347 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 174/344 (50%), Positives = 240/344 (69%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ I+ + + D Sbjct: 3 FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+E +D E ++ ++ +F+ + SG+ D+ D Y+++ AG+GGTE Sbjct: 63 EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+HR Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+G+VVQCQ RSQH+NK Q L+AKLYE+E+ K+ E SK++IGWG Sbjct: 243 VRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 303 SQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 345 >gi|163748442|ref|ZP_02155696.1| peptide chain release factor 2 [Shewanella benthica KT99] gi|161332020|gb|EDQ02697.1| peptide chain release factor 2 [Shewanella benthica KT99] Length = 352 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 167/344 (48%), Positives = 230/344 (66%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG+FD+D +RL ++ + E +W + A+ L +ER L+ + I ++ L D Sbjct: 7 AFGGIFDYDAKKERLEEVSRELESSDIWNDPDNAQALGKERAALELIVKTIDDMDTGLED 66 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L+ELA+EE D + S L + + +F + SG D ++YL++ +G+GGT Sbjct: 67 VEGLVELAIEEADEETFNDASAELDGLDKRLADLEFRRMFSGPHDIANSYLDIQSGSGGT 126 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWANM+LRMY RW + FK E +E+ G+ AGIK AT+ G A+G L+ E GVH Sbjct: 127 EAQDWANMVLRMYLRWGDAHDFKPELIEVTAGDVAGIKGATIKFTGEYAFGSLRTETGVH 186 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS+ +RHTSF S++VYP +DD+IEI+I+ SD RIDTYRASGAGGQH+N T+S Sbjct: 187 RLVRKSPFDSSGKRHTSFCSVFVYPEIDDTIEIDINPSDLRIDTYRASGAGGQHINKTES 246 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E E +K++IGW Sbjct: 247 AIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNEEKQAAEDAKSDIGW 306 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 307 GSQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGGLDMFIEASLK 349 >gi|167750196|ref|ZP_02422323.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702] gi|167656758|gb|EDS00888.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702] gi|291556130|emb|CBL33247.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium siraeum V10Sc8a] Length = 370 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 166/347 (47%), Positives = 229/347 (65%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L G D DN + L ++ P W +V ++ + ++ N + +++++ Sbjct: 18 LKELAGALDLDNLKAEIVKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRESY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + +LELA EEDD S+L E + + + E+E ++ +LLSGE D N+A L HAGAG Sbjct: 78 DDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW ML RMY WAE+ K L+ DGEEAGIKSA++L++G NAYG+LK E G Sbjct: 138 GTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSENG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN T Sbjct: 198 VHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITHIPTG+V CQ ERSQH+N+ A ML++KL E++ ++ + + + + +I Sbjct: 258 SSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQLQI 317 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV PY MVKD RT E + V+DGDLD F+ A L Sbjct: 318 AWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYLKA 364 >gi|225387178|ref|ZP_03756942.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme DSM 15981] gi|225046726|gb|EEG56972.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme DSM 15981] Length = 338 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 153/324 (47%), Positives = 217/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + ++ ++RE ++L + + +E++ D +++++ EE+D S++ + Sbjct: 1 MEEPGFWDDPEKSTRMVREVKNLKDDVETYRELEQEYDDIQVMIQMGYEENDASVIPDIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L +E + + LLSGE D N+A L ++AGAGGTES DW +ML RMY RWAE++ Sbjct: 61 EMLDHFIKTLEDMRLKLLLSGEYDKNNAILRLNAGAGGTESCDWCSMLYRMYCRWAERKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ DG+EAGIKS T+ + G NAYG+L+ E GVHRLVRISP+++ +R TSF S Sbjct: 121 FKYEVLDFLDGDEAGIKSVTIQVNGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ +++E++ D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ Sbjct: 181 DVMPDIEADLDVEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHMPTGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKLY L+ Q+ A +IGWG QIRSYVLQPY MVKD RT Sbjct: 241 FQNKDKAMQMLKAKLYMLKQQESAAKAAGIRGEVKDIGWGNQIRSYVLQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG +D F+ A L Sbjct: 301 EESGNVDAVLDGSIDSFISAYLRW 324 >gi|138896684|ref|YP_001127137.1| peptide chain release factor 2, RF-2 [Geobacillus thermodenitrificans NG80-2] gi|134268197|gb|ABO68392.1| Bacterial peptide chain release factor 2, RF-2 [Geobacillus thermodenitrificans NG80-2] Length = 327 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 222/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E L + + + +R + + EL EE D + E Sbjct: 1 MAAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 61 EEAKKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A NML+AKLY+ ++++++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREKAMNMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F+ A L K Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325 >gi|159043721|ref|YP_001532515.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12] gi|157911481|gb|ABV92914.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12] Length = 375 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 192/352 (54%), Positives = 246/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L+ L D++ A RL + EDP+LW + A+ LMR+RQ L +A+ + I Sbjct: 12 IRKSLDLLAQRLDYETAPHRLEEFDAMIEDPNLWNDQARAQKLMRDRQMLVDAMKTYEGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL E D ++ + + L+ + K+ E+LL GEAD ND +LE++ Sbjct: 72 KQELEDNIELIELGEMEADAEVVTDAEEALKSLAETAAKKEIEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA+ML RMY RWAE + + E GEEAGIKSA I GPNAYGWLK Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAKGYTVELQSQSPGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG +V E+SQH+N+ A L+++LY++EL +R N + Sbjct: 252 VNTTDSAVRITHVPTG-IVTTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVLQPYQMVKDLRT E + + VLDGDLD M ATLA + Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTAGVLDGDLDGLMSATLAQQ 362 >gi|241662572|ref|YP_002980932.1| hypothetical protein Rpic12D_0960 [Ralstonia pickettii 12D] gi|240864599|gb|ACS62260.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 367 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 248/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + L D+D +RL ++ + E+P +W + A+ L RE++ L+ + + ++ Sbjct: 16 LKSRADDLRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L ELA EE D ++ + ++ VE +F + SG D+ + ++++ Sbjct: 76 DEDLTGAAELFELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE +G+ AGIKSA++ ++G A+G+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RHTSFSSI+VYP VDDSIEIEI+ +D R+DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEINPADLRVDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E++ Sbjct: 256 INKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAA 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 364 >gi|240850608|ref|YP_002972008.1| peptide chain release factor 2 [Bartonella grahamii as4aup] gi|240267731|gb|ACS51319.1| peptide chain release factor 2 [Bartonella grahamii as4aup] Length = 375 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 226/353 (64%), Positives = 283/353 (80%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L G DWD +++RL +LN K EDP LW + +A+ +MRERQ LD++I+ + Sbjct: 11 EIQKAIQLLRGHLDWDQSLKRLEYLNQKAEDPSLWDDAQQAQDMMRERQRLDDSINGLLS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 L + + L+ + EE D I+ + ++++ +K E++ +Q + LLSGEAD ND YLEV Sbjct: 71 FTKTLEECIELIAMGEEESDVEIIADAENSIRNLKNEIDKRQIDVLLSGEADPNDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGIKSAT+L+KG NAYG L Sbjct: 131 HAGAGGTESQDWASMLLRMYMRWAEQHEMKVEILEIHDGEEAGIKSATILVKGHNAYGML 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE+D RIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSEADVRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE N ES Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAAES 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P VL+G+LD F++A LA + Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDAFIEAALARR 363 >gi|219670742|ref|YP_002461177.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2] gi|219541002|gb|ACL22741.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2] Length = 368 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 162/350 (46%), Positives = 228/350 (65%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D ++S L + + P W N A+ +M+E + + + Sbjct: 12 LEVRLADLRVSLDVPQREDKISILEIELQRPDFWDNPEGAQKVMQELSYQQEKVKTYYTL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q +L D L L ++A+EE D S+ E + + ++ ++ + E LLSG D N+A + +H Sbjct: 72 QQQLDDMLTLYQMAVEEKDESLEPELEEGILALQQRLDGLELEILLSGPYDRNNAIVTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW +ML RMY R+ E+ +K E ++ G+EAGIKSATL G NA+G+LK Sbjct: 132 AGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAGIKSATLSFAGENAFGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHRLVRISP+D++ RRHTSF+S+ V P ++D+ EI+I D ++DTYRASGAGGQ Sbjct: 192 AEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQIPPEDLKVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVRITH+PTG+VVQ Q ERSQ +N+A +L+AKL EL+ +++E+ + Sbjct: 252 HVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAKLLELKRKQQEDEISEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EI WG QIRSYV PY MVKD RTN E + V+DG++D F+ A L Sbjct: 312 EQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGEIDQFIAAYL 361 >gi|325127235|gb|EGC50173.1| peptide chain release factor 2 [Neisseria meningitidis N1568] gi|325137398|gb|EGC59986.1| peptide chain release factor 2 [Neisseria meningitidis ES14902] gi|325141306|gb|EGC63796.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945] gi|325199214|gb|ADY94670.1| peptide chain release factor 2 [Neisseria meningitidis G2136] gi|325203114|gb|ADY98568.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149] Length = 341 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 170/339 (50%), Positives = 237/339 (69%), Gaps = 1/339 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 1 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 61 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 121 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG QIR Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 301 SYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 338 >gi|238020780|ref|ZP_04601206.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147] gi|237867760|gb|EEP68766.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147] Length = 367 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 242/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++ + + D+ +RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LSQRNSDIRVYMDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + DN L+++ +EE+D ++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ENGIADNRELIDMVVEENDADGFAAIVADVAALEQQMADLEFKRMFNQPADPNNCFVDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA MLLRMYTR+AE++ FK E +E DGE AGI +ATL I+G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQ Q RSQH+N+ MLRAKL+ELE++KR E E Sbjct: 256 INKTDSAVRITHLPTGIVVQSQSSRSQHENRRIVMEMLRAKLFELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|77359475|ref|YP_339050.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis TAC125] gi|123589557|sp|Q3ILD8|RF2_PSEHT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|76874386|emb|CAI85607.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas haloplanktis TAC125] Length = 365 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 180/351 (51%), Positives = 234/351 (66%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L G D+ +RL +N + ED +W A+ L RE+ L+ + I Sbjct: 13 EIRERTELLRGYLDYALKQERLEEVNAELEDSAVWNEPERAQALGREKSALEAVVETIDT 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D LLELA+E +D E L + ++E +F + SG DSNDAYL++ Sbjct: 73 LVTGTDDVEGLLELAVEAEDQETFDEAQSELADLNEQLEALEFRRMFSGPHDSNDAYLDL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDW N+LLRMY RW E + FK E +E G+ AGIK AT+ G AYGWL Sbjct: 133 QSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATGGDVAGIKGATVRFVGEYAYGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF+S +VYP VDD+IEI+++ SD RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDMNPSDLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRITH+PT VVQCQ ERSQHKNKAQA L+AKL+ELELQ++ E Sbjct: 253 HVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SK++IGWG QIRSYVL +KDLRT +E + VLDG+LD F++A+L Sbjct: 313 SKSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGNLDKFIEASLK 362 >gi|52082063|ref|YP_080854.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580] gi|52787452|ref|YP_093281.1| hypothetical protein BLi03772 [Bacillus licheniformis ATCC 14580] gi|319647929|ref|ZP_08002147.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2] gi|52005274|gb|AAU25216.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580] gi|52349954|gb|AAU42588.1| PrfB [Bacillus licheniformis ATCC 14580] gi|317390270|gb|EFV71079.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2] Length = 327 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + ++ K + + + + +L E+ D + E Sbjct: 1 MADPDFWGDQQKAQTIINEANALKDYVNTYKSLSESHEELQMTHDLLKEDPDQDLQNELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R Sbjct: 61 NELKSLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ I+IEI D ++DTYRASGAGGQHVNTTDSAVRITH+PTGV+V CQ ERSQ Sbjct: 181 DVMPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML++KLY+ +++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDSFIDAYLRSK 325 >gi|240143320|ref|ZP_04741921.1| peptide chain release factor 2 [Roseburia intestinalis L1-82] gi|257204691|gb|EEV02976.1| peptide chain release factor 2 [Roseburia intestinalis L1-82] gi|291536819|emb|CBL09931.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia intestinalis M50/1] gi|291539122|emb|CBL12233.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia intestinalis XB6B4] Length = 338 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 161/324 (49%), Positives = 217/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P+ W + + ++ M+E + + + ++ ++ D L+E+ EE+D S++ E Sbjct: 1 MEAPNFWDDPVVSQKKMKELKSMKDDVATYASLKTEFEDIETLIEMGYEENDASLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L E + ++LLSGE DS+ A + +HAGAGGTES DWA ML RMYTRWA + Sbjct: 61 EMLDEFTKTYEGIRIKTLLSGEYDSDGAIVSLHAGAGGTESCDWAAMLYRMYTRWASDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DGEEAGIKS T I G NAYG++K E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FSVEVLDSLDGEEAGIKSITFQINGENAYGYMKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ +++EI+E D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDVEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKLY L+ Q+ E A TEIGWG QIRSYV+QPY MVKD RT Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKAADIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + V+DG +D F+ L Sbjct: 301 VETGNVDSVMDGKIDIFINGYLKW 324 >gi|300022372|ref|YP_003754983.1| hypothetical protein Hden_0845 [Hyphomicrobium denitrificans ATCC 51888] gi|299524193|gb|ADJ22662.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC 51888] Length = 377 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 191/352 (54%), Positives = 257/352 (73%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L DW+ A RL+ LN K EDP+LW + A+ +MR+RQ L+ ++ K + Sbjct: 12 IKEAIALLRRSLDWETAEDRLASLNAKAEDPNLWSDAKNAQKVMRQRQTLERSVEDFKRL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q D L L+EL E D + + E L+R+ LE + E++LSGEAD Y+EVH Sbjct: 72 QRDYDDALTLIELGEAESDEASVSEGEAALKRVDLEAHRRSVEAMLSGEADGMSTYVEVH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA+ML RMY RW E+R +K + ++ GEEAGIKSAT I G NA+GWLK Sbjct: 132 AGAGGTESQDWASMLARMYARWGERRGYKVKLIDESPGEEAGIKSATFEIDGDNAFGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+ VYPV+DD+IE++I+ +D I R+SGAGGQH Sbjct: 192 TEAGVHRLVRISPFDSNARRHTSFASVTVYPVIDDTIEVDINPADVDISFARSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVR+ H P+G+V+ Q++RSQH+NK A+ L+A+LYE+EL+KRE AN +++ Sbjct: 252 VNRTESAVRLVHKPSGIVIFAQEQRSQHQNKDIAFRRLKARLYEMELKKREAKANAEQAA 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQ+VKDLRT + T+PS+VLDGD+D F++A L+ + Sbjct: 312 KTDIGWGHQIRSYVLQPYQLVKDLRTGAQSTNPSEVLDGDIDPFIEAALSQR 363 >gi|320116558|ref|YP_004186717.1| peptide chain release factor 2 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319929649|gb|ADV80334.1| Peptide chain release factor 2 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 368 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 165/353 (46%), Positives = 234/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + ++ +G D ++ + + ++ K DP W ++ +++ L ++++ L + Sbjct: 11 NMIEEVKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL LEE D SI E + +K ++E + ++LL+G D N+A L + Sbjct: 71 LVSKWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GGTE+QDWA MLLRMYTRWA + F+ E L+ GEEAGIKS TL+IKGP AYG+L Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+ + V P +++ IE+EI D +IDTYRASGAGGQ Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIRSYV QPY +VKD RTN E + V+DG++D F+ A L K Sbjct: 311 EHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363 >gi|323143525|ref|ZP_08078205.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066] gi|322416719|gb|EFY07373.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066] Length = 347 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 171/344 (49%), Positives = 235/344 (68%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD++ +RL +N EDP +W + +A+ L +ERQ L + +S ++ D Sbjct: 2 LLGGIFDFETKKERLEEVNGLLEDPQVWNDPEKAQQLGKERQVLSSVVSRFDKLYSGFDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L+L EL EE D ++E +++ + +FE + S D++D Y+++ +G+GGT Sbjct: 62 VLMLFELGSEEGDEDSIKEAYSEADKLEEVLNALEFERMFSKPNDNSDCYMDIQSGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA M++RMY ++ EK F +E +GE AGIKSATL GP A+GWL+ E G+H Sbjct: 122 EAQDWAEMVMRMYLKFGEKHGFDCTVIECSEGEVAGIKSATLKFAGPYAFGWLRTETGIH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DSN+RRHTSF S +VYP +D+ I++EI+ +D +ID +R+SGAGGQHVN T+S Sbjct: 182 RLVRKSPFDSNNRRHTSFCSAFVYPEIDNDIKVEINPADLKIDVFRSSGAGGQHVNKTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTGVVV CQ ERSQ +N+ QA LRAKLYELEL+K++ E SK +IGW Sbjct: 242 AVRITHIPTGVVVSCQNERSQFQNRDQAMKQLRAKLYELELRKQQSEQQAIEDSKADIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL VKDLRT +E VL+GDLD F++A+L Sbjct: 302 GSQIRSYVLDD-ARVKDLRTQVECRDTQRVLNGDLDQFIEASLK 344 >gi|46908681|ref|YP_015070.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b str. F2365] gi|67461157|sp|Q71WR9|RF2_LISMF RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|46881953|gb|AAT05247.1| peptide chain release factor 2, programmed frameshift [Listeria monocytogenes serotype 4b str. F2365] Length = 366 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 229/351 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++Q+ G D D+ R++ L + DP+ W + A+ ++ E ++ Sbjct: 14 AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + I LEL EE D + +E +++ + + + +LS D N+A LE+H Sbjct: 74 EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+ Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHI 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EIGWG QIRSYV PY MVKD RTN E + V+DGDLD+F+ A L + Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 364 >gi|294788774|ref|ZP_06754015.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453] gi|294483256|gb|EFG30942.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453] Length = 367 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 167/350 (47%), Positives = 243/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ + D+ +RL + +EDP LW + A+ + +ER+ L+ + + + Sbjct: 16 LAQRNRDIRDYMDYQGKKERLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTMDNL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + DN L+++ +EE+D ++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ENGIADNRELIDMVVEENDTDGFAAIIADVADLETQMAALEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK + LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKLDILEEDDGEIAGINRATIRVEGKYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+D+N++RHTSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDANNKRHTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A MLR+KL+ELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLRSKLFELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|49483011|ref|YP_040235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA252] gi|56749421|sp|Q6GIN7|RF2_STAAR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|49241140|emb|CAG39818.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA252] Length = 369 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 162/350 (46%), Positives = 224/350 (64%), Gaps = 1/350 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ L + G D +N + +P+ W N +A+ ++ + L ++ K +Q Sbjct: 14 NQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQ 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EE D + ++ + K +V+ + + LL G D+N+A LE+H Sbjct: 74 AEVDDMDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDWANML RMY R+ EK+ FK + ++ G+EAGIKS TLLIKG NAYG+LK Sbjct: 134 GAGGTESQDWANMLFRMYQRYCEKKGFKVKTVDYLPGDEAGIKSVTLLIKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T+SA+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ Sbjct: 254 INKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGE 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + EIGWG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 314 QKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363 >gi|121595079|ref|YP_986975.1| peptide chain release factor 2 [Acidovorax sp. JS42] gi|222111422|ref|YP_002553686.1| hypothetical protein Dtpsy_2248 [Acidovorax ebreus TPSY] gi|229576664|sp|A1W9H4|RF2_ACISJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790913|sp|B9MBK7|RF2_DIAST RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|120607159|gb|ABM42899.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax sp. JS42] gi|221730866|gb|ACM33686.1| conserved hypothetical protein [Acidovorax ebreus TPSY] Length = 367 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 239/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L D+D +RL +N EDP +W + +A+ L +E++ LD + ++++ Sbjct: 16 LTERTQELRRYLDYDAKFERLRTVNASLEDPAVWNDPKKAQELGKEKKSLDAVVLTLQKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN L E++ EE D + L ++++ +E +F + S EAD + ++++ Sbjct: 76 TTELADNAELYEMSKEEGDEAGLTTIEAEAEKLRPLIEELEFRRMFSNEADPLNCFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++AE++ FK E G+ AGIKSAT+ I+G AYG L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP +DDSIEI I+ SD R DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPSDVRTDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E E + Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDT 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 364 >gi|323706500|ref|ZP_08118060.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534162|gb|EGB23953.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum LX-11] Length = 327 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 155/325 (47%), Positives = 224/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W ++ + + L ++++ L IS + ++ + D L+EL LEE D S+ QE Sbjct: 1 MSEPDFWNDLEKFQELSKKQKDLKEIISEYEALEKQWEDLHTLIELGLEEGDESLSQEVH 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + ++ + ++LLSG D N+A L +HAGAGGTE+QDW MLLRMY RWA + Sbjct: 61 EEYKALSKKINDMKIKTLLSGPYDKNNAILSIHAGAGGTEAQDWTEMLLRMYMRWASSKN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G++AG+KS T+++KGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 YDVETVDYLPGDDAGVKSVTIMVKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD I+++I D +IDTYR+SGAGGQHVN T+SA+RITHIPTG++VQCQ ERSQ Sbjct: 181 EVLPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIVQCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL ++ +++++E + E GWG QIRSYV QPY +VKD RTN Sbjct: 241 MQNRETAMKMLKAKLMDMMIKEQKEKIEDLKGEHKEAGWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + + V+DG++DDF+ A L K Sbjct: 301 FEVGNVNAVMDGEIDDFINAYLKQK 325 >gi|239623407|ref|ZP_04666438.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522373|gb|EEQ62239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 338 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 157/324 (48%), Positives = 218/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W N ++ ++RE ++L + + +E++ D +++++ EE+D S++ E Sbjct: 1 MEEPGFWDNPEKSTRMVREAKNLKDEVETFRELEQEYEDIQVMIQMGYEENDASLIPEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L +E + + LLSGE DSN+A L ++AGAGGTES DW +ML RMY RWAEK+ Sbjct: 61 EMLGHFSDTLEKMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE L+ DG+EAGIKS T+ I G NAYG+L+ E GVHRLVRISP+++ +R TSF S Sbjct: 121 FKTEVLDFLDGDEAGIKSVTVQINGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + + I+IEI+ D RIDTYR+SGAGGQH+N T SA+RITH P+G VV CQ ERSQ Sbjct: 181 DIMPDIQEDIDIEINPDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGTVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML++KL+ L+ +++ A + GWG QIRSYVLQPY MVKD RT Sbjct: 241 FQNKDKAMQMLKSKLFLLKQEEQAAKAAGIRGDVKDNGWGSQIRSYVLQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG++D F+ A L Sbjct: 301 EESGNVDAVLDGNIDSFISAYLRW 324 >gi|120597725|ref|YP_962299.1| peptide chain release factor 2 [Shewanella sp. W3-18-1] gi|146294138|ref|YP_001184562.1| peptide chain release factor 2 [Shewanella putrefaciens CN-32] gi|120557818|gb|ABM23745.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. W3-18-1] gi|145565828|gb|ABP76763.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella putrefaciens CN-32] Length = 352 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 172/343 (50%), Positives = 232/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ET+ L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349 >gi|308535208|ref|YP_002137819.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem] gi|308052553|gb|ACH38023.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem] Length = 371 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 176/352 (50%), Positives = 243/352 (69%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +++ L G + D+ +R+ L T P W + A+ ++R R ++ ++ + Sbjct: 11 ELTERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTTWES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL EE D + L E + +++ V +F +LSG D++ A++ + Sbjct: 71 LDKQARDIKELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTESQDWA MLLRMY R+ EK+ +KTE + +G+ AG+K T + G AYG+L Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240 K E G+HRLVRISP+DS++RRHTSF+S +V+PV ++ IEI+I+ESD RIDTYR+SGAGG Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEEDIEIKIAESDLRIDTYRSSGAGG 250 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A +LR+KLYE+EL++RE A+ Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG LDDF+ L Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGSLDDFVVPYLM 362 >gi|67461211|sp|Q8Y4D8|RF2_LISMO RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 366 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 228/351 (64%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++Q+ G D D+ R++ L + DP+ W + A+ ++ E ++ Sbjct: 14 AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + I LEL EE D + +E +++ + + + +LS D N+A LE+H Sbjct: 74 EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS+ RRHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQH+ Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHI 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364 >gi|217970376|ref|YP_002355610.1| peptide chain release factor 2 [Thauera sp. MZ1T] gi|217507703|gb|ACK54714.1| conserved hypothetical protein [Thauera sp. MZ1T] Length = 367 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 180/350 (51%), Positives = 240/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L D+D +L +N EDP +W N A+ L +E++ L++ + +++I Sbjct: 16 LAARGRELRRYLDYDVKASKLEEVNRALEDPAVWNNAERAQELGKEKRQLEDVVLTLQKI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L ELA EDD + +L ++ +E +F + S D N+ ++E+ Sbjct: 76 DAQSRDLKDLFELAEAEDDDDTFEAVEADLVELQGAIEKLEFRRMFSNPMDPNNCFIEIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA ML RMY R+ EK+ F E +E +GE AGIK+ T+ G AYG+L+ Sbjct: 136 AGAGGTEAQDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQHKNKA+A +ML+A+LYE EL+KR+ E S Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHKNKAEAMSMLKARLYEAELRKRQSEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 316 KSDIGWGHQIRSYVL-DQSRIKDLRTNYEVGNTQAVLDGDLDDFIGASLK 364 >gi|296127692|ref|YP_003634944.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563] gi|296019508|gb|ADG72745.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563] Length = 367 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 165/353 (46%), Positives = 232/353 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + Q L G D D+ +R+ ++ + W + I+A+ LM+ER L + I ++ Sbjct: 12 NIKEQSEILRGYLDPDSIYKRVKEIDEISAKDDFWNDNIKAQKLMKERMLLLDKIEPVEN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + L+E+A+E +D + +E ++ + + ++L SGE DS +AYL + Sbjct: 72 LIKNSNNIYELVEMAIESNDIEMEKELEGECIELQRVFDELETKNLFSGEFDSKNAYLTL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY R+ E+ F E + G+EAGIK + ++G AYG+L Sbjct: 132 NAGAGGTESCDWASMLSRMYVRFCERHGFTVEITDELPGDEAGIKQISFYVQGLYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+EI+ SD R+DTYRASGAGGQ Sbjct: 192 RSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVEINPSDLRVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SA+RITHIPT +VVQCQ ERSQH NK A ML+AKLY+LE K ++ Sbjct: 252 HVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKDKLDKEKQKIAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+I WG QIRSYV QPYQMVKDLRT E + + V+DG++D+F+ A L + Sbjct: 312 EKTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYLKQQ 364 >gi|270290715|ref|ZP_06196939.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4] gi|270280775|gb|EFA26609.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4] Length = 343 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 166/336 (49%), Positives = 221/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + +S K +P W + +A+ ++ E L K + D + + + LEL Sbjct: 1 MNESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLELLEM 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + E D L + + + LL+G+ D+N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADPDVQAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAILEIHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE+ +FK + + GE AGI S T+ + G NAYG+L+ E+GVHRLVR+SP+DS Sbjct: 121 RMYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYGYLRSEKGVHRLVRLSPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DDS+E+ I+ D R+D YR+SGAGGQH+N T SAVRITH+PTG Sbjct: 181 AGRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV Q ERSQ +N+ A NML+AKL+ELE QK+ E E ++ EIGWG QIRSYV Sbjct: 241 IVVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN+E + V+DGDLDDF+ A L K Sbjct: 301 PYSMVKDHRTNLETANVQGVMDGDLDDFINAYLQWK 336 >gi|56421641|ref|YP_148959.1| peptide chain release factor 2 in translation [Geobacillus kaustophilus HTA426] gi|56381483|dbj|BAD77391.1| peptide chain release factor 2 in translation [Geobacillus kaustophilus HTA426] Length = 327 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 224/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P+ W + A+ ++ E L + + +++R + + EL EE D + E Sbjct: 1 MAAPNFWDDQKSAQAVISEANALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 61 EEAKKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVVPELDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A NML+AKLY+ +L++++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F+ A L K Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325 >gi|227529549|ref|ZP_03959598.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC 49540] gi|227350508|gb|EEJ40799.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC 49540] Length = 356 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 165/348 (47%), Positives = 222/348 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GGLFD D + ++ K +P W + + A+ ++ L + +++D + Sbjct: 2 LPASGGLFDLDALDESIAENEQKMAEPGFWDDNVAAQKVINANNELKDKRDTFVKLRDNI 61 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + +EL E D + E + + E+E + LL GE D+ +A LE+H GAG Sbjct: 62 GNLQTSIELLELEPDDELQSEFEKSFGETQKELEQYRLNQLLDGEYDAKNAILEIHPGAG 121 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RW E+ F E GEEAGIKS TLLIKG NA+G+L+ E+G Sbjct: 122 GTEAQDWGAMLLRMYVRWGEQHGFNVETASYEAGEEAGIKSVTLLIKGHNAFGYLRSEKG 181 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+D+ RRHTSF+S+ V P +D+S+ I+I SD R+DT+R+SGAGGQH+N T Sbjct: 182 VHRLVRISPFDAAGRRHTSFASVDVMPELDESVNIDIDPSDLRVDTFRSSGAGGQHINKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITHIPTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E + EI Sbjct: 242 ESAVRITHIPTGIVTSSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLEI 301 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 GWG QIRSYV PY +VKD R+ E + V+DGDLD F+ A L K Sbjct: 302 GWGSQIRSYVFHPYTLVKDNRSGHETHNGQAVMDGDLDPFINAYLQWK 349 >gi|296111417|ref|YP_003621799.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154] gi|295832949|gb|ADG40830.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154] Length = 372 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 154/354 (43%), Positives = 223/354 (62%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + D + + ++ + +P W + ++A+ ++ E L N Sbjct: 12 EIKENITRFRSTLDLEALTEEIADFENRMTEPGFWDDNVKAQKVIEENNVLKNRRDSFLN 71 Query: 62 IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + ++ + +L+E+ E+ DD +L E +N+ +I+ +VE E LL+ D+N+A LE Sbjct: 72 LTNQAEEIDVLIEMLSEDPDDVEMLAELEENVAKIQKDVEAYNLEQLLTEPYDANNAILE 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 VH G+GGTES DW L RMYTRWA++ F+ + L+ H G+EAGI SAT+ I G NA+G+ Sbjct: 132 VHPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGF 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E+GVHR VRISP+DS RRHTSF S+ V P +DD+IE+E+ + D ++D +R+ GAGG Sbjct: 192 LRSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN + VR+TH PTG+VV ER+Q+ N+ A +L+ KLY+LEL+K+E Sbjct: 252 QNVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALT 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L + Sbjct: 312 GEKLENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYLQWQ 365 >gi|255264706|ref|ZP_05344048.1| peptide chain release factor 2 [Thalassiobium sp. R2A62] gi|255107041|gb|EET49715.1| peptide chain release factor 2 [Thalassiobium sp. R2A62] Length = 375 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 195/350 (55%), Positives = 244/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D++ A RL N + EDP LW + A+ LMR+RQ L +AI + I Sbjct: 12 IEKSLVLLAQRLDYETAPYRLEEFNARVEDPTLWDDPEAAQKLMRDRQALVDAIKTYETI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD ++ E L +K K+ E+LL GEAD+ND +LE++ Sbjct: 72 SQELADNVELIELGEMEDDADVVTEAETALATLKDAAAQKELEALLDGEADANDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK +K E G+EAGIKSA+ I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKAGYKVELQSESAGDEAGIKSASYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N + Sbjct: 252 VNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD M ATLA Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTKGVLDGDLDGLMAATLA 360 >gi|187927990|ref|YP_001898477.1| hypothetical protein Rpic_0895 [Ralstonia pickettii 12J] gi|238691788|sp|B2U8V1|RF2_RALPJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|187724880|gb|ACD26045.1| conserved hypothetical protein [Ralstonia pickettii 12J] Length = 367 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 172/350 (49%), Positives = 248/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + L D+D +RL ++ + E+P +W + A+ L RE++ L+ + + ++ Sbjct: 16 LKSRADDLRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L ELA EE D ++ + ++ VE +F + SG D+ + ++++ Sbjct: 76 DEDLTGAAELFELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE +G+ AGIKSA++ ++G A+G+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E++ Sbjct: 256 INKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAA 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 364 >gi|160898706|ref|YP_001564288.1| peptide chain release factor 2 [Delftia acidovorans SPH-1] gi|160364290|gb|ABX35903.1| peptide chain release factor 2 [Delftia acidovorans SPH-1] Length = 386 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 172/345 (49%), Positives = 236/345 (68%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +RL +N EDP +W + +A+ L +E++ LD + ++++ L Sbjct: 40 QIYGGIFDYDAKYERLRTVNASLEDPSVWNDPKKAQELGKEKKLLDGVVLTLQKLTTELA 99 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 DN L E++ EE D + L +++ +E +F + EAD + ++++ AGAGG Sbjct: 100 DNAELFEMSKEEGDETGLLTIEGETAKLQPLIEELEFRRMFGKEADPLNCFVDIQAGAGG 159 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA MLLR Y ++AE++ FK E G+ AGIKSAT+ I+G AYG L+ E GV Sbjct: 160 TEACDWAGMLLRQYLKYAERKGFKATVEEETPGDIAGIKSATIHIEGEYAYGLLRTETGV 219 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSF+S++VYP +DDSI+IEI+ SD R DTYRASGAGGQH+N TD Sbjct: 220 HRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTD 279 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VVQCQ RSQH N+ AW LR+KLYE E+QKR E +KT++G Sbjct: 280 SAVRLTHMPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVG 339 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 340 WGHQIRSYVL-DNSRIKDLRTNVEISATQKVLDGDLDAFIEASLK 383 >gi|53802400|ref|YP_112836.1| peptide chain release factor 2, programmed frameshift [Methylococcus capsulatus str. Bath] gi|53756161|gb|AAU90452.1| peptide chain release factor 2, programmed frameshift [Methylococcus capsulatus str. Bath] Length = 365 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + L G D+D +RL+ + + EDP +W N A+ L +ER L+ ++ + EI Sbjct: 14 LKSRQDALRGYLDFDTKQERLTEVLRELEDPRIWDNPERAQALGKERTQLEGVVNRLNEI 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LL+LA+EEDD ++ + +L + V +F + SGE D N+A+L++ Sbjct: 74 AAGIDDAAELLQLAVEEDDEDSVESVAADLAHYESVVAEMEFRRMFSGEMDPNNAFLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA ML RMY RW E++ FKTE +E GE AGIKSAT+ +G AYGWL+ Sbjct: 134 AGSGGTEAQDWAQMLERMYLRWGERKGFKTELVEESPGEVAGIKSATIRFEGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I+I+I+ +D R D YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIDINPADLRTDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PTG+VVQCQ +RSQH N+ LRAKLYELE+QKR E S Sbjct: 254 VNRTESAVRITHLPTGIVVQCQNQRSQHANRDWCMKQLRAKLYELEMQKRNTEKQKLEDS 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRTN+E +P VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVL-DQSRIKDLRTNVETGNPQAVLDGDLDMFIEASLK 362 >gi|152980486|ref|YP_001352951.1| peptide chain release factor 2 [Janthinobacterium sp. Marseille] gi|166223628|sp|A6SXF4|RF2_JANMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151280563|gb|ABR88973.1| RF-2 peptide chain release factor [Janthinobacterium sp. Marseille] Length = 367 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 179/350 (51%), Positives = 244/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L D+D ++L +N + EDP +W + A+ L +E++ L+ + + +I Sbjct: 16 LTTRATELRRYLDFDVKSEKLDQVNGELEDPDVWNDQKRAQDLGKEKKSLEAIVHTLIKI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D L E+A EE D + ++ Q + VE +F + S D+N+ ++++ Sbjct: 76 DSELNDARDLFEMAREEKDEDTIVAIENDAQELLKLVEGMEFRRMFSNPMDANNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA+MLLR Y R+ E++ FK E LE DGE AGIK+ATL ++G AYG+L+ Sbjct: 136 AGAGGTEAQDWASMLLRQYLRYCERKGFKVEILEQSDGEVAGIKTATLKVEGDYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS + RHTSFSS++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSANGRHTSFSSLFVYPEVDDSIEIDINPADVRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+TH P+G+VVQCQ +RSQH+NKA+AW+ML+AKL+ELE++ R E S Sbjct: 256 INKTDSAVRLTHGPSGIVVQCQNDRSQHRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVL-DQSRIKDLRTNFETGNTKAVLDGDLDDFIAASLK 364 >gi|317051343|ref|YP_004112459.1| peptide chain release factor 2 [Desulfurispirillum indicum S5] gi|316946427|gb|ADU65903.1| Peptide chain release factor 2 [Desulfurispirillum indicum S5] Length = 367 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 198/352 (56%), Positives = 247/352 (70%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ D +RL+ L EDP LW + +A+ ++RE + L +A++ EI Sbjct: 12 MEEKVEFFRRCLDVPAKEERLAELVPMIEDPTLWNDPQQAQGILREDKMLKDALADFNEI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +L E E D S + E + NL +++ V + LLS E D ++AYL ++ Sbjct: 72 HRLLEDVKVLHEFCQE--DESNVDELTQNLAKLEKLVADYELTVLLSDEHDPSNAYLTIN 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDW +ML+RMYTRWAEKRKFK +E +GEEAGIKS TL I+G AYG LK Sbjct: 130 AGAGGTESQDWGSMLMRMYTRWAEKRKFKVTIMEYQEGEEAGIKSVTLFIEGLYAYGNLK 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S++V P +DDSIE++I ESD RIDTYR+SGAGGQH Sbjct: 190 SETGVHRLVRISPFDSNARRHTSFTSVFVSPEIDDSIEVDIRESDLRIDTYRSSGAGGQH 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTGVV QCQ ERSQH+NK QA MLRAKLYELEL+K+ + E S Sbjct: 250 VNTTDSAVRITHTPTGVVTQCQSERSQHQNKEQAMKMLRAKLYELELEKKRQGLREVEDS 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYVL PY+MVKDLRT E + VLDG LD+F+KA L + Sbjct: 310 KMDIAWGSQIRSYVLHPYKMVKDLRTRHETGNAEAVLDGALDEFIKAYLQWQ 361 >gi|323140697|ref|ZP_08075618.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT 12067] gi|322414821|gb|EFY05619.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT 12067] Length = 329 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 158/326 (48%), Positives = 222/326 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ L + ++ + D L E+A EE+D S+L E Sbjct: 1 MGDPTFWDDPEKAQKTAQDVNSLKEEVDGFHKLSAGVDDLEALQEMAAEENDESLLPEMD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + E+E+ + LLSGE D+N+A L +HAGAGGTE+QDW +MLLRM+TR+AE+ Sbjct: 61 ELLAKCRSELEHLELGMLLSGEYDANNAILTLHAGAGGTEAQDWTSMLLRMFTRFAEQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ G+EAG+KSAT+ + G NAYG+L+ E+GVHRLVRISP+D+N+RRHTSF+++ Sbjct: 121 FALEMLDYQPGDEAGVKSATIQVNGHNAYGFLRSEKGVHRLVRISPFDANARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++++ I+ + R+D YR+SGAGGQHVN T SAVR+TH PTG+VVQCQ ERSQ Sbjct: 181 DVMPELDDTVDVNINMDEVRVDVYRSSGAGGQHVNKTSSAVRMTHEPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ + MLRAKLYE E K++ + + I WG QIRSYV QPY MVKD RT Sbjct: 241 IQNRERCLQMLRAKLYEYEKAKQDALVSDIAGDYQNIEWGSQIRSYVFQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E + V+DGDL F++A L ++ Sbjct: 301 CETGNIQAVMDGDLMPFVEAYLRSQQ 326 >gi|325266606|ref|ZP_08133283.1| peptide chain release factor RF2 [Kingella denitrificans ATCC 33394] gi|324982049|gb|EGC17684.1| peptide chain release factor RF2 [Kingella denitrificans ATCC 33394] Length = 367 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 165/350 (47%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ + D+ +RL + +EDP LW + A+ + +ER+ L+ + ++ I Sbjct: 16 LAQRNTDIRAYMDYQGKKERLEEVVGLSEDPELWNDPKRAQDIGKERKLLEGIVLTLENI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + DN L+++ +EE+D ++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ENGIADNRELIDMVVEENDEDGFAAIVADVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA MLLRMY R+AE++ FK E +E DGE AGI +AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLLRMYLRYAERKGFKVEVVEQDDGEIAGINNATIRLEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQ Q RSQH+N+ MLRAKL+ELE++KR E E Sbjct: 256 INKTDSAVRMTHIPTGIVVQSQNSRSQHENRRVCEEMLRAKLFELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 364 >gi|325201177|gb|ADY96632.1| peptide chain release factor 2 [Neisseria meningitidis H44/76] Length = 341 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 169/339 (49%), Positives = 237/339 (69%), Gaps = 1/339 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 1 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 61 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ F+ E LE DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 121 AGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG QIR Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 301 SYVL-DSSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLK 338 >gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str. F0412] gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str. F0412] Length = 330 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 230/325 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N +A+ + +E L NA+ K++ + D ++LE+A+EEDD S+ E Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDSSMESEIK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ I+ VE ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK Sbjct: 61 EYVKAIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E ++ G+EAG KS+T LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ Sbjct: 121 FSIELMDEQPGDEAGTKSSTFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA +LRAKL+ELEL+K+ EI + I WG QIRSYV PY +VKD RTN Sbjct: 241 MQNREQALRLLRAKLFELELEKQAEIKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG+LD F++ L + Sbjct: 301 VETGNVQAVMDGNLDQFIEGFLKKE 325 >gi|255020528|ref|ZP_05292592.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC 51756] gi|254970048|gb|EET27546.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC 51756] Length = 349 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 184/344 (53%), Positives = 249/344 (72%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD RL + ++EDP LW++ A+ L RER L+ + ++E+ +L D+ Sbjct: 5 LGGIFDLPGKAARLEEVQLESEDPKLWEDPERAQALERERTQLEAVVRPLQELDQKLRDS 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 ++ELA+ E D ++L+ + +L+ + VE +F+ + SG D DA++++ AGAGGTE Sbjct: 65 AEMVELAVAEQDEALLEAVAGDLEAARATVEKLEFQRMFSGPQDGADAFVDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY W E R F TE +E+ +GE AGIKSA+L ++G +A+GWL+ E GVHR Sbjct: 125 AQDWANMLLRMYLHWCEARGFSTELVEVSEGEVAGIKSASLHVRGDHAFGWLRTETGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++VYP +DDS EIEI+ +D ++DTYRASGAGGQHVN TDSA Sbjct: 185 LVRKSPFDSGNRRHTSFASVFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+THIPTG+VV CQ +RSQHKN+A+A MLR+KLYELE+QKR E +K++IGWG Sbjct: 245 VRLTHIPTGIVVACQTDRSQHKNRAEAMRMLRSKLYELEMQKRNAEKQALEDTKSDIGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E VLDGDLD F++A L Sbjct: 305 HQIRSYVL-DQSRIKDLRTGVEVGDTQRVLDGDLDGFVEAALKA 347 >gi|229541533|ref|ZP_04430593.1| peptide chain release factor 2 [Bacillus coagulans 36D1] gi|229325953|gb|EEN91628.1| peptide chain release factor 2 [Bacillus coagulans 36D1] Length = 327 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 166/324 (51%), Positives = 224/324 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P+ W + EA+ ++ E L ++ +E++ + D + ELA EE+D + +E Sbjct: 1 MLEPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTHELAKEENDSELKEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ ++ + + LL+G D+N+A LE+H GAGGTESQDW +MLLRMYTRW EK+ Sbjct: 61 AELEAFTEKLNEYELQLLLNGPYDANNAILELHPGAGGTESQDWCSMLLRMYTRWGEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAG+KS TLL KG NAYG+LK E+G+HRLVRISP+D+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGVKSVTLLFKGHNAYGYLKAEKGIHRLVRISPFDAAGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ D R+DTYRASGAGGQH+N T SAVRITHIPTG+VV CQ ERSQ Sbjct: 181 EVMPEIDDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA ML+AKLY+ E++++E+ + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IQNREQAMKMLKAKLYQKEVEEKEKQLAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + V+DG++D F+ A L Sbjct: 301 VETGNVQAVMDGEIDPFIDAYLRA 324 >gi|119476451|ref|ZP_01616802.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2143] gi|119450315|gb|EAW31550.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2143] Length = 364 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 178/359 (49%), Positives = 251/359 (69%), Gaps = 8/359 (2%) Query: 2 KLSRQLNC-------LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 +L+++L GG+FD+D ++L+ + + +P +W + A+ L ++R LD Sbjct: 5 RLNKRLKICLKGRKIFGGIFDYDIRKEQLTEVELELGEPAVWDDPGRAQELGKQRAALDI 64 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 +S I ++ + D LLE+A+EEDD + E + LQ + + +F + SGE D+ Sbjct: 65 VVSTIDKLTVGVSDVAELLEMAVEEDDADTVMEIENELQLLNQHLATLEFRRMFSGEMDA 124 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N+A+LE+ +G+GGTE+QDWA M+ RMY RW E + F TE +E DG+ AGIKSAT+ G Sbjct: 125 NNAFLEIQSGSGGTEAQDWAEMICRMYLRWGESKGFSTELMEASDGDVAGIKSATIRFSG 184 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 A+GWL+ E GVHRLVR SP+DS SRRHTSF+S++V P +D+ I+IEI+ SD R DTYR Sbjct: 185 EYAFGWLRTETGVHRLVRKSPFDSGSRRHTSFASVFVSPEIDEDIDIEINPSDLRTDTYR 244 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN TDSAVRITH P+G+VVQCQ +RSQH+N+ A L+AKLYE+E+ KR E Sbjct: 245 ASGAGGQHVNKTDSAVRITHEPSGIVVQCQSQRSQHQNRDFAMKQLKAKLYEMEMLKRNE 304 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 A E +K +IGWG QIRSYVL Q +KDLRT+++ ++ ++VLDGDLD F++A+L + Sbjct: 305 AAQAQEDNKADIGWGSQIRSYVLDD-QRIKDLRTHVQTSNCNNVLDGDLDLFIEASLKM 362 >gi|262198721|ref|YP_003269930.1| hypothetical protein Hoch_5555 [Haliangium ochraceum DSM 14365] gi|262082068|gb|ACY18037.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365] Length = 378 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 164/353 (46%), Positives = 231/353 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L LGG+FD D R+ L + + DP W N +A+ +RE + + + + + Sbjct: 22 ELENTLEELGGIFDVDEKRLRIEELESISADPAFWDNRQKAEDSLRELKSIKDVVGSYDK 81 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +L D ++LLELA + +D E + I+ ++ +F +LSGE D A L++ Sbjct: 82 LSSKLADAVVLLELAEDAEDAESAIEARTAAEEIERSLDELEFRRMLSGEYDQGGAVLQI 141 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGG ++ DWA MLLRM R+A+ + +K E L+ EEAGIKSATL+I G AYG L Sbjct: 142 NSGAGGVDAADWAQMLLRMILRYADHKGWKAEVLDEQAAEEAGIKSATLVITGEYAYGLL 201 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ +RR TSF+++ V P +DDS+ ++I E + RID YRA GAGGQ Sbjct: 202 KAEMGVHRLVRISPFDAQARRQTSFAAVTVSPDIDDSVHVDIDEGELRIDVYRAGGAGGQ 261 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+P+G+VVQCQ ERSQHKNKA A +LR++LY+ +R+ A Sbjct: 262 HVNKTESAVRITHLPSGIVVQCQNERSQHKNKASAMRVLRSRLYDYLKAERDAAAAEAAP 321 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYVL PY+ V D RT+++ + VLDGDLD F++ L + Sbjct: 322 EKKKIEWGSQIRSYVLAPYRQVTDHRTDLKVGNVDAVLDGDLDPFIRTYLLSE 374 >gi|260575218|ref|ZP_05843218.1| peptide chain release factor 2 [Rhodobacter sp. SW2] gi|259022478|gb|EEW25774.1| peptide chain release factor 2 [Rhodobacter sp. SW2] Length = 375 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 207/352 (58%), Positives = 245/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL +N ED LW + A+ LMRERQ L +AIS K I Sbjct: 12 IGRSLALLGQRMDVETAPHRLEEMNAMIEDGDLWSDPARAQKLMRERQALLDAISTHKLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+E+ E D I+ E L+ + K+ E+LL GEAD ND +LEV+ Sbjct: 72 ETGLRDNVELIEMGEAEGDAEIVSEAEQALRDLVELARGKELEALLDGEADGNDTFLEVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E + DGEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPAGDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ LRA+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREACMVALRARLYQLELDKRNAAVNAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMAATLAMD 362 >gi|196249386|ref|ZP_03148084.1| peptide chain release factor 2 [Geobacillus sp. G11MC16] gi|196211143|gb|EDY05904.1| peptide chain release factor 2 [Geobacillus sp. G11MC16] Length = 327 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 222/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E L + + + +R + + EL EE D + E Sbjct: 1 MAAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 61 EEAKKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A NML+AKLY+ ++++++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREKAINMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F+ A L K Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325 >gi|311070034|ref|YP_003974957.1| peptide chain release factor 2 [Bacillus atrophaeus 1942] gi|310870551|gb|ADP34026.1| peptide chain release factor 2 [Bacillus atrophaeus 1942] Length = 327 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 1 MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLSESHEELQMTHDLLKEEPDEELQLELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R Sbjct: 61 KELKTLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG++K E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYIKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 DVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML++KLY+ +++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNRDRAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDVFIDAYLRSK 325 >gi|281185482|sp|Q0TNE1|RF2_CLOP1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|255529900|gb|ABG84933.2| peptide chain release factor 2, programmed frameshift [Clostridium perfringens ATCC 13124] Length = 362 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 158/350 (45%), Positives = 229/350 (65%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +G + ++ + L K ++ W +V +A+ + +E + + + I K Sbjct: 12 ELKNNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +R+ D +L EL EE+D +E ++ + E++ + E++LSGE D NDA L + Sbjct: 72 LNERIDDVEVLKELM-EENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNDAILTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G GG+++ DW MLLRMYTRW EK+ + E ++ G+EAG+KS TL +KG AYG+L Sbjct: 131 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +IEI+ D RIDTYRA GAGGQ Sbjct: 191 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VVQCQ ERSQ N+ A ML++KL EL+ + +E Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYV PY MVKD RTN+E ++ + V+DGD+D+F+ A L Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360 >gi|225016122|ref|ZP_03705355.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum DSM 5476] gi|224951119|gb|EEG32328.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum DSM 5476] Length = 375 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 172/352 (48%), Positives = 236/352 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L D D VQ ++ L P W ++ ++ ++++ L N I+ ++I Sbjct: 19 LKPKIQQLRAALDVDALVQEVAQLEETAAQPGFWDDLDNSQKVLQKTTRLKNTIAEFEKI 78 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+E A EEDD S E NL+ I+ +V+ ++ +LLSGE D+N+A L H Sbjct: 79 ESLYEDTQTLVEFAFEEDDESCSDEVKANLKSIQDQVDAQRLATLLSGEYDANNAILTFH 138 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DW ML RMY+ WAE+ F+T+ L+ +GEEAGIKS ++LI G NAYG+LK Sbjct: 139 AGAGGTEAMDWVEMLFRMYSHWAERHGFQTKTLDFVEGEEAGIKSISILIVGTNAYGFLK 198 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SP+DS+ RRHTSF+S+ V P VDDSIE+EI D R+DTYR+SGAGGQH Sbjct: 199 SETGVHRLVRVSPFDSSGRRHTSFASLEVIPEVDDSIEVEIRPEDLRVDTYRSSGAGGQH 258 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH+PTG+V CQ ERSQ +N+A A ML++KL E++ ++ + + + Sbjct: 259 VNKTESAIRITHLPTGIVTACQNERSQMQNRAVAMKMLKSKLIEIKEREHLDKISDIKGE 318 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIRSYV PY +VKD RT E + S V+DGDLD F+ A L K Sbjct: 319 QKEIAWGSQIRSYVFMPYTLVKDHRTGFENGNISAVMDGDLDGFINAYLVAK 370 >gi|296330264|ref|ZP_06872745.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676131|ref|YP_003867803.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii str. W23] gi|296152532|gb|EFG93400.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414375|gb|ADM39494.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii str. W23] Length = 327 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E + + ++ K++ D + + +L EE D + E Sbjct: 1 MADPEFWNDQQKAQTVINEANGIKDYVNSYKKLNDSHEELQMTHDLLKEEPDSDLQLELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R Sbjct: 61 KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325 >gi|146277893|ref|YP_001168052.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17025] gi|145556134|gb|ABP70747.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter sphaeroides ATCC 17025] Length = 375 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 201/352 (57%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S + I Sbjct: 12 IKRSLELLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E ++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDTEIVTEAEAAIRTLVETARAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI ++ RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANEIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY++EL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQMELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362 >gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC] gi|330825983|ref|YP_004389286.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans K601] gi|317116757|gb|ADU99245.1| Peptide chain release factor 2 [Alicycliphilus denitrificans BC] gi|329311355|gb|AEB85770.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans K601] Length = 367 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 174/350 (49%), Positives = 236/350 (67%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L D+D +RL +N EDP++W + +A+ L +E++ LD + ++++ Sbjct: 16 LANRTQELRRYLDYDAKYERLRTVNASLEDPNVWNDPKKAQELGKEKKLLDGVVLTLQKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN L E++ EE D + L ++ +E +F + S EAD + Y+++ Sbjct: 76 TAELADNAELYEMSREEGDEAGLLAIEGEAAKLLPLIEELEFRRMFSKEADPLNCYIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA MLLR Y ++AE++ FK E G+ AGIKSAT+ I+G AYG L+ Sbjct: 136 AGAGGTEACDWAGMLLRQYLKYAERKGFKATVDEETPGDVAGIKSATIHIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP VDDSIEI I+ +D R DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSIEININPADVRTDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR+KLYE E+QKR E + Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDT 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVL-DNSRIKDLRTNVEVSATQKVLDGDLDVFIEASLK 364 >gi|221311479|ref|ZP_03593326.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. 168] gi|221315806|ref|ZP_03597611.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320721|ref|ZP_03602015.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325006|ref|ZP_03606300.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. SMY] gi|321313075|ref|YP_004205362.1| peptide chain release factor 2 [Bacillus subtilis BSn5] gi|320019349|gb|ADV94335.1| peptide chain release factor 2 [Bacillus subtilis BSn5] Length = 327 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 1 MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R Sbjct: 61 KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325 >gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27] gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44] gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44] gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27] Length = 330 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 232/325 (71%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N +A+ + +E L NA+ K++ + D ++LE+A++EDD S+ E Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++I+ +E ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK Sbjct: 61 EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E ++ G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ Sbjct: 121 FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY +VKD RT+ Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG+LD F++ L + Sbjct: 301 VETGNVQAVMDGNLDPFIEGFLKKE 325 >gi|303257507|ref|ZP_07343519.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47] gi|302859477|gb|EFL82556.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47] Length = 348 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 173/346 (50%), Positives = 243/346 (70%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D +RL +N EDP +W + A+ L +E++ L++ + IK + L Sbjct: 1 MKSCGGIFDYDQKERRLEEVNQALEDPSIWSDQERAQQLSKEKKRLEDVVLTIKHLTTGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L L E+A EEDD + L+ ++ +K EVE+ +F+ + + E D + +LE+ AGAG Sbjct: 61 SDALELFEMAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+ML RMY ++AE++ FK E +E +G+ AGIK T+ I G AYGWL+ E G Sbjct: 121 GTEAQDWASMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+ T Sbjct: 181 IHRLVRKSPFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+V Q RSQH+NK +A +L+++LYE EL+KR+ E +K++I Sbjct: 241 DSAVRITHIPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL VKDLRTN+E + + VLDG L+ F++A+L Sbjct: 301 SWGHQIRSYVL-DQSRVKDLRTNVETGNTTAVLDGALESFIEASLK 345 >gi|12642654|gb|AAK00335.1|AF320250_8 RF2 [Lactobacillus delbrueckii] Length = 371 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 166/348 (47%), Positives = 214/348 (61%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GGLFD+DN + + K +P W N +A+ L+ E L ++ L Sbjct: 17 LTTSGGLFDFDNISESIEINEAKMAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LEL E D + ++T D L +++ E + LLSGE D ++A +E+H GAG Sbjct: 77 TDEETALELLRLEADADLQKDTEDQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DW NMLLRMY R+ + R K E G+EAG+KS ++ I G NAYG LK E G Sbjct: 137 GTEAMDWGNMLLRMYQRYCDSRGLKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS RRHTSF+S+ V P VDDSIEI+I D RID YR+SGAGGQH+N T Sbjct: 197 VHRLVRISPFDSAKRRHTSFASVEVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITHIPTG+V Q +RSQ +N+ A N +RAKL+ LE +K+ + + + +I Sbjct: 257 SSAVRITHIPTGIVTTSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDI 316 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RT E V+DG LD F+ A L + Sbjct: 317 AWGSQIRSYVFHPYSMVKDHRTGYETADVGGVMDGKLDPFIYAYLQWR 364 >gi|163789840|ref|ZP_02184276.1| peptide chain release factor 2, programmed frameshift [Carnobacterium sp. AT7] gi|159874780|gb|EDP68848.1| peptide chain release factor 2, programmed frameshift [Carnobacterium sp. AT7] Length = 353 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 178/345 (51%), Positives = 240/345 (69%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD +N + ++ N + +P W++ +A+ ++ E L + ++ D Sbjct: 3 LGGLFDLENLERDIAEYNDRMTEPTFWEDAQKAQTVINEANELKEKYNQYNDLVTEKEDL 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +LLE+ EE+D + +E + + +++ + + LLS D N+A +E+H GAGGTE Sbjct: 63 ELLLEMVKEENDEELAKELNSKISPFLDKLDQYELDLLLSDPYDKNNAIIELHPGAGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDW ++LLRMYTRWAEKR FK E L G+EAGIKS TLLIKG NAYG+LK E+GVHR Sbjct: 123 SQDWGSLLLRMYTRWAEKRGFKIETLNYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DS RRHTSF SI V P +DDS++I+I+ D +IDTYRA+GAGGQH+NTTDSA Sbjct: 183 LVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKIDTYRATGAGGQHINTTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+GVVV Q +RSQ KN+ QA +ML+AKLY+LE++++E+ + EIGWG Sbjct: 243 VRITHIPSGVVVASQAQRSQLKNRDQAMSMLKAKLYQLEVEEQEKEMAAIRGEQLEIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV PY MVKD RTN E + + V+DG +D F++A L K Sbjct: 303 SQIRSYVFHPYSMVKDHRTNYETGNIAQVMDGGIDPFIQAYLRSK 347 >gi|331007552|ref|ZP_08330709.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium IMCC1989] gi|330418642|gb|EGG93151.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium IMCC1989] Length = 347 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 173/345 (50%), Positives = 243/345 (70%), Gaps = 1/345 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 CLGG+FD+D ++L+ + + +P +W + A+ L +ER L+ + I+ + + D Sbjct: 2 CLGGIFDYDAKQEQLAEVELELAEPEVWNDPARAQALGQERASLEAIVGTIQTLDTGVVD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LL++A+EE D SIL + D + + ++ +F + SGE D+N+AYL++ +G+GGT Sbjct: 62 ARELLDMAVEEGDESILIDVQDEIDVLSAQLGKLEFRRMFSGETDANNAYLDIQSGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA M+LRMY RW E R FKT E G+ AGIKSAT+ +G A+GWL+ E GVH Sbjct: 122 EAQDWAEMVLRMYLRWGEARGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS+SRRHTSF S++V P +DD+ E+++ +S+ R DTYRASGAGGQHVN TDS Sbjct: 182 RLVRKSPFDSSSRRHTSFCSVFVSPEIDDNFEVDVDKSEVREDTYRASGAGGQHVNKTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH +G+VVQCQ +RSQH+N+ AW MLRA+LYE ELQ+R E +K++IGW Sbjct: 242 AVRLTHEASGIVVQCQSQRSQHQNRDTAWKMLRARLYEQELQRRNADKQAQEDNKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSYVL Q +KDLRTN++ ++ VLDG LD F++A+L Sbjct: 302 GSQIRSYVLDD-QRIKDLRTNVQTSNCQAVLDGSLDQFIEASLKA 345 >gi|85708766|ref|ZP_01039832.1| protein chain release factor B [Erythrobacter sp. NAP1] gi|85690300|gb|EAQ30303.1| protein chain release factor B [Erythrobacter sp. NAP1] Length = 375 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 200/353 (56%), Positives = 264/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DW+ A++RL LN + +DP LW + EA+ + RE++ L++A++ + E Sbjct: 11 RIEAALALVRQSLDWERALRRLDELNARVQDPTLWDDPKEAQKISREQKQLEDAVNTVNE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +E+ E + SI+ + +L+++ + + ++LLSGEAD ND YLE+ Sbjct: 71 ISAEMGDAVEFIEMGEAEGEESIVNDGLKSLEKLAARADADKVQALLSGEADGNDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R FK E +E G++AGIKSATLL+KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGDNAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPV+DD I+IEI+ +D +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSAAKRHTSFSSVWVYPVIDDDIDIEINPADLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV Q +RSQHKN+A A NML+A+L+E E+ +RE A+ Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVLQPYQMVKDLRT + +SP VLDGD+DD++ A LA + Sbjct: 311 EKSEIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPDRVLDGDIDDYISAALAQR 363 >gi|163857078|ref|YP_001631376.1| peptide chain release factor 2 [Bordetella petrii DSM 12804] gi|163260806|emb|CAP43108.1| peptide chain release factor 2 [Bordetella petrii] Length = 337 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 168/334 (50%), Positives = 241/334 (72%), Gaps = 1/334 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +RL +N + EDP +W + A+ L RE++ L++ ++ + ++ + D L L ELA Sbjct: 2 KAERLQVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVTTLTALRSGVADALELFELASA 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +DD + L+ + + ++E +F + S AD + +L++ AGAGGTE+QDWA+MLL Sbjct: 62 DDDDATLESIESDADGFQQQLEGLEFRRMFSNPADPLNCFLDIQAGAGGTEAQDWASMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 R Y ++AE++ FK E LE +GE AGIKSAT+ ++G A+G+L+ E GVHRLVR SP+DS Sbjct: 122 RQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGDYAFGYLRTETGVHRLVRKSPFDS 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RHTSF+S++VYP VDDS EI+++ +D R+DTYRASGAGGQH+N TDSAVR+TH+PTG Sbjct: 182 SGGRHTSFASVFVYPEVDDSFEIDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHLPTG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SKT++GWG QIRSYVL Sbjct: 242 IVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGWGHQIRSYVL- 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 301 DQSRIKDLRTNVEISNTQKVLDGDLDTFIQASLK 334 >gi|73914009|sp|Q9CP66|RF2_PASMU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 365 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 179/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G D+D V+RL +N + E P +W +A+ L +ER L+ ++ I + Sbjct: 14 LTERTQVLRGYLDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVALEGVVNTIHTL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E +D + E L+ ++ ++ +F + SG+ D+ D Y+++ Sbjct: 74 DQGLEDVEGLLELAIEAEDEATFHEAVAELEELEQQLAKLEFRRMFSGQHDAADCYVDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AGIKSAT+ + G A+GWL+ Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIKSATIKVSGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+I+I+ +D RID YRASGAGGQH Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q L+AKLYE+ELQK+ E + Sbjct: 254 VNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363 >gi|319942340|ref|ZP_08016655.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B] gi|319804213|gb|EFW01113.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B] Length = 354 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 171/344 (49%), Positives = 236/344 (68%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG+FD D +RL +N + E+P LW + A+ + +E++ LD+ + + + D Sbjct: 2 NFGGIFDVDRKARRLEEVNREIENPDLWNDPKHAQEVSKEKKMLDDIVGSFNRLTQGIAD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L EL+L E+D L+ +++ RI+ EV +F+ + + DS + YLE+ +GAGGT Sbjct: 62 AGELFELSLAEEDFDSLEVIGEDVDRIEHEVAQLEFKRMFNQPMDSANCYLEIQSGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA+ML RMY R+AE++ FK E GE AGIKS TL I+G AYG L+ E G+H Sbjct: 122 EAQDWASMLERMYMRYAERKGFKVTLEEETPGEVAGIKSCTLFIEGEWAYGTLRTETGIH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+D+N+RRHTSF+S++VYP VDDSI+IEI+ +D ID +RASGAGGQH+ T+S Sbjct: 182 RLVRKSPFDANARRHTSFTSVYVYPEVDDSIDIEINPADLSIDVFRASGAGGQHIQKTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRI H PTG++ CQ +RSQH+N+ +A L+AKLYELE++KR E E SK++IGW Sbjct: 242 AVRIHHKPTGIITICQDDRSQHRNREKAMQQLKAKLYELEMRKRMEAQTKLEESKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL VKDLRT +E + VLDGDLD F++A+L Sbjct: 302 GHQIRSYVL-DQSRVKDLRTGVETGNTGGVLDGDLDQFIEASLK 344 >gi|253580007|ref|ZP_04857274.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39B_FAA] gi|251848526|gb|EES76489.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39BFAA] Length = 343 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 157/336 (46%), Positives = 225/336 (66%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N Q++ L + E P W + ++ M+E + + + + + + ++ D ++E+ Sbjct: 3 NKEQKVEELEREMEAPDFWDDAEVSQKKMKELKDMKDDMETYQNLVTQMEDMETMIEMGY 62 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE+D +++ E + L + + + + ++LLSGE DS +A ++++AGAGGTE+ DW ML Sbjct: 63 EENDPALIPEIQEMLDEFQKDFDNIRIKTLLSGEYDSENAIIKLNAGAGGTEACDWCGML 122 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+RWA+K+ F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP++ Sbjct: 123 YRMYSRWADKKGFTLEVLDYLDGDEAGIKSVTFQVNGTNAYGYLKSEKGVHRLVRISPFN 182 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + +R TSF S V P + +++EI++ + RIDTYR+SGAGGQH+N T SA+RITH PT Sbjct: 183 AAGKRQTSFVSCDVMPDIKKDLDVEINDDEIRIDTYRSSGAGGQHINKTSSAIRITHYPT 242 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ ERSQH NK +A ML+AKLY L+ Q+ EE + T+IGWG QIRSYV+ Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVM 302 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QPY MVKD RTN E + VLDG +D F+ A L Sbjct: 303 QPYTMVKDHRTNEETGNVDAVLDGGIDIFINAYLKW 338 >gi|70728519|ref|YP_258268.1| peptide chain release factor 2, programmed frameshift [Pseudomonas fluorescens Pf-5] gi|68342818|gb|AAY90424.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens Pf-5] Length = 364 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + G D+D +RL+ +N + EDP +W A+ L RER L + + E+ Sbjct: 13 LSERSETIRGYLDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVETLDEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL++A+EE+D + + L R++ + +F + S E D N+AYL++ Sbjct: 73 NGGLADCRDLLDMAVEEEDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQH Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYE E+QKR + E + Sbjct: 253 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D++++A+L Sbjct: 313 KSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 361 >gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3] gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3] Length = 377 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 161/352 (45%), Positives = 238/352 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + +++ LG D A + L K W ++ ++ ++++ + L + I+ + Sbjct: 16 NMRPEIDDLGRALGLDAARAEVRELEEKAAQQDFWNDIENSQSVLQKTRQLKDKIASYEA 75 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L L+ELA EE+D S+L E ++ + ++ +++ + +LL+GE D+ +A L Sbjct: 76 LRRKTDDTLALIELADEEEDLSVLAEAAEAVDSVRAQIDTMRLATLLTGEYDAKNAILTF 135 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDWA ML RMYTRWAE+ F + L+ DGEEAG+KSA++LI+G NAYG+L Sbjct: 136 HAGAGGTEAQDWAEMLYRMYTRWAERHGFNVQVLDYLDGEEAGLKSASVLIEGLNAYGYL 195 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+DS+ RRHTSF+S+ V P +DDSIE++I D ++D +R+SGAGGQ Sbjct: 196 KSEIGVHRLVRVSPFDSSGRRHTSFASVEVMPEIDDSIEVDIRPEDIKMDVFRSSGAGGQ 255 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T SAVR+TH+PTG+VV CQ ERSQH+N+ A ML++KL E++ ++ + + Sbjct: 256 HINKTSSAVRLTHLPTGIVVSCQNERSQHQNREMAMRMLKSKLVEIKEREHYDKIEDIKG 315 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI WG QIRSYV PY +VKD RT+ E + V+DGDLD F+ A L Sbjct: 316 VQKEIAWGSQIRSYVFMPYTLVKDHRTSFESGNIGAVMDGDLDGFINAYLKA 367 >gi|256842745|ref|ZP_05548233.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN] gi|256614165|gb|EEU19366.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN] Length = 354 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 160/345 (46%), Positives = 211/345 (61%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD D + + K P W N +A+ L+ E L ++Q D Sbjct: 2 TLGGLFDLDAIDESIEINENKMAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYED 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +EL EE D + +E +L ++ + + + LLSG+ DS++A +E+H GAGGT Sbjct: 62 ETTAVELLREEPDPDLQKEVEADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ DW MLLRMY R+ + FK E + GEEAG+KS + I G NAYG LK E GVH Sbjct: 122 EAMDWGQMLLRMYQRYCDTAGFKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+D+ RRHTSF+S+ V P VDDSI+I+I D R+D YR+SGAGGQH+N T S Sbjct: 182 RLVRISPFDAAKRRHTSFASVEVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+V Q +RSQ +N+ A N LRAKL+ LE +K+ + + + EIGW Sbjct: 242 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSYV PY +VKDLRT E V+DG L F+ + L Sbjct: 302 GSQIRSYVFHPYNLVKDLRTGHETADAQGVMDGKLQPFIYSYLQW 346 >gi|308175261|ref|YP_003921966.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7] gi|307608125|emb|CBI44496.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7] gi|328555234|gb|AEB25726.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208] gi|328913595|gb|AEB65191.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3] Length = 327 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+ ++ E L + ++ ++ + + + EL EE D + QE Sbjct: 1 MAEPEFWNDQQKAQTVINEANGLKDYVNSYHQLSESHEELQMTYELLKEEPDQELQQELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R Sbjct: 61 KELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 CKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ I+IEI D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDIFIDAYLRSK 325 >gi|40063231|gb|AAR38058.1| peptide chain release factor 2 [uncultured marine bacterium 577] Length = 359 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 171/345 (49%), Positives = 245/345 (71%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +R ++ EDP +W++ A+ L RE++ LD + ++ I+ +L Sbjct: 13 QSFGGIFDFDAKKERSDEISFLEEDPEIWKDSKRAQELGREKKILDKIVLTLETIKLQLQ 72 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D++ L ++A EE+D +L+ + +++ V +F ++ S D N+ +LE+ +G+GG Sbjct: 73 DSIDLFQMAKEENDIVVLESIRADAAKLETNVANMEFCNMFSNPMDPNNCFLEIQSGSGG 132 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY R+ E+R +K E LE GE AGIKSA+L I G AYG+L+ E G+ Sbjct: 133 TEAQDWAAMLERMYLRYCERRDYKVEVLEESSGEVAGIKSASLKISGDYAYGYLRTESGI 192 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS SRRHTSF+S+++YP VDD+IEIEI+ +D R+DTYRASGAGGQH+N TD Sbjct: 193 HRLVRKSPFDSGSRRHTSFASVFIYPEVDDTIEIEINPADLRVDTYRASGAGGQHINKTD 252 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH P+G+VV CQ +RSQH+N+A+A ML+++LYE+EL+K+ + E SKT+IG Sbjct: 253 SAIRITHNPSGIVVSCQNDRSQHRNRAEAMAMLKSRLYEVELRKQSDEKQAMEDSKTDIG 312 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRT +E + VLDG LD+F+K +L Sbjct: 313 WGHQIRSYVL-DQSRIKDLRTGLEIGNTQGVLDGGLDEFIKTSLK 356 >gi|221639399|ref|YP_002525661.1| peptide chain release factor 2 [Rhodobacter sphaeroides KD131] gi|221160180|gb|ACM01160.1| Bacterial peptide chain release factor 2 [Rhodobacter sphaeroides KD131] Length = 375 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 204/352 (57%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S K I Sbjct: 12 IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYKLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E ++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDEEIVTEAEAAIRALVETARAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362 >gi|90409172|ref|ZP_01217287.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3] gi|90309717|gb|EAS37887.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3] Length = 349 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 173/342 (50%), Positives = 241/342 (70%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D V+RL + + E P +W + A+ L +ER L+ + IK ++ + L Sbjct: 6 GGIFDYDVKVERLEEVTRELESPEVWNDPERAQALGKERSALELIVETIKALEIGCDEIL 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+ELA++E D E ++ ++ ++E +F + SG+ DS YL++ +G+GGTE+ Sbjct: 66 MLVELAVDEQDQDTFDEAANETLELEKKLEVLEFRRMFSGKNDSCSCYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWANMLLRMY RW E +KTE +E+ G+ AGIK AT+ G AYGWL+ E GVHRL Sbjct: 126 QDWANMLLRMYLRWGEANGYKTELMEVSAGDVAGIKGATIRFSGEYAYGWLRTETGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ +RHTSF+S +VYP V+D+I+I I+ ++ RID YRASGAGGQHVNTT+SAV Sbjct: 186 VRKSPFDSSGKRHTSFASAFVYPEVEDNIDIVINPAELRIDVYRASGAGGQHVNTTESAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT +VVQCQ +RSQHKNK QA L+AKLYE E+Q + I E +K++IGWG Sbjct: 246 RITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLYEHEVQIQNVEKQISEDNKSDIGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E +P VLDG+L++F++A+L Sbjct: 306 QIRSYVLDD-ARIKDLRTGVESRNPQRVLDGELNEFIEASLK 346 >gi|291486081|dbj|BAI87156.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto BEST195] Length = 327 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 1 MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R Sbjct: 61 KELKSLTKDFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIDIDIRAEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325 >gi|253997054|ref|YP_003049118.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8] gi|253983733|gb|ACT48591.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8] Length = 367 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 240/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + L G D+++ QRL +N EDP +W + +++ L +E++ L+ ++ + + Sbjct: 16 LSERNHALRGYLDFESKSQRLEEVNGLLEDPKIWDDNAKSQALGKEKRTLELVVNTLIHV 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q L D L E+A EE+D L + ++ E+ +F + SGE DS + ++E Sbjct: 76 QGGLKDAQELFEMAREENDDDTLLSVEHDSLALEKEIAEMEFRRMFSGELDSANCFIEFQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWANMLLRMY R+ E++ FK E LE +G+ AGIK A++ + G AYG L+ Sbjct: 136 SGSGGTEAQDWANMLLRMYLRYCERKGFKVEVLEESEGDVAGIKGASIKVSGDYAYGTLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S+ ++P VDDSIEI+I+ +D R+DTYRASGAGGQH Sbjct: 196 TENGVHRLVRKSPFDSNAKRHTSFASVQIFPEVDDSIEIDINPADLRVDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPT VVQCQ +RSQH+N+ +A NML+ LY LEL KR + E + Sbjct: 256 INKTDSAVRITHIPTNTVVQCQNDRSQHRNREEAMNMLKGALYNLELNKRNQEKQALEDA 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT+IGWG QIRSYVL +KDLRT +E + VLDGDLD F+ +L Sbjct: 316 KTDIGWGHQIRSYVL-DQSRIKDLRTGVEIGNTQGVLDGDLDPFITESLK 364 >gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748] gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748] Length = 330 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 230/325 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ + +E L NA+ K++ + D ++LE+A+EEDD S+ E Sbjct: 1 MSDPTFWDDPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDRSLEGEIK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 D +Q+I+ VE ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK Sbjct: 61 DYVQQIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E ++ G+EAG KSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ Sbjct: 121 FSIELMDEQPGDEAGTKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGIVVQCQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY +VKD RT Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG+LD FM+ L + Sbjct: 301 VETGNVQSVMDGNLDQFMEGFLKKE 325 >gi|332974657|gb|EGK11574.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330] Length = 367 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 169/350 (48%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ + + D+ RL + +EDP LW + A+ + +ER+ L+ + + +I Sbjct: 16 LAKRNDDIRVYMDYQGKKDRLEEVVGLSEDPDLWNDPKRAQDIGKERKLLEGVVLTLDKI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + DN L+++ +EE D ++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 TNGIDDNRELIDMVVEEGDADGFAAIIADVAELEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA MLLRMYTR+AE++ FK E +E DGE AGI +ATL I+G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP VDDS E+EI+ +D R DTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEVDDSFEVEINPADLRTDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+VVQ Q RSQH+N+ MLR+KL+ELE++KR E E Sbjct: 256 INKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT+ E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTSYEVGNTKAVLDGDLDGFIEASLK 364 >gi|149184652|ref|ZP_01862970.1| protein chain release factor B [Erythrobacter sp. SD-21] gi|148831972|gb|EDL50405.1| protein chain release factor B [Erythrobacter sp. SD-21] Length = 375 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 199/353 (56%), Positives = 262/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DW+ A++RL L+ + +DP LW + +A+ + +E++ L+ AI+ ++E Sbjct: 11 RIEAALALVRQSLDWERALRRLDELDARVQDPTLWDDPKQAQAITQEQKRLETAINTVRE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + D + +E+ E D ++ E +L + + + ++LLSGEAD ND+Y+E+ Sbjct: 71 IESEMGDAMEFVEMGEAEGDDDVVNEGLTSLSTLADRADRDKVQALLSGEADGNDSYIEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R FK E +E G++AGIKSATLL+KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD I+IEI+ SD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIDIEINPSDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV Q +RSQHKNKA A NML+A+L+E E+ +RE A+ Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNKATAMNMLKARLFEREMAEREAAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++IGWG QIRSYVLQPYQMVKDLRT + +P DVLDG LD F+ A LA + Sbjct: 311 EKSDIGWGHQIRSYVLQPYQMVKDLRTGVTSPTPDDVLDGALDPFISAALAQR 363 >gi|116617317|ref|YP_817688.1| peptide chain release factor 2 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272482|sp|Q03ZQ7|RF2_LEUMM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116096164|gb|ABJ61315.1| bacterial peptide chain release factor 2 (bRF-2) [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 372 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 222/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + G D + + ++ + +P W + +A+ ++ E L N + Sbjct: 13 MQENIERFRGTLDMEALTEEIADYENRMTEPDFWNDNEKAQKVIEENNVLKNRRDSFLNL 72 Query: 63 QDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ + +L+E+A+E+ +D L E + + + +++ E LL+ D+N+A LE+ Sbjct: 73 TNQVEELELLIEMAVEDPEDEDTLGELEAGVAKAQKDIDAYNLEQLLTEPYDANNAILEI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G+GGTES DW L RMYTRWA++ F+ E L+ H G+EAGI SAT+ + G NAYG+L Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+GVHR VRISP+DS RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN + VR+TH PTG+VV ER+Q+ N+ A +L++KLY+LEL+K+E Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L + Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQ 365 >gi|293610588|ref|ZP_06692888.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826932|gb|EFF85297.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 337 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 175/334 (52%), Positives = 238/334 (71%), Gaps = 1/334 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +RL + + EDP +W + A+ + +E+ L+N I+ + + +L D +L+LA+E Sbjct: 2 KKERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVINVLDGLSTQLEDAKAMLDLAVE 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 DD S+L++ L + E+ +F + S D N Y+E+ +G+GGTE+QDWA+MLL Sbjct: 62 ADDESLLEDVQSELGAAEDELAKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW E+ FK E +E+ DG+ AGIKSAT+ ++G AYGWL+ E GVHRLVR SP+DS Sbjct: 122 RMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDS 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR+THIPTG Sbjct: 182 GNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ +RSQH N+ AW LRA+LYELE+QKR E A E SK++IGWG QIRSYVL Sbjct: 242 IVVACQNQRSQHANRDHAWKQLRARLYELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLD 301 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 302 DS-RIKDLRTGVENSNTGAVLDGDLDRFIEASLK 334 >gi|121602405|ref|YP_989094.1| peptide chain release factor 2 [Bartonella bacilliformis KC583] gi|120614582|gb|ABM45183.1| peptide chain release factor 2 [Bartonella bacilliformis KC583] Length = 376 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 227/353 (64%), Positives = 283/353 (80%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L DWD +++RL +LN K EDP LW N +A+ +MRERQ L+++I+ I+ Sbjct: 11 EIQQALQLLRRHLDWDQSLKRLEYLNQKAEDPSLWDNAQQAQDMMRERQSLEDSINSIEL 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +L +++ L+ + EE D ++ + + ++ +K E++ +Q + LLSGEADSND YLE+ Sbjct: 71 FTQKLEESIELIAMGEEERDVDVIADAENTIRELKNEIDKRQIDILLSGEADSNDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA MLLRMY RW E+ K K E LEI+DGEEAGIKSAT+LIKG NAYG + Sbjct: 131 HAGAGGTESQDWAAMLLRMYIRWVEQHKMKVEVLEINDGEEAGIKSATILIKGHNAYGMI 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I++++SESD RIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDNIKVDVSESDVRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE N E+ Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAVEA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P VL+GDLD F++A LA + Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGDLDRFIEAALAQR 363 >gi|71733798|ref|YP_276012.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554351|gb|AAZ33562.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. phaseolicola 1448A] Length = 368 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 184/350 (52%), Positives = 248/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + G D+D+ RL+ +N + EDP++W N A+ L RER L + + E+ Sbjct: 17 LSERSETIRGYLDYDHKHDRLTEVNRELEDPNVWNNPTYAQELGRERSLLAQIVETLDEM 76 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ Sbjct: 77 SSGLADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQ 136 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ Sbjct: 137 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 196 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQH Sbjct: 197 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQH 256 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E + Sbjct: 257 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDT 316 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 317 KSDIGWGHQIRSYVL-DASRIKDLRTNIERSDCDKVLDGDIDEYLIASLK 365 >gi|209548908|ref|YP_002280825.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534664|gb|ACI54599.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 376 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 241/353 (68%), Positives = 296/353 (83%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + L DWD A++RL +LN K EDP+LW + EA+ LMRERQ LD+ IS +K+ Sbjct: 11 ETKQAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDSTEAQKLMRERQQLDDGISGVKQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ +L DN+ L+EL EE D +++E D L+ +K E +Q E++LSGEAD ND YLEV Sbjct: 71 LEQQLNDNIELIELGEEEGDEGVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWL Sbjct: 131 HSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E DCRIDTYR+SGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+ + Sbjct: 251 HVNTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SKT+IGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDG+L++FM+A LA + Sbjct: 311 SKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGELNEFMEAALAHR 363 >gi|303252568|ref|ZP_07338731.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247319|ref|ZP_07529367.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648536|gb|EFL78729.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856163|gb|EFM88318.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 347 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 173/344 (50%), Positives = 239/344 (69%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ I+ + + D Sbjct: 3 FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+E +D E ++ ++ +F+ + SG+ D+ D Y+++ AG+GGTE Sbjct: 63 EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+HR Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+ +VVQCQ RSQH+NK Q L+AKLYE+E+ K+ E SK++IGWG Sbjct: 243 VRITHIPSDIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 303 SQIRSYVLDDS-RIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 345 >gi|255926563|gb|ABG86573.2| peptide chain release factor 2 [Clostridium perfringens SM101] Length = 364 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 156/350 (44%), Positives = 229/350 (65%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +G + ++ + L K ++ W +V +A+ + +E + + + I K Sbjct: 14 ELKNNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +R+ D +L EL +EE+D +E ++ + E++ + E++LSGE D N+A L + Sbjct: 74 LNERIDDVEVLKEL-MEENDEETAKEIISEVKALSKEIDTLKIETILSGEYDRNNAILTL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G GG+++ DW MLLRMYTRW EK+ + E ++ G+EAG+KS TL +KG AYG+L Sbjct: 133 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +IEI+ D RIDTYRA GAGGQ Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VVQCQ ERSQ N+ A ML++KL EL+ + +E Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYV PY MVKD RTN+E ++ + V+ GD+D+F+ A L Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362 >gi|300913271|ref|ZP_07130588.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561] gi|300889956|gb|EFK85101.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561] Length = 368 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 167/353 (47%), Positives = 235/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + ++ G LFD ++ + + ++ K DP W ++ +++ L ++++ L + Sbjct: 11 NMIEEIKKWGFLFDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL LEE D SI E + +K ++E + ++LL+G D N+A L + Sbjct: 71 LVSKWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAILSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GGTE+QDWA MLLRMYTRWA + F+ E L+ GEEAGIKS TL+IKGP AYG+L Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+ + V P +++ IE+EI D +IDTYRASGAGGQ Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIRSYV QPY +VKD RTN E + V+DG++D F+ A L K Sbjct: 311 EHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363 >gi|148556746|ref|YP_001264328.1| peptide chain release factor 2 [Sphingomonas wittichii RW1] gi|148501936|gb|ABQ70190.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingomonas wittichii RW1] Length = 375 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 208/353 (58%), Positives = 267/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++ + + DWD A++RL LN + EDP LW + A+ +MRER+ LD A+S +K Sbjct: 11 QINQAMALVRRFLDWDRALRRLDELNNRVEDPKLWDDAKAAQEVMRERRRLDEAVSAVKA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D + L+ELA EDD +++ + L + E + +LL+GEAD+N+ Y+EV Sbjct: 71 IEQERDDTIELIELAEAEDDTALVDDGVQALAALAERAEKDKIGALLAGEADANNTYIEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTESQDWA ML RMY RWAE+ +K E ++ H GE+AGIKSATLL++G NAYG+ Sbjct: 131 NSGAGGTESQDWAGMLQRMYARWAERHGYKVELIDFHAGEQAGIKSATLLVRGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS +RRHTSF+S+WVYP VDD I+IE+ E D +IDTYR+SGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSAARRHTSFASVWVYPEVDDDIDIEVLEKDLKIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG++V CQ +RSQHKN+A+A L+A+LYE ELQKRE A G + Sbjct: 251 HVNTTDSAVRITHVPTGIIVACQNQRSQHKNRAEAMKQLKARLYEQELQKREAEAMAGYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQMVKDLRT T+PSDVLDGDLD FM A L+ + Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGTTSTAPSDVLDGDLDRFMAAALSQR 363 >gi|297618035|ref|YP_003703194.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM 12680] gi|297145872|gb|ADI02629.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM 12680] Length = 371 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 164/353 (46%), Positives = 230/353 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ ++L +GG D + R+ L KT P W + EA+ +++E L + + Sbjct: 12 EIKKRLEEIGGSLDVEGLKHRIKKLEDKTCQPGFWDDNQEAQKVVKEMSGLKERVDSYES 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D LLELA E+D + +E + L R+ + + GE D ++A + + Sbjct: 72 LVREIEDISALLELAEAEEDEELYREAAAELARLNRRFREYELSIMFKGEHDDSNAIVSL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGT++QDW MLLRMYTRWAE ++ + ++ GEEAGIKS TLLIKG AYG + Sbjct: 132 HAGAGGTDAQDWVEMLLRMYTRWAEDNGYEVDIMDYLPGEEAGIKSVTLLIKGKYAYGKM 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRL+R+SP+D++ RRHTSF+ + V P + D +E+ IS D RIDT+RA GAGGQ Sbjct: 192 RAEAGVHRLIRVSPFDASGRRHTSFALVSVLPEIQDDVEVTISSDDLRIDTFRAGGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+P+G+VVQCQ ERSQ+ NK A +LRAKLYEL+ +++EE + Sbjct: 252 HVNKTDSAVRITHLPSGIVVQCQNERSQYANKLAAMKILRAKLYELKQREQEESLQKLKG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIR+YVL P+ +VKD RT +E + + VLDGD++DF+ A L K Sbjct: 312 EYKEIAWGNQIRTYVLNPFSLVKDHRTGLEVGNVNAVLDGDINDFITAYLGQK 364 >gi|317121051|ref|YP_004101054.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter marianensis DSM 12885] gi|315591031|gb|ADU50327.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter marianensis DSM 12885] Length = 416 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 158/352 (44%), Positives = 215/352 (61%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D + + + DP W A+ +R+ + L + + + Sbjct: 12 LRPRLEELRDDLDLAGKRREIERIEQAMTDPSFWDEPDRAQQQVRQLKVLKGPVEHYEAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + +L D +L ELA EE D S++ E + + + + + + + LL+G D DA + +H Sbjct: 72 ERQLDDLQVLAELAAEEADVSVIPELEEGIAKAEEGLRQLELDLLLNGPYDGYDAIVSLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA ML RMYTRWAE ++ E L++ +GEEAGIKS T ++GPNAYG+L+ Sbjct: 132 PGAGGTESQDWAQMLWRMYTRWAEDHGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLR 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+ RRHTSF+S+ V P + DS EIEI D RID +RA G GGQH Sbjct: 192 SEHGVHRLVRISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRI H+PTG+V CQ ERSQH N+ A +L+A+L ++R + Sbjct: 252 VNKTESAVRIVHLPTGIVATCQNERSQHANRETAMKILKARLARYYEEQRLKEIAALRGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIRSYV QPY +VKD RT +E + V+DG LD F+ A L + Sbjct: 312 VGEIAWGNQIRSYVFQPYTLVKDHRTGVEVGNVQAVMDGHLDPFINAYLRWE 363 >gi|77463535|ref|YP_353039.1| peptide chain release factor 2 [Rhodobacter sphaeroides 2.4.1] gi|332558415|ref|ZP_08412737.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N] gi|77387953|gb|ABA79138.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter sphaeroides 2.4.1] gi|332276127|gb|EGJ21442.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N] Length = 375 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 203/352 (57%), Positives = 245/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S + I Sbjct: 12 IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E +++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETARAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362 >gi|33596662|ref|NP_884305.1| peptide chain release factor 2 [Bordetella parapertussis 12822] gi|81579293|sp|Q7W8T4|RF2_BORPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|33573363|emb|CAE37347.1| peptide chain release factor 2 [Bordetella parapertussis] Length = 367 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 170/349 (48%), Positives = 248/349 (71%), Gaps = 1/349 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + L D+D +RL +N + EDP +W + A+ L RE++ L++ + + E+ Sbjct: 17 AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D+ L+ELAL + D + L+ ++ R + ++E +F + + AD + ++++ A Sbjct: 77 SGLADSCELVELALADSDDATLEAIEHDVDRFQEKLETLEFRRMFANPADPLNCFVDIQA 136 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA+MLLR Y ++AE++ FK E LE +G+ AG+KSAT+ I+G A+G+L+ Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 196 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+ Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 256 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SK Sbjct: 257 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 316 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 T++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 317 TDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 364 >gi|113969170|ref|YP_732963.1| peptide chain release factor 2 [Shewanella sp. MR-4] gi|114048688|ref|YP_739238.1| peptide chain release factor 2 [Shewanella sp. MR-7] gi|113883854|gb|ABI37906.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. MR-4] gi|113890130|gb|ABI44181.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. MR-7] Length = 352 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 172/343 (50%), Positives = 233/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL ++ + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ET+ L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349 >gi|284008432|emb|CBA74885.1| peptide chain release factor 2 [Arsenophonus nasoniae] Length = 332 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 176/330 (53%), Positives = 229/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 +N + E P +W A+ L +ER L+ + I + L D LL+LA+E DD Sbjct: 2 EEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDALIQGLDDVSGLLDLAIEADDED 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E L +++ ++ +F + SG+ DS + YL++ AG+GGTE+QDWA+ML+RMY R Sbjct: 62 TFHEAVAELAQLEGKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQDWASMLMRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE + FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRH Sbjct: 122 WAESKGFKTEIIEASDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QC Sbjct: 182 TSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTGIVTQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA+ L+AKLYELE+QK+ E +K++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAFKQLKAKLYELEMQKKNADKQALEENKSDIGWGSQIRSYVLDDS-RI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E + VLDGDLD F++A+L Sbjct: 301 KDLRTGVENRNTQAVLDGDLDKFIEASLKA 330 >gi|295092740|emb|CBK78847.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium cf. saccharolyticum K10] Length = 333 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 153/324 (47%), Positives = 220/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + + LMRE ++L + + ++++ D ++LE+ EE+D S++ E Sbjct: 1 MEEPGFWDDPETSTKLMREAKNLKDTVENYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++E + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RW++K+ Sbjct: 61 GMMDDFVAKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWSDKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F T ++ DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S +R TSF S Sbjct: 121 FTTSVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + + +++EI+ + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A ML+ KLY ++ ++ E + +I +G QIRSYV+QPY +VKD RT Sbjct: 241 FQNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + VLDGD+D F+ A L Sbjct: 301 AESGNVNAVLDGDIDLFISAYLKW 324 >gi|328956713|ref|YP_004374099.1| peptide chain release factor 2 [Carnobacterium sp. 17-4] gi|328673037|gb|AEB29083.1| peptide chain release factor 2 [Carnobacterium sp. 17-4] Length = 351 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 178/345 (51%), Positives = 239/345 (69%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +GGLFD + + ++ N + +P W + +A+ ++ E L + K++ + Sbjct: 1 MGGLFDLETLERDIAEYNDRMTEPTFWDDAQKAQAIINEANELKEKYNQYKDLLTEKEEL 60 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +LLE+ EE+D +++E + +++ + E LLS D N+A +E+H GAGGTE Sbjct: 61 DLLLEMVKEENDEELVKELDSKINPFLDKLDQYELELLLSDPYDKNNAIIELHPGAGGTE 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDW N+LLRMYTRWAEKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHR Sbjct: 121 SQDWGNLLLRMYTRWAEKRGFKIETLDYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHR 180 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DS RRHTSF SI V P +DDS++I+I+ D ++DTYRASGAGGQH+NTTDSA Sbjct: 181 LVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKVDTYRASGAGGQHINTTDSA 240 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTGVVV Q +RSQ KN+ QA +ML+AKL++LE+++ E+ + EIGWG Sbjct: 241 VRITHMPTGVVVASQAQRSQLKNREQAMSMLKAKLHQLEVEEHEKEMAAIRGEQLEIGWG 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV PY MVKD RTN E + S V+DG +D F++A L K Sbjct: 301 SQIRSYVFHPYSMVKDHRTNYETGNISQVMDGGIDPFIQAYLRSK 345 >gi|323703031|ref|ZP_08114687.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM 574] gi|323532044|gb|EGB21927.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM 574] Length = 326 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 160/326 (49%), Positives = 215/326 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W N ++ + ++ L + + ++ D ++LEL EE+D + E Sbjct: 1 MTQEGFWDNTEHSQQVTQKLALLKDKVEAFNSLESAYQDLEVMLELCNEEEDPLLDDELK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L + V + E +LSG D NDA L +HAGAGGTESQDW MLLRM+TR+ E Sbjct: 61 SDLASLTKRVADMELEVMLSGPYDRNDAILSLHAGAGGTESQDWVQMLLRMFTRYCENHN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L++ G+EAG+KSAT+ + GPNAYG+LK E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 YKVEVLDLLPGDEAGVKSATIQVSGPNAYGYLKSEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V PVVDD +E+ I D +IDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 DVLPVVDDEVEVNIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+A A +L+AKL +LEL+K+EE + +I WG QIRSYV PY +VKD RT Sbjct: 241 TYNRAAAMKLLKAKLIDLELRKKEEELAALRGDQKDIAWGSQIRSYVFHPYSLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 +E + V+DG +D+F+ A L K+ Sbjct: 301 VEVGNVYAVMDGAIDEFIAAYLKQKR 326 >gi|293449213|ref|ZP_06663634.1| peptide chain release factor 2 [Escherichia coli B088] gi|332280425|ref|ZP_08392838.1| peptide chain release factor RF-2 [Shigella sp. D9] gi|291322303|gb|EFE61732.1| peptide chain release factor 2 [Escherichia coli B088] gi|332102777|gb|EGJ06123.1| peptide chain release factor RF-2 [Shigella sp. D9] Length = 332 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 178/330 (53%), Positives = 226/330 (68%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 +N + E P +W A+ L +ER L+ + + +++ L D LLELA+E DD Sbjct: 2 EEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEE 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E L ++ ++ +F + SGE DS D YL++ AG+GGTE+QDWA+ML RMY R Sbjct: 62 TFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLVR SP+DS RRH Sbjct: 122 WAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QC Sbjct: 182 TSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDS-RI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E + VLDG LD F++A+L Sbjct: 301 KDLRTGVETRNTQAVLDGSLDQFIEASLKA 330 >gi|329928717|ref|ZP_08282566.1| peptide chain release factor 2 [Paenibacillus sp. HGF5] gi|328937498|gb|EGG33916.1| peptide chain release factor 2 [Paenibacillus sp. HGF5] Length = 339 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 168/332 (50%), Positives = 226/332 (68%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + K P W + +A+ L+ E + +++ +++Q D ++++ELA EE D Sbjct: 2 IENFEEKMAAPDFWDDNEKAQALIAEMNSVKSSVDQYQKLQADYDDAVVMIELADEEGDD 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S+ E + ++ + VE + + LL+ D +A LE+H GAGGTESQDW ML RMYT Sbjct: 62 SLAGEIGETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYT 121 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAEKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR Sbjct: 122 RWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF S V P ++D +E++I D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV Sbjct: 182 HTSFVSCDVVPEINDEVELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVT 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQ KN+ +A MLR+KLYE +++++++ +++I WG QIRSYV PY M Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSM 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKD RT +E + V+DGDLD F+ L + Sbjct: 302 VKDHRTQVETGNIGAVMDGDLDGFIDGYLRSQ 333 >gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745] gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745] Length = 330 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 232/325 (71%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N +A+ + +E L NA+ K++ + D ++LE+A++EDD S+ E Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++I+ +E ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK Sbjct: 61 EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E ++ G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ Sbjct: 121 FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY +VKD RT+ Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG+LD F++ L + Sbjct: 301 VETGNVQAVMDGNLDPFVEGFLKKE 325 >gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM 17241] gi|167665826|gb|EDS09956.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM 17241] Length = 374 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 156/359 (43%), Positives = 226/359 (62%), Gaps = 7/359 (1%) Query: 2 KLSRQLNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 +L +L D +D ++L+ L +T P W +V ++ E + Sbjct: 6 ELRLRLEAHRAELDEFAQAIGYDALRRKLAELEEQTTAPGFWNDVERSQKNQLETARVRG 65 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + ++ D L L+ LA EE+D S+ E +++R + ++E ++ +LL+GE D+ Sbjct: 66 KLEACDKLNALYDDTLTLIGLADEENDESVYSEALADVERFESDLETQKLSTLLTGEYDA 125 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N+A + HAGAGGTE+QDWA ML RMYTRWAE+ F + L+ DG+EAG+KSA++LI G Sbjct: 126 NNAIMTFHAGAGGTEAQDWAQMLYRMYTRWAERHGFTYKILDYLDGDEAGLKSASILITG 185 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 NAYG+L+ E GVHRLVR+SP+D++ RRHTSF+S+ V P + D +EI+ D ++D +R Sbjct: 186 DNAYGFLRSEAGVHRLVRVSPFDASGRRHTSFASVEVLPELPDDHSVEINPEDIKMDVFR 245 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SGAGGQH+N T SAVR+THIPTG+VV CQ ERSQ +N+ ML AKL E++ ++ Sbjct: 246 SSGAGGQHINKTSSAVRLTHIPTGIVVSCQNERSQFQNREMCMKMLTAKLVEIKEREHLA 305 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 N + + +I WG QIRSYV PY + KD RT E + + V+DGDLD F+ A L Sbjct: 306 NINEIKGEQMQIAWGSQIRSYVFMPYTLAKDHRTGFESGNINAVMDGDLDGFINAYLKA 364 >gi|254487153|ref|ZP_05100358.1| peptide chain release factor 2 [Roseobacter sp. GAI101] gi|214044022|gb|EEB84660.1| peptide chain release factor 2 [Roseobacter sp. GAI101] Length = 374 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 196/352 (55%), Positives = 250/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++S+ L L + + A RL N + EDP+LW + A+ LMRERQ L ++I+ + Sbjct: 11 QISKSLELLAQRLNVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRERQALVDSIATYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D++ L+E+ E+D ++ E L+ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKQELADHVELIEMGEMENDAEVVAEAEAALKALAETAAQKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWAN+L RMY RWAEK+ +K E GEEAGIKSAT I G NAYGWL Sbjct: 131 NAGAGGTESCDWANILARMYVRWAEKKGYKVELQSESAGEEAGIKSATYKISGLNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M A LA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361 >gi|33592241|ref|NP_879885.1| peptide chain release factor 2 [Bordetella pertussis Tohama I] gi|33601278|ref|NP_888838.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50] gi|81578745|sp|Q7VZ35|RF2_BORPE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|81580061|sp|Q7WK44|RF2_BORBR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|33571886|emb|CAE41402.1| peptide chain release factor 2 [Bordetella pertussis Tohama I] gi|33575713|emb|CAE32791.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50] Length = 367 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 170/349 (48%), Positives = 247/349 (70%), Gaps = 1/349 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + L D+D +RL +N + EDP +W + A+ L RE++ L++ + + E+ Sbjct: 17 AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D+ L+ELAL + D + L+ + R + ++E +F + + AD + ++++ A Sbjct: 77 SGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQA 136 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA+MLLR Y ++AE++ FK E LE +G+ AG+KSAT+ I+G A+G+L+ Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 196 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+ Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 256 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SK Sbjct: 257 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 316 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 T++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 317 TDVGWGHQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 364 >gi|311031920|ref|ZP_07710010.1| peptide chain release factor 2 [Bacillus sp. m3-13] Length = 326 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 172/325 (52%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A++++ E L + E+ + + + EL EE D + E Sbjct: 1 MSNPEFWNNQSSAQVVINEANALKEPVGQFHELSENYENLQLTYELVKEEPDAELQAELG 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + + + + LLSGE D N+A LE+H GAGGTESQDW ++LLRMYTRWAE++ Sbjct: 61 SEVKTVAEDFNKFELQLLLSGEHDKNNAILELHPGAGGTESQDWGSLLLRMYTRWAERKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P DD+IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFDDNIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +L +++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRERAMKMLQAKLYQKKLDEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 TEVGNTQAVMDGDLDPFIDAYLRSK 325 >gi|126462391|ref|YP_001043505.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17029] gi|126104055|gb|ABN76733.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter sphaeroides ATCC 17029] Length = 375 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 203/352 (57%), Positives = 245/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S + I Sbjct: 12 IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E +++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETAGAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362 >gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833] gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833] Length = 378 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 165/354 (46%), Positives = 229/354 (64%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ L + + D D ++++ L + P LW + +A+ + HL ++ I+E Sbjct: 12 ELTGTLRGIQDVLDIDGLRKQIAELEEQAAAPDLWNDPEKAQRVTSRLSHLQGEVNRIEE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + RL D +L ELA EE D L E L ++K ++ + +LLSGE D +A + + Sbjct: 72 LARRLEDLPVLFELAAEEGDQEALAEAERELAKLKSDIGALEVRTLLSGEYDEREALITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +A AGG ++ DWA MLLRMY RWAE++ + TE + EEAGIKS T +K P AYG L Sbjct: 132 NAQAGGVDAADWAQMLLRMYLRWAERKGYPTEIYDTSYAEEAGIKSVTFTVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G HRLVRISP+D+ +RR TSF+ + V PVV+ + +IEI+E + RID YR+SG GGQ Sbjct: 192 KGEHGTHRLVRISPFDNQARRQTSFAGVDVMPVVEQTDDIEINEDEIRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A +L+AKL E + + E A Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMAVLKAKLLERKR-QEEAQAMAELR 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +T WG QIR+YVL PYQ+VKDLRT +E +P+ VLDGDLD F++A + + Sbjct: 311 GETTTSWGTQIRNYVLHPYQIVKDLRTGVESGNPTAVLDGDLDQFIEAEIRWLR 364 >gi|307723715|ref|YP_003903466.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513] gi|307580776|gb|ADN54175.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513] Length = 368 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 165/353 (46%), Positives = 234/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + ++ +G D ++ + + ++ K DP W ++ +++ L ++++ L + Sbjct: 11 NMIEEIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL LEE D SI E + +K ++E + ++LL+G D N+A L + Sbjct: 71 LVSKWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAILSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GGTE+QDWA MLLRMYTRWA + F+ E L+ GEEAGIKS TL+IKGP AYG+L Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+ + V P +++ IE+EI D +IDTYRASGAGGQ Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIRSYV QPY +VKD RTN E + V+DG++D F+ A L K Sbjct: 311 EHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363 >gi|168333703|ref|ZP_02691956.1| peptide chain release factor 2 [Epulopiscium sp. 'N.t. morphotype B'] Length = 349 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 174/345 (50%), Positives = 230/345 (66%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD + ++++ L T + P WQN A+ +++E + IS K++ + D L Sbjct: 4 GDLFDVTHVQEQITELETISATPDFWQNSKYAQSVLQEXKDYKEIISKYKKLCNMYEDVL 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+++ +EE D + E + + + +LL GE D NDA + +HAGAGGTE+ Sbjct: 64 VLIDMGIEEHDADMCAEAISDANSFIEFYDNLRTSTLLDGEYDKNDAIISLHAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW NMLLRMYTRWAEK FK++ L+I DGEEAG+KSATL I G NAYG+LK E+G+HRL Sbjct: 124 CDWNNMLLRMYTRWAEKHGFKSKLLDILDGEEAGVKSATLEISGQNAYGYLKSEKGIHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS RRHTSF+S+ V P +DD+ EI I+ D +IDTYR+SGAGGQHVNTTDSAV Sbjct: 184 VRISPFDSGGRRHTSFASLDVMPKIDDTAEITINPEDLQIDTYRSSGAGGQHVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+G+VVQCQ ERSQ +N+ ML +KL + Q++ + K +I WG Sbjct: 244 RITHKPSGIVVQCQNERSQIQNRETCMKMLASKLLYKQHQEQLLKIDEIRGEKKDIAWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYV PY MVKD RTN E + V+DGD+D F+ A LA K Sbjct: 304 QIRSYVFHPYNMVKDHRTNQETGNTGAVMDGDIDAFVNAYLAWLK 348 >gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica ACS-134-V-Col7a] gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6] gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6] gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica ACS-134-V-Col7a] Length = 330 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 227/325 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N +A+ + +E L N++ K++ + D ++L++A+EE+D S+ E Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNSVEGYKQLVSDIEDASVMLDMAIEEEDTSMEGEIK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + I+ VE ++ LL GE D N+A L HAGAGGTE+QDW +ML+RMY RWAEK Sbjct: 61 QFVNGIQEAVEKQEVLLLLGGEYDQNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKTG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E ++ G+EAGIKSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ Sbjct: 121 FSVELMDEQPGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY MVKD RT+ Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F++ L + Sbjct: 301 VETGNVQAVMDGNIDQFIEGYLKKE 325 >gi|229827336|ref|ZP_04453405.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC 49176] gi|229788274|gb|EEP24388.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC 49176] Length = 340 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 169/333 (50%), Positives = 219/333 (65%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL LN +P W N +A M E L N I E+Q D L+E+A EE+D Sbjct: 2 RLEELNRLISEPGFWDNADKANATMAEISSLKNGIESFDELQTMYDDIGALIEMAEEEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 S++ E D L+R K E + + +LLSG D ++A + +HAGAGGTE+ DW +L+R Y Sbjct: 62 SSMVSEIGDELERFKTEFDTLRISTLLSGPYDKDNAIITLHAGAGGTEACDWTGILMRAY 121 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TRWA+ + FKTE ++ GEEAG+KS T+ I G NAYG+LK E GVHRLVRISP+++ + Sbjct: 122 TRWADSKGFKTEVIDYLAGEEAGVKSCTIEITGTNAYGYLKSEHGVHRLVRISPFNAAGK 181 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R TSF S V P +++ I+IEI + D RIDT+RASGAGGQH+N T SA+RITH P+G+VV Sbjct: 182 RQTSFVSCDVMPDIEEDIDIEIKDEDMRIDTFRASGAGGQHINKTSSAIRITHFPSGIVV 241 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ +NKA+A ML+AKLY L Q+ E + +I WG QIRSYVLQPY Sbjct: 242 SCQNERSQFQNKAKAMQMLKAKLYMLRQQENEAKEAGIRGEQKDIAWGSQIRSYVLQPYT 301 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 MVKD RTN+E + VLDG+ D F+ A L K Sbjct: 302 MVKDHRTNVEIGNAQTVLDGNFDPFINAYLKWK 334 >gi|7688054|emb|CAB89696.1| putative peptide release factor 2 [Xanthomonas campestris pv. campestris] Length = 374 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 179/351 (50%), Positives = 242/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G D+D +RL ++ + E P +W + A+ L RER L+ + I ++ Sbjct: 14 LNDRVLSLRGYLDYDVKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL+LA E D +L + + VE +F+ + SG+ D +A++++ Sbjct: 74 LAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQMDGANAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+ GE AGIKSAT+ I+G AYGWLK Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIRIEGEYAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT VV CQ RSQH+N+ A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNVERDALEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363 >gi|261409628|ref|YP_003245869.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10] gi|261286091|gb|ACX68062.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10] Length = 331 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 223/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ L+ E + +++ +++Q D ++++ELA EE D S+ E Sbjct: 1 MAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQADYDDAVVMIELADEEGDDSLAGEIG 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ + VE + + LL+ D +A LE+H GAGGTESQDW ML RMYTRWAEKR Sbjct: 61 ETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D +EI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV CQ ERSQ Sbjct: 181 DVVPEITDDVEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A MLR+KLYE +++++++ +++I WG QIRSYV PY MVKD RT Sbjct: 241 IKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTQ 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DGDLD F+ L + Sbjct: 301 VETGNVGAVMDGDLDGFIDGYLRSQ 325 >gi|15604144|ref|NP_220659.1| peptide chain release factor 2 [Rickettsia prowazekii str. Madrid E] gi|6225944|sp|Q9ZDQ2|RF2_RICPR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|3860836|emb|CAA14736.1| PEPTIDE CHAIN RELEASE FACTOR 2 (prfB) [Rickettsia prowazekii] Length = 369 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 178/352 (50%), Positives = 246/352 (69%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ + D + RL+ L T DP+LW N A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLDLIWRSLDIEALTVRLTELEELTADPNLWNNNANAQTLLREKNNLEEKLNVFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L + L L +A E+D L + + +++ + + E L SGE D N+ +LE+ Sbjct: 71 LKSNLKEILELEAMAEVENDLETLNQIEQDFKKLSIITAKFETECLFSGETDCNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKT+ + + +GEE GIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTKIINMINGEEVGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S W+YP +DD I I I + D RIDT+R+SGAGGQ Sbjct: 191 KTESGVHRLVRISPFNAAGKRMTSFASSWIYPEIDDDIAITIEDKDLRIDTFRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPT V QCQ +RSQHKNKAQA ML+AKLY+LE+QKR E + + Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRNENVDKQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPYQ+VKDLRTN E + VLDG+L+DF+ A+L++ Sbjct: 311 NKTDNSWGHQIRSYVLQPYQIVKDLRTNYETSDTKGVLDGNLEDFVSASLSM 362 >gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.] Length = 344 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 167/343 (48%), Positives = 239/343 (69%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD DN +RL+ + + W+N +A L++ER + + K + L + IL Sbjct: 1 MFDLDNKEKRLNEIEFLISKDNFWENHDKATPLLKERTFISGKVESFKSLLKDLEECEIL 60 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LA+EE D ++E S +Q++K ++ +L GE D N+A + ++AGAGGTE+QD Sbjct: 61 YSLAIEESDSKTIEEVSVQIQKLKEKINKLSLLLMLDGEDDINNAIVSINAGAGGTEAQD 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W+ +L RMY+RW EK+ FK+ ++ G+EAGIKS T+ ++G AYG+LK E GVHRLVR Sbjct: 121 WSEILFRMYSRWIEKKGFKSTIIDFQPGDEAGIKSVTITVEGDYAYGYLKTEIGVHRLVR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +RHTSF+S++VYP +D+SIEI+I E D RID +R+SGAGGQHVN T SA+RI Sbjct: 181 ISPFNANGKRHTSFASVFVYPELDNSIEIDIDEKDLRIDIFRSSGAGGQHVNKTSSAIRI 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VVQCQQERSQHKNK A ++L+++LY+LE QK+++ K EI WG QI Sbjct: 241 THLPTGIVVQCQQERSQHKNKDMAMSVLKSRLYQLEKQKQDDKMQEIHDGKDEIAWGNQI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RSYVL PYQ++KD R N+E + + VLDG +D F++ L +K Sbjct: 301 RSYVLHPYQLIKDHRINLETGNAAAVLDGAIDPFIEGVLLSRK 343 >gi|331003438|ref|ZP_08326937.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412484|gb|EGG91873.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str. F0167] Length = 337 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + E+ ++RE + L + + +++ D +L+E+ EE+D S++ E Sbjct: 1 MEEPTFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYEENDESLIPEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ E++ + +LL+GE D A ++++AGAGGTES DW +ML RMYTRWA K Sbjct: 61 AMLEEFTKEIDALKIATLLTGEYDDASAIMKLNAGAGGTESCDWCSMLYRMYTRWAAKEG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + + L+I DG+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+++ +R TSF S Sbjct: 121 YTVDVLDILDGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +++ ++++I+ D RIDTYR+SGAGGQH+N T SA+RITHIPTGVVVQCQ ERSQ Sbjct: 181 DIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKL+ L+ Q E + +IGWG QIRSYV+QPY MVKD RT Sbjct: 241 FQNKDKAMQMLKAKLFMLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + S V+DGD+D F+ A L + Sbjct: 301 AESGNVSAVMDGDIDKFIIAYLTWQ 325 >gi|157373979|ref|YP_001472579.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3] gi|157316353|gb|ABV35451.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3] Length = 352 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 173/342 (50%), Positives = 232/342 (67%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL + + E +W N A+ L +ER L+ + I ++ L D Sbjct: 9 GGIFDYDAKKERLEEVCAELESAEVWSNPENAQALGKERSSLEVIVKTIDDMDSGLEDVQ 68 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+ELA+EEDD + S L ++ +E +F + SG D D YL++ +G+GGTE+ Sbjct: 69 DLVELAVEEDDEETFDDASTELDGLEKRLEELEFRRMFSGPHDVADCYLDIQSGSGGTEA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWANM+LRM+ RW + +K E +E+ DG+ AGIK AT+ G A+G L+ E GVHRL Sbjct: 129 QDWANMVLRMFLRWGDAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRL 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+ Sbjct: 189 VRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E SK++IGWG Sbjct: 249 RITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDSKSDIGWGS 308 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 309 QIRSYVLDD-ARIKDLRTGVESRNTQSVLDGDLDKFIEASLK 349 >gi|332284056|ref|YP_004415967.1| peptide chain release factor 2 [Pusillimonas sp. T7-7] gi|330428009|gb|AEC19343.1| peptide chain release factor 2 [Pusillimonas sp. T7-7] Length = 359 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 174/343 (50%), Positives = 244/343 (71%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P +W + A+ L RE++ L+ + + +I + L D Sbjct: 15 FGGIFDYDAKAERLHVVNAELESPDVWNDPKHAQDLGREKKSLETVVHTLADIANGLTDA 74 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L +LA E+DD + L + I +E +F + S AD + ++++ AGAGGTE Sbjct: 75 QELFDLAAEDDDDATLAAVEADTNAIGARLEELEFRRMFSNPADPLNCFMDIQAGAGGTE 134 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA++LLR Y R+ E + FKTE LE DG+ AGIKSAT+ I+G A+G L+ E GVHR Sbjct: 135 AQDWASILLRQYLRYCEHKDFKTEVLEESDGDVAGIKSATIKIEGEYAFGLLRTETGVHR 194 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS + RHTSF+S++VYP VD+S+EI+I+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 195 LVRKSPFDSANGRHTSFASVFVYPEVDESVEIDINPADLRVDTYRASGAGGQHINKTDSA 254 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYELE++ R E SKT++GWG Sbjct: 255 VRITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYELEMRNRMAEQQKMEDSKTDVGWG 314 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 315 HQIRSYVL-DQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLK 356 >gi|114764683|ref|ZP_01443868.1| peptide chain release factor 2 [Pelagibaca bermudensis HTCC2601] gi|114542883|gb|EAU45904.1| peptide chain release factor 2 [Roseovarius sp. HTCC2601] Length = 373 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 192/353 (54%), Positives = 244/353 (69%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ LG DW+ A RL N + EDP+LW + A+ LMR+RQ L +A+ Sbjct: 11 KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQFLVDAMETYTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++ E L+ + + K+ E+LL GEAD ND +LE+ Sbjct: 71 IKQELSDNVELIELGEMEEDDEVVSEAEGALKALAEKAGQKELEALLDGEADGNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTE+ DWA ML RMY RWAEKR ++ E G EAGIKS I G NAYGWL Sbjct: 131 NAGAGGTEACDWAAMLQRMYVRWAEKRGYEVELQSEEAGAEAGIKSVAYKISGTNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+ R TSF+S+WVYPVVDD+IEI+++ SD R+DTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFG-KGTRETSFASVWVYPVVDDNIEIDVNPSDIRVDTYRSSGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 250 HVNTTDSAVRITHMPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAEINAQHE 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA K Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQK 361 >gi|154687644|ref|YP_001422805.1| hypothetical protein RBAM_032440 [Bacillus amyloliquefaciens FZB42] gi|154353495|gb|ABS75574.1| PrfB [Bacillus amyloliquefaciens FZB42] Length = 327 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+ ++ E L ++ ++ + + + +L EE D + QE Sbjct: 1 MAEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKEEPDQDLQQELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R Sbjct: 61 KELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDIFIDAYLRSK 325 >gi|299821880|ref|ZP_07053768.1| peptide chain release factor RF2 [Listeria grayi DSM 20601] gi|299817545|gb|EFI84781.1| peptide chain release factor RF2 [Listeria grayi DSM 20601] Length = 338 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 167/336 (49%), Positives = 228/336 (67%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP W + A+ ++ E L + +++++ + + LEL E Sbjct: 1 MEARIAELEDQMLDPSFWNDQQGAQTVINEANGLKDTYQAFHQLEEQQENLEVSLELLRE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + ++ + LQ E++ + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 ELDADLKEQVEEELQTFVRELKDFELKMILSEPYDKNNAILEIHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+A+K+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+G+HRLVRISP+DS Sbjct: 121 RMYQRFADKKGFKVEMLDYQAGDEAGIKSVTLLIKGLNAYGYLKAEKGIHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P ++D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+TH+PTG Sbjct: 181 SGRRHTSFVSVDVMPELNDDIEIEVRPEDLKIDTYRATGAGGQHINTTDSAVRMTHLPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E+ + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKEQELAAIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT +E + V+DG++DDF+ A L K Sbjct: 301 PYSMVKDHRTEVETGNTQAVMDGEIDDFINAYLRSK 336 >gi|325291337|ref|YP_004267518.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus glycolicus DSM 8271] gi|324966738|gb|ADY57517.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus glycolicus DSM 8271] Length = 371 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 162/351 (46%), Positives = 228/351 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L +L L D ++ L + P W + A+ +M+E + ++ E Sbjct: 11 NLVARLADLRVSLDVPAREVKIGQLEEELNRPDFWDDRSNAQKIMQELTGNKDKVALFGE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D +L ++A+EEDD S+ E ++ RI+ + + + E LLSGE D N+A + + Sbjct: 71 LKTETEDLEVLWQMAMEEDDSSLEDEIVKDIHRIRAQYDELELEILLSGEYDRNNAIITL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+GAGGTE+QDW ML RMY RW E+R++K E L++ GEEAGIKS T + G NA+G+ Sbjct: 131 HSGAGGTEAQDWVQMLYRMYLRWGERRRYKVETLDLLPGEEAGIKSVTFSLAGENAFGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF+S+ V P V++ +EI I D ++DTYR+ GAGGQ Sbjct: 191 KCEKGVHRLVRISPFDSSGRRHTSFASVDVIPEVNEDMEINIDSEDLKVDTYRSGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITHIP+G++VQCQ ERSQ +N+A +L+AKL EL+ +++EE Sbjct: 251 HVNKTDSAVRITHIPSGIIVQCQSERSQIQNRAYCMRILQAKLLELKRKQQEEELLEIRG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +I WG QIRSYV PY MVKD RTN E + + V+DG++D F+ A L Sbjct: 311 ELNDIAWGSQIRSYVFHPYSMVKDHRTNTETGNVNSVMDGEIDLFISAYLK 361 >gi|50086456|ref|YP_047966.1| peptide chain release factor 2 [Acinetobacter sp. ADP1] gi|49532432|emb|CAG70144.1| peptide chain release factor 2 [Acinetobacter sp. ADP1] Length = 337 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 174/334 (52%), Positives = 235/334 (70%), Gaps = 1/334 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +RL + + EDP +W + A+ + +E+ L+N ++ + + ++L D +L+LA+E Sbjct: 2 KKERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVLNVLDNLAEQLEDAKAMLDLAVE 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 DD S+L + L + E+ +F + S D N Y+E+ AG+GGTE+QDWA+MLL Sbjct: 62 ADDESLLVDVESELATAEDELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW E+ FK E +E DG+ AGIKSAT+ ++G AYGWL+ E GVHRLVR SP+DS Sbjct: 122 RMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDS 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +RRHTSFS+++V P +DD+IEIEI+ +D R DTYRASGAGGQH+N TDSAVR+TH PTG Sbjct: 182 GNRRHTSFSAVFVSPEIDDNIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHAPTG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ +RSQH N+ AW LRAKLYELE+ KR E A E SK++IGWG QIRSYVL Sbjct: 242 IVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLD 301 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 302 DS-RIKDLRTGVENSNTGAVLDGDLDKFIEASLK 334 >gi|170017955|ref|YP_001728874.1| peptide chain release factor 2 [Leuconostoc citreum KM20] gi|238688939|sp|B1MW26|RF2_LEUCK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|169804812|gb|ACA83430.1| Peptide chain release factor 2 [Leuconostoc citreum KM20] Length = 372 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 151/353 (42%), Positives = 220/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + G D + + ++ + +P W + +A+ ++ E L N + Sbjct: 13 IQENIARFQGTLDLEALTEEIADFENRMTEPGFWDDNTKAQKVIEENNVLKNRRDSFLNL 72 Query: 63 QDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + +L+++ E+ D E +D++ + + +VE E LL+ D+N+A LEV Sbjct: 73 TNQAEEIEVLIDMLAEDPGDVDTATELADSIAQAQKDVEAYNLEQLLTEPYDANNAILEV 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G+GGTES DW L RMYTRWA++ F+ + L+ H G+EAGI SAT+ I G NA+G+L Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+GVHR VRISP+DS RRHTSF S+ V P +DD+IE+E+ + D ++D +R+ GAGGQ Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN + VR+TH PTG+VV ER+Q+ N+ A +L++KLY+LEL+K+E Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMKLLKSKLYQLELEKQEAERAALTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L + Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYLQWQ 365 >gi|227431353|ref|ZP_03913406.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352946|gb|EEJ43119.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 372 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + G D + + ++ + +P W + +AK ++ E L N + Sbjct: 13 MQENIERFRGTLDMEALTEEIADYENRMTEPDFWNDNEKAKKVIEENNVLKNRRDSFLNL 72 Query: 63 QDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ + +L+E+A+E+ +D L E + + +++ E LL+ D+N+A LE+ Sbjct: 73 TNQVEELELLIEMAVEDPEDEDTLGELEAGVANAQKDIDAYNLEQLLTEPYDANNAILEI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G+GGTES DW L RMYTRWA++ F+ E L+ H G+EAGI SAT+ + G NAYG+L Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+GVHR VRISP+DS RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN + VR+TH PTG+VV ER+Q+ N+ A +L++KLY+LEL+K+E Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L + Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQ 365 >gi|115311854|sp|Q4L4H9|RF2_STAHJ RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 371 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 163/352 (46%), Positives = 227/352 (64%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + L + G D++N + +P W + +A+ ++ + L + ++ E Sbjct: 12 EYRNNLAQIRGSLDFENKETNIQEYEEMMTEPDFWDDQNKAQDVIDKNNALKSVVNGYHE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ + D EL EE D + + N+ K +V+ + + LL G D+N+A LE+ Sbjct: 72 LEEEVEDMTATWELLQEELDGDVKSDLEQNVLDFKEKVDQFELQLLLDGPHDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMY R+ E++ FK E ++ G+EAG+KS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWASMLLRMYQRYGEQQGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGG 240 K E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGG Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPEFNNDEIEIEINPDDITVDTFRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T+SA+RITH PTG+VV Q ERSQ KN+ A ML+AKLY+L+L+++E Sbjct: 252 QHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + EIGWG QIRSYV PY MVKD RTN E V+DG++ F+++ L Sbjct: 312 GEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYLR 363 >gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8] gi|7388057|sp|Q9X1R5|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8] Length = 369 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 164/350 (46%), Positives = 233/350 (66%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + D + L + K DP +W + +A+ ++ + L N +K Sbjct: 14 ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D + +EL+ ++D + Q + +Q ++ V+ + E +L+G+ D N+AYL V Sbjct: 74 VRSLFEDLEVAIELS--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY RWAE++ F E +E GEEAGIK AT+LIKG AYG+L Sbjct: 132 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+S+ V P +DD ++IEI D +I+T+RASG GGQ Sbjct: 192 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQH+NK A +L+AKLY+LE++K+ + Sbjct: 252 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSY+ PY MVKD RT +E + V+DGD+D F++A L Sbjct: 312 ELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 361 >gi|57866389|ref|YP_188014.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A] gi|71153101|sp|Q8CPZ1|RF2_STAES RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|71153102|sp|Q5HQX5|RF2_STAEQ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|57637047|gb|AAW53835.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A] Length = 371 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 160/354 (45%), Positives = 228/354 (64%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + LN + G D +N + DP W + +A+ ++ + L + ++ + Sbjct: 12 EYQNHLNQIRGSLDLENKETNIQEYEEMMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + D EL EE D + E + +Q+ + +++ + + LL G D+N+A LE+ Sbjct: 72 LTNAVDDMSATRELLQEEYDEDMKIELEEEVQQFEEQIDQYELQLLLDGPHDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMY R+ E+ FK E ++ G+EAG+KS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWVSMLLRMYQRYCEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGG 240 K E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGG Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T+SA+RITH PTG+VV Q ERSQ KN+ A ML++KLY+L+L+++E+ Sbjct: 252 QHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IGWG QIRSYV PY M+KD RTN E V+DG++ F++A L + Sbjct: 312 GEQKDIGWGSQIRSYVFHPYSMIKDHRTNEETGKVDAVMDGEIGPFIEAYLRKE 365 >gi|189425791|ref|YP_001952968.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ] gi|189422050|gb|ACD96448.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ] Length = 372 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 170/351 (48%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +++ L D D+ + L L+ + P W + ++ ++++R ++ + + Sbjct: 12 LTSRISSLRRSLDLDSKREELQELDARIAAPGFWDDPSGSQDILKKRTVIEKLLQSWDSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D +++EL E D L E +R+K VE +F+ +LSG D N ++ V+ Sbjct: 72 NRQADDVRVMIELGEESSDEDTLTEVHQMNERLKSGVEEAEFQRMLSGTHDRNGCFVSVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWANMLLRM R+ EK+ +K + DGEEAG+KSAT + G AYG LK Sbjct: 132 SGAGGTESQDWANMLLRMLLRYCEKKGWKAVITDYQDGEEAGLKSATFSVSGEFAYGHLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVR+SP+DSN+RRHTSF+S++V+P + ++ I+I I++SD R+DTYR+SG+GGQ Sbjct: 192 AEAGVHRLVRLSPFDSNNRRHTSFASVFVFPEIEEEDIDIRIADSDLRVDTYRSSGSGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PT +VV CQ ERSQ N+A A +LRAKLYE E+++R A+ Sbjct: 252 HVNTTDSAVRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEMEERNAKASEIAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG LDDF+ L Sbjct: 312 EKREIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDSVLDGALDDFVIPFLM 362 >gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2] gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10] gi|238688848|sp|B1LB88|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2] gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10] Length = 367 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 164/350 (46%), Positives = 233/350 (66%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + D + L + K DP +W + +A+ ++ + L N +K Sbjct: 12 ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D + +EL+ ++D + Q + +Q ++ V+ + E +L+G+ D N+AYL V Sbjct: 72 VRSLFEDLEVAIELS--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY RWAE++ F E +E GEEAGIK AT+LIKG AYG+L Sbjct: 130 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+S+ V P +DD ++IEI D +I+T+RASG GGQ Sbjct: 190 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQH+NK A +L+AKLY+LE++K+ + Sbjct: 250 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSY+ PY MVKD RT +E + V+DGD+D F++A L Sbjct: 310 ELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 359 >gi|84502908|ref|ZP_01001021.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597] gi|84388891|gb|EAQ01761.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597] Length = 374 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 190/352 (53%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L +W+ A RL N + EDP+LW + +A+ LM++RQ L ++I+ I Sbjct: 12 IEKSLELLRQRMNWETAQHRLEEFNARVEDPNLWDDPEKAQALMKDRQALVDSIAVHDSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN L+EL EDD ++ E L+ +K K+ E+LL+GEADSND +LE++ Sbjct: 72 RQELSDNAELIELGEMEDDQEVVAEAETALRALKERAAEKELEALLNGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY RWAEKR +K E G EAGIKS I G NAYGWLK Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEPGAEAGIKSCAYKITGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+ R TSF+S+WVYPVVDD+I+I+++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFG-KGTRETSFASVWVYPVVDDNIDIDVNPADIRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 251 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHEN 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K GWG QIRSYVLQPYQMVKDLRT E + VLDG+LD FM ATLA+ Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTEHETSDTQGVLDGNLDGFMAATLAMD 361 >gi|117921735|ref|YP_870927.1| peptide chain release factor 2 [Shewanella sp. ANA-3] gi|117614067|gb|ABK49521.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. ANA-3] Length = 352 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 173/343 (50%), Positives = 234/343 (68%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL ++ + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDAGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ET+ L ++ + +F + SG+ D++D YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGQHDASDCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349 >gi|218291021|ref|ZP_03495062.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius LAA1] gi|218239039|gb|EED06244.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 164/326 (50%), Positives = 225/326 (69%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E + + + ++ ++ L D + L+LA EEDD + E + Sbjct: 1 MAAPDFWDDPDRAQKIISEMNGVKSVVDTMRRLESLLQDAEVALQLAQEEDDHDLFAEAN 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++K E++ + + +LSGE D N+A LE+H GAGGTESQDWA+MLLRMYTRWAE Sbjct: 61 RLAEQLKSEMDEFELQVMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEDHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L+ GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S+ Sbjct: 121 YKVEVLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASV 180 Query: 210 WVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P + + + IEI + RIDTYR++GAGGQHVNTTDSAVRITHIPTG+VV CQ ERS Sbjct: 181 DVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +N+A+A +L+++L ++RE+ + EI WG QIRSYV PY +VKD RT Sbjct: 241 QIQNRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYSLVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E ++ V+DG++D F+ A L + Sbjct: 301 NYETSNTQAVMDGEIDPFIHAYLRWQ 326 >gi|332297634|ref|YP_004439556.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168] gi|332180737|gb|AEE16425.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168] Length = 378 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 170/352 (48%), Positives = 228/352 (64%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + G D + +S + + W+N +A+ +M + + L N I +++ Sbjct: 12 LKEDILNVWGRLDVPSIEAAISEKEALSGESGFWENPAKAEKVMTDIKQLKNRIEPWRDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L EL +E D S+ E + + E + +LLSGE D N A+L +H Sbjct: 72 IAAVDDAEALYELGMESGDESLEAELKAAYDQAQAEYDRLSILNLLSGEVDRNGAFLTIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY RWAE+R FK E +++ + E GIKS TL I G AYG+LK Sbjct: 132 AGAGGTEACDWAQMLCRMYVRWAERRGFKVETVDMLEAE-GGIKSVTLQISGEYAYGYLK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN+RRHTSFSS++V+PV+DD+IE++I D R+DTYRA GAGGQH Sbjct: 191 SEAGIHRLVRISPFDSNARRHTSFSSVYVFPVLDDTIEVDIRPEDLRVDTYRAGGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVR TH+PTG+VV CQ ERSQ N+A A +MLRA+LYE +++E+ S Sbjct: 251 VNKTDSAVRFTHLPTGIVVACQTERSQTMNRATAMSMLRARLYEYYREQKEKENAKFASE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPY MVKD RT E + V+DG +D F++A LA + Sbjct: 311 KKDISWGNQIRSYVFQPYTMVKDHRTKHEIGNIQSVMDGAIDPFIEAFLAAQ 362 >gi|254294252|ref|YP_003060275.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814] gi|254042783|gb|ACT59578.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814] Length = 370 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 195/352 (55%), Positives = 255/352 (72%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + + L DWD + +RL LN +EDP W + A+ LMRER + A+ I Sbjct: 11 KIQQSIELLRRRLDWDVSSKRLEELNALSEDPDFWNDAENAQKLMRERTKIVTAMDDITA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D + E+A E D S+L++ ++++ + E + +LLSGE D ND ++E+ Sbjct: 71 LETEISDAEEMAEMAEMEGDDSLLEDIVESMKAALIRAERAELSALLSGEVDGNDCFVEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTESQDWANML RMY RWA K E L+ HDGEEAGIKSATL + G NAYGWL Sbjct: 131 NAGAGGTESQDWANMLRRMYVRWANAHGMKVEELDSHDGEEAGIKSATLKVSGENAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN++RHTSFSS+ V PV+DD+IE+EI + D R DTYRASG+GGQ Sbjct: 191 KSESGVHRLVRISPFDSNAKRHTSFSSVAVSPVLDDTIEVEIEDKDVRTDTYRASGSGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSA+R+TH PTG+VV CQ +RSQHKN+A AWNMLRA++YEL++++R E A Sbjct: 251 HINKTDSAIRLTHAPTGIVVACQSDRSQHKNRASAWNMLRARIYELKMRERAEAAQANAD 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+IGWG QIRSYVLQPYQM+KDLRT +E + VLDGDLD F+ A+L+ Sbjct: 311 AKTDIGWGHQIRSYVLQPYQMIKDLRTGVETSDTKGVLDGDLDKFLAASLSA 362 >gi|126739118|ref|ZP_01754812.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6] gi|126719735|gb|EBA16443.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6] Length = 374 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 196/352 (55%), Positives = 252/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L +W+ A RL N + EDP+LW + A+ LMRERQ L +A+ K Sbjct: 11 EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQTLVDAMDTYKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++ + + L+ ++ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKQDLADNIELIELGEMEEDEEVVADAEEALKALQQKAAEKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 251 HVNTTDSAVRITHNPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 310 SAGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|293375591|ref|ZP_06621865.1| peptide chain release factor 2 [Turicibacter sanguinis PC909] gi|325836763|ref|ZP_08166230.1| peptide chain release factor 2 [Turicibacter sp. HGF1] gi|292645808|gb|EFF63844.1| peptide chain release factor 2 [Turicibacter sanguinis PC909] gi|325491141|gb|EGC93430.1| peptide chain release factor 2 [Turicibacter sp. HGF1] Length = 365 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 161/351 (45%), Positives = 220/351 (62%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+S ++N + + + + + + W + +A+ ++ + + ++ Sbjct: 12 KMSERINQFKDSLNVEQKEAEIKEYDDQMQVAGFWDDQRKAQEVINAANAIKDKVNTFYS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + + + EL LEE D + E ++ + + + E LLSG D+N+A LE+ Sbjct: 72 LEGEVEELAVAFELILEEPDADLQAELESQIEEVSEHLNKFELEILLSGPYDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA ML RMYTR+AE++ FK E L+ GEEAGIKS T+ IKG NA+G+ Sbjct: 132 HPGAGGTESQDWAEMLYRMYTRYAERKGFKIEVLDYLVGEEAGIKSVTIKIKGTNAFGYF 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS RRHTSF S V P I+IEI D +IDTYRASGAGGQ Sbjct: 192 KAERGVHRLVRISPFDSGGRRHTSFCSCDVMPEFSGDIDIEIRAEDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+NTTDSAVRITHIPT +V CQ +RSQ KN+ A ML++KLY+ +L+++E Sbjct: 252 HINTTDSAVRITHIPTNTIVTCQNQRSQIKNREAAMEMLKSKLYQRKLEEQEAELAKIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 EIGWG QIRSYV PY +VKD RT+ E + V+DGDLD F+ A L Sbjct: 312 EVKEIGWGSQIRSYVFHPYSLVKDHRTSYEVGNVQSVMDGDLDGFIDAYLR 362 >gi|332978282|gb|EGK15010.1| peptide chain release factor RF2 [Psychrobacter sp. 1501(2011)] Length = 325 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 170/324 (52%), Positives = 225/324 (69%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P LW + A + +E+ LD I+ I ++ L D +LELA+E DD +L + Sbjct: 1 MESPELWNDPERATKISKEKSQLDAIINTITGLETTLEDAAAMLELAVEADDEGLLSDVQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + +VE +F+ + +GE D N+ ++++ +G+GGTE+QDWA MLLRMYTRW E Sbjct: 61 QELNAAQAQVEDLEFKRMFNGEMDPNNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK + E+ G AG+KSA+ + G A+GWL+ E GVHRLVR SP+DSN+ RHTSF+++ Sbjct: 121 FKVDVTEVSAGSVAGVKSASFKVTGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V P +DD I+I+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH PT VVQCQ ERSQ Sbjct: 181 FVSPEIDDDIDIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPTNTVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NKA A MLRAKLYELE+QKR E E +K+++GWG QIRSYVL +KDLRT Sbjct: 241 HGNKATAMKMLRAKLYELEMQKRMEKQQAVEDNKSDVGWGSQIRSYVLDDS-RIKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDGDLD F++A+L Sbjct: 300 VETFNTGAVLDGDLDQFIEASLKA 323 >gi|317497043|ref|ZP_07955371.1| peptide chain release factor 2 [Lachnospiraceae bacterium 5_1_63FAA] gi|316895703|gb|EFV17857.1| peptide chain release factor 2 [Lachnospiraceae bacterium 5_1_63FAA] Length = 333 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 172/325 (52%), Positives = 227/325 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W NV E++ +M+E + L + +++ + D L+++A E++D +++E + Sbjct: 1 MEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKYEDIETLIDMAEEDEDADLIEEAT 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + E + +LL+GE D +DA L +HAGAGGTES DWA ML RM+TRWA K+ Sbjct: 61 ALMDEFEKTYEELRISTLLTGEYDKDDAILTLHAGAGGTESCDWAGMLYRMFTRWAGKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + TE L+ DG+EAGIKS T+ I G NAYG+L+ E+GVHRLVRISP+++ +R TSF+S Sbjct: 121 YGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D IE+EI++ D RIDTYRASGAGGQH+N TDSA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK QA ML+ KLY L+ Q+ E + + GWG QIRSYVLQPY MVKD RTN Sbjct: 241 HKNKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDVGDNGWGNQIRSYVLQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E +PS VLDGDLD FM A LA Sbjct: 301 FESGNPSAVLDGDLDGFMNAYLAWD 325 >gi|77918851|ref|YP_356666.1| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380] gi|77544934|gb|ABA88496.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter carbinolicus DSM 2380] Length = 326 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 175/326 (53%), Positives = 233/326 (71%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W++ +A+ +++ER L+ ++ +E Q L D +L +L E D + L+E S Sbjct: 1 MSRPGFWESGDQAQDILKERTGLEKLVTSFRESQQELEDLQLLADLGAESGDEATLEEIS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ V+ +F +LSGE DS DA ++AGAGGTE+QDWA+MLLRMY R+ EK+ Sbjct: 61 ALLPDLQRRVDKMEFARMLSGEHDSCDAIFSINAGAGGTEAQDWADMLLRMYMRYFEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + G+EAGIK ATL + G AYGWL+ E G+HRLVRISP+DSN+RRHTSF S+ Sbjct: 121 FKAELTDHQPGDEAGIKGATLTVSGDYAYGWLRAEIGIHRLVRISPFDSNARRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V+P + D +E++I+E D ++DTYR+SGAGGQHVN TDSA+RITH+P+G+VV CQ ERSQ Sbjct: 181 FVFPELPDDVEVDINEKDLKVDTYRSSGAGGQHVNKTDSAIRITHVPSGIVVACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKN+A A L+A+LYELEL+K+EE A+ K EIGWG QIRSYVL PY+MVKD RTN Sbjct: 241 HKNRATAMKQLKARLYELELRKKEEEASAIAGEKMEIGWGSQIRSYVLHPYRMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E + VLDGDLD F++A L K Sbjct: 301 FESGNADAVLDGDLDGFIEAYLLSAK 326 >gi|167748494|ref|ZP_02420621.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662] gi|317471975|ref|ZP_07931307.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA] gi|167652486|gb|EDR96615.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662] gi|316900379|gb|EFV22361.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA] Length = 367 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 179/350 (51%), Positives = 236/350 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L L G + +R+ L E P W+++ E++ ++RE + L + + + ++ Sbjct: 15 REPLEKLSGSLGLEEKKERIEQLELDMEAPGFWEDLEESQKVVREVKGLKDQVEGYEGLK 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D L+E+A EE+D + ET + + E + +LLSGE D N+A L +HA Sbjct: 75 GQFEDIETLIEMASEEEDEELAAETQEAFAEFETAYENLRISTLLSGEYDKNNAILSLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA ML RMYTRWA K+ F+T+ ++ DG+EAGIKS T+ IKG NAYG+L+ Sbjct: 135 GAGGTESCDWAGMLYRMYTRWAGKKGFETKVIDYLDGDEAGIKSVTVEIKGENAYGYLRS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++ +R TSF+S V P +D+ + +EI++ D RIDTYRASGAGGQH+ Sbjct: 195 ERGVHRLVRISPFNAAGKRQTSFASCDVMPEIDEDLNVEIADEDIRIDTYRASGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSA+RITHIPTG+VVQCQ ERSQHKNK QA ML+ KLY L+ Q+ E + Sbjct: 255 NKTDSAIRITHIPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKEQQHLEKLSDIRGDV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + GWG QIRSYVLQPY MVKD RTN E +PS VLDGDLD FM A LA Sbjct: 315 GDNGWGSQIRSYVLQPYTMVKDHRTNKESGNPSAVLDGDLDGFMNAYLAW 364 >gi|294677084|ref|YP_003577699.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003] gi|294475904|gb|ADE85292.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003] Length = 375 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 199/351 (56%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + L L D + A RL N E LW + A+ LMRERQ L + + + I Sbjct: 13 RKTLRLLAQRMDLETAPHRLEEFNAMIEHGDLWSDPARAQKLMRERQMLMDKLETYRRID 72 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L DN+ L+EL EDD I+ E +L+ +K K+ E+LL GEAD ND +LE++A Sbjct: 73 RDLTDNIELIELGEMEDDPEIVAEAEKSLRALKELAAAKELEALLDGEADGNDTFLEINA 132 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA+ML RMYTRWAEK+ + E G+EAGI+S I G NAYGWLK Sbjct: 133 GAGGTESCDWASMLARMYTRWAEKKGYTVELQSETAGDEAGIRSVAYKISGQNAYGWLKS 192 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR VRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I SD RIDTYR+SGAGGQHV Sbjct: 193 ESGVHRQVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPASDIRIDTYRSSGAGGQHV 252 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PT +VV +SQH+N+ A N LRA+LY++EL KR N +K Sbjct: 253 NTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALRARLYQMELDKRNAAINAQHEAK 311 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 312 GEAGWGNQIRSYVLQPYQMVKDLRTGHETSDTQGVLDGDLDAFMAATLAMD 362 >gi|119505213|ref|ZP_01627288.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium HTCC2080] gi|119458904|gb|EAW40004.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium HTCC2080] Length = 347 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 175/344 (50%), Positives = 229/344 (66%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 C GG+FD+ RL+ + + +P +W A+ L +ER L+ + I ++ D Sbjct: 2 CSGGIFDYAEKKDRLAEVELELAEPSVWDEPERAQALGKERASLELVVKTIDDLDRGSTD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LLE+A+ EDD + + + ++E +F + SGE D N+AYL+V +G+GGT Sbjct: 62 SHDLLEMAVAEDDIDTADMVASDTSDLIAQLEKLEFRRMFSGEMDPNNAYLDVQSGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW MLLRMY RW E + FK +E GE AG+KSAT+ +G A+GWL+ E GVH Sbjct: 122 EAQDWTEMLLRMYLRWGESKGFKARVVEASAGEVAGLKSATVQFEGEYAFGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+SI+V P +DD+IEI+I+ +D R+DTYR+SGAGGQHVNTTDS Sbjct: 182 RLVRKSPFDSGGRRHTSFASIFVSPEIDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH PT VV CQ ERSQH+NK A LRAKLYELE+ KR E SK +IGW Sbjct: 242 AVRITHEPTNTVVSCQTERSQHQNKDNAMKQLRAKLYELEVLKRSADKQALEDSKADIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDD-ARIKDLRTQVETRNTQAVLDGDLDKFIEASLK 344 >gi|116511800|ref|YP_809016.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris SK11] gi|122940216|sp|Q02ZM8|RF2_LACLS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116107454|gb|ABJ72594.1| bacterial peptide chain release factor 2 (bRF-2) [Lactococcus lactis subsp. cremoris SK11] Length = 365 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 148/350 (42%), Positives = 221/350 (63%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S ++N D D + ++ L P W + A+ ++ E L + + Sbjct: 14 SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + L + +LE+ EE D + E + + ++E + E +L+ D +A LE+H Sbjct: 74 NMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTESQDW +ML+RMYTRW E FK E L+ DG+ AG+KS + G NAYG+L+G Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+TH+PTG+VVQ +R+Q+ N+ +A ML++KLY+LE+ K++ + + Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +EI WG QIRSYV PYQ+VKD RT E S+V+DG++D F+ A L Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLRW 363 >gi|260892371|ref|YP_003238468.1| PE-PGRS family protein [Ammonifex degensii KC4] gi|260864512|gb|ACX51618.1| PE-PGRS family protein [Ammonifex degensii KC4] Length = 377 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 165/352 (46%), Positives = 236/352 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L L D +RL+ L + E P W+++ A+ + +E L + + Sbjct: 12 LAERLKYLEDSLDLAQKEKRLALLEKEMEAPDFWRDLARAQAVTQEVASLRQCLGRFYRL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + +LLELA EE D +L E + +++++ E+E + E LLSG D+++A + +H Sbjct: 72 REGHEELSVLLELAAEEGDAQVLAELAQDVKKLAGEIEDLEVELLLSGPYDASNAIVSLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGT++QDW MLLRMY RWAE ++ L++ GEEAGIKS T + GP AYG+LK Sbjct: 132 AGAGGTDAQDWVAMLLRMYARWAEAHGYRIRTLDLLTGEEAGIKSVTFEVIGPRAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRL+RISP+D++ RRHTSF+S+ V P V D EI+I+ + RIDT+RASGAGGQH Sbjct: 192 AERGVHRLIRISPFDASGRRHTSFASVDVLPAVKDDTEIKIAPEELRIDTFRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T++AVRITH+PTG+ V CQ ERSQ NKA A +LRA+L +L++++RE+ Sbjct: 252 VNKTETAVRITHLPTGITVTCQSERSQSANKAAAMEILRARLLDLKIKEREKELAALRGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIR+YVL PY +VKD RT +E+ VLDGD+DDF++A L ++ Sbjct: 312 VKEIAWGNQIRTYVLHPYTLVKDHRTGVERRDIQAVLDGDIDDFIRAYLKVE 363 >gi|118090032|ref|YP_873927.1| peptide chain release factor 2 [Streptococcus pneumoniae TIGR4] gi|123517990|sp|Q2MGI2|RF2_STRPN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|85720582|gb|ABC75805.1| peptide chain release factor 2, programmed frameshift [Streptococcus pneumoniae TIGR4] Length = 364 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 158/351 (45%), Positives = 217/351 (61%), Gaps = 2/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 +L G D + + ++ L K +P W + I A+ +E L N + +++ Sbjct: 14 REKLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKME 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + + ILL+ E D S+ E L + + + LLS D N+A LE+H Sbjct: 74 ELQDEVEILLDFLAE--DESVHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHP 131 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDW +MLLRMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG LK Sbjct: 132 GSGGTEAQDWGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKS 191 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+V Sbjct: 192 EMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNV 251 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+THIPTG+VVQ +R+Q+ N+ +A ML+AKLY++E K+ + + K Sbjct: 252 NKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEK 311 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIRSYV PY MVKD RT+ E V+DGDLD F+ A L + Sbjct: 312 KEITWGSQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 362 >gi|99080709|ref|YP_612863.1| peptide chain release factor 2 [Ruegeria sp. TM1040] gi|122984362|sp|Q1GIB5|RF2_SILST RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|99036989|gb|ABF63601.1| bacterial peptide chain release factor 2 (bRF-2) [Ruegeria sp. TM1040] Length = 374 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 191/352 (54%), Positives = 244/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L+ L +W+ A RL N + EDP+LW + A+ LMR+RQ L +A+ K I Sbjct: 12 IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAMDTYKSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D++ L+EL E+D ++++ D L+ +K + K+ E+LL GE D NDA+LE+ Sbjct: 72 RQDLQDSVELIELGEMEEDAEVVKDAEDTLKALKEKAAQKELEALLDGETDPNDAFLEIK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+ML RMY RWAE R F E E G EAGIKSAT IKG NAYGWLK Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVELQEEQAGAEAGIKSATYQIKGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+ R TSF+++ YPV+DD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGTHRLVRISPFG-KGTRETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 251 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYV+QPYQMVKDLRTN E VLDGDLD FM ATLA+K Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361 >gi|23099950|ref|NP_693416.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831] gi|22778181|dbj|BAC14451.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831] Length = 327 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 224/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ +++E + ++ + I++ L + + EL EE+D + + Sbjct: 1 MADPSFWDDQNKAQSVIQETNGIKEYVNGFETIEENLENLEVSYELVKEENDQELFADLD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 LQ+ +V + + LLS D+N+A LE+H GAGGTESQDWA+MLLRMY RWAE+R Sbjct: 61 AELQQFITDVNQFELQLLLSEPYDANNAILELHPGAGGTESQDWASMLLRMYQRWAEERN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGLKSVTLIIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D ++I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT ++V CQ ERSQ Sbjct: 181 DVTPEMSDDVDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNIIVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+LE++K+ + + + EIGWG QIRSYV PY MVKD RT+ Sbjct: 241 IKNREAAMKMLKSKLYQLEVEKQRQELDDIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD++ F+ A L + Sbjct: 301 KETGNTQAVMDGDINPFIDAYLRSQ 325 >gi|125624350|ref|YP_001032833.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris MG1363] gi|166223629|sp|A2RLF5|RF2_LACLM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|124493158|emb|CAL98122.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris MG1363] gi|300071134|gb|ADJ60534.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris NZ9000] Length = 365 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 148/350 (42%), Positives = 220/350 (62%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S ++N D D + ++ L P W + A+ ++ E L + + Sbjct: 14 SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L + +LE+ EE D + E + + ++E + E +L+ D +A LE+H Sbjct: 74 TMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTESQDW +ML+RMYTRW E FK E L+ DG+ AG+KS + G NAYG+L+G Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+TH+PTG+VVQ +R+Q+ N+ +A ML++KLY+LE+ K++ + + Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +EI WG QIRSYV PYQ+VKD RT E S+V+DG++D F+ A L Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLRW 363 >gi|116333278|ref|YP_794805.1| protein chain release factor B [Lactobacillus brevis ATCC 367] gi|116098625|gb|ABJ63774.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus brevis ATCC 367] Length = 343 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 159/336 (47%), Positives = 215/336 (63%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + +S + P W + A++L+ E + + + + ++ D ++ LEL E Sbjct: 1 MNESISVNEGQMAQPDFWDDAQAAQLLIDETNEMKKKVDEFQRLVTQVEDLMVALELLQE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + E + + + + LL+ + D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EPDAEMQAEFETDFATAQAALRQYRLNLLLNQKYDHNNALLEIHPGAGGTESQDWGDMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE+ FK L+ G+ AG+ S TL I G NAYG+L+ E+GVHRLVRISP+DS Sbjct: 121 RMYTRWAEQHDFKVTVLDYQPGDVAGLSSVTLAIAGRNAYGYLRSEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DDS++I+I+ ++ ++D YRASGAGGQHVN T SAVRITHIPTG Sbjct: 181 AGRRHTSFASVDVLPELDDSVDIDINPAELKVDVYRASGAGGQHVNKTSSAVRITHIPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +V Q Q +RSQ +N+ A MLRAKLYE +K+ + E + EIGWG QIRSYV Sbjct: 241 IVTQSQAQRSQLQNRQTALAMLRAKLYERAEEKKAQEKAALEGDQMEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLD F+ A L + Sbjct: 301 PYTMVKDHRTNYETGNGQAVMDGDLDPFIDAFLQWQ 336 >gi|288941013|ref|YP_003443253.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180] gi|288896385|gb|ADC62221.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180] Length = 349 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 184/342 (53%), Positives = 240/342 (70%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ RL+ + + EDP +W + A+ L RER L+ + I E+ L D Sbjct: 6 GGIFDYAERKDRLTEVLRELEDPTIWNDPGRAQALGRERATLEAVVLTIDELTGALADAD 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL LA EE D + L+ +L+ + V +F + SGE D+ +A++++ AG+GGTE+ Sbjct: 66 DLLALAAEESDEATLESLVADLKSHEARVSELEFRRMFSGEMDACNAFVDIQAGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RW E+R FKTE +E+ GE AGIKSAT+ +G A+GWL+ E GVHRL Sbjct: 126 QDWAEMLLRMYLRWGERRGFKTELMEVSAGEVAGIKSATVKFEGDYAFGWLRTEIGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSFSS++V P VDDS+EIEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 186 VRKSPFDSGNRRHTSFSSVFVSPEVDDSVEIEINPADLRIDVYRASGAGGQHVNRTESAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQHKNK QA L++KLYELE+QKR E +K++IGWG Sbjct: 246 RITHNPTGIVVQCQNDRSQHKNKDQAMKQLKSKLYELEMQKRRASQQALEETKSDIGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDG+LD F++A+L Sbjct: 306 QIRSYVL-DQSRIKDLRTGVEIANTQGVLDGNLDPFIQASLK 346 >gi|292487146|ref|YP_003530016.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430] gi|291552563|emb|CBA19608.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430] gi|312171251|emb|CBX79510.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC BAA-2158] Length = 332 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 176/330 (53%), Positives = 229/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 +N + E P +W A+ L +ER L+ + + ++ L D LLELA+E +D Sbjct: 2 QEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDED 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E L + ++ +F + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY R Sbjct: 62 TFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE + FKTE +E DGE AG KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRH Sbjct: 122 WAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQC Sbjct: 182 TSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA+ LRAKLYE E+QK+ E +K++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDDS-RI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT++E + VLDGDLD F++A+L Sbjct: 301 KDLRTSVETRNTQAVLDGDLDRFIEASLKA 330 >gi|313903604|ref|ZP_07836994.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter subterraneus DSM 13965] gi|313466157|gb|EFR61681.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter subterraneus DSM 13965] Length = 372 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 215/342 (62%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD + + + +P W + A+ +R+ + L + + + +L D +L Sbjct: 2 IFDLAGKRREIERIEQAMTEPGFWDDPERAQHQVRQLKVLKGPVERYEALDRQLEDLQVL 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ELA EE D S++ E + + +++ + + E LL+G D DA + +H GAGGTESQD Sbjct: 62 AELAAEEADVSVIPELEEGIAQVEEGLRQLELELLLTGPYDGYDAIVSLHPGAGGTESQD 121 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML RMYTRWAE R ++ E L++ +GEEAGIKS T ++GPNAYG+L+ E GVHRLVR Sbjct: 122 WAQMLWRMYTRWAEDRGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLRSEHGVHRLVR 181 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ RRHTSF+S+ V P + DS EIEI D RID +RA G GGQHVN T+SAVRI Sbjct: 182 ISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQHVNKTESAVRI 241 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 H+PTG+V CQ ERSQH N+ A +L+A+L ++R + EI WG QI Sbjct: 242 VHLPTGIVATCQNERSQHSNRETAMKILKARLARYYEEQRLKEIAALRGDVGEIAWGNQI 301 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RSYV QPY +VKD RT +E + V+DG LD F+ A L + Sbjct: 302 RSYVFQPYTLVKDHRTGVEVGNVQAVMDGQLDVFINAYLKWE 343 >gi|285018127|ref|YP_003375838.1| peptide chain release factor 2 protein [Xanthomonas albilineans GPE PC73] gi|283473345|emb|CBA15850.1| probable peptide chain release factor 2 protein [Xanthomonas albilineans] Length = 373 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 179/343 (52%), Positives = 246/343 (71%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG FD+D +RL + + E P +W + A+ L RER +L+ + I + + L ++ Sbjct: 20 YGGFFDYDAKKERLEEVARELESPDVWNDPERAQGLGRERANLEKTVGGIASVLEGLNES 79 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L LLELA E+D Q ++ R + +VE +F+ + SG+ DS +A++++ AGAGGTE Sbjct: 80 LELLELAESENDEDTAQGVIADVDRFQTQVEKLEFQRMFSGQMDSCNAFVDIQAGAGGTE 139 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA +LLRMY RW E R +KTE +E+ GE AGIKSATL ++G AYGWLK E GVHR Sbjct: 140 AQDWAEILLRMYLRWCESRGWKTELMEVSGGEVAGIKSATLRVEGDFAYGWLKTETGVHR 199 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS++RRHTSF+S++V P VDD+I+I+I+ +D + D YR+SGAGGQHVN T+SA Sbjct: 200 LVRKSPFDSDNRRHTSFTSVFVSPEVDDNIDIDINPADLKTDVYRSSGAGGQHVNKTESA 259 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV CQ RSQH+N+ A ML AKLYELE+QKR + E++K++IGWG Sbjct: 260 VRITHVPTGIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAERDAVEATKSDIGWG 319 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 320 SQIRNYVL-DQSRIKDLRTGIERSDTQKVLDGDLDEFVEASLK 361 >gi|238897260|ref|YP_002922937.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465015|gb|ACQ66789.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 348 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D +RL +N + E P +W+ A+ L +ER L + + +++ L Sbjct: 1 MKLSGGIFDYDEKKERLEEINAELEQPDIWKQPEWAQKLGKERAILQEIVETLSQLEKEL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LL+LA+E D E L+ I ++ +F + SG+ D D YL++ +G+G Sbjct: 61 KDVSTLLDLAIEAQDRETFNEAVFELEAIDKKLNRLEFRRMFSGKNDFADCYLDLQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWANMLLRMY RWA+ + FKTE +EI DGE AGIKSATL I G +A+GWL+ E G Sbjct: 121 GTEAQDWANMLLRMYLRWADSKGFKTEIIEISDGEVAGIKSATLKITGDHAFGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+S +VYP ++D+I+I+I+ +D RID YRASGAGGQH+N T Sbjct: 181 VHRLVRKSPFDSGARRHTSFASAFVYPELEDNIDIDINPADLRIDVYRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT +V QCQ +RSQHKNK QA+ L+AKLYE E+QK+ I E +K++I Sbjct: 241 ESAVRITHLPTNIVTQCQSDRSQHKNKEQAFKQLKAKLYEFEMQKKNADKKIMEDNKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSY+L +KDLRT +E + VLDG LD F++A+L Sbjct: 301 GWGSQIRSYILDDS-RIKDLRTGLETRNTQAVLDGYLDKFIEASLKA 346 >gi|237751447|ref|ZP_04581927.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879] gi|229372813|gb|EEO23204.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879] Length = 367 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 175/351 (49%), Positives = 239/351 (68%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + D+ +RL +N W + +A + +E++ + +S E+ Sbjct: 13 LQNKAQNIAKILNPDSLQKRLDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L E+A E D S L+ +N++ ++ ++ + E +LSGE DS +A + + Sbjct: 73 KAELDDARELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSTNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RW+E+R FK E L+ DGEEAGIK A +IKG NAYG+ K Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDYQDGEEAGIKGAAFIIKGENAYGYAK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A ML++KLYELE K+ E + + Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSE--GVANAE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+EIGWG QIRSYVL PYQ VKDLR+N + VLDGD+DD +++ L + Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTDGVLDGDIDDLIESVLVL 361 >gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021] gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021] Length = 372 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 161/354 (45%), Positives = 226/354 (63%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ LN + + D D ++L L + P LW + A+ + + +L ++ ++ Sbjct: 12 ELTGTLNSIQDVLDLDAIRKQLEELGEQAAAPDLWNDQEHAQKVTSKLSYLQGEVNRVES 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + RL D +L ELA EDD +E L +K ++ + +LLSGE D+ +A + + Sbjct: 72 LGQRLEDLTVLYELAAAEDDEETREEADRELASLKSDIGALEVRTLLSGEYDAREAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++ AGG ++ DWA MLLRMY RWAE++ + TE E EEAGIKSAT +K P AYG L Sbjct: 132 NSQAGGVDAADWAQMLLRMYIRWAERKGYPTEVYETSYAEEAGIKSATFTVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GE G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I+E D R+D YR+SG GGQ Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGVDVVPVVETTDHIDINEDDLRVDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L++KL E + Q+ N Sbjct: 252 GVNTTDSAVRLTHLPTGIVVSCQNERSQLQNKATAMAVLQSKLLERKRQEEAAALNEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T WG QIR+YVL PYQ+VKDLRT E +PS VLDGDLD+F+++ + + Sbjct: 312 EATT-SWGTQIRNYVLHPYQIVKDLRTGTEAGNPSSVLDGDLDEFIESEIRWTR 364 >gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078 str. F0262] gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078 str. F0262] Length = 378 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 161/355 (45%), Positives = 225/355 (63%), Gaps = 3/355 (0%) Query: 2 KLSRQ---LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 +LS + L LG D +N +R+ L+ E+P W + A L E HL N + Sbjct: 10 ELSTKAEPLEHLGASLDLENKRKRILELDRMMEEPDFWTDPERANRLSTENHHLKNELES 69 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + ++ D L+E+ +EE D S++ E + L +++ + LLSGE D+ +A Sbjct: 70 YQSLKQSYDDIGALIEMGVEEGDESVIPEIRELLSEFSEKLDSMSTQLLLSGEYDAMNAI 129 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L ++AGAGGTE+ DWA ML RMYTRWAE+R F + L+ +GEEAGIKS T+ I G AY Sbjct: 130 LRLNAGAGGTEANDWAGMLYRMYTRWAERRGFGIKILDYLEGEEAGIKSVTMEIDGDYAY 189 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+L+ E G+HRLVRISP+++ +R TSF S V P ++ I+++I E D +++ +R+SGA Sbjct: 190 GYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDVDIREEDIKMEVFRSSGA 249 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQH+N T SAVR+ HIPTG VV CQ+ERSQ +N+ +A ML+AKLY E +++E Sbjct: 250 GGQHINKTSSAVRLIHIPTGFVVACQEERSQLQNRQKAMQMLKAKLYIKEKEEQEAKLAG 309 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + GWG QIRSYVLQPY+MVKDLRT E + VLDGD+D F+ A L Sbjct: 310 IRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRFITAYLKW 364 >gi|326790220|ref|YP_004308041.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427] gi|326540984|gb|ADZ82843.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427] Length = 369 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 166/350 (47%), Positives = 228/350 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 +L +G D + + S L + D W ++ A+ ++++ ++ + I ++ Sbjct: 15 KAKLVEMGNRLDIEGCKVKASELEEMSMDNAFWNDIERAQSVLQQLKNYKDRIEKYDKLC 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D L+L+E+A E++D + +E + + + +LL E D N+A LE+H Sbjct: 75 GSFEDILVLIEMANEDEDIGLAEEAKACAKTFEEDYSEMLTATLLDQEYDRNNAILELHP 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW ML RMYTRWA+++ FK E L+ DG+EAGIKS T+ I G NAYG+LK Sbjct: 135 GAGGTEACDWVAMLFRMYTRWADRKGFKVEVLDYLDGDEAGIKSVTIQISGENAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+G+HRLVRISP+DS+ RRHTSF+S V P + D IEI+I D RIDTYR++GAGGQHV Sbjct: 195 EKGIHRLVRISPFDSSGRRHTSFASCDVIPEITDEIEIDIRPEDLRIDTYRSTGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PT +VVQCQ ERSQ +N+ +A ML+AKLYE E ++R + + K Sbjct: 255 NTTDSAVRITHLPTNIVVQCQNERSQIQNRERAMQMLKAKLYEKEQEERMDRIDGIRGEK 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +I WG QIRSYV PY MVKD RT+ E + S V+DGD+D FM A L Sbjct: 315 KDIAWGSQIRSYVFHPYNMVKDHRTSEETGNTSAVMDGDIDRFMNAYLGW 364 >gi|312901832|ref|ZP_07761097.1| peptide chain release factor 2 [Enterococcus faecalis TX0470] gi|311291025|gb|EFQ69581.1| peptide chain release factor 2 [Enterococcus faecalis TX0470] Length = 327 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQVQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|212710038|ref|ZP_03318166.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM 30120] gi|212687245|gb|EEB46773.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM 30120] Length = 329 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 177/328 (53%), Positives = 228/328 (69%), Gaps = 1/328 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N + E P +W A+ L +ER L+ + I ++ + D LLELA+E DD Sbjct: 1 MNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLTQGIEDVEGLLELAVEADDEETF 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L ++ ++E +F + SGE DS D Y+++ AG+GGTE+QDWA+ML+RMY RWA Sbjct: 61 NEAGAELDALQGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMYLRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTS Sbjct: 121 ESKGFKTEIIEESDGDVAGLKSATIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ Sbjct: 181 FSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQN 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQHKNK QA L+AKLYELE+QK+ E +K++IGWG QIRSYVL +KD Sbjct: 241 DRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDD-ARIKD 299 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353 LRT +E + VLDGDLD F++A+L Sbjct: 300 LRTGVETRNTQAVLDGDLDKFIEASLKA 327 >gi|295115079|emb|CBL35926.1| bacterial peptide chain release factor 2 (bRF-2) [butyrate-producing bacterium SM4/1] Length = 333 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 153/324 (47%), Positives = 220/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + + LMRE ++L + + ++++ D ++LE+ EE+D S++ E Sbjct: 1 MEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++E + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RWA+K+ Sbjct: 61 GMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F T ++ DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S +R TSF S Sbjct: 121 FTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + + +++E++ + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKEDLDVEVNPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A ML+ KLY ++ ++ E + +I +G QIRSYV+QPY +VKD RT Sbjct: 241 FQNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + VLDGD+D F+ A L Sbjct: 301 AESGNVNAVLDGDIDLFISAYLKW 324 >gi|319957316|ref|YP_004168579.1| bacterial peptide chain release factor 2 (brf-2) [Nitratifractor salsuginis DSM 16511] gi|319419720|gb|ADV46830.1| bacterial peptide chain release factor 2 (bRF-2) [Nitratifractor salsuginis DSM 16511] Length = 372 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 171/352 (48%), Positives = 234/352 (66%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS ++ + + + +RL + ++P W + A + +E+ L+ ++ E Sbjct: 13 LSTKMENITNIVKPEEIRKRLDEIEEMQQNPEFWTDSDRAAKISQEKTRLERTLAKYDEA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D ELA E D L+ D + +K ++ + +LSGE DS +A + +H Sbjct: 73 KAALEDAQEYFELAKSEGDEETLEMLYDEAENLKEHIQQLEVAIMLSGEHDSANAIVTIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RWAE+ FK E L+ GEEAGIK + +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+D+N++RHTSF+S+ V P ++D I+IEI + D RIDTYRASGAGGQH Sbjct: 193 VENGIHRLVRISPFDANAKRHTSFTSVMVSPEINDDIDIEIEDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A ML+++LYE E+ K++ A I Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKAAAMKMLKSRLYEYEMAKKQ--AEIDGIE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++IGWG QIRSYVLQPYQ VKD R+ T+ +LDGD+D ++ L + Sbjct: 311 KSDIGWGHQIRSYVLQPYQQVKDTRSGQAFTNVEAILDGDIDKLLEGVLIAQ 362 >gi|257082363|ref|ZP_05576724.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol] gi|256990393|gb|EEU77695.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol] Length = 327 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N+ A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNIETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|254461473|ref|ZP_05074889.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2083] gi|206678062|gb|EDZ42549.1| peptide chain release factor 2 [Rhodobacteraceae bacterium HTCC2083] Length = 375 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 197/352 (55%), Positives = 246/352 (69%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L DWD A RL N + EDP LW + A+ LM+ERQ L +A+ Sbjct: 11 EIEKSLELLRQRLDWDTAEFRLEEFNARVEDPDLWNDPDAAQKLMQERQALVDAMGTYTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D + ++EL E+D ++ E + L + K+ E+LL GEADSND +LE+ Sbjct: 71 IKQELSDQVEMIELGEMEEDEDVVTEAEEALNALAKLAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEKR +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKRGYKVELQSESAGEEAGIKSAAYKISGQNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 251 HVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMGATLAM 361 >gi|229545626|ref|ZP_04434351.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322] gi|229549816|ref|ZP_04438541.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200] gi|255972544|ref|ZP_05423130.1| peptide chain release factor 2 [Enterococcus faecalis T1] gi|255975657|ref|ZP_05426243.1| peptide chain release factor 2 [Enterococcus faecalis T2] gi|256619256|ref|ZP_05476102.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200] gi|256853316|ref|ZP_05558686.1| peptide chain release factor 2 [Enterococcus faecalis T8] gi|256959169|ref|ZP_05563340.1| peptide chain release factor 2 [Enterococcus faecalis DS5] gi|256964932|ref|ZP_05569103.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704] gi|257084989|ref|ZP_05579350.1| peptide chain release factor 2 [Enterococcus faecalis Fly1] gi|257087047|ref|ZP_05581408.1| peptide chain release factor 2 [Enterococcus faecalis D6] gi|257419489|ref|ZP_05596483.1| peptide chain release factor [Enterococcus faecalis T11] gi|257422371|ref|ZP_05599361.1| peptide chain release factor [Enterococcus faecalis X98] gi|307273028|ref|ZP_07554274.1| peptide chain release factor 2 [Enterococcus faecalis TX0855] gi|307275776|ref|ZP_07556915.1| peptide chain release factor 2 [Enterococcus faecalis TX2134] gi|307277873|ref|ZP_07558957.1| peptide chain release factor 2 [Enterococcus faecalis TX0860] gi|307291799|ref|ZP_07571670.1| peptide chain release factor 2 [Enterococcus faecalis TX0411] gi|312951693|ref|ZP_07770588.1| peptide chain release factor 2 [Enterococcus faecalis TX0102] gi|229305085|gb|EEN71081.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200] gi|229309284|gb|EEN75271.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322] gi|255963562|gb|EET96038.1| peptide chain release factor 2 [Enterococcus faecalis T1] gi|255968529|gb|EET99151.1| peptide chain release factor 2 [Enterococcus faecalis T2] gi|256598783|gb|EEU17959.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200] gi|256711775|gb|EEU26813.1| peptide chain release factor 2 [Enterococcus faecalis T8] gi|256949665|gb|EEU66297.1| peptide chain release factor 2 [Enterococcus faecalis DS5] gi|256955428|gb|EEU72060.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704] gi|256993019|gb|EEU80321.1| peptide chain release factor 2 [Enterococcus faecalis Fly1] gi|256995077|gb|EEU82379.1| peptide chain release factor 2 [Enterococcus faecalis D6] gi|257161317|gb|EEU91277.1| peptide chain release factor [Enterococcus faecalis T11] gi|257164195|gb|EEU94155.1| peptide chain release factor [Enterococcus faecalis X98] gi|306497065|gb|EFM66611.1| peptide chain release factor 2 [Enterococcus faecalis TX0411] gi|306505270|gb|EFM74456.1| peptide chain release factor 2 [Enterococcus faecalis TX0860] gi|306507468|gb|EFM76599.1| peptide chain release factor 2 [Enterococcus faecalis TX2134] gi|306510013|gb|EFM79037.1| peptide chain release factor 2 [Enterococcus faecalis TX0855] gi|310630410|gb|EFQ13693.1| peptide chain release factor 2 [Enterococcus faecalis TX0102] gi|315027919|gb|EFT39851.1| peptide chain release factor 2 [Enterococcus faecalis TX2137] gi|315029504|gb|EFT41436.1| peptide chain release factor 2 [Enterococcus faecalis TX4000] gi|315031977|gb|EFT43909.1| peptide chain release factor 2 [Enterococcus faecalis TX0017] gi|315037173|gb|EFT49105.1| peptide chain release factor 2 [Enterococcus faecalis TX0027] gi|315145002|gb|EFT89018.1| peptide chain release factor 2 [Enterococcus faecalis TX2141] gi|315152286|gb|EFT96302.1| peptide chain release factor 2 [Enterococcus faecalis TX0031] gi|315156087|gb|EFU00104.1| peptide chain release factor 2 [Enterococcus faecalis TX0043] gi|315158272|gb|EFU02289.1| peptide chain release factor 2 [Enterococcus faecalis TX0312] gi|315167276|gb|EFU11293.1| peptide chain release factor 2 [Enterococcus faecalis TX1341] gi|315169439|gb|EFU13456.1| peptide chain release factor 2 [Enterococcus faecalis TX1342] gi|315174820|gb|EFU18837.1| peptide chain release factor 2 [Enterococcus faecalis TX1346] gi|323480920|gb|ADX80359.1| peptide chain release factor 2 [Enterococcus faecalis 62] gi|327535327|gb|AEA94161.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF] Length = 327 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753] gi|156869337|gb|EDO62709.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753] Length = 374 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 158/348 (45%), Positives = 231/348 (66%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L + + + L P W ++ +++ +++ L N +S + + Sbjct: 18 IKDLKEALGLEAMKKEIGELEEAQTSPDFWDDMEKSQKIIQRTSMLKNKVSAYETLVSGY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L L+E+ EE+D SIL + +++++ E+E ++ +LL+GE D+N+A L HAGAG Sbjct: 78 EDALTLIEMGDEEEDLSILPDAQQEVEKVRKELEEQRLATLLTGEYDANNAILTFHAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML RMY RW E+ FK + L+ DGEEAG+KSA +LI+G NAYG+LK E G Sbjct: 138 GTEAQDWAEMLYRMYCRWGERHNFKVKTLDYLDGEEAGLKSAVVLIEGLNAYGYLKSEAG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+D++ RRHTSF+S+ V P +++ +E+EI+ D ++D YRASGAGGQ VN T Sbjct: 198 VHRLVRVSPFDASGRRHTSFASLEVMPEINEDVEVEIAPEDIKMDVYRASGAGGQKVNKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+THIPTG+VV CQ ERSQH+N+ A ML +KL E++ ++ + + + + EI Sbjct: 258 SSAVRLTHIPTGIVVSCQVERSQHQNREVAMKMLASKLMEIKEREHLDKISDIKGVQKEI 317 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 GWG QIRSYV PY + KD RTN E + + V+DGD+D F+ A L + Sbjct: 318 GWGSQIRSYVFMPYTLAKDHRTNYEMGNINAVMDGDIDGFINAYLKQE 365 >gi|259419215|ref|ZP_05743132.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B] gi|259345437|gb|EEW57291.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B] Length = 374 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 190/352 (53%), Positives = 244/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L+ L +W+ A RL N + EDP+LW + A+ LMR+RQ L +AI K I Sbjct: 12 IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAIDTYKGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D++ L+EL E+D ++++ + L+ +K + K+ E+LL GE D NDA+LE+ Sbjct: 72 RQDLDDSVELIELGEMEEDDEVVKDAEETLKALKEKAAQKELEALLDGETDPNDAFLEIK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+ML RMY RWAE R F + E G EAGIKSAT IKG NAYGWLK Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVDLQEEQAGAEAGIKSATYQIKGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+ R TSF+++ YPV+DD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGTHRLVRISPFG-KGTRETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 251 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYV+QPYQMVKDLRTN E VLDGDLD FM ATLA+K Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361 >gi|225867150|ref|YP_002752528.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus 03BB102] gi|225787101|gb|ACO27318.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus 03BB102] Length = 380 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEELHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|225025532|ref|ZP_03714724.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC 23834] gi|224941678|gb|EEG22887.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC 23834] Length = 367 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 167/350 (47%), Positives = 238/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+D RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSGEIRVYLDYDGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKVLEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+++ALEE D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 AGGIDDNRLLIDMALEEGDEDSFAAIEEDVAELEKQMAELEFKRMFNQPADVNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA MLLRMY R+ E++ FK E +E DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLLRMYVRYGERKGFKVEIMEQDDGEIAGINRATIRLEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRHSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQ Q RSQH N+ MLRAKL+ELE++KR E E Sbjct: 256 INKTDSAVRMTHIPTGIVVQSQNSRSQHDNRRVCEEMLRAKLFELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRT+ E + VLDGDLDDF++A+L Sbjct: 316 KSDVGWGSQIRSYVL-DSSRIKDLRTSHETGNTKAVLDGDLDDFIEASLK 364 >gi|257092654|ref|YP_003166295.1| peptide chain release factor 2 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045178|gb|ACV34366.1| peptide chain release factor 2 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 347 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 172/342 (50%), Positives = 239/342 (69%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +L + + EDP +W N A+ L RER+ L+N + + + D L D Sbjct: 4 GGIFDYDQKADQLKTVARELEDPAVWDNAERAQELGRERRSLENVVLTLNRVADSLRDTG 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L +A EEDD L + ++ I+ EV +F + + AD + ++++ AGAGGTE+ Sbjct: 64 ELFAMAREEDDDETLNAVAADIDGIEKEVSGLEFRRMFNNPADPLNCFVDIQAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY R+AE++ + E LE +GE AGIK+A++ I G AYG L+ E G+HRL Sbjct: 124 QDWAAMLLRMYLRYAERKGYAVEVLEESEGEVAGIKTASIKISGEYAYGMLRSETGIHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+RRHTSF S+ YP +DDS E+EI+ ++ RIDTYRASGAGGQH+N TDSAV Sbjct: 184 VRKSPFDSNARRHTSFCSVSAYPEIDDSFEVEINPAELRIDTYRASGAGGQHINKTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT +VVQCQ +RSQH+N+A+A ML++++YE E++KR+ E +K++IGWG Sbjct: 244 RITHLPTNIVVQCQNDRSQHRNRAEAMAMLKSRIYEAEMRKRQTEQQKLEDAKSDIGWGH 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN+E + VLDGDLD F++A+L Sbjct: 304 QIRSYVL-DQSRIKDLRTNVEVGNTQGVLDGDLDQFIEASLK 344 >gi|15672953|ref|NP_267127.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis Il1403] gi|281491474|ref|YP_003353454.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis KF147] gi|24638157|sp|Q9CGX1|RF2_LACLA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|12723911|gb|AAK05069.1|AE006331_9 peptide chain release factor 2 [Lactococcus lactis subsp. lactis Il1403] gi|281375192|gb|ADA64705.1| Peptide chain release factor 2 (RF-2) [Lactococcus lactis subsp. lactis KF147] gi|326406515|gb|ADZ63586.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis CV56] Length = 365 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 148/350 (42%), Positives = 221/350 (63%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + ++N D + + ++ L P W + A+ ++ E L + + Sbjct: 14 AEKINGFRESLDLERLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + L + +LE+ EE D + E + + ++E + E +L+ D +A LE+H Sbjct: 74 NMLEEAQTMLEMLQEEADEEMQAELEEMTIALGQKIESYELEIMLNQPYDHMNAVLEIHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTESQDW +ML+RMYTRW E FK E L+ DG+ AG+KS L G NAYG+L+G Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVALRFVGRNAYGFLRG 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+++ ++D ++DT+R+ GAGGQ+V Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVDVRDADVKMDTFRSGGAGGQNV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+THIPTG+VVQ +R+Q+ N+ +A ML++KLY+LE+ K++ + + Sbjct: 254 NKVSTGVRLTHIPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +EI WG QIRSYV PYQ+VKD RT E S+V+DG+LD F+ A L Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGELDGFINAYLRW 363 >gi|227518951|ref|ZP_03949000.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104] gi|227553571|ref|ZP_03983620.1| peptide chain release factor RF2 [Enterococcus faecalis HH22] gi|256961736|ref|ZP_05565907.1| peptide chain release factor 2 [Enterococcus faecalis Merz96] gi|293383442|ref|ZP_06629355.1| peptide chain release factor 2 [Enterococcus faecalis R712] gi|293388904|ref|ZP_06633389.1| peptide chain release factor 2 [Enterococcus faecalis S613] gi|312907729|ref|ZP_07766720.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512] gi|312910347|ref|ZP_07769194.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516] gi|227073640|gb|EEI11603.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104] gi|227177301|gb|EEI58273.1| peptide chain release factor RF2 [Enterococcus faecalis HH22] gi|256952232|gb|EEU68864.1| peptide chain release factor 2 [Enterococcus faecalis Merz96] gi|291079233|gb|EFE16597.1| peptide chain release factor 2 [Enterococcus faecalis R712] gi|291081685|gb|EFE18648.1| peptide chain release factor 2 [Enterococcus faecalis S613] gi|310626757|gb|EFQ10040.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512] gi|311289620|gb|EFQ68176.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516] gi|315576028|gb|EFU88219.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B] gi|315580603|gb|EFU92794.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A] Length = 327 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + + + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|325981471|ref|YP_004293873.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212] gi|325530990|gb|ADZ25711.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212] Length = 368 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + L D+D+ RL+ L ED +W + + + RE++ L++ + + + Sbjct: 16 LDSRASELRRFLDFDSKQTRLNELTRLLEDSTVWSDSKRTQEIGREKKSLEDTVVTLVSM 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + +L D L ++A +E D + L S + + I+ + +F + SG DSN+ ++++ Sbjct: 76 EKQLGDAKELFQIAKDEADEAALVSISLDAENIEKAIANLEFRRMFSGPMDSNNCFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWA ML RMY R+ E++ F E LE G+ AGIKSATL I G AYG+L+ Sbjct: 136 SGSGGTEAQDWAAMLERMYLRYCERQGFDVEILEESPGDIAGIKSATLKISGEYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D RIDT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRIDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSA+RITH PTG+VVQCQ RSQH+NKA A ML+++L+E EL+KR E E + Sbjct: 256 INKTDSAIRITHNPTGIVVQCQSGRSQHRNKADALTMLKSRLFEAELRKRNEEKQAIEEN 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT+IGWG QIRSYVL +KDLRTN+E + +VLDGDL+ F++A+L Sbjct: 316 KTDIGWGHQIRSYVL-DQSRIKDLRTNVEVGNTQNVLDGDLNSFIEASLK 364 >gi|256762748|ref|ZP_05503328.1| peptide chain release factor 2 [Enterococcus faecalis T3] gi|257079206|ref|ZP_05573567.1| peptide chain release factor 2 [Enterococcus faecalis JH1] gi|294779419|ref|ZP_06744820.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1] gi|307269575|ref|ZP_07550914.1| peptide chain release factor 2 [Enterococcus faecalis TX4248] gi|307289302|ref|ZP_07569258.1| peptide chain release factor 2 [Enterococcus faecalis TX0109] gi|256683999|gb|EEU23694.1| peptide chain release factor 2 [Enterococcus faecalis T3] gi|256987236|gb|EEU74538.1| peptide chain release factor 2 [Enterococcus faecalis JH1] gi|294453548|gb|EFG21949.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1] gi|306500011|gb|EFM69372.1| peptide chain release factor 2 [Enterococcus faecalis TX0109] gi|306514195|gb|EFM82771.1| peptide chain release factor 2 [Enterococcus faecalis TX4248] gi|315147459|gb|EFT91475.1| peptide chain release factor 2 [Enterococcus faecalis TX4244] gi|315163916|gb|EFU07933.1| peptide chain release factor 2 [Enterococcus faecalis TX1302] Length = 327 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1] gi|166225119|sp|A5IM04|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga petrophila RKU-1] Length = 367 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 163/350 (46%), Positives = 234/350 (66%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + + + + + K DP +W + +A+ ++ + L N +K Sbjct: 12 ELEKKYKDILSVVNENEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D + +EL+ ++D + Q + +Q ++ V+ + E +L+G+ D N+AYL V Sbjct: 72 VRSLFEDLEVAIELS--DEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY RWAE++ F E +E GEEAGIK AT+LIKG AYG+L Sbjct: 130 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+S+ V P +DD ++IEI D +I+T+RASG GGQ Sbjct: 190 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQH+NK A +L+AKLY+LE++K++ + Sbjct: 250 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEIQG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV PY MVKD RT +E + V+DGD+D F++A L Sbjct: 310 ELKDISWGNQIRSYVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 359 >gi|328952688|ref|YP_004370022.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM 11109] gi|328453012|gb|AEB08841.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM 11109] Length = 369 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 170/349 (48%), Positives = 243/349 (69%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++ + L G D + RL+ + P WQN ++ +++ER L + ++ +E Sbjct: 15 LSQRYSQLRGRLDLEKKKARLAEIEVLAAKPDFWQNSSQSSQILKERGALTHLLTVWQEQ 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D +LLELA EE D + +L+ + ++ + E LL GE D DA + +H Sbjct: 75 GKKIEDLEVLLELAQEETDEQAFVDVLTDLKVQERALQQLELEMLLGGEDDDKDAIITIH 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA MLLRMY R+AE++ F+TE ++ G+EAG+KS+T + GP+AYG+LK Sbjct: 135 AGAGGTEAQDWAEMLLRMYLRFAERQGFRTEIYDLLPGDEAGVKSSTFAVSGPHAYGYLK 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+D++ RRHTSF++++VYP D+ I+I++ E D RIDT+RASGAGGQH Sbjct: 195 SESGIHRLVRISPFDASGRRHTSFAAVFVYPEADEDIQIDLQEKDLRIDTFRASGAGGQH 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVR+THIPTG+VV Q ERSQH+N+ A +L+++LYELE KR+E A + + Sbjct: 255 VNKTSSAVRLTHIPTGIVVSMQNERSQHRNRELAMRVLKSRLYELEKSKRQEKAQVVLDA 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +I WG QIRSYVLQPY+++KD RT E+ + VLDGDLD F++A L Sbjct: 315 QKDIAWGSQIRSYVLQPYRLIKDHRTKHEEGNVEAVLDGDLDAFIEAYL 363 >gi|291547275|emb|CBL20383.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp. SR1/5] Length = 332 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 159/324 (49%), Positives = 217/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W N ++M M++ + L + I ++ ++ D ++E+ EE+D I+ E Sbjct: 1 MEAPDFWDNAEASQMKMKQLKSLKDDIETYHNLETQMEDMETMIEMGYEENDPEIVPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + ++LLSGE D +A ++++AGAGGTE+ DW ML RMY+RWAEK+ Sbjct: 61 EMLDEFQASFDSIRVKTLLSGEYDGENAIIKLNAGAGGTEACDWCGMLYRMYSRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAG+KS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FALEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKLY L+ Q+ EE + T+IGWG QIRSYVLQPY MVKD RTN Sbjct: 241 HMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVLQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG +D F+ A L Sbjct: 301 EETGNVDAVLDGGIDIFINAYLKW 324 >gi|329114780|ref|ZP_08243537.1| Peptide chain release factor 2 [Acetobacter pomorum DM001] gi|326695911|gb|EGE47595.1| Peptide chain release factor 2 [Acetobacter pomorum DM001] Length = 333 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 194/319 (60%), Positives = 245/319 (76%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ +MRER L N I ++ ++ + D L+ELA E D ++ E L+ + Sbjct: 2 WNDSDAAQKMMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 E + ++ ESLLSGEADSND YLEV+AGAGGTE+QDW MLLRMYTRWAE +K + Sbjct: 62 AEEAKRRETESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E +GE+AG+KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+ Sbjct: 122 ESSEGEQAGLKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DDSIEIEI+++D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A Sbjct: 182 DDSIEIEINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRAT 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A MLRA+LYE ELQKRE A E++KT+IGWG QIRSYVL PYQMVKDLRT +E +P Sbjct: 242 AMQMLRARLYEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNP 301 Query: 336 SDVLDGDLDDFMKATLAIK 354 VLDGDLD FM A LA++ Sbjct: 302 DAVLDGDLDAFMAAALAMR 320 >gi|330719765|gb|EGG98281.1| Peptide chain release factor [gamma proteobacterium IMCC2047] Length = 365 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 179/352 (50%), Positives = 240/352 (68%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + L G D+ RL + + ED +W A+ L +ER L+N ++ I Sbjct: 13 ELQERTDVLRGYLDYAEKKDRLEEVERELEDSAVWDEPERAQALGKERSQLENIVATIDR 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D LL +A+EEDD + E S ++ + ++ +F + SGE D N A+L++ Sbjct: 73 LDSGISDGHELLAMAIEEDDEDTVNEVSAEIETLDAQLAKLEFRRMFSGEMDENSAFLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA MLLRMY RW E++ FK E +E+ G+ AGIK AT+ +G A+GWL Sbjct: 133 QAGSGGTEAQDWAEMLLRMYLRWGEQKGFKVELMEVSAGDVAGIKGATIKFEGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS SRRHTSFS+++V P +DD++EI+I+ +D RIDTYRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGSRRHTSFSAVFVSPEIDDNVEIDINPADLRIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH PT VVVQCQ +RSQH+NK A LRAKLYELE+QKR + A E Sbjct: 253 HVNKTDSAVRITHEPTNVVVQCQSQRSQHQNKDFAMKQLRAKLYELEMQKRNDAAQAQED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K +IGWG QIRSYVL +KDLRTN+E ++ VLDG LD F++A+L Sbjct: 313 NKADIGWGSQIRSYVL-DSSRIKDLRTNVETSNTQAVLDGGLDMFIEASLKA 363 >gi|313884513|ref|ZP_07818274.1| peptide chain release factor 2 [Eremococcus coleocola ACS-139-V-Col8] gi|312620297|gb|EFR31725.1| peptide chain release factor 2 [Eremococcus coleocola ACS-139-V-Col8] Length = 341 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 170/336 (50%), Positives = 223/336 (66%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ + P W + +A+ ++ + + I+++ ++ D + LEL E Sbjct: 1 MEEDIADYEHQMLAPDFWDDNDKAQKVISQLNEAKASYQTIQDLVSQVDDLGMALELYEE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D +L E D + + + + LLSG DS +A LE+H GAGGTESQDW +MLL Sbjct: 61 SQDLDMLSEAEDIMTVTSKALNNYELQLLLSGPHDSANAILEIHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RWA+K+ F+ E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWADKQGFQVEVLDYQAGDEAGIKSVTLEIKGHNAYGYLKSEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N+RRHTSF+SI V P +DDSIEIEI+ D R+DTYRASGAGGQH+N T SAVRITHIPTG Sbjct: 181 NARRHTSFASIEVTPEMDDSIEIEINPDDIRVDTYRASGAGGQHINKTSSAVRITHIPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +V Q Q +RSQ +N+ QA ML+AKLY+ E ++R + + + EIGWG QIRSYV Sbjct: 241 IVTQSQAQRSQFQNRDQAMAMLKAKLYQREEEERAKEMAAIKGQQLEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E + V+DGDLD FM A L + Sbjct: 301 PYSMVKDHRTGYEVGNSQAVIDGDLDGFMDAYLKWQ 336 >gi|257090077|ref|ZP_05584438.1| peptide chain release factor [Enterococcus faecalis CH188] gi|312903512|ref|ZP_07762692.1| peptide chain release factor 2 [Enterococcus faecalis TX0635] gi|256998889|gb|EEU85409.1| peptide chain release factor [Enterococcus faecalis CH188] gi|310633388|gb|EFQ16671.1| peptide chain release factor 2 [Enterococcus faecalis TX0635] gi|315162421|gb|EFU06438.1| peptide chain release factor 2 [Enterococcus faecalis TX0645] gi|315577792|gb|EFU89983.1| peptide chain release factor 2 [Enterococcus faecalis TX0630] Length = 327 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|225851497|ref|YP_002731731.1| peptide chain release factor 2 [Persephonella marina EX-H1] gi|225646418|gb|ACO04604.1| peptide chain release factor 2 [Persephonella marina EX-H1] Length = 370 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 230/353 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + N + + D ++ L L+ + P W + +A+ + +R + N I I+ Sbjct: 11 QLENKFNNIKEILDPESLRGELFKLDQEMGRPDFWNDTKKAQEISSKRNAIANKIQEIES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D +EL E D E ++ + E+ + SLLS E D +A + + Sbjct: 71 VEKKINDIKEFIELLELEYDKETEDEIKREIEALDKEITKLETASLLSEEYDMKNAIVTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GG E+ DW MLLRMY RWAEK F E ++ + AGIKSAT ++KGP AYG+L Sbjct: 131 QAGSGGVEACDWTEMLLRMYLRWAEKNGFDVEMVDYQPDDVAGIKSATFIVKGPYAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N RRHTSFS++ V P + D +++EI E D RIDT+RASGAGGQ Sbjct: 191 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIGDEVKVEIKEEDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRI HIPTG+ V CQ ERSQ +N+A+A ML+AKLY+ EL+K++E E Sbjct: 251 HVNTTDSAVRIVHIPTGITVSCQSERSQIQNRAKALQMLKAKLYQYELEKQKEKQKELEG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPYQMVKDLRT E + V+DGD+D F+++ L + Sbjct: 311 EKKDISWGSQIRSYVFQPYQMVKDLRTGYETGNIQAVMDGDIDPFIESYLKWR 363 >gi|229586524|ref|YP_002845025.1| peptide chain release factor 2 [Rickettsia africae ESF-5] gi|259585246|sp|C3PMX2|RF2_RICAE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|228021574|gb|ACP53282.1| Peptide chain release factor RF-2 [Rickettsia africae ESF-5] Length = 368 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 188/352 (53%), Positives = 249/352 (70%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D + + +RL+ L T DP LW + A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L L E+A E+D L + +L+ + + + E L SGEAD N+ +LE+ Sbjct: 71 LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPY MVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 311 TKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 362 >gi|302875854|ref|YP_003844487.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] gi|302578711|gb|ADL52723.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] Length = 369 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 161/350 (46%), Positives = 228/350 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS+ + +G L D L L ++ W N+ A+ + + + + I Sbjct: 13 ELSKTIEEMGALLDIPKLTLTLEELEGSMQESGFWDNLERAQSVTARAKGIKDRIDLYNN 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 Q + D +L+E+A+EE+D S++ E + + + VE + E +LSGE D+N+A + + Sbjct: 73 FQSSVEDIKVLIEMAIEENDSSLVTEVYNEISTLSDSVENLRLELMLSGEYDTNNAIVTL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+G GGT++ DW MLLRMYTRW EK+ F E L++ G+EAGIKSATL + G AYG+L Sbjct: 133 HSGVGGTDAMDWTEMLLRMYTRWCEKKAFNVETLDLQVGDEAGIKSATLKVTGLYAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +EI+ SD ++DTYRASGAGGQ Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASLEVTPELRQDQNVEINPSDLKVDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHIPTG+VVQCQ ERSQ +N+ A NML++KL EL+ + +E Sbjct: 253 HVNKTESAIRITHIPTGIVVQCQNERSQIQNRETALNMLKSKLVELKERAHKEKIEDLTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYV PY MVKD RTNI+ V+DG+LD F+K L Sbjct: 313 DLKDMGWGSQIRSYVFHPYTMVKDHRTNIQVNDVYKVMDGELDVFIKGYL 362 >gi|222152785|ref|YP_002561962.1| peptide chain release factor 2 [Streptococcus uberis 0140J] gi|254790921|sp|B9DRN6|RF2_STRU0 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|222113598|emb|CAR41450.1| peptide chain release factor 2 [Streptococcus uberis 0140J] Length = 366 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 156/354 (44%), Positives = 222/354 (62%), Gaps = 2/354 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++ +L D D + ++ L K +P W + I A+ +E L + Sbjct: 11 VENKEKLTSFRRSLDLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKSTFETFH 70 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ + + + LE+ E D SI +E + L +++ + + LLS D N+A LE Sbjct: 71 DMLELSDETELYLEMLAE--DESIKEELEEALVKLEQILSQYEMTLLLSEPYDHNNAILE 128 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H G+GGTE+QDWA+ML RMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG+ Sbjct: 129 IHPGSGGTEAQDWADMLFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGF 188 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGG Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGG 248 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN + VR+THIPTG+VV +R+Q+ N+ +A ML+AKLY+LE +K+ E N + Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALK 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYV PY MVKD RTN E V+DG++D F+ A L + Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFEVAQVDKVMDGEIDGFIDAYLKWR 362 >gi|184154810|ref|YP_001843150.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956] gi|183226154|dbj|BAG26670.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956] Length = 355 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 168/347 (48%), Positives = 219/347 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ GGLFD D + ++ + P W + A+ + L +QD++ Sbjct: 1 MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + + E+ E D + E DN ++ + + E LL G D +DA LE+H GAG Sbjct: 61 EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWA + F E GEEAGIKS TLLIKG NAYG+L E+G Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI SD R+DT+RASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E + EI Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQKEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYV PY +VKD RT E V+DGDLD F+ A L Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVVGVMDGDLDPFINAYLQW 347 >gi|15892291|ref|NP_360005.1| peptide chain release factor 2 [Rickettsia conorii str. Malish 7] gi|24638155|sp|Q92IQ2|RF2_RICCN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|15619432|gb|AAL02906.1| peptide chain release factor RF-2 [Rickettsia conorii str. Malish 7] Length = 368 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 188/352 (53%), Positives = 249/352 (70%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D + + +RL+ L T DP LW + A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L L E+A E+D L + +L+ + + + E L SGEAD N+ +LE+ Sbjct: 71 LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPY MVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 311 AKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSAHLAM 362 >gi|309803856|ref|ZP_07697941.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d] gi|325913296|ref|ZP_08175664.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B] gi|329920534|ref|ZP_08277266.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G] gi|308164090|gb|EFO66352.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d] gi|325477399|gb|EGC80543.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B] gi|328936210|gb|EGG32663.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G] Length = 359 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 220/351 (62%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LGGLFD+DN + ++ K D W + A+ ++ ++ + + + Sbjct: 1 MKNNYHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +EL E + +L E + ++++K E + LLSG+ D ++A LE+H Sbjct: 61 SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G LK Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAGGQH Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + + + Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351 >gi|89100645|ref|ZP_01173503.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911] gi|89084669|gb|EAR63812.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911] Length = 328 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P+ W + A++++ E L + + ++ + + + EL EE D + E + Sbjct: 1 MLHPNFWDDQKAAQVVISESNALKDQVHEFHDLYETFENLELTYELVKEESDEDLQNELA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ Sbjct: 61 EELTELTKRLAQFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++E+ + EIGWG QIRSYV PY MVKD RT+ Sbjct: 241 IKNRERAMKMLQAKLYQKKIEEQEQELLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 TESGNVQGVMDGDLDPFINAYLRSR 325 >gi|78485070|ref|YP_390995.1| peptide chain release factor 2 [Thiomicrospira crunogena XCL-2] gi|78363356|gb|ABB41321.1| bacterial peptide chain release factor 2 (bRF-2) [Thiomicrospira crunogena XCL-2] Length = 332 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 170/329 (51%), Positives = 231/329 (70%), Gaps = 1/329 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 + + EDP +W + A+ L +E+ LDN ++ I++++ L +LE+A + D + Sbjct: 3 EVERELEDPTVWNDPERAQALGKEKSQLDNVVTTIQDLESSLESAHEILEMAEMDADQEM 62 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 + E L R++ ++E +F+ + SGE D+N+ YLE+ AG+GGTE+QDWANM+LRMY RW Sbjct: 63 VDEVVSELARLEEKLEQLEFQRMFSGELDANNCYLEIQAGSGGTEAQDWANMILRMYLRW 122 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AE FK E LEI G+ AGIK AT+ ++G A+GWL+ E GVHRLVR SP+DS +RRHT Sbjct: 123 AESHGFKAEILEISAGDVAGIKGATVHVQGDYAFGWLRTETGVHRLVRKSPFDSGNRRHT 182 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S+++ P +DDS E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT V QCQ Sbjct: 183 SFASVFISPEIDDSFEVEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNTVTQCQ 242 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 RSQH+NKA+A LRAKLYELE+ R E +K++IGWG QIRSYVL +K Sbjct: 243 NGRSQHQNKAEAMKQLRAKLYELEMLSRNAEKQEMEENKSDIGWGSQIRSYVL-DSGRIK 301 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 DLRTN+E + + VLDGDLD F+ +L Sbjct: 302 DLRTNVETGNTNGVLDGDLDQFIIPSLKA 330 >gi|332798808|ref|YP_004460307.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1] gi|332696543|gb|AEE91000.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1] Length = 365 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 161/346 (46%), Positives = 227/346 (65%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L + D ++ L KT W + A+ ++ L ++ + Sbjct: 16 LTELRDSLEIDKIKFEINQLEQKTFAADFWNDQELAQKTLQRLNDLKEKFDNFTLLEKKY 75 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L L+EL E DD + E + ++ K ++E + ++LLSG+ D +A L +HAGAG Sbjct: 76 DDLLTLIELCTETDDEELRTELLNEMKDFKKQLEKMKLQTLLSGKYDGRNAILTLHAGAG 135 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW +MLLRMYTRWAE + +K L++ G+EAGIKSA +L++GPNAYG+LK E+G Sbjct: 136 GTEAQDWVSMLLRMYTRWAEDKGYKVSILDMLPGDEAGIKSAAVLVEGPNAYGYLKSEKG 195 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+D+ RRHTSF+S+ V P +DD IEI+I D +IDT+R+ GAGGQHVN T Sbjct: 196 VHRLVRISPFDAAGRRHTSFASVDVMPEIDDDIEIDIKPEDLKIDTFRSGGAGGQHVNKT 255 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITHIPTG VV CQ ERSQ N+ A +LRAKL+++ +++++ + S+ EI Sbjct: 256 ESAVRITHIPTGTVVSCQNERSQQSNRNTAMKILRAKLFDIYQEEQQKELDKIRGSQKEI 315 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSY+ PY +VKD RT++E + V+DG+LD+F+ A L Sbjct: 316 AWGSQIRSYIFHPYSLVKDHRTDVEVGNVQAVMDGELDEFINAYLK 361 >gi|67459393|ref|YP_247017.1| peptide chain release factor 2 [Rickettsia felis URRWXCal2] gi|75536187|sp|Q4UKS1|RF2_RICFE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|67004926|gb|AAY61852.1| Peptide chain release factor RF-2 [Rickettsia felis URRWXCal2] Length = 368 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 188/352 (53%), Positives = 250/352 (71%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D +++ +RL+ L T DP LW + A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLELLWRSLDVESSTERLNELEELTSDPSLWNDQANAQTLLREKSNLEEKLNAFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L L E+A E+D L + +L+ + + + E L SGEAD N+ +LE+ Sbjct: 71 LKSNLKDTLELEEMAEAENDLETLSQIEQDLKNLSVIAAKFETECLFSGEADGNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DW ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWVSIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPT V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPYQMVKDLRT+ E + VLDGDL+DF+ A+LA+ Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEDFVSASLAM 362 >gi|269469023|gb|EEZ80587.1| protein chain release factor B [uncultured SUP05 cluster bacterium] Length = 364 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 176/351 (50%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ + L D + RL + + E+P +W N EA+ L +E+ L+ Sbjct: 13 LTQRSSALSAHLDLEEKQGRLEEVLLEMENPDIWSNPDEAQALGQEKSKLELICQTFARA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLE+A E+D + +L ++L +E +FE + SGE D+N AYL++ Sbjct: 73 NSILEDAKELLEMAQSENDKDTVNSVIGDLNTVELSIEKLEFERMFSGELDANSAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWA M+LRMY RW EK KFK + +E+ GE AGIKSAT+ G A+GWL+ Sbjct: 133 SGSGGTEAQDWAEMILRMYLRWGEKHKFKVKLMEVSAGEVAGIKSATIHFNGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+++N +RHTSFSS++V P +DD+IEI I+ SD RIDTYRASGAGGQH Sbjct: 193 SEIGIHRLVRKSPFNANGKRHTSFSSVFVSPEIDDNIEININPSDLRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT VVQCQ RSQH NK QA L++KLYELE+Q+R + E + Sbjct: 253 VNKTESAVRITHLPTNTVVQCQDGRSQHANKDQAMKQLKSKLYELEMQERNKEKQDLEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E T+ DVLDG+LD F++A+L Sbjct: 313 KSDIGWGHQIRSYVL-DQSRIKDLRTGVESTNTQDVLDGNLDKFIEASLKA 362 >gi|315149827|gb|EFT93843.1| peptide chain release factor 2 [Enterococcus faecalis TX0012] Length = 327 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EI WG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEISWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|227514375|ref|ZP_03944424.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC 14931] gi|227087241|gb|EEI22553.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC 14931] Length = 355 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 168/347 (48%), Positives = 219/347 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ GGLFD D + ++ + P W + A+ + L +QD++ Sbjct: 1 MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + + E+ E D + E DN ++ + + E LL G D +DA LE+H GAG Sbjct: 61 EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWA + F E GEEAGIKS TLLIKG NAYG+L E+G Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI SD R+DT+RASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E + EI Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYV PY +VKD RT E V+DGDLD F+ A L Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYLQW 347 >gi|253752128|ref|YP_003025269.1| peptide chain release factor 2 [Streptococcus suis SC84] gi|253753953|ref|YP_003027094.1| peptide chain release factor 2 [Streptococcus suis P1/7] gi|253755172|ref|YP_003028312.1| peptide chain release factor 2 [Streptococcus suis BM407] gi|251816417|emb|CAZ52048.1| peptide chain release factor 2 [Streptococcus suis SC84] gi|251817636|emb|CAZ55384.1| peptide chain release factor 2 [Streptococcus suis BM407] gi|251820199|emb|CAR46580.1| peptide chain release factor 2 [Streptococcus suis P1/7] Length = 364 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 215/353 (60%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L G D + + ++ L K +P W + + A+ +E L N + Sbjct: 12 ELGKKLTSFRGSLDLEGLEEEIAILENKMTEPDFWNDNLAAQKTSQELNELKNTYGNFHQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D ++ ILL+ E D S+ E + L + + + LLS D N+A LE+ Sbjct: 72 MLDLYDESEILLDFLAE--DESVRDELVEKLVELDKTMTAYEMTLLLSEPYDHNNAILEI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G+GGTE+QDW MLLRMY R+ + F E L+ G+EAGIKS TL GPNAYG L Sbjct: 130 HPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKSVTLSFTGPNAYGLL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IEIEI + + ++DT+R+ GAGGQ Sbjct: 190 KSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN + VR+THIPTG+V Q +R+Q+ N+ +A +L+AKLY+LE +K+ + + Sbjct: 250 NVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYV PY MVKD RT E V+DGDLD F+ A L + Sbjct: 310 DKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWR 362 >gi|157803496|ref|YP_001492045.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel] gi|157784759|gb|ABV73260.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel] Length = 350 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 187/344 (54%), Positives = 248/344 (72%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + GLFD A +RL L T +P LW + + A+ L+RE+ L+ ++ + +++ L D Sbjct: 1 MRGLFDIKTATKRLKELAELTTNPDLWNDQVNAQTLLREKSTLEEKLNTLNKLKSNLKDT 60 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L L LA E+D L + +L+ + + + E L SGEAD N+ +LE++AGAGGTE Sbjct: 61 LELEALAETENDLETLAQVKQDLKNLSIIAAKFETEYLFSGEADCNNCFLEINAGAGGTE 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHR Sbjct: 121 SHDWASIMMRMYLRFAERLDFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHR 180 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSA Sbjct: 181 LVRISPFNAAGKRMTSFASSWVYPEIDDNISITIDDKDLRIDTFRASGAGGQHVNTTDSA 240 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG Sbjct: 241 VRITHIPTGTVTQCQSDRSQHKNKAQAMRMLKAKLYELEMQKRTDNINEQNAAKTDNSWG 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSY+LQPYQMVKDLRT+ E + VLDG+L++F+ A+LA+ Sbjct: 301 HQIRSYILQPYQMVKDLRTDYETSDTRGVLDGNLEEFVSASLAM 344 >gi|224499863|ref|ZP_03668212.1| peptide chain release factor 2 [Listeria monocytogenes Finland 1988] gi|284802947|ref|YP_003414812.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578] gi|284996088|ref|YP_003417856.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923] gi|284058509|gb|ADB69450.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578] gi|284061555|gb|ADB72494.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923] Length = 338 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 170/336 (50%), Positives = 221/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336 >gi|269836751|ref|YP_003318979.1| hypothetical protein Sthe_0720 [Sphaerobacter thermophilus DSM 20745] gi|269786014|gb|ACZ38157.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM 20745] Length = 369 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 159/349 (45%), Positives = 224/349 (64%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +L+ +G D + + L ++ DP W + A+ +MR L N + E+ Sbjct: 13 MLERLDRIGVRLDLPAKQREIEELEARSADPEFWNDGAGAQRVMRRLGALRNQVETWTEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L++LA +DD + E + +R+ VE + LLSG+ D +DA + +H Sbjct: 73 HQQAADLRELIDLAEADDD--LRDEIAAETERVLRGVEQLELNLLLSGQYDEHDAIMAIH 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GG ++QDWA ML+RMY RWA R F+ + L++ +GEEAGIKSAT+ I+GP AYG+ K Sbjct: 131 AGTGGVDAQDWAEMLMRMYLRWASNRGFQAQVLDVTEGEEAGIKSATIEIRGPYAYGYTK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE G HRLVR+SP+D RRHT+F+ + V P V++ EI I + + RIDTYR+SGAGGQH Sbjct: 191 GEAGTHRLVRLSPFDQAHRRHTAFALVEVLPQVEEDTEIVIRDDEIRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH+PTG+VV CQ ERSQ +N+ A +LRA+L EL ++KREE + Sbjct: 251 VNKTDSAVRITHLPTGIVVTCQNERSQIQNRETAMKILRARLTELAIRKREEEQAKLKGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +GWG +IRSYVLQPY MV D RT ++ V +G++D F++A L Sbjct: 311 HVAVGWGNRIRSYVLQPYTMVTDHRTEYSTSNVQAVFEGEIDPFIEAYL 359 >gi|167462917|ref|ZP_02328006.1| peptide chain release factor 2 in translation [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383023|ref|ZP_08056853.1| peptide chain release factor 2-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153046|gb|EFX45506.1| peptide chain release factor 2-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 332 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 223/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ + E + ++ + + D ++ +LA EEDD S+ E + Sbjct: 1 MAAPDFWDDQEKAQKTIAELNAIKGSVEQFQALSSEFGDIEVMAQLAEEEDDESLAAEVA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++++ I ++E + + LLS D +A LE+H GAGGTESQDWA MLLRMY RWAEK Sbjct: 61 ESIKGIVGKLEGFELQLLLSQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWAEKHD 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVEVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD +++EI D +IDTYRASGAGGQH+NTTDSAVRITHIPTG+VV CQ ERSQ Sbjct: 181 DVVPEIDDDVDVEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A +LR+KLYE +++++E+ +++I WG QIRSYV PY MVKD RT+ Sbjct: 241 IKNRERAMKLLRSKLYEKKIEEQEKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 AETGNAGAVMDGDLDMFIDAYLRQQ 325 >gi|309809397|ref|ZP_07703259.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D] gi|312870788|ref|ZP_07730894.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a] gi|312873174|ref|ZP_07733233.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1] gi|315653886|ref|ZP_07906802.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195] gi|308170308|gb|EFO72339.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D] gi|311091407|gb|EFQ49792.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1] gi|311093664|gb|EFQ52002.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a] gi|315488582|gb|EFU78228.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195] Length = 359 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 220/351 (62%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LGGLFD+DN + ++ K D W + A+ ++ ++ + + + Sbjct: 1 MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +EL E + +L E + ++++K E + LLSG+ D ++A LE+H Sbjct: 61 SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNDYELHLLLSGKYDDHNALLEIH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G LK Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAGGQH Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + + + Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351 >gi|259501054|ref|ZP_05743956.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335] gi|309807259|ref|ZP_07701230.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b] gi|309808840|ref|ZP_07702723.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a] gi|312874339|ref|ZP_07734370.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d] gi|312875084|ref|ZP_07735101.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b] gi|325911468|ref|ZP_08173880.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D] gi|259167748|gb|EEW52243.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335] gi|308166350|gb|EFO68558.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b] gi|308167916|gb|EFO70051.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a] gi|311089374|gb|EFQ47801.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b] gi|311090105|gb|EFQ48518.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d] gi|325476818|gb|EGC79972.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D] Length = 359 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 220/351 (62%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LGGLFD+DN + ++ K D W + A+ ++ ++ + + + Sbjct: 1 MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +EL E + +L E + ++++K E + LLSG+ D ++A LE+H Sbjct: 61 SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G LK Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAGGQH Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + + + Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351 >gi|149183327|ref|ZP_01861766.1| peptide chain release factor 2 [Bacillus sp. SG-1] gi|148848954|gb|EDL63165.1| peptide chain release factor 2 [Bacillus sp. SG-1] Length = 327 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E L ++ K++Q+ + + LEL EE+D + +E Sbjct: 1 MLQPDFWNDQQQAQGVINEANGLKELVNEYKDMQEMQENLEVTLELVKEENDAELQEELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMY RWAEK+ Sbjct: 61 EETKDLNKRLNEYELQLLLSEPHDKNNAILELHPGAGGTESQDWGSMLLRMYQRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH PTGVVV CQ ERSQ Sbjct: 181 EVMPEFNEEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHQPTGVVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+ ++++E+ + +IGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNREQAMKMLKAKLYQKRIEEQEQELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD++ F+ A L + Sbjct: 301 TEMGNVQAVMDGDINGFINAYLRSR 325 >gi|309791264|ref|ZP_07685795.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6] gi|308226690|gb|EFO80387.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6] Length = 361 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 142/343 (41%), Positives = 215/343 (62%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD +++S L + +P LW + A+ +M++ L + ++ ++ +L Sbjct: 15 GGIFDLATKQEQISSLEERAAEPDLWNDPRTAQGVMQQLTRLKDEVAQWTNLESQLISLD 74 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L++L E D ++ E + ++ + E+ ++ LLSG D DA++ + AG GGT++ Sbjct: 75 ELIDLTEAEGDATLYTEIAAEVRAAQKELAQRELALLLSGPYDDRDAFVSIQAGMGGTDA 134 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+M+LRMY RWAE R + +++ G+EAGIKSATL ++GP AYG ++ E GVHRL Sbjct: 135 QDWADMMLRMYLRWAETRGYSVTIVDMSAGDEAGIKSATLELRGPYAYGNIRAEAGVHRL 194 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 +R+SP+++ R TSF+ + V P VDD+ E+ I D RID +R+ G GGQ VNTTDSAV Sbjct: 195 IRLSPFNAAHTRQTSFARVEVVPEVDDAPEVTIKPEDLRIDVFRSGGHGGQGVNTTDSAV 254 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PTG+VV CQ ERSQ +N+ A +LR +L E ELQ++ E + +G Sbjct: 255 RLTHLPTGIVVTCQNERSQLQNRETAMRVLRGRLLERELQRQLEERARLRGEHRDAAFGS 314 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 Q+R+Y L P +VKD RT E ++ VLDG LD F++A L Sbjct: 315 QMRTYYLHPSTLVKDHRTEHETSNVYAVLDGQLDPFIEAYLRW 357 >gi|315649817|ref|ZP_07902900.1| peptide chain release factor 2 [Paenibacillus vortex V453] gi|315274791|gb|EFU38172.1| peptide chain release factor 2 [Paenibacillus vortex V453] Length = 339 Score = 368 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 169/332 (50%), Positives = 224/332 (67%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + K P W + +A+ L+ E + +++ +++Q D +++ ELA EE D Sbjct: 2 IENFEEKMAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQQDYDDAVVMTELADEEGDD 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S+ E + ++ + VE + + LL+ D +A LE+H GAGGTESQDW ML RMYT Sbjct: 62 SLAGEIGETIKDLVKRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYT 121 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAEKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR Sbjct: 122 RWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF S V P ++D IE++I D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV Sbjct: 182 HTSFVSCDVVPEINDEIELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVT 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQ KN+ +A MLR+KLYE +++++++ ++EI WG QIRSYV PY M Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQKKELAEIRGEQSEIAWGSQIRSYVFHPYSM 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KD RT +E + V+DGDLD F+ L + Sbjct: 302 AKDHRTQVETGNIGAVMDGDLDAFIDGYLRSQ 333 >gi|290892673|ref|ZP_06555665.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071] gi|290557733|gb|EFD91255.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071] gi|307572036|emb|CAR85215.1| peptide chain release factor 2 [Listeria monocytogenes L99] Length = 338 Score = 368 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 170/336 (50%), Positives = 221/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336 >gi|319650621|ref|ZP_08004761.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2] gi|317397802|gb|EFV78500.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2] Length = 331 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 216/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A++++ E L + ++ + + + EL EE D + + Sbjct: 1 MLQPGFWDDQQAAQVVISESNSLKEQVVEFHDLYETFENLELTYELVKEESDAELQADLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L+ + + + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ Sbjct: 61 EELKDLVKRLNDFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++E + +IGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRERAMKMLQAKLYQKKIEEQEAELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 TEVGNVQGVMDGDLDMFINAYLRSK 325 >gi|309804632|ref|ZP_07698697.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c] gi|308166024|gb|EFO68242.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c] Length = 359 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 220/351 (62%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LGGLFD+DN + ++ K D W + A+ ++ ++ + + + Sbjct: 1 MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +EL E + +L E + ++++K E + LLSG+ D ++A LE+H Sbjct: 61 SAALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G LK Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAGGQH Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + + + Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351 >gi|224438340|ref|ZP_03659267.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818] gi|313144782|ref|ZP_07806975.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818] gi|313129813|gb|EFR47430.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818] Length = 365 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 240/351 (68%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + D+ +R+ +N W + +A + +E++ + +S E+ Sbjct: 13 LQNKAQNIAKILNPDSLQKRMDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L E+A E D S L+ +N++ ++ ++ + E +LSGE DS++A + + Sbjct: 73 KAELDDAKELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSSNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RW+E+R FK E L+ DGEEAGIK A +IKG NAYG+ K Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDHQDGEEAGIKGAAFIIKGENAYGYAK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A ML++KLYELE K+ E + + Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSE--GVANAE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+EIGWG QIRSYVL PYQ VKDLR+N + VLDGD+DD +++ L + Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTEGVLDGDIDDLIESVLVL 361 >gi|104780459|ref|YP_606957.1| peptide chain release factor 2 [Pseudomonas entomophila L48] gi|95109446|emb|CAK14147.1| peptide chain release factor 2 [Pseudomonas entomophila L48] Length = 364 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 182/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + G D+D+ RL +N + ED +W A+ L RER L + + ++ Sbjct: 13 LTERSQSIRGYLDYDHKHDRLVEVNRELEDAAVWNKPEYAQALGRERAMLAQVVETLDKL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL++A+EE+D + + L+ ++ ++ +F + SGE D N+AYL++ Sbjct: 73 SGGLADCQDLLDMAVEENDEGAVGDVVTELEGLEEKLAQLEFRRMFSGEMDMNNAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ IKG A+GWL+ Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQH Sbjct: 193 TEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E S Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDS 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E++ VLDGDLD +++A+L Sbjct: 313 KSDIGWGHQIRSYVLDDS-RIKDLRTGVERSDCQKVLDGDLDQYLEASLK 361 >gi|327190272|gb|EGE57372.1| peptide chain release factor 2 [Rhizobium etli CNPAF512] Length = 342 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 237/329 (72%), Positives = 285/329 (86%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP+LW + EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S++ Sbjct: 1 MNNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDLSVV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA++YE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT + T+P DVLDGDL++FM+A LA + Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALAHR 329 >gi|91205413|ref|YP_537768.1| peptide chain release factor 2 [Rickettsia bellii RML369-C] gi|122425715|sp|Q1RIY5|RF2_RICBR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|91068957|gb|ABE04679.1| Peptide chain release factor RF-2 [Rickettsia bellii RML369-C] Length = 368 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 192/352 (54%), Positives = 250/352 (71%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D + + RL+ L P LW + A+ L+RE+ +L+ + + Sbjct: 11 KIEQSLELLRRSLDVETSAARLAELEELAASPDLWNDQANAQKLLREKSNLEEQLGAYNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D L L E+A E+D I+Q+ +LQ + + E L SGEADSN+ +LE+ Sbjct: 71 IRSNLKDALELEEMAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGWL Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPYQMVKDLRT+ E + VLDGDL++F+ A+LA+ Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 362 >gi|242129269|gb|ACS83718.1| peptide chain release factor 2 [uncultured bacterium AOCefta2] Length = 367 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 163/344 (47%), Positives = 219/344 (63%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD L ++ W + A+ +++ L + + D+L Sbjct: 18 RSIFDVAGKRVDAERLEAESAAGDFWNDNQRAQEHLKKLTALKRVVEPWDALDRDTSDSL 77 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + E+ E D S+ E + + +F+S+LS D +D++L +H GAGGTES Sbjct: 78 EMAEMLKAEGDESMAPELEKQAAELAQRLNDLEFKSMLSEAEDVSDSFLHIHPGAGGTES 137 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWANMLLRMYTRWAE++ FK E +++ GE AGI TL ++G A+G+LK E GVHRL Sbjct: 138 CDWANMLLRMYTRWAERKGFKVELIDLQPGEGAGISRVTLAVRGEYAFGYLKAESGVHRL 197 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N RRHTSF+S+ Y V D IE+EI + D RIDTYR+SGAGGQHVN TDSAV Sbjct: 198 VRISPFDANKRRHTSFASVHAYAEVTDDIEVEILDKDLRIDTYRSSGAGGQHVNVTDSAV 257 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPT +VV CQ ERSQHKNKA A +LR++LY+L ++RE K +I WG Sbjct: 258 RITHIPTKIVVSCQNERSQHKNKATAMKVLRSRLYQLYKEQREADQAAKAGEKKDISWGS 317 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV QPYQMVKDLRT++E ++ V+DG +D F++A L + Sbjct: 318 QIRSYVFQPYQMVKDLRTDVETSNIGAVMDGAIDPFIEAFLRSQ 361 >gi|222085647|ref|YP_002544177.1| peptide chain release factor 2 [Agrobacterium radiobacter K84] gi|221723095|gb|ACM26251.1| peptide chain release factor 2 [Agrobacterium radiobacter K84] Length = 345 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 233/329 (70%), Positives = 283/329 (86%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 LN K+EDP+LW + EA+ LMRERQ LD+ IS ++ ++ ++ DN+ L+EL EE D ++ Sbjct: 4 LNNKSEDPNLWNDATEAQKLMRERQQLDDGISGVRALEQQVADNVELIELGEEEGDADVV 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E + L+ +K E +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 64 REAEEALKALKTEAARRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 124 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIW+YPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ Sbjct: 184 FSSIWIYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA++YE EL KREE AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 244 ERSQHKNRAKAWDMLRARMYEAELMKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 303 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT + T+P DVLDGDL++FM+A LA + Sbjct: 304 LRTGVTSTAPDDVLDGDLNEFMEAALAHR 332 >gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] Length = 348 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 169/339 (49%), Positives = 231/339 (68%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ Q+L L+ P W + +A+ + ER +L + + + I++++ +EL Sbjct: 3 LEDIKQKLKELDEIMSSPDFWNDQKKAQKISAERTYLSDKLEKLNNIEEKINYLEEYIEL 62 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E D Q+ + ++ ++ + + ESLLSGE DS +A + V AG+GG E+ DWA Sbjct: 63 LELEPDEEAKQDLENEIKNLETLINKFEVESLLSGEYDSKNAIVSVQAGSGGVEACDWAE 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 MLLRMY RWAEK + E ++ + AGIKSAT ++KGP AYG+L+GEQGVHRLVRISP Sbjct: 123 MLLRMYLRWAEKNGYNVEIVDYQPDDVAGIKSATFIVKGPYAYGYLQGEQGVHRLVRISP 182 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +DSN RRHTSF+++ V P + + I++EI+E D RIDT+RASGAGGQHVN TDSAVRITHI Sbjct: 183 FDSNKRRHTSFAAVSVIPEIGEEIKVEINEDDLRIDTFRASGAGGQHVNKTDSAVRITHI 242 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 PTG+VV CQ ERSQ +N+A+A ML+AKLY+LE++K++E E K EI WG QIRSY Sbjct: 243 PTGIVVSCQSERSQIQNRAKAMQMLKAKLYQLEIEKQKEKRKELEGEKKEISWGSQIRSY 302 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 V PYQMVKDLRT E + V+DG++D FM+ L K Sbjct: 303 VFHPYQMVKDLRTGYETGNIQAVMDGEIDSFMETYLKYK 341 >gi|228999928|ref|ZP_04159500.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17] gi|229007481|ref|ZP_04165078.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4] gi|228753869|gb|EEM03310.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4] gi|228759870|gb|EEM08844.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17] Length = 326 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 165/321 (51%), Positives = 214/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + +++ + + + EL EE D + +E ++ Sbjct: 4 GFWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 63 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK + Sbjct: 64 SLVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVD 123 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D IEIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 184 EFNDDIEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ N + EIGWG QIRSYV PY +VKD RTN E Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324 >gi|118580454|ref|YP_901704.1| peptide chain release factor 2 [Pelobacter propionicus DSM 2379] gi|118503164|gb|ABK99646.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter propionicus DSM 2379] Length = 361 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 173/343 (50%), Positives = 237/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GGLFD D + + + +K P W N ++ +++ER L+ + + + D Sbjct: 9 GGLFDVDGKRESIQEIESKIAAPGFWDNADSSQGILKERTSLEKIVQLWDSLVRQQEDVR 68 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +++EL EE D L+E + R++ VE +F+ +LSGE D N ++ ++ GAGGTES Sbjct: 69 VMIELGEEEADEETLKEVGEMNNRLQQGVEAAEFQRMLSGEHDRNSCFISINPGAGGTES 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY R+ EK+ +KT + G+EAGIKSAT + G AYG+LK E G+HRL Sbjct: 129 QDWAEMLLRMYLRYCEKKGWKTSITDYQSGDEAGIKSATFSVSGEYAYGYLKAEAGIHRL 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VRISP+DSN+RRHTSF+S++ +P + ++ I+I+I++SD R+DT+R+ GAGGQHVNTTDSA Sbjct: 189 VRISPFDSNARRHTSFASVYAFPEIEEEDIDIKIADSDLRVDTFRSGGAGGQHVNTTDSA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +VV CQ ERSQ N+A A +LRAKLYE E+Q+R A+ S K EIGWG Sbjct: 249 VRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEVQERTARASEIASEKKEIGWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL PY+MVKDLRT +E +P VLDG L++F+ A L Sbjct: 309 SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEEFVVAYLM 351 >gi|302390246|ref|YP_003826067.1| bacterial peptide chain release factor 2 (bRF-2) [Thermosediminibacter oceani DSM 16646] gi|302200874|gb|ADL08444.1| bacterial peptide chain release factor 2 (bRF-2) [Thermosediminibacter oceani DSM 16646] Length = 365 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 163/346 (47%), Positives = 229/346 (66%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D ++ L KT P+ W + A+ +++ L + + I+ + Sbjct: 16 IQEMRDALEIDRLKSEIAQLEEKTLTPNFWDDAQAAQKILQTLNQLKETVEKFEAIKKKW 75 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + L+EL +E+ D + E S + K E E + ++LL G D N+A L +HAGAG Sbjct: 76 EDLMTLIELGIEDHDEGLYGEISAEAEEFKKEFEEMRLKTLLRGRYDKNNAILSLHAGAG 135 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMYTRWAE + +K + L++ GEEAGIKSAT+L++GP AYG+LK EQG Sbjct: 136 GTEAQDWVQMLLRMYTRWAEDKGYKVKVLDMLPGEEAGIKSATILVEGPYAYGYLKSEQG 195 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+D+ RRHTSF+S+ V P ++D IE+EI D +I+T+R+ GAGGQ+VN T Sbjct: 196 VHRLVRISPFDAAGRRHTSFASVDVIPEIEDDIEVEIKPEDLKIETFRSGGAGGQYVNKT 255 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITHIPTG+VV CQ ERSQ N+ A +LRAKL+ L L+++++ N + EI Sbjct: 256 ESAVRITHIPTGIVVTCQNERSQQSNRNTAMKLLRAKLFNLYLEEQQKKINELRGEQKEI 315 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L Sbjct: 316 AWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDMFINAYLK 361 >gi|255283235|ref|ZP_05347790.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469] gi|255266308|gb|EET59513.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469] Length = 334 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 162/324 (50%), Positives = 218/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + ++ M+ + L + + ++++ + L+E+A EE+D S++ E Sbjct: 1 MEEPDFWDDPESSQESMKTLKALKDDVETYAVLKEQYEEIETLIEMAYEENDASLILEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L E + +LLSGE D NDA + +HAGAGGTES DWA ML RMYTRWA+K+ Sbjct: 61 ETLDSFIATFENIRIRTLLSGEYDKNDAIVTLHAGAGGTESCDWAGMLYRMYTRWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E L+ DGEEAGIKS T ++G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 YTVEVLDYLDGEEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IEI E D RIDTYR+SGAGGQH+N T SAVRITH+PT +VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEIREEDLRIDTYRSSGAGGQHINKTSSAVRITHLPTNIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKLY L+ Q+ E + EIGWG QIRSYV+QPY MVKD RTN Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKVSGIRGEVKEIGWGNQIRSYVMQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG++D F+ A L Sbjct: 301 AETGNVDSVMDGNIDLFINAYLKW 324 >gi|226225057|ref|YP_002759164.1| peptide chain release factor 2 [Listeria monocytogenes Clip81459] gi|258611946|ref|ZP_05243310.2| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503] gi|293596308|ref|ZP_05230370.2| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194] gi|293596920|ref|ZP_05265609.2| peptide chain release factor 2 [Listeria monocytogenes HPB2262] gi|300764992|ref|ZP_07074980.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017] gi|225877519|emb|CAS06233.1| Putative peptide chain release factor 2 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258607352|gb|EEW19960.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503] gi|293583807|gb|EFF95839.1| peptide chain release factor 2 [Listeria monocytogenes HPB2262] gi|293594612|gb|EFG02373.1| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194] gi|300514292|gb|EFK41351.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017] gi|332312939|gb|EGJ26034.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott A] Length = 338 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 169/336 (50%), Positives = 221/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLD+F+ A L + Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 336 >gi|261367680|ref|ZP_05980563.1| peptide chain release factor 2 [Subdoligranulum variabile DSM 15176] gi|282570473|gb|EFB76008.1| peptide chain release factor 2 [Subdoligranulum variabile DSM 15176] Length = 373 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 153/351 (43%), Positives = 228/351 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ L + + +RL+ L + P + + +++ ++ E + N + ++ Sbjct: 14 MKTSVDDLRDALSIEASEKRLAELEHQMTLPGFYDDQEKSQRVISEMGEVKNKLERFGKL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + LLE+ EE+D S+ E ++ ++ ++ Q ++L+GE D N+A L H Sbjct: 74 STQYEEAETLLEMIEEENDPSLASEGEQAVEGVEKAIDELQLMTMLNGEYDHNNAILTFH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GGTE+QDWA ML RMYTRWAE + E L++ DG+EAGIKSA+++IKG NAYG LK Sbjct: 134 AGTGGTEAQDWAEMLYRMYTRWAEAHGYSVEVLDVLDGDEAGIKSASMMIKGANAYGMLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N+RR TSF+S+ V P ++D+I+IEI+ +D + YR+SGAGGQH Sbjct: 194 SEHGVHRLVRISPFDANARRQTSFASLEVMPELNDNIQIEINPADIEMQVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+ H PTG+V CQ +RSQ +N+ A M++AKLY++ LQ+ ++ + + Sbjct: 254 INKTSSAVRLIHKPTGIVTSCQTQRSQLQNREYAMEMMKAKLYQIALQQHKDKIDDIKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI WG QIRSYV PY +VKD RTN E + V+DGDLD F+ A L Sbjct: 314 QNEIAWGHQIRSYVFMPYTLVKDHRTNYESGNVQAVMDGDLDGFIYAYLKA 364 >gi|218660225|ref|ZP_03516155.1| peptide chain release factor 2 [Rhizobium etli IE4771] Length = 350 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 237/329 (72%), Positives = 285/329 (86%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP+LW + EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S++ Sbjct: 1 MNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA++YE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT + T+P DVLDGDL++FM+A LA + Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALAHR 329 >gi|256848105|ref|ZP_05553549.1| peptide chain release factor 2 [Lactobacillus coleohominis 101-4-CHN] gi|256715165|gb|EEU30142.1| peptide chain release factor 2 [Lactobacillus coleohominis 101-4-CHN] Length = 332 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 214/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ L+ + L ++D+L D +EL E D + +E Sbjct: 1 MTAPDFWNDSEQAQKLINDNNQLKERRDTFTNLRDQLADLATSVELLKEMPDDDLQKELD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L +++ ++E + LLSG D+N+A LE+H GAGGTE+QDW MLLRMY RWA++ Sbjct: 61 QKLPQVEKQLEQYRLSQLLSGPYDANNAILEIHPGAGGTEAQDWGEMLLRMYLRWADQHS 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E GEEAGIKS TLLIKG NA+G+L E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FDVETAAYEAGEEAGIKSVTLLIKGHNAFGYLHPEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D+S+E++I SD R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V Q ERSQ Sbjct: 181 DVMPELDESVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRVTAMNMLKSKLYELEQEKQAKQRAELEGEQLEIGWGSQIRSYVFHPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 301 YETHDGQSVMDGDLDPFINAYLQWQ 325 >gi|81428109|ref|YP_395108.1| peptide chain release factor 2 [Lactobacillus sakei subsp. sakei 23K] gi|78609750|emb|CAI54796.1| Peptide chain release factor 2 [Lactobacillus sakei subsp. sakei 23K] Length = 332 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 213/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + A+ L+ + L ++Q + + + LEL EE D + Sbjct: 1 MGDPDFWNDQQSAQQLIDQNNVLKEKYDSFNQLQAQFEELSVTLELLQEEPDDELQASFE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L++I+ ++ + LLSGE DSN+A +E+H GAGGTESQDW MLLRMY RWA+ Sbjct: 61 ADLEQIQSQMRQYELGQLLSGEYDSNNAIVELHPGAGGTESQDWGAMLLRMYLRWADAHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E + GEEAGIKS TL+IKG NAYG L+ E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FTVETEDYQAGEEAGIKSVTLMIKGHNAYGLLRSEKGVHRLVRISPFDSAGRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SI+IE+ D R+D +R+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ Sbjct: 181 DVMPELDGSIDIEVRTEDLRVDVFRSSGAGGQHINKTSSAVRLTHLPTGIVVSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML+AKLY+ E +++ + A + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LQNRETAMNMLKAKLYQKEQEEQAKKAAAIKGEQLEIGWGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD FM A L + Sbjct: 301 YETGNGQAVMDGDLDPFMYAYLQWQ 325 >gi|224475896|ref|YP_002633502.1| peptide chain release factor RF-2, major part [Staphylococcus carnosus subsp. carnosus TM300] gi|222420503|emb|CAL27317.1| peptide chain release factor RF-2, major part [Staphylococcus carnosus subsp. carnosus TM300] Length = 333 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 156/327 (47%), Positives = 221/327 (67%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 DP+ W + +A+ ++ + L + ++ ++++ L D EL EE D + + Sbjct: 1 MMTDPNFWDDQNKAQEIIDKNNALKHVVNGYRDLEAELEDMSATHELLAEEFDEDLKADL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +++ + + LL+G D+N+A LE+H GAGGTESQDWA+MLLRMY R+AE++ Sbjct: 61 EEEANAFKDKLDQFELQLLLNGPYDANNAILELHPGAGGTESQDWASMLLRMYQRYAEQQ 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E + G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 GFKVEFADYLPGDEAGVKSVTLVIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P ++ IEIE++ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPEFSNNEIEIEVNPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++E + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E + + V+DG++ F++A L + Sbjct: 301 TNEETGNVNAVMDGEIGPFIEAYLRTQ 327 >gi|329571835|gb|EGG53513.1| peptide chain release factor 2 [Enterococcus faecalis TX1467] Length = 327 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRI P+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRILPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|257416283|ref|ZP_05593277.1| peptide chain release factor 2 [Enterococcus faecalis AR01/DG] gi|257158111|gb|EEU88071.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG] Length = 327 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINLDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|323486370|ref|ZP_08091695.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum WAL-14163] gi|323695006|ref|ZP_08109153.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673] gi|323400352|gb|EGA92725.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum WAL-14163] gi|323500950|gb|EGB16865.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673] Length = 335 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 154/324 (47%), Positives = 224/324 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + + +RE ++L + + + ++ + D I++E+ EE+D S++ E Sbjct: 1 MEEPGFWDDPERSTKTVREAKNLKDTVETYRHLEQQYEDIQIMIEMGYEENDPSMIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L +E + ++LLSGE D+ +A L+++AGAGGTE+ DW +ML RMY RWA+K+ Sbjct: 61 EMLDEFINSLEDIRTKTLLSGEYDNCNAILKLNAGAGGTEAMDWCSMLYRMYQRWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + TE L+ DG+EAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 YTTEVLDFLDGDEAGIKSITVQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IE+++ D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEVNQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKLY L+ Q+ E + +I +G QIRSYV+QPY +VKD RTN Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DGD+D F+ A L Sbjct: 301 AENGNVNAVMDGDIDLFISAYLKW 324 >gi|290890028|ref|ZP_06553113.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429] gi|290480375|gb|EFD89014.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429] Length = 372 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 214/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q++ D D ++ K P W + A+ ++ E L N + Sbjct: 13 MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + EL EEDD + E ++++ + ++E LL+ + DSN+A LE+H Sbjct: 73 QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GGTES DWA+ L RMYTRWA+ FK E + G+ AGI SATL I G NAYG+L+ Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241 E+GVHR VRISP+DS RRHTSF SI V P +DD IEIEI D ++D YR+ GAGGQ Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN +AVR+THIPTG+VV Q ER+Q+ N+ A ML+AKLYE E QKREE Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K ++ WG QIRSYV QPY+MVKDLR+ E V+DG+LD F+ A L K Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 365 >gi|152991913|ref|YP_001357634.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1] gi|166225117|sp|A6Q718|RF2_SULNB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151423774|dbj|BAF71277.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1] Length = 364 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 169/349 (48%), Positives = 233/349 (66%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS+++ + + D +RL + +DP+ W + A + +E+ + + Sbjct: 13 LSKKMENISNIVKPDELKKRLDEIEEMQQDPNFWNDTANAGKISQEKTRTERILETYHNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D + D + E+A E D L+ ++ + +K + + +LSGE DSN+A + +H Sbjct: 73 NDAVYDAIEYFEMAKAEKDEETLEMLYEDAETLKERTNALEVQMMLSGEHDSNNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RWAE+ FK E L+ GEEAGIK + +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+IEI + D RIDTYRASGAGGQH Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFTSVMVSPEIDDDIDIEIEDKDLRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH PTG+VVQCQ +RSQHKNK+ A ML+++LYE E+ K++ A I Sbjct: 253 VNKTESAIRITHEPTGIVVQCQNDRSQHKNKSAAMKMLKSRLYEYEMAKKQ--AEIDGVE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K++IGWG QIRSYV+QPYQ VKD R+ T+ +LDGD+D ++ L Sbjct: 311 KSDIGWGHQIRSYVMQPYQQVKDTRSGQAFTNVDAILDGDIDKLLEGVL 359 >gi|116490620|ref|YP_810164.1| peptide chain release factor 2 [Oenococcus oeni PSU-1] gi|122277196|sp|Q04GC3|RF2_OENOB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116091345|gb|ABJ56499.1| bacterial peptide chain release factor 2 (bRF-2) [Oenococcus oeni PSU-1] Length = 372 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 214/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q++ D D ++ K P W + A+ ++ E L N + Sbjct: 13 MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + EL EEDD + E ++++ + ++E LL+ + DSN+A LE+H Sbjct: 73 QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GGTES DWA+ L RMYTRWA+ FK E + G+ AGI SATL I G NAYG+L+ Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241 E+GVHR VRISP+DS RRHTSF SI V P +DD IEIEI D ++D YR+ GAGGQ Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN +AVR+THIPTG+VV Q ER+Q+ N+ A ML+AKLYE E QKREE Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEQEEQKREEEHAKLSG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K ++ WG QIRSYV QPY+MVKDLR+ E V+DG+LD F+ A L K Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 365 >gi|297626158|ref|YP_003687921.1| peptide chain release factor 2 (RF-2) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921923|emb|CBL56483.1| Peptide chain release factor 2 (RF-2) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 369 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 158/354 (44%), Positives = 221/354 (62%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L++ L+ + + D +++ L T+ P LW + A+ + L +++ ++ Sbjct: 12 QLNKSLSSIEAVVDVPAKNKQIEELETEASAPDLWNDQEHAQSVTSRLSRLQSSVEKVQT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D LLELA EE D QE + + E++ + ++LLSGE D DA + + Sbjct: 72 LRSRLDDASTLLELASEESDADTAQEAEKEIATLADEIDTLEVQTLLSGEYDERDALVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + AGG ++ D+A MLLRMY RWAE+ + E +I EEAGIKSAT +K P AYG L Sbjct: 132 RSEAGGVDAADFAAMLLRMYERWAERHAYSYEVYDISYAEEAGIKSATFTVKSPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ I+I E D R+D + ASG GGQ Sbjct: 192 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDNIDIPEKDIRVDVFHASGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA +L+AKL LE ++E A + Sbjct: 252 GVNTTDSAVRITHLPTGIVVTCQNERSQIQNKAAGLRVLQAKL--LERARQEREAEMDAL 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E SP +V DGD+D F++ + ++ Sbjct: 310 KSDGNSWGSQMRSYVLHPYQMVKDLRTGFESGSPDNVFDGDIDGFIERGIRWRR 363 >gi|118586958|ref|ZP_01544390.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163] gi|118432580|gb|EAV39314.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163] Length = 378 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 214/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q++ D D ++ K P W + A+ ++ E L N + Sbjct: 19 MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 78 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + EL EEDD + E ++++ + ++E LL+ + DSN+A LE+H Sbjct: 79 QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 138 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GGTES DWA+ L RMYTRWA+ FK E + G+ AGI SATL I G NAYG+L+ Sbjct: 139 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 198 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241 E+GVHR VRISP+DS RRHTSF SI V P +DD IEIEI D ++D YR+ GAGGQ Sbjct: 199 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 258 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN +AVR+THIPTG+VV Q ER+Q+ N+ A ML+AKLYE E QKREE Sbjct: 259 NVNKVSTAVRLTHIPTGLVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 318 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K ++ WG QIRSYV QPY+MVKDLR+ E V+DG+LD F+ A L K Sbjct: 319 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 371 >gi|218666919|ref|YP_002424975.1| peptide chain release factor 2, programmed frameshift [Acidithiobacillus ferrooxidans ATCC 23270] gi|226739123|sp|B7J4M2|RF2_ACIF2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|218519132|gb|ACK79718.1| peptide chain release factor 2, programmed frameshift [Acidithiobacillus ferrooxidans ATCC 23270] Length = 365 Score = 366 bits (940), Expect = 2e-99, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D + RL + + EDP +W N +A+ L RER L+ I+ + ++ Sbjct: 14 LQVRVAGLRGYLDLEEKRGRLEEVQRELEDPTIWNNAEKAQELGRERSALEAVITPMDKL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +LELAL E D +L +L VE +F+ + SG D+ + ++++ Sbjct: 74 TASLADGGEMLELALSEQDAELLAAVDADLDTALSLVEKLEFQRMFSGAQDAANCFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA M+LRMY WAE F E +E+ +GE AGIKSA++ ++G +A+GWL+ Sbjct: 134 AGAGGTEAQDWAEMILRMYLHWAESHGFAAELVEVSEGEVAGIKSASIHVRGDHAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++VYP +DDS E++I+ +D ++DTYRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEIDDSFEVDINPADLKVDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH+P+G+VV CQ +RSQHKN+A+A MLR+KLYE+E+QKR E S Sbjct: 254 VNKTDSAIRITHVPSGIVVACQTDRSQHKNRAEAMRMLRSKLYEMEMQKRAVEKQALEDS 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E VLDG LD F++A L Sbjct: 314 KSDIGWGHQIRSYVL-DQSRIKDLRTGVEVGDTQKVLDGALDMFIEAALKA 363 >gi|224503251|ref|ZP_03671558.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-561] Length = 338 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 169/336 (50%), Positives = 220/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336 >gi|228993892|ref|ZP_04153795.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442] gi|228765843|gb|EEM14494.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442] Length = 327 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 164/321 (51%), Positives = 214/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + +++ + + + EL EE D + +E ++ Sbjct: 5 GFWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 64 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK + Sbjct: 65 SLVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVD 124 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D IEIE+ D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 EFNDDIEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 244 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ N + EIGWG QIRSYV PY +VKD RTN E Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325 >gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2] gi|166225114|sp|A6Q582|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2] Length = 368 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 233/353 (66%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL +++ + + D +RL + P W + +A + +E+ L + +E Sbjct: 12 KLEQKIENIKNIIKPDLITKRLKEIEQLENSPDFWNDAKKAGEIQKEKNRLSRILEKFEE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L E+A EE+D L + ++ +V + E++LSGE D +A + + Sbjct: 72 ARSSVEDAKDLFEMATEEEDTETLNMLFEEAPTLEEKVNKIEIETMLSGENDDKNAIVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA++L RMY RWAE+ FK E L+ +GEEAGIK + +IKG NAYG+L Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERHGFKVEVLDYQEGEEAGIKDVSFIIKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DSN+RRHTSF+S+ V P VDD I I I + D R+DTYRASGAGGQ Sbjct: 192 KAENGIHRLVRISPFDSNARRHTSFASVMVSPEVDDDINIVIEDKDIRVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSA+RITHIPTG+VVQCQ +RSQHKN+A A ML+++LYELEL+K+ Sbjct: 252 HVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELEKKRAEQE--GI 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++IGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L + Sbjct: 310 EKSDIGWGHQIRSYVLAPYQQVKDTRSNKAYSNVEAILDGDIDKIIEDVLIAE 362 >gi|294340483|emb|CAZ88864.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As] Length = 331 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 165/323 (51%), Positives = 234/323 (72%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 EDP +W + A+ L RER+ L+ + ++ + L D+ L E++ EE D + + Sbjct: 7 LEDPQVWNDPKRAQELGRERKSLETVVLGLESLTTALADHSELFEMSREEGDDATCEAIE 66 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++++ EVE +F + S D ++ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ Sbjct: 67 ADVEKSADEVEALEFRRMFSNPLDPSNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKG 126 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE +E +G+ AGI+SAT+ ++G AYG L+ E GVHRLVR SP+DS+ RHTSF+S+ Sbjct: 127 FKTEVMEETEGDVAGIRSATIKVEGDYAYGQLRTETGVHRLVRKSPFDSSGGRHTSFASV 186 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +VYP VDDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQ Sbjct: 187 FVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQ 246 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKN+A+AW MLR++LYE E++KR ES+K+++GWG QIRSYVL +KDLRTN Sbjct: 247 HKNRAEAWQMLRSRLYEHEMRKRMAEQQTLESTKSDVGWGHQIRSYVL-DQSRIKDLRTN 305 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 +E ++ VLDGDLD+F+ A+L Sbjct: 306 VEISNTQKVLDGDLDEFITASLK 328 >gi|160941606|ref|ZP_02088937.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC BAA-613] gi|158435500|gb|EDP13267.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC BAA-613] Length = 339 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 155/324 (47%), Positives = 219/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W ++ ++RE ++L + + + ++ + D +++++ EE+D S++ E Sbjct: 1 MEEPGFWDEPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYEENDSSLIPEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L++ K +E + + LLSGE DSN+A L ++AGAGGTES DW ++L RMY RWAE + Sbjct: 61 EMLEQFKETLENMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSILYRMYCRWAESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK L+ DGEEAGIKS T+ I G NAYG+L+ E GVHRLVRISP++S +R TSF S Sbjct: 121 FKAHVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ I+IE++ D R+DTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ Sbjct: 181 DVMPNIEEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKL ++ +++ A +IGWG QIRSYVLQPY MVKD RT Sbjct: 241 FQNKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG +D+F+ A L Sbjct: 301 EESGNVDAVLDGAIDNFISAYLRW 324 >gi|153810056|ref|ZP_01962724.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174] gi|149834234|gb|EDM89314.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174] Length = 335 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 153/324 (47%), Positives = 216/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W N ++ M+E + + + + ++ ++ D ++E+ EE+D I+ E Sbjct: 1 MEAPDFWDNAEVSQQKMKELKSMKDDMEIYHSLETQMEDMETMIEMGYEENDPEIIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + ++LLSGE DS +A ++++AGAGGTE+ DW ML RMY+RW +++ Sbjct: 61 EMLDEFQKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAG+KS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FTMEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKLY L+ Q+ E + T+IGWG QIRSYV+QPY MVKD RT+ Sbjct: 241 HMNKDKAMQMLKAKLYLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDGD+D F+ A L Sbjct: 301 EETGNVDAVLDGDIDPFINAYLKW 324 >gi|227872846|ref|ZP_03991157.1| peptide chain release factor RF2 [Oribacterium sinus F0268] gi|227841316|gb|EEJ51635.1| peptide chain release factor RF2 [Oribacterium sinus F0268] Length = 378 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 157/357 (43%), Positives = 219/357 (61%), Gaps = 3/357 (0%) Query: 2 KLSRQ---LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 +LS + L L D D +R+ L+ E+P W + +A L E +HL + + Sbjct: 10 ELSSKEEPLQQLEAALDLDTKRKRIIELDRMMEEPDFWGDPEKANKLSTEARHLKDELEG 69 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ D L+++ EE+D S++ E + L ++ LLSGE DS + Sbjct: 70 FTALKGNYEDIEALIQMGKEENDDSVIPEIRELLDSFSERLDQMNTTLLLSGEYDSMNVI 129 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L ++AGAGGTE+ DWA +L RMYTRWAE+ F + L+ DG+EAGIKS T+ + G AY Sbjct: 130 LRLNAGAGGTEANDWAGILYRMYTRWAERHGFTVKILDYLDGDEAGIKSVTMEVVGEYAY 189 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+L+ E G+HRLVRISP+++ +R TSF S V P ++ I+IEI E D +++ +RASGA Sbjct: 190 GYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDIEIREEDIKMEVFRASGA 249 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQH+N T SAVR+ HIPTG V CQ+ERSQ +NK +A ML+ KLY E +++E Sbjct: 250 GGQHINKTSSAVRLIHIPTGFVAACQEERSQLQNKNKAMQMLKTKLYLKEKEEQEAKLAG 309 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + GWG QIRSYVLQPY+MVKDLRT E + VLDGD+D F+ A L + Sbjct: 310 IRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEESGNTDAVLDGDIDRFISAYLKWMQ 366 >gi|56551094|ref|YP_161933.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761334|ref|ZP_04759422.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753249|ref|YP_003226142.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56542668|gb|AAV88822.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ZM4] gi|241374241|gb|EER63738.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552612|gb|ACV75558.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 375 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 206/352 (58%), Positives = 266/352 (75%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + L L DWD A++RL LN + EDP LW + A+ +MRER LD +I+ + I Sbjct: 12 IQESLALLRRFLDWDRALRRLDELNARVEDPSLWDDARAAQEVMRERGRLDESIAATRAI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L +N+ L+E+A E + ++Q+ L+ + + + ++LLSGEAD ND Y+EV+ Sbjct: 72 ATELQENIELIEMAEAEGEEEMVQDAISALESLAERADRDKVKALLSGEADGNDTYIEVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA ML RMY RWAE++ FK E ++ H GE+AGIKSATLL+KG +AYG+ K Sbjct: 132 AGAGGTESQDWAEMLSRMYQRWAERQGFKVELVDYHAGEQAGIKSATLLVKGESAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+ VYPVVDD I+IE+ + D +IDTYR+SGAGGQH Sbjct: 192 TENGVHRLVRISPFDSNARRHTSFASVAVYPVVDDDIDIEVLDKDLKIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ +RSQHKN+A+A L+A+LYE ELQ RE A+ G ++ Sbjct: 252 VNTTDSAVRITHMPTGIVVACQNQRSQHKNRAEAMKQLKARLYERELQIREAEASAGYAA 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVLQPYQ+VKDLRT I T+P+DVLDG+LD F+ A LA + Sbjct: 312 KSEIGWGHQIRSYVLQPYQLVKDLRTGITSTAPADVLDGNLDAFIAAALAQR 363 >gi|291522080|emb|CBK80373.1| bacterial peptide chain release factor 2 (bRF-2) [Coprococcus catus GD/7] Length = 336 Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats. Identities = 157/325 (48%), Positives = 220/325 (67%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 E+P W N +A M+E ++L + + ++ D LLE+ EE+D S++ E Sbjct: 1 MMEEPGFWDNADKANNSMKELKNLKDTVEEYHRLETAWEDVETLLEMGYEENDASLIPEV 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + + E+ + ++LLS E D ++A + +HAGAGGTE+ DW +ML RMYTRWAEK Sbjct: 61 QEAMADFEKRFEHLRIKTLLSEEYDGDNAIVTLHAGAGGTEACDWVSMLFRMYTRWAEKH 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F T L+ DGEEAGIKS T+ I G NAYG++K E+G+HRLVRISP+++ +R TSF+S Sbjct: 121 GFTTTVLDYLDGEEAGIKSVTVEIAGENAYGYMKSEKGIHRLVRISPFNAAGKRQTSFAS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PT +VVQCQ ERS Sbjct: 181 CDVMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTNIVVQCQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH NK +A ML+AKLY L+ Q+ +E + + WG QIRSYV+QPY++VKD RT Sbjct: 241 QHMNKDKAMQMLKAKLYLLKQQENQEKLSGIRGEVKDNAWGSQIRSYVMQPYKLVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 E ++ V+DGD+D F+ A L Sbjct: 301 GAESSNVDAVMDGDIDLFINAYLKW 325 >gi|290968807|ref|ZP_06560344.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str. 28L] gi|290781103|gb|EFD93694.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str. 28L] Length = 352 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 152/338 (44%), Positives = 221/338 (65%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +R+ L+ + DP W + A+ + +E L + + + +++ D LELA+ Sbjct: 3 RKEERIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELAM 62 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE D S+ + + + EVE ++ LLSGE D +A + HAGAGGTE+QDW ML Sbjct: 63 EEKDTSLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQML 122 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +RMYTRWAE+ + +++ G+EAG+KSAT + G AYG+LK E+GVHRLVRISP+D Sbjct: 123 IRMYTRWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISPFD 182 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + +RRHTSF+++ V P + D ++++I+ + R+D +RASGAGGQHVN T SAVR+TH+PT Sbjct: 183 AAARRHTSFTAVDVMPELPDDVDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLPT 242 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ ERSQ +NK LRAKL+ELE +K+ ++ + I WG QIRSYV Sbjct: 243 GIVVQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEWGSQIRSYVF 302 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 PY +VKD RT++E + V+DG+LD F++ L +K Sbjct: 303 HPYNLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREK 340 >gi|47096102|ref|ZP_00233703.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a F6854] gi|258611482|ref|ZP_05232771.2| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165] gi|258612274|ref|ZP_05269486.2| peptide chain release factor 2 [Listeria monocytogenes F6900] gi|293596674|ref|ZP_05263420.2| peptide chain release factor 2 [Listeria monocytogenes J2818] gi|47015563|gb|EAL06495.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a F6854] gi|258600468|gb|EEW13793.1| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165] gi|258610392|gb|EEW23000.1| peptide chain release factor 2 [Listeria monocytogenes F6900] gi|293591414|gb|EFF99748.1| peptide chain release factor 2 [Listeria monocytogenes J2818] Length = 338 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 169/336 (50%), Positives = 220/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336 >gi|75759027|ref|ZP_00739135.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228903659|ref|ZP_04067779.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222] gi|228911012|ref|ZP_04074820.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200] gi|228968278|ref|ZP_04129276.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|74493493|gb|EAO56601.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228791451|gb|EEM39055.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228848667|gb|EEM93513.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200] gi|228855927|gb|EEN00467.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222] Length = 326 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + + +++ + + + EL EE D + +E Sbjct: 1 MMSAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|225375950|ref|ZP_03753171.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM 16841] gi|225212203|gb|EEG94557.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM 16841] Length = 338 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 157/324 (48%), Positives = 219/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ED W + + ++ M+ + + + ++ +++ + D L+E+ EE+D S++ E Sbjct: 1 MEDGDFWNDPVVSQNKMKTLKSMKDDVATYEKLATQFDDIETLIEMGYEENDASLIPEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + ++LLSGE D ++A L +HAGAGGTES DWA ML RMY++WA+ R Sbjct: 61 EMLNEFVTTFDNIRIKTLLSGEYDGDNAILSLHAGAGGTESCDWAQMLFRMYSKWADSRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ L+ DG+EAGIKS T I G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 YELVVLDSLDGDEAGIKSITFQINGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+NK +A ML+AKLY L+ Q+ E A TEIGWG QIRSYV+QPY MVKD RT Sbjct: 241 HQNKDKAMQMLKAKLYLLKEQENAEKAAGIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + V+DG +D F+ L Sbjct: 301 VETGNVDSVMDGKIDLFINGYLKW 324 >gi|152979178|ref|YP_001344807.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z] gi|150840901|gb|ABR74872.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z] Length = 335 Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats. Identities = 174/333 (52%), Positives = 234/333 (70%), Gaps = 1/333 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +RL +N + E P +W +A+ L +ER L+ + IK++ L D LLELA+E + Sbjct: 2 ERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAVVDTIKKLDQGLEDVDGLLELAVEGE 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D E L ++ ++ +F + SGE D+ D Y+++ AG+GGTE+QDW MLLRM Sbjct: 62 DQETFDEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRM 121 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLVR SP+DSN+ Sbjct: 122 YLRWAESKGFKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNN 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF++ +VYP +DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+V Sbjct: 182 RRHTSFAAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ +RSQHKNK Q L+AKLYE+ELQK+ E SK++IGWG QIRSYVL Sbjct: 242 VQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDDS 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 -RIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 333 >gi|114776305|ref|ZP_01451350.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1] gi|114553135|gb|EAU55533.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1] Length = 372 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 182/342 (53%), Positives = 233/342 (68%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG FD D + L LN + EDP LW EA+ LM+E+ ++ + + L D L Sbjct: 23 GGHFDVDAREEELRELNARIEDPTLWDRPEEAQKLMQEKTRIERTLQTFHNSTEALDDAL 82 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+ EE D E + L ++ E+E + +L GE D+ A+L+++AG+GGTE+ Sbjct: 83 TLFEMGAEESDPDTQMEAVETLDSVQAELEALELARMLGGETDAESAFLDINAGSGGTEA 142 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RWAE++ FKTE +E GEEAGIKSAT+ IKG AYG+LK E GVHRL Sbjct: 143 QDWAEMLLRMYLRWAERKGFKTELMECTAGEEAGIKSATVSIKGEYAYGFLKAEVGVHRL 202 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SPYDS +RRHTSF+S++ YP ++ IEI+I SD R DTYRASGAGGQH+N TDSAV Sbjct: 203 VRKSPYDSGNRRHTSFASVFAYPDIEKDIEIDIDPSDVRTDTYRASGAGGQHINKTDSAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PT +VVQCQ +RSQHKN+A AW+ML+A+LYE EL R E KT+IGWG Sbjct: 263 RLTHVPTNIVVQCQNDRSQHKNRAAAWSMLKARLYEHELNLRNAEKQEIEDGKTDIGWGH 322 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + LDGD+D F++A L Sbjct: 323 QIRSYVL-DQSRIKDLRTGMETGNTQAFLDGDIDAFIQAELM 363 >gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548] gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus prevotii DSM 20548] Length = 367 Score = 365 bits (938), Expect = 4e-99, Method: Composition-based stats. Identities = 161/354 (45%), Positives = 234/354 (66%), Gaps = 2/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++L +G D + + + L ++ P W + +A+ +M + + +S K++ Sbjct: 14 LSQKLKLIGDSLDPASLEKEIKELEKQSASPDFWNDSDKAQKIMADLASKKDELSDYKKL 73 Query: 63 QDRLCDNLILLELAL--EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L DN +L+L EE + ++E D+L+ + + + L GE D N+AY+ Sbjct: 74 ENGLVDNTDMLDLVEMSEEKETDTIEEVEDSLKNLAKLATQMKLRTQLDGEYDKNNAYIS 133 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGG E+ DWA+ML RMY R+ + FK E ++++ E GIKSAT+ + GP AYG+ Sbjct: 134 INAGAGGLEATDWADMLFRMYKRYFDSIGFKYEIKDLNNEEAGGIKSATMHVTGPYAYGY 193 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E+GVHRLVRISP+DS SRRHTSF+S+ V+P +D++IE++I SD RIDTYRASGAGG Sbjct: 194 LKAEKGVHRLVRISPFDSQSRRHTSFASVDVFPELDENIELDIDPSDLRIDTYRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN TDSAVRITHIPTGVV Q ERSQ +N+ A N+L++KL +++ +++ E + Sbjct: 254 QHVNKTDSAVRITHIPTGVVATSQAERSQIQNRQTAMNLLKSKLVQIKEEEQREKIEDIQ 313 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S ++I WG QIRSYV QPY +VKD RT E + V+DGD+ F+ A LA K Sbjct: 314 GSYSQIAWGSQIRSYVFQPYTLVKDHRTGFEMGNVEAVMDGDIQGFIDAFLADK 367 >gi|157693929|ref|YP_001488391.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032] gi|157682687|gb|ABV63831.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032] Length = 327 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + W + +A+ ++ E L + ++ E+ + + + +L E+ D + E Sbjct: 1 MSEADFWNDQQKAQGVINEANALKDNVNAYHELSESHEELQMTHDLLKEDYDEELHVELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R Sbjct: 61 KELKNLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ I+I+I D ++DTYRASGAGGQHVNTTDSAVRITHIPT VVV CQ ERSQ Sbjct: 181 DVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML++KLY+ +++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNRERAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 TEMGNVQAVMDGDLDSFIDAYLRSK 325 >gi|302671676|ref|YP_003831636.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus B316] gi|302396149|gb|ADL35054.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus B316] Length = 380 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 155/354 (43%), Positives = 222/354 (62%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L L+ + D + + L+ + E+P W N +A ++ +++ + ++ I+ Sbjct: 13 NLKGTLDEVTASLDLGTKKKIIEELSREMEEPGFWDNAEKANKKTKDLKNMQDLVADIER 72 Query: 62 IQDRLCDNLILLELALEE--DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + + D + L+++ E DD + E L + ++E + +LL+ D D L Sbjct: 73 LNSQYTDIIDLIDMQNAEGVDDDDMAAEIRSELDEFEEKLENIRISNLLNQPYDKYDVIL 132 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 ++AGAGGTE+ DWA+ML RMYTRWAE++ F TE L++ DG+EAGIKS T I G NAYG Sbjct: 133 RLNAGAGGTEACDWASMLYRMYTRWAERKGFTTEVLDLLDGDEAGIKSVTFQISGTNAYG 192 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E GVHRLVRISP+++ ++R TSF S V P +++ ++IEI+ D RIDTYR+SGAG Sbjct: 193 LLKSEHGVHRLVRISPFNAQAKRQTSFVSCDVMPDIEEDLDIEINPDDLRIDTYRSSGAG 252 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH+N T SAVRITHIPTGVVV CQ ERSQ +NK +A ML+AKL+ ++ +++ Sbjct: 253 GQHINKTSSAVRITHIPTGVVVACQNERSQFQNKDKAMQMLKAKLFIMKQEEQAAKLAGI 312 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + WG QIRSYVLQPY MV D RT + ++ VLDG+LD F+ A L Sbjct: 313 RGEVMDNAWGSQIRSYVLQPYTMVNDTRTGFKASNADGVLDGELDPFINAYLKW 366 >gi|302878965|ref|YP_003847529.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2] gi|302581754|gb|ADL55765.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2] Length = 367 Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats. Identities = 180/350 (51%), Positives = 247/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + N L D+D +RL+ + EDP +WQ+ A+ L RER+ L++ + + +I Sbjct: 16 LSLRSNELRRYLDYDTKQERLTEVCELAEDPAIWQDAKRAQELGRERKMLESVVFGLGKI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q L D L E++ EE+D + L T+ ++ I+ V +F + + D N ++++ Sbjct: 76 QQDLTDAAELFEMSQEENDEASLMSTAADIDDIERRVAEMEFRRMFNHPMDPNSCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY R+AE++ ++ E LEI DG+ AGIK A++ + G A+G L+ Sbjct: 136 AGSGGTEAQDWASMLMRMYVRYAERKGYQVEVLEISDGDVAGIKGASIKLIGEYAFGHLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D R+DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRVDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPT +VVQCQ +RSQH+N+A+A ML++++YE EL+KR E E Sbjct: 256 INKTDSAVRITHIPTNIVVQCQSDRSQHRNRAEAMAMLKSRMYEEELRKRNEEKQEMEDG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT+IGWG QIRSYVL +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 316 KTDIGWGHQIRSYVL-DQSRIKDLRTNHEVGNTQGVLDGDLDDFISASLK 364 >gi|222530070|ref|YP_002573952.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM 6725] gi|222456917|gb|ACM61179.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM 6725] Length = 372 Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats. Identities = 172/349 (49%), Positives = 236/349 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L +G LFD D L L T+T P WQ++ ++ ++++ + + + I +++ Sbjct: 15 EEDLKEMGFLFDIDGLESELKSLETETSKPEFWQDIENSQRILQKIKRIKDKIERFQKLY 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL++EE + + +E L ++ +++ + E LL+G D N+A L +HA Sbjct: 75 SQWEDLKVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDTYR+SGAGGQHV Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363 >gi|254437327|ref|ZP_05050821.1| peptide chain release factor 2 [Octadecabacter antarcticus 307] gi|198252773|gb|EDY77087.1| peptide chain release factor 2 [Octadecabacter antarcticus 307] Length = 375 Score = 365 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 192/354 (54%), Positives = 252/354 (71%), Gaps = 1/354 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +++ + L+ L +WD A RL N + EDP LW + A+ LMR+RQ L +AI+ + Sbjct: 10 VEIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPEAAQKLMRDRQSLVDAIASYE 69 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 I+ L D++ L+E+ EDD I+ E + L+ + + K+ E+LL+GEAD+ND +LE Sbjct: 70 VIKQELSDHIELIEMGEMEDDSDIVTEAEEALKVLAAKAAKKELEALLNGEADANDTFLE 129 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +++GAGGTE+ DWA ML RMY RWAE++ +K + GEE GIKSA+ I G NAYGW Sbjct: 130 INSGAGGTEACDWAAMLARMYIRWAERKGYKVDLQSESAGEEVGIKSASYKISGHNAYGW 189 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGG Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 250 QHVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVH 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 309 ENAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAMD 362 >gi|328948955|ref|YP_004366292.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489] gi|328449279|gb|AEB14995.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489] Length = 381 Score = 365 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 226/353 (64%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + G D D+ ++++ T P W + +A +M + + L I ++ Sbjct: 15 QLKADVSAVWGRLDVDDINKKIAEKEALTTAPGFWDDNAKATKIMNDIKLLKGRIEPWQD 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D L EL LEE+D SI E + ++ K + E++ +LLS E D ND +L V Sbjct: 75 LVQRVDDLEALYELGLEENDKSIESELKEQYEKAKADYEHQSILNLLSDEVDKNDCFLSV 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+ DW ML RMY RWAE+ +K E L + E G+KS + I GP YG+ Sbjct: 135 HAGAGGTEACDWTFMLSRMYQRWAERHGYKVEVLSQEEAE-GGLKSINMKISGPYVYGYT 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D+N+RRHTSF+S++V+PV+DDSIE+ I D R+DTYR+ G GGQ Sbjct: 194 KGEAGVHRLVRISPFDANARRHTSFASVYVFPVLDDSIEVNIDPKDLRVDTYRSGGKGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR THIPTG+VV C ERSQ N+A A ++L+++LYE ++RE+ + Sbjct: 254 HVNKTESAVRFTHIPTGIVVACDSERSQLMNRASAMSILKSRLYEYYKEEREKENSKFAG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I +G QIRSYV QPY MVKD RT + V+DGD+D F+ L+ K Sbjct: 314 EKKDISFGSQIRSYVFQPYTMVKDHRTKYSVGNIQGVMDGDIDGFLDEFLSAK 366 >gi|254468217|ref|ZP_05081623.1| peptide chain release factor 2 [beta proteobacterium KB13] gi|207087027|gb|EDZ64310.1| peptide chain release factor 2 [beta proteobacterium KB13] Length = 351 Score = 365 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 168/342 (49%), Positives = 239/342 (69%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G +FD DN ++L L + EDP +W++ ++ + +E++ L++ I +++ + +N Sbjct: 8 GAIFDLDNKKEQLKELTRQQEDPKIWEDHSLSQKIGKEKRILEDTIQEFEQLNSGIENNK 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L +LA EE D S L + + + ++ +F+ + S D N+ +++ +G+GGTE+ Sbjct: 68 ELFDLAFEESDDSTLNDLFQDTINLDKKLGQLEFKRMFSNPLDPNNCFIDFQSGSGGTEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWANMLLRMY R+ E++ FK E +EI +GE AGIK AT+ I G AYG+ + E G+HRL Sbjct: 128 QDWANMLLRMYLRYCEEKGFKVEVMEITEGEVAGIKGATIKIIGDYAYGYFRTETGIHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS SRRHTSF+ + VYP +D+S+EI+I+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 188 VRKSPFDSGSRRHTSFAGVNVYPEIDESVEIDINPADLRIDTYRASGAGGQHINKTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+GVVVQCQ +RSQH+NKAQA +ML+A+LY +EL KR E E +K++IGWG Sbjct: 248 RITHEPSGVVVQCQNDRSQHRNKAQAMDMLKAQLYRIELDKRNEEKQAMEDAKSDIGWGH 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDG+LD F+ +L Sbjct: 308 QIRSYVL-DQSRIKDLRTGVEVGNTQGVLDGNLDPFITESLK 348 >gi|295401151|ref|ZP_06811124.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius C56-YS93] gi|294976744|gb|EFG52349.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius C56-YS93] Length = 327 Score = 365 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 173/325 (53%), Positives = 223/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E L + + + +++R + + EL EE D + QE Sbjct: 1 MAAPDFWDDQKAAQTVINEANALKDLVGEFQSLEERFENLEVTYELIKEEPDEDLQQELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +R+ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 61 TEAKRLTKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIEI + RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ Sbjct: 181 EVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A NML+AKLY+ +L++++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREKALNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGNQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F+ A L K Sbjct: 301 VEVGNVQAVMDGEIDIFIDAYLRSK 325 >gi|47567398|ref|ZP_00238111.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47568468|ref|ZP_00239168.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47569292|ref|ZP_00239977.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|222098640|ref|YP_002532698.1| peptide chain release factor 2 [Bacillus cereus Q1] gi|228936472|ref|ZP_04099270.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228988409|ref|ZP_04148500.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229141914|ref|ZP_04270440.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26] gi|229158750|ref|ZP_04286808.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342] gi|47554063|gb|EAL12429.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47554859|gb|EAL13210.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47556019|gb|EAL14357.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|221242699|gb|ACM15409.1| peptide chain release factor [Bacillus cereus Q1] gi|228624734|gb|EEK81503.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342] gi|228641529|gb|EEK97834.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26] gi|228771265|gb|EEM19740.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228823304|gb|EEM69138.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 326 Score = 365 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 166/321 (51%), Positives = 215/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 5 GFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 64 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 65 GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIEI D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 EFNDEVEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 244 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325 >gi|191637822|ref|YP_001986988.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23] gi|190712124|emb|CAQ66130.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23] Length = 332 Score = 365 bits (936), Expect = 9e-99, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 210/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ L +++ L D EL +E D + QE Sbjct: 1 MAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENELEDLEAGFELLQDEPDKDLQQEEE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW +ML+RMY RWA++ Sbjct: 61 AKIKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D+SIE+++ D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V Q +RSQ Sbjct: 181 DVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NKA A ML+AKLY+ E + + A + + ++ +G QIRSYV PY MVKD RTN Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + + V+DGDL+ F+ A L + Sbjct: 301 YETGNGNAVMDGDLNPFINAYLQWE 325 >gi|255323776|ref|ZP_05364902.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum SK141] gi|255298956|gb|EET78247.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum SK141] Length = 367 Score = 365 bits (936), Expect = 9e-99, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 219/353 (62%), Gaps = 4/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 11 QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQKVTSELSAAQAKVRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE D S+ D L ++ +E + ++LSGE D +A + + Sbjct: 71 LRGRLEDMPVMYELAEEEGDTSL---ADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I ++D R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E+ Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEEQAELDALG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F+++ + + Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWR 359 >gi|229829544|ref|ZP_04455613.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM 14600] gi|229791533|gb|EEP27647.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM 14600] Length = 379 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 161/350 (46%), Positives = 234/350 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D ++ Q++ LN + E P W + + M+E + L + + +++ Sbjct: 16 KEPLAEVTRALDLESKHQKIEELNREMEAPDFWNDADLSARKMKELKSLKDDVEIADKLK 75 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + + + +L+++A EEDD ++ E + ++K + E + ++LLSGE D+N+A + +HA Sbjct: 76 NSIEEIGMLMDMANEEDDADMVGEIRLMMDQMKEDFERVRIKTLLSGEFDANNAIVTLHA 135 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW ML RMYTRWA + F+ E L+ DG+EAGIK+ T + G NAYG+LK Sbjct: 136 GAGGTEACDWTAMLYRMYTRWAAAQGFEVEELDYLDGDEAGIKAVTFQVNGENAYGYLKS 195 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++N +R TSFSS V P ++ +++E+ + D RIDTYR+SGAGGQH+ Sbjct: 196 EKGVHRLVRISPFNANGKRQTSFSSCDVMPELEQDLDVEVKDEDIRIDTYRSSGAGGQHI 255 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITH PTG+VVQCQ ERSQH NK +A ML+AKLY L++++++ A Sbjct: 256 NKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLYMLKMEEQKAKAEGIRGEV 315 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 T+I WG QIRSYV QPY MVKDLRT E + S V+DGD++ F+ A L Sbjct: 316 TDIAWGNQIRSYVFQPYTMVKDLRTGEETGNVSAVMDGDINLFINAYLRW 365 >gi|116051698|ref|YP_789463.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa UCBPP-PA14] gi|115586919|gb|ABJ12934.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa UCBPP-PA14] Length = 332 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 180/328 (54%), Positives = 240/328 (73%), Gaps = 1/328 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 +N + EDP++W N A+ L RER L + + ++ L D+ LL++A+EEDD Sbjct: 3 EVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMAVEEDDEGA 62 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 + + ++ ++R++ +E +F + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RW Sbjct: 63 VDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRW 122 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A+K F +E+ +GE AGIK AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHT Sbjct: 123 ADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHT 182 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ Sbjct: 183 SFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQ 242 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQH NK A MLRAKLYELE+QKR + E SK++IGWG QIRSYVL +K Sbjct: 243 NERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDSKSDIGWGHQIRSYVL-DQSRIK 301 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 DLRT IE++ VLDGDLD++++A+L Sbjct: 302 DLRTGIERSDCDKVLDGDLDEYLEASLK 329 >gi|229087663|ref|ZP_04219789.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44] gi|228695624|gb|EEL48483.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44] Length = 327 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 164/321 (51%), Positives = 215/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + + +++ + + + EL EE D + +E ++ Sbjct: 5 GFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 64 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 65 SLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 244 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325 >gi|167038149|ref|YP_001665727.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166856983|gb|ABY95391.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 330 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 221/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W ++ +++ L ++++ L + + + D L+EL LEE D SI E Sbjct: 1 MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + Sbjct: 61 KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325 >gi|148543602|ref|YP_001270972.1| peptide chain release factor 2 [Lactobacillus reuteri DSM 20016] gi|184153010|ref|YP_001841351.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112] gi|227363435|ref|ZP_03847559.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3] gi|325681956|ref|ZP_08161474.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A] gi|148530636|gb|ABQ82635.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus reuteri DSM 20016] gi|183224354|dbj|BAG24871.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112] gi|227071535|gb|EEI09834.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3] gi|324978600|gb|EGC15549.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A] Length = 332 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 211/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E L ++D++ D LEL E D + +E Sbjct: 1 MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSLELLAVEPDDDLQKEFE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + +E + LL GE D+ +A LE+H GAGGTE+QDW MLLRMY RW E+ Sbjct: 61 ASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS+E++I SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V Q ERSQ Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + +IGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325 >gi|148267214|ref|YP_001246157.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus JH9] gi|151220935|ref|YP_001331757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. Newman] gi|221141228|ref|ZP_03565721.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315812|ref|ZP_04839025.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732798|ref|ZP_04866963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus TCH130] gi|258418241|ref|ZP_05682506.1| peptide chain release factor 2 [Staphylococcus aureus A9763] gi|258430733|ref|ZP_05688445.1| peptide chain release factor 2 [Staphylococcus aureus A9299] gi|258440954|ref|ZP_05690789.1| peptide chain release factor 2 [Staphylococcus aureus A8115] gi|258445784|ref|ZP_05693961.1| peptide chain release factor 2 [Staphylococcus aureus A6300] gi|258449595|ref|ZP_05697697.1| peptide chain release factor 2 [Staphylococcus aureus A6224] gi|258452962|ref|ZP_05700956.1| peptide chain release factor 2 [Staphylococcus aureus A5948] gi|258453995|ref|ZP_05701967.1| peptide chain release factor 2 [Staphylococcus aureus A5937] gi|269202375|ref|YP_003281644.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ED98] gi|282895050|ref|ZP_06303271.1| peptide chain release factor 2 [Staphylococcus aureus A8117] gi|282916096|ref|ZP_06323859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus D139] gi|282922051|ref|ZP_06329748.1| peptide chain release factor 2 [Staphylococcus aureus A9765] gi|282926620|ref|ZP_06334250.1| peptide chain release factor 2 [Staphylococcus aureus A10102] gi|283769917|ref|ZP_06342809.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus H19] gi|297208519|ref|ZP_06924948.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912611|ref|ZP_07130054.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus TCH70] gi|304381625|ref|ZP_07364275.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|147740283|gb|ABQ48581.1| bacterial peptide chain release factor 2 (bRF-2) [Staphylococcus aureus subsp. aureus JH9] gi|150373735|dbj|BAF66995.1| peptide chain release factor 2, programmed frameshift [Staphylococcus aureus subsp. aureus str. Newman] gi|253729163|gb|EES97892.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus TCH130] gi|257839034|gb|EEV63513.1| peptide chain release factor 2 [Staphylococcus aureus A9763] gi|257849405|gb|EEV73375.1| peptide chain release factor 2 [Staphylococcus aureus A9299] gi|257852468|gb|EEV76389.1| peptide chain release factor 2 [Staphylococcus aureus A8115] gi|257855360|gb|EEV78298.1| peptide chain release factor 2 [Staphylococcus aureus A6300] gi|257857103|gb|EEV80002.1| peptide chain release factor 2 [Staphylococcus aureus A6224] gi|257859473|gb|EEV82327.1| peptide chain release factor 2 [Staphylococcus aureus A5948] gi|257863860|gb|EEV86616.1| peptide chain release factor 2 [Staphylococcus aureus A5937] gi|262074665|gb|ACY10638.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ED98] gi|282320044|gb|EFB50391.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus D139] gi|282591513|gb|EFB96585.1| peptide chain release factor 2 [Staphylococcus aureus A10102] gi|282593709|gb|EFB98701.1| peptide chain release factor 2 [Staphylococcus aureus A9765] gi|282762546|gb|EFC02685.1| peptide chain release factor 2 [Staphylococcus aureus A8117] gi|283460064|gb|EFC07154.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus H19] gi|296886774|gb|EFH25678.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886857|gb|EFK82059.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus TCH70] gi|302332463|gb|ADL22656.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus JKD6159] gi|302750651|gb|ADL64828.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339988|gb|EFM05932.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315129439|gb|EFT85432.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus CGS03] gi|315196430|gb|EFU26781.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus CGS01] gi|320139911|gb|EFW31772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA131] gi|323438713|gb|EGA96454.1| peptide chain release factor 2 [Staphylococcus aureus O11] gi|329723780|gb|EGG60308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 21189] gi|329724575|gb|EGG61082.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 21172] gi|329729572|gb|EGG65973.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 21193] Length = 331 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLR 325 >gi|258507895|ref|YP_003170646.1| peptide chain release factor 2 [Lactobacillus rhamnosus GG] gi|257147822|emb|CAR86795.1| Peptide chain release factor 2 [Lactobacillus rhamnosus GG] gi|259649221|dbj|BAI41383.1| protein chain release factor B [Lactobacillus rhamnosus GG] Length = 332 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 211/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ L +++ L D LEL +E D + +E Sbjct: 1 MAEPGFWDDSEAAQKVIDANNKLKEKHDRFYALENELEDLEAGLELLQDEPDPDLQREEE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW +ML+RMY RWA++ Sbjct: 61 TKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D+SIE++I D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V Q +RSQ Sbjct: 181 DVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NKA A ML+AKLY+ E + ++ A + + ++ +G QIRSYV PY MVKD RTN Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDL+ F+ A L + Sbjct: 301 YETGNGQAVMDGDLNPFINAYLQWE 325 >gi|118594576|ref|ZP_01551923.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181] gi|118440354|gb|EAV46981.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181] Length = 355 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 173/352 (49%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++ ++ L GG FD + + + L+ + EDP W + ++ + +E++ L++ + Sbjct: 2 LESTKNLIPCGGFFDLEEKKRTIKLLSIQQEDPKTWSDRALSQKIGKEKKVLEDIVHQAD 61 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + L DN L ++A+EE+D + L + ++++ V+ +F+ + S D N+ +++ Sbjct: 62 SLISDLADNQELFDMAVEENDLNTLTTIKSDTEKLEKSVDDIEFKRMFSHPMDPNNCFVD 121 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +G+GGTE+QDWANML RMYTR+AE++ FK E LE +GE AGIK ATL I G A+G+ Sbjct: 122 FQSGSGGTEAQDWANMLFRMYTRYAERKNFKIEVLEYTEGEVAGIKGATLKIIGDYAFGF 181 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DS SRRHTSF+ + VYP +D+SI+I+I+ SD RIDTYRASGAGG Sbjct: 182 LRTESGIHRLVRKSPFDSGSRRHTSFAGVNVYPEIDESIDIDINPSDLRIDTYRASGAGG 241 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N TDSAVRITH+PT VVQCQ +RSQH+NKAQA NML+A+LY +EL KR E E Sbjct: 242 QHINKTDSAVRITHVPTNTVVQCQNDRSQHRNKAQAMNMLKAQLYAIELSKRNEEKQAME 301 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KT+IGWG QIRSYVL +KDLRTN+E + VLDGDLD F+ +L Sbjct: 302 DAKTDIGWGHQIRSYVL-DQSRIKDLRTNLEVGNTQGVLDGDLDMFISESLK 352 >gi|15923744|ref|NP_371278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu50] gi|15926431|ref|NP_373964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus N315] gi|82750458|ref|YP_416199.1| peptide chain release factor 2 [Staphylococcus aureus RF122] gi|156979082|ref|YP_001441341.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu3] gi|253731382|ref|ZP_04865547.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|255005545|ref|ZP_05144146.2| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794925|ref|ZP_05643904.1| peptide chain release factor 2 [Staphylococcus aureus A9781] gi|262052329|ref|ZP_06024532.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3] gi|296275163|ref|ZP_06857670.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MR1] gi|13700645|dbj|BAB41942.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus N315] gi|14246523|dbj|BAB56916.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu50] gi|82655989|emb|CAI80394.1| peptide chain release factor 2 [Staphylococcus aureus RF122] gi|156721217|dbj|BAF77634.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu3] gi|253724907|gb|EES93636.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257788897|gb|EEV27237.1| peptide chain release factor 2 [Staphylococcus aureus A9781] gi|259159769|gb|EEW44810.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3] gi|283470047|emb|CAQ49258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ST398] gi|285816456|gb|ADC36943.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981] gi|298694086|gb|ADI97308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ED133] gi|312829246|emb|CBX34088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|320141998|gb|EFW33826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA177] gi|329313475|gb|AEB87888.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus T0131] Length = 330 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 159/324 (49%), Positives = 215/324 (66%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 N E V+DGD+ F+++ L Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLR 324 >gi|229020397|ref|ZP_04177152.1| Peptide chain release factor 2 [Bacillus cereus AH1273] gi|229026626|ref|ZP_04182968.1| Peptide chain release factor 2 [Bacillus cereus AH1272] gi|228734659|gb|EEL85311.1| Peptide chain release factor 2 [Bacillus cereus AH1272] gi|228740876|gb|EEL91119.1| Peptide chain release factor 2 [Bacillus cereus AH1273] Length = 326 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 163/325 (50%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + + +++ + + + EL EE D + +E Sbjct: 1 MMSAGFWDDQQGAQTVINEANALKDMVGSFRQLDETFENLEMTHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|199597236|ref|ZP_03210667.1| Protein chain release factor B [Lactobacillus rhamnosus HN001] gi|229551742|ref|ZP_04440467.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1] gi|258539140|ref|YP_003173639.1| peptide chain release factor B-like protein [Lactobacillus rhamnosus Lc 705] gi|199591752|gb|EDY99827.1| Protein chain release factor B [Lactobacillus rhamnosus HN001] gi|229314873|gb|EEN80846.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1] gi|257150816|emb|CAR89788.1| Peptide chain release factor 2 [Lactobacillus rhamnosus Lc 705] Length = 332 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 210/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ L +++ L D LEL +E D + E Sbjct: 1 MAEPGFWDDSEAAQKVIDANNKLKEKHDRFYALENELEDLEAGLELLQDEPDPDLQHEEE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW +ML+RMY RWA++ Sbjct: 61 TKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D+SIE++I D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V Q +RSQ Sbjct: 181 DVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NKA A ML+AKLY+ E + ++ A + + ++ +G QIRSYV PY MVKD RTN Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDL+ F+ A L + Sbjct: 301 YETGNGQAVMDGDLNPFINAYLQWE 325 >gi|257424874|ref|ZP_05601301.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257427542|ref|ZP_05603941.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257430173|ref|ZP_05606557.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 68-397] gi|257432874|ref|ZP_05609234.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus E1410] gi|257435778|ref|ZP_05611826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M876] gi|282913594|ref|ZP_06321383.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M899] gi|282918547|ref|ZP_06326284.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C427] gi|282923513|ref|ZP_06331193.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C101] gi|283957586|ref|ZP_06375039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|293500640|ref|ZP_06666491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 58-424] gi|293509587|ref|ZP_06668298.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M809] gi|293524173|ref|ZP_06670860.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M1015] gi|297590314|ref|ZP_06948953.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus MN8] gi|257272444|gb|EEV04567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257275735|gb|EEV07208.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257279370|gb|EEV09971.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 68-397] gi|257282289|gb|EEV12424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus E1410] gi|257284969|gb|EEV15088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M876] gi|282314381|gb|EFB44771.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C101] gi|282317681|gb|EFB48053.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C427] gi|282322626|gb|EFB52948.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M899] gi|283791037|gb|EFC29852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|290921136|gb|EFD98197.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M1015] gi|291095645|gb|EFE25906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 58-424] gi|291467684|gb|EFF10199.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M809] gi|297576613|gb|EFH95328.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus MN8] gi|312438819|gb|ADQ77890.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus TCH60] Length = 331 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLR 325 >gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745] gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus pentosaceus ATCC 25745] Length = 343 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 164/336 (48%), Positives = 221/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + +S K +P+ W N +A++++ E L K + D + + + EL Sbjct: 1 MNESISVNEAKMAEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEM 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 EDD + E L ++ + LL+G+ D+N+A +E+H GAGGTESQDW +MLL Sbjct: 61 EDDPDVQSEFESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE+ +FK + + GE AGI S T+ I G NAYG+L+ E+GVHRLVR+SP+DS Sbjct: 121 RMYTRWAEQHQFKVQIEDYQAGEVAGISSVTMRIVGHNAYGYLRSEKGVHRLVRLSPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DDS+E+ I++ D R+D YR+SGAGGQH+N T SAVRITH+PTG Sbjct: 181 AGRRHTSFASVDVMPELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV Q ERSQ +N+A A +ML+AKL+ELE QK+ E E + EIGWG QIRSYV Sbjct: 241 IVVASQAERSQLQNRATAMSMLKAKLFELEEQKKAEEKAKIEGIQLEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD R+N E + V+DGD DDF+ A L K Sbjct: 301 PYSMVKDHRSNFETANVQGVMDGDFDDFINAYLQWK 336 >gi|315194373|gb|EFU24765.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus CGS00] Length = 330 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 159/324 (49%), Positives = 215/324 (66%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 N E V+DGD+ F+++ L Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLR 324 >gi|228942321|ref|ZP_04104860.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975250|ref|ZP_04135808.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981888|ref|ZP_04142183.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407] gi|228778000|gb|EEM26272.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407] gi|228784529|gb|EEM32550.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817365|gb|EEM63451.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 326 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 164/321 (51%), Positives = 216/321 (67%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A++++ E L + + +++ + + + EL EE D + +E ++ Sbjct: 5 GFWDDQQGAQVVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 64 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 65 GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 244 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325 >gi|301165910|emb|CBW25483.1| peptide chain release factor 2 [Bacteriovorax marinus SJ] Length = 358 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 175/347 (50%), Positives = 228/347 (65%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG F+ + RLS ++ W + A + +E+ L + + +++ Sbjct: 1 MKTYGGHFEVERKSARLSEISDMEAMEGFWDDSDNAAKVQKEKSVLSDVVETYTTLKELF 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + +L+E A E+D E D + + + + LLSGE D N+A + ++AGAG Sbjct: 61 DEFEVLVEFANGEEDEDSALEAIDCYDKFLKQFNAAELKVLLSGEVDPNNAIVSINAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA+ML RM RWAE + FK + L++ DG+ AGIKSAT+ I G AYG+LK E G Sbjct: 121 GTESCDWASMLFRMINRWAESKAFKVQVLDVQDGDSAGIKSATMTISGNYAYGYLKSEIG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DSN+RRHTSFSSI+V P +DD+IEIEI + D +ID YR+ GAGGQ VNTT Sbjct: 181 VHRLVRISPFDSNARRHTSFSSIFVSPEIDDNIEIEILDKDLKIDVYRSGGAGGQSVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPT VV CQ ERSQ +NK QA +LR++LYELE++KR E+SK EI Sbjct: 241 DSAVRITHIPTNTVVTCQNERSQLQNKLQAMKVLRSRLYELEMEKRRAQEAETEASKQEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL PY++VKD RT+ E + VLDGDLD FM A L Sbjct: 301 GWGAQIRSYVLHPYKLVKDTRTSFESGNAEKVLDGDLDGFMDAFLRW 347 >gi|219849743|ref|YP_002464176.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485] gi|254790911|sp|B8G607|RF2_CHLAD RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|219544002|gb|ACL25740.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485] Length = 367 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 219/351 (62%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L G D + L + DP LW A+ LM+ L ++ ++ Sbjct: 12 IRERFANLRGHLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEEVALWNDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ L+ELA +E D S+ + + L+ ++ EV ++ E LLSG D DA+L + Sbjct: 72 DHRMTSLAELIELAEQEGDESLAADLAAELRAVQREVAQRELEILLSGPYDDRDAFLSIQ 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GGT++QDWA MLLRMYTRWAE+R + +++ +GEEAGIKSAT+ I+GP AYG+ + Sbjct: 132 AGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIRGPYAYGYAR 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRL+R+SP+++ R TSF+ + V P VDD+ E+EI D RID +R+ G GGQ Sbjct: 192 AEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKPEDLRIDVFRSGGHGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +N+ A +LRA+L E ELQ++ E Sbjct: 252 VNTTDSAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQAEERARLRGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +G Q+R+Y L P +VKD RT+ E ++ VLDG++D F++A L Sbjct: 312 YREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFLRA 362 >gi|73663271|ref|YP_302052.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495786|dbj|BAE19107.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 334 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 156/326 (47%), Positives = 220/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N +A+ ++ + L + ++ + ++ L D L LEEDD ++ Q+ Sbjct: 1 MTDPTFWDNQEKAQDVIDKNNALKSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++Q K E++ + + LL G D+N+A +E+H GAGGTESQDW NMLLRMY R+ E++ Sbjct: 61 QSVQDFKNELDQFELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E + G+EAG+KS TL++KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +++ IEI+I+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 181 DVIPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A L++KLY+L+++++E+ + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGEQKEIGWGSQIRSYVFHPYAMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E V+DGD+ F++A L + Sbjct: 301 NEETGKVDAVMDGDIGPFIEAFLRSQ 326 >gi|227356361|ref|ZP_03840749.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906] gi|227163471|gb|EEI48392.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906] Length = 320 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 176/318 (55%), Positives = 227/318 (71%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W +A+ L +ER L+ + I +++ L D LL+LA+E DD E L+ + Sbjct: 2 WNEPEKAQALGKERSSLEAIVETIDQLEQGLEDVSGLLDLAVEADDEETFNEAVAELEGL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 ++E +F + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE + Sbjct: 62 NKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESRGFKTEII 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP V Sbjct: 122 EESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK Q Sbjct: 182 DDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ++AKLYELE+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLKA 318 >gi|326389631|ref|ZP_08211197.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW 200] gi|325994346|gb|EGD52772.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW 200] Length = 330 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 221/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W ++ +++ L ++++ L + + + D L+EL L+E D SI E Sbjct: 1 MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLDEGDESITDEVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + Sbjct: 61 KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325 >gi|213965439|ref|ZP_03393634.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46] gi|213951823|gb|EEB63210.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46] Length = 370 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 212/353 (60%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D R+ L + DP LW + A+ + + I Sbjct: 11 ELDATLTTIEKVVDVDELSDRIRELEAQAADPSLWDDPDHAQQVTSALSQAQAKMKKIDS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE D ++ ++ +E + ++LSG D +A + + Sbjct: 71 LRGRLDDLSVMYELAEEESDSDAVEMADAERAELRAAIESLEVTTMLSGPYDEREAVINI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWA+K K E + EEAGIKSAT ++ G YG L Sbjct: 131 RSGAGGVDAADWAEMLMRMYLRWADKHGHKVEVYDTSYAEEAGIKSATFVVHGEYMYGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ I+I ESD RID YR+SG GGQ Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEETDHIDIPESDLRIDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV CQ E+SQH+NKA A +L+AKL E + + E Sbjct: 251 SVNTTDSAVRLTHVPTGIVVTCQNEKSQHQNKASAMRVLQAKLLEKKR-QEERAELDALG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E +P VLDGDLD F++A + + Sbjct: 310 AGGNASWGNQMRSYVLHPYQMVKDLRTEYEVNNPQSVLDGDLDGFIEAGIRWR 362 >gi|257886811|ref|ZP_05666464.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733] gi|257822865|gb|EEV49797.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733] Length = 327 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 161/324 (49%), Positives = 218/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ E + + L + +++++ EE D + +E Sbjct: 1 MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVDMLQEEPDAVMQEEAE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + LL G D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+ Sbjct: 61 TRINALDEKMNTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKAEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D++I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITH+PTG VV Q +RSQ Sbjct: 181 DVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + V+DGDLD F+ L + Sbjct: 301 VETGNVQAVMDGDLDLFIDGYLKM 324 >gi|169826759|ref|YP_001696917.1| peptide chain release factor 2 [Lysinibacillus sphaericus C3-41] gi|168991247|gb|ACA38787.1| Peptide chain release factor 2 (RF-2) [Lysinibacillus sphaericus C3-41] Length = 328 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 172/326 (52%), Positives = 224/326 (68%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P W + A++++ E L ++ KE+++ + + LEL EE D + +E Sbjct: 1 MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKELEETHENLDMTLELLREEPDEELQEEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 L + ++ + + LLSG D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 GKELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 GFKVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P D++IEI+I D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERS Sbjct: 181 CDVMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ +A ML+ KLY+LEL+K++ + + +IGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E + V+DGDLD F+ A L K Sbjct: 301 NEETGNVGAVMDGDLDPFINAYLRSK 326 >gi|229099612|ref|ZP_04230540.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29] gi|229105789|ref|ZP_04236418.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28] gi|229118678|ref|ZP_04248030.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3] gi|228664870|gb|EEL20360.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3] gi|228677678|gb|EEL31926.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28] gi|228683908|gb|EEL37858.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29] Length = 326 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 163/321 (50%), Positives = 215/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + + +++ + + + EL EE D + +E ++ Sbjct: 5 GFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 64 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 65 GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIE+ D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 244 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325 >gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] Length = 367 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 163/353 (46%), Positives = 239/353 (67%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + D D + L ++ W + +AK ++++R+ L+ ++ I+ Sbjct: 10 ELKERFEGIRKVLDIDRLKEELRKMDETMSAQGFWDDQEKAKKVIQKRKWLEETVNSIET 69 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L + EE D + ++ ++ +++ + ++ LSGE DS +AYL + Sbjct: 70 LEKSLRDVEELSQTTPEE-DTDTWAILEEEMESLEDKLKELELKTYLSGEMDSKNAYLTI 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTE+ DWA+ML RMY RWAE++ + E ++I + AGIKS TLL+KGP AYG+L Sbjct: 129 QAGAGGTEACDWADMLYRMYRRWAERKGYDVEVVDITPDDVAGIKSVTLLVKGPYAYGYL 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GEQGVHRLVRISP+DSN+RRHTSF+++ V P +D+ I IE+ + D +I+T+RASGAGGQ Sbjct: 189 RGEQGVHRLVRISPFDSNARRHTSFAAVSVMPQIDEDINIEVRDEDLKIETFRASGAGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN TD+AVR+THIPTG+VV CQQERSQ +N+ +A +L+AKLY+LE QK E E Sbjct: 249 YVNKTDTAVRLTHIPTGIVVSCQQERSQFQNRRKALELLKAKLYQLEQQKLMEKRKQYEG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYV PY++VKDLRT E + V+DGD+D F++ L + Sbjct: 309 EKTDIGWGHQIRSYVFHPYRLVKDLRTGYETGNVDAVMDGDIDQFIEGFLKWQ 361 >gi|257893004|ref|ZP_05672657.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408] gi|257829383|gb|EEV55990.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408] Length = 338 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 163/335 (48%), Positives = 224/335 (66%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ K +P W + A+ ++ E + + L + +++E+ E Sbjct: 1 MEEDIAEAEAKMAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D ++ +E + + +++ + LL G D N+A +E+H GAGGTESQDW +MLL Sbjct: 61 EPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE+ ++ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS Sbjct: 121 RMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF S+ V P +D++I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITH+PTG Sbjct: 181 AKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 VV Q +RSQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV Sbjct: 241 TVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 PY MVKD RTN+E + V+DGDLD F+ L + Sbjct: 301 PYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKM 335 >gi|295109041|emb|CBL22994.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus obeum A2-162] Length = 334 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 151/324 (46%), Positives = 216/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + ++ M+E + + + + ++ ++ D ++E+ EE+D I+ E Sbjct: 1 MEAPDFWDDAEVSQKKMKELKSMKDDMEIYHSLESQMEDMETMIEMGYEENDPEIIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + ++LLSGE DS +A ++++AGAGGTE+ DW ML RMY+RW +++ Sbjct: 61 EMLDEFEKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FTMEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKL+ L+ Q+ E + T+IGWG QIRSYV+QPY MVKD RT+ Sbjct: 241 HMNKDKAMQMLKAKLFLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG++D F+ A L Sbjct: 301 EETGNVDAVLDGEIDPFINAYLKW 324 >gi|312621634|ref|YP_004023247.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor kronotskyensis 2002] gi|312202101|gb|ADQ45428.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor kronotskyensis 2002] Length = 372 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 168/349 (48%), Positives = 232/349 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D D L L +T P WQ++ ++ ++++ + + + I +++ Sbjct: 15 EEDLKEMRVSLDIDGLESELKSLENETSKPEFWQDIENSQKVLQKIKRIKDKIERFQKLY 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL++EE + + +E L ++ +++ + E LL+G D N+A L +HA Sbjct: 75 SQWEDLKVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDTYR+SGAGGQHV Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363 >gi|162447197|ref|YP_001620329.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A] gi|189039998|sp|A9NF23|RF2_ACHLI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|161985304|gb|ABX80953.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A] Length = 365 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 165/351 (47%), Positives = 221/351 (62%), Gaps = 2/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ L D D RL + +P+ W + +AK + +E L I IQ Sbjct: 14 ETKIKDLENALDLDAINNRLKEIEPIMANPNFWNDSNQAKKISQELNQLTEKKQTITSIQ 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 ++ D L+ LE A E + ++ ++ + E LL+GE D N+A LE+H Sbjct: 74 NQYEDALMWLEEAKEG--TESWDILEAEIDSLQKKISEFEIEVLLNGEYDHNNAILELHP 131 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DW +L+RMY R+A + +K E L GEEAG+KS TL I GP AYG LK Sbjct: 132 GAGGTESMDWCGILMRMYERFAGYKGYKVEILNYLAGEEAGVKSVTLRISGPYAYGNLKS 191 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DSN RRHTSF S V P +D++ E+E+ + D R+DT+++SGAGGQ V Sbjct: 192 ERGVHRLVRISPFDSNKRRHTSFVSCDVAPEIDETSEVELKDDDIRMDTFQSSGAGGQSV 251 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVR+THIPTG+VV Q ERSQ KNK A +L++KL + EL++++ N + K Sbjct: 252 NTTYSAVRLTHIPTGIVVNIQNERSQIKNKEAAMQILKSKLIQKELEEKQAKLNALKGEK 311 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++IGWG QIRSYV QPYQMVKD RTN E + V+DGD+D F+ A L K Sbjct: 312 SDIGWGSQIRSYVFQPYQMVKDHRTNYEVGNIQSVMDGDIDGFINAYLKSK 362 >gi|30023221|ref|NP_834852.1| peptide chain release factor 2 [Bacillus cereus ATCC 14579] gi|29898781|gb|AAP12053.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus ATCC 14579] Length = 325 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 165/321 (51%), Positives = 215/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 4 GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 64 GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 184 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324 >gi|182419781|ref|ZP_02951021.1| peptide chain release factor 2 [Clostridium butyricum 5521] gi|237666525|ref|ZP_04526510.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376329|gb|EDT73911.1| peptide chain release factor 2 [Clostridium butyricum 5521] gi|237657724|gb|EEP55279.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 347 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 151/340 (44%), Positives = 219/340 (64%), Gaps = 1/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 FD + L L K ++P W + +A+ + ++ + + + I +++ +L D +L Sbjct: 6 HFDRAGLEKELHELECKMQEPGFWDDSKKAEEVTKKSKLIKDKIENYDKLKSQLDDIDVL 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++ +EEDD E ++ I+ E+E + LLSGE D N+A + +H G GGT++ D Sbjct: 66 KDI-MEEDDIESANEIIQTIKSIEHEIEDYNMKILLSGEYDKNNAIVTLHVGVGGTDAND 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W MLLRMYTRW E + + E +++ G+EAGIKS TL + G YG+LK E+G+HRLVR Sbjct: 125 WTEMLLRMYTRWCENKGYSVETIDLIAGDEAGIKSVTLKVTGEYVYGYLKAEKGIHRLVR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISPY++N +R TSF+S+ V P + +I I D ++DTYR+SG+GGQH+N TDSAVRI Sbjct: 185 ISPYNANGKRQTSFASMEVLPELTKEQDITIRPDDLKVDTYRSSGSGGQHINKTDSAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+VVQCQ ERSQ N+ A ML++KL EL+ + +E ++GWG QI Sbjct: 245 THIPTGIVVQCQNERSQFSNRETAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQI 304 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 RSYV PY MVKD RTN+E ++ + V+DGD+D F+ A L Sbjct: 305 RSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDLFINAFLK 344 >gi|227821685|ref|YP_002825655.1| peptide chain release factor 2 [Sinorhizobium fredii NGR234] gi|227340684|gb|ACP24902.1| peptide chain release factor 2 protein [Sinorhizobium fredii NGR234] Length = 342 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 230/329 (69%), Positives = 281/329 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP LW + EA+ LMRERQ LD++I+ ++ + +L DN+ L+EL EE D +I+ Sbjct: 1 MNNKAEDPTLWNDAGEAQKLMRERQQLDDSITGLRRFEQQLSDNIELIELGEEEGDSAIV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L++++ E KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMY+RWA Sbjct: 61 TEAEEALRQLRNEASKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYSRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ Sbjct: 181 FSSIWVYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA+LYE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT +E TSP DVLDG+L++FM+A LA + Sbjct: 301 LRTGVESTSPGDVLDGELNEFMEAALAHR 329 >gi|157363562|ref|YP_001470329.1| peptide chain release factor 2 [Thermotoga lettingae TMO] gi|166977374|sp|A8F531|RF2_THELT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157314166|gb|ABV33265.1| peptide chain release factor 2 [Thermotoga lettingae TMO] Length = 367 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 174/350 (49%), Positives = 235/350 (67%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L D D L + ++ DP +W++ +A + ++ + + +S I E Sbjct: 12 ELREKYLNFVKLIDPDKLNMELKKMESEMSDPEIWKDQRKAGEISKKVRRIKELLSDISE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D + +EL+ E+D I Q+ +Q ++ + Q E +L+ D N+AYL + Sbjct: 72 IERNFEDIDVGIELS--EEDPGIAQDIEKIVQEVEKNIRRFQLELILNDPLDQNNAYLSI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA MLLRMY RWAE++ F E L+ GEEAG+KSAT+L+KG AYG+L Sbjct: 130 HPGAGGTESHDWAQMLLRMYMRWAERKGFIVELLDFQPGEEAGLKSATILVKGEYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+ RRHTSF+S+ V P + D I++EI D RIDT+RASG GGQ Sbjct: 190 KHERGVHRLVRISPFDAAKRRHTSFASVNVVPEISDDIDVEIKPEDIRIDTFRASGHGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN TDSAVRITH+PTG+VV CQ ERSQH+NKA A +L+AKLY+LEL KR E + + Sbjct: 250 YVNRTDSAVRITHLPTGIVVSCQSERSQHQNKALAMKVLKAKLYQLELAKRREQLDEIQG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EI WG QIRSY+LQPY +VKD RT+IE + VLDG+LD F++A L Sbjct: 310 ELKEISWGNQIRSYILQPYTLVKDHRTDIETGNFDAVLDGELDQFIEAEL 359 >gi|291528563|emb|CBK94149.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium rectale M104/1] Length = 330 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 218/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + +++ M+E + + + ++ +++++ D ++E+ EE+D S++ E Sbjct: 1 MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + ++LLSGE D +A L ++AGAGGTES DWA+ML RMY++WA+K+ Sbjct: 61 QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEVKDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKLY L+ ++ EIGWG QIRSYVLQPY MVKD RT+ Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDG++D F+ L Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324 >gi|49478907|ref|YP_039176.1| peptide chain release factor 2 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140380|ref|YP_086452.1| peptide chain release factor 2 [Bacillus cereus E33L] gi|118480225|ref|YP_897376.1| peptide chain release factor 2 [Bacillus thuringiensis str. Al Hakam] gi|228923910|ref|ZP_04087187.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228930187|ref|ZP_04093196.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228948905|ref|ZP_04111178.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228955423|ref|ZP_04117428.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228961413|ref|ZP_04123027.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229050846|ref|ZP_04194398.1| Peptide chain release factor 2 [Bacillus cereus AH676] gi|229072632|ref|ZP_04205834.1| Peptide chain release factor 2 [Bacillus cereus F65185] gi|229082391|ref|ZP_04214854.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2] gi|229094280|ref|ZP_04225356.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42] gi|229112593|ref|ZP_04242130.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15] gi|229124692|ref|ZP_04253873.1| Peptide chain release factor 2 [Bacillus cereus 95/8201] gi|229130431|ref|ZP_04259388.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4] gi|229147710|ref|ZP_04276053.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24] gi|229153340|ref|ZP_04281518.1| Peptide chain release factor 2 [Bacillus cereus m1550] gi|229181440|ref|ZP_04308768.1| Peptide chain release factor 2 [Bacillus cereus 172560W] gi|229187396|ref|ZP_04314539.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1] gi|229193426|ref|ZP_04320374.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876] gi|229199302|ref|ZP_04325969.1| Peptide chain release factor 2 [Bacillus cereus m1293] gi|296505600|ref|YP_003667300.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171] gi|301056649|ref|YP_003794860.1| peptide chain release factor 2 [Bacillus anthracis CI] gi|49330463|gb|AAT61109.1| peptide chain release factor [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51973849|gb|AAU15399.1| peptide chain release factor 2 (RF-2) [Bacillus cereus E33L] gi|118419450|gb|ABK87869.1| bacterial peptide chain release factor 2 (bRF-2) [Bacillus thuringiensis str. Al Hakam] gi|228584162|gb|EEK42313.1| Peptide chain release factor 2 [Bacillus cereus m1293] gi|228590081|gb|EEK47952.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876] gi|228596100|gb|EEK53777.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1] gi|228602015|gb|EEK59508.1| Peptide chain release factor 2 [Bacillus cereus 172560W] gi|228629944|gb|EEK86595.1| Peptide chain release factor 2 [Bacillus cereus m1550] gi|228635723|gb|EEK92210.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24] gi|228653026|gb|EEL08907.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4] gi|228658787|gb|EEL14446.1| Peptide chain release factor 2 [Bacillus cereus 95/8201] gi|228670973|gb|EEL26280.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15] gi|228689133|gb|EEL42956.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42] gi|228700823|gb|EEL53346.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2] gi|228710608|gb|EEL62581.1| Peptide chain release factor 2 [Bacillus cereus F65185] gi|228722502|gb|EEL73895.1| Peptide chain release factor 2 [Bacillus cereus AH676] gi|228798298|gb|EEM45297.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804215|gb|EEM50829.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228810661|gb|EEM57009.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228829472|gb|EEM75100.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228835709|gb|EEM81073.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326652|gb|ADH09580.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171] gi|300378818|gb|ADK07722.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis str. CI] Length = 326 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 165/321 (51%), Positives = 215/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 5 GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 64 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 65 GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 244 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325 >gi|114771120|ref|ZP_01448560.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255] gi|114548402|gb|EAU51288.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255] Length = 375 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 200/354 (56%), Positives = 262/354 (74%), Gaps = 1/354 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +++ + L L DWD A R+ + +E+P LW N +A+ LMRERQ L ++IS K Sbjct: 10 VEIHKSLELLKQRMDWDTAEHRMEEFDAMSENPDLWNNPEKAQKLMRERQMLSDSISNFK 69 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+ L DN+ L+EL E+D I++E +N+ I+ E ++ E+LL+GE DSND +L+ Sbjct: 70 ELSSNLQDNIELIELGEIEEDEVIIKEAENNILIIQQESAKQELEALLNGEVDSNDTFLQ 129 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGGTES DWANML RMY RWAE++ ++ + +E G+EAGIKS T IKG NAYGW Sbjct: 130 INAGAGGTESCDWANMLARMYVRWAEQKGYQVDRMEESVGDEAGIKSVTYQIKGHNAYGW 189 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 +K E GVHRLVRISP+DSN++RHTSFSS+WVYPVVDD+I+IEI+ S+ R+DTYR+SGAGG Sbjct: 190 MKSESGVHRLVRISPFDSNAKRHTSFSSVWVYPVVDDNIDIEINPSEIRVDTYRSSGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITHIPT +VVQ E+SQH+N+A L+++LYELE++KR E Sbjct: 250 QHVNTTDSAVRITHIPTNIVVQSS-EKSQHQNRANCMAALKSRLYELEMRKRTEGIQEAH 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVL PYQMVKDLRTN+E + VL+GDLD FM ATLA+ Sbjct: 309 DNKGDAGWGNQIRSYVLHPYQMVKDLRTNVETSDSQGVLNGDLDMFMAATLALD 362 >gi|262049538|ref|ZP_06022408.1| peptide chain release factor 2 [Staphylococcus aureus D30] gi|259162374|gb|EEW46946.1| peptide chain release factor 2 [Staphylococcus aureus D30] Length = 330 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 159/324 (49%), Positives = 214/324 (66%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + + Sbjct: 1 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEYLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 N E V+DGD+ F+++ L Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLR 324 >gi|299535985|ref|ZP_07049304.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1] gi|298728590|gb|EFI69146.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1] Length = 328 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 173/326 (53%), Positives = 222/326 (68%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P W + A++++ E L ++ K++ + + + LEL EE D + +E Sbjct: 1 MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKDLVETHENLDMTLELLREEPDEELQEEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 L + ++ + + LLSG D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 GKELAEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TL IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLSIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P DD+IEI+I D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG +VQCQ ERS Sbjct: 181 CDVMPEFDDNIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTIVQCQAERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ +A ML+ KLY+LEL K++ + + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREKAMTMLKGKLYQLELDKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E + V+DGDLD F+ A L K Sbjct: 301 NEETGNVGAVMDGDLDPFINAYLRSK 326 >gi|116251510|ref|YP_767348.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae 3841] gi|115256158|emb|CAK07239.1| putative peptide chain release factor 2 (rf-2) [Rhizobium leguminosarum bv. viciae 3841] Length = 342 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 237/329 (72%), Positives = 285/329 (86%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP+LW + EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S++ Sbjct: 1 MNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ Sbjct: 181 FSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA++YE EL+KRE+ A+ +SKTEIGWG QIRSYVLQPYQMVKD Sbjct: 241 ERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWGHQIRSYVLQPYQMVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT + ++P DVLDGDL++FM+A LA + Sbjct: 301 LRTGVASSAPDDVLDGDLNEFMEAALAHR 329 >gi|76787098|ref|YP_329299.1| peptide chain release factor 2 [Streptococcus agalactiae A909] gi|123602195|sp|Q3K2F4|RF2_STRA1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|76562155|gb|ABA44739.1| peptide chain release factor 2, programmed frameshift [Streptococcus agalactiae A909] Length = 365 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 152/354 (42%), Positives = 221/354 (62%), Gaps = 2/354 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++ +L D D + ++ L + +P W + I A+ +E L Sbjct: 11 VENKEKLTSFRRSLDLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFH 70 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +Q+ + +LLE+ ++D S+ +E +NL ++ + + LLS D N+A LE Sbjct: 71 NMQELSDETELLLEML--DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILE 128 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H G+GGTE+QDW ++LLRMYTR+ FK E L+ G+EAGIKS TL +GPNAYG Sbjct: 129 IHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGL 188 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGG Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGG 248 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN + VR+THIPTG+VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALK 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYV PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362 >gi|229823414|ref|ZP_04449483.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271] gi|229787189|gb|EEP23303.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271] Length = 331 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 224/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ + S I +++ + D + LEL E +D IL E Sbjct: 1 MSAPDFWDDNEKAQKIISQLNLAKETYSTIHALEEGVADIEVALELYDESEDADILAEAE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++ +++ + + LLSG D+N+A LE+H GAGGTESQDW +MLLRMY RWA+K+ Sbjct: 61 GQVAQVQADLDAYEMKLLLSGPHDANNAILEIHPGAGGTESQDWGSMLLRMYQRWADKQG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK L+ DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+DSNSRRHTSF+S+ Sbjct: 121 FKVTVLDYQDGEEAGIKSVTLEIEGHNAYGYLKSEKGVHRLVRISPFDSNSRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P++DD+IEI+I+ D RIDTYRASGAGGQH+N T SA+RITHIPTG+V Q Q +RSQ Sbjct: 181 EVTPMLDDTIEIDINPDDLRIDTYRASGAGGQHINKTSSAIRITHIPTGIVTQSQSQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKLY+LE + + + + + +I WG QIRSYV PY MVKD RT+ Sbjct: 241 FQNRDLAMAMLKAKLYQLEEENKAKELAALKGEQKDIAWGSQIRSYVFHPYAMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDL+ F+ A L + Sbjct: 301 YEVGNTGAVMDGDLNGFIDAYLKWQ 325 >gi|325679774|ref|ZP_08159348.1| peptide chain release factor 2 [Ruminococcus albus 8] gi|324108589|gb|EGC02831.1| peptide chain release factor 2 [Ruminococcus albus 8] Length = 378 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 151/350 (43%), Positives = 231/350 (66%), Gaps = 3/350 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L ++D +NA +++ L+ K +P W + ++++++++ ++L+ + + Sbjct: 20 IKELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAA 79 Query: 67 CDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +++E+A EED+ +++E L ++K +++ E+LL+GE D ++A L HA Sbjct: 80 DDIEVMIEMAGEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHA 139 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDW ML+RMYT+WA+ F + ++I +G +AGIKS ++ I+G NAYG+LK Sbjct: 140 GAGGTEAQDWTEMLIRMYTKWADSHGFNAKIMDILEGGDAGIKSCSMFIEGENAYGYLKS 199 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRLVRISP+DS+ RHTSFS++ V P +DD+IE+EI D ++ YRASGAGGQH+ Sbjct: 200 ESGIHRLVRISPFDSSGSRHTSFSAVEVMPELDDNIEVEIRPEDIEMEVYRASGAGGQHI 259 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+ H PTG+V CQ +RSQ +N+ A ML+AKL E++ ++ E + + Sbjct: 260 NKTSSAVRLIHKPTGIVTACQTQRSQFQNRDYAMKMLKAKLIEIKEREHLEKIEDIKGVQ 319 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EI WG QIRSYV PY +VKDLRT E + V+DGDLD F+ A L Sbjct: 320 KEIAWGSQIRSYVFMPYTLVKDLRTGYEYNNVKAVMDGDLDGFINAYLKA 369 >gi|256750898|ref|ZP_05491782.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus CCSD1] gi|256750233|gb|EEU63253.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus CCSD1] Length = 330 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W ++ +++ L + ++ L + + + D L+EL LEE D SI E Sbjct: 1 MADPNFWNDIKKSQELAKRQKELKELLEEYNSLVTKWEDLSTLIELGLEEGDESITDEVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + Sbjct: 61 KEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + + IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVLPELKNDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325 >gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3] gi|123751448|sp|Q2JEW7|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3] Length = 366 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 155/354 (43%), Positives = 219/354 (61%), Gaps = 4/354 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R L + DP LW + A+ + R I+ ++ Sbjct: 11 QLDATLTGIETVLDVEGLRRRAEDLERQAADPDLWSDQDRAQAVTRRLSSTRGDIARVEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L D +L E + +L R+ ++ + +LLSGE D DA +++ Sbjct: 71 LRRRLDDIAAAADLG----DEDLLAEAAADLPRLSSDIAGLEVRTLLSGEYDERDAIVQL 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT +K P AYG L Sbjct: 127 SAGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKAPYAYGTL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S ++I + D RID +R+SG GGQ Sbjct: 187 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 246 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 247 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRITG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++ +G QIR+YVL PYQMVKDLRT+ E ++ S VLDG+LDDF+ A + ++ Sbjct: 307 GPQDVSFGSQIRNYVLHPYQMVKDLRTDTETSNTSGVLDGELDDFIDAEIRWRR 360 >gi|300174043|ref|YP_003773209.1| peptide chain release factor 2 [Leuconostoc gasicomitatum LMG 18811] gi|299888422|emb|CBL92390.1| Peptide chain release factor 2 [Leuconostoc gasicomitatum LMG 18811] Length = 372 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 148/354 (41%), Positives = 218/354 (61%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + D + + ++ + + W + ++A+ ++ E L N Sbjct: 12 NIQENIARFRATLDLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLN 71 Query: 62 IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + + + +L+E+ E+ D ++ E +++ + + ++E E LL+ D+N+A LE Sbjct: 72 LTSQAEEIDLLIEMLSEDVTDSEMMSELEESIVKAQKDIETYNLEQLLTEPYDANNAILE 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 VH G+GGTES DW L RMYTRWA++ F+ + L+ H G+EAGI SAT+ I G NA+G+ Sbjct: 132 VHPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGF 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E+GVHR VRISP+DS RRHTSF S+ V P +DD+I+IEI + D ++D +R+ GAGG Sbjct: 192 LRSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIDIEIRDDDVKMDVFRSGGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN + VR+TH PTG+VV ER+Q+ N+ A +L+ KLY+LEL+K+E Sbjct: 252 QNVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALT 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVL PYQMVKD RT+ E P VLDGDLD F+ A L + Sbjct: 312 GDKLENGWGSQIRSYVLHPYQMVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQ 365 >gi|291276501|ref|YP_003516273.1| peptide chain release factor 2 [Helicobacter mustelae 12198] gi|290963695|emb|CBG39527.1| peptide chain release factor 2 [Helicobacter mustelae 12198] Length = 365 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 166/352 (47%), Positives = 237/352 (67%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ + + D +RL + +DP+ W + A + +E+ ++ ++ + Sbjct: 13 LKTKVDSIHKIIKPDTLKERLCEIEKLQQDPNFWNDAKRAGEIGKEKSKIERMLATYQNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + D L E++ +D L+ Q ++ E++ + E +LSGE D +A + + Sbjct: 73 KNSIDDARELFEISA--NDTDTLELLFAESQNLEQEIKKVEIEVMLSGEHDGANAIVTIQ 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDW ++L RMY RW E+R FK E L+ DGEEAGIK L+KG NAYG++K Sbjct: 131 PGAGGTESQDWGSILYRMYLRWCERRGFKAEILDYQDGEEAGIKGVAFLVKGENAYGYMK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+D+N++RHTSF+S+ V P +DD+IEI+I E D RIDTYRASGAGGQH Sbjct: 191 TESGVHRLVRNSPFDANTKRHTSFASVQVSPELDDNIEIDIEEKDLRIDTYRASGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T+SA+RITH+PTG+VVQCQ +RSQHKNKA A ML++KLYELE +K+ +++ Sbjct: 251 INKTESAIRITHLPTGIVVQCQNDRSQHKNKASALKMLQSKLYELEREKQN--SSVATQE 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 309 KSEIGWGHQIRSYVLSPYQQVKDNRSNIAYSNVEAILDGDIDSIIEGVLISK 360 >gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5] gi|6225943|sp|O67695|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5] Length = 373 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 164/353 (46%), Positives = 248/353 (70%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L + + + L L+ K +P+ W++ +AK +++ R+ ++ ++ +K Sbjct: 12 ELRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEETLNKLKN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L+E+ EE D + ++ ++ + + ++ LSGE D+ +AYL + Sbjct: 72 LEKSVKDLEELVEITSEE-DTETWAMMDEEIKEVERTLRELELKTYLSGEMDAKNAYLTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTE+ DWA+ML RMY RWAEK+ ++ E ++I + AGIKS T+L+KGP AYG+L Sbjct: 131 QAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVKGPYAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N+RRHTSF+++ V P +D+ I+IEI D +I+T+RASGAGGQ Sbjct: 191 KGEQGVHRLVRISPFDANARRHTSFAAVSVMPQIDEDIKIEIKPEDLKIETFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN TD+AVRITHIPTG+ V CQQERSQ++NK +A +L+AKLY+LE++K EE E Sbjct: 251 YVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKLEEKKKQYEG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYV PY+++KDLRT E + V+DG++D+F+++ L K Sbjct: 311 EKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLKWK 363 >gi|300312096|ref|YP_003776188.1| peptide chain release factor 2 [Herbaspirillum seropedicae SmR1] gi|300074881|gb|ADJ64280.1| peptide chain release factor 2 (RF-2) protein [Herbaspirillum seropedicae SmR1] Length = 337 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 174/334 (52%), Positives = 240/334 (71%), Gaps = 1/334 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++L +N + EDP++W + A+ L +E++ L+ + + +I L D L E+A E Sbjct: 2 KSEKLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELTDARDLFEMARE 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + + + +K VE +F + SG D+N+ ++++ AGAGGTE+QDWA+MLL Sbjct: 62 EKDEDTIIAIEGDAENLKKMVEEMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 R Y R+ E++ FK E LE DGE AGIK+AT+ ++G AYG+L+ E GVHRLVR SP+DS Sbjct: 122 RQYLRYCERKGFKAEILEQSDGEVAGIKTATIKVEGEYAYGFLRTETGVHRLVRKSPFDS 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 ++ RHTSFSS++VYP VD+S EIEI+ +D R+DTYRASGAGGQH+N TDSAVR+TH P+G Sbjct: 182 SNGRHTSFSSLFVYPEVDESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VVQCQ +RSQH+N+A+AW+MLRAKL+ELEL+KR E SKT++GWG QIRSYVL Sbjct: 242 IVVQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVL- 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KDLRTN E + VLDGD+DDF+ A+L Sbjct: 301 DQSRIKDLRTNFETGNTKAVLDGDIDDFIAASLK 334 >gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense SS-5] Length = 369 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 176/353 (49%), Positives = 240/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L + + + + L+ DP+ W + +A+ + R +L + I Sbjct: 12 EIKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +++ + L + L E+D + E L+ I+ E+ + SLLS E DS +A L V Sbjct: 72 VDEKINNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTV 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GG E+ DW MLLRMYTRWAEKR ++ E ++ + AG+KSAT++IKGP AYG+L Sbjct: 132 QAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATVIIKGPYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N RRHTSFS++ V P +D+ I++EI+E D RIDTYRA GAGGQ Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIDEDIKVEINEEDLRIDTYRAGGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LEL+KR+E E Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKAMNMLKAKLYQLELEKRKEKQKELEG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPYQMVKDLRT E + V+DG++DDF+++ L K Sbjct: 312 EKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364 >gi|210620542|ref|ZP_03292090.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275] gi|210155256|gb|EEA86262.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275] Length = 349 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 168/344 (48%), Positives = 240/344 (69%), Gaps = 1/344 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + +++ E W++ A +++E + L + +++Q L D +L Sbjct: 3 LFDIERLKEKIIENEQDMERQDFWEDNENAHKVLQENKKLCETVEKFEQLQKNLEDIEVL 62 Query: 73 LELALEEDD-CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +EL LEEDD I +E SD++ ++K ++ ++LLSGE D N+A + ++AG GG ++Q Sbjct: 63 IELGLEEDDSEDIEKEVSDSINQLKDVIDEMTIQTLLSGEYDKNNAIVSINAGTGGLDAQ 122 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RWAE R +K + L++ EAGIK+A +LI+G NAYG+LKGE+GVHR+V Sbjct: 123 DWAQMLLRMYIRWAEGRDYKVKLLDLISDPEAGIKTAVMLIQGDNAYGYLKGEKGVHRIV 182 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+D + +RHTSF+S+ V P +D++IE+EI++SD +IDTYRASGAGGQHVNTTDSAVR Sbjct: 183 RISPFDPSGKRHTSFASVDVIPELDENIEVEINQSDLKIDTYRASGAGGQHVNTTDSAVR 242 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PTG+ VQCQ ERSQH N+ A ML AKL +++ +++E + T+I WG Q Sbjct: 243 ITHLPTGITVQCQNERSQHLNREVAMRMLMAKLIDIKEMEQKEKIEDLQGKYTQITWGSQ 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IRSYV QPY+MVKD RTN E + V++G++D F+ + L KK Sbjct: 303 IRSYVFQPYKMVKDHRTNTETGNVDAVMNGNIDIFINSYLTRKK 346 >gi|332307386|ref|YP_004435237.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174715|gb|AEE23969.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 365 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 183/349 (52%), Positives = 238/349 (68%), Gaps = 1/349 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ L G D+D +RL +N + E P +W A+ L +E+ L+ + I ++ Sbjct: 15 KQRSTSLRGYLDYDQKSERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLE 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D LLELA+EE D E +L + ++E +F + SG D+ND Y+++ + Sbjct: 75 QGCVDVEELLELAVEESDQDTFDEAEKDLAELVAKLETLEFRRMFSGPNDANDGYIDIQS 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+MLLRMY RW E FKTE +E+ DG+ AGIKSAT+ +G A+GWL+ Sbjct: 135 GSGGTEAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRT 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS SRRHTSF+S++ YP +DD IEI+I SD RIDTYRASGAGGQHV Sbjct: 195 ETGVHRLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVRITH PT +VVQCQ +RSQHKNKAQA L+AKLYE E+QK+ E E SK Sbjct: 255 NRTDSAVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQNMEDSK 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 ++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 315 SDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIQASLK 362 >gi|192358804|ref|YP_001982940.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107] gi|190684969|gb|ACE82647.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107] Length = 329 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 168/328 (51%), Positives = 228/328 (69%), Gaps = 1/328 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + + + +W N A+ L RER L+ + I+ + + D LL++A+EE+D S++ Sbjct: 1 MELELAESSVWDNPERAQALGRERSSLEIVVKTIESLDSGVADCGELLDMAVEENDESMV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + + R++ E+ +F + SGE D N+AYL++ +G+GGTE+QDWA M+LRMY RW Sbjct: 61 ADVQAEIDRLEKELGVLEFRRMFSGETDPNNAYLDIQSGSGGTEAQDWAEMVLRMYLRWG 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E + FK E GE AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHTS Sbjct: 121 EAKGFKVTLEECSAGEVAGIKSATIYFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F S++V P +DD+IEIEI+ +D RIDTYRASGAGGQHVN TDSA+RITHIP+G+VVQCQ Sbjct: 181 FCSVFVSPEIDDNIEIEINPADLRIDTYRASGAGGQHVNKTDSAIRITHIPSGIVVQCQN 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH N+ +A+ MLRA++YE E+ KR E SK++IGWG QIRSYVL VKD Sbjct: 241 ERSQHANRDKAYKMLRARMYEQEMLKRNAEKQAMEDSKSDIGWGSQIRSYVLDDS-RVKD 299 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353 LRT ++ ++ VLDGDLD F+ +L Sbjct: 300 LRTGVQTSNTQAVLDGDLDQFIVESLKA 327 >gi|238923127|ref|YP_002936640.1| peptide chain release factor 2 in translation [Eubacterium rectale ATCC 33656] gi|238874799|gb|ACR74506.1| peptide chain release factor 2 in translation [Eubacterium rectale ATCC 33656] Length = 330 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 218/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + +++ M+E + + + ++ +++++ D ++E+ EE+D S++ E Sbjct: 1 MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + ++LLSGE D +A L ++AGAGGTES DWA+ML RMY++WA+K+ Sbjct: 61 QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKLY L+ ++ EIGWG QIRSYVLQPY MVKD RT+ Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDG++D F+ L Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324 >gi|239618275|ref|YP_002941597.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1] gi|259585228|sp|C5CGS4|RF2_KOSOT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|239507106|gb|ACR80593.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1] Length = 370 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 174/347 (50%), Positives = 233/347 (67%), Gaps = 2/347 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D D ++LS + + DP +W + A L ++ Q L + + + + Sbjct: 12 ELRDKFENIKTTVDVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALRSQLDLLNK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q+ + I +EL+ E+D S L+ ++ L+ + V+ + LLS D+ +AYL V Sbjct: 72 VQELFENIDIAVELS--EEDESYLENLNELLKEAEDMVKEFELNILLSSPYDAYNAYLSV 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMY RWAE+ +K +E GEEAGIKSAT+ I GP AYG L Sbjct: 130 HPGAGGTESQDWASMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATINIAGPYAYGKL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+N RRHTSF+S+ V+P +DD +EI+I D +IDTYRA GAGGQ Sbjct: 190 KYEAGVHRLVRISPFDANHRRHTSFASVSVFPEMDDDVEIDIRPEDLKIDTYRAGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VV CQ ERSQH+NKA A +L+AKL+ELEL+K+ + Sbjct: 250 HVNRTESAVRITHIPTGIVVTCQNERSQHQNKATAMKILKAKLFELELEKKRQEKMKLMG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + +I WG QIRSYV QPY MVKD RTN E V+DG +DDF++ Sbjct: 310 EQKDIAWGNQIRSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIE 356 >gi|291523975|emb|CBK89562.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium rectale DSM 17629] Length = 330 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 217/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + +++ M+E + + + ++ +++++ D ++E+ EE+D S++ E Sbjct: 1 MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + ++LLSGE D +A L ++AGAGGTES DWA ML RMY++WA+K+ Sbjct: 61 QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWAAMLFRMYSKWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKLY L+ ++ EIGWG QIRSYVLQPY MVKD RT+ Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDG++D F+ L Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324 >gi|229175857|ref|ZP_04303355.1| Peptide chain release factor 2 [Bacillus cereus MM3] gi|228607590|gb|EEK64914.1| Peptide chain release factor 2 [Bacillus cereus MM3] Length = 325 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 164/321 (51%), Positives = 214/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + +++ + + I EL EE D + +E ++ Sbjct: 4 GFWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 64 GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIEI D ++DTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 184 EFNDEVEIEIRSEDLKVDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 243 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324 >gi|282903384|ref|ZP_06311275.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C160] gi|282596339|gb|EFC01300.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C160] Length = 331 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDVGPFIESYLR 325 >gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1] gi|229576671|sp|B2V5M0|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1] Length = 369 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 178/353 (50%), Positives = 240/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L + + + + L+ DP+ W + +A+ + R +L + I Sbjct: 12 EIKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + ++ + L + L E+D + E L+ I+ E+ + SLLS E DS +A L V Sbjct: 72 VDKKVNNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTV 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GG E+ DW MLLRMYTRWAEKR ++ E ++ + AG+KSATL+IKGP AYG+L Sbjct: 132 QAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATLIIKGPYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N RRHTSFS++ V P +D+ I++EI+E D RIDTYRASGAGGQ Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIDEDIKVEINEEDLRIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LEL+KR+E E Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKATNMLKAKLYQLELEKRKEKQKELEG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPYQMVKDLRT E + V+DG++DDF+++ L K Sbjct: 312 EKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364 >gi|239636633|ref|ZP_04677635.1| peptide chain release factor 2 [Staphylococcus warneri L37603] gi|239597988|gb|EEQ80483.1| peptide chain release factor 2 [Staphylococcus warneri L37603] Length = 330 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 220/325 (67%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W + A+ ++ + L + ++ E+++ + D +EL EE D + QE Sbjct: 1 MMTEPNFWDDQNRAQDIIDKNNALKSMVNGYYELEESVEDMSATVELLQEEFDEDMKQEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +N+ K E+++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ Sbjct: 61 ENNVVEFKAEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQS 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++E + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 TN E V+DGD+ F++A L Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLR 325 >gi|307265609|ref|ZP_07547163.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919407|gb|EFN49627.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1] Length = 330 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 223/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W ++ +++ L ++++ L + + + D L+EL LEE D SI E Sbjct: 1 MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLEEGDESITDEVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + Sbjct: 61 KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E ++ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 FEVETIDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E+ + + V+DG++D F+ A L K Sbjct: 301 YEEGNVNAVMDGEIDGFINAYLKQK 325 >gi|284023776|ref|ZP_06378174.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 132] Length = 331 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDIRPFIESYLR 325 >gi|147732321|sp|Q68X96|RF2_RICTY RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 369 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 243/352 (69%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + L + D ++ RL+ L T DP LW N A++L+RE+ +++ ++ Sbjct: 11 NIEQSLELIWRSLDIESLTIRLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNN 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D L L +A E+D L + + +++ + + E L S E+D N+ +LE+ Sbjct: 71 LKSNFEDILELEAMAEVENDFETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKT+ + + +GEE GIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQ Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPT V QCQ +RSQHKNKAQA ML+AKLY+LE+QKR + + + Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPYQ+VKDLRT+ E + VLDG+L++F+ A+LA+ Sbjct: 311 NKTDNSWGHQIRSYVLQPYQIVKDLRTDYETSDTKGVLDGNLENFVSASLAM 362 >gi|282891215|ref|ZP_06299718.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498908|gb|EFB41224.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 341 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 157/335 (46%), Positives = 220/335 (65%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + ++ L T+ E P W + A+ ++ E L ++++R + LL+ A Sbjct: 3 SKEAKVKALETEMEAPTFWDDNDAAQKVIAECNALKAWTIPYHDLKERYSNVSELLQEAF 62 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 + + S++QE + L I+ ++ + +L+GE DS +A+L ++AGAGGTE+ DW ML Sbjct: 63 DLGEESLIQELVEELDSIEASLKELEIRKMLAGELDSKNAFLSINAGAGGTEACDWVLML 122 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWA K+ +K E ++ DG+ AGIKS T GP AYG+ K E+GVHRLVRISP+D Sbjct: 123 SRMYQRWAAKKNWKVEVIDTVDGDVAGIKSITYKFTGPFAYGYAKAEKGVHRLVRISPFD 182 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 SN++RHTSF+S+ + P + D I+IEI D R+DT+RASGAGGQHVN TDSAVR+TH+PT Sbjct: 183 SNAKRHTSFASVDITPEITDDIQIEIRPEDLRVDTFRASGAGGQHVNRTDSAVRLTHLPT 242 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VV CQ +RSQ +NK + MLR+KLYE+E+ RE K EI WG QIR+YV Sbjct: 243 GIVVSCQAQRSQLQNKETCYKMLRSKLYEMEVTARENALKAMGGEKKEIAWGSQIRNYVF 302 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QPY +VKD RT +E + V+DG+LDDF+ A L Sbjct: 303 QPYTLVKDTRTKVECGNIQAVMDGELDDFVNAYLM 337 >gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563] gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563] Length = 353 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 164/346 (47%), Positives = 219/346 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GGLFD + L+ P W + +A+ ++ L + D Sbjct: 1 MTASGGLFDLEKMEADLAEYEADMVQPGFWDDSEKAQSVIDANNALKKVYDEFNNLADEY 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + +L E+ EE D + +E + +Q + ++ + LLSGE D NDA LE+H GAG Sbjct: 61 EELTLLNEMVKEEPDPDLSKELVNRIQAFQAKISAYERNILLSGEYDHNDALLEIHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA+MLLRMY RWA++ ++ L+ +G+EAGIKS TL IKG NAYG+LK E G Sbjct: 121 GTESQDWASMLLRMYQRWADQHDYQVTTLDFQNGDEAGIKSVTLEIKGLNAYGFLKSEDG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+DSN RRHTSF+S+ + PV+D + EIEI ESD +D +RASGAGGQH+N T Sbjct: 181 IHRLVRISPFDSNKRRHTSFASVEIMPVLDQNTEIEIDESDIEMDVFRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q +RSQ +N+ A ML+AKL L +K + + K+EI Sbjct: 241 SSAVRLTHVPTGIVVASQGQRSQFQNRDTAMKMLQAKLAHLLAEKNAKELDEIRGEKSEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L Sbjct: 301 AWGSQIRSYVFHPYNMVKDHRTDYETANVQGVMDGDLDGFIDAYLK 346 >gi|311739769|ref|ZP_07713603.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium ATCC 33035] gi|311304842|gb|EFQ80911.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium ATCC 33035] Length = 367 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 219/353 (62%), Gaps = 4/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 11 QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQQVTSELSAAQAKVRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE D S+ D L ++ +E + ++LSGE D +A + + Sbjct: 71 LRVRLEDMPVMYELAEEEGDTSL---ADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I ++D R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E+ Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEEQAELDALG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F+++ + + Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWR 359 >gi|152977397|ref|YP_001376914.1| peptide chain release factor 2 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026149|gb|ABS23919.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98] Length = 327 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 163/325 (50%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + W + A+ ++ E L + + +++ + + + EL EE D + +E Sbjct: 1 MMEAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDKDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKSLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D ++DTYRASGAGGQHVNTTDSAVRITHIPT +V CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKVDTYRASGAGGQHVNTTDSAVRITHIPTNTIVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|168215798|ref|ZP_02641423.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239] gi|182382266|gb|EDT79745.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239] Length = 323 Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats. Identities = 154/322 (47%), Positives = 218/322 (67%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D QE Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAQEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ + V+DGD+D+F+ A L Sbjct: 300 FETSNVNGVMDGDIDNFIIAYL 321 >gi|229164123|ref|ZP_04292059.1| Peptide chain release factor 2 [Bacillus cereus R309803] gi|228619359|gb|EEK76249.1| Peptide chain release factor 2 [Bacillus cereus R309803] Length = 326 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 165/321 (51%), Positives = 215/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A++++ E L + +++ + + I EL EE D + +E ++ Sbjct: 5 GFWDDQQGAQVVINEANALKEMVGKFRKLDETFENLEITHELLKEEYDEDLHEELEAEVK 64 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 65 GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIEI D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 EFNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 244 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325 >gi|205375066|ref|ZP_03227857.1| hypothetical protein Bcoam_18782 [Bacillus coahuilensis m4-4] Length = 327 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ L+ E L + + + + + + EL EE D +L E Sbjct: 1 MVDPDFWNDQQKAQGLINEANGLKDMVGQYHSMVEAHENLEVTFELVKEEGDEELLAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + ++ + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ Sbjct: 61 PELNDLTKQLNNYELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VV CQ ERSQ Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+++++E + +IGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNREAAMKMLKSKLYQLKIEEQEAQLAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + + V+DGDLD F+ A L + Sbjct: 301 TEVGNTNSVMDGDLDVFIDAYLRSR 325 >gi|288554120|ref|YP_003426055.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4] gi|288545280|gb|ADC49163.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4] Length = 328 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 166/323 (51%), Positives = 222/323 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E L ++ E++++ + + EL EE D + +E Sbjct: 1 MTAPDFWDDQEAAQTVINESNGLKEQVNVFLELEEKYENLEVSYELVKEEADEELEKELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + + + + LLS D N+A LE+H GAGGTESQDWA+MLLRMYTRW+E+R Sbjct: 61 AGVKELISRLNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWSEQRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI+I D ++DTYRASGAGGQH+NTTDSA+RITH+PT VV CQ ERSQ Sbjct: 181 EVMPELDDNVEIDIRTEDLKVDTYRASGAGGQHINTTDSAIRITHLPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNRDQAMKMLKAKLYQLEIEKQQQELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + + V+DGDLD F+ A L Sbjct: 301 FEIGNTNAVMDGDLDGFINAYLR 323 >gi|160893549|ref|ZP_02074333.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50] gi|156864534|gb|EDO57965.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50] Length = 329 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 163/324 (50%), Positives = 222/324 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W +V ++ + R+ + L +++ ++++ D L+++A EE D S+++E Sbjct: 1 MEQPGFWDDVAKSTSVSRQLKKLQDSLEEYQKLEQDFSDIETLIQMAEEEGDSSMIEEIG 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + E E + LLSGE D DA + +HAGAGGTES DW +ML RMYTRWAEK Sbjct: 61 EMLTAFQKEFENYRISLLLSGEFDGYDAVMTLHAGAGGTESCDWTSMLYRMYTRWAEKHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ +G+EAGIKS T+ I G NAYG+LK E+GVHRLVRISP+++ +R TSF+S Sbjct: 121 FKVEVLDYLEGDEAGIKSVTIQISGQNAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ +E++I+E D RIDTYR+SGAGGQH+N T SAVRITHIPTG+VVQCQ ERSQ Sbjct: 181 DVIPEIEEDLEVDINEDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML++KLY ++ Q+ + + E G+G QIRSYV+QPY MVKD RT Sbjct: 241 HMNKDKAMQMLKSKLYLIKKQENLDKISDIRGEILENGFGSQIRSYVMQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + VLDG+LD FM A L Sbjct: 301 EESGNVAAVLDGELDGFMNAYLKW 324 >gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2 155] gi|166225108|sp|A0QU58|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2 155] Length = 368 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 157/352 (44%), Positives = 216/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L DP+LW + A+ + + H N + ++ + Sbjct: 12 LDTTLTTVERVLDVDGLRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQNELRRVEGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA E + E L +++ ++E + +LLSGE D +A + + Sbjct: 72 RQRLDDLPVLYELAAEAGGPDEVAEADAELAKLREDIEAMEVRTLLSGEYDEREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK + E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHAPFAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + IEI E+D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIEIPENDIRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E + + + + Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAELDALKGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 312 GGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPASVLDGDIDGFLEAGIRWR 362 >gi|317057134|ref|YP_004105601.1| peptide chain release factor 2 [Ruminococcus albus 7] gi|315449403|gb|ADU22967.1| peptide chain release factor 2 [Ruminococcus albus 7] Length = 378 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 152/350 (43%), Positives = 231/350 (66%), Gaps = 3/350 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L ++D +NA +++ L+ K +P W + ++++++++ ++L+ + + Sbjct: 20 IRELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAA 79 Query: 67 CDNLILLELALEEDD---CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +++E+A EED+ +++E L ++K +++ E+LL+GE D ++A L HA Sbjct: 80 DDIEVMIEMAAEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHA 139 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDW ML+RMYT+WA+ F + ++I +G +AGIKS ++ I+G NAYG+LK Sbjct: 140 GAGGTEAQDWTEMLIRMYTKWADSHGFSAKIMDILEGGDAGIKSCSMFIEGENAYGYLKS 199 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRLVRISP+DS+ RHTSFS++ V P +DD+IE+EI D ++ YRASGAGGQH+ Sbjct: 200 ESGIHRLVRISPFDSSGSRHTSFSAVEVMPELDDTIEVEIRPEDIEMEVYRASGAGGQHI 259 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+ H PTG+V CQ +RSQ +NK A ML+AKL E++ ++ E + + Sbjct: 260 NKTSSAVRLIHKPTGIVTACQTQRSQFQNKDYAMKMLKAKLIEIKEREHLEKIEDIKGVQ 319 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EI WG QIRSYV PY +VKDLRT E + V+DGDLD F+ A L Sbjct: 320 KEIAWGSQIRSYVFMPYTLVKDLRTGFEYNNVKAVMDGDLDGFINAYLKA 369 >gi|168213727|ref|ZP_02639352.1| peptide chain release factor 2 [Clostridium perfringens CPE str. F4969] gi|170714817|gb|EDT26999.1| peptide chain release factor 2 [Clostridium perfringens CPE str. F4969] Length = 323 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 153/322 (47%), Positives = 220/322 (68%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D +E Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ Sbjct: 60 NEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E ++ + V+DGD+D+F+ A L Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321 >gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX] gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida fusca YX] Length = 375 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 158/354 (44%), Positives = 221/354 (62%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ L + + D D + L ++ DP LW + A+ + R L++ +S ++ Sbjct: 12 ELTSTLENIEAVLDLDAKRTEIEQLREQSADPELWNDQANAQKVTRRLSFLESEVSKVEN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ R+ D +L ELA E+D L E L ++ ++ + +LLSG D +A + + Sbjct: 72 IRSRIDDLGVLFELAAAENDAETLAEARRELAALRKDISDLEVRTLLSGPYDEREALISI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +A AGG ++ DW ML RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 132 NAQAGGVDAADWTQMLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGML 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GE G HRLVRISP+D+ SRR TSF+ + V PVV+ S IEI ES+ RID YR+SG GGQ Sbjct: 192 RGEHGTHRLVRISPFDNQSRRQTSFAGVDVVPVVEQSDHIEIDESELRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A ++L+AKL E + Q+ E Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMSILQAKLLERKRQEEEAELAALRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+R+YVL PYQ VKD+RT +E + S VLDG++D+F+ A + + Sbjct: 312 ESAR-AWGTQMRNYVLHPYQSVKDIRTGVETGNTSAVLDGEIDEFINAGIRWLR 364 >gi|83589099|ref|YP_429108.1| peptide chain release factor 2 [Moorella thermoacetica ATCC 39073] gi|83572013|gb|ABC18565.1| bacterial peptide chain release factor 2 (bRF-2) [Moorella thermoacetica ATCC 39073] Length = 330 Score = 361 bits (928), Expect = 6e-98, Method: Composition-based stats. Identities = 157/326 (48%), Positives = 222/326 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W++ A+ + + +L ++ +E++ + D L +LAL EDD S+ +E + Sbjct: 1 MLAPGFWEDRARAEAVGKRLTYLKEKLARYRELESKCADVRELWQLALAEDDHSLEEEIA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L ++ +VE + +LL+G D ++A L +H GAGGTESQDWA MLLRMY RW E R Sbjct: 61 RDLAAVEGKVEGQLLATLLNGPYDRHNAILSLHPGAGGTESQDWAAMLLRMYNRWCEDRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ +GEEAG+KSAT+L+KG NAYG+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 YQVELLDYLEGEEAGLKSATILVKGENAYGYLQAEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P V+ E+EI+ D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 DVIPEVEADEEVEINPDDLKIDTFRSQGAGGQHVNKTDSAVRITHLPTGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H N+ A +L+A+L L+ Q++E + EI WG QIRSYV PY +VKD RT Sbjct: 241 HANRLSAMKILQARLAALKRQEQEAELAQIRGEQREIAWGSQIRSYVFHPYSLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 +E + V+DG +D F++A L ++ Sbjct: 301 VETGNIQAVMDGQIDPFIQAYLHWQR 326 >gi|312884019|ref|ZP_07743736.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368477|gb|EFP96012.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC BAA-2122] Length = 332 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 173/329 (52%), Positives = 232/329 (70%), Gaps = 1/329 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 +N + E P +W A+ L +ER L+ + I ++ + D LLELA+EE+D Sbjct: 2 EEVNAELEQPDVWNEPERAQALGKERSSLEAVVETIDQLNQGVEDVEGLLELAVEEEDQE 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E L ++ ++E +F + SG+ DS+D Y+++ +G+GGTE+QDW +MLLRMY R Sbjct: 62 TFDEIEPELIELEFKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE + FKTE +E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRH Sbjct: 122 WAEAKGFKTEVIEVSEGEVAGLKGATIKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S ++YP +DD+I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQC Sbjct: 182 TSFASAFIYPEIDDNIQIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA LRAKL+ELE+QK+ E +K++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KDLRT IE + VLDGDLD F++A+L Sbjct: 301 KDLRTGIENRNTQAVLDGDLDKFIEASLK 329 >gi|323441389|gb|EGA99047.1| peptide chain release factor 2 [Staphylococcus aureus O46] Length = 331 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 158/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F+ E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFEVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLR 325 >gi|15965084|ref|NP_385437.1| peptide chain release factor 2 [Sinorhizobium meliloti 1021] gi|307315054|ref|ZP_07594639.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C] gi|307317885|ref|ZP_07597323.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83] gi|15074263|emb|CAC45910.1| Probable peptide chain release factor 2 (RF-2) protein [Sinorhizobium meliloti 1021] gi|306896647|gb|EFN27395.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83] gi|306898893|gb|EFN29543.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C] Length = 342 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 231/329 (70%), Positives = 281/329 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP LW + EA+ LMRERQ LD+ I+ ++ + +L DN+ L+EL EE D +I+ Sbjct: 1 MNNKAEDPSLWNDAAEAQKLMRERQQLDDGINGLRRFEQQLNDNIELIELGEEEGDSAIV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L++++ E KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 AEAEEALRQLRGEAAKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVD+SI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ Sbjct: 181 FSSIWVYPVVDESIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA+LYE EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT +E +SP DVLDG+L++FM+A LA + Sbjct: 301 LRTGVESSSPGDVLDGELNEFMEAALAHR 329 >gi|310644311|ref|YP_003949070.1| protein chain release factor b-like protein [Paenibacillus polymyxa SC2] gi|309249262|gb|ADO58829.1| Protein chain release factor B-like protein [Paenibacillus polymyxa SC2] Length = 339 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 164/332 (49%), Positives = 230/332 (69%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ K P W + +A+ ++ E + +++ ++++ D +++ELA EE D Sbjct: 2 IANFEEKMAAPDFWDDNEKAQGVIAEMNVVKSSVDSYEQLRQEYEDAGMMVELAEEEGDE 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +++ E ++++ + ++E + + LL+ D +A LE+H GAGGTESQDW MLLRMYT Sbjct: 62 ALVGEVENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYT 121 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RW EKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR Sbjct: 122 RWGEKRGFKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF S V P + D ++IEI D +IDTYRASGAGGQH+NTTDSAVRITH+PTG+VV Sbjct: 182 HTSFVSCDVVPEIADDVDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIVVT 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQ KN+ +A MLR+KLYE +++++++ + +++I WG QIRSYV PY M Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQSDIAWGSQIRSYVFHPYSM 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKD RT++E + V+DGDLD F+ L + Sbjct: 302 VKDHRTSVETGNVGAVMDGDLDPFIDGYLRSQ 333 >gi|282905164|ref|ZP_06313021.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282331571|gb|EFB61083.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Btn1260] Length = 331 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 158/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE + + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFEGEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLR 325 >gi|262283020|ref|ZP_06060787.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus sp. 2_1_36FAA] gi|262261272|gb|EEY79971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus sp. 2_1_36FAA] Length = 347 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 160/344 (46%), Positives = 221/344 (64%), Gaps = 2/344 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GGLFD + + ++ L K +P W + I A+ +E L ++ D ++ Sbjct: 4 GGLFDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESE 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ILL+ E D S+ +E + L ++ + + LLS D+N+A LE+H G+GGTE+ Sbjct: 64 ILLDFLAE--DDSVQEELEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEA 121 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW +MLLRMYTR+ + FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRL Sbjct: 122 QDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRL 181 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + V Sbjct: 182 VRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGV 241 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VVQ +R+Q+ N+ +A ML+AKLY+LE +K+ + + K EI WG Sbjct: 242 RLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGS 301 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV PY MVKD RT+ E V+DGDLD F+ A L + Sbjct: 302 QIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 345 >gi|194468150|ref|ZP_03074136.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23] gi|194453003|gb|EDX41901.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23] Length = 332 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 211/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E L ++D++ D +EL E D + ++ Sbjct: 1 MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSIELLTVEPDDDLQRDFE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + +E + LL GE D+ +A LE+H GAGGTE+QDW MLLRMY RW E+ Sbjct: 61 VSFTKTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS+E++I SD R+DT+R+SGAGGQH+N +SAVRITHIPTG+V Q ERSQ Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKIESAVRITHIPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + +IGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325 >gi|168205594|ref|ZP_02631599.1| peptide chain release factor 2 [Clostridium perfringens E str. JGS1987] gi|169344216|ref|ZP_02865198.1| peptide chain release factor 2 [Clostridium perfringens C str. JGS1495] gi|169297675|gb|EDS79775.1| peptide chain release factor 2 [Clostridium perfringens C str. JGS1495] gi|170662903|gb|EDT15586.1| peptide chain release factor 2 [Clostridium perfringens E str. JGS1987] Length = 323 Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats. Identities = 153/322 (47%), Positives = 219/322 (68%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D +E Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E ++ + V+DGD+D+F+ A L Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321 >gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae KM-6054] Length = 351 Score = 361 bits (927), Expect = 8e-98, Method: Composition-based stats. Identities = 162/349 (46%), Positives = 218/349 (62%), Gaps = 2/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ + + D D ++ L + P LW +V A+ + L + ++ ++ R+ Sbjct: 1 MSSIEAVLDLDKIRADIATLEEEAAAPTLWDDVANAQKVTSRLSFLQGELRKVETLRGRV 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L ELA EDD E L ++ VE + +LLSGE D+ +A + + A AG Sbjct: 61 EDLGVLFELAEAEDDADTRTEAEAELVSVQKAVEELEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L+RMY RWAE+ + TE + EEAGIKSAT +K P AYG L EQG Sbjct: 121 GVDAADFAEQLMRMYLRWAERHGYPTEVYDTSYAEEAGIKSATFTVKSPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ S ++I E D RID YRASG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVDIDEGDLRIDVYRASGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + Sbjct: 241 DSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEERAAMDALKDGGS 298 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDGD+D F++A + +K Sbjct: 299 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPQGVLDGDIDGFIEAGIRWRK 347 >gi|320540119|ref|ZP_08039774.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson] gi|320029785|gb|EFW11809.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson] Length = 325 Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats. Identities = 174/324 (53%), Positives = 228/324 (70%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P +W A+ L +ER L+ ++ I ++ D LLELA+E +D E Sbjct: 1 MEQPDVWNEPERAQALGKERAALEAIVATIDQLAQGGEDVNGLLELAVEAEDEETFNEAV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ +++E +F + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + Sbjct: 61 IELDQLMVKLERLEFCRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE +E DG+ A +KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS+ Sbjct: 121 FKTEVIEESDGDVARLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 ++YP VDD I++EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQ Sbjct: 181 FIYPEVDDDIDMEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK QA+ LRAKLY+ E+QK+ E +K++IGWG QIRSYVL +KDLRTN Sbjct: 241 HKNKDQAFKQLRAKLYDFEMQKKNADKQTMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDGDLD F++A+L Sbjct: 300 VETRNTQAVLDGDLDKFIEASLKA 323 >gi|312199813|ref|YP_004019874.1| peptide chain release factor 2 [Frankia sp. EuI1c] gi|311231149|gb|ADP84004.1| peptide chain release factor 2 [Frankia sp. EuI1c] Length = 367 Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats. Identities = 152/354 (42%), Positives = 223/354 (62%), Gaps = 4/354 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L L + + D + +R + L + DP LW + A+++ R+ + IS ++ Sbjct: 11 NLDSTLTGIETVLDVEGLRRRAADLEQEASDPDLWSDQDRAQVVTRKLSSVRGDISRVEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++DRL + + EL +D ++ E + L + ++ + +LLSGE D DA +++ Sbjct: 71 LRDRLDNIMTAFEL----EDDDLISEATGQLPTLARDISTLEVRTLLSGEYDERDAIVQL 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT L+K P AYG L Sbjct: 127 SAGAGGVDAADWTAMLLRMYLRWAERHGYSTEVYDSSEAEEAGLKSATFLVKAPYAYGTL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP+D+ +RR TSF+ + + PVV+ S ++I + D R+D +R+SG GGQ Sbjct: 187 RSEHGVHRLVRISPFDNQNRRQTSFAGVEITPVVELSDHVDIDDKDLRVDIFRSSGPGGQ 246 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 247 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMVVLQAKLLERRRAEEAAEKQRLTG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++ +G QIR+YVL PYQMVKDLRT +E ++ VLDG++DDF+ A + ++ Sbjct: 307 GPQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTGGVLDGEIDDFIDAEVRWRR 360 >gi|65317159|ref|ZP_00390118.1| COG1186: Protein chain release factor B [Bacillus anthracis str. A2012] Length = 325 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 165/321 (51%), Positives = 214/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 4 GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 64 GLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 184 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324 >gi|108759158|ref|YP_632896.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622] gi|108463038|gb|ABF88223.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622] Length = 373 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 156/349 (44%), Positives = 229/349 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D D R++ + + P W + +A+ L++E+ L+ ++ ++ Sbjct: 12 LRERVLALRGHLDLDRKRSRIALIERDSTLPTFWDDNTKAQALLKEKSTLEASVGAYDKV 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +L ELA+E +D + QE +L ++ +V + +LSGE D + +++++ Sbjct: 72 MRGLDDAQVLFELAVEANDEATTQEAEGSLTGLEGDVAKLELARMLSGEQDRSSCFMDIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGT+S DWA MLLRMYTR+ E + +K E + GEEAG K+ +L I+G AYG+LK Sbjct: 132 AGAGGTDSMDWAAMLLRMYTRYCENKGWKVEINDEVPGEEAGFKNVSLRIEGDFAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N+RR T+F+S+ VYP VDD+I+I+I E D + R GAGGQ Sbjct: 192 AEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDTIQIDIPEKDIDLKFIRGGGAGGQK 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T S ++ H+PTG+++ CQ ERSQ NK A+ +LR +LYELE++KRE + E+ Sbjct: 252 VNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKILRGRLYELEMKKREAARDAAEAQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I +G QIRSYVL PY+MVKDLRT IE + VLDGDL++F+ + L Sbjct: 312 KKDISFGSQIRSYVLAPYRMVKDLRTGIETGNVDAVLDGDLEEFVTSQL 360 >gi|314933063|ref|ZP_07840429.1| peptide chain release factor 2 [Staphylococcus caprae C87] gi|313654382|gb|EFS18138.1| peptide chain release factor 2 [Staphylococcus caprae C87] Length = 333 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 155/327 (47%), Positives = 216/327 (66%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 DP W + +A+ ++ + L + ++ +++ + + D EL EE D + +E Sbjct: 1 MMADPDFWNDQSKAQEIIDKNNALKSIVNGYRDLANEVDDMSATRELLQEEYDEDMKEEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ + K +++ + + LL G D+N+A E+H GAGGTESQDWA+MLLRMY R+ E+ Sbjct: 61 ESDVIQFKDKMDQFELQLLLDGPHDANNAIFELHPGAGGTESQDWASMLLRMYQRYCEQN 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFNVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+ +L ++E + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQQKLDEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E V+DGD+ F++A L + Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRKE 327 >gi|227552028|ref|ZP_03982077.1| peptide chain release factor 2 [Enterococcus faecium TX1330] gi|257879881|ref|ZP_05659534.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933] gi|257882725|ref|ZP_05662378.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502] gi|257884039|ref|ZP_05663692.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501] gi|257890396|ref|ZP_05670049.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410] gi|257895380|ref|ZP_05675033.1| peptide chain release factor 2 [Enterococcus faecium Com12] gi|257897991|ref|ZP_05677644.1| peptide chain release factor 2 [Enterococcus faecium Com15] gi|260559609|ref|ZP_05831789.1| peptide chain release factor 2 [Enterococcus faecium C68] gi|261208674|ref|ZP_05923111.1| peptide chain release factor 2 [Enterococcus faecium TC 6] gi|289566068|ref|ZP_06446505.1| peptide chain release factor 2 [Enterococcus faecium D344SRF] gi|293378249|ref|ZP_06624418.1| peptide chain release factor 2 [Enterococcus faecium PC4.1] gi|293556398|ref|ZP_06674979.1| peptide chain release factor 2 [Enterococcus faecium E1039] gi|293560376|ref|ZP_06676869.1| peptide chain release factor 2 [Enterococcus faecium E1162] gi|293568705|ref|ZP_06680020.1| peptide chain release factor 2 [Enterococcus faecium E1071] gi|293572408|ref|ZP_06683388.1| peptide chain release factor 2 [Enterococcus faecium E980] gi|294616268|ref|ZP_06696061.1| peptide chain release factor 2 [Enterococcus faecium E1636] gi|294617600|ref|ZP_06697230.1| peptide chain release factor 2 [Enterococcus faecium E1679] gi|294622340|ref|ZP_06701373.1| peptide chain release factor 2 [Enterococcus faecium U0317] gi|314939593|ref|ZP_07846820.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04] gi|314941219|ref|ZP_07848115.1| peptide chain release factor 2 [Enterococcus faecium TX0133C] gi|314948616|ref|ZP_07851991.1| peptide chain release factor 2 [Enterococcus faecium TX0082] gi|314953358|ref|ZP_07856285.1| peptide chain release factor 2 [Enterococcus faecium TX0133A] gi|314993437|ref|ZP_07858802.1| peptide chain release factor 2 [Enterococcus faecium TX0133B] gi|314995786|ref|ZP_07860875.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01] gi|227178781|gb|EEI59753.1| peptide chain release factor 2 [Enterococcus faecium TX1330] gi|257814109|gb|EEV42867.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933] gi|257818383|gb|EEV45711.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502] gi|257819877|gb|EEV47025.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501] gi|257826756|gb|EEV53382.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410] gi|257831945|gb|EEV58366.1| peptide chain release factor 2 [Enterococcus faecium Com12] gi|257835903|gb|EEV60977.1| peptide chain release factor 2 [Enterococcus faecium Com15] gi|260074277|gb|EEW62599.1| peptide chain release factor 2 [Enterococcus faecium C68] gi|260077176|gb|EEW64896.1| peptide chain release factor 2 [Enterococcus faecium TC 6] gi|289162175|gb|EFD10038.1| peptide chain release factor 2 [Enterococcus faecium D344SRF] gi|291588665|gb|EFF20498.1| peptide chain release factor 2 [Enterococcus faecium E1071] gi|291590782|gb|EFF22498.1| peptide chain release factor 2 [Enterococcus faecium E1636] gi|291596206|gb|EFF27469.1| peptide chain release factor 2 [Enterococcus faecium E1679] gi|291598167|gb|EFF29266.1| peptide chain release factor 2 [Enterococcus faecium U0317] gi|291601465|gb|EFF31736.1| peptide chain release factor 2 [Enterococcus faecium E1039] gi|291605664|gb|EFF35105.1| peptide chain release factor 2 [Enterococcus faecium E1162] gi|291607470|gb|EFF36812.1| peptide chain release factor 2 [Enterococcus faecium E980] gi|292643113|gb|EFF61254.1| peptide chain release factor 2 [Enterococcus faecium PC4.1] gi|313590058|gb|EFR68903.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01] gi|313592102|gb|EFR70947.1| peptide chain release factor 2 [Enterococcus faecium TX0133B] gi|313594634|gb|EFR73479.1| peptide chain release factor 2 [Enterococcus faecium TX0133A] gi|313599943|gb|EFR78786.1| peptide chain release factor 2 [Enterococcus faecium TX0133C] gi|313641133|gb|EFS05713.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04] gi|313644947|gb|EFS09527.1| peptide chain release factor 2 [Enterococcus faecium TX0082] Length = 327 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 162/324 (50%), Positives = 220/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ E + + L + +++E+ EE D ++ +E Sbjct: 1 MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQEEPDAAMQEEAE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + +++ + LL G D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+ Sbjct: 61 TRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D++I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITH+PTG VV Q +RSQ Sbjct: 181 DVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + V+DGDLD F+ L + Sbjct: 301 VETGNVQAVMDGDLDLFIDGYLKM 324 >gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083] gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083] Length = 368 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 159/353 (45%), Positives = 218/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKADAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD L E L +K ++ + +LLSGE DS +A + + Sbjct: 73 RSRIDDLAVLFEMAEEEDDSDTLAEAESELTSVKKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE++ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E + E+ A Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRR-QEEQAAMDALKG 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT+ E +P V +G++D F++A + +K Sbjct: 312 DGGNSWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|332971716|gb|EGK10664.1| peptide chain release factor RF2 [Desmospora sp. 8437] Length = 331 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 228/325 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E HL + +KE+++ + ++ EL EEDD S+L E Sbjct: 1 MTDPAFWNDQGKAQKVIDENNHLKGIVQGVKELEEAHEELQVIAELIAEEDDESMLPEAE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L+ +K +++ + LLS D N A LE+H GAGGTESQDWA +LLRMYTRWAE R Sbjct: 61 EGLKDLKRKLDEFELSLLLSDPYDKNSAILELHPGAGGTESQDWAQILLRMYTRWAEHRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L+ GEEAG+KS TLLIKG NAYG+L+ E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 YKVETLDFLPGEEAGVKSVTLLIKGHNAYGYLRAEKGVHRLVRISPFDSSGRRHTSFVSA 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++D EIEI D +IDTYR+SGAGGQHVNTTDSAVRITH+PT +VV CQ ERSQ Sbjct: 181 NVMPEIEDDDEIEIRSEDIKIDTYRSSGAGGQHVNTTDSAVRITHLPTNIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A +L+A+L E +++++++ + +TEIGWG QIRSYV PY MVKD RT Sbjct: 241 IKNRDRAMKILKARLVERQMEEKQKEIAELKGEQTEIGWGNQIRSYVFHPYSMVKDHRTQ 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F++A L + Sbjct: 301 VEVGNVQSVVDGEIDTFIEAYLRQQ 325 >gi|300781771|ref|ZP_07091625.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC 33030] gi|300533478|gb|EFK54539.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC 33030] Length = 364 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 159/353 (45%), Positives = 220/353 (62%), Gaps = 6/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L + + D D R L + DP LW + A+ + E + + ++ + Sbjct: 12 LEQTLTTIEKVMDLDEMDARARELEQQAADPSLWDDPEHAQSVTTELSSVQARVRRVRSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ ELA EE D ++ D L + VE + ++LSGE D +A + + Sbjct: 72 RQRIDDLPVMYELAAEEGDYTL---AEDELADLTTAVETLEVTTMLSGEYDQREAVVNIR 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 129 SGAGGVDAADWAEMLMRMYIRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I +S+ RID YR+SG GGQ Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIPDSEIRIDVYRSSGPGGQS 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GES 301 VNTTDSAVRITH PTG+VV CQ E+SQ +NKA A N+L++KL LE +++EE A + Sbjct: 249 VNTTDSAVRITHEPTGIVVTCQNEKSQIQNKASAMNVLQSKL--LERKRQEEKAELDALG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D F+++ + + Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWR 359 >gi|330991179|ref|ZP_08315132.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1] gi|329761765|gb|EGG78256.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1] Length = 333 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 196/312 (62%), Positives = 247/312 (79%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ LMRER L N I ++ ++ + D L L+ELA E D +++ E L+ + Sbjct: 2 WNDAEAAQKLMRERTLLANQIEGVQRLEADVNDTLELVELAEMEGDSAVVAEAVAGLRAL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 E + ++ ESLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K + Sbjct: 62 AEEAKRRETESLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E +GE+AGIKSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVV Sbjct: 122 ESSEGEQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DDSIEIEI+E+D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A Sbjct: 182 DDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRAT 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML+A++YE ELQKRE A E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+P Sbjct: 242 AMTMLKARMYEQELQKREAAAAQTEANKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKTNP 301 Query: 336 SDVLDGDLDDFM 347 +LDGD+DDFM Sbjct: 302 DAILDGDIDDFM 313 >gi|49188023|ref|YP_031276.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne] gi|49181950|gb|AAT57326.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne] Length = 326 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 165/321 (51%), Positives = 214/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 5 GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 64 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 65 GLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 124 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 244 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 305 NVQAVMDGEIDPFIDAYLRSR 325 >gi|221633612|ref|YP_002522838.1| peptide chain release factor 2, programmed frameshift [Thermomicrobium roseum DSM 5159] gi|254790922|sp|B9L0E3|RF2_THERP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|221155396|gb|ACM04523.1| peptide chain release factor 2, programmed frameshift [Thermomicrobium roseum DSM 5159] Length = 374 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 156/350 (44%), Positives = 224/350 (64%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L+ +G + Q++ L + DP LWQ+ A+ L+R L + + + Sbjct: 11 ELVERLDRIGVRLCLPSKRQQIEQLEHEAADPDLWQDPQRAQSLLRRLSQLRDLVQEWET 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L L LA DD + + + V + LL+G+ D +DA L V Sbjct: 71 LSQQARDLLELRALA--SDDLELAGQVEQEATELAERVRQLELRLLLTGQYDGHDAILAV 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG GG ++QDWA MLLRMY RWA++ F E +++ +GEEAGIKSAT+ ++GP AYG+L Sbjct: 129 HAGTGGVDAQDWAEMLLRMYLRWAQRAGFAAEVVDLLEGEEAGIKSATVEVRGPYAYGYL 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G HRLVR+SP+D+ RRHTSF+ + V P+V++ ++EI E D RIDT+RASG GGQ Sbjct: 189 KGEAGTHRLVRLSPFDAAHRRHTSFALVEVLPLVEEDDDVEIREEDIRIDTFRASGHGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PTG+VV CQ ERSQ +N+ A +L+A+L EL++++R+E + Sbjct: 249 HVNKTESAVRITHLPTGIVVTCQNERSQIQNRETAMKILKARLLELKIRQRQEEQARLKG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG +IRSYVL PY MV D RT + + VL+G++D F++A L Sbjct: 309 KPVVTGWGNRIRSYVLHPYTMVTDHRTEVSTPNIQAVLEGEIDPFIEAYL 358 >gi|242242124|ref|ZP_04796569.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144] gi|242234437|gb|EES36749.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144] Length = 332 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 158/326 (48%), Positives = 220/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ + L + +S ++ + + D EL EE D + +E Sbjct: 1 MTDPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDWA MLLRMY R+ E+ Sbjct: 61 EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWAGMLLRMYQRYCEQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++E+ + +IGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E V+DG++ F++A L + Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326 >gi|18311152|ref|NP_563086.1| peptide chain release factor 2 [Clostridium perfringens str. 13] gi|18145835|dbj|BAB81876.1| peptide chain release factor 2 [Clostridium perfringens str. 13] Length = 323 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 152/322 (47%), Positives = 219/322 (68%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I + + +R+ D +L EL +EE+D +E Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFRNLNERIDDVEVLKEL-MEENDEETAKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E ++ + V+DGD+D+F+ A L Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321 >gi|126652452|ref|ZP_01724624.1| peptide chain release factor 2 [Bacillus sp. B14905] gi|126590723|gb|EAZ84838.1| peptide chain release factor 2 [Bacillus sp. B14905] Length = 328 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 170/326 (52%), Positives = 224/326 (68%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P W + A++++ E L ++ KE+++ + + LEL EE D + +E Sbjct: 1 MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKELEEIHENLDMTLELLREEPDEELQEEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 L + ++ + + LLSG D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 GKELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 GFKVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P D++IEI+I D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERS Sbjct: 181 CDVMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ +A ML+ KLY+LEL+K++ + + +IGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E + V+DGD+D F+ A L + Sbjct: 301 NEETGNVGAVMDGDVDPFINAYLRSR 326 >gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 336 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 169/332 (50%), Positives = 237/332 (71%), Gaps = 1/332 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L+++ + LWQ+ +A+ +++ER + N + +++ D + L++ A++E+D Sbjct: 2 RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E + L +++ ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY Sbjct: 62 EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 RWAE FK E +E +GE GIKSA + I G AYGW K E G+HRLVRISP+D+N Sbjct: 122 IRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ RSQH+NK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ PY Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QMVKDLRT E + + V DG++D F+ + L Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLT 333 >gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila simulans] gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi] gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila simulans] gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi] Length = 336 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 169/332 (50%), Positives = 238/332 (71%), Gaps = 1/332 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L+++ + +LWQ+ +A+ +++ER + N + +++ D + L++ A++E+D Sbjct: 2 RLEELDSQASNDNLWQDNQKAQEILKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E + L +++ ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY Sbjct: 62 EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 RWAE FK E +E +GE GIKSA + I G AYGW K E G+HRLVRISP+D+N Sbjct: 122 VRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ RSQH+NK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ PY Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QMVKDLRT E + + V DG++D F+ + L Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLT 333 >gi|89068846|ref|ZP_01156229.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516] gi|89045616|gb|EAR51679.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516] Length = 374 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 193/351 (54%), Positives = 236/351 (67%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N + EDP LW + A+ LMRERQ L ++I I Sbjct: 12 IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPAAAQKLMRERQALVDSIETYDGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD ++ E L +K K+ E+LL GEAD ND +LE++ Sbjct: 72 ARELADNVELIELGEMEDDSEVVAEAEAALAALKERAAQKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY RWAEKR +K E G EAGIKS + I GPNAYGWLK Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEAGTEAGIKSVSYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+ R TSF+S+WVYPVVDD+IEIEI+ S+ R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFG-KGTRETSFASVWVYPVVDDNIEIEINPSEIRLDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV E+SQH+N+ A L+++LY++EL +R N + Sbjct: 251 VNTTDSAVRITHLPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHEA 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K GWG QIRSYVLQPYQMVKDLRT E + VLDG LD FM ATLA+ Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTGHETSDTGGVLDGALDGFMAATLAM 360 >gi|313888002|ref|ZP_07821680.1| peptide chain release factor 2 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845957|gb|EFR33340.1| peptide chain release factor 2 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 371 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 177/349 (50%), Positives = 237/349 (67%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 LG + D+ +++ LN K +P W + A+ ++RE I ++ D Sbjct: 18 TTKSLGESLEIDSLKEKVVELNKKQMEPGFWDDNESAQKVIRETNSYQRKIDQYDKLIDL 77 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D L+ L E+D S + + + I+ + + +LL+GE DS+DA L +HAGA Sbjct: 78 ITDAEDLIALMEIEEDYSSYSDFQELVDEIEKDTAEFKLNTLLNGEYDSHDAILSIHAGA 137 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLRMYTR+AE + FK E L++ +EAGIKS TL I G NAYG+LKGE+ Sbjct: 138 GGTEAQDWASMLLRMYTRYAENKGFKVETLDLLKEDEAGIKSVTLKISGDNAYGYLKGEK 197 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DSN RRHTSFSS+ V+P +DD E+EI + + +IDTYR+SGAGGQHVNT Sbjct: 198 GVHRLVRISPFDSNKRRHTSFSSVDVFPEIDDDTEVEIKDEELKIDTYRSSGAGGQHVNT 257 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITHIPTG+VVQCQ ERSQ +N+ +A NML+AKL L ++++E + + ++ Sbjct: 258 TDSAVRITHIPTGIVVQCQNERSQIQNREKAMNMLKAKLVALAEEEKKEKIEDLQGNYSQ 317 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYV QPY MVKD RTN++ V+DGDLD F+ A L K Sbjct: 318 IAWGSQIRSYVFQPYTMVKDHRTNVDVGDVEKVMDGDLDIFINAYLQDK 366 >gi|168210100|ref|ZP_02635725.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC 3626] gi|170711768|gb|EDT23950.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC 3626] Length = 323 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 152/322 (47%), Positives = 218/322 (67%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D +E Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMY RW EK+ Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYIRWCEKKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E ++ + V+DGD+D+F+ A L Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321 >gi|313837551|gb|EFS75265.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2] gi|314927570|gb|EFS91401.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1] gi|314972490|gb|EFT16587.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3] gi|328907839|gb|EGG27602.1| peptide chain release factor 2 [Propionibacterium sp. P08] Length = 371 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 219/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLEKQVAAPNLWDDQENAQWVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFATADDDKESLTEATSETVKLREEIDALEVRILLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ +K E L+ EEAGIKSAT ++ P +YG L Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWAERHGYKVEILDTSYAEEAGIKSATFVVHAPFSYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL LE + E+ A + Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKL--LEKAREEQEAEMNSLK 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 314 SEGNSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIGAGIRWRR 366 >gi|89055024|ref|YP_510475.1| peptide chain release factor 2 [Jannaschia sp. CCS1] gi|88864573|gb|ABD55450.1| bacterial peptide chain release factor 2 (bRF-2) [Jannaschia sp. CCS1] Length = 375 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 191/353 (54%), Positives = 243/353 (68%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ L LG D + A RL N + EDP+LW + +A+ LMR+RQ L + + + Sbjct: 11 KIRNSLTLLGQRMDIETAPHRLEEFNARVEDPNLWNDPEKAQKLMRDRQVLVDKMKQYET 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + DN L+EL EDD ++ E L + E K+ E+LL GEADSND +LE+ Sbjct: 71 IRQGVDDNAELIELGEMEDDAEVVAEAEAALTALVDEAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMYTRWAEK+ + + GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYTRWAEKQGYDVDLQSFSAGEEAGIKSAVYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSAKVNEVHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + GWG QIRSYVLQPYQMVKDLRT E + VLDG++D M + LA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTAFETSDTQGVLDGNIDGLMASVLAMD 362 >gi|327441322|dbj|BAK17687.1| protein chain release factor B [Solibacillus silvestris StLB046] Length = 328 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 171/325 (52%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ E + ++ KE+ D + + LEL EE D + +E Sbjct: 1 MLEPEFWNDQNGAQAIINESNGIKAVVNEYKELVDTQENLEMTLELLREEPDEELQEEIG 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + ++E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 KELAEFQTKMEEFELQMLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK ++ G+EAGIKS TL I G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVTTIDYLPGDEAGIKSVTLQISGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEI+I D ++DTYRA+GAGGQH+NTTDSAVRITH+PTGVVVQCQ ERSQ Sbjct: 181 DVMPEFNDEIEIDIRTEDLKVDTYRATGAGGQHINTTDSAVRITHLPTGVVVQCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+LE++K++ + + EIGWG QIRSYV PY MVKD RT+ Sbjct: 241 IKNRDAAMKMLKSKLYQLEIEKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 AETGNVGAVMDGDLDIFITAYLRSK 325 >gi|139474158|ref|YP_001128874.1| peptide chain release factor 2 [Streptococcus pyogenes str. Manfredo] gi|166225116|sp|A2RFN2|RF2_STRPG RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|134272405|emb|CAM30661.1| peptide chain release factor 2 [Streptococcus pyogenes str. Manfredo] Length = 365 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 151/354 (42%), Positives = 220/354 (62%), Gaps = 2/354 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++ +L D D + ++ L +P W + I A+ +E L Sbjct: 11 VENKEKLTSFRRSLDLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFH 70 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +Q+ + +LLE+ ++D S+ +E +NL ++ + + LLS D N+A LE Sbjct: 71 NMQELSDETELLLEML--DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILE 128 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H G+GGTE+QDW ++LLRMYTR+ FK E L+ G+EAGIKS TL +GPNAYG Sbjct: 129 IHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGL 188 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+DS RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGG Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGG 248 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN + VR+THIPTG+VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALK 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYV PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362 >gi|319401169|gb|EFV89384.1| peptide chain release factor 2 [Staphylococcus epidermidis FRI909] Length = 332 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 158/326 (48%), Positives = 221/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ + L + +S ++ + + D EL EE D + +E Sbjct: 1 MTDPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ Sbjct: 61 EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++E+ + +IGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E V+DG++ F++A L + Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326 >gi|157149715|ref|YP_001450721.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis substr. CH1] gi|189040006|sp|A8AY61|RF2_STRGC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157074509|gb|ABV09192.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis substr. CH1] Length = 364 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 158/351 (45%), Positives = 220/351 (62%), Gaps = 2/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 +L G D + + ++ L K +P W + I A+ +E L ++ Sbjct: 14 REKLASFRGSLDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMT 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D ++ ILL+ E D S+ +E + L ++ + + LLS D+N+A LE+H Sbjct: 74 DLFDESEILLDFLAE--DDSVQEELEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHP 131 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDW +MLLRMYTR+ + FK E L+ G+EAGIKS TL +GP+AYG LK Sbjct: 132 GSGGTEAQDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKS 191 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+V Sbjct: 192 EMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNV 251 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+THIPTG+VVQ +R+Q+ N+ +A ML+AKLY+LE +K+ + + K Sbjct: 252 NKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDK 311 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIRSYV PY MVKD RT+ E V+DGDLD F+ A L + Sbjct: 312 KEISWGSQIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 362 >gi|167039139|ref|YP_001662124.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514] gi|166853379|gb|ABY91788.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514] Length = 330 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 221/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W ++ +++ L ++++ L + + + D L+EL LEE D SI E Sbjct: 1 MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + Sbjct: 61 KEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325 >gi|257870245|ref|ZP_05649898.1| peptide chain release factor 2 [Enterococcus gallinarum EG2] gi|257804409|gb|EEV33231.1| peptide chain release factor 2 [Enterococcus gallinarum EG2] Length = 329 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E ++ + + +LLE+ EE D + E + Sbjct: 1 MADPTFWDDSEQAQKVINENNANKETYDQFNQLAEEFEELEVLLEMIQEEPDAEMEAELA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +Q + ++ + LL D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+ Sbjct: 61 ERIQALNEKMGTYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDGAIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L +K Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|302872499|ref|YP_003841135.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis OB47] gi|302575358|gb|ADL43149.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis OB47] Length = 372 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 169/349 (48%), Positives = 235/349 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D D L +L ++T +P WQ++ ++ ++++ + L + I +++ Sbjct: 15 EEDLKEMRVSLDIDRLQSELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLC 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL++EE + + +E L ++ ++E + E LL+G D N+A L +HA Sbjct: 75 SQWEDLKVLTELSIEEGNHEMAEELEKELLDLEKKIEDFKIEVLLNGPYDKNNAILSIHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHV Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 T+IGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 315 TDIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363 >gi|187734757|ref|YP_001876869.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC BAA-835] gi|187424809|gb|ACD04088.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC BAA-835] Length = 329 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 163/326 (50%), Positives = 217/326 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ LM E L + + ++ RL D +ELA E DD + +E Sbjct: 1 MSAPDFWDDQNAARALMAEVNPLKHRMEAFSALKSRLEDIDAAIELAQEADDDDLGREAV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + R + + + +LL+G D Y+ +HAGAGGTE+ DWA+MLLRMY RW E+R Sbjct: 61 EEFARWQKSLADFELLTLLNGPQDQASCYVTIHAGAGGTEACDWASMLLRMYIRWCERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F LE DG++AGI+S TL + G AYG+LK E+G+HRLVRISP+DS +RHTSF+S+ Sbjct: 121 FSVTYLESTDGDDAGIRSVTLKVDGEYAYGYLKNERGIHRLVRISPFDSAGKRHTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 P V DSI IEI + D ++DTYR+ G GGQ+VN ++AVRITHIP+GV+V CQ ERSQ Sbjct: 181 DATPEVSDSINIEILDKDLKVDTYRSGGKGGQNVNKVETAVRITHIPSGVIVACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A NMLRAKLY++E K++ A+ S K +IGWG QIRSYV QPYQMVKDLRT Sbjct: 241 LRNKEEAMNMLRAKLYQIEEDKKQAEADRQYSEKGDIGWGNQIRSYVFQPYQMVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 +E + DV+DG+LD F++A L K Sbjct: 301 VESGNIQDVMDGNLDPFIEAMLRGHK 326 >gi|256390605|ref|YP_003112169.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928] gi|256356831|gb|ACU70328.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928] Length = 368 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 152/354 (42%), Positives = 214/354 (60%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L + + + D +++ L + P LW + +A+ + + L ++ Sbjct: 11 NLRTTMASIEAVLDLGKLRAQIADLEEQASAPDLWDDQAKAQAVTSKLSGLQAELNRFST 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + RL D +L EL E D L E L + V + +LLSGE D+ +A + + Sbjct: 71 LNRRLEDIEVLFELGQSEGDEDALAEVQGELVDVSKAVGELEVRTLLSGEYDAREALVTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 A AGG ++ D+A MLLRMYTRWAE+ ++ E + EEAGIKSATL +K P AYG L Sbjct: 131 RAEAGGVDAADFAEMLLRMYTRWAERHNYQYEVYDTSYAEEAGIKSATLTVKAPYAYGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S ++I E + R+D YR+SG GGQ Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQSDHVDIPEDELRVDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+P+G+VV CQ ERSQ +N+A A +L+AKL + + E+ Sbjct: 251 GVNTTDSAVRITHLPSGIVVSCQNERSQIQNRASAMAVLQAKLLQRRR-EEEQAKMDALK 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQ+VKDLRTN E + + VLDGD+D+F++A + +K Sbjct: 310 DDSSGSWGNQMRSYVLHPYQLVKDLRTNYETGNTTAVLDGDIDEFIEAGIRWRK 363 >gi|254386617|ref|ZP_05001914.1| peptide chain release factor 2 [Streptomyces sp. Mg1] gi|194345459|gb|EDX26425.1| peptide chain release factor 2 [Streptomyces sp. Mg1] Length = 369 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 161/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDKLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E DD L E + L ++ ++ + +LLSGE +A + + Sbjct: 73 RGRIDDLAVLFELAQEMDDADTLAEAENELTSVRKALDEMEVRTLLSGEYAEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +EI E + RID YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVESSDHVEIDEGELRIDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMDALK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363 >gi|114798643|ref|YP_760613.1| peptide chain release factor 2, programmed frameshift [Hyphomonas neptunium ATCC 15444] gi|123128746|sp|Q0C0Y0|RF2_HYPNA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|114738817|gb|ABI76942.1| peptide chain release factor 2, programmed frameshift [Hyphomonas neptunium ATCC 15444] Length = 368 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 206/352 (58%), Positives = 255/352 (72%), Gaps = 2/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ L DWD A +RL L +E P+ W + EA+ +MRERQ L + I+ ++ Sbjct: 11 KIESSAALLRRRLDWDTATKRLDELTALSERPNFWDDPQEAQAMMRERQKLADGIALVQT 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L+ELA E D S+L + L+R + +LLSGEAD ND YL++ Sbjct: 71 LEKDVADAPELMELA--EGDASMLADLEATLRRAAARAAEAELAALLSGEADGNDCYLQI 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AG GGTESQDWA++L RMY RWAEKR + E L+ DGEEAGIKSATL IKG NAYGWL Sbjct: 129 NAGEGGTESQDWASILRRMYVRWAEKRGYGVELLDERDGEEAGIKSATLQIKGENAYGWL 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K EQGVHRLVRISP+DS++RRHTSFSS+ V PV+DD I++EI+ SD R DTYRASGAGGQ Sbjct: 189 KSEQGVHRLVRISPFDSSARRHTSFSSVAVSPVIDDKIDVEINPSDVRTDTYRASGAGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVR+THIPT VVQCQ RSQH+N+ +AW MLR+KLYELELQKR +A+ + Sbjct: 249 HVNRTDSAVRLTHIPTNTVVQCQAGRSQHQNRDEAWKMLRSKLYELELQKRRAVADAQYA 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+ IG+G QIRSYVLQPYQMVKDLRT +E + S VLDGD+D F+ A LA Sbjct: 309 DKSAIGFGHQIRSYVLQPYQMVKDLRTEVETSDTSGVLDGDIDRFLSAALAA 360 >gi|227545120|ref|ZP_03975169.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A] gi|300909208|ref|ZP_07126669.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112] gi|227184908|gb|EEI64979.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A] gi|300893073|gb|EFK86432.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112] Length = 332 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 158/325 (48%), Positives = 211/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E L ++D++ D LEL E D + ++ Sbjct: 1 MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAVEPDDDLQKDFE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + +E + LL GE D+ +A LE+H GAGGTE+QDW MLLRMY RW E+ Sbjct: 61 ASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYIRWGEQHA 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS+E++I SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V Q ERSQ Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + +IGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325 >gi|319891756|ref|YP_004148631.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius HKU10-03] gi|317161452|gb|ADV04995.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius HKU10-03] gi|323465075|gb|ADX77228.1| peptide chain release factor 2 [Staphylococcus pseudintermedius ED99] Length = 329 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 219/325 (67%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 DP W N A+ ++ + + + ++ E+ + L + + EL EE D + + Sbjct: 1 MMADPQFWDNQERAQTIIDQNNAIKSVVNNYYEVAETLEEMIATYELLQEEYDDEMKDDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + +V+ + + LL GE D+N+A LE+H GAGGTESQDW NMLLRMY R+ E++ Sbjct: 61 EQEVIGFQTKVDQFELQLLLDGEHDANNAILELHPGAGGTESQDWTNMLLRMYQRYCEQQ 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAG+KS T+L+KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVEIVDYQAGDEAGVKSVTMLVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P ++ IE+EI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPEFNNEKIEVEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML+AKLY+LEL+++E+ + +IGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKAKLYQLELEQKEQELAAIRGEQKDIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 TN E + + V+DG++ F++A L Sbjct: 301 TNEETGNVNAVMDGEIGPFIEAYLR 325 >gi|268611479|ref|ZP_06145206.1| hypothetical protein RflaF_18501 [Ruminococcus flavefaciens FD-1] Length = 372 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 157/349 (44%), Positives = 235/349 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 +++ L + + +NA +R++ L +T W ++ ++ +++E++ L+ I ++ Sbjct: 15 RKEMEELADVLNIENAKKRVAELGDETAKEGFWDDLENSQKVLKEQKSLERKIEKFNKLN 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D L D + L+EL++E +D S ++E + K ++E ++ +LL+GE D +A L HA Sbjct: 75 DSLEDLITLIELSIEAEDESDIEEIKAEAESFKSKLEDEKLSTLLTGEYDGANAILTFHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA ML RMY RWAE+ +FK E L+ DG+EAG+KSA++LI+G NAYG++K Sbjct: 135 GAGGTEAQDWAEMLYRMYNRWAERHEFKVELLDYLDGDEAGMKSASILIEGENAYGYMKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+D+ RRHTSF+++ V P +DDSIE++I D ++ YR+SGAGGQ V Sbjct: 195 ESGVHRLVRVSPFDAQGRRHTSFAALEVMPELDDSIEVDIRPEDIEMEVYRSSGAGGQKV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+ H PTG+VV CQ +RSQ++NK A MLR+KL E++ ++ E + + Sbjct: 255 NKTSSAVRLIHKPTGIVVSCQTQRSQYQNKDYAMKMLRSKLIEIKEREHLEKIEDIKGVQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +I WG QIRSYV PY +VKD RT E + V+DGD+D F+ A L Sbjct: 315 NQIAWGSQIRSYVFMPYTLVKDTRTGFENGNIQAVMDGDIDGFINAYLK 363 >gi|257457828|ref|ZP_05622987.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580] gi|257444541|gb|EEV19625.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580] Length = 363 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 167/349 (47%), Positives = 224/349 (64%), Gaps = 4/349 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GG+FD + +R++ W + +A+ L+ E + L N I + + + Sbjct: 2 LTKFGGVFDSEAVKKRIAEKEAVAGQEGFWNDPKKAEKLLTEIKKLKNRIEPWETLIADI 61 Query: 67 CDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D L EL E D +QE +L+ ++ E +LLS E D +DA+L VHA Sbjct: 62 EDLQTLYELTQEAGDADNADSVQEIDMSLKELQERFEKLNTLALLSDEVDGSDAFLTVHA 121 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DWA ML RMY RWAE+R F E L+ + +E G+KS TL I+G AYG+LK Sbjct: 122 GAGGTEACDWAQMLTRMYLRWAERRGFSVETLDELEADE-GLKSITLQIRGDYAYGFLKA 180 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRL+RISP+D+N+RRHTSFSS++V+PV+DD+IE+ I D R+DTYRA GAGGQHV Sbjct: 181 ETGVHRLIRISPFDANARRHTSFSSVYVFPVLDDTIEVNIRPEDLRVDTYRAGGAGGQHV 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVR+TH+PTG+VV CQ ERSQ N+A A +ML+A+LYE ++E+ + K Sbjct: 241 NKTDSAVRLTHLPTGIVVACQNERSQISNRATAMSMLKARLYEYYRNEKEKENAKFAAEK 300 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 I WG QIRSY+ QPY MVKD RT E + V+DGD+D F++ L Sbjct: 301 KGISWGNQIRSYIFQPYTMVKDHRTKHETGNIQAVMDGDIDGFIEDFLK 349 >gi|312135785|ref|YP_004003123.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis OL] gi|311775836|gb|ADQ05323.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis OL] Length = 372 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 171/349 (48%), Positives = 235/349 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D D L +L ++T +P WQ++ ++ ++++ + L + I +++ Sbjct: 15 EEDLKEMRVSLDIDRLENELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL+LEE + + +E L ++ ++E + E LL+G D N+A L +HA Sbjct: 75 SQWEDLKVLTELSLEEGNHDMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHV Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363 >gi|224373403|ref|YP_002607775.1| peptide chain release factor 2 [Nautilia profundicola AmH] gi|254790918|sp|B9L5Y7|RF2_NAUPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|223589806|gb|ACM93542.1| peptide chain release factor 2 [Nautilia profundicola AmH] Length = 367 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 168/354 (47%), Positives = 229/354 (64%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + RL + P W + + + +E+ + + K+ Sbjct: 12 ELENKIENIESILKPEKLEARLKEIEELENSPDFWNDPKTSAKVQKEKNAILRKLEKYKK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L DN + ELA E+D L E +++Q +K + + E +LS E D+ +A + + Sbjct: 72 AKTALQDNKDMFELASMEEDEETLNEVFNDVQDLKKIIRDLEIEVMLSDENDAKNAIISI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA++L RMY R+AE+R +K E L+ G+EAGIK + L+KG NAYG+L Sbjct: 132 HPGAGGTESHDWASILYRMYLRYAERRGWKVEVLDYQAGDEAGIKDVSFLVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR+SP+DS RRHTSF+S+ V P +DD IEIEI D RID +RASGAGGQ Sbjct: 192 KAENGIHRLVRVSPFDSGGRRHTSFASVQVSPEIDDDIEIEIDPKDIRIDVFRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VV CQ +RSQHKNK A ML++KLYELEL+KR+ Sbjct: 252 HVNKTESAVRITHIPTGIVVGCQTDRSQHKNKDMAMKMLKSKLYELELEKRKAEEEGKP- 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K E+GWG QIRSYVL PYQ VKD R+N + D+LDGDLD+ ++ L +K Sbjct: 311 -KDEMGWGHQIRSYVLFPYQQVKDNRSNKAYSRVDDILDGDLDEVIEDVLIAEK 363 >gi|297620623|ref|YP_003708760.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044] gi|297375924|gb|ADI37754.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044] Length = 326 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 159/323 (49%), Positives = 212/323 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E W + A+ ++ E L KE++ RL D L A E D +L + + Sbjct: 1 MEAAGFWDDPDAAQQVITEINSLKQWTIPCKELKRRLEDVKELQPEAEEAGDEGLLADLN 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L RI+ E+ + +LSGE D+ + YL ++AGAGGTE+ DW ML RMY RW +KRK Sbjct: 61 QELFRIENELGELEIRRMLSGELDNKNCYLSINAGAGGTEACDWVEMLSRMYQRWCDKRK 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E +++ GE AG KS TL + G A+G+ K E+GVHRLVRISP+DS SRRHTSF+S+ Sbjct: 121 WKCEVVDMVPGEVAGTKSVTLKMTGNFAFGYSKAEKGVHRLVRISPFDSGSRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D I+IEI+ D RIDT+RASGAGGQHVN TDSAVR+THIPTGVVV CQ +RSQ Sbjct: 181 DVTPEITDDIQIEINPDDIRIDTFRASGAGGQHVNVTDSAVRMTHIPTGVVVSCQSQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 ++NK + +L++KLYE+E+ +RE+ K +IGWG QIR+YV PY +VKD RT Sbjct: 241 NQNKEACFKILKSKLYEMEVMEREKKIKELGGEKMDIGWGSQIRNYVFHPYSLVKDTRTK 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 +E + V+DG LD F+ A L Sbjct: 301 VESANVQAVMDGSLDLFVNAYLK 323 >gi|328882777|emb|CCA56016.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712] Length = 367 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 161/353 (45%), Positives = 220/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D + ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLEKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E DD L E L ++ ++ + +LLSGE D +A + + Sbjct: 73 RGRIDDLAVLFELAEEMDDPDTLAEAEAELTSVRKALDEMEVRTLLSGEYDEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYSTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ S +EI ES+ R+D YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVESSDHVEIDESELRVDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE Q++EE A + Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERQRQEERAKMDALK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 311 DSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQSVLDGEIDGFLEAGIRWRK 363 >gi|315634626|ref|ZP_07889910.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC 33393] gi|315476574|gb|EFU67322.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC 33393] Length = 325 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 173/324 (53%), Positives = 230/324 (70%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P +W + +A+ L +ER L+ ++ IK ++ L D LLELA+E D E Sbjct: 1 MEQPDVWNDADKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ ++ +F + SGE D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + Sbjct: 61 AELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ Sbjct: 121 FKTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAA 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQ Sbjct: 181 FVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK QA L+AKLYELELQK+ E +K++IGWG QIRSYVL +KDLRT Sbjct: 241 HKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDGDLD F++A+L Sbjct: 300 VENRNTQAVLDGDLDRFIEASLKA 323 >gi|289435770|ref|YP_003465642.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172014|emb|CBH28560.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 327 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + +E Sbjct: 1 MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDITAYMATINAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|325295572|ref|YP_004282086.1| hypothetical protein Dester_1396 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066020|gb|ADY74027.1| hypothetical protein Dester_1396 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 374 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 177/353 (50%), Positives = 243/353 (68%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + + G FD + ++L+ + + + W + +A+ + ER +++ ++ Sbjct: 14 KVKDKYFEIRGYFDIEKMKKKLTEIEEEMSSANFWNDQKKAQSISMERNRIESELNTFSS 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ +L D LLE+A EE + S+L E L+ I+ E+ + +++LSGE D N+A + + Sbjct: 74 IEQQLEDIETLLEIAEEESEESLLDEAESFLKNIERELNSLEVKTVLSGEFDKNNAIVTI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA ML+RMY RWAE++ F+TE L++ + EEAGIKSAT+LIKG AYG L Sbjct: 134 HAGAGGTESCDWAEMLMRMYLRWAERKGFETEILDLQENEEAGIKSATILIKGAYAYGLL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E G HRLVRISP+DSN+RRHTSF + V P +D+ I+IEI + D RIDTYRASGAGGQ Sbjct: 194 RAEHGTHRLVRISPFDSNARRHTSFCGVIVVPEIDEDIDIEIKDEDLRIDTYRASGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+PTG+VV CQ ERSQ +N+ +A +L+A+LYELE QKREE Sbjct: 254 HVNKTDSAVRITHLPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAEARG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYV PYQMVKD RT IE ++ + V+DG++D F++ L K Sbjct: 314 EHKTIAWGNQIRSYVFHPYQMVKDHRTGIETSNINAVMDGEIDQFIEGFLKQK 366 >gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1] gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1] Length = 375 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 171/352 (48%), Positives = 241/352 (68%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ L D + + + + +P W + +AK + ++R+ L + ++ + Sbjct: 11 IKKRFEELSSSIDEEKIKKEIEKYDQMMSEPDFWSDQEKAKSISQKRKALQDKLNTYTSL 70 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ EE D S+ L+ ++ +++ + E+ LS E D N+AYL + Sbjct: 71 KSRIKDLDEMVSELKEE-DLDTTLLISEELEAVEKDLKKFELETYLSDEMDINNAYLTIQ 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLRMYTRWAEK ++ + +I+ + AGIKSATL IKGP AYG+LK Sbjct: 130 AGAGGTEACDWASMLLRMYTRWAEKHGYEVQLTDINPDDVAGIKSATLYIKGPYAYGYLK 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N+RRHTSF+S+ V P V++ + IEI E D RIDTYRASGAGGQ+ Sbjct: 190 SENGVHRLVRISPFDANARRHTSFASVLVVPEVNEDVNIEIKEEDLRIDTYRASGAGGQY 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TD+AVRITHIPTG+VV CQQERSQ +N+ +A ML+A+LY+LELQK EE E Sbjct: 250 VNKTDTAVRITHIPTGIVVACQQERSQIQNRRKAMEMLKARLYQLELQKIEEKKKSLEGP 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG +IRSY+ QP Q+VKDLRT E + V+DG++D+F++A L K Sbjct: 310 KTDIGWGYKIRSYIFQPSQLVKDLRTGEESGNIEAVMDGEIDNFIEAYLRKK 361 >gi|315641246|ref|ZP_07896323.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952] gi|315483013|gb|EFU73532.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952] Length = 340 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 172/336 (51%), Positives = 225/336 (66%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ + +P W + A+ ++ E A E+ D L + +LLE+ E Sbjct: 1 MEEDIAEAENRMAEPGFWDDTQSAQKVINENNSNKEAFDQFHELADELEELEVLLEMIQE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + QE + + ++ + LL G D N+A +E+H GAGGTESQDW +MLL Sbjct: 61 EPDDEMEQELATRASELLGKMSAYELAMLLDGPYDHNNAIIELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RWA+KR F+ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWADKRGFQVETLDYLPGDEAGIKSVTLLIKGRNAFGYLKSEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +RRHTSF S+ V P +DD+I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG Sbjct: 181 ANRRHTSFCSVDVMPELDDTIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 VV Q +RSQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV Sbjct: 241 TVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKQEQEAAALRGEQMEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGD+D F+ A L K Sbjct: 301 PYSMVKDHRTNFETGNVQAVMDGDIDGFIDAYLKQK 336 >gi|229821252|ref|YP_002882778.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333] gi|259585260|sp|C5BYB6|RF2_BEUC1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229567165|gb|ACQ81016.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333] Length = 374 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 223/353 (63%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R++ L+ P LW + A+ + H + + + + Sbjct: 12 LRGTLEQITAVTDPDALRARIAELSEAAAAPDLWDDPDAAQKVTSRLSHTQSELERLDTL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D L++LA EEDD L E L +I+ + + +LL+GE DS +A + + Sbjct: 72 RSRIDDLETLVQLAAEEDDADTLAEAEAELTKIRTSMGELEVRTLLAGEYDSREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE++ + T+ L+ EEAG+KSAT +K P A+G L Sbjct: 132 SGAGGVDAADFAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKVPYAFGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG GGQ Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDIPETDIRIDVFRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L +Q+ E + Sbjct: 252 VNTTDSAVRITHLPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LAMQEEENAKKKELAG 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E +PS V DGD+DDF++A + ++ Sbjct: 311 DVKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRR 363 >gi|25027367|ref|NP_737421.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314] gi|23492648|dbj|BAC17621.1| putative translation releasing factor RF-2 [Corynebacterium efficiens YS-314] Length = 389 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 159/353 (45%), Positives = 219/353 (62%), Gaps = 3/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + + R+ L + DP LW N A+ + E H+ + + E Sbjct: 33 ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 92 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D I+ ELA EE D + L + L ++ VE + +++LSGE D+ +A + + Sbjct: 93 LRQRLDDLPIMYELAEEEGDDTSL--VDEELADLRTGVEALEVKTMLSGEYDAREAVINI 150 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 151 RSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQL 210 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ I+I +S+ R+D YR+SG GGQ Sbjct: 211 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQ 270 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E Sbjct: 271 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKR-QEERAEMDALG 329 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D ++A + + Sbjct: 330 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWR 382 >gi|16801714|ref|NP_471982.1| peptide chain release factor 2 [Listeria innocua Clip11262] gi|16415189|emb|CAC97879.1| prfB [Listeria innocua Clip11262] Length = 327 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + E Sbjct: 1 MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDIKAYVATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDDEIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|150396182|ref|YP_001326649.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419] gi|150027697|gb|ABR59814.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419] Length = 342 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 231/329 (70%), Positives = 280/329 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP LW + EA+ LMRERQ LD+ IS ++ + +L DN+ L+EL EE D +I+ Sbjct: 1 MNNKAEDPSLWNDAAEAQKLMRERQQLDDGISGLRRFEQQLNDNIELIELGEEEGDSAIV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L++++ + KQ E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 SEAEEALRQLRNDAAKKQVEAMLSGEADQNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVD+SI+++I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQ Sbjct: 181 FSSIWVYPVVDESIQVDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA+LYE EL+KREE AN +SKTEIGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTEIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT +E TSP DVLDG+L +FM+A LA + Sbjct: 301 LRTGVESTSPGDVLDGELSEFMEAALAHR 329 >gi|134095412|ref|YP_001100487.1| peptide chain release factor 2 [Herminiimonas arsenicoxydans] gi|133739315|emb|CAL62364.1| Peptide chain release factor 2 (RF-2) [Herminiimonas arsenicoxydans] Length = 325 Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats. Identities = 173/323 (53%), Positives = 231/323 (71%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 EDP +W + A+ L +E++ L+ + + ++ L D L E+A EE+D + Sbjct: 1 MEDPKVWDDPKRAQDLGKEKKSLEAIVHTLIKVDAELKDAHDLFEMAREENDEDTIVAIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + Q + VE +F + SG D+N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ Sbjct: 61 ADTQELLKTVEGMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQYLRYCERKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E LE DGE AGIK+ATL ++G AYG L+ E GVHRLVR SP+DS + RHTSFSS+ Sbjct: 121 FKVEILEQSDGEVAGIKTATLKVEGEYAYGLLRTETGVHRLVRKSPFDSANGRHTSFSSL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVR+TH P+G+VVQCQ +RSQ Sbjct: 181 FVYPEVDDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+NKA+AW+ML+AKL+ELE++ R E SKT++GWG QIRSYVL +KDLRTN Sbjct: 241 HRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWGHQIRSYVL-DQSRIKDLRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + VLDGDLDDF+ A+L Sbjct: 300 FETGNTKAVLDGDLDDFIAASLK 322 >gi|116873873|ref|YP_850654.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742751|emb|CAK21875.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str. SLCC5334] Length = 327 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 214/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + E Sbjct: 1 MLDPNFWNDQQAAQKIINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDITAYMATINEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|126735602|ref|ZP_01751347.1| peptide chain release factor 2 [Roseobacter sp. CCS2] gi|126714789|gb|EBA11655.1| peptide chain release factor 2 [Roseobacter sp. CCS2] Length = 374 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 194/352 (55%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N + EDP LW + A+ LMRERQ L +A+ I Sbjct: 12 IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPEAAQKLMRERQLLVDAMGNYDSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E+D ++ E L ++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 NQELSDNIELIELGEMEEDAEVVAEAEAALVKLADKAAKKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWANML RMY RWAEK+ +K E G+EAGIKSA+ I G NAYGWLK Sbjct: 132 AGAGGTESCDWANMLARMYVRWAEKKGYKVELQAEQSGDEAGIKSASYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRLDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N + Sbjct: 252 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAIKALKSRLYQMELDKRSTLVNEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M ATLA+ Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMAATLAMD 362 >gi|330836506|ref|YP_004411147.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta coccoides DSM 17374] gi|329748409|gb|AEC01765.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta coccoides DSM 17374] Length = 369 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 163/353 (46%), Positives = 226/353 (64%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + D +++ L KT P W + +A+ + L ++ ++ Sbjct: 11 EIKEEAYTVWRRLDSTGIEKQIQELEAKTTLPDFWNDKEKAEKTFSDLSSLKDSFFPWRD 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D L++L EDD S++QE + I+ E + ++LLS D ND +L + Sbjct: 71 LKKRIDDVGDLIDLYANEDDESLVQELDSQILDIEKEFHPLKVKTLLSQRFDKNDCFLSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+ DWA ML+RMY RW E+ FK+E L++ + +E GIKS T+ + G A+G+L Sbjct: 131 HAGAGGTEASDWAAMLMRMYLRWCERNGFKSEILDMQE-DEGGIKSTTIRVSGQYAFGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+DS RRHTSF+S++ PV+DD IEI+I D R+DTYRA GAGGQ Sbjct: 190 KGEAGVHRLVRISPFDSQKRRHTSFTSVYASPVIDDEIEIDIKPEDIRLDTYRAGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH +G+VVQCQ ERSQ NK A+ MLR++LYE +K+E+ Sbjct: 250 HVNKTDSAVRITHFESGIVVQCQNERSQFMNKEVAFKMLRSRLYEYYKEKQEQEHQKTAI 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K I WG QIRSYV QPY MVKD RTN + + V+DGD+DDF++ L Sbjct: 310 AKKGITWGSQIRSYVFQPYTMVKDHRTNCQVGNIQAVMDGDIDDFIEQFLQWD 362 >gi|149194096|ref|ZP_01871194.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2] gi|149136049|gb|EDM24527.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2] Length = 364 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 174/354 (49%), Positives = 238/354 (67%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L + + D +RL + DP+ W + + + +E+ + + K+ Sbjct: 12 ELENKLKNIESILKPDELQKRLDEITQMENDPNFWNDPKNSAKIQKEKNAILRKLEKYKK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L DN + ELA E+D L E ++++ ++ + + E +LSGE D +A + + Sbjct: 72 AKNSLQDNKDMYELATMEEDEETLNEVFNDVKELEKIIRDLEIEVMLSGENDDKNAIITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+AE+R +K + L+ G+EAGIK AT+L+KG NAYG+L Sbjct: 132 HPGAGGTESHDWASMLYRMYLRYAERRGWKVDILDYQAGDEAGIKDATILVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR+SP+DS RRHTSF+S+ V P +DD IEIEI E D RID YRASGAGGQ Sbjct: 192 KAENGIHRLVRVSPFDSGGRRHTSFASVQVSPEIDDDIEIEIDEKDIRIDVYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VV CQQ+RSQHKNK A+ ML++KLYELEL+KR+ Sbjct: 252 HVNKTESAVRITHIPTGIVVSCQQDRSQHKNKEMAFKMLKSKLYELELEKRKAEEEGKP- 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K E+GWG QIRSYVL PYQ VKD R+N + D+LDGDLD+ ++ L ++ Sbjct: 311 -KDEMGWGHQIRSYVLFPYQQVKDNRSNKAYSKVDDILDGDLDEIIEDVLISQQ 363 >gi|282875665|ref|ZP_06284536.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135] gi|281295692|gb|EFA88215.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135] gi|329723235|gb|EGG59765.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU144] gi|329736827|gb|EGG73092.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU028] gi|329737925|gb|EGG74149.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU045] Length = 333 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 155/327 (47%), Positives = 219/327 (66%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 DP W + +A+ ++ + L + ++ ++ + + D EL EE D + E Sbjct: 1 MMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ Sbjct: 61 EEEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQN 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++E+ + +IGWG QIRSYV PY M+KD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMIKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E V+DG++ F++A L + Sbjct: 301 TNEETGKVDAVMDGEIGPFIEAYLRKE 327 >gi|27467454|ref|NP_764091.1| peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC 12228] gi|251810188|ref|ZP_04824661.1| peptide chain release factor 2 [Staphylococcus epidermidis BCM-HMP0060] gi|293368216|ref|ZP_06614845.1| peptide chain release factor RF2 [Staphylococcus epidermidis M23864:W2(grey)] gi|27314997|gb|AAO04133.1|AE016745_232 peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC 12228] gi|251806240|gb|EES58897.1| peptide chain release factor 2 [Staphylococcus epidermidis BCM-HMP0060] gi|291317639|gb|EFE58056.1| peptide chain release factor RF2 [Staphylococcus epidermidis M23864:W2(grey)] Length = 332 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 155/326 (47%), Positives = 219/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ + L + ++ ++ + + D EL EE D + E Sbjct: 1 MTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ Sbjct: 61 EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++E+ + +IGWG QIRSYV PY M+KD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMIKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E V+DG++ F++A L + Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326 >gi|126434177|ref|YP_001069868.1| peptide chain release factor 2 [Mycobacterium sp. JLS] gi|166225109|sp|A3PWV0|RF2_MYCSJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|126233977|gb|ABN97377.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. JLS] Length = 371 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 157/355 (44%), Positives = 220/355 (61%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D R+ L + DP+LW + A+ + E H N + ++E+ Sbjct: 12 LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSIL---QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + R+ D +L E+A EE+ E L ++++++E + +LLSGE D +A + Sbjct: 72 RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I++ E+D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL + + E A Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLARKK-QEERAALDA 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + + Sbjct: 311 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 365 >gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor] Length = 368 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG ++RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNRVRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|259506494|ref|ZP_05749396.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314] gi|259165914|gb|EEW50468.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314] Length = 387 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 159/353 (45%), Positives = 219/353 (62%), Gaps = 3/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + + R+ L + DP LW N A+ + E H+ + + E Sbjct: 31 ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 90 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D I+ ELA EE D + L + L ++ VE + +++LSGE D+ +A + + Sbjct: 91 LRQRLDDLPIMYELAEEEGDDTSL--VDEELADLRTGVEALEVKTMLSGEYDAREAVINI 148 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 149 RSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQL 208 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ I+I +S+ R+D YR+SG GGQ Sbjct: 209 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQ 268 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E Sbjct: 269 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKR-QEERAEMDALG 327 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D ++A + + Sbjct: 328 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWR 380 >gi|294055147|ref|YP_003548805.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM 45221] gi|293614480|gb|ADE54635.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM 45221] Length = 386 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 162/356 (45%), Positives = 226/356 (63%), Gaps = 4/356 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++R+ + D ++ + L + +P W + A+ ++ E L A++ + Sbjct: 14 EITRRAGHIWRYLDGVKKLEEIEALEAQMAEPTFWDDQQAAQKVIAEANRLKAAVNPCRA 73 Query: 62 IQDRLCDNLILLELALE---EDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 + D +LEL E + D + QE D + + +++ + S L+G DS +A Sbjct: 74 FNAEVDDLQAMLELVDEMGGDPDAAAYEQEVLDAVHALLPKLDALELASFLTGPHDSCNA 133 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 L +HAGAGGTES DWA+MLLRMYTRW E+ F + +I GEEAGI SAT+ I+GPNA Sbjct: 134 LLTIHAGAGGTESCDWADMLLRMYTRWGERAGFTVDIQDIMPGEEAGISSATIRIEGPNA 193 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+ K E+GVHRLVRISP+DSN+RRHTSFSS+ V ++D I+++I ES+ R D YRASG Sbjct: 194 YGYAKAERGVHRLVRISPFDSNARRHTSFSSVDVIAEIEDDIDLDIPESEIRTDVYRASG 253 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN T+SAVR+THIPT +VV CQ ERSQ KNKA A L+++LYE L ++ Sbjct: 254 KGGQHVNRTESAVRLTHIPTNLVVTCQNERSQIKNKATAMRTLKSRLYEKMLDEKRSEME 313 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIRSYV QPYQ+V DLRT +++ + V+DG+LD F+ A L Sbjct: 314 KFYGEKGDIAWGNQIRSYVFQPYQLVTDLRTGLKEGNVQGVMDGELDPFVHAWLRA 369 >gi|70727136|ref|YP_254052.1| peptide chain release factor 2 [Staphylococcus haemolyticus JCSC1435] gi|68447862|dbj|BAE05446.1| peptide chain release factor 2 [Staphylococcus haemolyticus JCSC1435] Length = 332 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 159/324 (49%), Positives = 218/324 (67%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+ ++ + L + ++ E+++ + D EL EE D + + Sbjct: 1 MTEPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELLQEELDGDVKSDLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 N+ K +V+ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++ Sbjct: 61 QNVLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 181 DVIPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML+AKLY+L+L+++E + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKAKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 N E V+DG++ F+++ L Sbjct: 301 NEETGKVDAVMDGEIGPFIESYLR 324 >gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus M045] gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus M045] Length = 368 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 158/353 (44%), Positives = 219/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISPYD+ RR TSF+ + + PVV+ + +EI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPYDNQGRRQTSFAGVEILPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT+ E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)] gi|256787399|ref|ZP_05525830.1| peptide chain release factor 2 [Streptomyces lividans TK24] gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24] gi|19864260|sp|Q53915|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)] gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24] Length = 368 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941] gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter xylanophilus DSM 9941] Length = 366 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 182/352 (51%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++L+ L FD +R + L+ + P W + AK + E ++ + ++E+ Sbjct: 11 LSQRLDELEAFFDVGRLRERAARLSEEMSRPGFWDDPDRAKGVAAEFSRTEDRLKLMEEL 70 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D+ LLELA E D +L+E L+ I+ +E ++ L +GE D DA L ++ Sbjct: 71 RGRLEDSSELLELA--EGDRELLEEVERELEGIERRIEEQEVARLFTGEYDEGDAILTIN 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG +SQDWA ML RMY RWAE+R F E +E +GEEAGIKSAT + GP A+G L Sbjct: 129 SGAGGVDSQDWAEMLARMYRRWAERRGFGLEVIEYTEGEEAGIKSATFSVSGPYAFGLLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D++SRRHTSF+S+ V P +DD++E+EI E D ++DTYRASGAGGQH Sbjct: 189 AERGVHRLVRISPFDASSRRHTSFASVAVAPAIDDAVEVEIDEKDLKVDTYRASGAGGQH 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH+PTG+VVQCQ ERSQH+N+ A +L+A+L+ELE +KRE+ Sbjct: 249 VNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLKARLFELEREKREQEIAAQSGE 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EIGWG QIRSYVL PY+MVKDLRT E VLDGDLD F+ A L + Sbjct: 309 KAEIGWGSQIRSYVLHPYRMVKDLRTGEETGDVDRVLDGDLDRFIYAYLKRR 360 >gi|307822369|ref|ZP_07652601.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96] gi|307736935|gb|EFO07780.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96] Length = 347 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 175/343 (51%), Positives = 248/343 (72%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E+P +W N EA+ L +ER L+ ++ I +++ L D Sbjct: 3 LGGIFDFDVKSERLVEVLRELENPKIWDNPEEAQALGKERGQLEVIVNTINDLERGLSDA 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL +A+EEDD ++ D+L+ + V +F + SG+ D+N+A+L++ +G+GGTE Sbjct: 63 EELLLMAVEEDDEETVETVVDDLEHFEKRVADLEFRRMFSGQMDANNAFLDIQSGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+++ RMY RW E++ FKTE +E G+ AGIKSAT+ +G A+GWL+ E GVHR Sbjct: 123 AQDWASIIERMYLRWGEQKGFKTELIEESQGDVAGIKSATIKFEGEYAFGWLRTETGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++V P +DD I+I+I+ +D R+D YRASGAGGQH+N T+SA Sbjct: 183 LVRKSPFDSGNRRHTSFASVFVSPEIDDDIDIDINPADIRVDVYRASGAGGQHINKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH PTG+VVQCQ +RSQHKN+ A L+AKLYELE++KR E A E +K++IGWG Sbjct: 243 VRMTHNPTGIVVQCQSDRSQHKNRDTAMKQLKAKLYELEMRKRSETAQALEDTKSDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN+E + VLDGDLD F++A+L Sbjct: 303 SQIRSYVL-DQSRIKDLRTNVETGNTQAVLDGDLDQFIEASLK 344 >gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM 40736] gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM 40736] Length = 368 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 159/353 (45%), Positives = 218/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364 >gi|317493835|ref|ZP_07952252.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918162|gb|EFV39504.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 320 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 175/318 (55%), Positives = 222/318 (69%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ ++ I ++ L D LLELA+E DD E L ++ Sbjct: 2 WNEPERAQALGKERSSLEEIVNTINQMTQGLDDVSGLLELAIEADDEETFNEAVVELDQL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 ++ +F + SGE DS D Y+++ AG+GGTE+QDWA+MLLRM+ RWAE + FKTE + Sbjct: 62 DAKLAQLEFRRMFSGEYDSADCYIDIQAGSGGTEAQDWASMLLRMFLRWAEAKGFKTEII 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E DGE AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP V Sbjct: 122 EESDGEVAGLKSATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK Q Sbjct: 182 DDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A L+AKLYE E+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMRQLKAKLYEYEMQKKNAEKQVMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDRFIEASLKA 318 >gi|299144433|ref|ZP_07037513.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518918|gb|EFI42657.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 348 Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats. Identities = 176/341 (51%), Positives = 235/341 (68%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD ++ LN K D W N A+ ++RE+ H + I ++ + + L Sbjct: 4 LFDLSEMRNKVKELNDKQMDVGFWDNAENAQKVIREQNHYQSKIDKYDKLIKSINEAEDL 63 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++L EDD S + +L+ I+ + E+LL+GE DSN+ + +HAGAGGTE+QD Sbjct: 64 IDLMEMEDDYSFYGDLKLDLENIEKLSNDFKLETLLNGEYDSNNCIISIHAGAGGTEAQD 123 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA+ML RMY R+AEKR F+ E L++ EEAGIKS TLLI G NAYG+LKGE+GVHRLVR Sbjct: 124 WASMLNRMYVRYAEKRGFRVETLDMLKEEEAGIKSVTLLITGDNAYGYLKGEKGVHRLVR 183 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+N RRHTSF+S+ VYP +DD E+EI D +IDTYR+SGAGGQHVNTTDSAVRI Sbjct: 184 ISPFDANKRRHTSFASLDVYPQLDDDNEVEIKAEDLKIDTYRSSGAGGQHVNTTDSAVRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+VVQCQ ERSQ +N+ +A NML+AKL L ++++E + + ++I WG QI Sbjct: 244 THIPTGIVVQCQNERSQIQNRDKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQI 303 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSYV QPY +VKD RTN E + V+DG LD+F+ + L + Sbjct: 304 RSYVFQPYTLVKDHRTNTEIGDVNKVMDGYLDEFINSYLQL 344 >gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14] gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14] Length = 371 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 219/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT+ E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|160902329|ref|YP_001567910.1| peptide chain release factor 2 [Petrotoga mobilis SJ95] gi|189040002|sp|A9BHH8|RF2_PETMO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|160359973|gb|ABX31587.1| peptide chain release factor 2 [Petrotoga mobilis SJ95] Length = 366 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 236/350 (67%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +F+ D + + L+ + +P+ W + AK + + Q+L + I K+ Sbjct: 12 ELKENFEDLKDVFNIDKVEEEVKKLDKEMMEPNFWNDQNRAKKISKMAQNLKDEIDEFKK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ + I +EL+ EDD S+ + L+ I+ ++ + LLS E D +A+L + Sbjct: 72 LENDFEELEIAVELS--EDDPSMTAQVEAILKVIEKKIGSFRLRMLLSEEYDDANAFLSL 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWA+K + E ++ +G+EAGIKSAT+ I GP AYG L Sbjct: 130 HPGAGGTESQDWASMLLRMYTRWADKNNYDIETIDFQEGDEAGIKSATIKISGPYAYGKL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+N RRHTSF+SI V P D+++EIEI+ D +IDTYR+ GAGGQ Sbjct: 190 KYESGVHRLVRISPFDANGRRHTSFASISVMPEFDENVEIEINPDDLKIDTYRSGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+PTG+VV Q ERSQH+NKA A +L+AKLYELE QK+ E Sbjct: 250 HVNKTDSAVRITHLPTGIVVAVQNERSQHQNKATALKILKAKLYELEHQKKLEEKLRLRG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYVL PY +VKDLRT E ++ VLDG++D+F++ L Sbjct: 310 EVKDISWGNQIRSYVLYPYTLVKDLRTEYETSNAQAVLDGEIDEFIEEEL 359 >gi|47093711|ref|ZP_00231463.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b H7858] gi|254992782|ref|ZP_05274972.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-064] gi|47017905|gb|EAL08686.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b H7858] gi|328465115|gb|EGF36383.1| peptide chain release factor 2 [Listeria monocytogenes 1816] Length = 327 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 216/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + +E Sbjct: 1 MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD+F+ A L + Sbjct: 301 YETGNIQAVMDGDLDEFINAYLRSR 325 >gi|310822818|ref|YP_003955176.1| peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1] gi|309395890|gb|ADO73349.1| Peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1] Length = 380 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 157/341 (46%), Positives = 228/341 (66%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD D R+S ++ + P+ W + +A+ L++E+ L+ ++ + L D Sbjct: 27 GGIFDLDRKRSRISLIDRDSTLPNFWDDNTKAQALLKEKSTLEASVGAFDKALRGLDDAQ 86 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+ELA E +D + QE L ++ ++ + +LSGE D ++ +++++AGAGGT+S Sbjct: 87 TLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRSNCFMDINAGAGGTDS 146 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA ML+RMYTR+ E+R ++ E ++ GEEAG K+ +L I+G AYG+LK E GVHRL Sbjct: 147 MDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYAYGYLKAEVGVHRL 206 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D + R GAGGQ VN T S Sbjct: 207 VRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGGQKVNKTSSTA 266 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 ++ H+PT +++ CQ ERSQ NK A+ +LRA+LYELEL+KRE + E+ K +I +G Sbjct: 267 QLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERDAAEAQKKDISFGS 326 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL PY+MVKDLRT +E + VLDGDL+ F+ A L Sbjct: 327 QIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 367 >gi|163942871|ref|YP_001647755.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4] gi|229014346|ref|ZP_04171465.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048] gi|229063835|ref|ZP_04200139.1| Peptide chain release factor 2 [Bacillus cereus AH603] gi|229135993|ref|ZP_04264753.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196] gi|229169892|ref|ZP_04297588.1| Peptide chain release factor 2 [Bacillus cereus AH621] gi|163865068|gb|ABY46127.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4] gi|228613606|gb|EEK70735.1| Peptide chain release factor 2 [Bacillus cereus AH621] gi|228647451|gb|EEL03526.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196] gi|228716472|gb|EEL68176.1| Peptide chain release factor 2 [Bacillus cereus AH603] gi|228746946|gb|EEL96830.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048] Length = 326 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 162/321 (50%), Positives = 217/321 (67%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + + +++ + + + +L EE D + +E ++ Sbjct: 5 GFWDDQQGAQAVINEANALKDMVGRFRQLDETFENLEMTHDLLKEEYDEDLHEELESEVK 64 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR+FK E Sbjct: 65 TLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRRFKVE 124 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 125 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 184 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH+PT VV CQ ERSQ KN+ Sbjct: 185 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQIKNR 244 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 245 EHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 304 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG+++ F+ A L + Sbjct: 305 NVQAVMDGEINPFIDAYLRSR 325 >gi|256851470|ref|ZP_05556859.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN] gi|260660891|ref|ZP_05861806.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN] gi|282933470|ref|ZP_06338846.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] gi|297206285|ref|ZP_06923680.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16] gi|256616532|gb|EEU21720.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN] gi|260548613|gb|EEX24588.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN] gi|281302401|gb|EFA94627.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] gi|297149411|gb|EFH29709.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16] Length = 332 Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats. Identities = 155/325 (47%), Positives = 210/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N A+ L+ E L ++ D LEL EE D + E Sbjct: 1 MADPDFWNNQESAQKLISETNKLKEKRDHFNDLAQAFSDEETALELLKEEPDDDLQVEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+++K + LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E Sbjct: 61 TDLEKLKDSFHQYELNLLLSGKYDANNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E + G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FTFEIDDYEPGDEAGVKSVSILIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A N LRAKL++LE +K+ + + + +I WG QIRSYV PY MVKD RTN Sbjct: 241 FQNKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + + V+DG LD+ + + L + Sbjct: 301 FETSDVNGVMDGKLDNLIYSFLQWR 325 >gi|254831068|ref|ZP_05235723.1| peptide chain release factor 2 [Listeria monocytogenes 10403S] Length = 327 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 216/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + +E Sbjct: 1 MLDPNFWNDQQAAQKVINESNVYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|227893185|ref|ZP_04010990.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM 16047] gi|227865051|gb|EEJ72472.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM 16047] Length = 332 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 154/324 (47%), Positives = 204/324 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ L+ + L ++Q D LEL EE D + +ET Sbjct: 1 MAQPDFWNDQEKAQKLINDNNLLKEKRDSFLKLQKGYEDVSTALELLREEPDADLQKETE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ E + + LLSG+ D+++A LE+H GAGGTE+ DW MLLRMY R+ + Sbjct: 61 NDLANLQEEFHNYELDLLLSGKYDNHNALLEIHPGAGGTEAMDWGQMLLRMYQRYCDSAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS + I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VDDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEVDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG L F+ + L Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324 >gi|220910508|ref|YP_002485819.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425] gi|219867119|gb|ACL47458.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425] Length = 361 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 149/344 (43%), Positives = 221/344 (64%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD ++S L P+ W + A++ ++E L + + + Q L D + Sbjct: 12 RTIFDVPALQAKISDLEQVAAQPNFWDDQATAQVTLQELNELKSHLEQLHRWQATLSDAV 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D S+LQE SDNL+++ ++ + E LLSG D N A L ++AGAGGT++ Sbjct: 72 AALELVELEPDESLLQEASDNLKQLDQQLSQWELEQLLSGTYDRNGAVLTINAGAGGTDA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE+ +K E+ +G+EAGIKSATL I G AYG+L+ E+G HRL Sbjct: 132 QDWAEMLLRMYTRWAEQHGYKVHLAELSEGDEAGIKSATLEIDGRYAYGYLRSEKGTHRL 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +D S+++EI + D I T R+ G GGQ+VN ++AV Sbjct: 192 VRISPFNANGKRQTSFAGVEVMPQLDHSVQLEIPDKDLEITTSRSGGKGGQNVNKVETAV 251 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V+C QERSQ +NK +A +L+AKL + +++ + E WG Sbjct: 252 RIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIIAQEQKAQEIADIRGDAVEAAWGT 311 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIR+YV PY++VKD+RT +E + V++G+LD+F++A L + Sbjct: 312 QIRNYVFDPYKLVKDVRTGVETQAIEVVMNGELDEFIQAYLRQE 355 >gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] Length = 368 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S ++I ESD R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364 >gi|58584553|ref|YP_198126.1| protein chain release factor B [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418869|gb|AAW70884.1| Protein chain release factor B [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 336 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 164/334 (49%), Positives = 232/334 (69%), Gaps = 1/334 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L ++T D +LWQ+ +A+ +++E + N + +++ D + L++ A++E+D Sbjct: 2 RLEKLESQTADGNLWQDNQKAQEVLKEYSKIKNDVESFSKLESDYNDAISLMKSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E + L +++ ++ K+ + L + EAD+ND +LE+H+GAGGTES DWA ML+RMY Sbjct: 62 EEFFSEVENELVKLEKLIKRKETDFLFTDEADNNDCFLEIHSGAGGTESNDWAEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 RWAE FK E +E +G+ GIKSA + I G AYGW K E G+HRLVRISP+D+NS Sbjct: 122 IRWAEIYHNFKVEVVEKLEGDSIGIKSAIIKIIGEKAYGWAKSESGIHRLVRISPFDANS 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF SI V PV++DSI+I + E +IDTYRASGAGGQHVN T+SAVR+THIPTGV+ Sbjct: 182 KRHTSFVSIGVTPVIEDSIDIAVDEGTLKIDTYRASGAGGQHVNKTESAVRVTHIPTGVI 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ RSQH+NK +A +L+ +LY+++L+K+E+ K IGWG QIRSYV+ PY Sbjct: 242 VQCQNNRSQHQNKNEALKLLKGRLYQIKLEKKEQKMAEEYGKKCGIGWGNQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QMVKDLRT E + + + DG++D F+ L K Sbjct: 302 QMVKDLRTGYEVGNINSIFDGNIDCFIVNVLTNK 335 >gi|213019226|ref|ZP_03335033.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995335|gb|EEB55976.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 337 Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats. Identities = 170/337 (50%), Positives = 237/337 (70%), Gaps = 1/337 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 RL L+++ + +LWQ+ +A+ +++ER + + I +++ D++ L+ A++ Sbjct: 1 MKLRLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAID 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D E L +++ ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW ML+ Sbjct: 61 ENDEEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLM 120 Query: 139 RMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMYTRWAE FK E +E DG+ GIKS T+ I G AYGW K E GVHRLVRISP+D Sbjct: 121 RMYTRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFD 180 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPT Sbjct: 181 ANGKRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPT 240 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 GVV QCQ RSQHKNK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ Sbjct: 241 GVVAQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVM 300 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQMVKDLRT E + + V DG++D F+ + L +K Sbjct: 301 HPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 337 >gi|268679078|ref|YP_003303509.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM 6946] gi|268617109|gb|ACZ11474.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM 6946] Length = 364 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL+ +++ + + + +RL + +DP W + A + +E+ L++ ++ + Sbjct: 12 KLTTKVDNIAQIIKPEEIAKRLGEIEAIEQDPEFWNDAKRAAEMQKEKTALNSLLNRYTK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D + L E+A E+D + ++E ++ QR++ + + +LSGE D+ +A + + Sbjct: 72 AKNVVSDAVDLYEMANAENDETTIEELFNDAQRVEDHITNLEIAMMLSGENDTKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA++L RMY RWAE+ FK E L+ +GEEAGIK + +I G NAYG+L Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERSGFKVEVLDYQEGEEAGIKDVSFIISGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+D+N++RHTSFSS+ V P VDD I+I + + D ++DTYRASGAGGQ Sbjct: 192 KVENGIHRLVRISPFDANAKRHTSFSSVMVSPEVDDDIDIVLEDRDLKVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSA+RITH+PTG+VVQCQ +RSQHKN+A A ML+++LYELEL+K++ A Sbjct: 252 HVNKTDSAIRITHMPTGIVVQCQNDRSQHKNRASAMKMLKSRLYELELEKQQ--AEKDGI 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+NI + + +LDGD+ ++ L +K Sbjct: 310 EKSEIGWGHQIRSYVLAPYQQVKDNRSNIAYSQVNAILDGDISKVIEDVLIAQK 363 >gi|108798578|ref|YP_638775.1| peptide chain release factor 2 [Mycobacterium sp. MCS] gi|119867678|ref|YP_937630.1| peptide chain release factor 2 [Mycobacterium sp. KMS] gi|123070429|sp|Q1BBL5|RF2_MYCSS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|166225110|sp|A1UDD2|RF2_MYCSK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|108768997|gb|ABG07719.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. MCS] gi|119693767|gb|ABL90840.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. KMS] Length = 371 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 156/355 (43%), Positives = 221/355 (62%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D R+ L + DP+LW + A+ + E H N + ++E+ Sbjct: 12 LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSIL---QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + R+ D +L E+A EE+ E L ++++++E + +LLSGE D +A + Sbjct: 72 RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I++ E+D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL + Q+ + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLARKKQEERAELDAL 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + + Sbjct: 312 KGDGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 365 >gi|307297404|ref|ZP_07577210.1| peptide chain release factor 2 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916664|gb|EFN47046.1| peptide chain release factor 2 [Thermotogales bacterium mesG1.Ag.4.2] Length = 370 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 162/347 (46%), Positives = 230/347 (66%), Gaps = 2/347 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + D + ++L + + DP +W + EA L RE Q + I +++ Sbjct: 12 ELKEKFDSIRATLDLERIDEKLKEIEKRMSDPSIWNDQREASNLGREAQSYRSTIELLRD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ I +EL+ E D S ++ + ++ + +V + LLSGE D N+ ++ + Sbjct: 72 VEEEFESIEIAVELSGE--DESYVKHVEELVRSAEKKVREFELTILLSGEYDINNCFISI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+ML+RMY RWAE +FK ++ GEEAGIKS T+ + GP+AYG + Sbjct: 130 HPGAGGTESQDWASMLMRMYMRWAEANRFKITIVDELPGEEAGIKSVTINLAGPHAYGKM 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+N RRHTSF+S+ V+P +D+ EIEI D +IDTYR+ GAGGQ Sbjct: 190 KFEAGVHRLVRISPFDANHRRHTSFASVSVFPEMDEVPEIEIRPEDLKIDTYRSGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+PTG+VV CQ ERSQH+NKA A ML AKL+E+E++K+ Sbjct: 250 HVNKTDSAVRITHLPTGIVVACQTERSQHQNKANAMKMLYAKLFEIEIEKKRSEKLKLMG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + EI WG QIRSYV QPY +VKD RT+ E V++G++D+F++ Sbjct: 310 DQKEISWGNQIRSYVFQPYTLVKDHRTDFETGDIQSVMNGEIDEFIE 356 >gi|190571741|ref|YP_001976099.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190358013|emb|CAQ55482.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 335 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 170/334 (50%), Positives = 237/334 (70%), Gaps = 1/334 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L+++ + +LWQ+ +A+ +++ER + + I +++ D++ L+ A++E+D Sbjct: 2 RLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E L +++ ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW ML+RMY Sbjct: 62 EEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 TRWAE FK E +E DG+ GIKS T+ I G AYGW K E GVHRLVRISP+D+N Sbjct: 122 TRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFDANG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV Sbjct: 182 KRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 QCQ RSQHKNK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ PY Sbjct: 242 AQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QMVKDLRT E + + V DG++D F+ + L +K Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 335 >gi|152971837|ref|YP_001336946.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896431|ref|YP_002921169.1| peptide chain release factor 2 [Klebsiella pneumoniae NTUH-K2044] gi|262042532|ref|ZP_06015689.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330010996|ref|ZP_08306940.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3] gi|150956686|gb|ABR78716.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548751|dbj|BAH65102.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040092|gb|EEW41206.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534333|gb|EGF60944.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3] Length = 320 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 173/318 (54%), Positives = 220/318 (69%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ + + ++ L D LL+LA+E DD E L + Sbjct: 2 WNEPERAQALGKERSSLEAIVDTLDQMSQGLEDVAGLLDLAVEADDEETFNEAVAELDTL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++ +F + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE + Sbjct: 62 EEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEII 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E +GE AGIKS T+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP V Sbjct: 122 EESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 +D I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK Q Sbjct: 182 EDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ++AKLYELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDG LD F++A+L Sbjct: 301 QAVLDGSLDQFIEASLKA 318 >gi|319951472|ref|ZP_08025281.1| peptide chain release factor 2 [Dietzia cinnamea P4] gi|319434864|gb|EFV90175.1| peptide chain release factor 2 [Dietzia cinnamea P4] Length = 368 Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats. Identities = 156/352 (44%), Positives = 217/352 (61%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D D +R+ L DP LW + A+ + E ++ + +E+ Sbjct: 12 LDATMTTVEKVLDIDELARRVDELEQMAADPDLWNDQDRAQKVTSELSYIQADLRRCREL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ ELA EE ++E ++ +VE + +++LSGE D +A + + Sbjct: 72 RQRIEDLPLMYELAEEEG-GDAVEEADAERASLREDVEAMEVKTMLSGEYDQREAVVNIR 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAEK K E + EEAGIKSAT ++K P YG L Sbjct: 131 AGAGGVDAADFAEMLMRMYVRWAEKNGHKVEVYDTSYAEEAGIKSATFIVKDPYMYGTLS 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ IE+ E++ R+D YR+SG GGQ Sbjct: 191 VEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETVDSIEVPENEVRVDVYRSSGPGGQS 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E + + E A S Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLLERKR-QEERAAMDALGS 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + + Sbjct: 310 GGNASWGNQMRSYVLHPYQMVKDLRTEHEVNNPSAVLDGDIDGFIEAGIRWR 361 >gi|302865524|ref|YP_003834161.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC 27029] gi|315502072|ref|YP_004080959.1| peptide chain release factor 2 [Micromonospora sp. L5] gi|302568383|gb|ADL44585.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC 27029] gi|315408691|gb|ADU06808.1| peptide chain release factor 2 [Micromonospora sp. L5] Length = 373 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 160/353 (45%), Positives = 224/353 (63%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ + L + P LW + +A+ + + +++ I+ + ++ Sbjct: 13 LDATLRNIEAVLDLDKLREQKARLEQEASAPDLWDDQAKAQQVTSQLSYVNGEITKLGDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +LLELA EDD L E + + ++ + +LLSGE DS +A + + Sbjct: 73 RSRLDDAGVLLELAQAEDDPGALTEVESEITGLTKAIQEMEVRTLLSGEYDSREALVAIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PV + + I+I E++ R+D YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+A+L E + Q+ EE ++ Sbjct: 253 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQARLLERKRQEEEEKLAGLKTG 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T WG Q+RSYVL PYQMVKDLRT E +PS V DGDLD F++A + +K Sbjct: 313 STS-SWGDQMRSYVLHPYQMVKDLRTEQETGNPSSVFDGDLDSFIEAGIRWRK 364 >gi|134300908|ref|YP_001114404.1| peptide chain release factor 2 [Desulfotomaculum reducens MI-1] gi|134053608|gb|ABO51579.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfotomaculum reducens MI-1] Length = 332 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 156/319 (48%), Positives = 213/319 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W ++ ++ + ++ L + ++ ++ L D ++LEL EE D + +E S L Sbjct: 5 GFWDDLTYSQKVSQKLAGLKDRVAAFNTLESSLQDLEVMLELCQEEQDPLLEEEFSSELS 64 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + +E + E +L+G D DA L +H GAGGTESQDWA MLLRMYTR+ E +K E Sbjct: 65 TLTGRLEEMELEIMLAGPYDRGDAILSLHPGAGGTESQDWAQMLLRMYTRYCENHNYKVE 124 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 L++ G+EAGIKSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+ RRHTSF+S+ V P Sbjct: 125 ILDLLPGDEAGIKSATIQVTGPNAYGYLRCEKGVHRLVRISPFDAAGRRHTSFASVDVLP 184 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +VDD +E+ I D RIDTYRA GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ N+ Sbjct: 185 LVDDEVEVNIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQTTNR 244 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A +L++KL +LELQK+E+ + +I WG QIRSYV PY + KD RT E Sbjct: 245 QAAMKLLKSKLIDLELQKKEDEMAALRGEQKDIAWGSQIRSYVFHPYSLAKDHRTGEETG 304 Query: 334 SPSDVLDGDLDDFMKATLA 352 + + V+DG++ F+ A L Sbjct: 305 NVNAVMDGNIGQFVTAYLK 323 >gi|16804547|ref|NP_466032.1| peptide chain release factor 2 [Listeria monocytogenes EGD-e] gi|16411997|emb|CAD00587.1| prfB [Listeria monocytogenes EGD-e] Length = 327 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + +E Sbjct: 1 MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|310815685|ref|YP_003963649.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25] gi|308754420|gb|ADO42349.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25] Length = 375 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 193/352 (54%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + + D + A RL N + EDP LW N A+ LMR+RQ L + IS + + Sbjct: 12 IEKSITLVAQRMDRETASYRLEEFNARVEDPTLWDNPEAAQKLMRDRQVLLDKISNVDAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+E+ E D ++ E L+ ++ K+ E+LL GEAD ND +LE++ Sbjct: 72 ERDLRDNIELIEMGEAEGDDDVVAEAEAALRALRDVAGKKEIEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA++L RMY RWAEK+ + E GEEAGIKS + I G NAYGWLK Sbjct: 132 SGAGGTESCDWASILARMYVRWAEKKGYTVEMQSESPGEEAGIKSVSYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE+ + D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVQDKDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV Q +SQH+N+ A L+++LY++EL +R N S Sbjct: 252 VNTTDSAVRITHLPTGIVVTSSQ-KSQHQNRDIAMKALKSRLYQIELDRRNAAINEAHES 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 311 KGSAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDGFMAATLAMD 362 >gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S] gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707] gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S] gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707] Length = 367 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + + H + + ++E Sbjct: 11 ELDTTLTTVEKVLDVEELRRRIDELEHQASDPELWNDQEHAQQVTSQLSHAQSELRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L ELA EE + + +++ ++E + +++LSGE D DA + + Sbjct: 71 LRSRLDDMAVLYELAEEEG-PEAVADAHAERAQLRTDIEAMEVKTMLSGEYDQRDALVNI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ DWA ML+RMY RWAEKR + E + EEAGIKSAT +K P +YG L Sbjct: 130 RAGAGGVDAADWAEMLMRMYIRWAEKRGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+SG GGQ Sbjct: 190 SIEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A +L+AKL E + Q+ + + Sbjct: 250 SVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRQEERAEMDALKG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +PS VLDG++D F++A + + Sbjct: 310 DGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGEIDGFIEAGIRWR 361 >gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827] gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827] Length = 367 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 161/353 (45%), Positives = 222/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L + + D D +++ L + P LW + +A+ + + H + + + Sbjct: 12 LSATLASIEAVMDLDALRAQVAELEEQAARPDLWDDQEKAQRVTSQLSHKQGELRRVTAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA +E D E +++ E+ + +LLSGE D+ DA + V Sbjct: 72 RGRLDDLGVLYELAEDEGDEGSAAEADTERAKLREEISSLEVRTLLSGEYDARDALVTVR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A MLLRMY+RWAE+ + + + EEAGIKSAT + P AYG L Sbjct: 132 AEAGGVDAADFAEMLLRMYSRWAERHNYAVDVFDTSYAEEAGIKSATFRVTAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + +EI E + R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQTDHVEIDEKELRVDVYRSSGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A +L+AKL LE Q++EE A + Sbjct: 252 VNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQAKL--LERQRQEEQAKMDALK 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +PS VLDG++DDF++A + +K Sbjct: 310 DSGSSWGNQMRSYVLHPYQMVKDLRTEHEVGNPSAVLDGEIDDFLEAGIRWRK 362 >gi|171910508|ref|ZP_02925978.1| peptide chain release factor 2 [Verrucomicrobium spinosum DSM 4136] Length = 359 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 155/349 (44%), Positives = 218/349 (62%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD L L + P W N A+ + +L N I ++E++ RL Sbjct: 1 MAGSGGIFDVGKLKSDLETLEDELARPEFWDNQERARKTIDTVNNLKNRILPLEELERRL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L E+A E+D + E ++ + + LL+GE D A++ +H GAG Sbjct: 61 EDFFVLGEIAQHENDLASWTEVEKEYHAMEKALSDFELAMLLTGELDKKGAFVTIHCGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA+MLLRMY RW E+ +KTE ++ GEE G++SA + G A+G L E+G Sbjct: 121 GTESCDWADMLLRMYQRWCERSGYKTEMVDFAPGEEVGVRSAVFRVTGDYAFGKLNCERG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS RRHTSF+S+ V P VD+ I IE++E+D + +TYR+ G GGQ+VN Sbjct: 181 VHRLVRISPFDSAKRRHTSFASVDVTPEVDEDIGIELNEADIKFETYRSGGKGGQNVNKV 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVR+ H PTG++V CQ +RSQ KN+ A NML+AKLY+LE K++ K ++ Sbjct: 241 ETAVRLIHEPTGIIVNCQVQRSQGKNREMAMNMLKAKLYQLEQDKKKTEMERQYGEKGDV 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG QIRSYV QPYQMVKD RT + + +V+DGDLD F++A L +K Sbjct: 301 AWGSQIRSYVFQPYQMVKDHRTGEKTGNVGNVMDGDLDAFIEAKLRGRK 349 >gi|120402908|ref|YP_952737.1| peptide chain release factor 2 [Mycobacterium vanbaalenii PYR-1] gi|166225112|sp|A1T6D1|RF2_MYCVP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|119955726|gb|ABM12731.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium vanbaalenii PYR-1] Length = 368 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 158/352 (44%), Positives = 215/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L DP LW + A+ + + H + I+E+ Sbjct: 12 LDATLTTVERVIDVDGLRGRIEQLEKDASDPQLWDDQARAQKVTSDLSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA EE + E L +++ ++E + +LLSGE D +A + + Sbjct: 72 RGRLEDLPVLYELAAEEGGSDEVAEADAELTKLREDIEAMEVRTLLSGEYDEREALVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPYAYGNLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ +RR TSF+ + V PV + + IEI E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQNRRQTSFADVEVLPVTETTDHIEIPEGDVRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E + + + + Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEMDALKGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + + Sbjct: 312 GGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 362 >gi|304439754|ref|ZP_07399652.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371741|gb|EFM25349.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 368 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 175/353 (49%), Positives = 235/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ +N L D D +L LN K + W + A+ ++E H + I +K Sbjct: 14 EIESMVNSLIESMDIDGMKAKLRDLNDKQMEEGFWDDTESAQKTIKEFNHYNRKIENLKS 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D + LLE+ E D S ++ D+L +++ E + +LL+ + D ND L++ Sbjct: 74 LTDEISSLKDLLEIMEMEGDYSSYKDFKDDLIKLEKHAEDFKIATLLNDKYDDNDVILQI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDWA+MLLRMYTR+ E++ F E L++ +EAGIKSATLLIKG + YG+L Sbjct: 134 HAGAGGTEAQDWASMLLRMYTRYCEQKGFSAEILDLQKEDEAGIKSATLLIKGDSCYGYL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE+GVHRLVRISP+DSN RRHTSFSS+ VYP ++D +++I D +IDTYR+SGAGGQ Sbjct: 194 KGEKGVHRLVRISPFDSNKRRHTSFSSVDVYPELEDVEDVDIKPEDLKIDTYRSSGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTGVVVQCQ ERSQ +N+ A +L+AKL L ++++E Sbjct: 254 HVNTTDSAVRITHIPTGVVVQCQNERSQIQNRETAMKLLKAKLISLAQEEQKEAIEDLSG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + ++I WG QIRSYV QPY MVKD RTN E V+DG+LD F+ A L K Sbjct: 314 NYSQIAWGSQIRSYVFQPYTMVKDHRTNEEIGDVESVMDGNLDPFINAYLQSK 366 >gi|169630559|ref|YP_001704208.1| peptide chain release factor 2 [Mycobacterium abscessus ATCC 19977] gi|238688912|sp|B1MEU8|RF2_MYCA9 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|169242526|emb|CAM63554.1| Peptide chain release factor 2 (PrfB) [Mycobacterium abscessus] Length = 367 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 157/352 (44%), Positives = 219/352 (62%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L DP+LW + + + + H + ++E+ Sbjct: 12 LDTTLTTVERVLDVDGLRARIKTLEEAAADPNLWDDQARGQQVTSQLSHAQGELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA E +D S++ E +++ ++E + +LLSGE D +A + + Sbjct: 72 RSRLDDLPVLYELAEESEDNSVVAEADAERVKLREDIEAMEVRTLLSGEYDEREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAE K+ E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEAHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDLRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+A+L E + Q+ + + Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQARLLERKRQEERAEMDALKGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVLQPYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 312 GGS-SWGTQMRSYVLQPYQMVKDLRTEYEVGNPAAVLDGDIDGFIEAGIRWR 362 >gi|254458681|ref|ZP_05072105.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1] gi|207084447|gb|EDZ61735.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1] Length = 369 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 178/353 (50%), Positives = 235/353 (66%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L+ ++N + G+ + D RL + D W + A + +E+ L + Sbjct: 12 NLNLKMNNITGVVEPDKLTSRLEEIEELENDQDFWNDADNAAKIQKEKTQLQRKLDKYSI 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +D + D L L E+A EE+D ++ + ++ + + E LLSGE DSN+A L + Sbjct: 72 AKDAITDALELYEMAKEENDEDSIELCFSDASDLEQLILNMEVEVLLSGETDSNNAILSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY RWAE+ F E L+ G+EAGIK A++LIKG NAYG+L Sbjct: 132 HPGAGGTESQDWAEMLLRMYKRWAERHGFGVEVLDYQVGDEAGIKDASILIKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DSN++RHTSFSS+ V P +DD I I + + D RIDTYRASGAGGQ Sbjct: 192 KVENGIHRLVRISPFDSNAKRHTSFSSVMVSPEIDDDINIVVEDKDIRIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHI T V+VQCQ +RSQHKNKA A MLR++LYELEL + A I Sbjct: 252 HVNKTESAIRITHIATNVIVQCQNDRSQHKNKATAMKMLRSRLYELEL--AAQKAEIAGI 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K+EIGWG QIRSYV+QPYQ VKD R+N ++ S +LDGD+D ++ L + Sbjct: 310 AKSEIGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDKMIEGVLIAQ 362 >gi|298528152|ref|ZP_07015556.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira thiodismutans ASO3-1] gi|298511804|gb|EFI35706.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira thiodismutans ASO3-1] Length = 368 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 153/350 (43%), Positives = 226/350 (64%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 ++ + G D ++ QRL + + P W + + +++E+ L+ ++S +++ Sbjct: 17 QRFSSFWGRLDLESQKQRLEEIEHELSRPGAWDSPEKLTPILKEKSGLEESVSKYEQLHS 76 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + LE A + +LQ D+L+ + ++E + E+LLSG+ D+N A + +H G Sbjct: 77 LQEEVREWLEFADNDQSGEVLQALEDSLETLSRQLEKVELEALLSGKDDNNPAIVSIHPG 136 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDW MLLRMYTRWAE + FK + L+ G+EAG+KS TL + G AYG LK E Sbjct: 137 AGGTEAQDWVEMLLRMYTRWAESKGFKLDYLDYLPGDEAGVKSVTLQVTGEYAYGLLKSE 196 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +G+HRL+RISP+D++ RRHTSF+S+ VYP V D I IE+ E D R+D ++ASG GGQHVN Sbjct: 197 RGIHRLIRISPFDASGRRHTSFASVDVYPQVSDDINIEVKEEDMRVDVFKASGPGGQHVN 256 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SA+RITH+PTG+VVQCQ ERSQ +N+ A +L+AKLY+ E++K E+ ++K Sbjct: 257 KTSSAIRITHMPTGIVVQCQSERSQRRNRDAALKILKAKLYDEEMKKLEDERQEKYAAKD 316 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIR+Y L Y++VKD R N E VLDG++D ++ L + Sbjct: 317 SIAWGSQIRTYTLHSYRLVKDHRNNTEIYDVDSVLDGNIDTLIRNYLLYR 366 >gi|254973803|ref|ZP_05270275.1| peptide chain release factor 2 [Clostridium difficile QCD-66c26] gi|260681922|ref|YP_003213207.1| peptide chain release factor 2 [Clostridium difficile CD196] gi|260685520|ref|YP_003216653.1| peptide chain release factor 2 [Clostridium difficile R20291] gi|260208085|emb|CBA60326.1| peptide chain release factor 2 [Clostridium difficile CD196] gi|260211536|emb|CBE01711.1| peptide chain release factor 2 [Clostridium difficile R20291] Length = 338 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 161/329 (48%), Positives = 232/329 (70%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K W + A+ +++E + L + + ++ L D +L+E+ LEEDD S+ + Sbjct: 8 EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVER 67 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + +++ ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E Sbjct: 68 DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 127 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K + L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF Sbjct: 128 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 187 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E Sbjct: 188 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 247 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH NK +A +L AKL EL+ +++E + ++I WG QIRSYV QPY++VKD Sbjct: 248 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 307 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V++G++D F+ L + K Sbjct: 308 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 336 >gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183] gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183] Length = 378 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 161/355 (45%), Positives = 228/355 (64%), Gaps = 3/355 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D ++ L ++ DP LW + A+ + R +L+N ++ + Sbjct: 12 ELGSTLTGIEAVLDLDAMRAEIAKLREESADPDLWSDQERAQQVTRRLSYLENELNRVTS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D L ELA E DD E L+ ++ +++ + +L+SGE D +A + + Sbjct: 72 LRQRLEDVATLYELAEEMDDADTRAEADAELESLRKDIQQLEVRTLMSGEYDHREALITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +A AGG ++ DWA L RMY RWAE+ + TE E EEAGIKS T +K P AYG L Sbjct: 132 NAQAGGVDAADWAQQLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFAVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GE G HRLVRISP+D+ RR TSF+ + V PVV+ S +E+ E+D RID YR+SG GGQ Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGLDVVPVVEQSDHVEVDENDLRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A +L+AKL LE +++EE A + + Sbjct: 252 GVNTTDSAVRITHIPTGIVVSCQNERSQLQNKATAMAVLKAKL--LERKRQEEAAKMADL 309 Query: 302 S-KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG QIR+YVL PYQ+VKDLRT +E +P+ VLDG++D+F++A + + Sbjct: 310 RGEGTSSWGTQIRNYVLHPYQIVKDLRTGVESGNPAAVLDGEIDEFIEAEIRWLR 364 >gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp. 18P13] Length = 375 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 160/348 (45%), Positives = 233/348 (66%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 QL LG + A L L + W + +++ +M++ + L+N + + + + Sbjct: 17 QLKELGDVLQVARAQSELDDLRIQVTYDGFWDDAEKSQKVMQKIRKLENTVDKFRHLNQK 76 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D + L++L +EEDD S +E +++ K E+E ++ +LL+GE D ++A L HAGA Sbjct: 77 LEDTIALIDLCMEEDDDSSNEEILQDVESFKEELEAEKLSTLLTGEYDGSNAILTFHAGA 136 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA ML RMY RWAE+ FK L+ DG+EAG+KSA++L++G NAYG+LK E Sbjct: 137 GGTEAQDWAQMLYRMYNRWAERHDFKVSLLDYLDGDEAGLKSASMLVEGQNAYGFLKSEA 196 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR+SP+D++ RRHTSF+++ V P +DDS+E++I D ++D +R+SGAGGQH+N Sbjct: 197 GVHRLVRVSPFDASGRRHTSFAALEVMPEIDDSMEVDIRLEDVKMDVFRSSGAGGQHINK 256 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+THIPTG+VV CQ +RSQ +N+ A MLR+KL E++ ++ E + + + E Sbjct: 257 TSSAVRLTHIPTGIVVSCQTQRSQFQNRDFAMKMLRSKLVEIKEREHLEKISDIKGVQKE 316 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 I WG QIRSYV PY + KD RT E + S V+DGDLD F+ A L Sbjct: 317 IAWGAQIRSYVFMPYTLAKDHRTGFENGNISAVMDGDLDGFINAYLKA 364 >gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C] gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C] Length = 369 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E DD L E L ++ ++ + +LLSGE +A + + Sbjct: 73 RGRIDDLAVLFELAQEMDDADTLAEAEAELVSVRKALDEMEVRTLLSGEYAEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +EI ES+ R+D YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVEIDESELRVDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQARMDALK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363 >gi|170076819|ref|YP_001733457.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002] gi|169884488|gb|ACA98201.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002] Length = 359 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 149/345 (43%), Positives = 221/345 (64%), Gaps = 1/345 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD ++ L + P W++ A+ +++E L ++ ++ Q + D Sbjct: 10 RTIFDLKTLDAKIFDLEQQAAQPEFWEDQQGAQDILQELTELKGTVAQYQQWQGQFEDAA 69 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + EL E +D ++L E +NL ++ E+ + + +LSGE D+ A L ++AGAGGT++ Sbjct: 70 AIAELLTEAEDPALLTEAMENLDDLQKELNRWELQQMLSGEYDNLGAVLTINAGAGGTDA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW+EK+ +K EI +G+EAG+KSATL + G A+G+LK E+G HRL Sbjct: 130 QDWAEMLLRMYTRWSEKQGYKVRLAEISEGDEAGLKSATLEVTGRYAFGYLKHEKGTHRL 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VRISP+++N +R TSF+ + V P++ D+ ++++I E D I T RA G GGQ+VN ++A Sbjct: 190 VRISPFNANGKRQTSFAGVEVMPILGDNAVKVDIPEKDLEITTSRAGGKGGQNVNKVETA 249 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+PTGV V+C QERSQ +NK +A +L+AKL + ++R + E WG Sbjct: 250 VRIVHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRAQEIAEIRGDMVEAAWG 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIR+YV PYQMVKDLRTN E T V+DGDLD F++A+L Sbjct: 310 NQIRNYVFHPYQMVKDLRTNHETTDVDGVMDGDLDAFIEASLRQD 354 >gi|256828464|ref|YP_003157192.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium baculatum DSM 4028] gi|256577640|gb|ACU88776.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium baculatum DSM 4028] Length = 369 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 162/350 (46%), Positives = 222/350 (63%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + D +RL+ + + P W +++E+ L++ + + Sbjct: 13 QLDERFTDFWRRLDLRRNKERLNEIEKQISSPGAWDKPELLTPVLQEKTQLESRVDEWEA 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + L +E+A E +LQ + L+ + ++E Q +LLS D ++A LE+ Sbjct: 73 LLQARDNALEWVEMASTEQTQEMLQALEEALEEMSAKLEAAQMRTLLSDPEDVSEAILEI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY R+AE+ FK E L++ G+EAGIKS TL I GP AYG L Sbjct: 133 HPGAGGTESQDWAEMLLRMYRRFAERVGFKVELLDLLPGDEAGIKSVTLHIHGPYAYGQL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE+G HRL+RISP+DS+ RRHTSF+S+ VYP IEIEI + D R+D +R+SG GGQ Sbjct: 193 KGEKGTHRLIRISPFDSSGRRHTSFASVDVYPDAGQDIEIEIRDEDVRVDIFRSSGPGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+V QCQ E+SQHKNK A +L+A+LYELELQK Sbjct: 253 SVNTTDSAVRVTHIPTGLVAQCQNEKSQHKNKEAAMKVLKARLYELELQKIASERQAEYV 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K I +G QIR+Y LQPY++VKD RT + ++ VLDG++D F+ L Sbjct: 313 AKGAIAFGSQIRTYTLQPYRLVKDHRTGTDTSNVDSVLDGNIDAFIHNYL 362 >gi|313113161|ref|ZP_07798787.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624500|gb|EFQ07829.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii KLE1255] Length = 373 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 151/349 (43%), Positives = 218/349 (62%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + + L D + +R+ L P + + +K + E L +S +++Q Sbjct: 16 KAVKDLEEALAIDASRKRVQELEHTMSRPGFYDDADLSKKVFDEVGDLKGKLSRFEKLQG 75 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 D +LE+ EE D +++ E +++ + V+ Q ++L+GE D ++A L HAG Sbjct: 76 LYDDAETMLEMLDEEYDPAMIPEAEESVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAG 135 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GGTE+QDWA ML RMY +WA E L+ DG+EAG+KSA++++KG NAYG LK E Sbjct: 136 TGGTEAQDWAEMLYRMYNKWASNHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSE 195 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++IS D + YR+SGAGGQH+N Sbjct: 196 NGVHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDISPEDIEMQVYRSSGAGGQHIN 255 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVR+ H PTGVVV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + Sbjct: 256 KTSSAVRLIHKPTGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQN 315 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EI WG QIRSYV PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 316 EIAWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364 >gi|254900353|ref|ZP_05260277.1| peptide chain release factor 2 [Listeria monocytogenes J0161] Length = 327 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + +E Sbjct: 1 MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|288905693|ref|YP_003430915.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34] gi|306831789|ref|ZP_07464945.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978722|ref|YP_004288438.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732419|emb|CBI13991.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34] gi|304425987|gb|EFM29103.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178650|emb|CBZ48694.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 336 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 152/336 (45%), Positives = 215/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + I A+ +E L E+Q+ + + LE+ Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D S+ E ++L+++ + + LLS D N+A LE+H G+GGTE+QDWA+ML Sbjct: 59 DEDDSVQAELEESLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSFSS+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFSSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD+D F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWR 334 >gi|188590075|ref|YP_001919915.1| peptide chain release factor 2 [Clostridium botulinum E3 str. Alaska E43] gi|188500356|gb|ACD53492.1| peptide chain release factor 2 [Clostridium botulinum E3 str. Alaska E43] Length = 344 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 161/343 (46%), Positives = 230/343 (67%), Gaps = 1/343 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + ++LS L + ++ W + A+ + +E + + + I ++ +Q +L D +L Sbjct: 3 LFDKEYLEKQLSELEFQMQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVL 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+ +++DD E +N++ I+ E++ E LLSGE D N+A L +H G GGT++ D Sbjct: 63 KEM-MDDDDEESAYEIINNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDAND 121 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W MLLRMYTRW EK+ +K E +++ +G+EAGIKS TL + G AYG+LK E+G+HRLVR Sbjct: 122 WTEMLLRMYTRWCEKKNYKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVR 181 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+S+ V P + +I+I D ++DTYRASGAGGQH+N TDSAVRI Sbjct: 182 ISPFNANGKRQTSFASMEVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRI 241 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTGVVVQCQ ERSQ NK A ML+AKL EL+ + +E ++GWG QI Sbjct: 242 THIPTGVVVQCQNERSQFSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQI 301 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RSYV PY +VKD RTN+E ++ + V+DGDLD F+ + L K Sbjct: 302 RSYVFHPYNLVKDHRTNVEVSNVTAVMDGDLDLFINSYLKSSK 344 >gi|302524557|ref|ZP_07276899.1| peptide chain release factor 2 [Streptomyces sp. AA4] gi|302433452|gb|EFL05268.1| peptide chain release factor 2 [Streptomyces sp. AA4] Length = 376 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 223/353 (63%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L + + D + +++ L + P LW NV EA+ + + H + + E+ Sbjct: 21 LTGKLTQIESVMDLEALRAQVAELEEQASSPTLWDNVEEAQKVTSQLSHRQAELRRVSEL 80 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA +E D + E +L + +++ + +LLSGE D +A + + Sbjct: 81 RQRLDDLGVLYELAADEGDSGSMTEAEGDLADLAKDIDALEVRTLLSGEYDDRNAVVNIR 140 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ + T+ +I EEAGIKSAT + P YG L Sbjct: 141 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVFDISYAEEAGIKSATFKVTAPYVYGTLS 200 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V P V++ ++I E D R+D YR+SG GGQ Sbjct: 201 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDIPEKDIRVDVYRSSGPGGQS 260 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+A+L L+ +K EE A + Sbjct: 261 VNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKAAAMKVLQARL--LQRKKEEERAEMDALK 318 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + +K Sbjct: 319 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPTAVLDGDIDGFLEAGIRWRK 371 >gi|255091190|ref|ZP_05320668.1| peptide chain release factor 2 [Clostridium difficile CIP 107932] gi|255099304|ref|ZP_05328281.1| peptide chain release factor 2 [Clostridium difficile QCD-63q42] gi|255305089|ref|ZP_05349261.1| peptide chain release factor 2 [Clostridium difficile ATCC 43255] gi|255312847|ref|ZP_05354430.1| peptide chain release factor 2 [Clostridium difficile QCD-76w55] gi|255515606|ref|ZP_05383282.1| peptide chain release factor 2 [Clostridium difficile QCD-97b34] gi|255648700|ref|ZP_05395602.1| peptide chain release factor 2 [Clostridium difficile QCD-37x79] gi|306518820|ref|ZP_07405167.1| peptide chain release factor 2 [Clostridium difficile QCD-32g58] Length = 339 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 161/329 (48%), Positives = 232/329 (70%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K W + A+ +++E + L + + ++ L D +L+E+ LEEDD S+ + Sbjct: 9 EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVER 68 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + +++ ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E Sbjct: 69 DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 128 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K + L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF Sbjct: 129 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 188 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E Sbjct: 189 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 248 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH NK +A +L AKL EL+ +++E + ++I WG QIRSYV QPY++VKD Sbjct: 249 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 308 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V++G++D F+ L + K Sbjct: 309 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 337 >gi|256832101|ref|YP_003160828.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603] gi|256685632|gb|ACV08525.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603] Length = 369 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 147/354 (41%), Positives = 224/354 (63%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +++ L+ + P LW + +A+ + N + I+ Sbjct: 11 QLRATLATISAVSDPEALTAKIAELSDQASAPDLWDDPAQAQQVTSALSLAQNELKRIES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q R+ D +L+E+A+E +D L E D IK +++ + +LLSGE D+ +A + + Sbjct: 71 MQQRIDDLEVLVEMAVEGNDADTLHEAEDEYAAIKKDLDQLEVRTLLSGEYDAREAVVTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 131 RAGAGGVDAADFAEMLLRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI +++ R+D +R+SG GGQ Sbjct: 191 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHVEIPDNEIRVDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L LE Q E+ + Sbjct: 251 SVNTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LERQAEEKAKKKELA 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E + + V DG +DDF++A + ++ Sbjct: 310 GDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTNAVFDGHIDDFIEAGIRWRR 363 >gi|254469263|ref|ZP_05082668.1| peptide chain release factor 2 [Pseudovibrio sp. JE062] gi|211961098|gb|EEA96293.1| peptide chain release factor 2 [Pseudovibrio sp. JE062] Length = 322 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 215/309 (69%), Positives = 260/309 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD++I+ +++++ L DN L+E+ EDD S++ E L+ + +V Q + Sbjct: 1 MRERQQLDDSINGVRKLEQDLVDNQELIEMGEMEDDQSVVDEAEGALKAMLEQVNKLQLQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND Y+E+++GAGGTESQDWA+MLLRMY RW E+ +K E +E +DGEEAGI Sbjct: 61 SLLSGEADGNDTYIEINSGAGGTESQDWASMLLRMYRRWGEQHGYKVELMEYNDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLL+KG NAYGW+K E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DDSI IEI+E Sbjct: 121 KSATLLVKGENAYGWMKTEAGVHRLVRISPYDSNARRHTSFASVWVYPVIDDSINIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +DCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+MLRA+LY Sbjct: 181 ADCRIDTYRASGAGGQHVNTTDSAVRITHNPTGIVVQCQSERSQHKNRATAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ+REE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E T+PSDVLDGDLD Sbjct: 241 EAELQRREEQANKDAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTAPSDVLDGDLDK 300 Query: 346 FMKATLAIK 354 FM+ATLA + Sbjct: 301 FMEATLAHR 309 >gi|227877191|ref|ZP_03995265.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01] gi|256848945|ref|ZP_05554379.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US] gi|262045712|ref|ZP_06018676.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US] gi|293380190|ref|ZP_06626272.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1] gi|295692545|ref|YP_003601155.1| peptide chain release factor 2 [Lactobacillus crispatus ST1] gi|227863245|gb|EEJ70690.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01] gi|256714484|gb|EEU29471.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US] gi|260573671|gb|EEX30227.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US] gi|290923234|gb|EFE00155.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1] gi|295030651|emb|CBL50130.1| Peptide chain release factor 2 [Lactobacillus crispatus ST1] Length = 332 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 201/324 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W N +A+ L+ E L ++Q D +EL EE D + +E Sbjct: 1 MAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYEDETTAVELLREEPDPDLQKEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L ++ + + + LLSG+ DS++A +E+H GAGGTE+ DW MLLRMY R+ + Sbjct: 61 ADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDTAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS + I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VDDSI+I+I D R+D YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E V+DG L F+ + L Sbjct: 301 HETADAQGVMDGKLQPFIYSYLQW 324 >gi|260584689|ref|ZP_05852435.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633] gi|260157712|gb|EEW92782.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633] Length = 331 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 157/324 (48%), Positives = 214/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+M++++ L +++ ++ + +L E+ E+ + I E Sbjct: 1 MSEPGFWDDNEKAQMVIQKSNELKAVYDTFHQLELQVEEVELLFEMYKEDPEEEIHDELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ E+E + LLSG D A LE+H GAGGTESQDW +MLLRMYTRWAE+ Sbjct: 61 ERVHSVEKELEKYELSMLLSGPHDKCSAILEIHPGAGGTESQDWGSMLLRMYTRWAEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E ++ DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+D+ +RHTSF SI Sbjct: 121 YRIETVDYQDGEEAGIKSVTLSIEGLNAYGYLKSEKGVHRLVRISPFDAAGKRHTSFCSI 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P ++ I+IEI+ D +ID YRASGAGGQH+N T SAVRITHIPTG+V Q Q +RSQ Sbjct: 181 DIMPQLEGDIDIEINPDDLKIDVYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KNK QA ML+ KLY+LE +K+ + +I WG QIR+YV PY +VKDLR+ Sbjct: 241 FKNKDQAMAMLKTKLYQLEEEKKAAELAEIRGEQKDIAWGSQIRNYVFHPYSLVKDLRSG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DGDLD FM A L Sbjct: 301 HETGNIGAVMDGDLDPFMDAYLKW 324 >gi|257877567|ref|ZP_05657220.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20] gi|257811733|gb|EEV40553.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20] Length = 329 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ ++ + L + ++LE+ EE D + E Sbjct: 1 MADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ ++ + LL D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+ Sbjct: 61 ARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +I++EI+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L +K Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|52425597|ref|YP_088734.1| peptide chain release factor 2 [Mannheimia succiniciproducens MBEL55E] gi|52307649|gb|AAU38149.1| PrfB protein [Mannheimia succiniciproducens MBEL55E] Length = 325 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 171/324 (52%), Positives = 229/324 (70%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P +W +A+ L +ER L+ ++ IK++ L D LLELA+E +D E Sbjct: 1 MEQPDVWNEPEKAQALGKERSALETVVNTIKKLDQGLEDVDGLLELAVEGEDEETFNEAV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ ++ +F + SGE D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + Sbjct: 61 TELDELEQQLAKLEFRRMFSGEHDACDCYIDLQAGSGGTEAQDWTEMLLRMYLRWAESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ Sbjct: 121 FKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAA 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 ++YP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQ Sbjct: 181 FIYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK Q L+AKLYE+ELQK+ E SK++IGWG QIRSYVL +KDLRT Sbjct: 241 HKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDGDLD F++A+L Sbjct: 300 VENRNTQAVLDGDLDRFIEASLKA 323 >gi|182624026|ref|ZP_02951814.1| peptide chain release factor 2 [Clostridium perfringens D str. JGS1721] gi|177910919|gb|EDT73273.1| peptide chain release factor 2 [Clostridium perfringens D str. JGS1721] Length = 323 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 153/322 (47%), Positives = 219/322 (68%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I K + +R+ D +L EL +EE+D +E Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKEL-MEENDEETAKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK++ Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKE 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ + V+DGD+D+F+ A L Sbjct: 300 FETSNVNGVMDGDIDNFIIAYL 321 >gi|71908457|ref|YP_286044.1| peptide chain release factor 2 [Dechloromonas aromatica RCB] gi|71848078|gb|AAZ47574.1| bacterial peptide chain release factor 2 (bRF-2) [Dechloromonas aromatica RCB] Length = 325 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 163/323 (50%), Positives = 227/323 (70%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 EDP +W + A+ L RE++ L+N + ++E+Q L D L ++ E+ D L Sbjct: 1 MEDPKIWDDAKRAQELGREKKSLENIVLVLEEVQSGLNDGRELFDMGKEDGDEDTLLSVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ +V +F + + +D +LE+ AGAGGTE+QDWA+MLLRMY ++ EK+ Sbjct: 61 ADNAELEKKVAALEFRRMFNNPSDPMPCFLEIQAGAGGTEAQDWASMLLRMYLKYGEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E +E +G+ AG+KSAT+ G AYG L+ E G+HRLVR SP+DSN+RRHTSF+S+ Sbjct: 121 FTVEVMEESEGDVAGLKSATVKFTGDYAYGTLRTETGIHRLVRKSPFDSNARRHTSFTSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V+P VDDSIEI I+ +D R DTYRASGAGGQH+N TDSAVR+TH+PTG+VVQCQ +RSQ Sbjct: 181 FVFPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHVPTGIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+N+ +AW MLRA++YE EL+K++ E +K++IGWG QIRSYVL +KDLRTN Sbjct: 241 HRNRDEAWQMLRARIYEFELRKQQAEQQKLEDAKSDIGWGHQIRSYVL-DQSRIKDLRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + VLDGDLD F++A+L Sbjct: 300 HETGNTQAVLDGDLDPFIEASLK 322 >gi|238854884|ref|ZP_04645214.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3] gi|260664171|ref|ZP_05865024.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US] gi|282931596|ref|ZP_06337089.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] gi|313472385|ref|ZP_07812877.1| peptide chain release factor 2 [Lactobacillus jensenii 1153] gi|238832674|gb|EEQ24981.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3] gi|239529755|gb|EEQ68756.1| peptide chain release factor 2 [Lactobacillus jensenii 1153] gi|260562057|gb|EEX28026.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US] gi|281304207|gb|EFA96316.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] Length = 332 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 154/325 (47%), Positives = 208/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N A+ L+ L ++ D LEL EE D + E Sbjct: 1 MADPDFWNNQESAQKLISATNKLKEKRDHFNDLAQAFSDEEAALELLKEESDTDLQAEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+ +K + LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E Sbjct: 61 SDLESLKDSFHQYELNLLLSGKYDTNNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E + G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FTFEIDDYEPGDEAGVKSVSVLIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A N LRAKL++LE +K+ + + + +I WG QIRSYV PY MVKD RTN Sbjct: 241 FQNKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + + V+DG LD+ + + L + Sbjct: 301 FETSDVNGVMDGKLDNLIYSFLQWR 325 >gi|312792717|ref|YP_004025640.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179857|gb|ADQ40027.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 372 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 170/349 (48%), Positives = 232/349 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D D L L +T P WQ++ ++ ++++ + L + I +++ Sbjct: 15 EEDLKEMRVSLDIDRLESELKSLENETSSPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL+L+E + + +E L ++ ++E + E LL+G D N+A L +HA Sbjct: 75 SQWEDLKVLTELSLDEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHV Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363 >gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680] gi|81717933|sp|Q82D82|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis MA-4680] Length = 368 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L +K ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLSVLFEMAEEEDDPDTRAEAESELTAVKKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVETTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL + Q+ + + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLDRRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G+++ F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364 >gi|224125026|ref|XP_002319484.1| predicted protein [Populus trichocarpa] gi|222857860|gb|EEE95407.1| predicted protein [Populus trichocarpa] Length = 488 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 155/352 (44%), Positives = 227/352 (64%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W + RL L+ + P LW + + A + RE L + ++ + Sbjct: 124 IAQSIQVIKRRLQWKKLMVRLDLLSVQLNKPDLWDDPVHAGKISREHGSLMAKMKKVRTL 183 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EEDD + E L +++ K+ E+LLSGE DS Y+EV Sbjct: 184 EQELLEHIDMIKLAREEDDNELESEMLKALLQMRRNSNEKEQEALLSGEQDSCPCYIEVQ 243 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M+++MY WA++ + ++ GE AGIK AT+ + G A+G+ K Sbjct: 244 AGAGGTESMDWAKMVMQMYKSWAQRHGYGVTVVDEMPGEIAGIKRATIKVDGEYAFGYAK 303 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P++ D + I+ESD RI+ +RA GAGGQ Sbjct: 304 AEAGVHRLVRISPFDSGKRRHTSFAAVAVIPILRDGFTHVPINESDLRIERFRAGGAGGQ 363 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRI HIPTG+ CQ ERSQH NK A +L+++L + E+ ++ ++ Sbjct: 364 HVNTTESAVRIVHIPTGITATCQNERSQHMNKDSAMAVLQSRLDQREMARQAQMNAYHTQ 423 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S T+IGWG QIRSYVL PY+MVKDLRTN E T+P VL+G++D F+ + L+ Sbjct: 424 SLTDIGWGNQIRSYVLHPYRMVKDLRTNYEVTNPDSVLEGEIDGFILSYLSA 475 >gi|319779400|ref|YP_004130313.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9] gi|317109424|gb|ADU92170.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9] Length = 327 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 167/324 (51%), Positives = 239/324 (73%), Gaps = 1/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + EDP++W + +A+ L +E++ L++ + + E++ + D+ L LALE++D S L Sbjct: 2 ELEDPNIWNDPEKAQSLSKEKKSLEDVVIVLSELEQSIRDSKDLYTLALEDNDDSTLIAI 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ ++ ++E +F + S AD + ++++ GAGGTE+QDWA+MLLR Y R+ E++ Sbjct: 62 EEDSKKYLEKIEGLEFRRMFSQPADPLNCFIDIQFGAGGTEAQDWASMLLRQYLRYCERK 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FKTE LE G+ AGIKSAT+ ++G A+G L+ E GVHRLVR SP+DS + RHTSF+S Sbjct: 122 GFKTEVLEESAGDVAGIKSATIKVEGDYAFGLLRTESGVHRLVRKSPFDSANGRHTSFAS 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VVQCQ +RS Sbjct: 182 LYVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+NKA+A +ML++KLYELEL+KR E SK+++GWG QIRSYVL +KDLRT Sbjct: 242 QHRNKAEAMSMLKSKLYELELRKRMAEQQKLEESKSDVGWGHQIRSYVL-DQSRIKDLRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 N+E ++ VLDGDLD F++A+L Sbjct: 301 NVEVSNTQKVLDGDLDMFIEASLK 324 >gi|163816074|ref|ZP_02207444.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759] gi|158448884|gb|EDP25879.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759] Length = 370 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 169/350 (48%), Positives = 229/350 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D +N R++ LN + E P W +V ++ + RE ++L + + K+++ Sbjct: 15 KEPLEEVKSSLDIENKTDRIAKLNYEMEQPSFWDDVDRSREVSRELKNLQDLVDNYKKLE 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D L+ +A EE+D S++ E + + K E E + L + E D +A L +H+ Sbjct: 75 NDYLDIDTLILMAEEENDSSLIPEIGEQIDIFKKEFEEYRINLLFTDEFDDCNAVLTLHS 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GGTES DWA+ML RMYTRWAEK E L+ +G+EAGIKS T+ I GP+AYG+LK Sbjct: 135 GEGGTESCDWASMLYRMYTRWAEKHGMSVEVLDFLEGDEAGIKSVTIQINGPHAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP++S +R TSF+S V P ++ +EIEI + D RIDTYR+SGAGGQH+ Sbjct: 195 EKGVHRLVRISPFNSAGKRMTSFASCDVIPDIEQDLEIEIRDEDIRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITH PTG+VVQCQ ERSQ NK +A ML++KLY L+ Q+ E + Sbjct: 255 NKTSSAIRITHFPTGIVVQCQNERSQLMNKNKAMQMLKSKLYLLKKQENLERISDIRGEV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 T+ G+G QIRSYVLQPY MVKD RT+ E ++ S VLDGDLD FM A L Sbjct: 315 TDNGFGSQIRSYVLQPYTMVKDKRTSYENSNVSAVLDGDLDGFMTAYLKW 364 >gi|227549373|ref|ZP_03979422.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM 44291] gi|227078558|gb|EEI16521.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM 44291] Length = 365 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 157/354 (44%), Positives = 224/354 (63%), Gaps = 6/354 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L L + + D D R L + DP LW + A+ + E ++ + + Sbjct: 11 NLDSTLTTIEKVIDLDELAARARELEQQANDPSLWDDPAHAQKVTTELSNVQARLKKVAS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++R+ D ++ ELA EE + +++ D L ++ + + +++LSGE D +A + + Sbjct: 71 LRERIDDLPVMYELAEEEGEPALVD---DELAALEESIGSLEVQTMLSGEYDEREAVVNI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K E +I EEAGIKSAT +++G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVRGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I +SD R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDSDIRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GE 300 VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A +L++KL LE +++EE A + Sbjct: 248 SVNTTDSAVRITHLPTGIVVTCQNEKSQIQNKASALGVLQSKL--LERKRQEEKAEMDAL 305 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D F+++ + + Sbjct: 306 GAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWR 359 >gi|227832559|ref|YP_002834266.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC 700975] gi|262183572|ref|ZP_06042993.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC 700975] gi|254790912|sp|C3PES4|RF2_CORA7 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|227453575|gb|ACP32328.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC 700975] Length = 368 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 218/353 (61%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS L + + D + +R+ L + DP LW + A+ + E + + Sbjct: 11 ELSATLTSIEKVMDPEAVSERVRELEAQAGDPSLWDDPDHAQKVTSELSAQQAKLRKLNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ ELA EE D + + L+ + +E + ++LSGE D +A + + Sbjct: 71 LRGRIEDLPVMSELAEEEGDEASQELVETELKELGAAIESLEVTTMLSGEYDEREAVINI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IE+ +S+ R+D YR+SG GGQ Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDSEVRVDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAELDALG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F+++ + + Sbjct: 310 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLESGIRWR 362 >gi|109897685|ref|YP_660940.1| peptide chain release factor 2 [Pseudoalteromonas atlantica T6c] gi|109699966|gb|ABG39886.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudoalteromonas atlantica T6c] Length = 348 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 184/346 (53%), Positives = 239/346 (69%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ GG FD+D +RL +N + E P +W A+ L +E+ L+ + I ++ Sbjct: 1 MHRFGGTFDYDQKNERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLEQGC 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + LLELA+EE D L E +L + +E +F + SG D+ND Y+++ +G+G Sbjct: 61 VEVEELLELAVEESDQETLDEAEKDLAELVSRLETLEFRRMFSGPNDANDGYIDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+MLLRMY RW E FKTE +E+ DG+ AGIKSAT+ +G A+GWL+ E G Sbjct: 121 GTEAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS SRRHTSF+S++ YP +DD IEI+I SD RIDTYRASGAGGQHVN T Sbjct: 181 VHRLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHVNRT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH PT +VVQCQ +RSQHKNKAQA L+AKLYE E+QK+ E E SK++I Sbjct: 241 DSAVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQTMEDSKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 GWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLDKFIQASLK 345 >gi|312126885|ref|YP_003991759.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor hydrothermalis 108] gi|311776904|gb|ADQ06390.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor hydrothermalis 108] Length = 370 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 171/349 (48%), Positives = 233/349 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D D L L ++T P WQ++ ++ ++++ + L + I +++ Sbjct: 13 EEDLKEMRVSLDIDRLESELKSLESETSRPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 72 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL+LEE + + +E L ++ ++E + E LL+G D N+A L +HA Sbjct: 73 SQWEDLKVLTELSLEEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 132 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 133 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 192 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHV Sbjct: 193 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 252 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 253 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 313 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 361 >gi|320547182|ref|ZP_08041476.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812] gi|320448169|gb|EFW88918.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812] Length = 336 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 154/336 (45%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + I A+ +E L E+Q+ + + LE+ Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNSLKQTYETFNEMQELSDETELYLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D SI E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA+ML Sbjct: 59 DEDDSIQSELEETLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSFSS+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFSSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD+D F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334 >gi|320106646|ref|YP_004182236.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4] gi|319925167|gb|ADV82242.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4] Length = 375 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 179/352 (50%), Positives = 234/352 (66%), Gaps = 2/352 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ L D + L+ + ++ DP +W + ++ LMRER+ L+ +S +++ Sbjct: 13 RARVRDLREYLDSTRLKKDLARIEEQSSDPAIWADPARSQPLMRERKRLEGLLSDDADLE 72 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 R D EL E ++ E + + I+ +E + ++LS E D +A + VH Sbjct: 73 RRSGDIDAYFELGREGENVE--PELAREIASIEQAIEKLESRTMLSEETDPLNAIVTVHP 130 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDWA ML+RMY RW E++ FKTE EI DG+EAGIKSAT I G AYG L G Sbjct: 131 GAGGTESQDWAEMLMRMYLRWGERQGFKTEINEIQDGDEAGIKSATFTITGDFAYGLLSG 190 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+DS RRHTSFSS++V P +DDSI I+I D RIDTYR+ G GGQHV Sbjct: 191 ETGVHRLVRISPFDSAKRRHTSFSSVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHV 250 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PTG+V CQ ERSQHKNK +A MLR++LYE EL K++ I+ E SK Sbjct: 251 NTTDSAVRITHLPTGIVAGCQNERSQHKNKDKAMKMLRSRLYEFELDKKKAISRKLEDSK 310 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 EI +G QIRSYVLQPY+M KDLRT +E VLDGDL+ F++ L +++ Sbjct: 311 LEINFGSQIRSYVLQPYRMAKDLRTRVEVGDVDRVLDGDLEPFIRGFLRMRR 362 >gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000] gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000] Length = 368 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 218/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPEEAQKITSKLSHLQAEVRKAEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L +K ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAESELTLVKKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE +E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTELIETSYAEEAGIKSTTFSVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364 >gi|296089769|emb|CBI39588.3| unnamed protein product [Vitis vinifera] Length = 472 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 232/352 (65%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++ + W V RL L+ + P LW N + A + RE L + +K + Sbjct: 110 IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 169 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EE+D + E+ L ++ + K+ E+LL+G+ DS Y+EV Sbjct: 170 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 229 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M+++MY WA++R + ++ GE AGIK AT+ + G ++G+ K Sbjct: 230 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 289 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P++ D S ++I+ESD RI+ +RA GAGGQ Sbjct: 290 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 349 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRI HIPTGV CQ ERSQH+NKA A +L+++L +LE+ ++ +I Sbjct: 350 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 409 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S T+I WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 410 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 461 >gi|329896805|ref|ZP_08271721.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088] gi|328921560|gb|EGG28940.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088] Length = 321 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 168/317 (52%), Positives = 224/317 (70%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ L +ER L+ + I+ + + D LL+L + E+D L++ +Q++ Sbjct: 2 WDDPERAQALGKERAALEAIVVSIETLTEGANDTADLLDLVVAENDVDSLEDIKSEIQKL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 ++ +F + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RW E + FKTE + Sbjct: 62 LAILDELEFRRMFSGEVDENNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEAKGFKTELI 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P + Sbjct: 122 ECSAGEVAGIKSATIKFDGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH+PTGVVVQCQ ERSQH+N+ Sbjct: 182 DDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGVVVQCQTERSQHQNRDN 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A +LR KLYELE+ KR E E SK +IGWG QIRSYVL +KDLRT +E ++ Sbjct: 242 AMKLLRGKLYELEMLKRSEKQQALEDSKADIGWGSQIRSYVL-DQSRIKDLRTGVETSNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDG +D F++A+L Sbjct: 301 QAVLDGAIDMFIQASLK 317 >gi|119960719|ref|YP_948373.1| peptide chain release factor 2 [Arthrobacter aurescens TC1] gi|119947578|gb|ABM06489.1| peptide chain release factor 2 [Arthrobacter aurescens TC1] Length = 398 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 141/352 (40%), Positives = 218/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D D ++ L+ + P LW + A+++ H + + + ++ Sbjct: 39 LRATYSSIENVTDVDALKTEIAELSEQAGAPDLWDDPASAQVITSRLSHRQSEVERLSKL 98 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+EL +E D + E + L I+ + + +LLSGE D +A + + Sbjct: 99 ASRIDDLEVLVELGQDEGDEDSMAEAAKELSSIRKALAELEITTLLSGEYDEREAVVTIR 158 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T ++ EEAG+KSAT +K P A+G L Sbjct: 159 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLS 218 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI +++ R+D +R+SG GGQ Sbjct: 219 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQS 278 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L +++++ + Sbjct: 279 VNTTDSAVRLTHIPTGIVVSMQNEKSQLQNRAAAMRVLQSRLL-LVKKEQQDAEKKALAG 337 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + S VLDGD+DDF+ A + + Sbjct: 338 DVKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVLDGDIDDFIDAGIRWR 389 >gi|238063024|ref|ZP_04607733.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149] gi|237884835|gb|EEP73663.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149] Length = 373 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 160/355 (45%), Positives = 224/355 (63%), Gaps = 3/355 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D + + L + P LW + +A+ + + +++ I + Sbjct: 12 ELDAILRNIEAVLDLDRLHEDKARLEEQASAPDLWDDQAKAQQVTSQLSYVNGEIDKLGS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +LLELA EDD +L E + + ++ + +LLSGE DS +A + + Sbjct: 72 LRSRLDDARVLLELAEAEDDPGVLAEVETEIGALTKSIQDMEVRTLLSGEYDSREALVAI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 132 RAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFAVKVPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PV + + I+I E++ R+D YR+SG GGQ Sbjct: 192 SVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+A+L LE +++EE A + Sbjct: 252 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKLNGL 309 Query: 302 SKTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G WG Q+RSYVL PYQMVKDLRT E +PS V DG+LD F++A + +K Sbjct: 310 KTDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGELDSFIEAGIRWRK 364 >gi|320528516|ref|ZP_08029673.1| peptide chain release factor 2 [Solobacterium moorei F0204] gi|320131102|gb|EFW23675.1| peptide chain release factor 2 [Solobacterium moorei F0204] Length = 350 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 152/343 (44%), Positives = 215/343 (62%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + LFD + +RL+ N + W + +A+ ++RE L I + D + Sbjct: 1 MATLFDLEGKEKRLAENNALMAEADFWNDQKKAQKIIRESNQLKVLIETHHSLTDSFAEL 60 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + D + + S+ + E + + LLSG D++++ LE+H GAGGTE Sbjct: 61 SEGIGELSSSFDEDMNELISEEYTETMKKFEEFEIQVLLSGPYDNHNSILEIHPGAGGTE 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA ML RMY RWAE++ FK E ++ +GEEAG+KS ++LI+GP AYG+LK E GVHR Sbjct: 121 AMDWAAMLYRMYMRWAERKGFKIELMDYQEGEEAGMKSCSVLIQGPMAYGYLKAENGVHR 180 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DSN+RRHTSF+S+ + P +D +EIEI + D I T RASGAGGQH+N TDSA Sbjct: 181 LVRISPFDSNARRHTSFASVEIMPEFEDDLEIEIDDKDLDIITMRASGAGGQHINKTDSA 240 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+THIP+G+ V CQ +RSQ +N+ NML++KL +L++++ EE A WG Sbjct: 241 VRMTHIPSGITVFCQSQRSQIQNREACLNMLKSKLLQLKIRENEERAAAVRGEVKANEWG 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV PY MVKDLRT E + V+DG++D F+ + L Sbjct: 301 SQIRSYVFAPYTMVKDLRTGHEAGNVQAVMDGEIDGFIDSYLR 343 >gi|260438124|ref|ZP_05791940.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876] gi|292809448|gb|EFF68653.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876] Length = 372 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 167/350 (47%), Positives = 230/350 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L L D DN +++ L ED W + ++ ++E + L +A + E++ Sbjct: 15 DEPLKELRSALDLDNKAKKIEELEMHMEDQGFWNDPETSQKKLKELKALKDAFTNYNELE 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +E+A EE+D SI+ + + + K E + +LLS E D+ +A L+++A Sbjct: 75 KLRDDARTFMEIADEENDTSIIPDIEELVNEFKNLFEKVRISTLLSEEYDNCNAILKLNA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA+MLLRMYTRWAE + + E L+ DG+EAG+KS T+ I G NAYG+LK Sbjct: 135 GAGGTESCDWASMLLRMYTRWAESKGYTVETLDYLDGDEAGVKSVTIQINGENAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++N +R TSF S V P +++ ++++I+E D RIDTYR+SGAGGQH+ Sbjct: 195 ERGVHRLVRISPFNANGKRQTSFVSCDVMPDIEEDLDVDINEDDLRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITHIPTG+VVQCQ ERSQH+NK +A ML+AKLY L+ Q+ E Sbjct: 255 NKTSSAIRITHIPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKQQENAEKEAGIRGEV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EIGWG QIRSY+LQPY +VKD RTN E + VLDG++D F+ L Sbjct: 315 KEIGWGNQIRSYILQPYTLVKDHRTNAESGNAQAVLDGNIDLFLGEYLKW 364 >gi|257785087|ref|YP_003180304.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469] gi|257473594|gb|ACV51713.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469] Length = 369 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 149/352 (42%), Positives = 206/352 (58%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L + G Q++S L ++ P+ W + A+ +M + L + ++ I Sbjct: 12 LAERLFEIEGYLHLAEKRQQISELEAESARPNFWDDAEAAQKIMTQLASLRDDVAGIDRA 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +++L D EL E D + E+ ++ ++ + S + E D DA + + Sbjct: 72 KEKLGDAEAAFELGTELGDQASFDESRALAVSLEKDLSELELSSWFTDELDHGDAIVTIK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG ESQDW ML MY ++ ++R +K + + E G+ AT + G NAYG L+ Sbjct: 132 PGQGGLESQDWCEMLFHMYLKYCDRRGWKVDINDAPAAEVIGLDRATFTVSGKNAYGMLR 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRLVRISP D RR TSF+ + V PV+ + IE++I +D RID Y ASG GGQ Sbjct: 192 AEQGVHRLVRISPTDDKKRRQTSFAGVEVLPVLPEDIEVDIDPNDLRIDVYHASGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG VV CQ ERSQ +NKA A N+LR++LYE+E +KRE + Sbjct: 252 VNTTDSAVRITHIPTGTVVTCQNERSQLQNKAAAMNILRSRLYEIEKEKREAELDELRGP 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353 K EI +G QIRSYVL PYQ++KDLRT E + V DGDLD F+ A Sbjct: 312 KREISFGNQIRSYVLYPYQLIKDLRTGAETGNVESVFSDGDLDQFIIAYHRW 363 >gi|104773716|ref|YP_618696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513713|ref|YP_812619.1| protein chain release factor B [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422797|emb|CAI97438.1| Peptide chain release factor 2 (RF-2) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093028|gb|ABJ58181.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125366|gb|ADY84696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 332 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 157/325 (48%), Positives = 202/325 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ E L ++ L D LEL E D + ++T Sbjct: 1 MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDLTDEETALELLRLEADADLQKDTE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 D L +++ E + LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R Sbjct: 61 DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VDDSIEI+I D RID YR+SGAGGQH+N T SAVRITHIPTG+V Q +RSQ Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N +RAKL+ LE +K+ + + + +I WG QIRSYV PY MVKD RT Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG LD F+ A L + Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325 >gi|284029674|ref|YP_003379605.1| peptide chain release factor 2 [Kribbella flavida DSM 17836] gi|283808967|gb|ADB30806.1| peptide chain release factor 2 [Kribbella flavida DSM 17836] Length = 373 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 142/354 (40%), Positives = 209/354 (59%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D + ++ L + P LW + A+ + L + + Sbjct: 12 QLDATLTSIEKVLDLDALRREIADLGEQVAAPDLWDDQANAQKVTSRLSSLQADVERVTN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D +++EL+ EE+D L E+ + + ++ + +LLSGE D +A + + Sbjct: 72 LRSRIDDLGVMIELSREENDADSLAESEKEIAALAKSIQSLEVRTLLSGEYDEREALVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A ML RMY RWAE+ + TE + EEAG+KS T +K P AYG L Sbjct: 132 RSGAGGVDAADFAEMLQRMYLRWAERHGYPTEVYDTSYAEEAGLKSTTFGVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V PV++ + EI++ E + RID YR+SG GGQ Sbjct: 192 SVESGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIDVPEEELRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG VV CQ E+SQ +NKA A ++ + E Sbjct: 252 SVNTTDSAVRITHLPTGTVVSCQNEKSQLQNKASAM-VILKAKLLALKKAEERAQIDALR 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E + S V DG++DDF++A + ++ Sbjct: 311 GDVQGSWGDQMRSYVLHPYQMVKDLRTQYESGNTSGVFDGEIDDFVEAGIRWRR 364 >gi|332654908|ref|ZP_08420650.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16] gi|332516251|gb|EGJ45859.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16] Length = 373 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 158/353 (44%), Positives = 229/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L+ L LG D ++A + L L ++ W N+ +A+ + + + L + + Sbjct: 13 NLAPTLEKLGQALDLESAERELDMLQAESAADGFWNNLEKAQKVQQRIKTLQTKVDKHHK 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D + L E+ E +D S++ E + ++ E+E + ++LL+GE DS++ L + Sbjct: 73 RKQHWDDLMALCEMGNEFEDESLVPELEEGYAALEEEMEEARLQTLLTGEYDSSNVILTI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTE+QDWA ML RMYTRW E+ F + ++ DG+EAGIKSAT++I+G NAYG+L Sbjct: 133 HPGAGGTEAQDWAQMLYRMYTRWTERHGFTYQIMDYQDGDEAGIKSATIMIEGENAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GE GVHRLVR+SP+D+N+RR TSF+S+ V P + + +E+EI D + YRASGAGGQ Sbjct: 193 RGEHGVHRLVRVSPFDANARRQTSFASVEVMPDLPEDVEVEIRPEDIEMQVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVR+ H PTG+VV QQERSQ +NK MLRAKL EL++Q++ E + + Sbjct: 253 HVNKTSSAVRLIHKPTGIVVASQQERSQFQNKDNCMKMLRAKLVELQMQEKAEKISDLKG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV PYQ+VKD RT E ++ V+DG+LD F+ A L + Sbjct: 313 VQLKIEWGSQIRSYVFMPYQLVKDNRTAYETSNIGAVMDGELDGFINAYLTAE 365 >gi|171780065|ref|ZP_02920969.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281413|gb|EDT46848.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 336 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 152/336 (45%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + I A+ +E L E+Q+ + + LE+ Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D SI E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA+ML Sbjct: 59 DEDDSIQAELEETLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSFSS+ V P +DD++E+EI + D ++DT+R+ GAGGQ+VN + +R+THIPTG Sbjct: 179 AKRRHTSFSSVEVMPELDDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGIRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD+D F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334 >gi|118602328|ref|YP_903543.1| peptide chain release factor 2 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567267|gb|ABL02072.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 364 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 167/351 (47%), Positives = 231/351 (65%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L + RL + + E+P++W N +A++L +E+ L + K++ Sbjct: 13 LKQRTIVLLTHISLEKKQARLEEVLLEMENPNIWTNPDQAQVLGQEKSKLTSICQTFKQV 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL +A E+D + D+L I+ +E +FE + SG+ D N AYL++ Sbjct: 73 NSVLEDAQELLNMAQTENDEDTANDIIDDLDTIQSSIEKLEFERMFSGDLDVNSAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWA M+LRMY RW EK FK + +E GE GIKSAT+ G A+GWL+ Sbjct: 133 SGSGGTEAQDWAEMVLRMYLRWGEKHNFKVKLMETSAGEVTGIKSATIHFDGKYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+++N +RHTSF S++V P VD+ I+I+I+ D R+DTYRASGAGGQH Sbjct: 193 TEIGIHRLVRKSPFNANGKRHTSFCSVFVSPEVDNDIDIDINPLDLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT ++VQCQ RSQ NK QA L++KLYELE+QKR E Sbjct: 253 VNKTESAVRITHLPTNIIVQCQDGRSQRANKDQAMKQLKSKLYELEIQKRNAEKQSLEDK 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+ IGWG QIRSYVL +KDLRT +E T+ +DVLDG+LD F++A+L Sbjct: 313 KSNIGWGHQIRSYVL-DQSRIKDLRTGVESTNTNDVLDGNLDQFIEASLKA 362 >gi|126697716|ref|YP_001086613.1| peptide chain release factor 2 [Clostridium difficile 630] gi|115249153|emb|CAJ66964.1| Peptide chain release factor 2 (RF-2) [Clostridium difficile] Length = 328 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 160/326 (49%), Positives = 231/326 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ +++E + L + + ++ L D +L+E+ LEEDD S+ ++ Sbjct: 1 MNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + Sbjct: 61 KSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K + L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI Sbjct: 121 YKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASI 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQ Sbjct: 181 DVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A +L AKL EL+ +++E + ++I WG QIRSYV QPY++VKD RTN Sbjct: 241 HLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E + V++G++D F+ L + K Sbjct: 301 AEFGNVDSVMNGNIDLFINEYLKMNK 326 >gi|37520802|ref|NP_924179.1| peptide chain release factor 2 [Gloeobacter violaceus PCC 7421] gi|35211797|dbj|BAC89174.1| peptide chain release factor [Gloeobacter violaceus PCC 7421] Length = 354 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 146/342 (42%), Positives = 218/342 (63%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R++ L + P W + A+ ++ +L + ++ L D Sbjct: 8 RTIFDVAQRQIRIAALEQQASAPDFWDDQAAAQKALQNLNNLKQPLEQFGRWRNLLSDAE 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++LEL E D S+L E N++ + E++ + E LLSG D A L ++AGAGGT++ Sbjct: 68 VVLELVQETGDESLLPEAEGNIEALVGELDRWELEQLLSGPYDERGAILSINAGAGGTDA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE++ ++ LE+ +GEEAG+KSATL I G AYG+L E+G HRL Sbjct: 128 QDWAEMLLRMYTRWAERQGYQAHLLELSEGEEAGVKSATLEIDGRYAYGYLSAEKGTHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V PV+DDS++++I D IDT+R+ G GGQ+VN ++ V Sbjct: 188 VRISPFNANDKRQTSFAGVEVMPVLDDSVQVDIRPDDIEIDTFRSGGKGGQNVNKVETGV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+ V+C QER+Q +N+ +A ML+A+L LE +KR++ + + WG Sbjct: 248 RVTHKPTGISVRCTQERAQLQNRNKAMEMLKARLLVLEEEKRQQHLSDIRGEAVDAAWGN 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV PYQMVKDLRT E + + V++G ++ F++ L Sbjct: 308 QIRSYVFHPYQMVKDLRTEEETSDVTGVMNGKIEPFIERYLR 349 >gi|331695045|ref|YP_004331284.1| peptide chain release factor 2 [Pseudonocardia dioxanivorans CB1190] gi|326949734|gb|AEA23431.1| Peptide chain release factor 2 [Pseudonocardia dioxanivorans CB1190] Length = 369 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D ++ L + P LW + A+ + H + + ++++ Sbjct: 12 LAGTLENIEAVVDLPALRVEIADLEEQAGQPDLWNDTETAQKVTSRLAHANGELRRVEDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA +E D S + + + ++ E+E + +LLSGE D +A + + Sbjct: 72 RRRLDDLPVLYELAEDEGDESAIADADRDRVALRAEIESLEVRTLLSGEYDEREALVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A ML+RMY RWAE+ + + + EEAGIKSAT + P AYG L Sbjct: 132 SEAGGVDAADFAEMLMRMYLRWAERHGYGVDVYDTSYAEEAGIKSATFQVHAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESTDHIDIDEKDLRVDVYRSSGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A +L+AKL LE +++EE A + Sbjct: 252 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMVVLQAKL--LERKRQEERALMDSLK 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T WG Q+RSYVL PYQMVKDLRT+ E +P VLDGD+D F++A + ++ Sbjct: 310 DTGSSWGNQMRSYVLHPYQMVKDLRTDFEVGNPGAVLDGDIDGFIEAGIRWRR 362 >gi|300783176|ref|YP_003763467.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32] gi|299792690|gb|ADJ43065.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32] Length = 357 Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats. Identities = 151/352 (42%), Positives = 217/352 (61%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L + + D D +++ L + P+LW + A+ + + H + + ++ Sbjct: 4 LTGKLTQIESVMDLDALRAQVADLEQQASSPNLWDDPEAAQKVTSQLSHRQGELRRVSDL 63 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA E D + E L + ++ + +LLSGE D +A + + Sbjct: 64 RQRLDDLGVLYELAEAEGDSGSMAEAEAELTDLGKAIDGLEVRTLLSGEYDDRNAVVTIR 123 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ + T+ +I EEAGIKSAT + P YG L Sbjct: 124 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVYDISYAEEAGIKSATFKVSAPYVYGTLS 183 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V P V++ ++++E D R+D YR+SG GGQ Sbjct: 184 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDVAEKDIRVDVYRSSGPGGQS 243 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A +L+A+L + K EE A + Sbjct: 244 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAAAMKVLQARLMLRK--KEEERAEMDALR 301 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT+ E +P+ VLDGD+D F+ A + + Sbjct: 302 DGGSSWGNQMRSYVLHPYQMVKDLRTDYEVGNPTAVLDGDIDGFLDAGIRWR 353 >gi|258405989|ref|YP_003198731.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692] gi|257798216|gb|ACV69153.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692] Length = 371 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 161/351 (45%), Positives = 223/351 (63%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L + L D RL + + P WQN E ++RE+ L I + Sbjct: 12 LELQEKFESLWRRLDLQGHHDRLKTIEEELAKPEAWQNPEELTPILREKSRLTEEIESWE 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++D D LE+A E+ +LQ S+ + ++ + E LLS D +A LE Sbjct: 72 ALRDLHEDLQEWLEMADEDQGQEVLQALSETNANLAAQLNKVEMELLLSKPEDKGNAILE 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTE+QDWA MLLRMY RW E+R FK + L+ GEEAGIKS TL I+G AYG Sbjct: 132 IHPGAGGTEAQDWAEMLLRMYLRWCERRGFKVQELDSLPGEEAGIKSVTLQIQGTFAYGL 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E+G+HRL+RISP+D++ RRHTSF+S+ VYP D IEI++++ D R+D +R+SG GG Sbjct: 192 LQAEKGIHRLIRISPFDTSGRRHTSFASVDVYPEAADDIEIDVNDEDIRVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN T SA+RITH P+G+VVQCQ E+SQ +NK A +L+++LY+ E +KRE Sbjct: 252 QNVNKTSSAIRITHFPSGIVVQCQNEKSQRRNKETAMKILKSRLYDQERKKREADKQAEY 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +SK I WG QIR+Y LQPY++VKD RTN E VLDGD+D F+++ L Sbjct: 312 ASKEAIAWGSQIRTYTLQPYRLVKDHRTNTEAGDVDKVLDGDIDVFLRSYL 362 >gi|228474266|ref|ZP_04059001.1| peptide chain release factor 2 [Staphylococcus hominis SK119] gi|314936947|ref|ZP_07844294.1| peptide chain release factor 2 [Staphylococcus hominis subsp. hominis C80] gi|228271625|gb|EEK12972.1| peptide chain release factor 2 [Staphylococcus hominis SK119] gi|313655566|gb|EFS19311.1| peptide chain release factor 2 [Staphylococcus hominis subsp. hominis C80] Length = 332 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 218/325 (67%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P W N +A+ ++ + L + ++ E+ +L D EL EE D I ++ Sbjct: 1 MMTEPDFWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQEEYDDEIKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ + +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++ Sbjct: 61 EQDIVSFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQ 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKIETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++E + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 TN E V+DGD+ F++A L Sbjct: 301 TNEETAKVDAVMDGDIAPFIEAYLR 325 >gi|296452520|ref|ZP_06894217.1| peptide chain release factor RF2 [Clostridium difficile NAP08] gi|296881068|ref|ZP_06905011.1| peptide chain release factor RF2 [Clostridium difficile NAP07] gi|296258625|gb|EFH05523.1| peptide chain release factor RF2 [Clostridium difficile NAP08] gi|296427934|gb|EFH13838.1| peptide chain release factor RF2 [Clostridium difficile NAP07] Length = 338 Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats. Identities = 160/329 (48%), Positives = 232/329 (70%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K W + A+ +++E + L + + ++ L D +L+E+ LEE+D S+ + Sbjct: 8 EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVER 67 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + +++ ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E Sbjct: 68 DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 127 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K + L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF Sbjct: 128 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 187 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E Sbjct: 188 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 247 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH NK +A +L AKL EL+ +++E + ++I WG QIRSYV QPY++VKD Sbjct: 248 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 307 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V++G++D F+ L + K Sbjct: 308 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 336 >gi|152967725|ref|YP_001363509.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216] gi|226726318|sp|A6WEK6|RF2_KINRD RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151362242|gb|ABS05245.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216] Length = 367 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 150/353 (42%), Positives = 219/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + D D + L+ LN + P LW + A+ + + + I+++ Sbjct: 12 LRTTYASIREVSDLDALRKELADLNDEAAAPSLWDDPEHAQTVTSRLSAVQAELDRIEKM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+EL+ +E D L E L +K ++ + +LLSGE DS +A + + Sbjct: 72 GGRIDDLEVLVELSEDEHDADSLAEAETELNEVKEQLAQLEVRTLLSGEYDSREAIVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A ML+RMY RWAE+R +K+E + EEAGIKSAT + P AYG L Sbjct: 132 SEAGGVDAADFAEMLMRMYLRWAERRGYKSEVYDTSYAEEAGIKSATFKVAAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV ++ +++ E++ R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVAETDHVDVPENEVRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A +L+AKL E + R+ + + Sbjct: 252 VNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKAAAMRVLQAKLLEKARKDRQAELDALKGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + S + DG++D F++A + +K Sbjct: 312 D-SGSWGNQMRSYVLHPYQMVKDLRTNYEVGNTSSIFDGEIDSFLEAGIRWRK 363 >gi|255654235|ref|ZP_05399644.1| peptide chain release factor 2 [Clostridium difficile QCD-23m63] Length = 339 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 160/329 (48%), Positives = 232/329 (70%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K W + A+ +++E + L + + ++ L D +L+E+ LEE+D S+ + Sbjct: 9 EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVER 68 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + +++ ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E Sbjct: 69 DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 128 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K + L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF Sbjct: 129 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 188 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E Sbjct: 189 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 248 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH NK +A +L AKL EL+ +++E + ++I WG QIRSYV QPY++VKD Sbjct: 249 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 308 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V++G++D F+ L + K Sbjct: 309 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 337 >gi|149924687|ref|ZP_01913037.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1] gi|149814444|gb|EDM74035.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1] Length = 354 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 168/346 (48%), Positives = 227/346 (65%), Gaps = 2/346 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ +RL T DP W++ A+ ++RE+ L + I ++Q + D Sbjct: 4 GGIFDYAGKRERLEEYEIATGDPSFWEDNERAQKILREQSTLKKLVEQIDDVQQTIDDGR 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L EL EE D + E +NL + + +F +LSG D + A L ++AGAGG +S Sbjct: 64 ELYELGREESDTESIVEAWENLGQADALLGKLEFRRMLSGTHDEDSALLSINAGAGGVDS 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RW E++ F + L+I +G++AGI+ A L I+G AYGWL+ E GVHRL Sbjct: 124 QDWAEMLLRMYQRWGERQGFDVKVLDIQEGDQAGIRGADLAIEGDYAYGWLRSEIGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDD--SIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 VRISP+DS +RR TSF+SI V P + D EIE++ +D R+D YRASGAGGQHVN T+S Sbjct: 184 VRISPFDSQARRQTSFASIMVLPDLGDGKDFEIEVNPADLRVDKYRASGAGGQHVNKTES 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH PTG+VV CQ ERSQHKN A A ML+AKL++LE Q+R + + E K I W Sbjct: 244 AVRLTHEPTGIVVACQMERSQHKNMATAMRMLKAKLWDLEQQRRSDEISALEGDKKAIEW 303 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYV+ PYQ V D RT +++ + VLDGDL +M+A L ++ Sbjct: 304 GSQIRSYVIHPYQQVNDHRTELKQGNVDAVLDGDLGSYMEAFLLMQ 349 >gi|117928939|ref|YP_873490.1| peptide chain release factor 2 [Acidothermus cellulolyticus 11B] gi|166223620|sp|A0LVP4|RF2_ACIC1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|117649402|gb|ABK53504.1| bacterial peptide chain release factor 2 (bRF-2) [Acidothermus cellulolyticus 11B] Length = 369 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 151/350 (43%), Positives = 222/350 (63%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L + + D + + L + DP LW + A+ + L I ++ + Sbjct: 13 LDTRLAGIEQVLDLPAMRREAADLERQAADPGLWNDPENAQRVTSRLSFLQAEIRRVEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D ++L ELA E+D E + ++ ++ + +LLSGE D+ +A + ++ Sbjct: 73 RKRLDDVMVLFELAEAENDEPTRTEALAEMAALQKAIDDLEVRTLLSGEYDAREALVTIN 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ DWA MLLRMY RWAE+ + TE L+ EEAGIKSAT ++ P YG L Sbjct: 133 SQAGGVDAADWAQMLLRMYLRWAERHGYPTEILDTSYAEEAGIKSATFIVHAPFTYGLLA 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ +RR TSF+ + V PVV+ + I+I E + R+D +R+SG GGQ Sbjct: 193 AEHGTHRLVRISPFDNQARRQTSFAGVDVVPVVEKTDHIDIPEDEIRVDVFRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A +L+A+L LE +++EE A + Sbjct: 253 VNTTDSAVRITHLPTGIVVTCQNERSQLQNRATAMMVLQARL--LERRRQEEAAKLAALR 310 Query: 303 -KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +T WG QIR+YVL PYQ+VKDLRT +E ++ + VLDG++D+F+ A + Sbjct: 311 GETTTSWGTQIRNYVLHPYQLVKDLRTEVETSNTAGVLDGEIDEFIDAGV 360 >gi|258541170|ref|YP_003186603.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-01] gi|256632248|dbj|BAH98223.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-01] gi|256635305|dbj|BAI01274.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-03] gi|256638360|dbj|BAI04322.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-07] gi|256641414|dbj|BAI07369.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-22] gi|256644469|dbj|BAI10417.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-26] gi|256647524|dbj|BAI13465.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-32] gi|256650577|dbj|BAI16511.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653568|dbj|BAI19495.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-12] Length = 323 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 193/310 (62%), Positives = 242/310 (78%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +MRER L N I ++ ++ + D L+ELA E D ++ E L+ + E + ++ Sbjct: 1 MMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDLAEEAKRRET 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 ESLLSGEADSND YLEV+AGAGGTE+QDW MLLRMYTRWAE +K +E +GE+AG Sbjct: 61 ESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLMESSEGEQAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+L+ GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEIEI+ Sbjct: 121 LKSATILVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ++D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A A MLRA+L Sbjct: 181 DADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRATAMQMLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE ELQKRE A E++KT+IGWG QIRSYVL PYQMVKDLRT +E +P VLDGDLD Sbjct: 241 YEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNPDAVLDGDLD 300 Query: 345 DFMKATLAIK 354 FM A LA++ Sbjct: 301 AFMAAALAMR 310 >gi|242279065|ref|YP_002991194.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638] gi|242121959|gb|ACS79655.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638] Length = 372 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 225/343 (65%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + +N GG+FD + +RL + P W ++RE+ L+ ++ + Sbjct: 16 QNMNPSGGVFDHAQSKERLEEIEHDLSKPGAWDKPDALTPVLREKSMLEEKVTSYDNLTS 75 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 D L +A E+ D IL+ S+N++++ VE + +LLSG D + A LE+H G Sbjct: 76 SKDDVEEWLMMASEDQDQEILEALSENVEKLAKLVEQTELAALLSGPEDKSTAILEIHPG 135 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG ESQDWA MLLRMY RWA+KR +KT L+ +EAGIKS TL I+G AYG+LKGE Sbjct: 136 AGGIESQDWAEMLLRMYLRWADKRNWKTSYLDYQPDDEAGIKSVTLRIEGLYAYGFLKGE 195 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G+HRL+RISP+D++ RRHTSF+S+ VYP + IEIE+ + D R+D +RASG GGQHVN Sbjct: 196 AGIHRLIRISPFDASGRRHTSFASVDVYPEISQDIEIEVKDEDIRLDVFRASGPGGQHVN 255 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVRITH+PT +VVQCQ E+SQ KNK A +L+++LYE EL+++EE ++K Sbjct: 256 KTNSAVRITHLPTNIVVQCQNEKSQLKNKETAMKVLKSRLYEQELKRQEESKRADYATKD 315 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 IG+G QIR+Y LQPY++VKD R E + VLDG+LD + Sbjct: 316 SIGFGSQIRTYTLQPYRLVKDHRCGAEDGNVEAVLDGELDGLI 358 >gi|308071079|ref|YP_003872684.1| peptide chain release factor 2 [Paenibacillus polymyxa E681] gi|305860358|gb|ADM72146.1| Peptide chain release factor 2 (RF-2) [Paenibacillus polymyxa E681] Length = 331 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 225/325 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E + +++ ++++ D ++ ELA EE D ++ E Sbjct: 1 MAAPDFWDDNDKAQAVIAEMNAVKSSVDSYEQLRLEYEDAGMMAELADEEGDETLAGEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++++ + +++ + + LL+ D +A LE+H GAGGTESQDW MLLRMYTRWAEKR Sbjct: 61 NSIRSLLSKLQEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D +++EI D +IDTYRASGAGGQH+NTTDSAVRITH+P+G+VV CQ ERSQ Sbjct: 181 DVVPEIADDVDVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPSGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA MLR+KLYE +++++ + + +++I WG QIRSYV PY MVKD RT+ Sbjct: 241 IKNREQAMTMLRSKLYERKIEEQRQQLDEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DGDLD F+ L + Sbjct: 301 VETGNVGAVMDGDLDPFIDGYLRSQ 325 >gi|326692249|ref|ZP_08229254.1| peptide chain release factor 2 [Leuconostoc argentinum KCTC 3773] Length = 333 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 149/326 (45%), Positives = 211/326 (64%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE-DDCSILQET 88 + W + ++A+ ++ E L N + ++ + +L+E+ E+ +D E Sbjct: 1 MTESGFWDDNVKAQKVIEENNILKNRRDSFLNLTNQAEEIAVLIEMLSEDPEDEDTAAEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++++++ +VE E LL+ D+N+A LEVH G+GGTES DW L RMYTRWA++ Sbjct: 61 AASVEKVQKDVEAYNLEQLLTEPYDANNAILEVHPGSGGTESTDWGANLYRMYTRWAQQH 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F+ E L+ H G+EAGI SAT+ I G NAYG+L+ E+GVHR VRISP+DS RRHTSF S Sbjct: 121 GFQVEVLDYHAGDEAGIDSATIKISGHNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +DD+IE+E+ + D ++D +R+ GAGGQ+VN + VR+TH PTG+VV ER+ Sbjct: 181 VDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVSSTVERT 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q+ N+ A +L+ KLY+LEL+K+ K E GWG QIRSYVL PYQMVKD RT Sbjct: 241 QYGNRDYAMRLLKGKLYQLELEKQAAERAALTGEKMENGWGSQIRSYVLHPYQMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E P VLDGDLD F+ A L + Sbjct: 301 NYETNQPQQVLDGDLDPFINAYLQWQ 326 >gi|158321505|ref|YP_001514012.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs] gi|158141704|gb|ABW20016.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs] Length = 340 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 154/329 (46%), Positives = 218/329 (66%), Gaps = 1/329 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L K + W + A+ ++++ + + I ++ D +++ E+ D S Sbjct: 6 EELEYKMSEEDFWNDPENAQSVLKKAKGYRDTIEEYNQLHVDHEDLEMMISFI-EDGDES 64 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 ++ L+ ++ V + +LL GE D N+A + +HAG GG ++QDWA MLLRMYTR Sbjct: 65 FQKDLLKGLEALENRVREIKIATLLKGEYDKNNAIISIHAGTGGLDAQDWAKMLLRMYTR 124 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE + + + L+I EAGIKS TLLI+G NAYG+LK E+GVHRLVRISP+DS+ +RH Sbjct: 125 WAEDKGYGVKTLDILTDTEAGIKSVTLLIEGMNAYGYLKAEKGVHRLVRISPFDSSGKRH 184 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S+ V P +DDS++I+I+ +D RIDTYRASG+GGQHVN TDSAVRITHIPTG+VVQC Sbjct: 185 TSFASVDVMPEIDDSVDIQINPNDLRIDTYRASGSGGQHVNKTDSAVRITHIPTGIVVQC 244 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q ERSQH N+ A ML +KL E++ +++E + +I WG QIRSYV PY +V Sbjct: 245 QNERSQHSNRETAMKMLISKLIEVKETEQKEKIEDLQGEYNQIAWGSQIRSYVFNPYNLV 304 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KD RTN+E + V+DG++D+F+ L Sbjct: 305 KDHRTNVEMGNIQAVMDGEIDEFINGYLK 333 >gi|126729874|ref|ZP_01745687.1| peptide chain release factor 2 [Sagittula stellata E-37] gi|126709993|gb|EBA09046.1| peptide chain release factor 2 [Sagittula stellata E-37] Length = 374 Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats. Identities = 186/353 (52%), Positives = 239/353 (67%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ L W+ A RL N + EDP+LW N A+ LMR+RQ L +A+ Sbjct: 11 KIEKSLDLLKQRLGWETAQHRLEEFNARVEDPNLWDNPEAAQKLMRDRQSLVDALESYTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D + L+EL E+D ++ + L+ + K+ E+LL GE D NDA+LE+ Sbjct: 71 LKQELEDQVELIELGEMEEDAEVVADAEAALKALVETSAKKELEALLDGETDGNDAFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTE+ DWANML RMY RWAEKR F+ + E G EAGIKSAT IKG NAYGWL Sbjct: 131 KAGAGGTEACDWANMLARMYVRWAEKRGFEVDLQEEQAGAEAGIKSATYQIKGKNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G HRLVRISP+ R TSF+++ YPV+DD+IE+ ++ +D RIDT+R+SGAGGQ Sbjct: 191 KSESGTHRLVRISPFG-KGTRETSFAAVGAYPVIDDNIEVTVNPADIRIDTFRSSGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N Sbjct: 250 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHE 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRT E VLDGDLD FM+ATLA++ Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETADTQGVLDGDLDPFMEATLALQ 361 >gi|217077931|ref|YP_002335649.1| peptide chain release factor 2 [Thermosipho africanus TCF52B] gi|226739131|sp|B7IE81|RF2_THEAB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|217037786|gb|ACJ76308.1| peptide chain release factor 2 [Thermosipho africanus TCF52B] Length = 369 Score = 355 bits (910), Expect = 7e-96, Method: Composition-based stats. Identities = 167/350 (47%), Positives = 243/350 (69%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + ++ + +F +N + L L + D W + +A+ + ++ Q + I +K+ Sbjct: 12 EAKKKFEDIIKVFHPENKRKELEELEKQMGDSDFWSDQRKAREISQKAQRIRKIIDDMKD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + D +EL+ ++D S ++ + ++ I+ +V+ + E +L+G+ D+++AYL + Sbjct: 72 IEAKFEDLDAAIELS--DEDQSFVETIKEMVEEIEKKVKTFELELILNGKFDASNAYLTI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMY RWAE++ F + ++ GEEAGIKSA + IKG AYG+L Sbjct: 130 HPGAGGTESQDWASMLLRMYMRWAERKGFDVQIVDYQPGEEAGIKSAMIYIKGDYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+N RRHTSF+S+ V P +DD I+IEI+ D RIDTYRASGAGGQ Sbjct: 190 KYERGVHRLVRISPFDANKRRHTSFASVNVIPEIDDDIDIEINPEDLRIDTYRASGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITHIPTG+VV CQ ERSQ +NK A +L+A+LY+LEL+KR++ + Sbjct: 250 YVNKTESAVRITHIPTGIVVTCQTERSQLQNKETALKVLKARLYQLELEKRQKQLEEIQG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV QPY MVKD RTN+E + V+DG++D F+++ L Sbjct: 310 ELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGEIDIFIESEL 359 >gi|304407676|ref|ZP_07389327.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9] gi|304343159|gb|EFM09002.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9] Length = 329 Score = 355 bits (910), Expect = 7e-96, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E + + + +++ D +LE+ EE D S E + Sbjct: 1 MTAPDFWDDNDKAQAVISEMNAVKSTVEKYEKLAGDHDDLSTMLEMVEEEGDDSFESELT 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ + + + LL+ D +A LE+H GAGGTESQDW ML RMYTRWAEK Sbjct: 61 EGVESLVKRISDFELTLLLNQPYDKLNAILELHPGAGGTESQDWGQMLYRMYTRWAEKSG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS T+ IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVELLDYLPGDEAGIKSVTISIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++D IEIEI D ++DTYRASGAGGQHVN T+SA+RITHIP+G++V CQ +RSQ Sbjct: 181 DVMPEIEDDIEIEIRTEDLKVDTYRASGAGGQHVNKTESAIRITHIPSGIIVACQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA MLR+KLYE +++++++ +++I WG QIRSYV PY MVKD RT+ Sbjct: 241 IQNREQAMKMLRSKLYERKIEEQQKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DGDLD F+ L + Sbjct: 301 VETGNVGAVMDGDLDAFIDGYLRSQ 325 >gi|300813058|ref|ZP_07093436.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123317|ref|YP_004033576.1| bacterial peptide chain release factor 2 (brf-2) [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300495899|gb|EFK31043.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312279880|gb|ADQ60599.1| Bacterial peptide chain release factor 2 (BRF-2) [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 332 Score = 355 bits (910), Expect = 7e-96, Method: Composition-based stats. Identities = 157/325 (48%), Positives = 202/325 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ E L ++ L D LEL E D + ++T Sbjct: 1 MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 D L +++ E + LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R Sbjct: 61 DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VDDSIEI+I D RID YR+SGAGGQH+N T SAVRITHIPTG+V Q +RSQ Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N +RAKL+ LE +K+ + + + +I WG QIRSYV PY MVKD RT Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG LD F+ A L + Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325 >gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC 33331] Length = 368 Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRVDIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D L E L+ ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAEDEGDADALAEAESELESVRKALDEMEVRTLLSGEYDAREALVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAERHNYKTEVYETAYAEEAGIKSTTFAVEVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + +EI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364 >gi|227505562|ref|ZP_03935611.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940] gi|227197859|gb|EEI77907.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940] Length = 370 Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 216/353 (61%), Gaps = 4/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D +++ L + DP LW + A+ + I ++ Sbjct: 11 ELDSTLATIEKVMDPAALAEQVRELEAQAGDPSLWDDPAHAQQVTSALSAAQAKIRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ ELA EE D ++ D L+ + +E + ++LSGE D +A + + Sbjct: 71 LRSRVDDMPVMFELAEEEGDTAL---ADDELEDLGAAIEALEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I++ + D R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDGDVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAELDALG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGDLD F++A + + Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDLDGFLEAGIRWR 359 >gi|257867488|ref|ZP_05647141.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30] gi|257873817|ref|ZP_05653470.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10] gi|257801544|gb|EEV30474.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30] gi|257807981|gb|EEV36803.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10] Length = 329 Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 216/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ ++ + L + ++LE+ EE D + E Sbjct: 1 MAHPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ ++ + LL D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+ Sbjct: 61 ARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +I++EI+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L +K Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|13470493|ref|NP_102062.1| peptide chain release factor 2 [Mesorhizobium loti MAFF303099] gi|14021235|dbj|BAB47848.1| translation releasing factor RF-2 [Mesorhizobium loti MAFF303099] Length = 340 Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 224/326 (68%), Positives = 273/326 (83%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED LW +EA+ LMRERQ L+ I+ +K + L DN+ L+EL EE D ++ E Sbjct: 2 RAEDASLWNEPLEAQKLMRERQGLEEGIAAVKGLTQALEDNIGLIELGEEEGDEGVITEA 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ ++ E + +Q E+LLSGEAD+ND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+R Sbjct: 62 EAAIRSMQGEAKARQVETLLSGEADANDTYLEIHAGAGGTESQDWASMLLRMYTRWAERR 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +FK E LE+HDGEEAGIKSATL+IKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S Sbjct: 122 RFKVEVLEVHDGEEAGIKSATLMIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFAS 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +WVYPV+DD+IEI++SESD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERS Sbjct: 182 VWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+A+AW MLR++LYE EL+KRE IAN E+SK++IGWG QIRSYVLQPYQ+VKDLRT Sbjct: 242 QHKNRAKAWEMLRSRLYEEELKKREAIANATEASKSDIGWGHQIRSYVLQPYQLVKDLRT 301 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 +E TSPS VLDGDLDDFM+A+L+ + Sbjct: 302 GVESTSPSSVLDGDLDDFMEASLSQR 327 >gi|110634059|ref|YP_674267.1| peptide chain release factor 2 [Mesorhizobium sp. BNC1] gi|110285043|gb|ABG63102.1| bacterial peptide chain release factor 2 (bRF-2) [Chelativorans sp. BNC1] Length = 322 Score = 355 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 220/309 (71%), Positives = 260/309 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+ I+ I + L DN+ L++L EE D I++E ++ ++ E+ +Q E Sbjct: 1 MRERQSLEENINAINGLSRSLDDNVELIKLGEEEGDAGIVEEAESAIRSLRGEISARQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD+ND YLEVHAGAGGTESQDWA MLLRMYTRWAE+R K E LE+HDGEEAGI Sbjct: 61 TLLSGEADANDTYLEVHAGAGGTESQDWALMLLRMYTRWAERRGMKVETLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+ G NAYGWLK E GVHRLVRISP+DSN+RRHTSF+SIWVYPV+DDSIEIEI E Sbjct: 121 KSATILVHGHNAYGWLKTESGVHRLVRISPFDSNARRHTSFASIWVYPVIDDSIEIEIPE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 S+ RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQERSQHKN+A+AW MLRA+LY Sbjct: 181 SEVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWEMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KREE AN E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E SP DVLDGDLD+ Sbjct: 241 ELELKKREEAANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESPSPQDVLDGDLDE 300 Query: 346 FMKATLAIK 354 FMKA+L+ + Sbjct: 301 FMKASLSQR 309 >gi|77164311|ref|YP_342836.1| peptide chain release factor 2 [Nitrosococcus oceani ATCC 19707] gi|254433270|ref|ZP_05046778.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27] gi|76882625|gb|ABA57306.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosococcus oceani ATCC 19707] gi|207089603|gb|EDZ66874.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27] Length = 331 Score = 355 bits (910), Expect = 9e-96, Method: Composition-based stats. Identities = 173/328 (52%), Positives = 228/328 (69%), Gaps = 1/328 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 ++ + P +W A+ L +ER L + ++ + E+ + L ELA+EE D Sbjct: 2 EVDRELAVPSVWDEPERAQQLGQERAQLQSVVAPLAELGGEIIQVRELFELAMEEGDEDT 61 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 QE L ++ + +F+ + +GE D N+AYL++ AG+GGTE+QDWANMLLRMY RW Sbjct: 62 AQEIIAELDVVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRW 121 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 EK FKTE E+ +GE AGIKSA + +G A+GWL+ E GVHRLVR SP+DS +RRHT Sbjct: 122 GEKHSFKTELTEVSEGEVAGIKSAAIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHT 181 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S++VYP VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+P+ +VVQCQ Sbjct: 182 SFASVFVYPEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLPSSLVVQCQ 241 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQH+NKA A LRAKLYELE++ R+ E +K +IGWG QIR+YVL +K Sbjct: 242 SERSQHQNKAHAMAQLRAKLYELEMRNRQAEKQAAEEAKADIGWGSQIRNYVL-DQSRIK 300 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 DLRT IE + VLDGDLD F++A+L Sbjct: 301 DLRTGIEVGNTQGVLDGDLDSFIEASLK 328 >gi|257459323|ref|ZP_05624436.1| peptide chain release factor 2 [Campylobacter gracilis RM3268] gi|257443252|gb|EEV18382.1| peptide chain release factor 2 [Campylobacter gracilis RM3268] Length = 365 Score = 355 bits (910), Expect = 9e-96, Method: Composition-based stats. Identities = 159/349 (45%), Positives = 223/349 (63%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS ++ + G+ +N RL + D +LWQ++ +A + +E+ + N ++ Sbjct: 13 LSIKVENIAGVVKPENIKARLKEIEELENDQNLWQDIAKAGAIGKEKTKISNILNKFLNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + D L ELA E+D + ++ ++ + +LSGE D +A + +H Sbjct: 73 KNAVDDAKALYELANSENDEETINSLFAEADELEDKIINLEISMMLSGENDDKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + +++G NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKIEVLDFQEGEEAGLKDVSFIVRGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR+SP+DS RRHTSFSS+ V P ++D IEI I E D R+D +RASGAGGQH Sbjct: 193 AENGIHRLVRVSPFDSAGRRHTSFSSVMVSPELNDDIEINIEEKDIRVDVFRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T+SAVRITHIPTG+VV CQ +RSQHKNK A +L+++LYELEL K+ E S Sbjct: 253 INKTESAVRITHIPTGIVVNCQNDRSQHKNKETAMKVLKSRLYELELMKQREKDENAPKS 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L Sbjct: 313 --EIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKSIIEGVL 359 >gi|257438202|ref|ZP_05613957.1| peptide chain release factor 2 [Faecalibacterium prausnitzii A2-165] gi|257199279|gb|EEU97563.1| peptide chain release factor 2 [Faecalibacterium prausnitzii A2-165] Length = 373 Score = 355 bits (910), Expect = 9e-96, Method: Composition-based stats. Identities = 147/347 (42%), Positives = 214/347 (61%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L D + +R+ L P + + +K + E L ++ +++Q Sbjct: 18 VKDLEEALAIDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L + EE D ++ E + + + V+ Q ++L+GE D ++A L HAG G Sbjct: 78 DDAETMLVMLDEEYDPDMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML RMY +WA+ E L+ DG+EAG+KSA++++KG NAYG LK E G Sbjct: 138 GTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++I D + +R+SGAGGQH+N T Sbjct: 198 VHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVFRSSGAGGQHINKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+ H PTGVVV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + EI Sbjct: 258 SSAVRLIHKPTGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEI 317 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 318 AWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364 >gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL B-59395] gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL B-59395] Length = 370 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 156/355 (43%), Positives = 219/355 (61%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R+ L + DP LW + A+ + E H + + E+ Sbjct: 12 LDATLTTVEKVMDLEELRRRIDELEMQASDPDLWNDQDHAQKVTSELSHAQAELRRVTEL 71 Query: 63 QDRLCDNLILLELAL-EEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE D S ++ ++ ++E + +++L+GE D +A + Sbjct: 72 RSRLDDLPVLYELAEAEEGDAGVSATEDADTERADLRRDIEAMEVKTMLAGEYDPREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ E + EEAG+KSAT +K P YG Sbjct: 132 NIRSGAGGVDAADWAQMLMRMYIRWAEQHGHSVEVYDTSYAEEAGLKSATFAVKAPYMYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A +L+AKL E + + E Sbjct: 252 GQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLERKR-QEERAQMDA 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S T WG Q+RSYVL PYQMVKDLRTN+E +PS VLDG+LD F++A + + Sbjct: 311 LKSDTGASWGNQMRSYVLHPYQMVKDLRTNVESNNPSAVLDGELDQFIEAGIRWR 365 >gi|296118845|ref|ZP_06837421.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM 20306] gi|295968334|gb|EFG81583.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM 20306] Length = 367 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 157/352 (44%), Positives = 218/352 (61%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L + + D +R+ L + DP LW + A+ + E + + + Sbjct: 12 LSATLTTIEKVMDPRAMEERVRELEAQAGDPSLWDDPDHAQKVTSELSSTQAKLRKLSAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D ++ ELA EE D S+ D L ++ VE + ++LSG+ D +A + + Sbjct: 72 RGRLEDLPVMYELAEEEGDASL---ADDELDAVRDAVETLEVTTMLSGDYDQREAVINIR 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGTLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVR+SP+D+ +RR TSF+ + V PVV+ + IEI +S+ R+D YR+SG GGQ Sbjct: 189 VEQGAHRLVRLSPFDNQNRRQTSFAEVEVLPVVEQTDSIEIPDSEVRVDVYRSSGPGGQS 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG++V CQ E+SQ +NKA A +L+AKL E + + E + Sbjct: 249 VNTTDSAVRLTHVPTGIMVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAEMDALGA 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VL GD+DDF++A + + Sbjct: 308 GGNASWGNQMRSYVLHPYQMVKDLRTNHEVGDPSKVLGGDIDDFLEAGIRWR 359 >gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22] gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22] Length = 368 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 218/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAVPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELASVRKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE++ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL + Q+ + + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLDRRRQEEQARMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G+++ F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364 >gi|323697942|ref|ZP_08109854.1| peptide chain release factor 2 [Desulfovibrio sp. ND132] gi|323457874|gb|EGB13739.1| peptide chain release factor 2 [Desulfovibrio desulfuricans ND132] Length = 372 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 165/349 (47%), Positives = 220/349 (63%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L Q L G D+ RL + + P W N L++E+ L + + Sbjct: 14 LIDQYESLWGRLDYAETKTRLDAIEKEISKPGAWDNPEALTPLLKEKSQLSTKLEMYDGL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LELA E+ D L + + ++ + + ++ + E D DA LE+H Sbjct: 74 SEAKDDLDAWLELAQEDPDEESLSALNAQVALLRERLAGTELATMFAFEHDKGDAILEIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGG ESQDWA MLLRMY R+AE++ FK L+ GEEAG+KS TL I+G AYG LK Sbjct: 134 PGAGGVESQDWAEMLLRMYYRYAERKGFKVTQLDYQAGEEAGLKSVTLQIEGLFAYGLLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRL+RISP+DS+ RRHTSF+S+ VYP +D++IEIE+ + D RIDT+R+SG GGQ Sbjct: 194 GETGVHRLIRISPFDSSGRRHTSFASVDVYPDMDENIEIEVKDEDLRIDTFRSSGPGGQS 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVRITHIPTG+V QCQ E+SQH+NKA A +++A+LYE EL+K EE + Sbjct: 254 VNKTSSAVRITHIPTGIVAQCQNEKSQHRNKATALRLVKARLYERELKKIEESRRQDYQA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K I WG QIR+Y LQPY++VKD R+N E + LDGDLD+ ++ L Sbjct: 314 KDAIAWGSQIRTYTLQPYRLVKDHRSNCESGNVDAFLDGDLDEMIRNYL 362 >gi|239930935|ref|ZP_04687888.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] Length = 352 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 155/349 (44%), Positives = 214/349 (61%), Gaps = 1/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW N EA+ + HL + + ++ R+ Sbjct: 1 MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ S ++I ESD R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL E Q+ + + + Sbjct: 241 DSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQEEQAKMDALKGDGGN- 299 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 348 >gi|258651861|ref|YP_003201017.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233] gi|258555086|gb|ACV78028.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233] Length = 369 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 220/353 (62%), Gaps = 4/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D + + L+ P LW + A+ + H + IK++ Sbjct: 12 LDTTLTSIEKVMDVDRLARSIDELSEAASAPDLWNDQENAQKVTSRLSHAQAELKRIKDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L EL ++D E L ++ E++ ++ +LLSGE D +A + + Sbjct: 72 RQRLDDLEVLFELG--DEDPDTYLEAQQELLGLQKEIDAQEVRTLLSGEYDEREALVTIR 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A ML+RMY RW+E+ + TE + EEAGIKS T +K P AYG L Sbjct: 130 SEAGGVDAADFAEMLMRMYLRWSERHGYNTEVYDTSYAEEAGIKSTTFQVKAPYAYGTLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +++ E D R+D YR+SG GGQ Sbjct: 190 VEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVETSDHVDVDEKDLRVDVYRSSGPGGQG 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +L++KL LE +++EE A + Sbjct: 250 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMAVLQSKL--LERRRQEERAVMDALK 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T WG Q+RSYVL PYQMVKDLRTN E +PS V DG++DDF++A + ++ Sbjct: 308 DTGNSWGNQMRSYVLHPYQMVKDLRTNFEVGNPSAVFDGEIDDFIEAGIRWRR 360 >gi|88607366|ref|YP_505078.1| peptide chain release factor 2, programmed frameshift [Anaplasma phagocytophilum HZ] gi|88598429|gb|ABD43899.1| peptide chain release factor 2 [Anaplasma phagocytophilum HZ] Length = 376 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 168/352 (47%), Positives = 232/352 (65%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + D L L+ + P LW + +AK L+ ER + ++ + Sbjct: 13 EIGEDLASIARCLDIVGLESTLESLDLECSSPSLWDDAEKAKSLLSERSRVSAVLTSFRV 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D L E+ + DD L + LQ +KL + K+ E + S EAD+N +L + Sbjct: 73 LEKEHKDLAELAEMISDSDDRDFLATINAELQSLKLRISQKKTECMFSHEADANSCFLTI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +GAGGTES DW MLLRMYT+WAE +F E ++ DGEE G+K+ T+ I G AYGW Sbjct: 133 RSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETVDSVDGEETGLKAVTVKICGIGAYGW 192 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 + E G+HRLVRISP+D ++RHTSF+S+ V PVVD I+I+I E D RIDTYRASGAGG Sbjct: 193 ARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVVDHEIDIKILEKDLRIDTYRASGAGG 252 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVRITHIP+G+VVQCQ RSQH+N+A+A+++L+++LYE+ELQ++E+ Sbjct: 253 QHVNKTESAVRITHIPSGMVVQCQTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQDH 312 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K EIGWG QIRSYV+ PY+MVKDLRT E + V++GDLD F+ A L Sbjct: 313 QNKCEIGWGHQIRSYVMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALM 364 >gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC 49030] gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC 49030] Length = 376 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 146/352 (41%), Positives = 215/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + D + ++ L P LW + A+ + + H + +++ Sbjct: 12 LQQTFSSIREVSDVEQLKSEVAELTEAAAAPDLWDDPDVAQAITSKLSHKQGTLEKLQKF 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+ + +E D L E + ++++K E+ + +LLSGE D A + V Sbjct: 72 DQRIEDVELLVSMGEDEGDEDALNEAAAEVEKLKSELAALEISTLLSGEFDERSAVITVR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ DWA ML RMY RWAE R +K E L+ E AG+KSAT+ + P AYG L Sbjct: 132 AGAGGDDATDWAQMLTRMYIRWAENRGYKVEELDTSYAEGAGVKSATVQVNAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG GGQ Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHIDIDENDLRIDVFRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTGVVV Q E+SQ +N+A A +L+++L +L+ + EE + Sbjct: 252 VNTTDSAVRITHVPTGVVVSMQNEKSQIQNRAAAMRVLQSRLLQLKR-EEEEAQKKDLAG 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYV PYQMVKDLRT E +P V DGD+DDF++A + + Sbjct: 311 DIKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPQAVFDGDIDDFLEAGIRWR 362 >gi|299137096|ref|ZP_07030279.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8] gi|298601611|gb|EFI57766.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8] Length = 375 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 235/351 (66%), Gaps = 1/351 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 R+ G +FD + L+ + K DP +W + +++ LMRER+ L++ ++ E+ Sbjct: 12 RKYATCGSIFDSPRLKKELAVIEEKIADPAVWADAAKSQPLMRERKRLESQLADDAELAR 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 R D +L E + S+ + + + E + ++LS E D+ +A + VH G Sbjct: 72 RGEDIDAYFDLMRE-GEASVEPDLKREIDSLVAFSEALESRTMLSEENDTLNAIVTVHPG 130 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTESQDWA ML+RMY RWAE++ FKTE E+ DG+EAGIKSAT I G A+G + GE Sbjct: 131 AGGTESQDWAEMLMRMYLRWAERQGFKTEINELQDGDEAGIKSATFTITGDFAFGLIAGE 190 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVRISP+D RRHTSF+S++V P +DDSI I+I D RIDTYR+ G GGQHVN Sbjct: 191 TGVHRLVRISPFDQAKRRHTSFASVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHVN 250 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+V CQ ERSQHKNK +A MLR++LYE EL K++ ++ E SK Sbjct: 251 TTDSAVRITHLPTGIVAGCQNERSQHKNKEKAMKMLRSRLYEYELDKKKAVSRKLEDSKL 310 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 EI +G QIRSYVLQPY++ KDLRT +E VLDG+L+ F++ L +++ Sbjct: 311 EINFGSQIRSYVLQPYRIAKDLRTRVEVGDVDRVLDGELEPFIRGYLKMRR 361 >gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC 27064] gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC 27064] gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC 27064] Length = 368 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 158/353 (44%), Positives = 215/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + HL + + + Sbjct: 13 LSSTMGSIESVLDLDRMRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAELRKTEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA EDD L E L ++ ++ + +LLSGE D +A + + Sbjct: 73 RARIDDLGVLFELAEAEDDADTLAEAETELAAVRKALDEMEVRTLLSGEYDEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYMRWAERHGYATEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +EI E++ R+D YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVEIDETELRVDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQARMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + ++ Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAAIRWRR 364 >gi|300857995|ref|YP_003782978.1| peptide chain release factor RF-2 [Corynebacterium pseudotuberculosis FRC41] gi|300685449|gb|ADK28371.1| peptide chain release factor RF-2 [Corynebacterium pseudotuberculosis FRC41] gi|302205723|gb|ADL10065.1| Peptide chain release factor 2 (RF-2) [Corynebacterium pseudotuberculosis C231] gi|302330275|gb|ADL20469.1| Peptide chain release factor 2 (RF-2) [Corynebacterium pseudotuberculosis 1002] gi|308275958|gb|ADO25857.1| Peptide chain release factor 2 (RF-2) [Corynebacterium pseudotuberculosis I19] Length = 366 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 218/353 (61%), Gaps = 3/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW N A+ + E + + + Sbjct: 11 ELDATLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ ELA EE D + + + L + E+E + +++LSGE D+ +A + + Sbjct: 71 LRQRIDDMPVMYELAEEEGDDT--ELADEELAELTSEIESLEVKTMLSGEYDAREAVINI 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 129 RSGAGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ I V PVV+ + I+I +S+ R+D YR+SG GGQ Sbjct: 189 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E Sbjct: 249 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKR-QEERAELDALG 307 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E P VLDGDLD F++A + + Sbjct: 308 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGIRWR 360 >gi|154250427|ref|YP_001411252.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1] gi|154154363|gb|ABS61595.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1] Length = 364 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 166/350 (47%), Positives = 242/350 (69%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + +F ++ ++L L ++T P W + +A+ + RE Q + + +++ Sbjct: 7 ELKKKYDDIIEVFHPEDKKEKLKELESETLKPDFWNDQKKAQQINREIQRIRRIVEDMEK 66 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D + +ELA E+D S+ + + + ++ + +L+G+ D ++AYL + Sbjct: 67 IKVLFEDIEVGIELA--EEDPSMQEHLEQIVDEVGEKIREFELALILNGKFDGSNAYLSI 124 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMY RWAE++ F E ++ +GEEAGIKSATL IKG AYG+L Sbjct: 125 HPGAGGTESQDWASMLLRMYMRWAERKGFSVELVDYQEGEEAGIKSATLYIKGDFAYGYL 184 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+N RRHTSF+S+ V P ++D I+IEI D R+DTYRASGAGGQ Sbjct: 185 KYERGVHRLVRISPFDANKRRHTSFASVNVLPEIEDDIDIEIRPEDLRVDTYRASGAGGQ 244 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SA+RITH+PTG+VV CQ ERSQ +N+ A ML+A+LY+LEL+KR + + Sbjct: 245 YVNKTESAIRITHLPTGIVVTCQTERSQLQNRETAMKMLKARLYQLELEKRRKQIEQIQG 304 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV QPY MVKD RT++E + V+DG++D F++A L Sbjct: 305 ELRDISWGNQIRSYVFQPYTMVKDHRTDVETGNIEAVMDGEIDMFIEAEL 354 >gi|227486641|ref|ZP_03916957.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC 51172] gi|227235353|gb|EEI85368.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC 51172] Length = 329 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 167/326 (51%), Positives = 225/326 (69%), Gaps = 2/326 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL--EEDDCSILQETS 89 P+ W N +A+ +M + + +I+D + DN L++L +ED+ L+E Sbjct: 2 SPNFWDNSDKAQTVMADLSDKKEDLKAYTDIEDAIKDNKDLIDLVELSDEDESKTLEEVD 61 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 NL++IK + + ++ L+GE D N+AYL ++AGAGG E+ DWA+ML RMYTR+ EKR Sbjct: 62 SNLKQIKKSLASLKLKTQLNGEYDKNNAYLSINAGAGGLEATDWADMLFRMYTRYCEKRG 121 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++++ E GIKS TL +KGP AYG+LKGE+GVHRLVRISP+DS SRRHTSFSS+ Sbjct: 122 FKVEVKDLNNEEAGGIKSVTLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHTSFSSV 181 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V+P +D+ IEI SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV Q ERSQ Sbjct: 182 DVFPELDEDTSIEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAERSQ 241 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N+L +KL +++ ++++E + S ++I WG QIRSYV QPY MVKD RTN Sbjct: 242 MQNRETAMNLLISKLIQIKEEEKKEKIEDIQGSYSQIAWGSQIRSYVFQPYTMVKDHRTN 301 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E + V+DGD+ F+ A LA + Sbjct: 302 YEMGNVEAVMDGDIQGFIDAYLAQNQ 327 >gi|330465934|ref|YP_004403677.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032] gi|328808905|gb|AEB43077.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032] Length = 373 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 162/354 (45%), Positives = 221/354 (62%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D + L + P LW + A+ + + +++ I + + Sbjct: 13 LDATLRNIEAVLDLDRLRADKARLEQEASAPDLWDDQARAQQVTSQLSYVNGEIEKLGSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLELA E D +L E + + ++ + +LLSGE DS +A + + Sbjct: 73 RSRIDDANVLLELAEAEADSGVLSEVESEITGLAKAIQEMEVRTLLSGEYDSREALVAIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E++ RID YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDSIDIPENEMRIDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A +L+A+L LE +++EE A + Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKMAGLK 310 Query: 303 KTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G WG Q+RSYVL PYQMVKDLRT E +PS V DGDLD F++A + +K Sbjct: 311 TDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGDLDSFIEAGIRWRK 364 >gi|229817216|ref|ZP_04447498.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM 20098] gi|229785005|gb|EEP21119.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM 20098] Length = 373 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 141/351 (40%), Positives = 209/351 (59%), Gaps = 1/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + D D +++ L + +P LW + A+ + + + + Sbjct: 14 RAKYGSIAEALDMDRLKAQIAELEQQAAEPGLWDDPENAQKVTSRLSAAQSQLKRLNSAS 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 R+ D L+EL EE+D L E + +++I+ +++ + ++LL GE D A + + + Sbjct: 74 QRIDDVETLVELGQEEEDADTLAEAQEEVKKIQSDLDDMEIQTLLDGEYDERSAVVTIRS 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 134 GAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I +SD R+DTY +SG GGQ V Sbjct: 194 EGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDSDIRVDTYCSSGPGGQGV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 254 NTTYSAVRITHLPTGLVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELAGD 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGDLD F++A + + Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDLDGFIQAGIRWR 363 >gi|307702035|ref|ZP_07639043.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261] gi|307616680|gb|EFN95869.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261] Length = 329 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 155/329 (47%), Positives = 211/329 (64%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 EELVEQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RTN E V+DGDLD F+ A L + Sbjct: 299 HRTNFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|262037715|ref|ZP_06011157.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264] gi|261748187|gb|EEY35584.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264] Length = 348 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 167/349 (47%), Positives = 231/349 (66%), Gaps = 2/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD D+ ++ + KT +P W ++ ++E L I ++I Sbjct: 1 MRKSGGIFDLDSLNLKIERIEKKTAEPDFWN-RENSQETLKELNILKKLIEEYEKISGMN 59 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +++E E D S +E D + + E++ + + LL + DSN+A L ++AGAG Sbjct: 60 EDVSVMIEFI-EAGDDSFEKELDDKIDTVTEEIQNFKTKLLLDEKYDSNNAILTINAGAG 118 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DW ML RMY RW+ ++ FK E L+ GEEAGIKS TL IKG AYG+LKGE+G Sbjct: 119 GTEACDWTEMLYRMYDRWSNRKDFKVEVLDSLSGEEAGIKSITLNIKGSYAYGYLKGEKG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DSN +RHTSF+++ V P +DD +E+ I D ++DTYRASGAGGQHVNTT Sbjct: 179 VHRLVRISPFDSNGKRHTSFTAVNVVPEIDDDVEVNIRPEDLKVDTYRASGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPT VV CQ+ERSQ KNK A +L+++L+E+EL+KRE+ + ++++I Sbjct: 239 DSAVRITHIPTNTVVTCQKERSQLKNKETAMKILKSRLFEIELEKREKEMENIKGTESKI 298 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG QIRSYV QPY+MVKD RT E+ + V+DGD+D F+ L K Sbjct: 299 EWGSQIRSYVFQPYKMVKDHRTKAEEGNVDKVMDGDIDSFINEYLKFYK 347 >gi|134097701|ref|YP_001103362.1| putative peptide chain release factor 2 [Saccharopolyspora erythraea NRRL 2338] gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora erythraea NRRL 2338] gi|166225115|sp|A4F8R2|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora erythraea NRRL 2338] Length = 367 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 155/354 (43%), Positives = 224/354 (63%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS L + + D D +++ L + P LW +V A+ + + H + + IK+ Sbjct: 11 ELSTTLEGIESVMDLDALRAKIAELEEEAARPDLWDDVEHAQRVSSQLVHRQSELRKIKD 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D +L EL+ +E D S L E ++K ++E + +LLSG+ D +A + + Sbjct: 71 LRQRVEDLEVLYELSEDEGDDSGLAEADSERTKLKKDLEALEVRTLLSGDYDQREAVVTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 A AGG ++ D+A ML+RMY RWAE+ ++ E + EEAG+KSAT + P AYG L Sbjct: 131 RAEAGGVDAADFAEMLMRMYVRWAERHEYPVEVYDTSYAEEAGLKSATFRVNAPYAYGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ +EI E D R+D +R+SG GGQ Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVEIPEKDIRVDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A +L++KL L +K +E A + Sbjct: 251 SVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAALRVLQSKL--LAKKKEQERAELDAL 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +P VLDG +D F++A + ++ Sbjct: 309 KDSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPDAVLDGQIDGFLEAGIRWRR 362 >gi|306835540|ref|ZP_07468554.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC 49726] gi|304568597|gb|EFM44148.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC 49726] Length = 370 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 217/353 (61%), Gaps = 4/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 14 QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE S+ E +L ++ +E + ++LSGE D +A + + Sbjct: 74 LRGRLDDMPVMYELAEEEGTVSVADE---DLAELESAIESLEVTTMLSGEYDPREAVINI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWA K K + +I EEAGIKSAT ++ G YG L Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVR+SP+D+ RR TSF+ + V PVV+ + I++ +++ R+D YR+SG GGQ Sbjct: 191 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAELDALG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F++A + + Sbjct: 310 AGGNASWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGIRWR 362 >gi|157164977|ref|YP_001467027.1| peptide chain release factor 2 [Campylobacter concisus 13826] gi|166223623|sp|A7ZE19|RF2_CAMC1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|112800036|gb|EAT97380.1| peptide chain release factor 2 [Campylobacter concisus 13826] Length = 366 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 170/354 (48%), Positives = 231/354 (65%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL ++ +G + D+ RL + +DP WQ++ A L +E+ + N ++ + Sbjct: 12 KLQTKVENIGSIVKPDDIKARLKEIEAIEQDPDFWQDIARAGALNKEKTKISNMLAKFSD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L ELA E+D + ++ + + ++ + LLSGE D +A + + Sbjct: 72 ANQAVSDAKELFELANSENDEETINSLFEDAKNLDEKIVNLEISMLLSGEDDGKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + ++KG NAYG+ Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGENAYGYF 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P VDD IEIEI E D +IDTYRASGAGGQ Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEVDDDIEIEIEEKDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHIPTG+VVQCQ +RSQHKN+A A ML+++LYELEL K++E +N Sbjct: 252 HVNKTESAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASN--SV 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 310 EKSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKMIEGVLIAQK 363 >gi|260436566|ref|ZP_05790536.1| peptide chain release factor 2 [Synechococcus sp. WH 8109] gi|260414440|gb|EEX07736.1| peptide chain release factor 2 [Synechococcus sp. WH 8109] Length = 356 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 150/343 (43%), Positives = 206/343 (60%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD R L P W + A+ MR + +S + + + D Sbjct: 2 LRTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLAGWRGAVDDA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LEL + D +LQE + L +++ ++ + E LLSGE D A L ++AGAGGT+ Sbjct: 62 QATLELYELDPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HR Sbjct: 122 AQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANDKRQTSFAGVEVMPKIEEDVKLDIPEKDLEITTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 242 VRILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YV QPYQMVKDLRTN E V+DG LD F+ A L Sbjct: 302 NQIRNYVFQPYQMVKDLRTNEETNDVQAVMDGALDPFIDACLR 344 >gi|315445399|ref|YP_004078278.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. Spyr1] gi|315263702|gb|ADU00444.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. Spyr1] Length = 372 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 156/355 (43%), Positives = 216/355 (60%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + + H N + ++E+ Sbjct: 12 LDTTLTTVERVVDVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE+ E L +++ ++ + +LLSGE D +A + Sbjct: 72 RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E + + + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEMDAL 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 312 KGDGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 365 >gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 372 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 158/354 (44%), Positives = 223/354 (62%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D + +++ L ++ DP LW + A+ + R+ L++ ++ I I Sbjct: 13 LAATLASVSAVLDLEAMHTQIAELREQSADPELWADQDNAQKVTRQLSSLESMVNKINGI 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 RL D +L ELA EDD E L +++ E+ + +LL+G D +A + ++ Sbjct: 73 GQRLDDLGVLYELAEAEDDADTRVEADRELDQLRKEIGELEVRTLLNGPHDEREAIVTIN 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ DWA ML RMY RWAE+ + T+ E EEAGIKS + +K P AYG L+ Sbjct: 133 SQAGGVDAADWAQMLQRMYLRWAERHGYPTDVYETSYAEEAGIKSTSFAVKTPFAYGTLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE G HRLVRISP+D+ +RR TSF+ + V PVV+ S IEI + D R+D YR+SG GGQ Sbjct: 193 GEHGTHRLVRISPFDNQNRRQTSFAGVDVVPVVEQSDHIEIDDGDLRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +ML+AKL L ++ EE A + E Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQLQNKATAMSMLQAKL--LARKREEEQAALDEIR 310 Query: 303 KTEI-GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+R+YVL PYQ VKD+RT E + S VLDGD+D+F+ A + + Sbjct: 311 GDSVSSWGTQMRNYVLHPYQSVKDVRTGAETGNTSGVLDGDIDEFIDAEIRWMR 364 >gi|325571387|ref|ZP_08146887.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC 12755] gi|325155863|gb|EGC68059.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC 12755] Length = 329 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ ++ + L + ++LE+ EE D + E Sbjct: 1 MADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ ++ + LL D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+ Sbjct: 61 ARIGKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLL+KG NAYG+LK E+GVHR VRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRFVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +I++EI+ D +IDTYRASGAGGQH+N T+SAVRITHIP G VV Q +RSQ Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPKGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L +K Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|88658024|ref|YP_507510.1| peptide chain release factor 2, programmed frameshift [Ehrlichia chaffeensis str. Arkansas] gi|88599481|gb|ABD44950.1| peptide chain release factor 2, programmed frameshift [Ehrlichia chaffeensis str. Arkansas] Length = 366 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 172/355 (48%), Positives = 239/355 (67%), Gaps = 2/355 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L + L + G D DN L+ L+ + LW + A+ ++ ER + ++ Sbjct: 12 VSLGKALQLIRGHLDIDNLTSLLADLSLQCSSTSLWDDNSLAQRILCERARISKTLNSFT 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+++ LL + + D +L E L ++K +V+ K+ E L S EAD ND ++E Sbjct: 72 ELEEEYNYYTELLSVINNDTD-ELLNELEAGLAKLKEKVQKKEVECLFSNEADHNDCFIE 130 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGGTES DW++ML RMY RWAE FKTE + DGEE G+KSAT+ + G NAYG Sbjct: 131 IQSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYG 190 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 W K E G+HRLVRISP++SN++RHT+FSSI V PV+++ IEI + D RIDTYRASGAG Sbjct: 191 WAKTESGIHRLVRISPFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAG 250 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T+SAVRITHIP+G+VVQCQ RSQH+N A+A N+L+++LY+L+LQ++E+ Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEE 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + IGWG QIRSYV+ PYQMVKD+RT E + + VLDG+LD F+ + L K Sbjct: 311 HNKRCNIGWGNQIRSYVMHPYQMVKDIRTGHEVGNVNSVLDGNLDSFIISALTTK 365 >gi|296129092|ref|YP_003636342.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109] gi|296020907|gb|ADG74143.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109] Length = 371 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 148/354 (41%), Positives = 222/354 (62%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D +++ L+ + P+LW + A+ + + + + + Sbjct: 12 QLRTTLESIETVSDPTALRAKIAELSEQASVPNLWDDPEAAQKVTSALSSAQSELERVDK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D L+E+A EEDD L E L I+ ++ + +LL+GE D DA + + Sbjct: 72 LRGRIDDLETLVEMAAEEDDADTLAEAEAELVGIRKDLGELEIRTLLAGEYDVRDAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 132 RAGAGGVDAADFAEMLLRMYLRWAERHGYATSVLDTSYAEEAGLKSATFEVKAPYAFGHL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI ES+ ++D +R+SG GGQ Sbjct: 192 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSVEIPESEIKVDVFRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L Q+ E A + Sbjct: 252 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLL-LVRQEEERAAKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E +P+ V DGD+DDF++A + ++ Sbjct: 311 GDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPASVFDGDIDDFIEAGVRWRR 364 >gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071] gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071] Length = 373 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D + ++ L + P LW + A+ + + HL + + + Sbjct: 15 LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D +E L ++ ++ + +LLSGE DS +A + + Sbjct: 75 RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T + P AYG L Sbjct: 135 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ +E N + Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 315 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 366 >gi|260771153|ref|ZP_05880080.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972] gi|260613750|gb|EEX38942.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972] gi|315179241|gb|ADT86155.1| peptide chain release factor 2 [Vibrio furnissii NCTC 11218] Length = 320 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 169/317 (53%), Positives = 224/317 (70%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ + I ++ + D LLELA+E +D E L+ + Sbjct: 2 WNEPERAQALGKERSSLEAVVETIDQLDQGVDDVEGLLELAVEAEDQETFDEIGPELEEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++ +F + SG+ DS+D YL++ AG+GGTE+QDW +M+LRMY RWA+ + FKTE + Sbjct: 62 ESKLAKLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMMLRMYLRWADAKGFKTEVI 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S +VYP + Sbjct: 122 EVSEGDVAGLKSATVRIVGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Q Sbjct: 182 DDNIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLK 317 >gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78] gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG] gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF] gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78] Length = 371 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D + ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D +E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T + P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ +E N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|190891331|ref|YP_001977873.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT 652] gi|190696610|gb|ACE90695.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT 652] Length = 342 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 235/329 (71%), Positives = 281/329 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N K EDP+LW + EA+ LMRERQ LD+ I+ +++++ +L DN+ L+EL EE D ++ Sbjct: 1 MNNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVRQLEQQLKDNVELIELGEEEGDGGVV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 61 KEAEDALKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 121 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQ Sbjct: 181 FSSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQ 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW MLRA++YE EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 241 ERSQHKNRAKAWEMLRARMYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 300 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT + T+P DVLDGDL++FM+A LA + Sbjct: 301 LRTGVASTAPDDVLDGDLNEFMEAALAHR 329 >gi|306825598|ref|ZP_07458937.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431959|gb|EFM34936.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 329 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 154/329 (46%), Positives = 212/329 (64%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + +++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVEQLTELDKMMANYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLFFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E + V+DGDLD F+ A L + Sbjct: 299 HRTSFEVSQVDKVMDGDLDGFIDAYLKWR 327 >gi|157964348|ref|YP_001499172.1| peptide chain release factor 2 [Rickettsia massiliae MTU5] gi|157844124|gb|ABV84625.1| Peptide chain release factor RF-2 [Rickettsia massiliae MTU5] Length = 337 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 182/328 (55%), Positives = 238/328 (72%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T +P LW + A+ L+RE+ +L+ ++ +++ L D L L E+A E+D L Sbjct: 4 LEELTANPSLWNDQANAQKLLREKSNLEEKLNAFNKLKSNLKDALELEEMAEAENDLETL 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + +L+ + + + E L SGEAD N+ +LE++AGAGGTES DWA++++RMY R+A Sbjct: 64 SQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYLRFA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHRLVRISP+++ +R TS Sbjct: 124 ERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKRMTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPTG V QCQ Sbjct: 184 FASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQS 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRSYVLQPYQMVKD Sbjct: 244 DRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRSYVLQPYQMVKD 303 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353 LRT+ E + VLDGDL++F+ A LA+ Sbjct: 304 LRTDYETSDTKGVLDGDLEEFVSANLAM 331 >gi|218282777|ref|ZP_03488959.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989] gi|218216361|gb|EEC89899.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989] Length = 346 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 151/343 (44%), Positives = 221/343 (64%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD + +++ + +T +P WQ+ +A+ ++R + L + + +E+ +L Sbjct: 2 SHFDLSSKNKQIEDYDKQTLEPDFWQDQKKAQQVIRAKNALKDIVDRYEELDLQLNSLND 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + E D ++ + + + E + + LLS E D N+A LE+H GAGGTES Sbjct: 62 TADELKSEFDEELMMIAEEEYMDMDKKFENFEIQVLLSHEYDQNNAILEIHPGAGGTESC 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMYTR+AEK FK L+ G+EAGIKS T L++G AYG+LK E+GVHRLV Sbjct: 122 DWASMLYRMYTRYAEKHGFKVTVLDYLPGDEAGIKSVTFLVEGDKAYGYLKSEKGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DS +RRHTSF+S+ V P +D IEI+I D ++T RASGAGGQH+N TDSAVR Sbjct: 182 RISPFDSGARRHTSFASLDVMPQFNDEIEIDIKPEDLIVETKRASGAGGQHINKTDSAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + H PTG+V CQ RSQH+N+ + +L+++LY+LE++++E+ + ++ WG Q Sbjct: 242 MVHKPTGIVATCQNGRSQHENREECLRVLKSRLYQLEIEEQEKKIAQIKGVQSANEWGSQ 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IRSYV+ PY +VKD+RT E + VLDGDLD+F+ A L + Sbjct: 302 IRSYVMHPYSLVKDVRTGYETSQVQSVLDGDLDEFIFAYLKSQ 344 >gi|169335448|ref|ZP_02862641.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM 17244] gi|169258186|gb|EDS72152.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM 17244] Length = 364 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 166/351 (47%), Positives = 232/351 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++L+ + G + + L T D W +A +++E + L + I+ + Sbjct: 14 IDKELSDIAGSINIKSLKDELVKKETLMNDESFWNENDKANKILKEVKSLKSQINSYSSL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D +L+E+ E+ + + L ++ E++ ++LLSGE DSN+A L +H Sbjct: 74 EYKKDDISVLVEMLQEDFSQNEADSAMEELLELEKELKVFTIDTLLSGEYDSNNAILSIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA MLLRM+ R+AEKRKFK + LE G+ AGIKS TLLI G NAYG+LK Sbjct: 134 PGAGGTESQDWAEMLLRMFIRFAEKRKFKIKILEQLPGDIAGIKSVTLLISGDNAYGYLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE+GVHRLVRISP+DSNSRRHTSF+S+ V P + + I +EI+ SD +IDTYRA GAGGQH Sbjct: 194 GEKGVHRLVRISPFDSNSRRHTSFASVDVEPEIKEDINLEINPSDLKIDTYRAGGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH+PT +VV CQ ERSQ +NK A +L+ KLY++ +++ +E + + Sbjct: 254 VNKTDSAVRITHLPTKIVVSCQNERSQFQNKETAMKILKGKLYKILMEEHKEKIDEIKGD 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +I WG QIRSYV PY MVKD RT E ++ V+DGD++ F+ A L + Sbjct: 314 YGQIAWGNQIRSYVFHPYSMVKDHRTKTETSNVQSVMDGDINIFIDAFLKM 364 >gi|38233352|ref|NP_939119.1| peptide chain release factor 2 [Corynebacterium diphtheriae NCTC 13129] gi|76363349|sp|Q6NIM2|RF2_CORDI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|38199612|emb|CAE49268.1| peptide chain release factor 2 [Corynebacterium diphtheriae] Length = 369 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 216/353 (61%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + ++ R+ L + DP LW + A+ + E + + + Sbjct: 11 QLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKLKKLST 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ ELA EE L + L + +VE + +++LSGE DS +A + + Sbjct: 71 LRQRIDDLPVMYELADEEG-EDALALADEELAELTADVEALEVKTMLSGEYDSREAVINI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ I V PVV+ + I+I +S+ R+D YR+SG GGQ Sbjct: 190 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAELDALG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D ++A + + Sbjct: 309 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLLEAGIRWR 361 >gi|291445100|ref|ZP_06584490.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 15998] gi|291348047|gb|EFE74951.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 15998] Length = 368 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 215/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E D E L+ +K ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364 >gi|116074014|ref|ZP_01471276.1| peptide chain release factor 2 [Synechococcus sp. RS9916] gi|116069319|gb|EAU75071.1| peptide chain release factor 2 [Synechococcus sp. RS9916] Length = 356 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 145/341 (42%), Positives = 204/341 (59%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + + + + + D Sbjct: 3 RTVFDVPALKARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLEQLNQWKRAVDDAD 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +EL E D +L E L +++ E++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATVELYALEPDDDMLGEAQTGLTQLRTELDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML+RMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEDVQLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRT E V+DGDLD F+++ L Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETNDVQGVMDGDLDPFIQSLL 343 >gi|183603302|ref|ZP_02711260.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC1087-00] gi|183603790|ref|ZP_02721350.2| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016] gi|194397508|ref|YP_002037401.1| peptide chain release factor 2 [Streptococcus pneumoniae G54] gi|225856431|ref|YP_002737942.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031] gi|225858565|ref|YP_002740075.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585] gi|225860729|ref|YP_002742238.1| peptide chain release factor 2 [Streptococcus pneumoniae Taiwan19F-14] gi|298229611|ref|ZP_06963292.1| peptide chain release factor 2 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255815|ref|ZP_06979401.1| peptide chain release factor 2 [Streptococcus pneumoniae str. Canada MDR_19A] gi|307067358|ref|YP_003876324.1| protein chain release factor B [Streptococcus pneumoniae AP200] gi|183570249|gb|EDT90777.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC1087-00] gi|183578420|gb|EDT98948.1| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016] gi|194357175|gb|ACF55623.1| peptide chain release factor 2 [Streptococcus pneumoniae G54] gi|225721230|gb|ACO17084.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585] gi|225726237|gb|ACO22089.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031] gi|225727373|gb|ACO23224.1| peptide chain release factor 2 [Streptococcus pneumoniae Taiwan19F-14] gi|306408895|gb|ADM84322.1| Protein chain release factor B [Streptococcus pneumoniae AP200] Length = 329 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 154/329 (46%), Positives = 209/329 (63%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|160944128|ref|ZP_02091358.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii M21/2] gi|158444804|gb|EDP21808.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii M21/2] gi|295105045|emb|CBL02589.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium prausnitzii SL3/3] Length = 373 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 147/350 (42%), Positives = 218/350 (62%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ + L + + +R+ L P + + +K + E L ++ +++Q Sbjct: 15 AKAVKDLEEALAIEASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQ 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +LE+ EE D +++ E + + + VE Q ++L+GE D ++A L HA Sbjct: 75 GLYDDAETMLEMLDEEYDPAMIPEAEEAVNTVGKAVEELQLMTMLNGEYDHSNAILTFHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GGTE+QDWA ML RMY +WA+ E L+ DG+EAG+KSA++++KG NAYG LK Sbjct: 135 GTGGTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGLKSASMMVKGANAYGLLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+D+N+RR TSF+S+ V P +D++I++ I D + YR+SGAGGQH+ Sbjct: 195 ENGVHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVNIRPEDIEMQVYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+ H PTG+VV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + Sbjct: 255 NKTSSAVRLIHKPTGIVVNCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EI WG QIRSYV PY MVKD RTN E + V+DGD+D+F+ A L Sbjct: 315 NEIAWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDIDEFIFAYLKA 364 >gi|110834510|ref|YP_693369.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2] gi|110647621|emb|CAL17097.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2] Length = 356 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 172/350 (49%), Positives = 229/350 (65%), Gaps = 8/350 (2%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ +RL+ + + E P +W + A+ L +ER L+ + I + L D Sbjct: 6 GGIFDYVQKSERLTEVERELESPDVWNDPPYAQALGKERSQLEGVVKTIDDASQGLEDTS 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL+L +EE D L E +L+ ++ V +F + SG+ D AYL++ +G+GGTE+ Sbjct: 66 ALLDLVVEEGDEDTLSEVESDLRDLEKMVADLEFRRMFSGQMDPCSAYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA M+LRMY RW E FKTE +E G+ AGIKSAT+ +G AYGWL+ E GVHRL Sbjct: 126 QDWAEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATVRFEGDYAYGWLRTETGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS++V P VDD I+IEI + R+DTYRASGAGGQHVN TDSAV Sbjct: 186 VRKSPFDSGGRRHTSFSSVFVSPEVDDDIDIEIDLGNMRVDTYRASGAGGQHVNRTDSAV 245 Query: 251 RITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 R+T++ VV QCQ ERSQH+NK +A M++AK+YELE+Q+R E+SK Sbjct: 246 RLTYLFKDDGGTEHTVVTQCQSERSQHQNKDKAMKMMQAKVYELEMQRRNAEKQALENSK 305 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 306 ADIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGALDPFIEASLKA 354 >gi|291279507|ref|YP_003496342.1| peptide chain release factor RF-2 [Deferribacter desulfuricans SSM1] gi|290754209|dbj|BAI80586.1| peptide chain release factor RF-2 [Deferribacter desulfuricans SSM1] Length = 375 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 179/354 (50%), Positives = 247/354 (69%), Gaps = 3/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTK-TEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++ + + + D +++ ++ EDP W E+K L++E+ L +S + Sbjct: 14 EIDKSIESFKQVVKEDEINKKIEAIDKMSMEDPDFWNK-KESKQLLKEQASLKKFLSEWE 72 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+ D +L+EL E + ++ NL +K V + + +L+GE D N+A + Sbjct: 73 ELLTIREDIDVLIELFKE-GSEEVKEDIISNLNELKKRVSDFELKLILNGEHDINNAIVT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +HAGAGGTE+ DW +ML RMYTRW E++K+K E L++ G+EAGIKS T + G +YG+ Sbjct: 132 IHAGAGGTEACDWVSMLFRMYTRWVERKKYKYEILDMLPGDEAGIKSITFNVIGEYSYGY 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE GVHRLVRISP+DSN+RRHTSF+S++V P +DD I+IEI+ESD +I+T+RASGAGG Sbjct: 192 LKGESGVHRLVRISPFDSNNRRHTSFASVFVLPEIDDEIDIEINESDLKIETFRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITH+PTG+VV CQ ERSQHKNKA A +L+A+LYE E++KR + E Sbjct: 252 QHVNTTDSAVRITHLPTGIVVSCQNERSQHKNKAHAMKILKARLYEYEMEKRNKEKEKLE 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SSKTEIGWG QIRSYV+ PY+MVKDLRT E + V+DGD+DDF+K L ++ Sbjct: 312 SSKTEIGWGNQIRSYVMHPYKMVKDLRTRYETGNVDAVMDGDIDDFIKTYLLME 365 >gi|328543671|ref|YP_004303780.1| peptide chain release factor 2 [polymorphum gilvum SL003B-26A1] gi|326413415|gb|ADZ70478.1| Peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1] Length = 323 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 224/309 (72%), Positives = 257/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD I+ ++ ++ L DN+ L+EL E D S++ E + L+ +K EV Q Sbjct: 1 MRERQQLDEGITGVRRLESELSDNIELIELGDLEGDKSVVNEAEEALRGLKDEVLKLQMA 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLE++AGAGGTESQDWA+MLLRMY RWAEKR +K E LE+HDGEEAGI Sbjct: 61 SLLSGEADGNDTYLEINAGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSF+S WVYPVVDDSIEI+I+E Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSQARRHTSFASAWVYPVVDDSIEIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQ ERSQHKN+A AW ML+A++Y Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQSERSQHKNRATAWAMLKARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKREE A+ +SKT IGWG QIRSYVLQPYQMVKDLRT +E +SP DVL+GDLD Sbjct: 241 EAELQKREEAASAEAASKTSIGWGHQIRSYVLQPYQMVKDLRTGVESSSPDDVLNGDLDP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAQR 309 >gi|325684476|gb|EGD26640.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 332 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 201/325 (61%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ E L ++ L D LEL E D + ++T Sbjct: 1 MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 D L +++ E + LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R Sbjct: 61 DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E G+EAG+KS ++ I G N YG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNTYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VDDSIEI+I D RID YR+SGAGGQH+N T SAVRITHIPTG+V Q +RSQ Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N +RAKL+ LE +K+ + + + +I WG QIRSYV PY MVKD RT Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG LD F+ A L + Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325 >gi|87123562|ref|ZP_01079413.1| Peptide chain release factor 2 [Synechococcus sp. RS9917] gi|86169282|gb|EAQ70538.1| Peptide chain release factor 2 [Synechococcus sp. RS9917] Length = 356 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 148/342 (43%), Positives = 205/342 (59%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + +++ + + D Sbjct: 3 RTVFDVPALKARQQDLEQLASQPDFWDDQPNAQKQMRRLDEVKAQLQQLEQWRGAIDDAQ 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E + L ++ ++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYDLEPDDDMLSEAQEGLTTLRHALDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE K E+ +GEEAGIKSAT+ I G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDHGMKVSVDELSEGEEAGIKSATIEIDGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P ++D ++I+I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEDEVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YV PYQMVKDLRT E T V+DG LD F++A L Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETTDVQGVMDGHLDPFIQALLR 344 >gi|282882039|ref|ZP_06290680.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B] gi|300814941|ref|ZP_07095169.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281298069|gb|EFA90524.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B] gi|300510911|gb|EFK38183.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 370 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 176/347 (50%), Positives = 234/347 (67%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 L+ L D + ++ LN K + + W + +A+ +++E ++ EI D Sbjct: 17 SSLDELALSLDVNGLRDKIKELNKKQMEQNFWDDNEKAQKIIKELNSYQRKVNPYDEISD 76 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + D +L L EDD S E + I+ +V + E+LL+GE D NDA L +HAG Sbjct: 77 LIEDANDILLLMEMEDDYSSYDEFKKLILNIEKKVSEYKLETLLNGEFDENDAILSIHAG 136 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDWA+MLLRMY R+A + FK E L+I +EAGIKS TL I G +AYG+LKGE Sbjct: 137 AGGTEAQDWASMLLRMYVRYATNKGFKVETLDILKEDEAGIKSVTLKISGEHAYGFLKGE 196 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +GVHRLVRISP+D+N RRHTSFSS+ V+P +D I+IEI + D +IDTYR+SGAGGQHVN Sbjct: 197 KGVHRLVRISPFDANKRRHTSFSSVDVFPDIDGDIDIEIKDEDLKIDTYRSSGAGGQHVN 256 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITHIPTG+VVQCQ ERSQ +N+ +A L+AKL L ++R+E + + + + Sbjct: 257 TTDSAVRITHIPTGIVVQCQNERSQIQNRERAMQTLKAKLLALAEEERKEKIDDLQGNYS 316 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV QPY +VKD RTN E + V+DGDLD F+ A L Sbjct: 317 QIAWGSQIRSYVFQPYTLVKDHRTNCEVGDVNKVMDGDLDPFINAYL 363 >gi|254432093|ref|ZP_05045796.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001] gi|197626546|gb|EDY39105.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001] Length = 358 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 144/341 (42%), Positives = 206/341 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR+ + + ++ + + D Sbjct: 3 RTVFDVPALKARQQDLEQLASQPDFWDDQQAAQKQMRQLDDVKAQLEQLERWKAAVSDAE 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L+E + L ++ +++ + E LLSG D A L ++AGAGGT++ Sbjct: 63 ATLELHELEPDGDLLEEANAGLTSLRGDLDRWELERLLSGPYDKEGAVLTINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDHGMTVSVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I + D I T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQ+VKDLRT E T V+DGDLD F+++ L Sbjct: 303 QIRNYVFHPYQLVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343 >gi|225872704|ref|YP_002754161.1| peptide chain release factor 2, programmed frameshift [Acidobacterium capsulatum ATCC 51196] gi|225792505|gb|ACO32595.1| peptide chain release factor 2, programmed frameshift [Acidobacterium capsulatum ATCC 51196] Length = 384 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 178/357 (49%), Positives = 233/357 (65%), Gaps = 5/357 (1%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 Q+ L L+ + TK DP LW N ++ LMR+R+ ++ +++ E+ Sbjct: 13 RDQVRDLREYLCPARLRSELAAIETKLADPALWSNPQLSQPLMRDRKRIEEQLAYDTELA 72 Query: 64 DRLCDNLILLELALE-----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 R D ELA E E D ++ + S + + VE + ++LSGE D+ +A Sbjct: 73 RRSGDIDAYFELARESEAAGEADANLEADLSREISALGEYVEKLESRTMLSGETDALNAI 132 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + VH GAGGTESQDWA ML+RMY RWAE++ FKTE + DGEEAGIKSAT I G A+ Sbjct: 133 VTVHPGAGGTESQDWAEMLMRMYLRWAEQQGFKTEMNDYQDGEEAGIKSATFTIIGDYAF 192 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L GE GVHRLVRISP+D RRHTSF+S++V P +DDSI+I+I + R DTYR+ G Sbjct: 193 GQLSGETGVHRLVRISPFDQAKRRHTSFASVFVSPEIDDSIQIDIKPDELRTDTYRSGGK 252 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAVRITHIPTG+VVQCQ ERSQHKN+ +A MLR++LYE EL K++ Sbjct: 253 GGQHVNTTDSAVRITHIPTGIVVQCQNERSQHKNREKAMKMLRSRLYEYELAKKQAETKK 312 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 E SK +I +G QIRSYVLQPY++ KD RT +E VLDG LD F++ L +++ Sbjct: 313 LEDSKLDINFGSQIRSYVLQPYRIAKDHRTKVEVGDVDRVLDGYLDPFIRGYLTMRR 369 >gi|270292341|ref|ZP_06198552.1| peptide chain release factor 2, programmed [Streptococcus sp. M143] gi|270278320|gb|EFA24166.1| peptide chain release factor 2, programmed [Streptococcus sp. M143] Length = 329 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 154/329 (46%), Positives = 211/329 (64%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + +++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVR 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|119947032|ref|YP_944712.1| peptide chain release factor 2 [Psychromonas ingrahamii 37] gi|119865636|gb|ABM05113.1| bacterial peptide chain release factor 2 (bRF-2) [Psychromonas ingrahamii 37] Length = 329 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 222/325 (68%), Gaps = 1/325 (0%) Query: 28 TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE 87 + E P +W A+ L +ER L+ + I + D L+L+E+A EE+D E Sbjct: 3 RELESPEVWSEPERAQALGKERSALELVVDTIDALSAGTEDILMLVEMATEENDQDSFDE 62 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + ++ ++E +F + SG D+ YL++ +G+GGTE+QDWAN+LLRMY RW E Sbjct: 63 AQKEVNELEKKLEVLEFRRMFSGNHDACSCYLDIQSGSGGTEAQDWANILLRMYLRWGEA 122 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +KTE +E+ G+ AGIK AT+ G A+GWL+ E GVHRLVR SP+DS+ RRHTSF+ Sbjct: 123 HGYKTELMEVSAGDVAGIKGATIRFTGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFA 182 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S ++YP ++D I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +R Sbjct: 183 SAFIYPEIEDDIDIQINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDR 242 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK QA L+AKLYE ELQK+ I E SK++IGWG QIRSYVL +KDLR Sbjct: 243 SQHKNKDQAMKQLKAKLYEHELQKQNAEKQISEDSKSDIGWGSQIRSYVLDD-ARIKDLR 301 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 T IE + VLDG LD F++A+L Sbjct: 302 TGIESRNTQAVLDGGLDKFIEASLK 326 >gi|57234653|ref|YP_181313.1| peptide chain release factor 2, programmed frameshift [Dehalococcoides ethenogenes 195] gi|57225101|gb|AAW40158.1| peptide chain release factor 2, programmed frameshift [Dehalococcoides ethenogenes 195] Length = 362 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 150/351 (42%), Positives = 211/351 (60%), Gaps = 2/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ D ++ L + + P WQ+ A+ M++ + Sbjct: 7 ELKSRILSDMVRLDIAAKELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRG 66 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D L L L E D S+ E + + E++ + SG+ DS +A L V Sbjct: 67 LEQRVNDLLELFALTHE--DPSLGNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTV 124 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGG ESQDWA MLLRM+ RWAEK+ F E L+ GEEAGIKSATL I+G AYG+L Sbjct: 125 HAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFL 184 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRL+R+SP+D++ RHTSF+ + V P +DS++I+I D +ID +R+SG GGQ Sbjct: 185 KSEHGVHRLIRLSPFDADHARHTSFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQ 244 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +V +AVR+THIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR E + Sbjct: 245 NVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKG 304 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + WG QIRSYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 305 ERISAEWGNQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFINAYLR 355 >gi|227502940|ref|ZP_03932989.1| peptide chain release factor 2 [Corynebacterium accolens ATCC 49725] gi|227076362|gb|EEI14325.1| peptide chain release factor 2 [Corynebacterium accolens ATCC 49725] Length = 367 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 217/353 (61%), Gaps = 4/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 11 QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE S+ E +L ++ +E + ++LSGE D +A + + Sbjct: 71 LRGRLDDMPVMYELAEEEGTVSVADE---DLAELESAIESLEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWA K K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVR+SP+D+ RR TSF+ + V PVV+ + I++ +++ R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAELDALG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F++A + + Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGIRWR 359 >gi|295100603|emb|CBK98148.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium prausnitzii L2-6] Length = 373 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 147/347 (42%), Positives = 214/347 (61%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L D + +R+ L P + + +K + E L ++ +++Q Sbjct: 18 VKDLEEALAIDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L + EE D ++ E + + + V+ Q ++L+GE D ++A L HAG G Sbjct: 78 DDAETMLVMLDEEYDPEMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML RMY +WA+ E L+ DG+EAG+KSA++++KG NAYG LK E G Sbjct: 138 GTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++I D + YR+SGAGGQH+N T Sbjct: 198 VHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVYRSSGAGGQHINKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+ H PTG+VV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + EI Sbjct: 258 SSAVRLIHKPTGIVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEI 317 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 318 AWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364 >gi|332686413|ref|YP_004456187.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311] gi|332370422|dbj|BAK21378.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311] Length = 328 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 D + W N +A+ ++ E ++ D L + I+ EL + D +I E Sbjct: 1 MADVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYELQQVDFDEAIQTELI 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++++ +++ + LL+G D N+A +E H GAGGTESQDW +MLLRMY RWAE R Sbjct: 61 QRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAESRN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQIEVLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +D++IEI+I+ D ++DTYRASGAGGQH+N T+SAVRITHIPT VV Q +RSQ Sbjct: 181 DIMPELDETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVVSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA L++KLY+LE++K+ + + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D+F+ A L + Sbjct: 301 METGNVQAVMDGEIDNFIDAYLKWQ 325 >gi|212702489|ref|ZP_03310617.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098] gi|212674150|gb|EEB34633.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098] Length = 366 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 168/347 (48%), Positives = 227/347 (65%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD + QRL+ + T+ P+ W N L+RE++ L++ ++ + ++ Sbjct: 15 TTFGGVFDVAASEQRLAAIETELSRPNAWDNPEALTPLLREKRQLEDEVARLNALKTCHD 74 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D LELA+E + L+ + + ++ + LLSGE D+ DA LE+H GAGG Sbjct: 75 DMHEWLELAVESGEDEALESLAKQQDSLDALLDETELVMLLSGEEDNQDAILEIHPGAGG 134 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDWA MLLRMYTRWA +R F E L+ G+EAGIKS TL I GP+A+G+LK E+G+ Sbjct: 135 TESQDWAEMLLRMYTRWAARRHFTVEELDYLPGDEAGIKSVTLRISGPHAFGFLKSERGI 194 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D++ RRHTSF+S+ V P V D I+++I E+D R DT+R+SG GGQ VNTT Sbjct: 195 HRLIRISPFDASGRRHTSFASVDVMPDVGDDIQLDIKETDLRFDTFRSSGPGGQSVNTTS 254 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+ QCQ E+SQH NK A +L+A+LY LELQKRE + K I Sbjct: 255 SAVRVTHIPTGISAQCQNEKSQHHNKEAALCILKARLYNLELQKREAERAAQYAGKDAIA 314 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +G QIR+Y LQPY++VKD RTN E VLDG +D F L + Sbjct: 315 FGSQIRTYTLQPYRLVKDHRTNSECGDVEAVLDGQIDQFQHDYLLYR 361 >gi|169832431|ref|YP_001694217.1| peptide chain release factor 2 [Streptococcus pneumoniae Hungary19A-6] gi|172079637|ref|ZP_02709786.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC1873-00] gi|183603431|ref|ZP_02717047.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC3059-06] gi|183603478|ref|ZP_02714985.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC0288-04] gi|225854263|ref|YP_002735775.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA] gi|237650402|ref|ZP_04524654.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974] gi|237822484|ref|ZP_04598329.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974M2] gi|303260019|ref|ZP_07345993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293] gi|303261425|ref|ZP_07347373.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS292] gi|303264092|ref|ZP_07350013.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397] gi|303266295|ref|ZP_07352186.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457] gi|303269536|ref|ZP_07355300.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458] gi|307127694|ref|YP_003879725.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B] gi|168994933|gb|ACA35545.1| peptide chain release factor 2 [Streptococcus pneumoniae Hungary19A-6] gi|172041988|gb|EDT50034.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC1873-00] gi|183574752|gb|EDT95280.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC0288-04] gi|183576822|gb|EDT97350.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC3059-06] gi|225722944|gb|ACO18797.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA] gi|302637559|gb|EFL68046.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS292] gi|302638938|gb|EFL69399.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293] gi|302640921|gb|EFL71304.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458] gi|302644225|gb|EFL74481.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457] gi|302646497|gb|EFL76723.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397] gi|306484756|gb|ADM91625.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B] Length = 329 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 154/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|15594420|ref|NP_212208.1| peptide chain release factor 2 [Borrelia burgdorferi B31] gi|2687953|gb|AAC66459.1| peptide chain release factor 2 (prfB) [Borrelia burgdorferi B31] Length = 348 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 155/347 (44%), Positives = 222/347 (63%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 3 KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L E+A E D + L+ ++ + + S E D+N+A+L +H+GAGG Sbjct: 63 DLSDLCEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTS 238 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345 >gi|325287611|ref|YP_004263401.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489] gi|324323065|gb|ADY30530.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489] Length = 365 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 158/351 (45%), Positives = 225/351 (64%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D D + + KT P W N A+ M+ Q + + Sbjct: 10 LLDRLGALRRYLDIDAKLIEIENEEEKTLAPDFWNNAQVAQAQMKVLQSKKKWVKDFDDA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D +LLE E D +E ++ + K +E +F+++LS E D A L++ Sbjct: 70 KILIADLEVLLEFLKEGD--VTAEEVENHYNKAKTHIEDLEFKNMLSDEGDELTAILQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML+RMY WAEK +K + L +G+ AGIK+ TL I+G A+GWLK Sbjct: 128 AGAGGTESCDWAAMLMRMYLMWAEKNGYKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEIEI+ +D I T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIEINPADIEITTARSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+ + C RSQH N+A A ML+++LYE+EL+K++E + E+ Sbjct: 248 VNKVETKVQLTHKPTGIQISCSDSRSQHDNRATAMKMLKSQLYEIELRKKQEARSEIEAG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIR+YV+ PY++VKD+RT E + V+DG +D F+KA L + Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTAEETGNVDAVMDGQIDPFLKAYLMM 358 >gi|260655334|ref|ZP_05860822.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1] gi|260629782|gb|EEX47976.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1] Length = 348 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 165/349 (47%), Positives = 219/349 (62%), Gaps = 1/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + FD + ++ L ++ DP W +AK + + L++++ ++ Sbjct: 1 MRTCRTAFDPEGLRRQADELRLRSSDPAFWS-TGDAKEVSSQLSRLESSLEHWDHLERMF 59 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + EL +DD + E EVE++Q + LLS DS DA + +HAG+G Sbjct: 60 SDLETMAELLEIDDDPELAAEFDAKSGEYSREVEHRQMDLLLSEAYDSRDAIVTIHAGSG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G +SQDWA ML RMY RW E+ +KT L++ EEAG+KS T + G AYG+LK E G Sbjct: 120 GLDSQDWAEMLYRMYLRWCEENGYKTRLLDLQQDEEAGLKSVTFTVSGSCAYGYLKSETG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+D+N RRHTSFS + V P + D +E+ I + D RIDTYR+SGAGGQHVN T Sbjct: 180 VHRLVRISPFDTNKRRHTSFSGVVVSPQLPDDVEVAIRDEDLRIDTYRSSGAGGQHVNMT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ ERSQH NKA A +LR+KLY+L++Q R + + K E Sbjct: 240 DSAVRITHLPTGIVVSCQNERSQHMNKATAMQVLRSKLYDLQVQNRRQELDDLAGEKKES 299 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG QIRSYVLQPY +VKD RT E + + VLDGDLD F+ A L +K Sbjct: 300 SWGHQIRSYVLQPYTLVKDHRTGEETGNVAAVLDGDLDRFILAYLRWRK 348 >gi|225450605|ref|XP_002277995.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 434 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 232/352 (65%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++ + W V RL L+ + P LW N + A + RE L + +K + Sbjct: 72 IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 131 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EE+D + E+ L ++ + K+ E+LL+G+ DS Y+EV Sbjct: 132 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 191 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M+++MY WA++R + ++ GE AGIK AT+ + G ++G+ K Sbjct: 192 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 251 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P++ D S ++I+ESD RI+ +RA GAGGQ Sbjct: 252 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 311 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRI HIPTGV CQ ERSQH+NKA A +L+++L +LE+ ++ +I Sbjct: 312 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 371 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S T+I WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 372 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 423 >gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074] gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074] Length = 371 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA EDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RSRLDDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|221195492|ref|ZP_03568547.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626] gi|221184679|gb|EEE17071.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626] Length = 371 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 204/353 (57%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L+ + D + ++ L + W + A+ M L + ++ I Sbjct: 12 LTARLDEVESYLHIDEKREEIASLTQISAKADFWNDADFARQTMARLASLKDDVAGIDAA 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +L D LEL E +D +L E+ + ++ + S + E D DA + V Sbjct: 72 HAKLEDAKAALELGSETEDAGLLAESEHLADSLARDLSELELSSWFTDELDHGDAIVTVK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+QDWA+ML MY R+A +R + + E E GI AT + G NAYG L+ Sbjct: 132 PGQGGLEAQDWADMLFHMYLRYAARRGWSVDIAEATPAEVIGIDRATFTVSGKNAYGMLR 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRLVRISP D RR TSF+ + V PV+ IE++I SD RID Y ASG GGQ Sbjct: 192 AEQGVHRLVRISPTDDKKRRQTSFAGVEVLPVLPAEIEVDIDPSDLRIDVYHASGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTGVVV CQ ERSQ +NKA A N+LR++LYE+E +KRE + Sbjct: 252 VNTTDSAVRITHIPTGVVVTCQNERSQLQNKAAAMNILRSRLYEIEREKREAELDELRGP 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354 K EI +G QIRSYVL PYQ+VKDLRT E + VL DGDLD F+ A + Sbjct: 312 KHEISFGNQIRSYVLYPYQLVKDLRTGEETGNVDAVLDDGDLDPFIIAYHRWR 364 >gi|322376937|ref|ZP_08051430.1| peptide chain release factor 2 [Streptococcus sp. M334] gi|321282744|gb|EFX59751.1| peptide chain release factor 2 [Streptococcus sp. M334] Length = 329 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 154/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVQ 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 EELVTQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|307718929|ref|YP_003874461.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192] gi|306532654|gb|ADN02188.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192] Length = 361 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 168/349 (48%), Positives = 230/349 (65%), Gaps = 1/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R+ GG+F+ + +++S L +T P LW + A+ ++ + L + Sbjct: 1 MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L +LA EE+D S +E L + + + LL+ E D DAYL +H Sbjct: 61 VQEVEDIHTLYDLAAEENDPSQEEELRQQLAEAERKFRELRLRELLNEEYDQKDAYLTIH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG A+G+LK Sbjct: 121 AGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKGDYAFGYLK 179 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I D RIDTYR+ GAGGQH Sbjct: 180 GEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGAGGQH 239 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PTG+VVQCQ ERSQHKN+ A MLR++LYE Q REE Sbjct: 240 VNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEKKAIE 299 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV QPY MVKDLRT +E + V+DGDLD F++A L Sbjct: 300 KKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYL 348 >gi|300114892|ref|YP_003761467.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113] gi|299540829|gb|ADJ29146.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113] Length = 331 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 172/328 (52%), Positives = 229/328 (69%), Gaps = 1/328 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 ++ + P +W A+ L +ER L + +S + E+ + + L ELA+EEDD Sbjct: 2 EVDRELAVPSVWDEPERAQQLGQERAQLQSVVSPLAELGEEIMQAKELFELAVEEDDEGT 61 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 QE L ++ + +F+ + +GE D N+AYL++ AG+GGTE+QDWA+MLLRMY RW Sbjct: 62 AQEMIAELDAVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWASMLLRMYLRW 121 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 EK FKT E+ +GE AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHT Sbjct: 122 GEKHDFKTGLTEVSEGEVAGIKSATIHFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHT 181 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S++VYP VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+ + +VVQCQ Sbjct: 182 SFASVFVYPEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLSSNLVVQCQ 241 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQH+NKA A LRAKLYELE++ R+ E +K +IGWG QIR+YVL +K Sbjct: 242 SERSQHQNKAHAMAQLRAKLYELEMRSRQAEKQAAEEAKADIGWGSQIRNYVL-DQSRIK 300 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 DLRT +E + VLDGDLD F++A+L Sbjct: 301 DLRTGVEIGNTQGVLDGDLDPFIEASLK 328 >gi|147679087|ref|YP_001213302.1| protein chain release factor B [Pelotomaculum thermopropionicum SI] gi|146275184|dbj|BAF60933.1| protein chain release factor B [Pelotomaculum thermopropionicum SI] Length = 336 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 158/327 (48%), Positives = 215/327 (65%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + +P W +A+ ++ L + ++ + + L D +L EL EE+D + Sbjct: 2 LERQMLEPGFWDGQEKAQKAVQRLSSLRDRVAVFQRLDKDLEDLEVLAELGEEEEDEAAA 61 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + +V + LLSG D +A + +HAGAGGTE+QDW MLLRMYTRWA Sbjct: 62 AEVKQGLAVVAQKVAEMELTVLLSGPYDRGNAIVALHAGAGGTEAQDWVEMLLRMYTRWA 121 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+R FK E L++ G+EAG KSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+ RRHTS Sbjct: 122 ERRGFKVEVLDLLPGDEAGTKSATIEVIGPNAYGYLRSEKGVHRLVRISPFDAAGRRHTS 181 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P VDD ++++I+ D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ Sbjct: 182 FASVDVLPEVDDEVDVKINPDDLKIDTFRSGGAGGQHVNKTDSAVRITHLPTGIVVTCQN 241 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ N+ A ML+A+L +LEL+K+E + EI WG QIRSYV PY +VKD Sbjct: 242 ERSQLANRLAAMKMLKARLIDLELRKKEAELAALRGEQQEIAWGSQIRSYVFHPYSLVKD 301 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 RT E + V+DG++D F+ A L Sbjct: 302 HRTGHETGNVGAVMDGEIDSFIAAYLR 328 >gi|118475480|ref|YP_892510.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus 82-40] gi|166223624|sp|A0RQM7|RF2_CAMFF RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|118414706|gb|ABK83126.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus 82-40] Length = 369 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 167/354 (47%), Positives = 229/354 (64%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL+ ++ + + + RL + P W ++ +A + +E+ + N + K Sbjct: 12 KLNTKVQNISRVIKPQDIEIRLKEIEDIENRPEFWNDIKKASEIGKEKTKISNMLCKFKN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L ELA EDD + ++ Q ++ ++ + +LSGE DS +A + + Sbjct: 72 VKSAISDAYELYELANAEDDEQTINSLFEDAQNLENKITNLEISMMLSGEDDSKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+K + ++KG NAYG+L Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P VDD I IEI E D R+D YRASGAGGQ Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEVDDDIAIEIEEKDLRLDYYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VVQCQ +RSQHKNKA A ML+++LYE EL K++E N Sbjct: 252 HVNKTESAVRITHIPTGIVVQCQNDRSQHKNKATAMKMLKSRLYEFELMKQQEANNAI-- 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ +++ L +K Sbjct: 310 EKSEIGWGHQIRSYVLFPYQQVKDTRSGEAYSQTDAILDGDIKKIIESVLISQK 363 >gi|323489912|ref|ZP_08095134.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2] gi|323396419|gb|EGA89243.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2] Length = 327 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 214/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N A+ ++ E L ++ + + + LEL EEDD + ++ Sbjct: 1 MLDPDFWNNQETAQTVISELNGLKEVVNAYYSFMETQENMEMSLELLREEDDEDLHEDVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++++ ++ + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 KDMKQFISDLADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAG+KS TL I+G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH PTG VV CQQERSQ Sbjct: 181 EVMPEFTGEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHAPTGAVVTCQQERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY L++++ E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNREKAMQMLKAKLYALKIEEEEARLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ + L K Sbjct: 301 FETGNLGAVMDGDIDGFINSLLRSK 325 >gi|319407240|emb|CBI80879.1| peptide chain release factor RF-2 [Bartonella sp. 1-1C] Length = 333 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 216/320 (67%), Positives = 264/320 (82%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 LW + +A+ +MRERQ+L+++++ + L + + L+ + EE+D I+ E + +++ Sbjct: 2 LWNDARKAQDMMRERQNLEDSMNSTQLFTQTLEECIELIAMGEEENDVEIITEAENTIRQ 61 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +K E++ KQ +LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E Sbjct: 62 LKSEIDKKQIATLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPV 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VD++IEI++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI T +VVQCQ ERSQHKNKA Sbjct: 182 VDENIEIDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTDIVVQCQTERSQHKNKA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 AW+MLRA+LYE EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T Sbjct: 242 TAWSMLRARLYEEELKKREEATNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301 Query: 335 PSDVLDGDLDDFMKATLAIK 354 P VL+GDLD F++A LA + Sbjct: 302 PQTVLNGDLDTFIEAALAQR 321 >gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74] gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74] Length = 371 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D + ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLGKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D +E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T + P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHTPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ +E N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQEKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|163759373|ref|ZP_02166459.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43] gi|162283777|gb|EDQ34062.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43] Length = 321 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 226/309 (73%), Positives = 263/309 (85%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ +K + +L DNL L+E+ EE D I++E L+ ++ +V +Q E Sbjct: 1 MRERQQLEDSINGLKRTEAQLSDNLELIEMGEEEGDSDIVREAEAALKELRADVTKQQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+ K E LEIHDGEEAGI Sbjct: 61 SLLSGEADANDTYLEVHSGAGGTESQDWANMLLRMYTRWAERSGMKVELLEIHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSFSSIW YPV+DDSI+++I+E Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSQARRHTSFSSIWTYPVIDDSIDVDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 S+CRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y Sbjct: 181 SECRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARIY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKTEIGWG QIRSYVLQPYQ+VKDLRT E TSP DVLDG LD Sbjct: 241 EAELKKREEAANDEAASKTEIGWGHQIRSYVLQPYQLVKDLRTGTESTSPQDVLDGKLDP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAQR 309 >gi|320161067|ref|YP_004174291.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1] gi|319994920|dbj|BAJ63691.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1] Length = 351 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 156/346 (45%), Positives = 219/346 (63%), Gaps = 5/346 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD + L L + E+P +W + A+ LM+ L I + R D L Sbjct: 4 RSIFDLSSREMLLEQLQKEAENPGIWDDPTSAQRLMKRIADLREEIEGWNQFLKRCQDGL 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E +D S+ ++ + ++ E++ ++ +LLSG D +A L ++AGAGGT+S Sbjct: 64 ELAE----SEDESLREDLEKEISALEKELQQRELTTLLSGPYDHENALLTINAGAGGTDS 119 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML+RMY RW E+R F +E L+ +GEEAGIKS T+ + GP AYG+L+GE+GVHRL Sbjct: 120 QDWASMLMRMYLRWCERRGFDSEILDFSEGEEAGIKSVTIAVTGPYAYGYLRGEKGVHRL 179 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VR+SP+D+ RRHTSF+ + V P + + EI+I+ D RID YR+S AGGQ+V +A Sbjct: 180 VRLSPFDAAHRRHTSFAQVEVLPEISNGDNEIQINPDDLRIDIYRSSSAGGQNVQKNATA 239 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+VV CQ ERSQ +N+ A +LRA+L EL+ Q++E + WG Sbjct: 240 VRITHIPTGIVVSCQNERSQMQNRENAMRVLRARLAELKRQEQERQLAELRGEYIKAEWG 299 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYVL PYQ+VKD RT E + VLDG+LD F++A L +K Sbjct: 300 SQIRSYVLHPYQLVKDHRTEYETGNTQAVLDGELDGFIEAYLRSQK 345 >gi|167626878|ref|YP_001677378.1| peptide chain release factor 2 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596879|gb|ABZ86877.1| peptide chain release factor 2 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 346 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 177/346 (51%), Positives = 241/346 (69%), Gaps = 3/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 +N G +FD+D +RL+ + + ED +W N A+ L R++ L+N + + I + L Sbjct: 1 MNLYGTIFDYDVKKERLTEVLMELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 LL L E+D S++QE + + Q + E+E +F + SG+ D N+A+L++ +G+G Sbjct: 61 ETLTELL--ELAEEDESLMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSG 118 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML+RMY RWA+ FK ++ DG+ AGIK TL ++G AYGWL+ E G Sbjct: 119 GTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN T Sbjct: 179 IHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPT +VVQ Q +RSQHKN+ A L++KLYE+ELQKR N E SK +I Sbjct: 239 DSAVRITHIPTNIVVQSQSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADI 298 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E T+ VLDGDLD F++A+L Sbjct: 299 GWGSQIRSYVL-DQSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 343 >gi|306833909|ref|ZP_07467033.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338] gi|304423910|gb|EFM27052.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338] Length = 325 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 150/325 (46%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L E+Q+ + + LE+ ++D S+ E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEML--DEDDSVQAELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L+++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 59 ESLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSFSS+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFSSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RT Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD+D F+ A L + Sbjct: 299 YEIAQVDKVMDGDIDGFIDAYLKWR 323 >gi|317153200|ref|YP_004121248.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2] gi|316943451|gb|ADU62502.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2] Length = 391 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 164/342 (47%), Positives = 215/342 (62%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG FD+ RL + + P W L+RE+ L + ++ + + D Sbjct: 40 FGGGFDYAETKTRLEAIEHQLSKPGAWDKPGALTPLLREKTQLSDKLAMYESLAQAKDDL 99 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LELA E D + + K + + ++ + E D +A LE+H GAGG E Sbjct: 100 DAWLELAHESRDEEAMAGLDGQISVFKERLGITELATMFAFEHDKGNAILEIHPGAGGVE 159 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWA MLLRMYTR+AE++ FK L+ GEEAGIKS TL I+G +YG LKGE GVHR Sbjct: 160 SQDWAEMLLRMYTRFAERKGFKITQLDYQVGEEAGIKSVTLQIEGLYSYGLLKGESGVHR 219 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 L+RISP+DS+ RRHTSF+S+ VYP +DD IEIE+ + D RID +R+SG GGQ VN T SA Sbjct: 220 LIRISPFDSSGRRHTSFASVDVYPDMDDDIEIEVRDEDLRIDVFRSSGPGGQSVNKTSSA 279 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+V QCQ E+SQH+NKA A +++A+LYE ELQK EE +K I WG Sbjct: 280 VRITHLPTGIVAQCQNEKSQHRNKATALRLVKARLYERELQKIEESRRQDYQAKGAIAWG 339 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+Y LQPY++VKD R+N E + LDGDLD ++ L Sbjct: 340 SQIRTYTLQPYRLVKDHRSNSETGNVDAFLDGDLDAMIRNHL 381 >gi|315612838|ref|ZP_07887749.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC 49296] gi|315314948|gb|EFU62989.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC 49296] Length = 329 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 154/329 (46%), Positives = 211/329 (64%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + +++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|260427583|ref|ZP_05781562.1| peptide chain release factor 2 [Citreicella sp. SE45] gi|260422075|gb|EEX15326.1| peptide chain release factor 2 [Citreicella sp. SE45] Length = 397 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 191/353 (54%), Positives = 241/353 (68%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ LG DW+ A RL N + EDP+LW + A+ LMR+RQ L +A+ Sbjct: 35 KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQMLVDAMETYSS 94 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+E+ E+D ++ E L+ + + K+ E+LL GEAD ND +LE+ Sbjct: 95 IKQELSDNVELIEMGEMEEDDEVVSEAEAALRALAEKAGQKELEALLDGEADGNDTFLEI 154 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTE+ DWA ML RMY RWAEKR + E G EAG KS I G NAYGWL Sbjct: 155 NAGAGGTEACDWAAMLQRMYVRWAEKRGYDVELQFEEAGAEAGTKSCGYKISGTNAYGWL 214 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+ R TSF+S+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ Sbjct: 215 KSESGVHRLVRISPFG-KGTRETSFASVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 273 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPT +VV E+SQH+N+ A L+++LY++EL KR N Sbjct: 274 HVNTTDSAVRITHIPTNIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRNAEINAQHE 332 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA + Sbjct: 333 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQQ 385 >gi|148240661|ref|YP_001226048.1| peptide chain release factor 2 [Synechococcus sp. WH 7803] gi|147849200|emb|CAK24751.1| Protein chain release factor B [Synechococcus sp. WH 7803] Length = 356 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 148/342 (43%), Positives = 206/342 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + + Q + D Sbjct: 3 RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLDTWQGAVSDAQ 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E L +++ +++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYDLEPDDDMLGEAQSGLTQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE R K E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++I+I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RILHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YV PYQMVKDLRT E V+DGDLD F++A L Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQGVMDGDLDPFIQALLR 344 >gi|154496274|ref|ZP_02034970.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC 29799] gi|150274357|gb|EDN01434.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC 29799] Length = 373 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 227/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L +L+ LG + A + L L +++ W N+ +A+ + + + L + + K+ Sbjct: 13 NLKPELDELGQALGLEAAERELEMLESESASDGFWNNLEKAQKIQQRIKQLHHKVDGQKK 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 D L L E+ EE+D S++ E + ++ +E + +L +GE D N+ L + Sbjct: 73 RLGEWEDLLTLCEMGNEEEDESLVPELEEGFNKLTANMEEARLSTLFTGEYDDNNVVLAI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDWA MLLRMYTRWAE+ F+ + ++ DG+EAGIKSAT++I+G NAYG L Sbjct: 133 HAGAGGTEAQDWAQMLLRMYTRWAERHDFEYQVVDFQDGDEAGIKSATVMIQGENAYGHL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR+SP+D+N+RR TSF+++ V P + + ++EI + + +R+SGAGGQ Sbjct: 193 RSEHGVHRLVRVSPFDANARRQTSFAAVEVMPDLPEDADVEIRPEEYEMQVFRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T SAVR+ H TG+VV CQ ERSQ +NK MLRAKL EL++Q+ E + + Sbjct: 253 HINKTSSAVRLIHHATGIVVSCQTERSQFQNKDTCLRMLRAKLVELKMQQHAEKLSDIKG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV PYQ+VKD R+ E ++ + V+DGD+D F+ A L + Sbjct: 313 VQLKIEWGSQIRSYVFMPYQLVKDNRSGFETSNVNGVMDGDIDGFINAYLKCE 365 >gi|116629958|ref|YP_815130.1| protein chain release factor B [Lactobacillus gasseri ATCC 33323] gi|238854078|ref|ZP_04644428.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4] gi|282851440|ref|ZP_06260805.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1] gi|311110410|ref|ZP_07711807.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22] gi|116095540|gb|ABJ60692.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus gasseri ATCC 33323] gi|238833312|gb|EEQ25599.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4] gi|282557408|gb|EFB63005.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1] gi|311065564|gb|EFQ45904.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22] Length = 332 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 151/324 (46%), Positives = 209/324 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+ L+ E + K ++++ D LEL + D + +E S Sbjct: 1 MAEPGFWDDQEQAQSLINETNRMKEKSENFKRLEEKFEDAQTALELLKADPDPELSEELS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A Sbjct: 61 KEMFSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEIEDYEPGEEAGVKSVSVRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NMLRAKL++LE +K+++ + ++ EIG+G QIRSYV PY MVKD RTN Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DG LDDF+ A L Sbjct: 301 FETSDVNGVMDGKLDDFIYAYLQW 324 >gi|225868809|ref|YP_002744757.1| peptide chain release factor 2 [Streptococcus equi subsp. zooepidemicus] gi|225702085|emb|CAW99717.1| peptide chain release factor 2 [Streptococcus equi subsp. zooepidemicus] Length = 338 Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats. Identities = 153/336 (45%), Positives = 215/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + + A+ +E L +Q+ + + LE+ Sbjct: 1 MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHNMQELSDETELYLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D S+ +E +L R+ + + LLS D ++A LE+H G+GGTE+QDWA+ML Sbjct: 59 DEDDSVKEELEASLTRLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLF 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ + FK E L+ G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|312130867|ref|YP_003998207.1| bacterial peptide chain release factor 2 (brf-2) [Leadbetterella byssophila DSM 17132] gi|311907413|gb|ADQ17854.1| bacterial peptide chain release factor 2 (bRF-2) [Leadbetterella byssophila DSM 17132] Length = 358 Score = 351 bits (902), Expect = 8e-95, Method: Composition-based stats. Identities = 157/352 (44%), Positives = 229/352 (65%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G+FD+DN ++L L + P W + A+ +++E Q L N +E Sbjct: 9 LRARVTALRGIFDYDNRKEKLGDLENQQAQPEFWNDSDHAQTVVKEIQVLKNWTEAYEEA 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L E E + +T ++ +E + + +LS E D A +E++ Sbjct: 69 EASISDLETLFEFYQEGEVEEEEVDT--EAKKTVQIIEELELKKMLSSEEDQFSAIIEIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML RMY WA+K +K ++ DG+ AGIKSA++ I GP AYG+LK Sbjct: 127 SGAGGTESQDWASMLYRMYLMWAQKHGYKVTQVDWTDGDGAGIKSASMQIDGPLAYGYLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S++ YP+VDD+IE+E+ ++D T R+ GAGGQ+ Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFASVYAYPLVDDTIEVEVKDADIEWQTSRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+V+ CQ ERSQ NK A NML+++LY++EL+KR E+S Sbjct: 247 VNKVETKVQLTHKPTGIVIVCQIERSQLANKEHAMNMLKSRLYQIELEKRNAARADIEAS 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIR+YV PY++VKD RT E + V+DG++DDF+KA L + Sbjct: 307 KKKIEWGSQIRNYVFHPYKLVKDARTGHETSDIQRVMDGEIDDFIKAYLMLD 358 >gi|88812905|ref|ZP_01128149.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231] gi|88789827|gb|EAR20950.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231] Length = 325 Score = 351 bits (902), Expect = 8e-95, Method: Composition-based stats. Identities = 175/324 (54%), Positives = 228/324 (70%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P +W + A L RER L +S ++ + L D LLELA E+D + L E Sbjct: 1 MEQPDVWNDPERAHELNRERVRLQTLVSSLERLTRGLADTAELLELARTENDEATLAELD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+E +F + SGE D +A+L++ AG+GGTE+QDWANMLLRMY RW E+++ Sbjct: 61 ADVTGYQSEIEALEFRRMFSGEMDERNAFLDIQAGSGGTEAQDWANMLLRMYLRWVEQKR 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E +E +GE AGIKSATL I+G A+GWL+ E GVHRLVR SP+DS +RRHTSF+++ Sbjct: 121 FTAEIIEFSEGEVAGIKSATLRIEGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V P +DD++E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQ Sbjct: 181 FVSPELDDAVEVEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTGIVTQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNKA A LRAKLYELE+ KR E A+ E SK +IGWG QIRSYVL +KDLRT Sbjct: 241 HKNKATAMKQLRAKLYELEMHKRREQADQVEESKADIGWGSQIRSYVL-DQSRIKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E VL+G LD F++A+L Sbjct: 300 VEIGHTQAVLNGALDPFIEASLKA 323 >gi|255542882|ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis] gi|223548465|gb|EEF49956.1| peptide chain release factor, putative [Ricinus communis] Length = 550 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 154/352 (43%), Positives = 226/352 (64%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W + RL L+ + P LW + + A + RE L + Sbjct: 142 IAQSIQVIKKRLQWKKLMVRLDLLSVQLNKPDLWDDPVLAGKISREHGSLMAKRKEVTAF 201 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EEDD + E+ L ++ + K+ E+LL+GE DS Y+EV Sbjct: 202 ERELLEHIDMIKLAREEDDAELESESLKALFHMRRNSKEKELEALLAGEQDSCSCYIEVQ 261 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA M+++MY WA++R + ++ GE AGIK AT+ + G A+G+ K Sbjct: 262 SGAGGTESMDWAKMVMQMYKLWAQRRGYNVTVVDEMPGEIAGIKRATIKVDGEYAFGYAK 321 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P++ D S ++I+ESD RI+ YR+ G GGQ Sbjct: 322 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTHVQINESDLRIERYRSGGPGGQ 381 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTT+SAVRI HIPTGV CQ ERSQH NKA A +L+++L +LE+ ++ ++ Sbjct: 382 HANTTESAVRIVHIPTGVTATCQNERSQHMNKASAMAVLQSRLDQLEMARQAQMNAQHTQ 441 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S TEI WG QIR+YVL PY+MVKDLRTN E + P VL+G++D F+ + L+ Sbjct: 442 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGEIDGFILSYLSA 493 >gi|145225030|ref|YP_001135708.1| peptide chain release factor 2 [Mycobacterium gilvum PYR-GCK] gi|189040001|sp|A4TDE5|RF2_MYCGI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|145217516|gb|ABP46920.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium gilvum PYR-GCK] Length = 372 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 155/355 (43%), Positives = 216/355 (60%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + + D R+ L + DP LW + A+ + + H N + ++E+ Sbjct: 12 LDTTLTTVERVVNVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE+ E L +++ ++ + +LLSGE D +A + Sbjct: 72 RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E + + + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEMDAL 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 312 KGDGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 365 >gi|25010633|ref|NP_735028.1| peptide chain release factor 2 [Streptococcus agalactiae NEM316] gi|23094987|emb|CAD46208.1| Unknown [Streptococcus agalactiae NEM316] gi|319744591|gb|EFV96943.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC 13813] Length = 337 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 149/336 (44%), Positives = 215/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ +E L +Q+ + +LLE+ Sbjct: 1 MEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D S+ +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LL Sbjct: 59 DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334 >gi|58039738|ref|YP_191702.1| peptide chain release factor 2 [Gluconobacter oxydans 621H] gi|58002152|gb|AAW61046.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Gluconobacter oxydans 621H] Length = 322 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 199/307 (64%), Positives = 245/307 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L N I ++ I+ + L L+ELA E D S++Q+ L+ I +V ++ E Sbjct: 1 MRERTTLANQIEGVQRIESEVEGTLELVELAEMEGDESLVQDAVQTLRAIAEDVRKREIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEADSND Y+EV+AGAGGTE+QDWA MLLRMYTRWAE+ +K +E +GE+AGI Sbjct: 61 SLLSGEADSNDCYVEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTFIEGSEGEQAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEI+I++ Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIDIND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT+RASGAGGQHVN TDSA+RITHIPTG+VV CQ +RSQH+N+A+A MLRA++Y Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLRARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKRE A E+SKT+IGWG QIRSYVL PYQ+VKDLRT +EK +P VLDG LDD Sbjct: 241 EAELQKREAAAAQTEASKTDIGWGHQIRSYVLAPYQLVKDLRTGVEKGNPGAVLDGALDD 300 Query: 346 FMKATLA 352 FM A+LA Sbjct: 301 FMSASLA 307 >gi|295426388|ref|ZP_06819038.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM 11664] gi|295063756|gb|EFG54714.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM 11664] Length = 332 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 208/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P+ W + +A+ L+ E L E++ D LEL EE D + +E Sbjct: 1 MAEPNFWNDQDQAQKLISETNLLKEKRDSFLELKKEYEDETTALELIKEEPDKELQEEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +NL ++ + + L+SG+ DS++A +E+H GAGGTE+ DWA+MLLRMY R+ E Sbjct: 61 NNLTHLQSAFHNYELDLLMSGKYDSHNALVEIHPGAGGTEAMDWASMLLRMYQRYCESVG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS ++ + G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGVKSVSIRVSGKNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRTN Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG L F+ A L + Sbjct: 301 YETADVKGVMDGKLQPFIYAYLQWR 325 >gi|223038905|ref|ZP_03609197.1| peptide chain release factor 2 [Campylobacter rectus RM3267] gi|222879878|gb|EEF14967.1| peptide chain release factor 2 [Campylobacter rectus RM3267] Length = 366 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 166/353 (47%), Positives = 228/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ + G+ ++ RL + D + WQ++ +A + +E+ + N ++ Sbjct: 13 LNTKIENIAGVVKPESIKTRLKEIEELENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L ELA E+D + ++ ++ + LLSGE D +A + +H Sbjct: 73 KSAVDDAKDLYELANSENDEETINSLFAEAGELEDKIVNLEISMLLSGEDDGKNAIVTIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + ++KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML+++LYELEL K++E A G Sbjct: 253 VNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAA--GSIE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363 >gi|188582408|ref|YP_001925853.1| peptide chain release factor 2 [Methylobacterium populi BJ001] gi|179345906|gb|ACB81318.1| peptide chain release factor 2 [Methylobacterium populi BJ001] Length = 321 Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats. Identities = 219/309 (70%), Positives = 254/309 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD A++ IK+++ L D L+EL E D + + E + ++ ++ E +Q E Sbjct: 1 MRERQELDEAVTAIKKLEQDLEDAATLIELGEMEGDQASITEGENAIKAVEKEAASRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI Sbjct: 61 TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T P +VLDGDLD Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300 Query: 346 FMKATLAIK 354 FM+A+LA + Sbjct: 301 FMEASLAQR 309 >gi|297171258|gb|ADI22265.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF0200_36I24] gi|297171357|gb|ADI22361.1| protein chain release factor B [uncultured nuHF2 cluster bacterium HF0500_02A10] Length = 334 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 163/323 (50%), Positives = 222/323 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W N +A ++ E L N + ++ ++ + + +L EDD + E Sbjct: 1 MATAGFWDNQDKASEVIAESNRLKNWVKPWHDLNTKVSELTEIRDLLEHEDDEDLTHELI 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +I+ +E + ++L G D A L VH GAGG ESQDWA ML RMY+RWAE Sbjct: 61 SEVDKIEGPIEDLELRTMLQGPDDHRGAILTVHPGAGGLESQDWAEMLTRMYSRWAENHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + L++ G+EAGIKSATL + G +AYG+LK E+G+HRLVRISP+D+ SRRHTSF+S+ Sbjct: 121 YDLNVLDMQPGDEAGIKSATLEVVGGHAYGYLKAEKGIHRLVRISPFDAQSRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 ++YP+VDD IEIEI+ESD R+DT+RASGAGGQHVN TDSA+RITHIPTG+ V CQQERSQ Sbjct: 181 FIYPLVDDEIEIEIAESDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIAVSCQQERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H N+A A ML+A LYE L+++E+ E++KT+IGWG QIRSYV QPY MV D RT+ Sbjct: 241 HMNRATAMKMLQASLYERALEEKEQEKEAIEATKTDIGWGNQIRSYVFQPYTMVNDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 ++ + + V+DG+LD F++A L Sbjct: 301 LKISDVNKVMDGNLDPFIEAYLK 323 >gi|304322131|ref|YP_003855774.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis HTCC2503] gi|303301033|gb|ADM10632.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis HTCC2503] Length = 315 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 208/309 (67%), Positives = 248/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER HL+N I+ + +Q L DNL L E+A E D + + + L +K + E Sbjct: 1 MQERTHLENQIAALTAMQTELDDNLELAEMAEAEGDDAAVDDIQAALADLKDRAGRAELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD+N+A++E+HAGAGGTES DWANML RMY RWA++ K + +E GEEAGI Sbjct: 61 ALLSGEADANNAFVEIHAGAGGTESNDWANMLYRMYVRWAQQHGHKVDIIEEQGGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+WVYP +DD+IEIE++E Sbjct: 121 KSATILVKGINAYGWLKVESGVHRLVRISPYDSNARRHTSFSSVWVYPEIDDNIEIEVAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCR+DT+RASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRVDTFRASGAGGQHVNTTDSAVRITHEPTGIVVQCQSERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ELQ+REE AN +SKT+IGWG QIRSYVLQPYQMVKDLRT +E SP VLDGDLD Sbjct: 241 EMELQRREEEANAQAASKTDIGWGHQIRSYVLQPYQMVKDLRTGVESPSPDAVLDGDLDA 300 Query: 346 FMKATLAIK 354 FM A LA + Sbjct: 301 FMGAALAQR 309 >gi|183603122|ref|ZP_02712622.2| peptide chain release factor 2 [Streptococcus pneumoniae SP195] gi|183573173|gb|EDT93701.1| peptide chain release factor 2 [Streptococcus pneumoniae SP195] Length = 329 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 153/329 (46%), Positives = 211/329 (64%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ + +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 299 HRTSYEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|255323494|ref|ZP_05364625.1| peptide chain release factor 2 [Campylobacter showae RM3277] gi|255299531|gb|EET78817.1| peptide chain release factor 2 [Campylobacter showae RM3277] Length = 366 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 166/353 (47%), Positives = 228/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ + G+ ++ RL + D + WQ++ +A + +E+ + N ++ Sbjct: 13 LNTKVENIAGVVKPESIKARLKEIEEMENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L ELA E+D + ++ ++ + LLSGE D +A + +H Sbjct: 73 KSAVDDAKELYELANSENDEETINSLFAEADELEDKIVNLEISMLLSGEDDGKNAIVTIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + ++KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML+++LYELEL K++E A G Sbjct: 253 VNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAA--GSIE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363 >gi|270307933|ref|YP_003329991.1| peptide chain release factor 2 [Dehalococcoides sp. VS] gi|270153825|gb|ACZ61663.1| peptide chain release factor 2 [Dehalococcoides sp. VS] Length = 357 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 148/352 (42%), Positives = 209/352 (59%), Gaps = 2/352 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M L + FD ++ L + P WQ+ A+ +M++ + Sbjct: 1 MNLRAAFFLIWCDFDVSAKELEITELENASASPDFWQDQQNAQRVMKKLAANKRTSELWR 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ R+ D L L+ E D S+ E + + E+ + SG+ D+ +A L Sbjct: 61 GLERRVNDLTELAVLSYE--DPSLSNEIEHEISGLTAELNSLEVGLAFSGQYDNRNALLT 118 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 VHAGAGG ESQDWA MLLRM+ RWAEK+ F E L+ GEEAG+KSATL I G AYG+ Sbjct: 119 VHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEILDQSPGEEAGVKSATLQIDGEYAYGF 178 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRL+R+SP+D++ RHTSF+ + + P +DS++I+I D +I+ +R+SG GG Sbjct: 179 LKSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIEMFRSSGPGG 238 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+V +AVRITHIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR E + Sbjct: 239 QNVQKVSTAVRITHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLK 298 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + WG QIRSYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 299 GERISAEWGNQIRSYVLHPYKMVKDHRTDYEVGNAETVLEGELDGFINAYLR 350 >gi|168182216|ref|ZP_02616880.1| peptide chain release factor 2 [Clostridium botulinum Bf] gi|237793493|ref|YP_002861045.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657] gi|182674541|gb|EDT86502.1| peptide chain release factor 2 [Clostridium botulinum Bf] gi|229262967|gb|ACQ54000.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657] Length = 325 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 151/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322 >gi|299782886|gb|ADJ40884.1| Peptide chain release factor RF2 [Lactobacillus fermentum CECT 5716] Length = 332 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 162/324 (50%), Positives = 207/324 (63%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ + L +QD++ + + E+ E D + E Sbjct: 1 MTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAEMLQAEPDPELKAELD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 DN ++ + + E LL G D +DA LE+H GAGGTE+QDW MLLRMY RWA + Sbjct: 61 DNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYMRWANQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E GEEAGIKS TLLIKG NAYG+L E+GVHRLVRISP+DS +RRHTSF+S+ Sbjct: 121 FAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P++D+SIE+EI SD R+DT+RASGAGGQH+N T+SAVRITH+PTG+V Q ERSQ Sbjct: 181 DVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYTLVKDARTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E V+DGDLD F+ A L Sbjct: 301 YETHDVIGVMDGDLDPFINAYLQW 324 >gi|111658353|ref|ZP_01409041.1| hypothetical protein SpneT_02000493 [Streptococcus pneumoniae TIGR4] gi|148997169|ref|ZP_01824823.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70] gi|149010619|ref|ZP_01831990.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75] gi|221231551|ref|YP_002510703.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC 700669] gi|298502540|ref|YP_003724480.1| peptide chain release factor RF2 [Streptococcus pneumoniae TCH8431/19A] gi|147756869|gb|EDK63909.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70] gi|147765100|gb|EDK72029.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75] gi|220674011|emb|CAR68524.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC 700669] gi|298238135|gb|ADI69266.1| peptide chain release factor RF2 [Streptococcus pneumoniae TCH8431/19A] gi|301793914|emb|CBW36310.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104] gi|327390112|gb|EGE88455.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375] gi|332076034|gb|EGI86500.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301] gi|332202619|gb|EGJ16688.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317] gi|332204764|gb|EGJ18829.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901] Length = 325 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 207/325 (63%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 AQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|227486869|ref|ZP_03917185.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541969|ref|ZP_03972018.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092943|gb|EEI28255.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182412|gb|EEI63384.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51866] Length = 366 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 155/352 (44%), Positives = 219/352 (62%), Gaps = 3/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L + + D D +R L DP LW + A+ + + H + + ++ + Sbjct: 12 LSDTLTTIEKVLDLDALAERARELELTAADPTLWDDPTNAQKVTSDLSHTQSTLKKVRAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ ELA EE + + + D ++ +E + +++LSGE D DA + + Sbjct: 72 RQRVDDLPVMYELAEEEGEGT--ELADDERADLRQAIESMEVQTMLSGEYDERDAVVTIR 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK K + + EEAGIKSAT + P YG L Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKEGHKVQVFDTSYAEEAGIKSATFQVSDPYMYGTLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ +RR TSF+ + V PVV+ + I+I +SD R+D YR+SG GGQ Sbjct: 190 VEQGTHRLVRISPFDNQARRQTSFAEVEVLPVVEKTDHIDIPDSDVRVDVYRSSGPGGQS 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ +N+A A +L+++L E + + E+ + Sbjct: 250 VNTTDSAVRITHIPTGIVVTCQNEKSQIQNRASAMAVLQSRLLERKR-QEEQAEMDALGA 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F++A + + Sbjct: 309 GGEASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLEAGIRWR 360 >gi|326330854|ref|ZP_08197155.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1] gi|325951384|gb|EGD43423.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1] Length = 372 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 154/354 (43%), Positives = 218/354 (61%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + +G + D D + ++ L + P LW + A + L ++ E Sbjct: 12 QLQATMQTIGQVLDLDAMRKEIADLGEQVAAPDLWDDQDNATRVTGRLSLLQGELNKFTE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D +++E+A EE D L E+ L R+K VE + +LLSGE DS +A + + Sbjct: 72 LSSRIEDLELMVEMAQEEGDADTLAESEAELGRVKKAVESLEIRTLLSGEYDSREALVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A ML+RMY RWAE+ K+ E + EEAG+KSAT I P AYG L Sbjct: 132 RSGAGGVDAADFAEMLMRMYVRWAERNKYPVEVFDTSYAEEAGLKSATFAIHAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V PV++ + EIEI E+D ++D YR+SG GGQ Sbjct: 192 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIKVDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A +L+AKL L+ + E + Sbjct: 252 SVNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKAAAMIVLKAKLLALKKAEEEAQLKELKG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+R+YVL PYQ+VKDLRT E +P V DGD+D F++A + ++ Sbjct: 312 DV-AASWGDQMRNYVLNPYQIVKDLRTTYEVGNPQAVFDGDIDGFLEAGIRWRR 364 >gi|15902709|ref|NP_358259.1| peptide chain release factor 2 [Streptococcus pneumoniae R6] gi|116516272|ref|YP_816152.1| peptide chain release factor 2 [Streptococcus pneumoniae D39] gi|182683675|ref|YP_001835422.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14] gi|303255830|ref|ZP_07341871.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455] gi|15458252|gb|AAK99469.1| Peptide chain release factor 2 [Streptococcus pneumoniae R6] gi|116076848|gb|ABJ54568.1| peptide chain release factor 2 [Streptococcus pneumoniae D39] gi|182629009|gb|ACB89957.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14] gi|302597214|gb|EFL64319.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455] Length = 329 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 153/329 (46%), Positives = 211/329 (64%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ + +E L N + ++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|331090528|ref|ZP_08339381.1| peptide chain release factor 2 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405871|gb|EGG85399.1| peptide chain release factor 2 [Lachnospiraceae bacterium 2_1_46FAA] Length = 337 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 155/331 (46%), Positives = 226/331 (68%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L K E+P W++ ++ +MRE + L + + + + D +L+E+ E++D S Sbjct: 2 EELQKKIEEPGFWEDTETSQKIMRELKGLQSFLENAESLLTSYEDIAMLIEMVYEDNDES 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 ++ E +++ + E + +LLSG D ++A + +HAGAGGTES DWA+ML RMY+R Sbjct: 62 MVGEIRREIRQFEKNFEEIRINTLLSGPYDKDNAIVTLHAGAGGTESCDWASMLYRMYSR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE++ F L+ DG+ GIK+ T + G NAYG+L+ E+GVHRLVRISP++S +R Sbjct: 122 WAERKGFSISVLDYLDGDITGIKTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSAGKRQ 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S V P ++D I+IEI+E D ++DTYRASGAGGQHVN T SA+RITH+PTG+VVQC Sbjct: 182 TSFASCDVIPDIEDEIDIEINEDDLKVDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q ERSQH N+ +A ML+AKLY ++ Q++ + + EIG+G QIRSYV+QPY +V Sbjct: 242 QNERSQHSNREKAMQMLKAKLYLIKQQEQADKVSDIRGEVKEIGFGNQIRSYVMQPYTLV 301 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KD RTN+E + + VLDGD++ F+ A L + Sbjct: 302 KDHRTNVENGNVTAVLDGDIEPFINAYLKKR 332 >gi|307689287|ref|ZP_07631733.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] Length = 329 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 154/322 (47%), Positives = 217/322 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W N+ A+ + + + + I Q + D +L+E+A+EE+D S++ E Sbjct: 1 MQESGFWDNLERAQSVTARAKGIKDRIDLYNNFQSSVEDIKVLIEMAIEENDSSLVTEVY 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + VE + E +LSGE D+N+A + +H+G GGT++ DW MLLRMYTRW EK+ Sbjct: 61 NEISTLSDSVENLRLELMLSGEYDTNNAIVTLHSGVGGTDAMDWTEMLLRMYTRWCEKKA 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L++ G+EAGIKSATL + G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 121 FNVETLDLQVGDEAGIKSATLKVTGLYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +EI+ SD ++DTYRASGAGGQHVN T+SA+RITHIPTG+VVQCQ ERSQ Sbjct: 181 EVTPELRQDQNVEINPSDLKVDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 241 IQNRETALNMLKSKLVELKERAHKEKIEDLTGDLKDMGWGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 I+ V+DG+LD F+K L Sbjct: 301 IQVNDVYKVMDGELDVFIKGYL 322 >gi|260663162|ref|ZP_05864054.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN] gi|260552354|gb|EEX25405.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN] Length = 332 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 161/324 (49%), Positives = 207/324 (63%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ + L +QD++ + + E+ E D + E Sbjct: 1 MTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAEMLQAEPDPELKAELD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +N ++ + + E LL G D +DA LE+H GAGGTE+QDW MLLRMY RWA + Sbjct: 61 NNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYMRWANQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E GEEAGIKS TLLIKG NAYG+L E+GVHRLVRISP+DS +RRHTSF+S+ Sbjct: 121 FAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P++D+SIE+EI SD R+DT+RASGAGGQH+N T+SAVRITH+PTG+V Q ERSQ Sbjct: 181 DVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYTLVKDARTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E V+DGDLD F+ A L Sbjct: 301 YETHDVIGVMDGDLDPFINAYLQW 324 >gi|19552028|ref|NP_600030.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC 13032] gi|62389691|ref|YP_225093.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC 13032] gi|145294961|ref|YP_001137782.1| peptide chain release factor 2 [Corynebacterium glutamicum R] gi|24638152|sp|Q8NS78|RF2_CORGL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|166223627|sp|A4QCD3|RF2_CORGB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|21323567|dbj|BAB98194.1| Protein chain release factor B [Corynebacterium glutamicum ATCC 13032] gi|41325026|emb|CAF19507.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Corynebacterium glutamicum ATCC 13032] gi|140844881|dbj|BAF53880.1| hypothetical protein [Corynebacterium glutamicum R] Length = 368 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 158/354 (44%), Positives = 221/354 (62%), Gaps = 5/354 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + R+ L + DP LW + A+ + E H+ + I + Sbjct: 11 ELDSTLTTIEKVLNPQEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITD 70 Query: 62 IQDRLCDNLILLELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ R+ D I++ELA EED D SI +E L ++ ++ + +++LSGE D+ +A + Sbjct: 71 LRQRIEDLPIMVELAEEEDGDTSIAEE---ELADLRSLIDALEVKTMLSGEYDAREAVIN 127 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG Sbjct: 128 IRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQ 187 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ RR TSF+ + V PVV+ I+I ++D R+D YR+SG GG Sbjct: 188 LSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKVDSIDIPDADVRVDVYRSSGPGG 247 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E Sbjct: 248 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEERAEMDAL 306 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D ++A + + Sbjct: 307 GAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGIRWR 360 >gi|147669189|ref|YP_001214007.1| peptide chain release factor 2 [Dehalococcoides sp. BAV1] gi|146270137|gb|ABQ17129.1| bacterial peptide chain release factor 2 (bRF-2) [Dehalococcoides sp. BAV1] Length = 356 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 148/339 (43%), Positives = 209/339 (61%), Gaps = 2/339 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD ++ L T + +P WQ+ A+ M++ + ++ R+ D L Sbjct: 14 FDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELA 73 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 L+ E D S+ E + + E++ + SG+ D+ +A L VHAGAGG ESQDW Sbjct: 74 VLSRE--DPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDW 131 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRM+ RWAEK+ F E L+ GEEAGIKSATL I+G AYG+LK E GVHRL+R+ Sbjct: 132 AGMLLRMFMRWAEKKGFGMEILDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRL 191 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D++ RHTSF+ + + P +DS++I+I D +ID +R+SG GGQ+V +AVR+T Sbjct: 192 SPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVT 251 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR E + + WG QIR Sbjct: 252 HIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIR 311 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 312 SYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLR 350 >gi|291542843|emb|CBL15953.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus bromii L2-63] Length = 372 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 161/350 (46%), Positives = 224/350 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L + + L K +P W +V +++ +++ L + + + Sbjct: 14 LKPEIDDLSDALGMKGMLSEIQQLELKATEPGFWDDVEKSQKVLQRTGSLKGKVEAYEGL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+ELA EE+D S+L+E ++ +K +E ++ ++LL+GE D N+A L H Sbjct: 74 VAKYEDTHALIELANEEEDESLLEEAESEVEAVKENLEKQRLQTLLTGEYDKNNAILTFH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA ML RMYTRWAE FK + ++ DG+EAG+KSA LL++G NAYG+LK Sbjct: 134 AGSGGTEAQDWAEMLYRMYTRWAEAHGFKVKEVDYLDGDEAGLKSAVLLVEGENAYGYLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SP+DS RRHTSFSS+ V P + E+ I D ++D YRASGAGGQ Sbjct: 194 SEAGVHRLVRVSPFDSAGRRHTSFSSLEVMPEIAKDTEVHIPPEDIKMDVYRASGAGGQK 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVR+THIPTG+VV Q ERSQ++N+ A NML +KL E++ ++ E + Sbjct: 254 VNKTSSAVRLTHIPTGIVVASQVERSQYQNRDVAMNMLISKLVEIKEREHLEKIEDIKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + EI WG QIRSYV PY MVKD RT E + V+DGDLD F+ A L Sbjct: 314 QKEITWGSQIRSYVFMPYTMVKDHRTGFETGNIQAVMDGDLDGFINAYLK 363 >gi|322374638|ref|ZP_08049152.1| peptide chain release factor 2 [Streptococcus sp. C300] gi|321280138|gb|EFX57177.1| peptide chain release factor 2 [Streptococcus sp. C300] Length = 329 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 153/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + K +P W + I A+ +E L N + +++++ + ILL+ E D S+ Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVH 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 DELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ Sbjct: 179 FTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+ KLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAMKMLQTKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 299 HRTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|187777237|ref|ZP_02993710.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC 15579] gi|187774165|gb|EDU37967.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC 15579] Length = 325 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 151/323 (46%), Positives = 219/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + +S +++ + D + L ++ EEDD + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLSKYNHLKNTIEDIIGLSQMLSEEDD-DMGKEIL 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E++ + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEEIDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L+++L EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSRLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDAVMNGDINIFIIEYLK 322 >gi|297171663|gb|ADI22657.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF0500_22O06] Length = 356 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 181/345 (52%), Positives = 236/345 (68%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG FD ++ +RL L+ + P W + +AK + E L + + R+ Sbjct: 4 KSLGGTFDLESRQERLRVLDQEMVQPGFWDSPDQAKATIDESNRLKGWVDPWSSLDARVS 63 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + L+EL EE+D + E + L ++ ++E + ++L G D DA + +H GAGG Sbjct: 64 ELTALVELLEEEEDADLEAEFTRGLASVEKDLEVLEVRTMLQGGDDHRDALVTIHPGAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ESQDWA ML+RMYTRW+E+R F E L++ EE GIKSATL IKG AYG+LK E GV Sbjct: 124 LESQDWAGMLMRMYTRWSERRGFGVEVLDLQSAEEGGIKSATLEIKGECAYGYLKAEGGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D SRRHTSF+S+++YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TD Sbjct: 184 HRLVRISPFDQQSRRHTSFASVFIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTD 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH PTG+V CQQERSQHKN++ A MLRA LY+ LQ++E + E++KTEIG Sbjct: 244 SAVRITHEPTGIVTTCQQERSQHKNRSTAMKMLRAALYQHALQEQERERAVLEATKTEIG 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G QIRSYV QPY MV D RT ++ T+ V+DGDLD F++A L Sbjct: 304 FGNQIRSYVFQPYTMVNDHRTELKITNVQGVMDGDLDPFIEAYLK 348 >gi|171741050|ref|ZP_02916857.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC 27678] gi|283455565|ref|YP_003360129.1| peptide chain release factor 2 [Bifidobacterium dentium Bd1] gi|171276664|gb|EDT44325.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC 27678] gi|283102199|gb|ADB09305.1| prfB Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium dentium Bd1] Length = 380 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 211/353 (59%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L + +P LW + A+ + + + + + + Sbjct: 16 EARAKYESISKALDVDRLTAQAKELEVQAAEPGLWDDPENAQKITSKLSAVQSQLKRLSS 75 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE+D L+E + ++ I+ +++ + ++LL GE D A + + Sbjct: 76 ASQRIDDVETLVELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTI 135 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + Sbjct: 136 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 195 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ Sbjct: 196 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 255 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 256 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 315 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 367 >gi|251782076|ref|YP_002996378.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390705|dbj|BAH81164.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 331 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 148/329 (44%), Positives = 210/329 (63%), Gaps = 2/329 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + + +P W + I A+ + ++ L + +Q+ + + LE+ E+D S+ Sbjct: 1 MEHQMTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEML--EEDDSVK 58 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + +L+ + + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ Sbjct: 59 DDLEASLETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFG 118 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTS Sbjct: 119 NAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 178 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV Sbjct: 179 FVSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTV 238 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +R+Q+ N+ +A ML+AKLY+LE +K+ N + K EI WG QIRSYV PY MVKD Sbjct: 239 DRTQYGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKD 298 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RTN E V+DGD++ F+ A L + Sbjct: 299 HRTNYEVAQVDKVMDGDIEGFIDAYLKWR 327 >gi|94969367|ref|YP_591415.1| peptide chain release factor 2 [Candidatus Koribacter versatilis Ellin345] gi|94551417|gb|ABF41341.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Koribacter versatilis Ellin345] Length = 343 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 167/332 (50%), Positives = 228/332 (68%), Gaps = 2/332 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + + DP+LW N ++ +MRER+ L++A++ K++ R D +LA E +D Sbjct: 2 AEVEKEAADPNLWGNPENSQRVMRERKRLEDALATDKDLSRRTDDITAYFDLAKEGED-- 59 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 I + + +++ VE + E+LLSG++D A + +H GAGGTESQDWA MLLRMY R Sbjct: 60 ITADLRREMDQLRDIVEKLETETLLSGDSDRLSAIVTIHPGAGGTESQDWAEMLLRMYLR 119 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE++ F+T + GEEAG+KS T+ + G +AYG L E GVHRLVRISP+D RRH Sbjct: 120 WAERQGFETTVNDYQPGEEAGLKSVTITVAGQDAYGLLTSEIGVHRLVRISPFDQAKRRH 179 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S++V P +D+SIE+ + D R DTYR+ G GGQHVNTTDSAVRITH PTG+VV C Sbjct: 180 TSFASVFVSPEIDESIEVIVKPDDIRTDTYRSGGKGGQHVNTTDSAVRITHFPTGIVVSC 239 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q ERSQHKN+ +A +LR+K+YE EL+K+ + E SK +I +G QIRSYVL PY+MV Sbjct: 240 QNERSQHKNRERAMKILRSKIYEYELEKKRAASQKVEDSKLDIDFGSQIRSYVLHPYRMV 299 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 KD RT E P VLDGDL F++A L +++ Sbjct: 300 KDHRTKFEVGDPDRVLDGDLKGFIRAYLLMRR 331 >gi|147834602|emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera] Length = 426 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 232/352 (65%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++ + W V RL L+ + P LW N + A + RE L + +K + Sbjct: 64 IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 123 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EE+D + E+ L ++ + K+ E+LL+G+ DS Y+EV Sbjct: 124 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 183 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M+++MY WA++R + ++ GE AGIK AT+ + G ++G+ K Sbjct: 184 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 243 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P++ D S ++I+ESD RI+ +RA GAGGQ Sbjct: 244 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 303 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRI HIPTGV CQ ERSQH+NKA A +L+++L +LE+ ++ +I Sbjct: 304 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 363 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S T+I WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 364 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 415 >gi|78776561|ref|YP_392876.1| peptide chain release factor 2 [Sulfurimonas denitrificans DSM 1251] gi|123550812|sp|Q30TP0|RF2_SULDN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|78497101|gb|ABB43641.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas denitrificans DSM 1251] Length = 365 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 239/350 (68%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 LS++++ + G+ + D +R++ ++ W + A ++ +++ + + Sbjct: 12 NLSKKMSNITGVVEPDKLYKRVAQIDELENSQDFWNDSSNAALVQKDKTQCERKLKKYNL 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L E+A EE+D ++ E + Q I+ + + E LLS E D N+A L + Sbjct: 72 AKNAIDDAKELYEMAKEENDEDLIAECFNGAQHIEDLIRTMEIEVLLSEETDGNNAILSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA++LLRMY R+AE+R + E L+ G+EAGIK +LLI G NAYG+L Sbjct: 132 HPGAGGTESQDWASILLRMYKRFAERRGWSVEVLDYQAGDEAGIKDVSLLISGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DSN++RHTSFSS+ V P VDD I I I + D R+DTYR+SGAGGQ Sbjct: 192 KVENGIHRLVRISPFDSNAKRHTSFSSVMVSPEVDDDINIVIEDRDIRVDTYRSSGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHI TGVVVQCQ +RSQHKN+A A ML+++LYELEL + A I Sbjct: 252 HVNKTESAIRITHIATGVVVQCQNDRSQHKNRATAMKMLKSRLYELEL--ENQKAEIAGI 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K+EIGWG QIRSYV+QPYQ +KD R+NI ++ S +LDGD+D ++ L Sbjct: 310 AKSEIGWGHQIRSYVMQPYQQIKDTRSNIAYSNVSAILDGDIDKMIEDVL 359 >gi|88809865|ref|ZP_01125371.1| peptide chain release factor 2 [Synechococcus sp. WH 7805] gi|88786249|gb|EAR17410.1| peptide chain release factor 2 [Synechococcus sp. WH 7805] Length = 356 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 148/342 (43%), Positives = 207/342 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + ++ Q + D Sbjct: 3 RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLETWQGAVSDAQ 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E L +++ +++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYDLEPDEDMLGEAQGGLNQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE R K E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++I+I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YV PYQMVKDLRT E V+DGDL+ F++A L Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQGVMDGDLEPFIQALLR 344 >gi|307708908|ref|ZP_07645368.1| peptide chain release factor 2 [Streptococcus mitis SK564] gi|307620244|gb|EFN99360.1| peptide chain release factor 2 [Streptococcus mitis SK564] Length = 325 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ E D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVQEELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 AQLAELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|195977853|ref|YP_002123097.1| peptide chain release factor 2 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225870173|ref|YP_002746120.1| peptide chain release factor 2 [Streptococcus equi subsp. equi 4047] gi|195974558|gb|ACG62084.1| peptide chain release factor 2 PrfB [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225699577|emb|CAW93198.1| peptide chain release factor 2 [Streptococcus equi subsp. equi 4047] Length = 338 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 152/336 (45%), Positives = 216/336 (64%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + + A+ +E L ++Q+ + + LE+ Sbjct: 1 MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHDMQELSDETELYLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D S+ +E +L ++ + + LLS D ++A LE+H G+GGTE+QDWA+ML Sbjct: 59 DEDDSVKEELEASLIKLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLF 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ + FK E L+ G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|312796706|ref|YP_004029628.1| peptide Chain Release Factor 2 (RF-2) [Burkholderia rhizoxinica HKI 454] gi|312168481|emb|CBW75484.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Burkholderia rhizoxinica HKI 454] Length = 320 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 166/317 (52%), Positives = 231/317 (72%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + +A+ L RE++ LD + + + L D L ELA EE D L ++Q + Sbjct: 2 WSDSKQAQALGREKKLLDAVVQMLSALNGDLTDTQELFELASEEQDDDTLLACERDVQAL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + V +F + + AD N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ FK E L Sbjct: 62 ERRVADIEFRRMFNNPADPNNCFVDIQAGAGGTEAQDWASMLLRQYLRYCERKGFKAEVL 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E DGE AGIK+AT+ ++G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP V Sbjct: 122 EQSDGEVAGIKNATIKVEGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D+SI+I+++ +D RIDT+RASGAGGQH+N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+ Sbjct: 182 DESIDIDVNPADLRIDTFRASGAGGQHINKTDSAVRITHLPSGIVVQCQNDRSQHRNRAE 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML+++LYE E++KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ Sbjct: 242 AMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWGHQIRSYVL-DQSRVKDLRTNVEISNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLDDF+ A+L Sbjct: 301 RAVLDGDLDDFISASLK 317 >gi|159036572|ref|YP_001535825.1| peptide chain release factor 2 [Salinispora arenicola CNS-205] gi|189040003|sp|A8M3R1|RF2_SALAI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157915407|gb|ABV96834.1| peptide chain release factor 2 [Salinispora arenicola CNS-205] Length = 373 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 162/354 (45%), Positives = 222/354 (62%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D + L P LW + A+ + + +++ I+ + ++ Sbjct: 13 LDTTLRNIESVLDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSYVNGEITKLTDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +LLELA E D +L E + + + ++ + +LLSGE DS +A + + Sbjct: 73 RSRLDDTQVLLELAEAESDPGVLTEVAAEITGLAKSIDEMEVRTLLSGEYDSREALVAIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E++ R D YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRTDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A +L+A+L LE +++EE A + Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKLQGLK 310 Query: 303 KTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G WG Q+RSYVL PYQMVKDLRT E SPS V DG+LD F++A + +K Sbjct: 311 TDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGSPSSVFDGELDAFIEAGIRWRK 364 >gi|32266159|ref|NP_860191.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449] gi|81666133|sp|Q7VIE6|RF2_HELHP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|32262209|gb|AAP77257.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449] Length = 366 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 171/349 (48%), Positives = 234/349 (67%), Gaps = 3/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + ++L + +D H W + A + ++++ + + Sbjct: 13 LHNKCENIAKILNPTSLQKQLKDIENLEQDEHFWNDSKRAAEVAKQKRKCERMLQTYTNT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L L E+A+ E+D L+ + + ++ + E +LSGE D ++A + + Sbjct: 73 KQEIDDALELYEIAMSEEDSRTLELLFEQAPSLLSHIQKVEIEVMLSGENDGSNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RW+E+R FK E L+ DGEEAGIK +IKG NAYG+ K Sbjct: 133 PGAGGTESQDWASILYRMYLRWSERRGFKVELLDYQDGEEAGIKGVAFIIKGENAYGYAK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ V P +DD I IEI + D RIDTYRASGAGGQH Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELDDDINIEIEDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A ML++KLYELELQK +E A+ Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLKSKLYELELQKNQEGAS---QE 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKDLRT + S VLDGD+D+ +++ L Sbjct: 310 KSEIGWGHQIRSYVLAPYQQVKDLRTQFATSDTSGVLDGDIDEIIESVL 358 >gi|225549713|ref|ZP_03770678.1| peptide chain release factor 2 [Borrelia burgdorferi 118a] gi|225369673|gb|EEG99121.1| peptide chain release factor 2 [Borrelia burgdorferi 118a] Length = 348 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 155/347 (44%), Positives = 222/347 (63%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 3 KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L E+A E D + L+ ++ + + S E D+N+A+L +H+GAGG Sbjct: 63 DLSDLCEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTS 238 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345 >gi|309810763|ref|ZP_07704570.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185] gi|308435300|gb|EFP59125.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185] Length = 370 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 136/354 (38%), Positives = 213/354 (60%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L + + + D + +++ L ++ P LW + A+ + + ++ Sbjct: 11 NLRTTMASVREVLDLEKLKKQIVDLEEQSAAPDLWDDPDAAQKITSALSRANAENDRVEN 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D +L+E+ EE+D L E L++++ V + +LL+GE D +A + + Sbjct: 71 MDAAIDDLEVLVEMGTEENDADTLAEAERELKKLQKAVGELEVRTLLNGEFDEREAVVTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A ML+RMY RWAE+ + T+ ++ EEAG+KS T + P A+G L Sbjct: 131 RAGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSVTFEVNVPYAFGNL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI E++ +ID +R+SG GGQ Sbjct: 191 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIETTDTIEIPENELKIDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG VV Q E+SQ +N+A A +++++L L+ Q+ + Sbjct: 251 SVNTTDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKKQEEDAQKKELAG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E + S V DGD+D F++A + K+ Sbjct: 311 -DIKASWGDQMRSYVLHPYQMVKDLRTEYEVGNTSGVFDGDIDGFIEAGIRWKR 363 >gi|301064303|ref|ZP_07204737.1| peptide chain release factor 2 [delta proteobacterium NaphS2] gi|300441582|gb|EFK05913.1| peptide chain release factor 2 [delta proteobacterium NaphS2] Length = 326 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 158/326 (48%), Positives = 217/326 (66%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 WQ + E L +ER L I +++ + D +L E+ALEE D + L E Sbjct: 1 MSKADFWQRDQEEISRLNQERSALSEQIDTWEDLFRKTEDAALLAEMALEEKDKTTLSEV 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + +++R++ E++ + SLL D +A + ++AGAGGTE+QDW ML RMYTRWAE + Sbjct: 61 TRDVERLEREIKRLELRSLLGKPDDRRNAIVAINAGAGGTEAQDWVEMLFRMYTRWAEAK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 K E ++ G+EAGIK+ + GP AYG+LK E G+HR+VRISP+D+ RRHTSF+S Sbjct: 121 GMKVEVIDFLAGDEAGIKNVDFTVTGPYAYGYLKSEHGIHRMVRISPFDATGRRHTSFAS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD I IE+ E+D RIDTYRASG GGQHVN T SA+RITH+PT +VVQCQ E+S Sbjct: 181 VSVLPEVDLDINIEVDENDLRIDTYRASGPGGQHVNKTSSAIRITHLPTKIVVQCQNEKS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+NK A +L++KLYELE K E+ ++ +I WG QIRSYV PY+MVKD RT Sbjct: 241 QHRNKDMAMKVLKSKLYELEKNKLEQKKQEIHDTQKDIAWGSQIRSYVFNPYRMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N++ + V+DGD+D+F+ A L +K Sbjct: 301 NLDDGNVDKVMDGDIDEFIDAYLRMK 326 >gi|189218067|ref|YP_001938709.1| protein chain release factor B [Methylacidiphilum infernorum V4] gi|189184925|gb|ACD82110.1| Protein chain release factor B [Methylacidiphilum infernorum V4] Length = 337 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 170/326 (52%), Positives = 216/326 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P WQ +A+ + + L S K + +R D L +L E +D S+ +E Sbjct: 1 MASPSFWQTPEKAEKALSRSKELKAKFSDYKTLVNRFKDIEALYDLLQESEDPSLEKELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ + + +LS D +A L VH+GAGGTE+ DWA MLLRMY R+AE+ Sbjct: 61 QEINAYSDLLDSIEVKLVLSDPMDQKNAILSVHSGAGGTEACDWAAMLLRMYQRYAERHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK ++I GEEAGIKSA+LLI G AYG+LK E+GVHRLVRISP+++ +R TSF+S+ Sbjct: 121 FKVSLIDILPGEEAGIKSASLLISGSYAYGYLKAERGVHRLVRISPFNAQGKRQTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V VD+SIEIEI ESD RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 DVVAEVDESIEIEIKESDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVVCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NKA A +LR++LYELE K+ K EIGWGRQIRSYVLQPY+MVKDLRT Sbjct: 241 IQNKATAMKILRSRLYELEKDKKRAEMERIYGQKGEIGWGRQIRSYVLQPYKMVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 + KT +VLDGDLD F+ A L KK Sbjct: 301 VTKTQVEEVLDGDLDSFIWAYLLGKK 326 >gi|33866841|ref|NP_898400.1| peptide chain release factor 2 [Synechococcus sp. WH 8102] gi|81573750|sp|Q7U3W6|RF2_SYNPX RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|33639442|emb|CAE08826.1| peptide chain release factor RF-2 [Synechococcus sp. WH 8102] Length = 374 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 147/351 (41%), Positives = 207/351 (58%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +L D R L P W + A+ MR + + + + Sbjct: 12 ELTDRLGHAQDCLDVPALKARQQDLEQLAAQPDFWDDQQAAQKQMRRLDEVKAQLQQLAD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D LEL E D +L E + L +++ ++ + E LLSG+ D A L + Sbjct: 72 WGGAVDDAKATLELYELEPDEEMLTEAQEGLNQLRQGLDRWELERLLSGDYDKEGAVLTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGT++QDWA MLLRMYTRWAE K E+ +GEEAGIKS T+ ++G AYG+L Sbjct: 132 NAGAGGTDAQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G HRLVRISP+++N +R TSF+ I V P +D+ ++I+I E D + T R+ GAGGQ Sbjct: 192 RNEKGTHRLVRISPFNANDKRQTSFAGIEVMPKIDEEVDIDIPEKDLEVTTSRSGGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R Sbjct: 252 NVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E WG QIR+YV PYQMVKDLRT+ E V+DG LD F+ A+L Sbjct: 312 DIVEAAWGNQIRNYVFHPYQMVKDLRTSEETNDVQAVMDGALDPFIDASLR 362 >gi|307941920|ref|ZP_07657273.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4] gi|307774826|gb|EFO34034.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4] Length = 322 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 223/309 (72%), Positives = 259/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD+ I+ +K ++ L DN+ L+EL E D S++++ D L+ +K +V Q + Sbjct: 1 MRERQQLDDGINGVKGLEQDLADNMELIELGELEGDQSVIKDAEDALRGLKDKVNELQLQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR FK E LE HDGEEAGI Sbjct: 61 SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGFKVELLEYHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGW+K E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEIE++E Sbjct: 121 KSATLLIKGENAYGWMKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIEVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN + KT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDG LD Sbjct: 241 EQELKKREEAANAEAAGKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGALDP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAQR 309 >gi|148985895|ref|ZP_01818989.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71] gi|148989834|ref|ZP_01821128.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73] gi|149007634|ref|ZP_01831251.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74] gi|149020396|ref|ZP_01835288.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72] gi|147760789|gb|EDK67760.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74] gi|147922041|gb|EDK73165.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71] gi|147924776|gb|EDK75860.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73] gi|147930698|gb|EDK81680.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72] gi|301799772|emb|CBW32341.1| peptide chain release factor 2 [Streptococcus pneumoniae OXC141] gi|332077171|gb|EGI87633.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545] gi|332203909|gb|EGJ17976.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368] Length = 325 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 AQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|118590063|ref|ZP_01547467.1| peptide chain release factor 2 [Stappia aggregata IAM 12614] gi|118437560|gb|EAV44197.1| peptide chain release factor 2 [Stappia aggregata IAM 12614] Length = 322 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 225/309 (72%), Positives = 262/309 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD++IS IK ++ L DN+ L+EL EDD S++ + + L+ +K +V Q Sbjct: 1 MRERQQLDDSISGIKSLEQDLSDNIELIELGEMEDDKSVVADAEEALRGLKGKVNQLQLN 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND YLE+++GAGGTESQDWA+MLLRMY RWAEK FK E LE HDGEEAGI Sbjct: 61 SLLSGEADANDTYLEINSGAGGTESQDWASMLLRMYRRWAEKHGFKVEVLEYHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSI+I+I+E Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIDIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE A+ +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDGDLD+ Sbjct: 241 EAELKKREEAASAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAQR 309 >gi|313901293|ref|ZP_07834780.1| peptide chain release factor 2 [Clostridium sp. HGF2] gi|312953901|gb|EFR35582.1| peptide chain release factor 2 [Clostridium sp. HGF2] Length = 349 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 149/348 (42%), Positives = 211/348 (60%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L FD ++ L + T W + A+ L+R+ + + + +++ L Sbjct: 1 MRSLVSHFDLAEKKHKIQELTSMTLQDDFWNDPQHAQTLIRQLNGIKDIVESYEKLNSAL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +L E+ D I + ++ + + + LLS E D + A LE+H GAG Sbjct: 61 IGLEETHDLLKEDYDDEIFELFEAEYLEMEKNFDDFEIKILLSHEYDHSSAILELHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA+ML RMY+RWAEK+ FK L+ G+EAGIKS T L++G AYG+LK E+G Sbjct: 121 GTESCDWADMLYRMYSRWAEKKGFKVSVLDYLPGDEAGIKSVTFLVEGDMAYGYLKAEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS RRHTSF+S+ V P ++ IEIEI D ++T RASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSGGRRHTSFASLDVMPQFNNEIEIEIKPEDLIVETKRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+ H PTG+V CQ RSQH+N+ +A +L+++LY+ ++++E + + Sbjct: 241 DSAVRMVHKPTGLVAICQNGRSQHENREEALRVLKSRLYQKMIEEQEARLAEIKGEQKAN 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L + Sbjct: 301 EWGSQIRSYVFHPYSMVKDHRTSCETSDVQGVMDGDLDAFIFAYLKTQ 348 >gi|254500720|ref|ZP_05112871.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11] gi|222436791|gb|EEE43470.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11] Length = 322 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 222/309 (71%), Positives = 260/309 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD+ I+ +K ++ L DN+ L+EL EDD S++++ + L+ +K +V Q + Sbjct: 1 MRERQQLDDGINGVKGLEQELADNIELIELGEMEDDKSVVEDAEEALRGLKDKVNQLQLD 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR +K E LE HDGEEAGI Sbjct: 61 SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEYHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEI+++E Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIDVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW ML+A+LY Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWGMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT ++ TSP DVLDG LD Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVQSTSPDDVLDGSLDS 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAQR 309 >gi|310778152|ref|YP_003966485.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter polytropus DSM 2926] gi|309747475|gb|ADO82137.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter polytropus DSM 2926] Length = 365 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 161/351 (45%), Positives = 228/351 (64%), Gaps = 1/351 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 ++ + G D + ++ L +T W + E++ L++E L I + I+ Sbjct: 15 EKIEEIRGSLDLEGKENKVKELEKETLKDGFWNDKRESEKLIKEMNALKEIIGEYRSIEK 74 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + +LLE +D L+E + + + + LL GE D+N+A + +H+G Sbjct: 75 LSDEVSVLLEFVEMGED-EFLEELETKHRGLDKVIGAFDVKLLLDGEFDANNAIVTIHSG 133 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+ DWA+ML RMY+RW R +K L+ GE GIKS T+L++G AYG+LK E Sbjct: 134 AGGTEACDWADMLYRMYSRWCNNRGYKITELDFMPGEMVGIKSITILVEGMRAYGYLKNE 193 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +G+HRLVRISP+D+N +RHTSF+S+ V P VD++ +IEI+ D +IDTYRASGAGGQHVN Sbjct: 194 KGIHRLVRISPFDANKKRHTSFASVDVMPEVDETTDIEINTGDLKIDTYRASGAGGQHVN 253 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+P+GVVV CQ+ERSQ +N+ A +LR+KL ELE++KREE + ++ Sbjct: 254 TTDSAVRITHLPSGVVVTCQRERSQLQNRETAMKLLRSKLLELEMKKREEELKKIQGEQS 313 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IGWG QIRSYV QPY +VKD RT +E + V+DGD+DDF+ L K Sbjct: 314 DIGWGSQIRSYVFQPYTLVKDHRTLVESGNIKAVMDGDIDDFINGHLRWLK 364 >gi|302544934|ref|ZP_07297276.1| peptide chain release factor 2 [Streptomyces hygroscopicus ATCC 53653] gi|302462552|gb|EFL25645.1| peptide chain release factor 2 [Streptomyces himastatinicus ATCC 53653] Length = 370 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + +L + +E+ Sbjct: 13 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D E L ++ V+ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAADEGDEDARAEAEAELNAVRKAVDEMEVRTLLSGEYDAREAVVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEIYETSYAEEAGIKSTTFAVQIPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ RID YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRIDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +N+A A N+L+AKL + Q+ + + + Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLDRRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG+LD F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 364 >gi|329116145|ref|ZP_08244862.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020] gi|326906550|gb|EGE53464.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020] Length = 327 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 211/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L ++Q+ + + LE+ ++D S+ +E Sbjct: 1 MSEPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEML--DEDDSLQEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 59 ASLEKLDQILSSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ E N + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG +D F+ A L + Sbjct: 299 FEVAQVDKVMDGFIDGFIDAYLKWR 323 >gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM 20162] gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM 20162] Length = 371 Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 157/355 (44%), Positives = 218/355 (61%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D +R+ L K DP LW + A+ + + H + + + ++ Sbjct: 12 LETTLQTVEKVIDLDELRRRVDELEHKASDPELWNDQANAQQVTSQLSHAQSELRRVTDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNL---QRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA E+ + D +++ E+E + +++LSGE D+ DA + Sbjct: 72 RQRLDDLPVLYELAEAEEGDDLAAALEDADADRAKLRGEIEAMEVKTMLSGEYDARDALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + AGAGG ++ DWA ML+RMY RWAEK + E + EEAG+KSAT IK AYG Sbjct: 132 NIRAGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGLKSATFAIKTDYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L E G HRLVRISP+D+ RR TSF+ + V PVV+ + I++ E++ R+D YR+SG G Sbjct: 192 TLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVDENEVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E + + E Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLLERKR-QEERAQMDA 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E +PS VLDGDLD F++A + + Sbjct: 311 LKTTEGASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLDGDLDGFIEAGIRWR 365 >gi|163852399|ref|YP_001640442.1| peptide chain release factor 2 [Methylobacterium extorquens PA1] gi|218531158|ref|YP_002421974.1| peptide chain release factor 2 [Methylobacterium chloromethanicum CM4] gi|240139734|ref|YP_002964211.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1] gi|254562146|ref|YP_003069241.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4] gi|163664004|gb|ABY31371.1| peptide chain release factor 2 [Methylobacterium extorquens PA1] gi|218523461|gb|ACK84046.1| peptide chain release factor 2 [Methylobacterium chloromethanicum CM4] gi|240009708|gb|ACS40934.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1] gi|254269424|emb|CAX25390.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4] Length = 321 Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 220/309 (71%), Positives = 253/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD A++ IK+++ L D L+EL E D + + E ++ ++ E +Q E Sbjct: 1 MRERQELDEAVTAIKKLERDLEDGATLIELGEMEGDQASISEGEATIKAVEKEAASRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI Sbjct: 61 TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD IEIEI E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRIEIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T P +VLDGDLD Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300 Query: 346 FMKATLAIK 354 FM+A+LA + Sbjct: 301 FMEASLAQR 309 >gi|78213950|ref|YP_382729.1| peptide chain release factor 2 [Synechococcus sp. CC9605] gi|78198409|gb|ABB36174.1| peptide chain release factor 2 [Synechococcus sp. CC9605] Length = 356 Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 150/342 (43%), Positives = 206/342 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + +S + + + D Sbjct: 3 RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLGGWRGAVDDAQ 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +LQE + L +++ ++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYELEPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YV QPYQMVKDLRTN E V+DG LD F+ A+L Sbjct: 303 QIRNYVFQPYQMVKDLRTNEETNDVQAVMDGALDPFIDASLR 344 >gi|254429259|ref|ZP_05042966.1| peptide chain release factor 2 [Alcanivorax sp. DG881] gi|196195428|gb|EDX90387.1| peptide chain release factor 2 [Alcanivorax sp. DG881] Length = 356 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 233/353 (66%), Gaps = 8/353 (2%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG+FD+D +RL+ + + E+P +W + A+ L +ER L+ ++ I + + Sbjct: 3 KRLGGIFDYDQKSERLTEVERELENPDVWNDPDYARALGKERAQLEMVVNTINDASQGVE 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D LL+L +EE D L E +L+ ++ V +F + SG+ D+ AYL++ AG+GG Sbjct: 63 DTSALLDLVVEEGDEDTLTEVESDLRDLEKMVADLEFRRMFSGQMDACSAYLDIQAGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDW M+LRMY RW E FKTE +E G+ AGIKSAT+ +G AYGWL+ E GV Sbjct: 123 TEAQDWGEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATIRFEGEYAYGWLRTETGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS RRHTSFSS++V P VDD I+++I R+DTYRASGAGGQHVN TD Sbjct: 183 HRLVRKSPFDSGGRRHTSFSSVFVSPEVDDDIDVDIDVGSMRVDTYRASGAGGQHVNRTD 242 Query: 248 SAVRITHIPT-------GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 SAVR+T+ T +V QCQ RSQH+NK QA M++AK+YE+E+Q+R + E Sbjct: 243 SAVRLTYEYTDEGGEKHTLVTQCQSGRSQHQNKDQALKMMQAKVYEVEMQRRNAEKQVQE 302 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S+K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 303 SNKSDIGWGSQIRSYVLDD-GRIKDLRTGVESHNTQQVLDGALDQFIEASLKA 354 >gi|315606122|ref|ZP_07881153.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180 str. F0310] gi|315312404|gb|EFU60490.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180 str. F0310] Length = 372 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 143/355 (40%), Positives = 222/355 (62%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + D ++++ LN K P LW + A+ + H + + I ++ Sbjct: 12 LRTTMDNIVAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQEVTSALSHRQSELDRITQM 71 Query: 63 QDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +R+ D ++E+A E+ D IL E +L++++ ++ + +LL GE D +A + Sbjct: 72 SERIDDLEAMVEMAAEDPDEGAEILAEAEGDLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ D+A +LLRMY RWAE+ + T+ ++ EEAG+KSAT ++ P AYG Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GG Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L + E+ Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVL-RHEEEQAKKKEL 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 311 AGDVKASWGDQMRSYVLQPYQMVKDLRTEFESGNPQSVFDGDIDGFINAGIRWRK 365 >gi|78356848|ref|YP_388297.1| peptide chain release factor 2 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219253|gb|ABB38602.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 358 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 170/354 (48%), Positives = 228/354 (64%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M S L GG FD + RL + + P W + ++RE+ L+N+++ + Sbjct: 1 MPFSSSLKRSGGAFDHAQSKYRLEEIEKQLSSPDAWNAPEKLTPVLREKSQLENSVARLD 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ D LELA EE+ +L++ + ++ +E + LLS E D + A LE Sbjct: 61 ALRQAKDDMQGWLELAEEENTQEVLEQLEEQAGILEALLEETEVGLLLSAEEDKHAAILE 120 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTE+QDWA MLLRMY RWAE +FK E L+ DG+EAGIKS TL I G NAYG Sbjct: 121 IHPGAGGTEAQDWAEMLLRMYVRWAESHEFKAEYLDYLDGDEAGIKSVTLKIDGTNAYGL 180 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE+G+HRL+RISPYD++ RRHTSF+S+ V P + I I+I +SD RID +R+SG GG Sbjct: 181 LKGEKGIHRLIRISPYDASGRRHTSFASVDVIPDAGEEITIDIKDSDLRIDIFRSSGPGG 240 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTT SAVR+THIPTG+ QCQ E+SQH NK A +LRA+LYE E+++R+ Sbjct: 241 QSVNTTSSAVRVTHIPTGITAQCQNEKSQHHNKETAMQILRARLYEAEIRRRDAEKQADY 300 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +SK IGWG QIR+Y LQPY++VKD R+N E VLDG+LD M+ L + Sbjct: 301 ASKEAIGWGSQIRTYTLQPYRLVKDHRSNFEVGDVEAVLDGELDALMRNHLLYQ 354 >gi|289168241|ref|YP_003446510.1| peptide chain release factor 2 [Streptococcus mitis B6] gi|288907808|emb|CBJ22648.1| peptide chain release factor 2 [Streptococcus mitis B6] Length = 325 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ E D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHEELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 TQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|19745741|ref|NP_606877.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS8232] gi|50913897|ref|YP_059869.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10394] gi|71903175|ref|YP_279978.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS6180] gi|94988152|ref|YP_596253.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS9429] gi|94990034|ref|YP_598134.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10270] gi|94992039|ref|YP_600138.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS2096] gi|94993945|ref|YP_602043.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10750] gi|306827732|ref|ZP_07461004.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC 10782] gi|19747880|gb|AAL97376.1| putative peptide chain release factor 2 [Streptococcus pyogenes MGAS8232] gi|50902971|gb|AAT86686.1| Bacterial Peptide Chain Release Factor 2 [Streptococcus pyogenes MGAS10394] gi|71802270|gb|AAX71623.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes MGAS6180] gi|94541660|gb|ABF31709.1| bacterial peptide chain release factor 2 (RF-2) [Streptococcus pyogenes MGAS9429] gi|94543542|gb|ABF33590.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus pyogenes MGAS10270] gi|94545547|gb|ABF35594.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus pyogenes MGAS2096] gi|94547453|gb|ABF37499.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus pyogenes MGAS10750] gi|304430050|gb|EFM33087.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC 10782] Length = 337 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 149/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L +P W + I A+ +E L +Q+ + +LLE+ Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D S+ +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LL Sbjct: 59 DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334 >gi|226305794|ref|YP_002765754.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4] gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121] gi|259585230|sp|C0ZXD0|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4] gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121] Length = 368 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 153/352 (43%), Positives = 215/352 (61%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + D + +R+ L + DP LW + A+ + + H + I + Sbjct: 12 LDTTLRTCESVVDVEELRRRIDELEHQAADPGLWNDQEHAQQVTSQLSHAQAELRRIVAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++RL + IL ELA +E + + ++ ++ + +++LSGE D DA + + Sbjct: 72 RERLDEMPILYELAEDEG-PDAVADADAERASLRDDIAAMEVKTMLSGEYDERDALINIR 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK + E + EEAG+KSAT IKGP YG L Sbjct: 131 SGAGGIDAADWAEMLMRMYIRWAEKHDYGVEVYDTSYAEEAGLKSATFAIKGPYTYGTLS 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ + IEI+E+D R+D YR+SG GGQ Sbjct: 191 VEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEINENDIRVDVYRSSGPGGQS 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL ++ Q+ + + Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLAVKRQEERAEMDALKGD 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + + Sbjct: 311 SGS-SWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLEAGIRWR 361 >gi|269795803|ref|YP_003315258.1| peptide chain release factor 2 [Sanguibacter keddieii DSM 10542] gi|269097988|gb|ACZ22424.1| bacterial peptide chain release factor 2 (bRF-2) [Sanguibacter keddieii DSM 10542] Length = 372 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 145/356 (40%), Positives = 222/356 (62%), Gaps = 4/356 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R++ L+ + P LW + A+ + + I + Sbjct: 13 LRGTLATISAVTDPEALKIRIAELSDQASAPDLWDDTDAAQKVTTALSQAQTELDRIVNM 72 Query: 63 QDRLCDNLILLELALE---EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + R+ D +L+E+A E DD L+E +L I+ ++ + +LLSGE D+ +A + Sbjct: 73 ESRIDDLEVLVEMATEGDGADDVETLEEAQKDLDGIRRDLGDLEVRTLLSGEWDAREAVV 132 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + AGAGG ++ D+A ML+RMY RWAE+ + T L+ EEAG+KSAT +K P A+G Sbjct: 133 SIRAGAGGVDAADFAEMLMRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFG 192 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L E G HRLVRISP+D+ RR TSF+++ V P+++ + ++I +++ R+D +R+SG G Sbjct: 193 NLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHVDIPDNEIRVDVFRSSGPG 252 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L LE Q +E+ Sbjct: 253 GQSVNTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLL-LERQAQEKAMKKE 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVLQPYQMVKDLRT E + S V DG++DDF++A + ++ Sbjct: 312 MAGDVKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTSAVFDGEIDDFIEAGIRWRR 367 >gi|322388283|ref|ZP_08061887.1| peptide chain release factor RF2 [Streptococcus infantis ATCC 700779] gi|321140955|gb|EFX36456.1| peptide chain release factor RF2 [Streptococcus infantis ATCC 700779] Length = 325 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 207/325 (63%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++ + + ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMDELQDEVEILLDFLAE--DESVKDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EKLSELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|323126937|gb|ADX24234.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 327 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ + ++ L + +Q+ + + LE+ E+D S+ + Sbjct: 1 MTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEML--EEDDSVKDDLE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+ + + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 59 ASLETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ N + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD++ F+ A L + Sbjct: 299 YEVAQVDKVMDGDIEGFIDAYLKWR 323 >gi|291326803|ref|ZP_06125920.2| peptide chain release factor 2 [Providencia rettgeri DSM 1131] gi|291312658|gb|EFE53111.1| peptide chain release factor 2 [Providencia rettgeri DSM 1131] Length = 320 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 176/318 (55%), Positives = 224/318 (70%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ + I ++ L D LLELA+E DD E L+++ Sbjct: 2 WNEPERAQALGKERSSLEAIVETIDQMTQGLEDVEGLLELAVEADDEDTFNEAEAELEQL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++E +F + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE + Sbjct: 62 EGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEII 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP V Sbjct: 122 EESDGDVAGLKSATVKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK Q Sbjct: 182 DDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A L+AKLYELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLKA 318 >gi|239941657|ref|ZP_04693594.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 15998] gi|239988119|ref|ZP_04708783.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 11379] Length = 352 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 153/349 (43%), Positives = 213/349 (61%), Gaps = 1/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW + A+ + + HL + + ++ R+ Sbjct: 1 MGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEALRGRI 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L ELA E D E L+ +K ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + N + Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGDGGN- 299 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 348 >gi|257054828|ref|YP_003132660.1| peptide chain release factor 2 [Saccharomonospora viridis DSM 43017] gi|256584700|gb|ACU95833.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharomonospora viridis DSM 43017] Length = 368 Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 160/353 (45%), Positives = 223/353 (63%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L + + D D + ++ L + P LW + A+ + + H ++ + E+ Sbjct: 12 LGGKLAQVEAVMDLDALRREVAELEEEAARPDLWNDPEVAQRVTSQLSHKQASLRKVSEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E D + L E L ++ +V + +LLSGE D +A + + Sbjct: 72 RQRVDDLGVLHELAEAEGDKASLAEAEAELAQLTKDVNALEVRTLLSGEYDERNAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ DWA MLLRMY RWAE+ + TE +I EEAGI+SAT I GP YG L Sbjct: 132 SEAGGVDAADWAEMLLRMYLRWAERHNYPTEIYDISYAEEAGIRSATFKISGPYLYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ +RR TSF+ + V P V++ +EI E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQNRRQTSFAHVEVLPEVEEIDHVEIPEKDIRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A +L+AKL L+ +K EE A + Sbjct: 252 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKASAMKVLQAKL--LQRKKEEERAELDALR 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQ+VKDLRT+ E +PS VLDG+LD F++A + +K Sbjct: 310 DSGSSWGNQMRSYVLHPYQLVKDLRTDYEVGNPSAVLDGELDGFLEAGIRWRK 362 >gi|307706955|ref|ZP_07643754.1| peptide chain release factor 2 [Streptococcus mitis SK321] gi|307617669|gb|EFN96837.1| peptide chain release factor 2 [Streptococcus mitis SK321] Length = 325 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ E D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHEELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|331266735|ref|YP_004326365.1| peptide chain release factor 2 [Streptococcus oralis Uo5] gi|326683407|emb|CBZ01025.1| peptide chain release factor 2 [Streptococcus oralis Uo5] Length = 325 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + +++++ + ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVHDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|253575894|ref|ZP_04853228.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786 str. D14] gi|251844688|gb|EES72702.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786 str. D14] Length = 342 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 169/336 (50%), Positives = 230/336 (68%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ K P W + +A+ ++ E + +++ +Q+ + ++ ELA E Sbjct: 2 KQEMIANYEEKMAAPDFWDDNEKAQGIIAEMNAVKSSVDQYTALQNEYDELEMMAELAEE 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D S+ E +D+++++ ++E + + LL+ D +A LE+H GAGGTESQDW MLL Sbjct: 62 EGDESLAAEVADSVEKLVKKLEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAEKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D+ Sbjct: 122 RMYTRWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDA 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S V P + D +EIEI D +IDTYRASGAGGQH+NTTDSAVRITHIPTG Sbjct: 182 SGRRHTSFVSCDVVPEISDDVEIEIRNEDLKIDTYRASGAGGQHINTTDSAVRITHIPTG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ +A MLR+KLYE ++++++ + +++I WG QIRSYV Sbjct: 242 IVVTCQNERSQIKNRERAMTMLRSKLYERKIEEQQRELDEIRGEQSDIAWGSQIRSYVFH 301 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN+E + V+DGDLD F+ L + Sbjct: 302 PYSMVKDHRTNVETGNVGAVMDGDLDAFIDGYLRSQ 337 >gi|148263843|ref|YP_001230549.1| peptide chain release factor 2 [Geobacter uraniireducens Rf4] gi|146397343|gb|ABQ25976.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter uraniireducens Rf4] Length = 317 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 161/308 (52%), Positives = 223/308 (72%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +++ER ++ +S ++ D +L+EL E +D + L E ++ V + +F Sbjct: 1 MLKERTVMEKTLSAWDRFNRQVDDIRVLIELGSEAEDEATLAEVHGLNDELEKGVSHAEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + +LSG D++ ++ +++GAGGTESQDWA MLLRMY R+ E++ +KTE + G+EAG Sbjct: 61 QKMLSGPHDASSCFVSINSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQAGDEAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +K T + G YG+LK E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D IE++++ Sbjct: 121 VKGVTFSVSGEYGYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEVKVN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E+D R+DT+R+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQH NKA A +LRAKL Sbjct: 181 EADLRVDTFRSSGAGGQHVNTTDSAIRITHIPSGIVVACQTERSQHMNKATAMRVLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE ELQ+RE A K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDGDL+ Sbjct: 241 YERELQERESQAAEIGGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGDLE 300 Query: 345 DFMKATLA 352 +F+ A L Sbjct: 301 EFIVAFLM 308 >gi|313889933|ref|ZP_07823573.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN 20026] gi|313121699|gb|EFR44798.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN 20026] Length = 327 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +++ + + +E+ E+D S+ E Sbjct: 1 MTEPDFWNDTIAAQKTSQELNELKVKFDTFHNMENLSEETELYMEML--EEDESVKGELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 59 ESLLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E K+ E N + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQDKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD+D F+ A L + Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323 >gi|218961845|ref|YP_001741620.1| Protein chain release factor B [Candidatus Cloacamonas acidaminovorans] gi|167730502|emb|CAO81414.1| Protein chain release factor B [Candidatus Cloacamonas acidaminovorans] Length = 340 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 158/330 (47%), Positives = 222/330 (67%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + L K P W++ +AK + ++ L + + +K++ + L L E+ + Sbjct: 2 IMELEQKMNAPDFWEDQTQAKKISKQLSQLRDELEHLKKLDTVKGELETYLTLLDEDFNA 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +L E L RI+ +E + E L+ + D NDA L +H+GAGGTESQDWA MLLRMY Sbjct: 62 ELLAEAVSELPRIQSFIEKAEIECYLNDKYDHNDALLTIHSGAGGTESQDWAEMLLRMYA 121 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 WAEK + + ++ GEEAG+KS ++ IKG AYG LK E GVHRLVRISP+++ +R Sbjct: 122 HWAEKNDYSFDIIDSLPGEEAGLKSVSVEIKGDYAYGMLKSEIGVHRLVRISPFNAQGKR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TSF+S++VYP D+ +EIEI+ D +IDT+RASGAGGQ+VNTTDSAVRITH+PT + V Sbjct: 182 QTSFASVFVYPEFDEDLEIEINPKDLKIDTFRASGAGGQYVNTTDSAVRITHLPTNITVT 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQ +N+ +A ++L+++LY+ ++RE+ E+SKTEIGWG QIRSYV PYQM Sbjct: 242 CQNERSQMQNREKAMSILKSRLYQYYEEQREKEKKNLENSKTEIGWGNQIRSYVFHPYQM 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KD RTN E + V++GDL+DF+ A L Sbjct: 302 IKDHRTNYETGNVDKVMNGDLNDFIYAWLK 331 >gi|323135929|ref|ZP_08071012.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242] gi|322399020|gb|EFY01539.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242] Length = 322 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 203/309 (65%), Positives = 247/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L+ + I ++ L D L L+EL E D +E + L+ + + + +Q E Sbjct: 1 MRERTQLEEQMGAIDKLSRDLEDALTLVELGEEAGDEDTEKEGVEALKAVLKDAQRRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +L SGEAD ND ++E+H+GAGGTESQDWA ML RMY RWAE++KFK E +E GEEAGI Sbjct: 61 ALFSGEADGNDTFIEIHSGAGGTESQDWARMLFRMYARWAERKKFKVEVIEETAGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS TLL+KG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD IE+ I+E Sbjct: 121 KSGTLLVKGHNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDRIEVNINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSA+RITHIPTG+VV CQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPTGIVVACQAERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KRE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + +PS+VLDG+LDD Sbjct: 241 ELELEKREAEANKAAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPSEVLDGELDD 300 Query: 346 FMKATLAIK 354 FM+A+LA + Sbjct: 301 FMQASLAQR 309 >gi|54026461|ref|YP_120703.1| peptide chain release factor 2 [Nocardia farcinica IFM 10152] gi|76363350|sp|Q5YR52|RF2_NOCFA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54017969|dbj|BAD59339.1| putative peptide chain release factor 2 [Nocardia farcinica IFM 10152] Length = 372 Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats. Identities = 154/356 (43%), Positives = 222/356 (62%), Gaps = 4/356 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + E H + +++ Sbjct: 11 ELDATLKTVESVLDIEELRRRIDELEHQAADPDLWNDQDHAQRVTSELSHAQGELRRVED 70 Query: 62 IQDRLCDNLILLELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ RL D +L ELA E+ + L+E + +VE + +LLSGE D +A Sbjct: 71 LRRRLEDLPVLYELAEGEEGEARTAALEEADAERAALHSDVEAMEVRTLLSGEYDKREAL 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ DWA ML+RMY RWA++ + E + EEAGIKSAT +K P AY Sbjct: 131 VNIRSGAGGVDAADWAEMLMRMYIRWADRHGYPVEVYDTSYAEEAGIKSATFAVKTPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+ + V PVV+ + IE+ E++ R+D YR+SG Sbjct: 191 GTLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEVPETEIRVDVYRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ +NK A +L+AKL E + Q+ + Sbjct: 251 GGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRQEERAEMDA 310 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++++ WG Q+RSYVL PYQMVKDLRTN E +PS VL+GD+D F+++ + + Sbjct: 311 LKTNEGA-SWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLNGDIDGFIESGIRWR 365 >gi|51473471|ref|YP_067228.1| peptide chain release factor 2 [Rickettsia typhi str. Wilmington] gi|51459783|gb|AAU03746.1| peptide chain release factor 2 (RF-2) [Rickettsia typhi str. Wilmington] Length = 340 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 173/332 (52%), Positives = 236/332 (71%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL+ L T DP LW N A++L+RE+ +++ ++ ++ D L L +A E+D Sbjct: 2 RLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNLKSNFEDILELEAMAEVEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 L + + +++ + + E L S E+D N+ +LE++AGAGGTES DWA++++RMY Sbjct: 62 FETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEINAGAGGTESHDWASIMMRMY 121 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+AE+ FKT+ + + +GEE GIKS T+ I G AYGW K E GVHRLVRISP+++ + Sbjct: 122 LRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGK 181 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPT V Sbjct: 182 RMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTNTVT 241 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ +RSQHKNKAQA ML+AKLY+LE+QKR + + ++KT+ WG QIRSYVLQPYQ Sbjct: 242 QCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNANKTDNSWGHQIRSYVLQPYQ 301 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +VKDLRT+ E + VLDG+L++F+ A+LA+ Sbjct: 302 IVKDLRTDYETSDTKGVLDGNLENFVSASLAM 333 >gi|258591448|emb|CBE67749.1| Peptide chain release factor 2 (RF-2) [NC10 bacterium 'Dutch sediment'] Length = 334 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 162/319 (50%), Positives = 223/319 (69%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ +M+E++ L + + + I L D +LL L EE+D L+E +L+ Sbjct: 6 EFWADTSRAREIMKEQRALKDVVDQLVAIGGELDDLAVLLGLLREEEDPQALKELESSLR 65 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 ++ ++ + + ++ E DS +A L ++ GAGGTESQDWA MLLRMY RWAE +KTE Sbjct: 66 SLEGQIGALELTTFMAEEYDSGNAILSINPGAGGTESQDWAQMLLRMYLRWAETGSYKTE 125 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 +++ EEAGIKSAT+ + G AYG LK E GVHRLVRISP+D+N RRHTSF+S++VYP Sbjct: 126 IIDLLPAEEAGIKSATVTVSGKYAYGRLKAEIGVHRLVRISPFDANHRRHTSFASVFVYP 185 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D++I++ I + D RIDTYR+SGAGGQHVN TDSAVRITH+PT +VV CQ ERSQHKNK Sbjct: 186 EIDETIDVAIDDKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTNIVVSCQNERSQHKNK 245 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A A +LRA+LY+ +++E+ E K +I WG QIRSYVL PYQ+VKD RT +E + Sbjct: 246 AMAMKVLRARLYDHYRREQEKEMAKLEGEKKDIAWGSQIRSYVLAPYQLVKDHRTGLETS 305 Query: 334 SPSDVLDGDLDDFMKATLA 352 + VLDG+++ F+ A L Sbjct: 306 NVDKVLDGEIEPFIDAFLM 324 >gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis ATCC 51170] gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis ATCC 51170] Length = 369 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 159/354 (44%), Positives = 227/354 (64%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L+ +G + + + + +T + + W + +A+ +M + + Sbjct: 13 ELDKNLDMIGSHLNPEKLNTEIKEIEKQTLEENFWDDSQKAQEIMADLSDKKDNFKTFTS 72 Query: 62 IQDRLCDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L D LL++ E +D L E + L +K E+ + ++ L GE D N+AYL Sbjct: 73 FKEELKDQSDLLDIIEESNEDLESLNEIEEILNSLKKEIGSFKIKTELDGEYDKNNAYLV 132 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +HAGAGG E+ DWA ML+RMYTR+ EKR FK + ++++ E GIKSAT+ +KG AYG+ Sbjct: 133 IHAGAGGLEATDWAEMLMRMYTRFFEKRNFKFDVTDLNNEEAGGIKSATIHVKGSFAYGY 192 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE+GVHRLVRISP+DS+ RRHTSF+S+ ++P ++D + +EI D RIDTYRASGAGG Sbjct: 193 LKGEKGVHRLVRISPFDSSKRRHTSFASVDIFPELNDDMSVEIDPKDLRIDTYRASGAGG 252 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN TDSAVRITHIPTGV+ Q ERSQ +NK A +L AKL +++ ++ E + Sbjct: 253 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQ 312 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + T+I WG QIRSYV PY +VKD RTN E + V+DGD+D F+ LA K Sbjct: 313 GNYTQIAWGNQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDEYLANK 366 >gi|312898633|ref|ZP_07758023.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359] gi|310620552|gb|EFQ04122.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359] Length = 338 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 152/327 (46%), Positives = 212/327 (64%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + DP W + AK + +E L + ++ + D L +LA E++D S E Sbjct: 2 RMSDPDFWNSPDTAKAVSQEATKLKEEVQGHDDLVNEAADLSELYDLAAEDEDTSFTGEI 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 R+ E+E ++ LLSGE DS +A + HAGAGGTE+QDW M++RMY+RWAE+ Sbjct: 62 ERQYYRLVKELEKREVLLLLSGEYDSCNAIMAFHAGAGGTEAQDWTQMIVRMYSRWAEQH 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 + ++ G+EAG KS ++G NAYG+LK E+GVHRLVRISP+D+N RRHTSF++ Sbjct: 122 GYTIRMIDYQPGDEAGTKSCAFTVEGENAYGYLKSEKGVHRLVRISPFDTNGRRHTSFTA 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P + D E+EI+ D R+D +RASGAGGQHVN T SAVR+THIPTG+VVQCQ ERS Sbjct: 182 VDVMPELPDDAEVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVQCQNERS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +N+ LRAKL+ELE +K+E++ ++ I WG QIRSYV PY +VKD RT Sbjct: 242 QIQNREMCMKYLRAKLFELEEEKKEKLRAELTGTQQSIEWGSQIRSYVFHPYNLVKDHRT 301 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355 +E ++ V+DG++D F++ L K Sbjct: 302 GVETSNIQSVMDGNIDMFIEGYLQFLK 328 >gi|307705242|ref|ZP_07642109.1| peptide chain release factor 2 [Streptococcus mitis SK597] gi|307621191|gb|EFO00261.1| peptide chain release factor 2 [Streptococcus mitis SK597] Length = 325 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 211/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + +++++ + ILL+ E D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFQKMEELQDEVEILLDFLAE--DESVHEELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|56416847|ref|YP_153921.1| peptide chain release factor 2 [Anaplasma marginale str. St. Maries] gi|56388079|gb|AAV86666.1| peptide chain release factor 2 [Anaplasma marginale str. St. Maries] Length = 338 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 172/332 (51%), Positives = 227/332 (68%), Gaps = 2/332 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L+++ LW + AK L+ ER ++ ++ + ++ + + LL+LA +E D Sbjct: 2 EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDLA-DESDSE 60 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L L +++ V K+ E + SGEAD + +L + GAGGTES DWA MLLRMY R Sbjct: 61 FLDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVR 120 Query: 144 WAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 WA F TE ++ DGE AG+KS T+ I G AYGW K E GVHRLVRISP+DS+SRR Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ RSQH+N+A+A+++LR++LYE+ELQ++E+ S+ +IGWG QIRSYV+ PY+M Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKDLRT E VLDGDLD F+ A L K Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332 >gi|313672869|ref|YP_004050980.1| bacterial peptide chain release factor 2 (brf-2) [Calditerrivibrio nitroreducens DSM 19672] gi|312939625|gb|ADR18817.1| bacterial peptide chain release factor 2 (bRF-2) [Calditerrivibrio nitroreducens DSM 19672] Length = 371 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 186/352 (52%), Positives = 251/352 (71%), Gaps = 3/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + ++ ++LS + +T DP W E+K L++E+ + + + Sbjct: 13 LKEKFKRFKNIVNEEHLKEKLSNIEKQTHDPDFWS-SKESKHLLKEQSSIKKFLDDWYYL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R D +LLEL +E+ ++ E +N +K V + + +L+GE D N+A L +H Sbjct: 72 VRRFEDMDVLLEL--QEEGENVAAEIEENFTELKQIVNDFELKLILNGENDINNAILTIH 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWANMLLRMY RWAE RKFK E L+ G+EAGIKSATL I GP AYG+LK Sbjct: 130 SGAGGTEANDWANMLLRMYIRWAENRKFKYEMLDYQAGDEAGIKSATLNIIGPYAYGYLK 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SP+D+N++RHTSF+S++V P ++D ++I I+ESD +IDT+RA GAGGQH Sbjct: 190 GETGVHRLVRLSPFDANNKRHTSFASVFVLPEIEDDVDIVINESDLKIDTFRAGGAGGQH 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQHKNKA A +L++KLYELE++K+ + N ESS Sbjct: 250 VNTTDSAVRITHLPTGIVVSCQNERSQHKNKAHALKILKSKLYELEMEKKNKEKNELESS 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEI +G QIRSYVL PY+MVKDLRT E +P VLDG+LDDF+++ L K Sbjct: 310 KTEINFGSQIRSYVLHPYKMVKDLRTRHETGNPDAVLDGELDDFIRSYLFYK 361 >gi|329946372|ref|ZP_08293939.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str. F0386] gi|328527348|gb|EGF54346.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str. F0386] Length = 373 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 147/357 (41%), Positives = 218/357 (61%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D ++ELA EE D IL E +L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGDDAAEILAEAESDLTAISKDLSDLEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ ++ + L EEAG+KS T + P AY Sbjct: 131 VTIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L+ + E+ Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQ-QEEDAKKK 309 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVL PYQMVKDLRT+ E +P V DGD+D F+ A + +K Sbjct: 310 ELAGDVKASWGDQMRSYVLNPYQMVKDLRTSFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|318040666|ref|ZP_07972622.1| peptide chain release factor 2 [Synechococcus sp. CB0101] Length = 356 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 143/341 (41%), Positives = 210/341 (61%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + +A+ MR+ + + + + Q + D Sbjct: 3 RTVFDVPALKARQQDLEQLASQPDFWDDQKQAQAKMRQLDEVKAQLEQLSQWQGAVADAE 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +E+ E D +L E+++ LQ+++ +++ + E LLSG D A + ++AGAGGT++ Sbjct: 63 ATVEIYGLEPDEELLSESNEALQKLRSDLDRWELERLLSGPYDKEGAVISINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML+RMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I + D I T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRT E T V+DGDLD F+++ L Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343 >gi|306823395|ref|ZP_07456770.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC 27679] gi|309802644|ref|ZP_07696748.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022] gi|304553102|gb|EFM41014.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC 27679] gi|308220708|gb|EFO77016.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022] Length = 380 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 211/353 (59%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L + +P LW + A+ + + + + + + Sbjct: 16 EARAKYESISKALDVDRLTVQAKELEVQATEPGLWDDPENAQKITSKLSAVQSQLKRLAS 75 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE+D L+E + ++ I+ +++ + ++LL GE D A + + Sbjct: 76 ASQRIDDVETLVELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTI 135 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + Sbjct: 136 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 195 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ Sbjct: 196 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 255 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 256 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 315 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 367 >gi|270157123|ref|ZP_06185780.1| peptide chain release factor 2 [Legionella longbeachae D-4968] gi|289164472|ref|YP_003454610.1| peptide chain release factor 2 [Legionella longbeachae NSW150] gi|269989148|gb|EEZ95402.1| peptide chain release factor 2 [Legionella longbeachae D-4968] gi|288857645|emb|CBJ11485.1| putative peptide chain release factor 2 [Legionella longbeachae NSW150] Length = 336 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 170/330 (51%), Positives = 230/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + E +W N A+ L RE+ L+ +S + ++ + D L E+A EE D Sbjct: 2 EEVVRELESSTIWDNPEVAQALGREQTQLEALVSTLTQLGQSITDLNELFEMAREESDEQ 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + E S+ LQ ++ +V +F + SG+ D ++AYL++ +G+GGTE+QDWA MLLRMY R Sbjct: 62 TINEISEELQTVEKKVADLEFRRMFSGKMDDSNAYLDIQSGSGGTEAQDWAEMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E+ F TE +E G+ AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRH Sbjct: 122 WGEQHGFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF++++V P +DD I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQC Sbjct: 182 TSFAAVFVSPEIDDDIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQH+NK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + Sbjct: 242 QTDRSQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVL-DQSRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E ++ VLDG LD F++A+L Sbjct: 301 KDLRTGVETSNTQAVLDGALDQFIEASLKA 330 >gi|313679114|ref|YP_004056853.1| bacterial peptide chain release factor 2 (brf-2) [Oceanithermus profundus DSM 14977] gi|313151829|gb|ADR35680.1| bacterial peptide chain release factor 2 (bRF-2) [Oceanithermus profundus DSM 14977] Length = 370 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 216/353 (61%), Gaps = 5/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L+ LGG+FD RL L + LW + A+ L +E L + ++ Sbjct: 5 ELKQKLDALGGIFDIAGKKARLEELEKELGQEGLWDDPAAAQKLTQEAARLKKVVEEYEQ 64 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L + L + A E+ S+ E + +++ E ++LL E +A L + Sbjct: 65 LSGDLESLIELWDEASPEERESLEPELEEAAKKL----EDLYHQTLLGFEHAEKNAILTI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTE+ DWA MLLRMYTRWAE+ FK E +++ G EAGI SA L+++G NAYG L Sbjct: 121 KPGAGGTEAMDWAEMLLRMYTRWAERHGFKVELVDVTPGPEAGIDSAELIVRGENAYGLL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHRLVR SP+DS RRHTSF+S+ V P VDD++EIEI D RID +RA G GGQ Sbjct: 181 SAERGVHRLVRPSPFDSTGRRHTSFASVEVSPEVDDTVEIEIKPEDLRIDVFRAQGHGGQ 240 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRI H+PTG++V Q RSQHKNK A +L+++L+E E QKR+E Sbjct: 241 GVNTTDSAVRIVHLPTGIIVTSQATRSQHKNKELAMKVLKSRLFEREWQKRQEEMAKLRG 300 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + I WG QIRSYVL Q VKD RT + + P VLDGDLDD + A L + Sbjct: 301 EQKAIEWGSQIRSYVL-DKQYVKDHRTGLMRHDPDKVLDGDLDDLIWAGLEWR 352 >gi|218132301|ref|ZP_03461105.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC 43243] gi|217992816|gb|EEC58817.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC 43243] Length = 333 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 223/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + +++ M+E + L ++ E++ + D L+ +A EE+D S++ E Sbjct: 1 MEAPGFWDDADKSQEAMKELKSLKDSFEKYNELKQGMDDIETLIAMADEENDESLVPEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + + + +LLSGE D ++A L +HAGAGGTE+ DW ML+RMYTRWAE + Sbjct: 61 EEFNVFEKKFDALRIGTLLSGEYDRDNAILTLHAGAGGTEACDWCQMLMRMYTRWAESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +KTE ++ +G+EAG+K+ T+ I+G NAYG+L+ E G+HRLVRISP+++ +R TSF S Sbjct: 121 YKTEVVDYLEGDEAGVKAVTIEIEGENAYGYLRSEHGIHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDVDVEINDDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+NK +A ML+AKLY L+ Q+ E + ++ +G QIRSYVLQPY MVKD RTN Sbjct: 241 HQNKDKAMQMLKAKLYLLKKQENAEKTSDIRGDVKDVNFGSQIRSYVLQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + VLDG++D F+ A L + Sbjct: 301 EEVGNAQSVLDGNIDPFITAYLKWQ 325 >gi|255528153|ref|ZP_05394980.1| peptide chain release factor 2 [Clostridium carboxidivorans P7] gi|255508166|gb|EET84579.1| peptide chain release factor 2 [Clostridium carboxidivorans P7] Length = 326 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 158/323 (48%), Positives = 225/323 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W + +A+ + E + L + + KE++ ++ D L +LA+EE+D S ++ Sbjct: 1 MQEPNFWNDTDKAQEITSEERFLKSRLDKYKELETKIQDAEFLTKLAIEENDLSSSKDII 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ I E E + E LLSGE D N+A +++H G GGT++QDW MLLRMYTRWAEK+ Sbjct: 61 REVEEIDNETERFRIEILLSGEYDKNNAIMDIHVGVGGTDAQDWTEMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++I E+AGIKSATL I G AYG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 FKIETVDILPAEDAGIKSATLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASI 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + ++ +I+I D ++DTYR+SGAGGQHVN T+SA+RITHIPTG+VVQCQ +RSQ Sbjct: 181 EVLPELTNNQDIDIKPDDIKVDTYRSSGAGGQHVNKTESAIRITHIPTGIVVQCQNQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H N+ +A ML+AKL EL+ + +E ++GWG QIRSYV QPY MVKD RT+ Sbjct: 241 HHNREEAMRMLKAKLAELKERAHKEKIEDLTGELKDMGWGSQIRSYVFQPYTMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 +E + + V+DGD+D F+ L Sbjct: 301 VECGNINAVMDGDIDQFINEYLK 323 >gi|325963891|ref|YP_004241797.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter phenanthrenivorans Sphe3] gi|323469978|gb|ADX73663.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter phenanthrenivorans Sphe3] Length = 371 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 142/352 (40%), Positives = 219/352 (62%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + D + + ++ L+ + +P LW + A+ + H + + + + Sbjct: 13 LRATYESIERVSDVEALKEDIAELSERAGEPDLWDDPSAAQKITSRLSHRQSELERLNNL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+EL +EDD + + E + L+ IK ++ + +LLSGE D +A + + Sbjct: 73 ASRIDDLEVLVELGQDEDDAASMGEAAAELESIKKALKELEVVTLLSGEYDEREAVVSIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T ++ EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI +++ R+D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG VV Q E+SQ +N+A A +L+++L L+ ++E+ + Sbjct: 253 VNTTDSAVRLTHIPTGTVVSMQNEKSQLQNRAAAMRVLQSRLLLLKK-EQEDAEKKALAG 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + S V DG++DDF+ A + + Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363 >gi|322804442|emb|CBZ01992.1| peptide chain release factor 2 [Clostridium botulinum H04402 065] Length = 325 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 150/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322 >gi|66044558|ref|YP_234399.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae B728a] gi|63255265|gb|AAY36361.1| Peptide chain release factor 2 [Pseudomonas syringae pv. syringae B728a] Length = 329 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 175/327 (53%), Positives = 236/327 (72%), Gaps = 1/327 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 +N + EDP++W N A+ L RER L + + E+ L D LL ++ EE+D + + Sbjct: 1 MNRELEDPNVWNNPAYAQELGRERSLLAQIVETLDEMSSGLADAKDLLLMSAEEEDQAAV 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + + ++R++ +E +F + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA Sbjct: 61 DDVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 +KR F +E+ GE AGIK AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTS Sbjct: 121 DKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FS+++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ Sbjct: 181 FSAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQN 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH NK A MLRA+LYE E+QKR + E +K++IGWG QIRSYVL +KD Sbjct: 241 ERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRSYVL-DASRIKD 299 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRTNIE++ VLDGD+D+++ A+L Sbjct: 300 LRTNIERSDCDKVLDGDIDEYLIASLK 326 >gi|153932889|ref|YP_001382578.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 19397] gi|153936079|ref|YP_001386131.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall] gi|152928933|gb|ABS34433.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 19397] gi|152931993|gb|ABS37492.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall] Length = 325 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 149/323 (46%), Positives = 216/323 (66%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322 >gi|225350864|ref|ZP_03741887.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158320|gb|EEG71562.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 376 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L + +P LW N A+ + + + + + + Sbjct: 12 EARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDNPENAQKVTSKLSAVQSQLKRLAS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE+D L E ++ I+ ++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGQEEEDADTLAEAQSEVESIQNDLADMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 363 >gi|148992417|ref|ZP_01822112.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68] gi|147928734|gb|EDK79747.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68] gi|332073119|gb|EGI83598.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570] Length = 325 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ + +E L N + ++++ + ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 AQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|301801602|emb|CBW34300.1| peptide chain release factor 2 [Streptococcus pneumoniae INV200] Length = 325 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ + +E L N + ++++ + ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE--DESVHDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 AQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|226947396|ref|YP_002802487.1| peptide chain release factor 2 [Clostridium botulinum A2 str. Kyoto] gi|226842678|gb|ACO85344.1| peptide chain release factor 2 [Clostridium botulinum A2 str. Kyoto] Length = 325 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 150/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ Sbjct: 180 EILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322 >gi|322392321|ref|ZP_08065782.1| peptide chain release factor RF2 [Streptococcus peroris ATCC 700780] gi|321144856|gb|EFX40256.1| peptide chain release factor RF2 [Streptococcus peroris ATCC 700780] Length = 325 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 207/325 (63%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L + + ++ + + ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKHTYNTFHKMDELQDEVEILLDFLAE--DESVKDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EKLDELAQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|145593537|ref|YP_001157834.1| peptide chain release factor 2 [Salinispora tropica CNB-440] gi|189040004|sp|A4X3K6|RF2_SALTO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|145302874|gb|ABP53456.1| bacterial peptide chain release factor 2 (bRF-2) [Salinispora tropica CNB-440] Length = 373 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 161/354 (45%), Positives = 220/354 (62%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D + L P LW + A+ + + +++ I+ + E+ Sbjct: 13 LDATLRNIESVLDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSYVNGEINKLAEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +LLELA E D L E + + ++ + +LLSGE DS +A + + Sbjct: 73 RSRLDDAKVLLELAEAESDPGALTEVEAEVAGLAKAIDEMEVRTLLSGEYDSREALVAIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E++ R D YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRFDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A +L+A+L LE +++EE A + Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARL--LERKRQEEQAKLQGLK 310 Query: 303 KTEIG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G WG Q+RSYVL PYQMVKDLRT E +P+ V DG+LD F++A + +K Sbjct: 311 TDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGTPAAVFDGELDAFIEAGIRWRK 364 >gi|332522300|ref|ZP_08398552.1| peptide chain release factor 2 [Streptococcus porcinus str. Jelinkova 176] gi|332313564|gb|EGJ26549.1| peptide chain release factor 2 [Streptococcus porcinus str. Jelinkova 176] Length = 327 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +++ + + +E+ E+D S+ E Sbjct: 1 MTEPDFWNDTISAQKTSQELNELKVKFDTFHNMENLSEETELYMEML--EEDESVKGELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 59 ESLLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFQGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD+D F+ A L + Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323 >gi|297183299|gb|ADI19436.1| protein chain release factor b [uncultured bacterium HF0500_16O16] Length = 361 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 164/346 (47%), Positives = 227/346 (65%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD + + L+ L+ + W + A+ + +E + L + +E++ RL D Sbjct: 14 FGGIFDIETRQKTLASLDEEMASNEFWNDRQRAEQVTKEARTLRDLTQPWQELKGRLDDL 73 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLEL+ +EDD L++ L + + +F S+LS E D DA L +H+GAGGTE Sbjct: 74 AELLELSADEDDADTLKDLQIELSDVDETLGELEFFSMLSDEDDPKDALLVIHSGAGGTE 133 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA ML+RMY RW E+R F +E +++ G+EAGIK AT+ +KG AYG+LK E GVHR Sbjct: 134 AADWAEMLMRMYGRWIERRGFTSEIMDLQPGDEAGIKGATIEVKGSYAYGYLKAEAGVHR 193 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+D+N RRHTSF+S++VYP VD ++E+ + D +IDTY+A GAGGQHVN T SA Sbjct: 194 LVRISPFDANKRRHTSFASVFVYPDVDSIPDVELRDEDLQIDTYKAGGAGGQHVNKTSSA 253 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV CQ ERSQ KNK A +L A+LY+ Q+ + ES+K I +G Sbjct: 254 VRITHLPTGIVVNCQNERSQLKNKGTAMKVLTARLYDHYKQEEMKKMEAVESTKKAIDFG 313 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYV QPY +VKD RT E + ++DGDLD F+ A L+ + Sbjct: 314 SQIRSYVFQPYTLVKDHRTGHESGNVQAIMDGDLDGFINAFLSAAQ 359 >gi|328955235|ref|YP_004372568.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium glomerans PW2] gi|328455559|gb|AEB06753.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium glomerans PW2] Length = 383 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 143/355 (40%), Positives = 209/355 (58%), Gaps = 5/355 (1%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + +L + D +R+ L ++ P W + A+ +M E + +S ++ + Sbjct: 17 AARLCEVESYLHLDEKRERIVELEQRSARPDFWDDGERARAVMEELSCARDDVSGVERAR 76 Query: 64 DRLCDNLILLELALE----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 RL D + L+LA E ++ + E + + E++ + S +GE D A + Sbjct: 77 TRLADAVAALQLASELEHGDEADELAAEATAAASELTREIDQMELSSWFTGEFDHGSAII 136 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + G GG E+QDW ML +MY ++ E+R +K + + GI AT ++G +A+G Sbjct: 137 TIKPGQGGLEAQDWTFMLFKMYMKYCERRGWKVTVNDCPPADVIGIDRATFTVEGKDAFG 196 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L+ E GVHRLVRISP D RR T+F+ + V PV+ D I++EI +D R+D Y ASG G Sbjct: 197 MLRAEAGVHRLVRISPTDDKKRRQTTFAGVEVIPVLPDDIDVEIDPTDIRVDVYHASGPG 256 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA +L+++L+ELEL+KREE + Sbjct: 257 GQGVNTTDSAVRVTHLPTGIVVTCQNERSQIQNKAACMQILKSRLFELELEKREEALDEI 316 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353 K IG+G QIRSYVL PYQMVKDLR+ +E + + VL DGDLD F+ Sbjct: 317 RGPKHTIGFGNQIRSYVLYPYQMVKDLRSGVETGNVASVLEDGDLDPFIIGYHRW 371 >gi|293365065|ref|ZP_06611782.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037] gi|307702226|ref|ZP_07639186.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037] gi|291316515|gb|EFE56951.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037] gi|307624239|gb|EFO03216.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037] Length = 325 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + +++++ + ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAE--DESVHDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EQLTELDMMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|254497462|ref|ZP_05110255.1| peptide chain release factor 2 [Legionella drancourtii LLAP12] gi|254353277|gb|EET12019.1| peptide chain release factor 2 [Legionella drancourtii LLAP12] Length = 335 Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats. Identities = 171/330 (51%), Positives = 226/330 (68%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + E +W N A+ L RER L+N + + + + D L ELA EE+D Sbjct: 2 EEVVRELESSTVWNNPEVAQALGRERTQLENVVFTLSGLSQSIIDLTELFELAREENDEQ 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + E L+ I+ +V +F + SG D +AYL++ +G+GGTE+QDWA MLLRMY R Sbjct: 62 AINEIGAELETIEQKVADLEFRRMFSGRMDGCNAYLDIQSGSGGTEAQDWAEMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E+ F TE +E G+ AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRH Sbjct: 122 WGEQHGFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+++++ P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQC Sbjct: 182 TSFAAVFISPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQH+NK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + Sbjct: 242 QNDRSQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVL-DQSRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E ++ VLDG LD F++A+L Sbjct: 301 KDLRTGVETSNTQAVLDGALDQFIEASLKA 330 >gi|283769449|ref|ZP_06342347.1| peptide chain release factor 2 [Bulleidia extructa W1219] gi|283103974|gb|EFC05359.1| peptide chain release factor 2 [Bulleidia extructa W1219] Length = 346 Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 140/345 (40%), Positives = 209/345 (60%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + FD D Q + N W + +A+ +++E L + + ++ + D Sbjct: 1 MATRFDLDQKKQEIQKNNDLMAQEDFWNDQKKAQKIIKENNSLKDLVDQHTKLYETTLDL 60 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L + D + + + + + + LLSG D ++A LE+H GAGGTE Sbjct: 61 LASVTELQSSLDEDMKELVEEEYVQYDQDYALFEVRVLLSGPYDDHNAILEIHPGAGGTE 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA ML RMYTR+AE++ + + L+ GEEAG+KS ++ + G AYG+LK E GVHR Sbjct: 121 AMDWAGMLYRMYTRFAERKGYHLDVLDYQPGEEAGVKSVSMRVSGNMAYGYLKAENGVHR 180 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DSN+RRHTSF+S+ + P +D +EIEI + D + T R+SGAGGQH+N TDSA Sbjct: 181 LVRISPFDSNARRHTSFASVEIMPEFEDDLEIEIEDKDLDVITMRSSGAGGQHINKTDSA 240 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH PTG+ V Q +RSQ +N+ NML++KL +L+++++E+ A+ + WG Sbjct: 241 VRMTHKPTGITVFSQSQRSQLQNRETCLNMLKSKLLQLKIREQEQRASEIKGEVKANEWG 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV PY MVKDLRT E + V+DGD++ F+ + L + Sbjct: 301 SQIRSYVFAPYTMVKDLRTGYEVGNVQSVMDGDIEGFIDSYLRSQ 345 >gi|160914511|ref|ZP_02076726.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991] gi|158433669|gb|EDP11958.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991] Length = 346 Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 146/341 (42%), Positives = 209/341 (61%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD ++ L +T + W + A+ L+++ L + + +++ L Sbjct: 2 SRFDLAEKKHKIEELTARTMEESFWSDPQHAQTLIQQLNGLKDVVESYEQLDHALAGMEE 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L ++ D I + ++ E + + LLS E D ++A LE+H GAGGTES Sbjct: 62 TLTLLKDDFDTEIFELLEMEYHEMEERFEQFELKMLLSHEYDHSNAILELHPGAGGTESC 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY+RWAEK+ +K L+ G+EAGIKS T L++G AYG+LK E+GVHRLV Sbjct: 122 DWADMLYRMYSRWAEKKGYKVSVLDYLAGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DS RRHTSF+S+ V P +D IEIEI D ++T RASGAGGQH+N TDSA+R Sbjct: 182 RISPFDSGGRRHTSFASLDVMPQFNDEIEIEIRPEDLIVETKRASGAGGQHINKTDSAIR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + H PTG+V CQ RSQH+N+ +A +L++++Y+ ++++E + + WG Q Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRILKSRIYQKMIEEQEAKIAEIKGEQKANEWGSQ 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IRSYV PY MVKD RT E + V+DG+LD F+ A L Sbjct: 302 IRSYVFHPYSMVKDHRTGYETSDTQSVMDGNLDAFIFAYLK 342 >gi|239981919|ref|ZP_04704443.1| peptide chain release factor 2 [Streptomyces albus J1074] Length = 355 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 154/349 (44%), Positives = 214/349 (61%), Gaps = 1/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW + A+ + + HL + + ++ RL Sbjct: 1 MESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRSRL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L ELA EDD E L ++ ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGDGGN- 299 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 348 >gi|119952877|ref|YP_945086.1| peptide chain release factor 2 [Borrelia turicatae 91E135] gi|119861648|gb|AAX17416.1| bacterial peptide chain release factor 2 [Borrelia turicatae 91E135] Length = 353 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 148/354 (41%), Positives = 226/354 (63%), Gaps = 4/354 (1%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M +L GG FD + +L + D + W + +A+ +++ + L I + Sbjct: 1 MNFWNKLKMSGGSFDSNKIKVKLKEYEKQINDENFWNDNKKAQEILKNQNILKAKIEPWE 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ +L D L E+A E+D ++L + ++ +++ + ++ S + D N+A+L Sbjct: 61 DLICKLKDLRELCEIAESEEDTALLDQ---DINKLREQYKHLLTLSYFKEDIDINNAFLT 117 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H+GAGGTE+ DW +ML R+Y R++E+ +KTE +++ + E GIKS T+ IKG AYG+ Sbjct: 118 IHSGAGGTEACDWVSMLYRIYLRYSERHGYKTELIDLLEAE-GGIKSVTIEIKGEYAYGF 176 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E G+HRLVRISP+D+ +RHTSF+S+++ PV+DD IEI I D R+DTYRASGAGG Sbjct: 177 LKSEVGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEITIKPEDIRVDTYRASGAGG 236 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T SAVRITH+ TG+V Q Q +RSQH+NK A +L++KLYE ++ + + Sbjct: 237 QHVNKTSSAVRITHLQTGIVTQSQTDRSQHRNKDLAMRVLKSKLYEHYKILEQQKSKSKQ 296 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSY+ QPY +VKD RT E + V+DG++D+F++ L K Sbjct: 297 EEKKDISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350 >gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411] gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC 43734] gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411] gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC 43734] Length = 377 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 164/358 (45%), Positives = 223/358 (62%), Gaps = 7/358 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R L K+ DP LW + A+ + E + + + +K + Sbjct: 12 LDGTLTTIEKVLDLDELGDRARELEEKSADPSLWDDPDHAQQVTSELSRVQSKLKKVKGL 71 Query: 63 QDRLCDNLILLELALEE--DDCSILQETSD----NLQRIKLEVEYKQFESLLSGEADSND 116 + RL D +L ++A EE DD QE + ++ E+E + ++LSGE D + Sbjct: 72 RQRLDDLPVLYDMAEEEAGDDPDAAQEAVQLADTEREELRQEIESLEVTTMLSGEYDERE 131 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A L + + AGG ++ DWA MLLRMYTRWAEK K E +I EEAGIKSAT++I G Sbjct: 132 AVLNIRSAAGGVDAADWAEMLLRMYTRWAEKAGHKVEVYDISYAEEAGIKSATIVIHGEY 191 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 YG L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+S Sbjct: 192 MYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIDENDVRVDVYRSS 251 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAEM 311 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + WG Q+R+YVL PYQMVKDLRTN+E PS VLDGDLD F++A + + Sbjct: 312 DALKGDG-SNSWGNQMRNYVLHPYQMVKDLRTNVEVNDPSKVLDGDLDGFLEAGIRWR 368 >gi|95929408|ref|ZP_01312151.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684] gi|95134524|gb|EAT16180.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684] Length = 312 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 159/307 (51%), Positives = 220/307 (71%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +++ER L + + D +L+EL E +D + E + L ++ +V+ +F Sbjct: 1 MLKERTALQKLVDGWTSAAQTVEDLEVLVELGAESEDEATRDEVRELLPELERQVDKMEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +LSGE DS++A L ++AGAGGTE+QDWA+MLLRMY R+ + + FKT+ + G++AG Sbjct: 61 ARMLSGEHDSSNAILSINAGAGGTEAQDWADMLLRMYLRFCDIKGFKTKITDYQPGDDAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KS T ++G AYGWL+ E G+HRLVRISP+D+ S+RHTSF S++V+P +DDSIE+E+ Sbjct: 121 VKSVTFTVEGDYAYGWLRPEMGIHRLVRISPFDAASKRHTSFCSVFVFPELDDSIEVELL 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + D +IDT+RASGAGGQH+N TDSA+RITHIP+G+VV CQ +RSQH NKA+A L+A+L Sbjct: 181 DKDMKIDTFRASGAGGQHINKTDSAIRITHIPSGIVVACQDQRSQHNNKAEAIRQLKARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE QK+EE AN K EIGWG QIRSYVL PY+MVKD RT E + VLDG ++ Sbjct: 241 YELERQKKEEEANALSGDKKEIGWGSQIRSYVLHPYRMVKDHRTGFEVGNADSVLDGHIE 300 Query: 345 DFMKATL 351 F++A L Sbjct: 301 GFIEAYL 307 >gi|154175392|ref|YP_001408592.1| peptide chain release factor 2 [Campylobacter curvus 525.92] gi|112803979|gb|EAU01323.1| peptide chain release factor 2 [Campylobacter curvus 525.92] Length = 372 Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats. Identities = 167/354 (47%), Positives = 233/354 (65%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ ++ +G + + +RL + +P WQ++ +A L +E+ + N ++ Sbjct: 16 RLNTKVENIGSIIKPQSIKERLQEIERLEHEPDFWQDIAKAGALNKEKTKISNMLAKFTN 75 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L ELA E D L D+ ++ ++ + LLSGE D+ +A + + Sbjct: 76 AKAAVDDAKELYELANSESDEETLNSLFDDATELENKITALEISMLLSGEDDNKNAIISI 135 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+K + ++KG NAYG+L Sbjct: 136 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYL 195 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D +IDTYRASGAGGQ Sbjct: 196 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEIDDDIEIEIEEKDLKIDTYRASGAGGQ 255 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PTG+VVQCQ +RSQHKN+A A ML+++LYELEL K++E +N Sbjct: 256 HVNKTESAIRITHMPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASN--SV 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 314 EKSEIGWGHQIRSYVLFPYQQVKDNRSGQAFSQTDAILDGDIKKMIEGVLISQK 367 >gi|168177506|ref|ZP_02612170.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916] gi|182671219|gb|EDT83193.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916] Length = 325 Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats. Identities = 149/323 (46%), Positives = 216/323 (66%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322 >gi|170743911|ref|YP_001772566.1| peptide chain release factor 2 [Methylobacterium sp. 4-46] gi|168198185|gb|ACA20132.1| peptide chain release factor 2 [Methylobacterium sp. 4-46] Length = 321 Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats. Identities = 212/309 (68%), Positives = 255/309 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MR+R L+ A++ I+ ++ L D L+EL E D + ++E + ++ ++ E +Q E Sbjct: 1 MRDRNDLEEAVASIRRLEQGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LL+GEAD ND YLEVHAGAGGTESQDWANML RMY RWAE+RK+K + +E +GEEAGI Sbjct: 61 TLLAGEADGNDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVDIVEWSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD I IE+ E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRITIEVKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDGD+D Sbjct: 241 ELELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTSPDDVLDGDIDP 300 Query: 346 FMKATLAIK 354 F++A+LA + Sbjct: 301 FIEASLAQR 309 >gi|15674713|ref|NP_268887.1| peptide chain release factor 2 [Streptococcus pyogenes M1 GAS] gi|71910343|ref|YP_281893.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS5005] gi|13621834|gb|AAK33608.1| putative peptide chain release factor 2 [Streptococcus pyogenes M1 GAS] gi|71853125|gb|AAZ51148.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes MGAS5005] Length = 337 Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats. Identities = 149/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L +P W + I A+ +E L +Q+ + +LLE+ Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D S+ +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LL Sbjct: 59 DEDDSLKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNANGFKIEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334 >gi|170751458|ref|YP_001757718.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM 2831] gi|170657980|gb|ACB27035.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM 2831] Length = 321 Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats. Identities = 218/309 (70%), Positives = 254/309 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD A++ IK+++ L D L+EL E D S ++E + ++ E +Q E Sbjct: 1 MRERQQLDEAVTAIKKLERDLEDGATLIELGEMEGDESSIREGEAAILAVEKEAASRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWANML RMY RWAE+RK+K E +E+ DGEEAGI Sbjct: 61 TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVEVVEMTDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD IEIEI E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSSARRHTSFASVWVYPVIDDRIEIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KREE AN ++KT+IGWG QIRSYVLQPYQ+VKDLRT + T P +VLDGDLD Sbjct: 241 ELELKKREEKANAEAAAKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300 Query: 346 FMKATLAIK 354 FM+A+LA + Sbjct: 301 FMEASLAQR 309 >gi|315658891|ref|ZP_07911758.1| peptide chain release factor RF2 [Staphylococcus lugdunensis M23590] gi|315496015|gb|EFU84343.1| peptide chain release factor RF2 [Staphylococcus lugdunensis M23590] Length = 334 Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats. Identities = 155/327 (47%), Positives = 214/327 (65%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W + +A+ ++ + L ++ + + D EL EE D + E Sbjct: 1 MMTEPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 N+ +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ Sbjct: 61 EMNVLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQN 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P ++ IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAQEMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E V+DGD+ F++A L + Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRQQ 327 >gi|307720247|ref|YP_003891387.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas autotrophica DSM 16294] gi|306978340|gb|ADN08375.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas autotrophica DSM 16294] Length = 365 Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats. Identities = 174/355 (49%), Positives = 239/355 (67%), Gaps = 3/355 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + ++ + G+ + RL + D W N A + +E+ L + Sbjct: 12 NIDMKMKNITGVVEPKKIQTRLQEIQELENDQDFWNNADYAAKIQKEKTQLQRKLDKYNT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L ++A EEDD L+ ++ ++ ++ + E LLSGE D+N+A L + Sbjct: 72 AKNAVEDAKELYDMAKEEDDSESLEALYEDAPNLEKQIRDMEIEVLLSGETDANNAILSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY RWAE+R FK E L+ G+EAGIK ++LIKG NAYG+L Sbjct: 132 HPGAGGTESQDWAEMLLRMYKRWAERRGFKVEVLDYQAGDEAGIKDVSVLIKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+I I + D RIDTYR+SGAGGQ Sbjct: 192 KVENGIHRLVRISPFDSNAKRHTSFASVMVSPEIDDDIDITIEDKDIRIDTYRSSGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+R+THI TGVVVQCQ +RSQHKNKA A ML+++LYELEL E+ A Sbjct: 252 HVNKTESAIRLTHIETGVVVQCQNDRSQHKNKATAMKMLKSRLYELEL--EEQKAKEAGI 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIKK 355 +K+EIGWG QIRSYV+QPYQ VKD R+N ++ S +LDGD+D+ ++ +A+ + Sbjct: 310 AKSEIGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDNMIEGVLIAMNR 364 >gi|289706413|ref|ZP_06502771.1| peptide chain release factor 2 [Micrococcus luteus SK58] gi|289556908|gb|EFD50241.1| peptide chain release factor 2 [Micrococcus luteus SK58] Length = 373 Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats. Identities = 146/352 (41%), Positives = 218/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ L + P LW + EA+ + + H + I + Sbjct: 13 LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ELA EED+ S+L++ + L I+ +E + +LLSGE D DA + + Sbjct: 73 ESRIEDLETMVELAAEEDEPSLLEDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A L+RMY RWAE+R + T+ ++ EEAG+KS T + P A+G L Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ IEI ES+ ++D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L + E+ + Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAE-EDAKKKEMAG 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E+ +PS V DG +DDF+ A + + Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 363 >gi|284989796|ref|YP_003408350.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM 43160] gi|284063041|gb|ADB73979.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM 43160] Length = 370 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 153/354 (43%), Positives = 225/354 (63%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D + ++ L + P LW +V A+ L + +L + ++E Sbjct: 11 ELDTTLRSIEAVLDVDRLRREVAELEQQASAPDLWNDVEAAQALTSKLSYLQGDLRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L E+A+EE D + E L ++ ++ + +LLSGE DS +A + + Sbjct: 71 LRSRLDDVGLLHEMAVEESDEATAAEAERELASLRQAIDELEVRTLLSGEYDSREALVTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + AGG ++ D+A ML+RMY RWAE+ ++ E ++ EEAGIKSAT +K P AYG L Sbjct: 131 RSEAGGVDAADFAEMLMRMYLRWAERHRYPVELYDVSYAEEAGIKSATFAVKQPYAYGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + ++I E++ RID +R+SG GGQ Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVDIPENEIRIDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A +L+A+L L ++ E+ A + Sbjct: 251 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQARL--LARRQEEQRAEMDAL 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E + S VLDGD+D F++A + ++ Sbjct: 309 RGEGSSWGNQMRSYVLHPYQMVKDLRTEQETGNTSAVLDGDIDPFIEAGIRWRR 362 >gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484] gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484] Length = 372 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 173/353 (49%), Positives = 239/353 (67%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + + D+ + L L+ H+W +AK +++ R+ L+ I ++ Sbjct: 11 ELTERFEEVKESLKLDSMKEELKELDNLMASSHIWNQQEKAKKILQRRKWLEENIQQLEA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LL + EE+D + L++ + ++ + + LSGE D+ +AYL + Sbjct: 71 TEKVLSDIRELLHI-TEEEDLETQTLLKEELEKAEQMIKDMEIRAFLSGEMDAKNAYLTI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG E+ DWA MLLRMY RWAEK ++ E ++I + AGIKSATLLIKGP AYG+L Sbjct: 130 QAGAGGVEACDWAQMLLRMYRRWAEKHGYEVEVVDITPDDVAGIKSATLLIKGPYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D+N+RRHTSF+S+ V P +D+SI IEI E D ++T+RASGAGGQ Sbjct: 190 KGESGVHRLVRISPFDANARRHTSFASVTVVPQIDESINIEIREEDIEMETFRASGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN TD+AVRI H PTG+VV CQQERSQ++N+ +A +L+AKLY+L+LQ+ EE E Sbjct: 250 YVNKTDTAVRIRHKPTGIVVTCQQERSQYQNRMKALELLKAKLYQLKLQELEEKKRALEG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYV QPYQ+VKDLRT +E V+DG++D F++A L K Sbjct: 310 EKTEIGWGHQIRSYVFQPYQLVKDLRTGVEIGDVESVMDGEIDPFIEAYLRWK 362 >gi|73748409|ref|YP_307648.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1] gi|73660125|emb|CAI82732.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1] Length = 356 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 148/339 (43%), Positives = 209/339 (61%), Gaps = 2/339 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD ++ L T + +P WQ+ A+ M++ + ++ R+ D L Sbjct: 14 FDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELA 73 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 L+ E D S+ E + + E++ + SG+ D+ +A L VHAGAGG ESQDW Sbjct: 74 VLSRE--DPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDW 131 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRM+ RWAEK+ F E L+ GEEAGIKSATL I+G AYG+LK E GVHRL+R+ Sbjct: 132 AGMLLRMFMRWAEKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRL 191 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D++ RHTSF+ + + P +DS++I+I D +ID +R+SG GGQ+V +AVR+T Sbjct: 192 SPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVT 251 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR E + + WG QIR Sbjct: 252 HIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIR 311 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 312 SYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLR 350 >gi|319405668|emb|CBI79291.1| peptide chain release factor RF-2 [Bartonella sp. AR 15-3] Length = 332 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 216/320 (67%), Positives = 266/320 (83%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 LW + +A+ +MRERQ+L+++++ + RL + + L+ + EE+D I+ ET + +++ Sbjct: 2 LWNDAQKAQDMMRERQNLEDSMNSTQLFAQRLEECIELIAMGEEENDVGIIAETENTIRQ 61 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +K E++ +Q E LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E Sbjct: 62 LKSEIDKRQIEMLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSNS+RHTSF+SIWVYPV Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNSKRHTSFASIWVYPV 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VD++IE+++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A Sbjct: 182 VDENIEVDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 AW+MLRA+LYE EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKD RT +E T Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDSRTGLENTD 301 Query: 335 PSDVLDGDLDDFMKATLAIK 354 P VL+GDLD F++A LA + Sbjct: 302 PQTVLNGDLDAFIEAALAQR 321 >gi|160878415|ref|YP_001557383.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg] gi|160427081|gb|ABX40644.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg] Length = 333 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 161/324 (49%), Positives = 220/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P+ W + +++ M+E ++L + +S ++ + D L LLE+ EE+D ++ E Sbjct: 1 MEEPNFWDSQEKSQAYMKELKNLKDIVSEYNGLKQQYDDILTLLEMGYEEEDPDLIPEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L++ +E + +LLS E D ++A L +HAGAGGTES DWA+ML RMY RWA+K+ Sbjct: 61 QELEQFIDALEELRLNTLLSDEYDKDNAILTLHAGAGGTESCDWASMLYRMYQRWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + TE L+ DGEEAG KS TL I G NAYG LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 YTTELLDFLDGEEAGYKSVTLQINGLNAYGHLKSERGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ I+IEI++ D RIDTYR+SGAGGQHVN T SA+RITHIPTG VVQCQ ERSQ Sbjct: 181 DVMPDIEEDIDIEINDDDLRIDTYRSSGAGGQHVNKTSSAIRITHIPTGTVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKLY + ++ + +I +G QIRSYVLQPY MVKD RTN Sbjct: 241 FQNKDKAMQMLKAKLYLKKKEENAAKESGIRGEIRDINFGNQIRSYVLQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 + ++ VLDG++D F+ A L Sbjct: 301 TDVSNALGVLDGNIDPFINAYLKW 324 >gi|239917286|ref|YP_002956844.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus luteus NCTC 2665] gi|239838493|gb|ACS30290.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus luteus NCTC 2665] Length = 373 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 146/352 (41%), Positives = 217/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ L + P LW + EA+ + + H + I + Sbjct: 13 LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ELA EED+ S+L + + L I+ +E + +LLSGE D DA + + Sbjct: 73 ESRIEDLETMVELAAEEDEPSLLDDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A L+RMY RWAE+R + T+ ++ EEAG+KS T + P A+G L Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ IEI ES+ ++D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L + E+ + Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAE-EDAKKKEMAG 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E+ +PS V DG +DDF+ A + + Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 363 >gi|170755895|ref|YP_001779801.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra] gi|169121107|gb|ACA44943.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra] Length = 325 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 149/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + + +++ + D + L E+ EEDD + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E++ + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEEIDKFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + + EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ Sbjct: 180 EILPELTEDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322 >gi|223932890|ref|ZP_03624886.1| peptide chain release factor 2 [Streptococcus suis 89/1591] gi|330832393|ref|YP_004401218.1| peptide chain release factor 2 [Streptococcus suis ST3] gi|223898471|gb|EEF64836.1| peptide chain release factor 2 [Streptococcus suis 89/1591] gi|329306616|gb|AEB81032.1| peptide chain release factor 2 [Streptococcus suis ST3] Length = 325 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + + A+ +E L N ++ D ++ ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAE--DESVRDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW MLLRMY R+ + Sbjct: 59 EKLVELDKTMTAYEMTLLLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ G+EAGIKS TL GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + + ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q Sbjct: 179 EVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A +L+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT Sbjct: 239 YGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|187250476|ref|YP_001874958.1| peptide chain release factor 2 [Elusimicrobium minutum Pei191] gi|186970636|gb|ACC97621.1| Peptide chain release factor 2 [Elusimicrobium minutum Pei191] Length = 371 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 164/350 (46%), Positives = 224/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS ++ G L ++L+ L + W + A+ + +E + + Sbjct: 15 ELSARIKNAGALIRVGEKKEKLAKLEAEISKESFWNDSDNARQVSKEADAVKTELETFSA 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D + E+ALEE+ + + E S L +I+ E++ +F+ LS AD +A + + Sbjct: 75 LQKEMDDAVTYYEMALEENSETEMGEISSFLIKIENELKEIEFKIKLSDPADRLNAIMHI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA MLLRMYTRWAE K + +I GEEAG+KS +L+I+G AYG+L Sbjct: 135 HAGAGGTESCDWAQMLLRMYTRWAENHGLKVKITDILPGEEAGVKSVSLMIEGLYAYGYL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+NSRRHTSF+S V P ++D I+IEI E D +DT+R+ GAGGQ Sbjct: 195 KSENGVHRLVRISPFDANSRRHTSFASCDVLPDIEDEIKIEIEEKDLEVDTFRSGGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI HIPTG+VV CQ ERSQ +N+ A MLRAKLY++E K+ Sbjct: 255 NVNKVETAVRIKHIPTGIVVACQIERSQLQNRQTAMKMLRAKLYQIEADKKRSEMEKHYG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV PYQ+VKDLRT E + V+DGDLD FM++ L Sbjct: 315 QKGDIAWGHQIRSYVFMPYQLVKDLRTGYETSQVQAVMDGDLDAFMQSYL 364 >gi|194476812|ref|YP_002048991.1| peptide chain release factor 2 [Paulinella chromatophora] gi|171191819|gb|ACB42781.1| peptide chain release factor 2 [Paulinella chromatophora] Length = 354 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 149/342 (43%), Positives = 208/342 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W +A+ MR+ + + +++ Q + D Sbjct: 3 RTVFDVPALKARQQDLEQLASQPKFWDLQDQAQKQMRQLDEVREQLEKLRQWQGTIADAK 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D S+L E ++ +QR+K ++ + E LL+G D A + ++AGAGGT++ Sbjct: 63 ATLELYNIEPDESMLNEGNEGMQRLKNNLDRWELERLLNGTYDKGGAVISINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW+E K EI +GEEAGIKS T I G AYG+L+ E+G HRL Sbjct: 123 QDWARMLLRMYTRWSEDHGMKVNICEISEGEEAGIKSVTFEIDGSYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ I++ I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLNEDIDMFIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLMVIAQEQRAAEIADIRGEIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YV PYQMVKDLRTN E T V+DGDLD F++A L Sbjct: 303 QIRNYVFHPYQMVKDLRTNKETTDVQGVMDGDLDLFIQALLR 344 >gi|28896314|ref|NP_802664.1| peptide chain release factor 2 [Streptococcus pyogenes SSI-1] gi|28811565|dbj|BAC64497.1| putative peptide chain release factor 2 [Streptococcus pyogenes SSI-1] Length = 337 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 148/336 (44%), Positives = 212/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L +P W + I A+ +E L +Q+ + +LLE+ Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D + +E +NL ++ + LLS D N+A LE+H G+GGTE+QDW ++LL Sbjct: 59 DEDDFLKEELEENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334 >gi|315226283|ref|ZP_07868071.1| peptide chain release factor RF2 [Parascardovia denticolens DSM 10105] gi|315120415|gb|EFT83547.1| peptide chain release factor RF2 [Parascardovia denticolens DSM 10105] Length = 396 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 141/353 (39%), Positives = 209/353 (59%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D+ +++ L + P LW + A+ + + E Sbjct: 31 EARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTE 90 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 RL D L L +EE+D QE L+++ ++ + ++LL GE D+ A + + Sbjct: 91 AGQRLDDIDTLYSLGMEEEDEDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTI 150 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAE+ ++K + ++ EEAGIKSAT + P AYG L Sbjct: 151 RSGAGGVDAADWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKL 210 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+NSRR TSF+++ V P+V+ + I++ +SD R+DTY + G GGQ Sbjct: 211 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQ 270 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVR+TH+PTG+VV Q ERSQ +N+A A +L+++L L+ + E + Sbjct: 271 GVNTTYSAVRLTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQ-EEEAAKKKELA 329 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + P V DGD+D F+ A + + Sbjct: 330 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWR 382 >gi|153938890|ref|YP_001389537.1| peptide chain release factor 2 [Clostridium botulinum F str. Langeland] gi|152934786|gb|ABS40284.1| peptide chain release factor 2 [Clostridium botulinum F str. Langeland] gi|295317635|gb|ADF98012.1| peptide chain release factor 2 [Clostridium botulinum F str. 230613] Length = 325 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 148/323 (45%), Positives = 216/323 (66%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ Sbjct: 180 EILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322 >gi|306829186|ref|ZP_07462376.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249] gi|304428272|gb|EFM31362.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249] Length = 325 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 208/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFCKMEELQDEVEILLDFLAE--DESVHDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|289551384|ref|YP_003472288.1| peptide chain release factor 2 [Staphylococcus lugdunensis HKU09-01] gi|289180915|gb|ADC88160.1| peptide chain release factor 2 [Staphylococcus lugdunensis HKU09-01] Length = 334 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 154/327 (47%), Positives = 214/327 (65%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W + +A+ ++ + L ++ + + D EL EE D + E Sbjct: 1 MMTEPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ Sbjct: 61 EMDVLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQN 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFAS 180 Query: 209 IWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P ++ IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAQEMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E V+DGD+ F++A L + Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRQQ 327 >gi|282865194|ref|ZP_06274247.1| peptide chain release factor 2 [Streptomyces sp. ACTE] gi|282560117|gb|EFB65666.1| peptide chain release factor 2 [Streptomyces sp. ACTE] Length = 368 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 215/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSRLSHLQAEVRKTEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D L E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLGVLFELAEDEGDADALAEAEAELVSVRKALDEMEVRTLLSGEYDAREAVVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFTVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEIGNPEAVFNGEIDGFIEAGIRWRK 364 >gi|15639564|ref|NP_219014.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025803|ref|YP_001933575.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum SS14] gi|6093958|sp|O83585|RF2_TREPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|3322871|gb|AAC65552.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018378|gb|ACD70996.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum SS14] gi|291059953|gb|ADD72688.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum str. Chicago] Length = 368 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 214/342 (62%), Gaps = 1/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD R++ L P W A+ L+ E + L + + ++ D Sbjct: 15 YGGVFDVAAYEARIATLEAAAAAPDFWSERARAEALLAELKTLRATLEPWRALRRESADL 74 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L ELA E D S+ E S I E LL E D DA++ +H+GAGG E Sbjct: 75 RALYELAREAQDASLEPELSSLFSDISARFEEASLTRLLHEEVDRLDAFVTIHSGAGGVE 134 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA ML+RMYTRWAE+R F +++ + E G+KS TL I G +A+G+LKGE GVHR Sbjct: 135 ACDWAQMLMRMYTRWAERRSFCVHIVDLLESE-GGVKSVTLKICGSHAFGFLKGETGVHR 193 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DS +RRHTSF+S +V+PV+DD +E+ I D R+DTYR+ GAGGQHVN TDSA Sbjct: 194 LVRISPFDSAARRHTSFTSTYVFPVLDDHVEVHIRSEDMRVDTYRSGGAGGQHVNKTDSA 253 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV CQ ERSQ N+A A ++LRA+LY E QK+++ S K +I WG Sbjct: 254 VRITHLPTGIVVTCQNERSQISNRATALSLLRARLYAYERQKKQQEHQRFASEKKDISWG 313 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYV PY MVKD R+ E + V+DG L+ F+++ L Sbjct: 314 NQIRSYVFHPYTMVKDHRSKCETGNIHAVMDGALEPFIRSYL 355 >gi|317124427|ref|YP_004098539.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium calvum DSM 43043] gi|315588515|gb|ADU47812.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium calvum DSM 43043] Length = 370 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 141/352 (40%), Positives = 219/352 (62%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + G+ D D +++ L + +P+LW + +A+ + + + + Sbjct: 12 LRATMDSVRGVTDLDVLAKQIVELERQASEPNLWDDQDKAQQVTSALSRANAERDRVLSM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D L+E+A EE D + E +L +IK ++ + +LLSGE D +A + + Sbjct: 72 DSRINDLETLVEMATEESDQDTMDEALRDLAKIKKDLGELEVRTLLSGEYDEREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T+ ++ EEAG+KSAT + P A+G L Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVNVPYAFGHLN 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ IEI E++ +ID +R+SG GGQ Sbjct: 192 VEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESDDSIEIPENELKIDVFRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L+ + E + Sbjct: 252 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLL-LQRKAEEAAVKKEMAG 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT+ E +P+ V DGD+D F++A + + Sbjct: 311 DVKASWGDQMRSYVLNPYQMVKDLRTDFETGNPAAVFDGDIDGFIEAGIRWQ 362 >gi|296876160|ref|ZP_06900214.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 15912] gi|312867359|ref|ZP_07727568.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405] gi|296432871|gb|EFH18664.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 15912] gi|311097060|gb|EFQ55295.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405] Length = 336 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 152/336 (45%), Positives = 213/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + I A+ +E L ++ D ++ ILL+ E Sbjct: 1 MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D S+ +E + L+ + + + LLS D+N+A LE+H G+GGTE+QDW +MLL Sbjct: 61 --DDSVKEELIEKLEELDKRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DGD+D F+ A L + Sbjct: 299 PYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334 >gi|293189308|ref|ZP_06608031.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309] gi|292821771|gb|EFF80707.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309] Length = 373 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 142/355 (40%), Positives = 221/355 (62%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D ++++ LN K P LW + A+ + H + + I ++ Sbjct: 12 LRTTMENIIAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQM 71 Query: 63 QDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +R+ D ++++A E+ D IL E +L++++ ++ + +LL GE D +A + Sbjct: 72 SERIDDLEAMVDMAAEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ D+A +LLRMY RWAE+ + T+ ++ EEAG+KSAT ++ P AYG Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GG Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L + E+ Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVL-RHEEEQAKKKEL 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 311 AGDVKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365 >gi|262203335|ref|YP_003274543.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247] gi|262086682|gb|ACY22650.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247] Length = 371 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 156/355 (43%), Positives = 221/355 (62%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R+ L + DP LW + A+ + E H + + E+ Sbjct: 12 LDATLTTVEKVLDLEELRRRIDELEMQASDPDLWNDQEHAQKVTSELSHAQSEFRKVSEL 71 Query: 63 QDRLCDNLILLELAL-EEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE D S L + + ++ ++E + +++L+GE D DA + Sbjct: 72 RQRLDDLPVLYELAEAEEGDDRVSALADADADRAALRADIEAMEVKTMLAGEYDQRDALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAG+KSAT +K P YG Sbjct: 132 NIRSGAGGVDAADWALMLMRMYIRWAEQHGYGVEVYDTSYAEEAGLKSATFAVKAPYMYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV + I+I E+D ++D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVQTTDHIDIDENDVKVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + Sbjct: 252 GQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQAKLLERKRQEERAELDAL 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT +E +PS VLDG+LD F++A + + Sbjct: 312 KGDGGS-SWGNQMRSYVLHPYQMVKDLRTGVEDNNPSAVLDGELDKFIEAGIRWR 365 >gi|293400349|ref|ZP_06644495.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306749|gb|EFE47992.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 346 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 152/341 (44%), Positives = 209/341 (61%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD ++ L KT + W + +A++++R+ + + + +Q L Sbjct: 2 SHFDLTARRYKIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALNSLDE 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL E+ D I + Q ++ + + LLS E D + A LE+H GAGGTES Sbjct: 62 TQELLKEDFDEEIFELFELEYQEMEKNFADFEIKVLLSHEYDHSSAILELHPGAGGTESC 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY+RWAEK +FK L+ G+EAGIKS T L++G AYG+LK E+GVHRLV Sbjct: 122 DWADMLYRMYSRWAEKHEFKVSVLDYQPGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+D+ RRHTSF+S+ V P +D IEIEI D ++T RASGAGGQH+N TDSAVR Sbjct: 182 RISPFDAGGRRHTSFASLDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + H PTG+V CQ RSQH+N+ +A +L+++LY+ ++++E + WG Q Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEVKANEWGSQ 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IRSYV PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 302 IRSYVFHPYSMVKDHRTNHETSDVQGVMDGDLDGFIFAYLK 342 >gi|269955834|ref|YP_003325623.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM 15894] gi|269304515|gb|ACZ30065.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM 15894] Length = 370 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 142/353 (40%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + G+ D +++ L+ + P LW + A+ + ++ +K + Sbjct: 13 LRSTLESIEGVSDPVALQAKIAVLSEQASVPDLWDDPEAAQKITSALSATQAELNRVKSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D L+EL E D L E + I+ +++ + +LLSGE D+ DA + + Sbjct: 73 GRRIDDVETLVELGQEMGDEDSLTEAEAEVVGIRKDLDALEVRTLLSGEYDARDAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ F T+ ++ EEAG+KSAT + P A+G L Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGFPTKVMDTSYAEEAGLKSATFEVNAPYAFGNLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI ES+ ++D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDSVEIPESEIKVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L Q+ E + Sbjct: 253 VNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLL-LVRQQEEAAKKKELAG 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E + + V DG +D+F++A + ++ Sbjct: 312 DIKASWGDQMRSYVLQPYQMVKDLRTEHESGNTAAVFDGAIDEFIEAGIRWRR 364 >gi|297243831|ref|ZP_06927761.1| protein chain release factor B [Gardnerella vaginalis AMD] gi|296888252|gb|EFH26994.1| protein chain release factor B [Gardnerella vaginalis AMD] Length = 378 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 142/351 (40%), Positives = 213/351 (60%), Gaps = 1/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + + D D+ ++ L + +P LW + A+ + + + + ++ ++ Sbjct: 14 EAKYSLISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 R+ D L+EL EE D + E + L I E++ + ++LL GE D+ A + + + Sbjct: 74 QRIEDTKTLIELGEEEGDADSMNEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRS 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ D+A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+VRISP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ V Sbjct: 194 EGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L+ E + Sbjct: 254 NTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK-HAEEAAKKKELAGD 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363 >gi|222475212|ref|YP_002563628.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Florida] gi|255003190|ref|ZP_05278154.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Puerto Rico] gi|222419349|gb|ACM49372.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Florida] Length = 338 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 171/332 (51%), Positives = 227/332 (68%), Gaps = 2/332 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L+++ LW + AK L+ ER ++ ++ + ++ + + LL++A +E D Sbjct: 2 EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVA-DESDSE 60 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L L +++ V K+ E + SGEAD + +L + GAGGTES DWA MLLRMY R Sbjct: 61 FLDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIR 120 Query: 144 WAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 WA F TE ++ DGE AG+KS T+ I G AYGW K E GVHRLVRISP+DS+SRR Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ RSQH+N+A+A+++LR++LYE+ELQ++E+ S+ +IGWG QIRSYV+ PY+M Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKDLRT E VLDGDLD F+ A L K Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332 >gi|315037900|ref|YP_004031468.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112] gi|325956373|ref|YP_004291785.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC] gi|312276033|gb|ADQ58673.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112] gi|325332938|gb|ADZ06846.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC] gi|327183192|gb|AEA31639.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1118] Length = 332 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 153/324 (47%), Positives = 204/324 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ L+ E L ++Q D +EL EE D + +ET Sbjct: 1 MAQPDFWNDQEKAQKLISENNVLKEKRDSFLKLQKGYEDESTAVELLREEPDPDLQKETE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ E + + LLSG+ DS++A +E+H GAGGTE+ DW MLLRMY R+ + Sbjct: 61 EDLATLQDEFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDSAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS + I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG L F+ + L Sbjct: 301 YETADANGVMDGKLQPFIYSYLQW 324 >gi|170759975|ref|YP_001785502.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch Maree] gi|169406964|gb|ACA55375.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch Maree] Length = 327 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 152/323 (47%), Positives = 216/323 (66%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W N+ EA+ + E ++L + + +++ + D + L E+ EEDD + +E Sbjct: 1 MQNPNFWNNIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FSIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322 >gi|269958738|ref|YP_003328525.1| peptide chain release factor 2 [Anaplasma centrale str. Israel] gi|269848567|gb|ACZ49211.1| peptide chain release factor 2 [Anaplasma centrale str. Israel] Length = 338 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 171/332 (51%), Positives = 227/332 (68%), Gaps = 2/332 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L+++ LW + AK L+ ER ++ ++ + ++ + + LL++A +E D Sbjct: 2 EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVA-DESDSE 60 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 L L +++ V K+ E + SGEAD + +L + GAGGTES DWA MLLRMY R Sbjct: 61 FLDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVR 120 Query: 144 WAEK-RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 WA F TE ++ DGE AG+KS T+ I G AYGW K E GVHRLVRISP+DS+SRR Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ RSQH+N+A+A+++LR++LYE+ELQ++E+ S+ +IGWG QIRSYV+ PY+M Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKDLRT E VLDGDLD F+ A L K Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332 >gi|325478551|gb|EGC81663.1| peptide chain release factor 2 [Anaerococcus prevotii ACS-065-V-Col13] Length = 347 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 159/345 (46%), Positives = 227/345 (65%), Gaps = 2/345 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + LFD + L K++ P W + A+ M + + + +++D + DN Sbjct: 1 MEILFDPARLKDEIEKLEKKSQSPDFWNDSDAAQKTMADLALKKDDLEDYNKLKDGIADN 60 Query: 70 LILLELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +L+L +D + ++E +L+++ + + ++ LSGE D N+AYL ++AGAGG Sbjct: 61 TDMLDLVELSEDSELKTIEEVEISLKKLDKLAQAMKLKTQLSGEYDKNNAYLSINAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ DWA+ML RMYTR+ + R FK + ++++ E GIKS T+ +KG AYG+LKGE+GV Sbjct: 121 LEATDWADMLFRMYTRYFDDRGFKYDIKDLNNEEAGGIKSVTIHVKGSYAYGYLKGEKGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DS SRRHTSFSS+ ++P +DD I+I+I SD RIDTYRASGAGGQHVN TD Sbjct: 181 HRLVRISPFDSQSRRHTSFSSVDIFPELDDDIQIDIDPSDLRIDTYRASGAGGQHVNKTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTGVV Q ERSQ +N+ A N+L +KL +++ +++ E + ++I Sbjct: 241 SAVRITHIPTGVVATSQAERSQIQNRQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIA 300 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYV QPY MVKD RTN E + V+DG++ F+ A LA Sbjct: 301 WGSQIRSYVFQPYTMVKDHRTNFEMGNVESVMDGNIQGFIDAYLA 345 >gi|218439666|ref|YP_002377995.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424] gi|218172394|gb|ACK71127.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424] Length = 360 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 152/343 (44%), Positives = 222/343 (64%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD ++ L + P W + A+ ++E L +++ ++ Q +L D Sbjct: 12 RTIFDLPALKAKIKDLEQRAAQPEFWDSPETAQSTLQELNELKSSLELYQQWQTQLEDAK 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + EL E+D S+LQE NLQ++ E+E + + LLSG D+ L ++AGAGGT++ Sbjct: 72 AISELLELEEDTSLLQEAQTNLQQLNHELERWELQQLLSGPYDAKGVLLTINAGAGGTDA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW EKR +K +E +G+EAGIKSATL I+G AYG+LKGE+G HRL Sbjct: 132 QDWAAMLLRMYTRWGEKRGYKVHLVESSEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRL 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VRISP+++N +R TSF+ + + P + ++++ +EI E D I T RA G GGQ+VN ++A Sbjct: 192 VRISPFNANGKRQTSFAGVEIMPNIEEEALNVEIPEKDLEITTSRAGGKGGQNVNKVETA 251 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+ H+PTG+ V+C +ERSQ +NK +A +L+AKL + +++R + E WG Sbjct: 252 VRVVHLPTGIAVRCTEERSQLQNKEKALALLKAKLLVIAVEQRAQEIAEIRGDMVEAAWG 311 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YV PYQMVKDLRTN+E + V+DGDLD F++A L Sbjct: 312 NQIRNYVFHPYQMVKDLRTNVETSDIGAVMDGDLDAFIEAYLR 354 >gi|78187873|ref|YP_375916.1| peptide chain release factor 2 [Chlorobium luteolum DSM 273] gi|78167775|gb|ABB24873.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium luteolum DSM 273] Length = 363 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 150/345 (43%), Positives = 224/345 (64%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 N GG+FD D +++ L + +P W + A +++E + + +++ + Sbjct: 16 NSYGGIFDVDQRKEKIEDLEKVSGNPEFWNDQKAAHAVLKELNENRSWVEGYEKLAGKAE 75 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L +A E +D S +E + ++ I+ E+ +F+++LSG+ D +A + +HAGAGG Sbjct: 76 SCRDELAIADELEDESFERELTASIDAIEQEIAAIEFKNMLSGKDDPGNAIITIHAGAGG 135 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK E GV Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKVYTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGV 195 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SP+DSN+RRHTSF+S++ YP +EIE+ + D + T+R+ G GGQ+VN + Sbjct: 196 HRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVE 255 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVRI HIP+G+VV CQQERSQ +N+ +A ML A+LY+ + ++ + E K +I Sbjct: 256 TAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREVEGKKKKIE 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL + +KD RTN E+ VLDGD+DDFM+ L+ Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDIDDFMEKYLS 359 >gi|57168993|ref|ZP_00368122.1| peptide chain release factor 2 [Campylobacter coli RM2228] gi|305432246|ref|ZP_07401409.1| peptide chain release factor RF2 [Campylobacter coli JV20] gi|57019659|gb|EAL56348.1| peptide chain release factor 2 [Campylobacter coli RM2228] gi|304444594|gb|EFM37244.1| peptide chain release factor RF2 [Campylobacter coli JV20] Length = 365 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 230/353 (65%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN G Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANAG--E 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|291287317|ref|YP_003504133.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM 12809] gi|290884477|gb|ADD68177.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM 12809] Length = 371 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 174/350 (49%), Positives = 243/350 (69%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTK-TEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L + +N + D + +S ++ DP+ W E+K+LM+E+ + E Sbjct: 13 LKKDINSFRTAMNEDELKKAISEVDNLSMSDPNFWN-SKESKVLMKEQAINKKKLEEWHE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D +L+EL E + + + +++ ++ + + + + +LSG+ D N+A + + Sbjct: 72 LTGLLEDTEVLIELYKE-GEQGVEADIETSIRTLEKTIAHFELKLVLSGQNDGNNAIITI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTE+ DWA ML RMYT +AE+ +K + L+ +GEEAGIK+AT+ IKG YG+L Sbjct: 131 NSGAGGTEANDWAAMLYRMYTHYAERNGYKCDILDYMEGEEAGIKNATINIKGAFTYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISPYDS +RRHTSF++++V P ++D IEI+ISE+D IDTYRASGAGGQ Sbjct: 191 KGETGVHRLVRISPYDSANRRHTSFAAVFVMPEIEDDIEIDISEADLHIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG VV CQ ERSQHKNKA A +L+++LYELE+ K+ E ES Sbjct: 251 HVNTTDSAVRITHVPTGTVVTCQSERSQHKNKAHAMKILKSRLYELEIDKKNEEKQKLES 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +KTEIGWG QIRSYV+ PY+MVKDLRT E + V+DG+LD F++A L Sbjct: 311 TKTEIGWGNQIRSYVMHPYKMVKDLRTRHETGNVDAVMDGNLDAFIRAYL 360 >gi|315638344|ref|ZP_07893523.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21] gi|315481555|gb|EFU72180.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21] Length = 370 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 172/353 (48%), Positives = 232/353 (65%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ + + D +LS + T+ DP+ W N A +L +E+ + N + + Sbjct: 13 LEQKVKNIASIIKPDELRVKLSEIETQENDPNFWNNAKNAAILGKEKTKITNLLKAYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ++A E D L+ ++ +++ + + LLSGE D+ +A + +H Sbjct: 73 FNALNDANELFDMANSESDDETLKALFEDAPKLEDSITSLEISMLLSGENDNKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +VVQCQ +RSQHKNKA A+ MLR++LYELEL K+E AN Sbjct: 253 VNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAAAN--SGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+E+GWG QIRSYVL PYQ VKD R+N ++ +LDGD+ ++ L K Sbjct: 311 KSEMGWGHQIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363 >gi|46580270|ref|YP_011078.1| peptide chain release factor 2, programmed frameshift [Desulfovibrio vulgaris str. Hildenborough] gi|46449687|gb|AAS96337.1| peptide chain release factor 2, programmed frameshift [Desulfovibrio vulgaris str. Hildenborough] gi|311233748|gb|ADP86602.1| hypothetical protein Deval_1446 [Desulfovibrio vulgaris RCH1] Length = 371 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 170/349 (48%), Positives = 226/349 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L Q + L G D RLS + + P W N + +++E+ L+ I+ ++ + Sbjct: 14 LFEQFSTLWGRLDLAGNRHRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEAL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L LA E++ L+ + + R++ +E + LLSG+ D A LE+H Sbjct: 74 ETCRNDVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+QDWA MLLRMY RWA+ +KTE L+ DG+EAGIKS TL I GPNAYG LK Sbjct: 134 PGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE+G+HRL+RISP+D++ RRHTSF+S+ V P V I+IEI ++D RID +R+SG GGQ Sbjct: 194 GERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQS 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+THIPTG+V QCQ E+SQH NK A +LR +LYELEL+K EE + Sbjct: 254 VNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K IG+G QIR+Y LQPY++VKD RTN E VLDG LD ++ L Sbjct: 314 KDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 362 >gi|332290838|ref|YP_004429447.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5] gi|332168924|gb|AEE18179.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5] Length = 368 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 159/351 (45%), Positives = 227/351 (64%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L D D + KT DP+ W + EA+ M+ + ++ +E Sbjct: 10 LQERVDGLRRYLDVDRKRIEIQNEEEKTFDPNFWNDPKEAEAFMKTLRSKKKWVTDYEEA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D +L E A E + + D + +E +F ++LS E D L++ Sbjct: 70 QTFVEDLEVLYEFAKEGEAPE--ENVQDRYDKAAAFIEDIEFRNMLSEEGDELSCVLQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML+RMY +AEK+ +K + L +G+ AGIK+ +L I+G A+GWLK Sbjct: 128 AGAGGTESCDWAAMLMRMYLMYAEKQGWKVKELNFQEGDVAGIKTVSLEIEGDFAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIEI+ +D I T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINPADYDIVTARSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+ + C RSQH N+A+A MLR++LYELEL+K+ E N E+ Sbjct: 248 VNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQMLRSQLYELELRKQMEARNAIEAD 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K I WG QIR+YVL PY++VKD+RT +E + VLDG++D F+K L + Sbjct: 308 KKAIEWGSQIRNYVLHPYKLVKDVRTAVETGNTDAVLDGNIDLFLKGYLMM 358 >gi|319898909|ref|YP_004159002.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73] gi|319402873|emb|CBI76424.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73] Length = 333 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 213/320 (66%), Positives = 263/320 (82%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 LW N +A+ +MRERQ+L+N+++ + L + + L+ + EE+D I+ E + + + Sbjct: 2 LWNNAQKAQDVMRERQNLENSMNSTQLFTQTLEECIELIAMGEEENDMGIIAEAENTILQ 61 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +K E++ ++ E LLSGEADSND YLE+HAGAGG ESQDWA+MLLRMY+RWAE+ K K E Sbjct: 62 LKKEIDKRRIEMLLSGEADSNDTYLEIHAGAGGIESQDWASMLLRMYSRWAEQNKMKVEV 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE HDGEEAGIKSATLLIKG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIW+YPV Sbjct: 122 LETHDGEEAGIKSATLLIKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWIYPV 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 V+++IE+++S++D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A Sbjct: 182 VNENIEVDLSDADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 AW+MLRA+LYE EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301 Query: 335 PSDVLDGDLDDFMKATLAIK 354 P VL+GDLD F++A LA + Sbjct: 302 PQTVLNGDLDIFIEAALAQR 321 >gi|153956213|ref|YP_001396978.1| peptide chain release factor 2 [Clostridium kluyveri DSM 555] gi|219856538|ref|YP_002473660.1| hypothetical protein CKR_3195 [Clostridium kluyveri NBRC 12016] gi|146349071|gb|EDK35607.1| PrfB [Clostridium kluyveri DSM 555] gi|219570262|dbj|BAH08246.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 328 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ A+ + E ++L+ ++ + + D ILLE+ EE+D QE Sbjct: 1 MQEPNFWNDIDNAQKIASEEKNLEGRLNRYDLLSHNIEDARILLEIIKEEEDSMSFQEVM 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ I+ +VE + E LL GE D N+A L +H G GGT++QDW MLLRMY RWAEK Sbjct: 61 KDIKDIEFQVEIFRTEILLCGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYIRWAEKMG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K +++ + E+AGIKS +L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 121 YKVNIIDMLEAEDAGIKSVSLSIIGEFAYGYLKSEKGIHRLVRISPFNANGKRQTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 181 EVLPELTGDQDIEIRSEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK QA +L+AKL EL+ + ++ ++GWG QIRSYV PY +VKD RT Sbjct: 241 HYNKEQALKILKAKLVELKERAHKDRIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E ++ S V+DGD+D+F+K L + Sbjct: 301 VESSNVSSVMDGDIDNFIKGYLKQQ 325 >gi|227546362|ref|ZP_03976411.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|317482557|ref|ZP_07941572.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA] gi|227213343|gb|EEI81215.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|316915979|gb|EFV37386.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA] Length = 374 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L T+ P LW + A+ + ++ + + Sbjct: 12 EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGHEEGDQDSLDEAQGEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD++ F++A + + Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363 >gi|302190497|ref|ZP_07266751.1| peptide chain release factor 2 [Lactobacillus iners AB-1] Length = 332 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 145/324 (44%), Positives = 205/324 (63%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 D W + A+ ++ ++ + + + L D +EL E + +L E + Sbjct: 1 MADDTFWNDQTNAQKIIEATNYMREKVDKYQTLSSALADAKTAVELYNMEPENDMLMEIT 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++++K E + LLSG+ D ++A LE+H+GAGGTE+ DWANML RMY RW + Sbjct: 61 AEVEKLKNEFNNYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWANMLFRMYQRWCDSHN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 E + G+EAG+KS ++ ++G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SI IEI+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDKSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A +MLRAKL++LE K+ + + ++ EI +G QIRSYV PY MVKD RT+ Sbjct: 241 FQNRETAMDMLRAKLFKLEEDKKRKQTEALKGNQKEINFGSQIRSYVFHPYNMVKDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V++G+LD F+ A L Sbjct: 301 YETSDTIGVMNGNLDPFIYAYLQW 324 >gi|322688633|ref|YP_004208367.1| peptide chain release factor [Bifidobacterium longum subsp. infantis 157F] gi|320459969|dbj|BAJ70589.1| peptide chain release factor [Bifidobacterium longum subsp. infantis 157F] Length = 374 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L T+ P LW + A+ + ++ + + Sbjct: 12 EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGREEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD++ F++A + + Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363 >gi|322411427|gb|EFY02335.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 327 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 207/325 (63%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + W + I A+ ++ L + +Q+ + + LE+ E+D S+ + Sbjct: 1 MTESDFWNDNIAAQKTSQKLNELKSTYETFHNMQELSDETELYLEML--EEDDSVKDDLE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+ + + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 59 ASLETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ N + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD++ F+ A L + Sbjct: 299 YEVAQVDKVMDGDIEGFIDAYLKWR 323 >gi|41409273|ref|NP_962109.1| peptide chain release factor 2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398093|gb|AAS05723.1| PrfB [Mycobacterium avium subsp. paratuberculosis K-10] Length = 373 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 156/354 (44%), Positives = 217/354 (61%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + E H + I+E+ Sbjct: 15 LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120 + RL D +L ELA E+ + + + + ++ ++E + +LLSGE D +A + Sbjct: 75 RARLDDLPVLYELAAEDGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 134 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 135 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 194 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GG Sbjct: 195 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 254 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E + + + + Sbjct: 255 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDALK 314 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 315 GEGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 367 >gi|15836107|ref|NP_300631.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138] gi|8978947|dbj|BAA98782.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138] Length = 350 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 161/344 (46%), Positives = 224/344 (65%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + GLFD D + L L ++ + + WQ+ + A + + L I +E++ ++ Sbjct: 1 MRGLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEYQELKSKIDAI 60 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE A +D +I ++ + ++ + + LLSGEAD N +L ++AGAGGTE Sbjct: 61 EFFLEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTE 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S DW ML RMY+RWA K ++ E ++ DGE GIK T+ G AYG+ K E+GVHR Sbjct: 121 SCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHR 180 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DSN +RHTSF+S+ V+P +DD I+IEI +D RIDT+R+SGAGGQHVN T+SA Sbjct: 181 LVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESA 240 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+P+GVVV CQ ERSQ +N+ ML+AKLY+ LQ+R E ++ K EI WG Sbjct: 241 VRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWG 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 QIR+YV QPY +VKD+RT E + +LDG+ LD+F+KA LA Sbjct: 301 SQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 344 >gi|296446781|ref|ZP_06888719.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b] gi|296255656|gb|EFH02745.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b] Length = 322 Score = 346 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 202/309 (65%), Positives = 248/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER +++ + I ++ L D L L+EL E+D +E L+ + + +Q E Sbjct: 1 MRERTQIEDQLGAIARLERDLDDALTLVELGESENDADTEKEGIAQLEALLKDARERQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +L SGEAD ND Y+EVH+GAGGTES DWA ML RMY RWAE++KFK E +E G+EAGI Sbjct: 61 ALFSGEADGNDTYIEVHSGAGGTESCDWARMLFRMYARWAERKKFKVEVIEETSGDEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD I+I+++E Sbjct: 121 KSATLLIKGMNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDKIDIQVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPSGIVVACQAERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KRE AN E+SKT+IGWG QIRSYVLQPYQ+VKDLRT +PS+VLDG+LDD Sbjct: 241 EMELKKREAEANAVEASKTDIGWGHQIRSYVLQPYQLVKDLRTGHTSGTPSEVLDGELDD 300 Query: 346 FMKATLAIK 354 FM+A+LA + Sbjct: 301 FMQASLAQR 309 >gi|256824891|ref|YP_003148851.1| peptide chain release factor 2 [Kytococcus sedentarius DSM 20547] gi|256688284|gb|ACV06086.1| bacterial peptide chain release factor 2 (bRF-2) [Kytococcus sedentarius DSM 20547] Length = 370 Score = 346 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 144/354 (40%), Positives = 215/354 (60%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + D ++L+ L ++ P LW + + + + + I+ Sbjct: 11 ELRTTMESVREVIDLPRLKEQLADLEQQSSAPDLWDDPENGQKVSAAMSRVRGEVERIES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D +L+E+ EE D L E + L I+ VE + +LLSGE D +A + + Sbjct: 71 MDSRIDDLEVLVEMGTEEGDAETLAEATKELAAIQAAVEKLEVRTLLSGEYDEREAVITI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A ML+RMY RWAE+ ++ T+ L+ EEAG+KS T + P AYG L Sbjct: 131 RAGAGGVDAADFAEMLMRMYLRWAERHEYPTKVLDTSYAEEAGLKSVTFEVNVPYAYGNL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISPYD+ RR TSF+++ V PV++ + IEI E++ ++D +R+SG GGQ Sbjct: 191 VVEGGTHRLVRISPYDNQGRRQTSFAAVEVVPVIEQTDSIEIPENEIKVDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L+ + E + Sbjct: 251 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLL-LQRKAEEAAERKELA 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + K+ Sbjct: 310 GDIKASWGDQMRSYVLHPYQMVKDLRTEHEVGNTQSVFDGDIDGFIEAGIRWKR 363 >gi|34556562|ref|NP_906377.1| peptide chain release factor 2 [Wolinella succinogenes DSM 1740] gi|81833248|sp|Q7MAP4|RF2_WOLSU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|34482276|emb|CAE09277.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Wolinella succinogenes] Length = 368 Score = 346 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 175/350 (50%), Positives = 240/350 (68%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + + + + D+ RL + W + +A + +E++ L+ + +E Sbjct: 12 ELSTKRDNIAKIIKPDSIENRLGEIEALEHSEGFWNDATKAGEVQKEKRKLERILKKYEE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L E+A +++D L + ++ E++ + E +LSGE D ++A + + Sbjct: 72 ANQAINDAKELFEIATQDNDEETLGLLFEESGHLEKEIKSVEIEVMLSGEHDGSNAIITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA++L RMY RWAE+R FK E L+ +GEEAGIK A+ +IKG NAYG+L Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERRGFKVEVLDYQEGEEAGIKDASFIIKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+D+N++RHTSF+S+ V P VDD I+IEI E D R+DTYRASGAGGQ Sbjct: 192 KVENGIHRLVRISPFDANAKRHTSFTSVMVSPEVDDDIDIEIEEKDLRLDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL KR A Sbjct: 252 HVNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELAKR--SAEYDSM 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGDLD+ ++ L Sbjct: 310 EKSEIGWGHQIRSYVLAPYQQVKDTRSNIAYSNIEAILDGDLDELLEGVL 359 >gi|283783522|ref|YP_003374276.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05] gi|283441040|gb|ADB13506.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05] Length = 378 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 142/351 (40%), Positives = 212/351 (60%), Gaps = 1/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + + D D+ ++ L + +P LW + A+ + + + + ++ + Sbjct: 14 EAKYSSISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVD 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 R+ D L+EL EE D + E + L I E++ + ++LL GE D+ A + + + Sbjct: 74 QRIEDTKTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRS 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ D+A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+VRISP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ V Sbjct: 194 EGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L+ E + Sbjct: 254 NTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK-HAEEAAKKKELAGD 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363 >gi|163840102|ref|YP_001624507.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC 33209] gi|229470354|sp|A9WPT6|RF2_RENSM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|162953578|gb|ABY23093.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC 33209] Length = 374 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 146/352 (41%), Positives = 221/352 (62%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D D+ + ++ L+ + P LW N EA+ + + H + + ++ + Sbjct: 16 LRATYDSIERVIDADSLRKDIAVLSEQAGVPDLWDNPAEAQKVTSKLSHAQSKLERLETL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+ELA E D L E S L ++ ++ + +LL+GE D +A + + Sbjct: 76 TARIDDLEVLVELAESEHDEDSLAEASKELVSLQKSLQELEVVTLLAGEYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 136 SGAGGVDAADFAEMLLRMYLRWAERHGYPTSVLDTSYAEEAGLKSATFEVKAPYAFGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ++D R+D +R+SG GGQ Sbjct: 196 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNDIRVDVFRSSGPGGQS 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG VV Q E+SQ +N+A A +L+++L L+ ++E+ + Sbjct: 256 VNTTDSAVRLTHLPTGTVVSMQNEKSQLQNRAAATRVLQSRLLLLKK-QQEDAEKKALAG 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + S VLDGD+DDF+ A + + Sbjct: 315 DVKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSGVLDGDIDDFIDAGIRWR 366 >gi|28210088|ref|NP_781032.1| peptide chain release factor 2 [Clostridium tetani E88] gi|28202524|gb|AAO34969.1| bacterial peptide chain release factor 2 [Clostridium tetani E88] Length = 325 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 158/324 (48%), Positives = 223/324 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P W+++ A+ + ++ + + + + +++R+ D+L+L+EL EE+D S E Sbjct: 1 MQEPDFWEDIKRAQEVTQQEKLIKDRLEKFDSLENRIEDSLVLIELMKEEEDISSAGEVL 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L +K E+E + E LLSGE D N+A + +HAG GGT++QDW MLLRMYTRWAEK+ Sbjct: 61 KELVLLKKEIESFRIEVLLSGEYDRNNAIMTLHAGVGGTDAQDWTEMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K + L+ G+EAGIKS TL I G AYG+LK E+GVHR+VRISPY++N +R TSF+S+ Sbjct: 121 YKVDTLDFLPGDEAGIKSVTLKITGDFAYGYLKAEKGVHRIVRISPYNANGKRQTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + + +IEI + D ++DTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 181 ELIPELTEDQDIEIIDDDLKVDTYRASGAGGQHVNKTESAVRITHIPTGIVVQCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H N+ A ML+AKL EL+ + +E ++GWG QIRSYV PY +VKD RT+ Sbjct: 241 HSNRDTALKMLKAKLVELKEAEHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DGD+D F+ L Sbjct: 301 AETGNLTAVMDGDIDLFINEYLKA 324 >gi|332671116|ref|YP_004454124.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484] gi|332340154|gb|AEE46737.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484] Length = 382 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 144/354 (40%), Positives = 218/354 (61%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D +++ L+ + P+LW + A+ + + + + Sbjct: 24 ELRTTLESIQAVSDPTALKAKIALLSEQASVPNLWDDPDAAQKVTSALSATQAELDRVAK 83 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D L+EL +E +D L E L I+ ++ + +LL+GE D +A + + Sbjct: 84 LGGRIDDLETLVELGVEMEDEDSLAEAEVELTGIRKDLGELEVRTLLNGEYDQREAVVTI 143 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 144 RSGAGGVDAADFAEMLLRMYLRWAERHGYPTTVLDTSYAEEAGLKSATFEVKAPYAFGHL 203 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GGQ Sbjct: 204 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPESEIKVDVFRSSGPGGQ 263 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L + E+ + Sbjct: 264 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLL-LVRKAEEDAKKKELA 322 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E +PS V DGD+DDF++A + ++ Sbjct: 323 GDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRR 376 >gi|315187113|gb|EFU20870.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta thermophila DSM 6578] Length = 364 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 168/352 (47%), Positives = 230/352 (65%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R+ GG+F+ + +++S L +T P LW + A+ ++ + L + Sbjct: 1 MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60 Query: 63 QDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + D L +LA EE+D S +E L + + + LL+ E D DAYL Sbjct: 61 VQEVEDIHTLYDLAAEENDPSQEEEEEELRQQLAEAERKFRELRLRELLNEEYDQKDAYL 120 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 +HAGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG A+G Sbjct: 121 TIHAGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKGDYAFG 179 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LKGE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I D RIDTYR+ GAG Sbjct: 180 YLKGEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGAG 239 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T+SAVRITH+PTG+VVQCQ ERSQHKN+ A MLR++LYE Q REE Sbjct: 240 GQHVNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEKK 299 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV QPY MVKDLRT +E + V+DGDLD F++A L Sbjct: 300 AIEKKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYL 351 >gi|322389911|ref|ZP_08063451.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 903] gi|321143347|gb|EFX38785.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 903] Length = 336 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 151/336 (44%), Positives = 213/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + I A+ +E L ++ D ++ ILL+ E Sbjct: 1 MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D S+ +E + L+ + + + LLS D+N+A LE+H G+GGTE+QDW +MLL Sbjct: 61 --DDSVKEELIEKLEELDKRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DGD+D F+ A L + Sbjct: 299 PYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334 >gi|294102045|ref|YP_003553903.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM 12261] gi|293617025|gb|ADE57179.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM 12261] Length = 368 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 163/354 (46%), Positives = 219/354 (61%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L D ++ L KT P W EA+ + +E + + K+ Sbjct: 12 ELRSLKDELQESLDLPILEIKIQELEEKTLKPDFWG-SDEARKVTQELARYQDKLDSWKK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D I+ E+ EE+D + ++ +K E+E +Q LLS + D +A + V Sbjct: 71 IAEDYEDLEIIEEMLKEEEDRELQKDFEQKAFSLKKEIERQQLIELLSEDYDQGNAIVSV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GG +SQDWA ML RMY RW E+ F+ + L++ E GI + TLL++G AYG+L Sbjct: 131 HAGSGGLDSQDWAEMLYRMYARWMEQNDFRVKVLDLIKDSEGGISNVTLLVEGSYAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS RRHTSF+S+ + P + + +IEI D RIDTYR+SGAGGQ Sbjct: 191 KSEKGVHRLVRISPFDSAGRRHTSFASVDIVPELPEDEDIEIRTEDLRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH P+G+VV CQ ERSQH NKA A +L++KLYE +++R + Sbjct: 251 HVNMTDSAVRITHFPSGIVVSCQNERSQHMNKAVAMQVLKSKLYERAIEERRNEMDTIIG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K EI WG QIRSYVL PY +VKD RT E + VLDGD+DDF+ A L KK Sbjct: 311 EKKEISWGSQIRSYVLHPYTLVKDHRTGEETGNVQAVLDGDIDDFIMAYLRWKK 364 >gi|289642137|ref|ZP_06474289.1| peptide chain release factor 2 [Frankia symbiont of Datisca glomerata] gi|289508100|gb|EFD29047.1| peptide chain release factor 2 [Frankia symbiont of Datisca glomerata] Length = 366 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 219/353 (62%), Gaps = 4/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D +R + L + DP LW + A+ + R + IS ++ + Sbjct: 12 LDATLAGIEAVLDLDTLRRRAADLEREAADPQLWSDQDRAQAVTRRLSSVRGDISRVEAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D + AL+ D +L E +++L + ++ + +LLSGE D DA +++ Sbjct: 72 RRRLDDVIA----ALDLGDDDLLAEAANDLPTLARDISALEVRTLLSGEYDERDAIVQLS 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ DW MLLRMY RWAE+ + E + + EEAG+KSAT IK P AYG L+ Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYAAEVFDTSEAEEAGLKSATFQIKAPYAYGTLR 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S +EI + + RID +R+SG GGQ Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVEQSDHVEIDDKELRIDIFRSSGPGGQG 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 248 VNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRLTGG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++ +G QIR+YVL PYQMVKDLRT +E + + VLDGD+D+F+ A + ++ Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSGTAAVLDGDIDEFIDAEIRWRR 360 >gi|297181318|gb|ADI17509.1| protein chain release factor b [uncultured bacterium HF0130_06E03] Length = 325 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 154/325 (47%), Positives = 212/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + A+ + ++ + +I + + + D L E+A + D S L + Sbjct: 1 MSDPSFWSDRKNAEKISKQARLFKESIEAWETLTSQHKDLCELQEMAAADGDESALSDLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + VE +F S+L G DS +A L +H+GAGGTE+ DWA MLLRMY RW E+ Sbjct: 61 NEVDELTKNVESFEFRSMLDGVDDSKNAILVIHSGAGGTEAADWAEMLLRMYNRWTERNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K++ ++I GEEAGIK T+ + G AYG+LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKSKVMDIQPGEEAGIKGVTIEVSGEYAYGYLKAEAGVHRLVRISPFDSGGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +VYP VDD IE+++ + D +I+ YRA GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQ Sbjct: 181 FVYPDVDDDIEVDLKDEDLKIEVYRAGGAGGQHVNKTSSAVRITHVPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KNKA A +L A++Y+ + + E+SK I +G QIRSYV PY +VKD RTN Sbjct: 241 FKNKATALKVLTARVYQNIKDEENKKLKEVENSKKSIDFGSQIRSYVFHPYNLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F++A L ++ Sbjct: 301 YETGNVQAVMDGDIDKFIRAFLTLE 325 >gi|281357586|ref|ZP_06244073.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548] gi|281315843|gb|EFA99869.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548] Length = 364 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 184/354 (51%), Positives = 241/354 (68%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ L ++ ++ L K P W N A+ + + N + ++ Sbjct: 13 ELKGRIGHLEEFLHIEDRKAEMAELEQKMSAPDFWDNKESAQNTVAQLSACRNLLEPFRK 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D +ELA E D LQET + +R+ ++ + S LSG+ D ++ Y V Sbjct: 73 LQSEVEDYSASVELAAE--DEEFLQETEISYRRLLKSLDRMEIMSFLSGKFDRSNLYFSV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWANMLLRMY R+ E+R +K E +++ GEEAG+KSATL + G AYG++ Sbjct: 131 HAGAGGTESCDWANMLLRMYRRYFERRGWKDEVIDLQPGEEAGVKSATLHVTGEFAYGYM 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE+GVHRLVRISP+DSN+RRHTSF S+ V+P +DD IEIEI ES RIDTYR+SGAGGQ Sbjct: 191 KGEKGVHRLVRISPFDSNARRHTSFVSVDVFPELDDDIEIEIDESQLRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSA+RITH+PTG+VV CQ ERSQHKN+A A ML+AKLYE E +KR A+ Sbjct: 251 HVNTTDSAIRITHLPTGIVVCCQNERSQHKNRATAMKMLKAKLYEFEEEKRRNEADAIRG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K E GWG QIRSYVLQPYQMVKDLRT +E + + VLDGD+D+F++A L + Sbjct: 311 EKAENGWGSQIRSYVLQPYQMVKDLRTEVETSDTAGVLDGDIDEFIEAYLKSAR 364 >gi|327398507|ref|YP_004339376.1| peptide chain release factor 2 [Hippea maritima DSM 10411] gi|327181136|gb|AEA33317.1| peptide chain release factor 2 [Hippea maritima DSM 10411] Length = 359 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 166/354 (46%), Positives = 238/354 (67%), Gaps = 4/354 (1%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L+ ++N + D + L + + ED +W + + L R++ ++ + ++ Sbjct: 6 IQLADKINKIKEYLDPPKRKKELDDIQKQLEDSSVWNDYQLLQNLKRKQSSIEQKLKTVE 65 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+++ + L L E EDD S QE DN++ + +VE + E+ LSGE D ++A + Sbjct: 66 ELENDVDTLLELSEFV--EDDESYKQELEDNIKELTKKVEKAETETFLSGEHDFSNAIVT 123 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H+GAGGTES DW +ML RMY+ W + ++K E +++ G+EAG KS T L+ G AYG+ Sbjct: 124 IHSGAGGTESCDWVSMLFRMYSMWCDNNEYKIEVMDLQPGDEAGYKSITFLVSGEKAYGY 183 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+D+N RRHTSF+S+ V P ++D EI+I D +IDT+RASGAGG Sbjct: 184 LKNENGVHRLVRISPFDANKRRHTSFASVSVLPEINDDTEIDIDPKDLKIDTFRASGAGG 243 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN TDSA+RITHIPTG+VV CQ ERSQHKNKA A +L+AKLY+LE +K+++ E Sbjct: 244 QHVNKTDSAIRITHIPTGIVVSCQNERSQHKNKAFALKILKAKLYQLEEEKKKKELEKLE 303 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS--DVLDGDLDDFMKATLA 352 K +I WG QIRSYVL PY+MVKD RT +EK + VL+G++DDF++ L Sbjct: 304 GEKKKIEWGSQIRSYVLHPYKMVKDHRTGVEKKDVAALAVLNGEIDDFIREALK 357 >gi|298252599|ref|ZP_06976393.1| protein chain release factor B [Gardnerella vaginalis 5-1] gi|297532963|gb|EFH71847.1| protein chain release factor B [Gardnerella vaginalis 5-1] Length = 378 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 142/351 (40%), Positives = 212/351 (60%), Gaps = 1/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + + D D+ ++ L + +P LW + A+ + + + + ++ + Sbjct: 14 EAKYSSISKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVD 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 R+ D L+EL EE D + E + L I E++ + ++LL GE D+ A + + + Sbjct: 74 QRIEDTKTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRS 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ D+A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+VRISP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ V Sbjct: 194 EGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L+ E + Sbjct: 254 NTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK-HAEEAAKKKELAGD 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363 >gi|291456213|ref|ZP_06595603.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213] gi|291381490|gb|EFE89008.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213] Length = 374 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 138/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + + D D + L + P LW N A+ + + ++ + + Sbjct: 12 EARAKYDSIAKALDVDRLKADIKDLEAQAAAPGLWDNPDNAQKITSKLSAAESQLKRLTS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGQEEQDQESLDEAQNEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + ++I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHVDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+++F++A + + Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINNFIEAGIRWR 363 >gi|317968157|ref|ZP_07969547.1| peptide chain release factor 2 [Synechococcus sp. CB0205] Length = 356 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 143/341 (41%), Positives = 207/341 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR+ + + + + + + D Sbjct: 3 RTVFDVAALKARQQDLEQLASQPDFWDDQKLAQSKMRQLDEVKAQLEQLSQWKGAVADAE 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +E+ E D +L E+ L++++ +++ + E LLSG D A + ++AGAGGT++ Sbjct: 63 ATVEIYGLEPDDELLSESDAALKKLRADLDRWELERLLSGTYDKEGAVISINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML+RMYTRWAE K E+ DGEEAGIKS T+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSDGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRT E T V+DGDLD F+++ L Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343 >gi|325066934|ref|ZP_08125607.1| peptide chain release factor 2 [Actinomyces oris K20] Length = 373 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 147/357 (41%), Positives = 217/357 (60%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D ++ELA EE+ IL E +L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGEDAAEILAEAETDLAAISKDLSDLEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ + + L EEAG+KS T + P AY Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L+ + E+ Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQ-QEEDAKKK 309 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVL PYQMVKDLRTN E +P V DGD+D F+ A + +K Sbjct: 310 ELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|23465750|ref|NP_696353.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705] gi|189439805|ref|YP_001954886.1| peptide chain release factor 2 [Bifidobacterium longum DJO10A] gi|239622364|ref|ZP_04665395.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296453666|ref|YP_003660809.1| peptide chain release factor 2 [Bifidobacterium longum subsp. longum JDM301] gi|312133211|ref|YP_004000550.1| prfb [Bifidobacterium longum subsp. longum BBMN68] gi|322690619|ref|YP_004220189.1| peptide chain release factor [Bifidobacterium longum subsp. longum JCM 1217] gi|23326435|gb|AAN24989.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705] gi|189428240|gb|ACD98388.1| Protein chain release factor B [Bifidobacterium longum DJO10A] gi|239514361|gb|EEQ54228.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291517272|emb|CBK70888.1| bacterial peptide chain release factor 2 (bRF-2) [Bifidobacterium longum subsp. longum F8] gi|296183097|gb|ADG99978.1| peptide chain release factor 2 [Bifidobacterium longum subsp. longum JDM301] gi|311772412|gb|ADQ01900.1| PrfB [Bifidobacterium longum subsp. longum BBMN68] gi|320455475|dbj|BAJ66097.1| peptide chain release factor [Bifidobacterium longum subsp. longum JCM 1217] Length = 374 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L T+ P LW + A+ + ++ + + Sbjct: 12 EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD++ F++A + + Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363 >gi|146319066|ref|YP_001198778.1| peptide chain release factor 2 [Streptococcus suis 05ZYH33] gi|146321272|ref|YP_001200983.1| peptide chain release factor 2 [Streptococcus suis 98HAH33] gi|145689872|gb|ABP90378.1| Protein chain release factor B [Streptococcus suis 05ZYH33] gi|145692078|gb|ABP92583.1| Protein chain release factor B [Streptococcus suis 98HAH33] gi|292558711|gb|ADE31712.1| Peptide chain release factor 2 [Streptococcus suis GZ1] gi|319758505|gb|ADV70447.1| peptide chain release factor 2 [Streptococcus suis JS14] Length = 325 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + + A+ +E L N ++ D ++ ILL+ E D S+ E Sbjct: 1 MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAE--DESVRDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW MLLRMY R+ + Sbjct: 59 EKLVELDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ G+EAGIKS TL GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + + ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q Sbjct: 179 EVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A +L+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT Sbjct: 239 YGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|76798117|ref|ZP_00780371.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21] gi|77405443|ref|ZP_00782536.1| peptide chain release factor 2 [Streptococcus agalactiae H36B] gi|77408934|ref|ZP_00785658.1| peptide chain release factor 2 [Streptococcus agalactiae COH1] gi|77411593|ref|ZP_00787935.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111] gi|209559087|ref|YP_002285559.1| peptide chain release factor 2 [Streptococcus pyogenes NZ131] gi|76586525|gb|EAO63029.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21] gi|77162378|gb|EAO73347.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111] gi|77172476|gb|EAO75621.1| peptide chain release factor 2 [Streptococcus agalactiae COH1] gi|77175936|gb|EAO78712.1| peptide chain release factor 2 [Streptococcus agalactiae H36B] gi|209540288|gb|ACI60864.1| Peptide chain release factor 2 [Streptococcus pyogenes NZ131] Length = 326 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +Q+ + +LLE+ ++D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML--DEDDSLKEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LLRMYTR+ Sbjct: 59 ENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG+++ F+ A L + Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323 >gi|116671212|ref|YP_832145.1| peptide chain release factor 2 [Arthrobacter sp. FB24] gi|229576665|sp|A0JYC5|RF2_ARTS2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116611321|gb|ABK04045.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter sp. FB24] Length = 371 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 139/352 (39%), Positives = 219/352 (62%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + + ++ L+ + +P+LW + A+ + H + + + + Sbjct: 13 LRATYSSIENVSNVEELKEDIAELSERAGEPNLWDDPAAAQKITSRLSHRQSELERLNTL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+EL +EDD + E + L+ I+ ++ + +LLSGE D +A + + Sbjct: 73 VSRIDDLEVLVELGQDEDDADSMGEAAAELESIRKSLKDLEVVTLLSGEFDEREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + T ++ EEAG+KSAT + P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTTIMDTSYAEEAGLKSATFEVNAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I +++ R+D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG VV Q E+SQ +N+A A +L+++L L+ ++E+ + Sbjct: 253 VNTTDSAVRLTHIPTGTVVSMQNEKSQLQNRAAALRVLQSRLLLLKK-EQEDAEKKAFAG 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + S V DG++DDF+ A + + Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363 >gi|154507630|ref|ZP_02043272.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC 17982] gi|153797264|gb|EDN79684.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC 17982] Length = 373 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 142/355 (40%), Positives = 220/355 (61%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D +++ LN K P LW + A+ + H + + I ++ Sbjct: 12 LRTTMENIIAVVQPDKLREQIVELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQM 71 Query: 63 QDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +R+ D ++++A E+ D IL E +L++++ ++ + +LL GE D +A + Sbjct: 72 SERIDDLEAMVDMAAEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ D+A +LLRMY RWAE+ + T+ ++ EEAG+KSAT ++ P AYG Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GG Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L + E+ Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVL-RHEEEQAKKKEL 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 311 AGDVKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365 >gi|305679674|ref|ZP_07402484.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC 14266] gi|305660294|gb|EFM49791.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC 14266] Length = 368 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 220/353 (62%), Gaps = 3/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + + + R L K DP LW + A+ + E + + ++ + Sbjct: 12 LDTTLTSIEKVMNPADLSDRARELAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D I+ ELA EE + + + + L ++ +++ + ++LSGE DS +A + + Sbjct: 72 RSRLTDLPIMYELAEEEGEGTDI--ADEELTDLRADIDALEVTTMLSGEYDSREALINIR 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK+ K E +I EEAGIKSAT ++ G YG L Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRLVRISP+D+ +RR TSF+ + V PVV+ + I+I +S+ R+D YR+SG GGQ Sbjct: 190 VEQGVHRLVRISPFDNQARRQTSFAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQS 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E + Sbjct: 250 VNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASALRVLQAKLLERKR-QEERAELDALGA 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+R+YVL P+QMVKDLRT E P VLDGDLD F++A + +K Sbjct: 309 GGNASWGNQMRNYVLHPFQMVKDLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361 >gi|57241933|ref|ZP_00369873.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195] gi|57017125|gb|EAL53906.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195] Length = 368 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 233/353 (66%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ + + + +LS + + DP+ W N A +L +E+ + N + + Sbjct: 13 LEQKVKNIASIIKPNELRVKLSEIEMQENDPNFWNNAKNAAVLGKEKTKITNLLKAYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ++A E+D L+ ++ +++ + + LLSGE D+ +A + +H Sbjct: 73 FNALNDANELFDMANSENDDETLKALFEDAPKLEDNITSLEISMLLSGENDNKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +VVQCQ +RSQHKNKA A+ MLR++LYELEL K+E +AN Sbjct: 253 VNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAVAN--SGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+E+GWG QIRSYVL PYQ VKD R+N ++ +LDGD+ ++ L K Sbjct: 311 KSEMGWGHQIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363 >gi|146340475|ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobium sp. ORS278] gi|146193281|emb|CAL77297.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS278] Length = 323 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 200/309 (64%), Positives = 249/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L DN+ ++EL E+D ++ E + L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELSDNIEMIELGEAENDAGVVAEAENALKELKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMYTRWAE FK E LE GEEAGI Sbjct: 61 ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEYLEESLGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+DDSI+I+I E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + S VL+GDLD+ Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|220913146|ref|YP_002488455.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6] gi|254790908|sp|B8HBH8|RF2_ARTCA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|219860024|gb|ACL40366.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6] Length = 371 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 139/352 (39%), Positives = 218/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + D + + ++ L+ + +P LW + A+ + H + + + + Sbjct: 13 LRATYESIERVTDMEALREDIAELSERAGEPDLWDDPAAAQKITSRLSHRQSELERLTTL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+EL +E D + E + L+ I+ ++ + +LLSGE D +A + + Sbjct: 73 ASRIDDLEVLVELGQDEGDADSMGEAAAELESIQKALKNLEVVTLLSGEYDEREAVVSIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T ++ EEAG+KSAT +K P A+G L Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I +++ R+D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTGVVV Q E+SQ +N+A A +L+++L L+ ++E+ + Sbjct: 253 VNTTDSAVRLTHIPTGVVVSMQNEKSQLQNRAAAMRVLQSRLLLLKK-EQEDAEKKALAG 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + S V DG++DDF+ A + + Sbjct: 312 DVKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363 >gi|77413702|ref|ZP_00789885.1| peptide chain release factor 2 [Streptococcus agalactiae 515] gi|77160247|gb|EAO71375.1| peptide chain release factor 2 [Streptococcus agalactiae 515] Length = 326 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +Q+ + +LLE+ ++D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML--DEDDSLKEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LLRMYTR+ Sbjct: 59 ENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEVRDYDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG+++ F+ A L + Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323 >gi|308176991|ref|YP_003916397.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117] gi|307744454|emb|CBT75426.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117] Length = 371 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 148/352 (42%), Positives = 219/352 (62%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D D ++ L+ + P+LW + A+++ + H + + + + Sbjct: 13 LRSTFSAIEDVSDVDQIKADIAVLSEEAGVPNLWDDPAAAQIVTSKLSHRQSELERLTRL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L+ELA EDD L E L I+ + + +LLSGE DS A + + Sbjct: 73 RTRIDDLEVLVELAELEDDADTLDEAEKELVSIQKSLADLEIVTLLSGEFDSRGAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE+R +K ++ EEAG+KSAT I P A+G L Sbjct: 133 SGAGGVDAADFAEMLLRMYLRWAERRGYKATVMDTSYAEEAGLKSATFEIDAPYAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ R+D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDTIEIPESEIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTGVVV Q E+SQ +N+A A +L+++L L+ ++E+ + Sbjct: 253 VNTTDSAVRMTHIPTGVVVSMQNEKSQIQNRAAALRVLQSRLLLLKK-EQEDAQKKEFAG 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + VLDG++DDF+ A + + Sbjct: 312 DVKATWGDQMRSYVLNPYQMVKDLRTEHEVGNTQAVLDGEIDDFIDAGIRWR 363 >gi|227889611|ref|ZP_04007416.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC 33200] gi|268319827|ref|YP_003293483.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785] gi|227849754|gb|EEJ59840.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC 33200] gi|262398202|emb|CAX67216.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785] Length = 332 Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 150/324 (46%), Positives = 209/324 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ + + K+++ + D LEL + D + +E S Sbjct: 1 MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A Sbjct: 61 EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHD 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NMLRAKL++LE +K+ + + ++ EIG+G QIRSYV PY MVKD RTN Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DG LD+F+ A L Sbjct: 301 FETSDVNGVMDGKLDNFIYAYLQW 324 >gi|313891989|ref|ZP_07825590.1| peptide chain release factor 2 [Dialister microaerophilus UPII 345-E] gi|313119632|gb|EFR42823.1| peptide chain release factor 2 [Dialister microaerophilus UPII 345-E] Length = 342 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 153/338 (45%), Positives = 219/338 (64%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + + + + DP W + +A+ + ++ +A ++ +R LL++A Sbjct: 2 PRLKETIRSYDIQMSDPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMA 61 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 +EEDD + + ++ + + K+ E LL+ E D+N+A + HAGAGGTE+QDW M Sbjct: 62 IEEDDQGMEGDLKQEIEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEM 121 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L+RMY +WAE + E L + G+EAGIKSA +IKG AYG LK E+GVHRLVRISP+ Sbjct: 122 LIRMYIKWAESEGYGIEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPF 181 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 D+ RRHTSFS++ V P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+P Sbjct: 182 DAAKRRHTSFSAVDVMPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLP 241 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TG+V CQ ERSQ +NK Q +LRAKL+ELE++K E++ + + I WG QIRSYV Sbjct: 242 TGIVAACQNERSQTQNKEQCLRILRAKLFELEMKKHEQLKKNIQGEQQAIEWGSQIRSYV 301 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QPY +VKD RT +E + V+DGDL+ F++ L K Sbjct: 302 FQPYTLVKDNRTGVETGNVQAVMDGDLNPFIEGFLKSK 339 >gi|42562784|ref|NP_176032.2| peptide chain release factor, putative [Arabidopsis thaliana] gi|332195261|gb|AEE33382.1| Peptide chain release factor 2 [Arabidopsis thaliana] Length = 482 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 158/351 (45%), Positives = 223/351 (63%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W + RL L+ + LW + A + RE L + + Sbjct: 122 IAQSIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF 181 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L+LA EE+D + ET L ++ + K+ E+LLS + D Y+EV Sbjct: 182 ERELLEHIDMLKLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQ 241 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++ MY WA++RKF ++ GE AGIK AT+ + G AYG+ K Sbjct: 242 AGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAK 301 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P++ D S +EI++SD RI+ +R+ GAGGQ Sbjct: 302 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQ 361 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTTDSAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ + Sbjct: 362 HANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 421 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S TEI WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 422 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 472 >gi|310659612|ref|YP_003937333.1| prfb [Clostridium sticklandii DSM 519] gi|308826390|emb|CBH22428.1| PrfB [Clostridium sticklandii] Length = 328 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 153/323 (47%), Positives = 220/323 (68%), Gaps = 2/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W V +A+ M++ + +++ + ++ L D +L ELA ++D S+ +E Sbjct: 1 MSEPEFWNEVEKAQQTMQKNKVIEDKLEQFASLESELEDAFVLFELA--DEDASLEKELH 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ +++ + +LLSG+ D N+A + +HAG+GG ++QDW MLLRMY R+A+ Sbjct: 59 SALNSLEEKIDELKIATLLSGQYDMNNAIVSIHAGSGGLDAQDWTKMLLRMYDRFAQSMG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ L++ EAGIKS TL I+G NAYG+LK E+GVHR+VRISP+D++ +RHTSF+S+ Sbjct: 119 FRVIELDMIADPEAGIKSVTLKIEGANAYGYLKSEKGVHRIVRISPFDTSGKRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSIEI+I+ +D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ +RSQ Sbjct: 179 DVIPELDDSIEIDINPADLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQNQRSQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A ML AKL EL+ + ++ + ++I WG QIRSYV QPY MVKD RTN Sbjct: 239 HSNKETAMKMLMAKLIELKELEHKDKIEDLQGEYSQISWGSQIRSYVFQPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E V+DG++ F+ A L Sbjct: 299 TEIGHVQSVMDGNIMPFINAYLK 321 >gi|125543555|gb|EAY89694.1| hypothetical protein OsI_11230 [Oryza sativa Indica Group] Length = 468 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 155/345 (44%), Positives = 220/345 (63%), Gaps = 1/345 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ + + W ++R L+ E P LW + + A + RE L I + + + Sbjct: 112 AQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFE 171 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L +++ +L LA EEDD + ET L ++ + K+ +LLSG+ DS ++EV A Sbjct: 172 QELMEHIDMLRLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQA 231 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA M++ MY+ WA++R + +E GE AGIK AT+ + G A+G+ K Sbjct: 232 GAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKA 291 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+++ V P++ D S +I +SD RI+ +R+ G GGQH Sbjct: 292 EVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQH 351 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 N T+SAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ ++ S Sbjct: 352 ANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQS 411 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +EI WG QIRSYVL PY+MVKDLRTN E + P VL+GDLDDF+ Sbjct: 412 LSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 456 >gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 369 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 160/354 (45%), Positives = 229/354 (64%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G D DN + + +T + W + +A+ +M + + Sbjct: 13 ELDKNLKMIGAHLDPDNLFVEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFIN 72 Query: 62 IQDRLCDNLILLELALEEDDC-SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +++ L D L+++ E ++ L + ++L +K E+ + ++ L GE D N+AY+ Sbjct: 73 LKEELKDQSDLIDIIEETNEELDSLVDVENSLNMLKKEISSFKIKTELDGEYDRNNAYMV 132 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +HAGAGG E+ DWA ML+RMYTR+ E+R FK + ++++ E GIKSAT+ IKG AYG+ Sbjct: 133 IHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAYGY 192 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI D RIDTYRASGAGG Sbjct: 193 LKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGAGG 252 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN TDSAVRITHIPTGV+ Q ERSQ +NK A +L AKL +++ ++ E + Sbjct: 253 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQ 312 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + T+I WG QIRSYV PY +VKD RTN E + V+DGD+D F+ A LA K Sbjct: 313 GNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 366 >gi|148243347|ref|YP_001228504.1| peptide chain release factor 2 [Synechococcus sp. RCC307] gi|147851657|emb|CAK29151.1| Protein chain release factor B [Synechococcus sp. RCC307] Length = 349 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 144/338 (42%), Positives = 209/338 (61%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D R L P W + A+ MR+ + + ++ + + D LE Sbjct: 1 DVPALTARQQDLEQLAAQPDFWDDQNNARKQMRQLDDVKAQLEQLRTWRASVDDAAATLE 60 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L E D ++L+E + LQ ++L ++ + E LLSG D A + ++AGAGGT++QDWA Sbjct: 61 LYDLEPDDALLEEANGGLQELRLALDRWELERLLSGTYDQEGAVISINAGAGGTDAQDWA 120 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML+RMYTRWAE R K E+ +GEEAGIKS T+ ++G AYG+L+ E+G HRLVRIS Sbjct: 121 LMLMRMYTRWAEDRGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVRIS 180 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++N +R TSF+ + V P +++ +++EI + D + T R+ GAGGQ+VN ++AVRI H Sbjct: 181 PFNANDKRQTSFAGVEVMPKLEEEVDLEIPDKDLEVTTSRSGGAGGQNVNKVETAVRILH 240 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG+ V+C QERSQ +NK +A +L++KL + ++R E WG QIR+ Sbjct: 241 IPTGLAVRCTQERSQLQNKEKAMALLKSKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRN 300 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 YV PYQMVKDLRTN E T V+DGDLD F+++ L Sbjct: 301 YVFHPYQMVKDLRTNEETTDVQGVMDGDLDPFIQSLLR 338 >gi|289523219|ref|ZP_06440073.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503762|gb|EFD24926.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 355 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 167/345 (48%), Positives = 229/345 (66%), Gaps = 1/345 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G +FD D + L KT P W + A+ + ++ HL + + ++++ + Sbjct: 4 GKVFDVDTLESEIKALIDKTSSPDFWNSSD-AQKVTQKLSHLQDLLGQWQKMKAEWEELE 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L EL E +D ++ E D R++ E+ + E LL E D ++A L VHAGAGG ++ Sbjct: 63 VLTELLNETEDEELIGEFYDKASRLRKEINSMEMELLLDEEYDESNAILTVHAGAGGLDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RWAE+ ++T+ ++I EEAGIK AT+LIKG +YG+LK E+G+HRL Sbjct: 123 QDWAEMLLRMYLRWAERHNYETKVIDILPDEEAGIKYATILIKGICSYGYLKAEKGIHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS+ RRHTSF+SI V P + D +IEI + R++T+RASGAGGQ+VN TDSAV Sbjct: 183 VRISPFDSSKRRHTSFASIEVIPELPDDADIEIRPEEIRMETFRASGAGGQYVNMTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+ HIPTG+VV CQ ERSQH N+ A +L+AKLYE Q+++++ + K EIGWG Sbjct: 243 RLIHIPTGIVVTCQNERSQHMNRQVAMQLLKAKLYERRQQEKQKMLDDLHGEKKEIGWGS 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYVL PY MVKD RT S VLDGD+DDF+ A L ++K Sbjct: 303 QIRSYVLHPYTMVKDHRTGYTSYSVDAVLDGDIDDFVIAYLRMRK 347 >gi|322435983|ref|YP_004218195.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9] gi|321163710|gb|ADW69415.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9] Length = 375 Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 231/352 (65%), Gaps = 2/352 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ L D + L+ + K DP +W + ++ LMR+R+ L+ ++ E+ Sbjct: 13 RDKVRELREYLDSSRLRRELAIVEEKIADPTVWADAARSQPLMRDRKRLETLLADDAELA 72 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 R D ELA E +D + + + + + +++LSGE D +A + VH Sbjct: 73 RRSDDIEAYFELAKEGEDTE--PDLVREIPALVEYADQLESKTMLSGETDLLNAIVTVHP 130 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDWA ML+RMY RW E+++FK E EI DG+EAGIKSAT I G A+G L G Sbjct: 131 GAGGTESQDWAEMLMRMYIRWGERQRFKVEINEIQDGDEAGIKSATFTISGEFAFGLLSG 190 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+DS RRHTSF+S++V P +DD+I I+I D RIDTYR+ G GGQHV Sbjct: 191 ETGVHRLVRISPFDSAKRRHTSFASVFVSPEIDDTIVIDIKVEDLRIDTYRSGGKGGQHV 250 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PTG+V CQ ERSQHKNK +A M+R+KLYE EL K++ E SK Sbjct: 251 NTTDSAVRITHLPTGLVTGCQNERSQHKNKERAMKMMRSKLYEYELDKKKAATRKIEDSK 310 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 EIG+G QIRSYVLQPY+M KDLRT +E VLDGDL+ F++ L +++ Sbjct: 311 LEIGFGSQIRSYVLQPYRMAKDLRTRVEVGDVDKVLDGDLEPFIRGFLRMRR 362 >gi|115452569|ref|NP_001049885.1| Os03g0305700 [Oryza sativa Japonica Group] gi|108707729|gb|ABF95524.1| peptide chain release factor 2 family protein, expressed [Oryza sativa Japonica Group] gi|113548356|dbj|BAF11799.1| Os03g0305700 [Oryza sativa Japonica Group] gi|215707188|dbj|BAG93648.1| unnamed protein product [Oryza sativa Japonica Group] Length = 468 Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats. Identities = 155/345 (44%), Positives = 220/345 (63%), Gaps = 1/345 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ + + W ++R L+ E P LW + + A + RE L I + + + Sbjct: 112 AQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFE 171 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L +++ +L LA EEDD + ET L ++ + K+ +LLSG+ DS ++EV A Sbjct: 172 QELMEHIDMLRLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQA 231 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA M++ MY+ WA++R + +E GE AGIK AT+ + G A+G+ K Sbjct: 232 GAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKA 291 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+++ V P++ D S +I +SD RI+ +R+ G GGQH Sbjct: 292 EVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQH 351 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 N T+SAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ ++ S Sbjct: 352 ANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQS 411 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +EI WG QIRSYVL PY+MVKDLRTN E + P VL+GDLDDF+ Sbjct: 412 LSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFI 456 >gi|83593375|ref|YP_427127.1| peptide chain release factor 2 [Rhodospirillum rubrum ATCC 11170] gi|83576289|gb|ABC22840.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodospirillum rubrum ATCC 11170] Length = 322 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 204/309 (66%), Positives = 238/309 (77%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER HL+ +++ + ++ + D L+EL EDD + E L + ++ E Sbjct: 1 MRERTHLEQSVAGYRALEREVDDAATLIELGDAEDDAESIAEGERMLHSAAQKARKQELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD NDAYLEVHAGAGGTE+QDWA +LLRMYTRWAE K E LE GEEAGI Sbjct: 61 SLLSGEADHNDAYLEVHAGAGGTEAQDWALILLRMYTRWAEAHGHKVEFLEESAGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DS++RRHTSFSSIWVYPVVDD+IEI+I E Sbjct: 121 KSATIKIVGHNAYGWLKTESGVHRLVRISPFDSSARRHTSFSSIWVYPVVDDTIEIDIEE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 DCRIDTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQH+NK W+MLRA+LY Sbjct: 181 KDCRIDTYRASGAGGQHVNRTESAVRITHIPTGIVVQCQSERSQHQNKDYCWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKREE E +KT+IGWG QIRSYVLQPYQM+KD RTN+E + VL+GDLD Sbjct: 241 EHELQKREEKTKALEDTKTDIGWGHQIRSYVLQPYQMIKDTRTNVETSDTQGVLNGDLDQ 300 Query: 346 FMKATLAIK 354 FM A+LA + Sbjct: 301 FMAASLAAR 309 >gi|317181479|dbj|BAJ59263.1| peptide chain release factor 2 [Helicobacter pylori F57] Length = 381 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ HL+ + ++ Sbjct: 31 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVHLNRLLETYQKT 90 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 91 KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 150 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNTAK--NEE 328 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380 >gi|289423341|ref|ZP_06425149.1| peptide chain release factor 2 [Peptostreptococcus anaerobius 653-L] gi|289156272|gb|EFD04929.1| peptide chain release factor 2 [Peptostreptococcus anaerobius 653-L] Length = 350 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 165/344 (47%), Positives = 229/344 (66%), Gaps = 4/344 (1%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD D+ R + +N ED W++ A +++E + L + I + +L D +L Sbjct: 3 LFDLDSLKTRQADINASMEDQGFWEDSDHANRILQENKQLTSKIEDYDSLVGQLEDISVL 62 Query: 73 LELALE----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +E+A E E+D +I + + + ++ E L SGE DSN+A L +++G GG Sbjct: 63 IEMAEETSDSEEDKTIEDQLVAYISDVNEKIVNTTMELLFSGEYDSNNAILSINSGTGGL 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ++QDWA MLLRMY RW+E R K + L+I EAGIK+A+L++ G NAYG+LK E+GVH Sbjct: 123 DAQDWAQMLLRMYIRWSEGRGLKVKLLDIISDPEAGIKTASLMVSGVNAYGYLKSEKGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS+ +RHTSF+S+ V P ++D +I I+ +D +IDTYR+SGAGGQHVNTTDS Sbjct: 183 RLVRISPFDSSGKRHTSFASVDVLPEIEDDSDININPNDLKIDTYRSSGAGGQHVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VVQCQ ERSQ NK A ML +KL +++ ++ +E + T+I W Sbjct: 243 AVRITHLPTGIVVQCQNERSQRINKDVAMKMLISKLIQIKEEENKEKIEDLQGKYTQISW 302 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYV QPY++VKD RTN E T+ V+DG LDDFM L Sbjct: 303 GSQIRSYVFQPYKLVKDHRTNKENTNVDAVMDGSLDDFMFEYLK 346 >gi|269215856|ref|ZP_06159710.1| peptide chain release factor 2 [Slackia exigua ATCC 700122] gi|269130806|gb|EEZ61882.1| peptide chain release factor 2 [Slackia exigua ATCC 700122] Length = 364 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 146/353 (41%), Positives = 214/353 (60%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +L G + +RL L+ P W + A+ + + + + + Sbjct: 11 ELAERLAAARGYLHIEENERRLHDLDAVISQPGFWDDAQAAQATSKRASDIRSTLDEYRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 L D LEL E+D + E + + ++ + ES + +D+ DA + V Sbjct: 71 ACATLEDARAALELI--EEDDAFAVEFDELRAGLSSALDRMEVESWFTDPSDACDAIVSV 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + G+GG E+QDW +ML RMY R+AEK+ +K + L++ GE G+ A + I+G NA+G L Sbjct: 129 NPGSGGLEAQDWTDMLYRMYVRYAEKKGWKVKLLDVVPGEVIGLDRAVVQIEGKNAFGML 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP D RR T+F+ + V PVV+D IE+EI+ SD R+D YR+SG GGQ Sbjct: 189 RSEHGVHRLVRISPTDDKKRRQTTFAGVEVLPVVEDDIEVEINPSDVRVDVYRSSGPGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A+ +LRAKLYELE QKRE+ + Sbjct: 249 CVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKESAFKVLRAKLYELERQKREDEMDALRG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + +G QIR+YVL PYQ+VKD+R+ +E + VLDG +D+F+ + Sbjct: 309 EKRDNSFGSQIRNYVLYPYQLVKDVRSGVETGNVDAVLDGQIDEFVIGYHRWR 361 >gi|227497420|ref|ZP_03927652.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM 15434] gi|226833096|gb|EEH65479.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM 15434] Length = 374 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 145/357 (40%), Positives = 217/357 (60%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D R++ L+ + P LW + A+++ H + +++ Sbjct: 11 RLRHTHASIEAVTDPQALRARIAELSEQAAAPDLWDDPDAAQVVTSNLSHAQADLKRVED 70 Query: 62 IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + R+ D ++E+A EE D +L E +L I ++ + +LLSGE D DA Sbjct: 71 LGSRIDDLEAMVEMAGEEEGDDAAELLAEAESDLASISKDLSELEIRTLLSGEYDQRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY RWAE+ + T+ L+ EEAG+KS T + P AY Sbjct: 131 VTIRSGAGGVDAADFAEMLLRMYLRWAERHGYATKVLDTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + IE+ E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIEVPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L+ + E+ Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQ-QEEDAKKK 309 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVL PYQMVKDLRT+ E +P V DGD+D F+ A + +K Sbjct: 310 ELAGDVKASWGDQMRSYVLNPYQMVKDLRTSYEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|154253713|ref|YP_001414537.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1] gi|154157663|gb|ABS64880.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1] Length = 322 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 208/310 (67%), Positives = 246/310 (79%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +MRER L+ AI + ++ L DNL L+E+ E D +I+ E L+ + + Sbjct: 1 MMRERTRLEEAIGRYRALEASLNDNLELIEMGEAEGDAAIVAEAEAALKAARDVAAEAEI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 E+LLSGEAD+ND Y+E+HAGAGGTESQDWA MLLRMYTRWAE++ +K E +E HDGEEAG Sbjct: 61 ETLLSGEADANDTYVEIHAGAGGTESQDWAQMLLRMYTRWAERKGYKVELMERHDGEEAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+L+KG NA+GWLK E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD I+IE+S Sbjct: 121 IKSATILVKGHNAFGWLKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDKIDIEVS 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E+D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQHKN+A AW+MLRA+L Sbjct: 181 EADVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQNERSQHKNRATAWDMLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE ELQKRE+ A S KT+IGWG QIRSYVLQPYQMVKDLRT +E + VL GDLD Sbjct: 241 YEAELQKREDAAAAQASGKTDIGWGHQIRSYVLQPYQMVKDLRTGVETSDTDGVLGGDLD 300 Query: 345 DFMKATLAIK 354 FM A LA + Sbjct: 301 PFMAAALAAR 310 >gi|268316864|ref|YP_003290583.1| LigA [Rhodothermus marinus DSM 4252] gi|262334398|gb|ACY48195.1| LigA [Rhodothermus marinus DSM 4252] Length = 371 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 153/356 (42%), Positives = 225/356 (63%), Gaps = 7/356 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ LG D ++++ LN + P W N A+ + ++ ++ ++ +++ Sbjct: 8 LLERVDTLGRFLDIPGRKEKIAKLNEERLAPGFWDNPERAREVEKQIAEEESWVAAWEQL 67 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D LLEL EE D ++ +E + + R++ +++ + SLL+ D +A L +H Sbjct: 68 RRQADDVQTLLELQQEEPDANLEEEIAREVARLEQQLDELELRSLLTDPDDHRNAILTIH 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA MLLRMYTRW E+ + E LE G+ AGIKSATL I GP AYG+LK Sbjct: 128 PGAGGTESQDWAEMLLRMYTRWGERHGYDVELLEYQAGDVAGIKSATLRIAGPYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+D++ RRHTSF+S++VYP +DDSIE++I + + T+R+ G GGQ+ Sbjct: 188 GESGVHRLVRISPFDASGRRHTSFASVFVYPEIDDSIEVDIRPDEIEMQTFRSGGKGGQN 247 Query: 243 VNTTDSAVRITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 VN ++ VR+ VV +C +ERSQ +N+ +A ML++++Y+LE + RE Sbjct: 248 VNKVETGVRLIWHGKLSNGEEARVVAECTEERSQLQNRQRALTMLKSRIYQLEREIREAE 307 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ES K +I WG QIRSYV QPY MV D RT + T V+DGDLD F++A L Sbjct: 308 KRKRESQKKKIEWGSQIRSYVFQPYTMVNDHRTETKVTDVQAVMDGDLDPFIRAYL 363 >gi|212716462|ref|ZP_03324590.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM 16992] gi|212660715|gb|EEB21290.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM 16992] Length = 376 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L + +P LW + A+ + + + + + + Sbjct: 12 EARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDDPENAQKVTSKLSAVQSQLKRLSS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EEDD L E ++ I+ ++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGQEEDDADTLAEARSEVESIQNDLADMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 363 >gi|256820726|ref|YP_003142005.1| peptide chain release factor 2 [Capnocytophaga ochracea DSM 7271] gi|256582309|gb|ACU93444.1| bacterial peptide chain release factor 2 (bRF- 2) [Capnocytophaga ochracea DSM 7271] Length = 367 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 233/351 (66%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L FD D +S KT P W N EA+ +MRE + + +E Sbjct: 10 LVNRLGALRRYFDVDAKRIEISNEEEKTFAPDFWDNAKEAEKVMRELRTKKKWVEDYEEA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D +LL+ E + + ++ + +E +F ++LS E D+ A L++ Sbjct: 70 ENLTSDIEVLLDFFKEGE--ATAEDVDHQYTQALHAIEALEFRNMLSDEGDTMSAVLQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+MLLRMYT W +K+K + L +G+ AG+K+ T+ I+G A+G+LK Sbjct: 128 AGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGVKTVTIEIEGEYAFGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ +D +T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPADITFETMRSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H PTG++++ + RSQ NK +A +L+++LYE+EL+KR+ + E+ Sbjct: 248 VNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIR+YV+ PY++VKD+RTN E T V++G+LD+F+KA L + Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDEFLKAYLML 358 >gi|111023366|ref|YP_706338.1| peptide chain release factor 2 [Rhodococcus jostii RHA1] gi|123339715|sp|Q0S2Q6|RF2_RHOSR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|110822896|gb|ABG98180.1| peptide chain release factor RF2 [Rhodococcus jostii RHA1] Length = 368 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 149/353 (42%), Positives = 219/353 (62%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + + H + ++E Sbjct: 11 ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L ELA +E + + ++ ++ + +++LSGE D DA + + Sbjct: 71 LRTRLDDMPVLYELAEDEG-ADAIADADAERHSLREDIAAMEVKTMLSGEYDERDALVNI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK + E + EEAGIKSAT +K P +YG L Sbjct: 130 RSGAGGVDAADWAEMLMRMYVRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+++E+D R+D YR+SG GGQ Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E++ ++ + + Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLEVKRKEERAEMDALKG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F+++ + + Sbjct: 310 DGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLESGIRWR 361 >gi|300722130|ref|YP_003711413.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC 19061] gi|297628630|emb|CBJ89208.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC 19061] Length = 310 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 171/309 (55%), Positives = 221/309 (71%), Gaps = 1/309 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L++ + I ++ L D LLELA+E DD E L +++ ++ +F Sbjct: 1 MGKERSSLESIVETIDQLDQGLEDVNGLLELAVEADDEETFNEAVAELDQLEEKLGLLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG Sbjct: 61 RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ Sbjct: 121 LKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHMPTGIVTQCQTDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 241 YELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLD 299 Query: 345 DFMKATLAI 353 F++A+L Sbjct: 300 KFIEASLKA 308 >gi|256826989|ref|YP_003150948.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641] gi|256583132|gb|ACU94266.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641] Length = 364 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 147/350 (42%), Positives = 203/350 (58%), Gaps = 2/350 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + +L D QRL+ L+ +T P W ++ A+ + +E + + + Sbjct: 11 AERLTEAHSFLHIDARKQRLAELDQQTAQPGFWDDIDRAQAVSKEASDIRTLLDTYEHAH 70 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L+LA DD E + ++ + ES D D + ++ Sbjct: 71 TLLDDWRCALDLAQ--DDPDFATEAQKAADELSRLLDDFEIESWFGNRFDEGDCIVTINP 128 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GG E+QDW +ML MYT++AE R +K L+ GE GI+ A+ I+G AYG L+ Sbjct: 129 GSGGLEAQDWCDMLFHMYTKYAENRGWKVRVLDAPLGEVIGIEHASFQIEGRFAYGMLRS 188 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP D RRHT+F+S+ V PV+ D IE+ ++ +D R+D YRASG GGQ V Sbjct: 189 EIGVHRLVRISPTDDKKRRHTTFASVEVMPVLPDDIEVNLNPADVRVDVYRASGPGGQCV 248 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIPTG VV CQ ++SQ +NK A+ +LRA+L+ELE +KR+E K Sbjct: 249 NTTDSAVRLTHIPTGTVVTCQNQKSQLQNKEAAFRILRARLFELEERKRQEEIEALRGEK 308 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +G QIR+YVL PYQMVKDLR+ IE + VL GDLD F+ Sbjct: 309 RENSFGSQIRNYVLYPYQMVKDLRSGIETGNVDAVLGGDLDQFVIGYHRW 358 >gi|124515298|gb|EAY56808.1| Peptide chain release factor 2 [Leptospirillum rubarum] Length = 370 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 174/356 (48%), Positives = 240/356 (67%), Gaps = 5/356 (1%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M+ +R GG+FD D L ++ +++ P W++ A+ ++RE+ L+ +S I+ Sbjct: 1 MEKNRGFPRSGGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQ 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 I+ D L ELA D L E S + V+ + E +LS N A+LE Sbjct: 61 GIEKEDADIRALFELAS---DPDFLAELSRRVPEFSESVKAFELEEILSDAKSDNPAFLE 117 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTESQDWA MLLRMY RWAE+ E ++I GEEAGIKSAT+L++G +A+G+ Sbjct: 118 IHPGAGGTESQDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGY 177 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G+HRLVRISP+D+N RRHTSF+S++VYP ++D I +EI + D RIDT+RAS AGG Sbjct: 178 LMSESGIHRLVRISPFDANKRRHTSFTSVFVYPELEDDIPVEIRDEDIRIDTFRASSAGG 237 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-- 298 QHVN T SA+R+TH+PTG+V+ Q ERSQ +N+ A+ +LRAKLYELE ++++E + Sbjct: 238 QHVNKTSSAIRLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKIS 297 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G +K EIGWG QIRSYVLQPYQ++KD RT +E S+VLDGDLD F++ L + Sbjct: 298 GAQNKKEIGWGHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYLLAR 353 >gi|326771885|ref|ZP_08231170.1| peptide chain release factor 2 [Actinomyces viscosus C505] gi|326638018|gb|EGE38919.1| peptide chain release factor 2 [Actinomyces viscosus C505] Length = 373 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 147/357 (41%), Positives = 217/357 (60%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNLILLELALEEDDCS---ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D ++ELA EE+ IL E +L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGEDAAEILAEAEMDLAAISKDLSDLEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ + + L EEAG+KS T + P AY Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L+ + E+ Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQ-QEEDAKKK 309 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVL PYQMVKDLRTN E +P V DGD+D F+ A + +K Sbjct: 310 ELAGDVKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|210615399|ref|ZP_03290526.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787] gi|210150248|gb|EEA81257.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787] Length = 313 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 161/309 (52%), Positives = 219/309 (70%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L + + + ++ D +L+E+A +E+D S+L E L + E + + Sbjct: 1 MKELKSLKDFLEKVSQLTTSYEDIGVLIEMAYDENDESLLPEIESELTAFQQGYEEIRIQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE D ++A + +HAGAGGTES DWANML RMYTRWAE++ F E L+ DG+ AG+ Sbjct: 61 TLLSGEYDKDNAIVTLHAGAGGTESCDWANMLYRMYTRWAERKGFSVEVLDFLDGDVAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T + G NAYG+LK E+GVHRLVRISP+++ +R TSF+S V P ++D I+IE+++ Sbjct: 121 KAVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDDIDIELND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYRASGAGGQHVN T SA+RITHIPTG+VVQCQ ERSQH NK +A ML+AKLY Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHIPTGIVVQCQNERSQHNNKEKAMQMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++ E + EIG+G QIRSYV+QPY +VKD RTN+E + S VLDG++D Sbjct: 241 LLKEQEQAEKVSDIRGEIKEIGFGNQIRSYVMQPYTLVKDHRTNVESGNVSSVLDGNIDL 300 Query: 346 FMKATLAIK 354 FM A L + Sbjct: 301 FMNAYLKAQ 309 >gi|119025481|ref|YP_909326.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC 15703] gi|154486912|ref|ZP_02028319.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis L2-32] gi|118765065|dbj|BAF39244.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC 15703] gi|154084775|gb|EDN83820.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis L2-32] Length = 376 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 141/353 (39%), Positives = 209/353 (59%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D L K +P LW + A+ + + + + + + Sbjct: 12 EARAKYESISKALDVDRLTAEAKDLEVKAAEPGLWDDPENAQKVTSKLSAVQSQLKRLAS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE+D L E ++ I+ +++ + ++LL GE D A + + Sbjct: 72 ADQRIEDVETLVELGQEEEDADTLAEAKAEVESIQKDLDDMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D+F++A + + Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDEFIEAGIRWR 363 >gi|166154673|ref|YP_001654791.1| peptide chain release factor 2 [Chlamydia trachomatis 434/Bu] gi|238687385|sp|B0B832|RF2_CHLT2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|165930661|emb|CAP04158.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis 434/Bu] Length = 368 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 160/350 (45%), Positives = 211/350 (60%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L D + L L + W +V A + L +S E+ Sbjct: 12 LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++++ LE D + +E + ++ + LLSGE D N +L ++ Sbjct: 72 KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DW M+LRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQH Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI + Sbjct: 252 VNVTDSAVRITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 K EI WG QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361 >gi|220905200|ref|YP_002480512.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869499|gb|ACL49834.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 370 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 159/349 (45%), Positives = 222/349 (63%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ L G D + +RL + T+ P W L++E++ L++ ++ + ++ Sbjct: 14 LAQRFASLWGRLDVAASEKRLQAIETEISRPGAWDKPEALTPLLQEKRRLEDEVARLNKL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L LA E +D L+ + + + ++ + LLS E DS DA LE+H Sbjct: 74 KTCHDDMNEWLALAAESEDPEALESLAQQQKDLAALLDETELVMLLSAEEDSQDAILEIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA MLLRMYTRWA +K E L+ G+EAG+KS TL + GP+A+G+LK Sbjct: 134 PGAGGTESQDWAEMLLRMYTRWAADHDYKVEELDFLPGDEAGVKSVTLRVGGPHAFGFLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+G+HRL+RISP+DS+ RRHTSF+S+ V P D IE+++ E+D R+D +R+SG GGQ Sbjct: 194 SERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGDDIELDLKEADLRVDIFRSSGPGGQS 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVRITHIP+G+ QCQ E+SQH NK A +LRA+LY +EL+KRE + Sbjct: 254 VNTTSSAVRITHIPSGISAQCQNEKSQHHNKETALRVLRARLYNMELEKREAARQAQYAG 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K I +G QIR+Y LQPY++VKD RT E VLDG +D F L Sbjct: 314 KDAIAFGSQIRTYTLQPYRLVKDHRTGTEVGDVDAVLDGQIDAFQHDYL 362 >gi|329667680|gb|AEB93628.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii DPC 6026] Length = 332 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 150/324 (46%), Positives = 209/324 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ + + K+++ + D LEL + D + +E S Sbjct: 1 MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A Sbjct: 61 EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHD 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NMLRAKL++LE +K+ + + ++ EIG+G QIRSYV PY MVKD RTN Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DG LD+F+ A L Sbjct: 301 FESSDVNGVMDGKLDNFIYAYLQW 324 >gi|317179974|dbj|BAJ57760.1| peptide chain release factor 2 [Helicobacter pylori F32] Length = 381 Score = 345 bits (884), Expect = 8e-93, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 31 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 90 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 91 KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 150 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 328 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380 >gi|169794367|ref|YP_001712160.1| peptide chain release factor 2 [Acinetobacter baumannii AYE] gi|184159830|ref|YP_001848169.1| protein chain release factor B [Acinetobacter baumannii ACICU] gi|213159055|ref|YP_002321053.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057] gi|215481924|ref|YP_002324106.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294] gi|239503845|ref|ZP_04663155.1| peptide chain release factor 2 [Acinetobacter baumannii AB900] gi|260557921|ref|ZP_05830134.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606] gi|332854818|ref|ZP_08435581.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150] gi|332868948|ref|ZP_08438507.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113] gi|332872826|ref|ZP_08440791.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059] gi|169147294|emb|CAM85155.1| peptide chain release factor 2 [Acinetobacter baumannii AYE] gi|183211424|gb|ACC58822.1| Protein chain release factor B [Acinetobacter baumannii ACICU] gi|213058215|gb|ACJ43117.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057] gi|213988530|gb|ACJ58829.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294] gi|260408712|gb|EEX02017.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606] gi|322509742|gb|ADX05196.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2] gi|323519757|gb|ADX94138.1| protein chain release factor B [Acinetobacter baumannii TCDC-AB0715] gi|332727820|gb|EGJ59224.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150] gi|332732991|gb|EGJ64193.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113] gi|332738987|gb|EGJ69849.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059] Length = 310 Score = 345 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 170/308 (55%), Positives = 225/308 (73%), Gaps = 1/308 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATLA 352 F++A+L Sbjct: 300 RFIEASLK 307 >gi|302334951|ref|YP_003800158.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM 7084] gi|301318791|gb|ADK67278.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM 7084] Length = 370 Score = 345 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 155/352 (44%), Positives = 206/352 (58%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+R+L+ + D + ++ L ++ P W + A M E + I++ Sbjct: 11 LARRLDEVESYLHIDERRRVVAELEERSARPGFWDDADAASRSMTELTRAKEDVQGIEDA 70 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D LEL LE D +L E + ++ E+ + S + + D DA + V Sbjct: 71 RTRLGDASAALELGLETGDGDLLDEAARICGALEDELGELELSSWFADDLDHGDAIVTVT 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+QDW +ML +MY R+ ++R +K + E GI AT + G NAYG L+ Sbjct: 131 PGQGGLEAQDWCDMLFKMYLRYCDRRGWKVTVNDAPAAEAIGIDRATFTVSGKNAYGMLR 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRLVRISP D RR T+F+ + V PV+ D +E++I D RID Y ASG GGQ Sbjct: 191 AEQGVHRLVRISPTDDKKRRQTTFAGVEVLPVLPDDVEVDIDPGDLRIDVYHASGHGGQG 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG VV CQ ERSQ +NKA A +LR++LYELEL KRE + Sbjct: 251 VNTTDSAVRITHLPTGTVVTCQNERSQIQNKAIAMGILRSRLYELELAKREAEIDELRGP 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353 K EIG+G QIRSYVL PYQ+VKDLRT +E + VL DGDLD F+ Sbjct: 311 KHEIGFGNQIRSYVLYPYQLVKDLRTGVETGNVESVLDDGDLDKFIVGYHRW 362 >gi|166155548|ref|YP_001653803.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|238687484|sp|B0BC97|RF2_CHLTB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|165931536|emb|CAP07112.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 368 Score = 345 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 160/350 (45%), Positives = 211/350 (60%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L D + L L + W +V A + L +S E+ Sbjct: 12 LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++++ LE D + +E + ++ + LLSGE D N +L ++ Sbjct: 72 KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DW M+LRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQH Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI + Sbjct: 252 VNVTDSAVRITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 K EI WG QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361 >gi|157738274|ref|YP_001490958.1| peptide chain release factor 2 [Arcobacter butzleri RM4018] gi|315636563|ref|ZP_07891799.1| peptide chain release factor RF2 [Arcobacter butzleri JV22] gi|166977372|sp|A8EWG5|RF2_ARCB4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157700128|gb|ABV68288.1| peptide chain release factor 2 [Arcobacter butzleri RM4018] gi|315479212|gb|EFU69909.1| peptide chain release factor RF2 [Arcobacter butzleri JV22] Length = 365 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 162/342 (47%), Positives = 224/342 (65%), Gaps = 2/342 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + G+ D +RL + + W +V A + E+ + ++ + D L Sbjct: 20 IKGILKPDILNKRLEEIKNEEASQDFWNDVENATKIGIEKNRILGKLNKFNKAFDSLTGT 79 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A E D L+ + ++ ++ + +LS DS++A + +H GAGGTE Sbjct: 80 NELYEMATAEKDDETLEMLYEEASDLENLIKSTEISVMLSNPDDSSNAIVSIHPGAGGTE 139 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWA++L RMY RWAE+ FK E L+ G+EAGIK + +IKG NAYG++K E G+HR Sbjct: 140 SQDWASILYRMYLRWAERNDFKVELLDYQAGDEAGIKDVSFIIKGENAYGYMKAENGIHR 199 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DSN++RHTSFSS+ V P +DD+I I I + D RIDTYRASGAGGQHVN T+SA Sbjct: 200 LVRISPFDSNAKRHTSFSSVMVSPEIDDNINIVIEDKDIRIDTYRASGAGGQHVNKTESA 259 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITHIPTG+VVQCQ +RSQHKNK A+ ML+++LYE EL+K+ A+ K++ GWG Sbjct: 260 IRITHIPTGIVVQCQNDRSQHKNKDSAFKMLKSRLYEYELEKQR--ASKDGIEKSDNGWG 317 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVLQPYQ VKD R+NI ++ +LDGD+ ++ L Sbjct: 318 HQIRSYVLQPYQQVKDSRSNIGYSNVDAILDGDITKMIEDVL 359 >gi|226365870|ref|YP_002783653.1| peptide chain release factor 2 [Rhodococcus opacus B4] gi|254790919|sp|C1B1L3|RF2_RHOOB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226244360|dbj|BAH54708.1| peptide chain release factor 2 [Rhodococcus opacus B4] Length = 368 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 150/353 (42%), Positives = 221/353 (62%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + + H + ++E Sbjct: 11 ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L ELA +E +I ++ ++ ++ + +++LSGE D DA + + Sbjct: 71 LRTRLDDMPVLYELAEDEGAEAIADADAER-HSLREDIAAMEVKTMLSGEYDERDALVNI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK + E + EEAGIKSAT +K P +YG L Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+++E+D R+D YR+SG GGQ Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E++ ++ + + Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLEVKRKEERAEMDALKG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F+++ + + Sbjct: 310 DGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVNNPSSVLDGDIDGFLESGIRWR 361 >gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM 44385] gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii DSM 44385] Length = 379 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 151/359 (42%), Positives = 218/359 (60%), Gaps = 8/359 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D+ ++ L + DP LW + A+ + + H+ I + + Sbjct: 12 LNSTLTTIEKVVDVDDLKDQVRELEAQASDPSLWDDPDHAQQVTSKLSHVQAQIKKVTTL 71 Query: 63 QDRLCDNLILLELALEEDDC-------SILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + R+ D ++ ELA + + + + ++ E+E + +++LSGE D Sbjct: 72 RQRVDDMPVMYELADDATEAGDTDAADEAREMADSERETLRHEIESLEVQTMLSGEYDER 131 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A + + + AGG ++ DWA ML+RMYTRW E+ K + +I EEAGIKSAT ++ G Sbjct: 132 EAVVNIRSAAGGVDAADWAEMLMRMYTRWTEQHGHKIDVFDISYAEEAGIKSATFIVHGD 191 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 YG L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+ Sbjct: 192 YMYGQLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIDENDVRVDVYRS 251 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L AKL + + ++ + Sbjct: 252 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKLLDRKREEEQAE 311 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 N + WG Q+RSYVL PYQMVKDLRTN E PS VLDGDLD F++A + + Sbjct: 312 MNALKGDG-SNSWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGIRWR 369 >gi|283955061|ref|ZP_06372564.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 414] gi|283793428|gb|EFC32194.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 414] Length = 366 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 232/353 (65%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ +++ +++ + + LLSGE DS +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDVPKLEDTITSLEISMLLSGENDSKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN G Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELLKQQDNANAG--E 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|223940442|ref|ZP_03632294.1| peptide chain release factor 2 [bacterium Ellin514] gi|223890887|gb|EEF57396.1| peptide chain release factor 2 [bacterium Ellin514] Length = 384 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 154/354 (43%), Positives = 216/354 (61%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+R GG FD N +RL L++ W N +A+ L+ E L + + + Sbjct: 16 LARNWPTYGGFFDVANVQKRLGELDSLMAGESFWSNRDQAQKLIDESNSLRKKVEPLLKA 75 Query: 63 QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + +L D +++ELA E + + L E+E + + L+G D N+ L Sbjct: 76 EKQLEDYKVMIELAEAEPAAEQEKYQNDVDRELVVFNKELENLELKVFLNGPHDKNNCIL 135 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 ++AGAGGTES DWANMLLRMY RWAE R ++ E + GE AGIKSATLLI G NAYG Sbjct: 136 SINAGAGGTESCDWANMLLRMYQRWAELRGWQVEVTDALPGETAGIKSATLLISGENAYG 195 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 + K E+GVHRLVRISP+DSN RRHTSF+S+ +++ EI I ++ +DT+R+ G G Sbjct: 196 FCKAERGVHRLVRISPFDSNKRRHTSFASVDAIAEIEEEGEIAIPPNEFHVDTFRSGGKG 255 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ+VN ++AVRITHIPTG+VV Q +RSQH+N+A A +L ++++ L +++ Sbjct: 256 GQNVNKVETAVRITHIPTGLVVASQTQRSQHQNRATAMKLLLSRIFAQRLDAQKQEMERF 315 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + WG QIRSYV QPY+MVKDLRT +E + V+DGDLD ++ L Sbjct: 316 YGEKGSVSWGNQIRSYVFQPYRMVKDLRTGVETSDVQGVMDGDLDPYVNGWLRA 369 >gi|237752014|ref|ZP_04582494.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC BAA-430] gi|229376581|gb|EEO26672.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC BAA-430] Length = 367 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 170/354 (48%), Positives = 230/354 (64%), Gaps = 8/354 (2%) Query: 2 KLSRQLN----CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS 57 +L + LN + + + R+ + + W++ +A L +E++ + + Sbjct: 8 ELLKTLNIKCENIKKIMQPSSLKNRILEITELEQTKDFWEDAKKAGELQKEKKRCERQLE 67 Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 + L D + L EL+ DD L+ + ++ ++ + E +LS DSN+A Sbjct: 68 KYNNAKSALDDAIELFELS--SDDLESLEVLFAESEELESIIKNAEIEVMLSDPLDSNNA 125 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + GAGGTESQDWA+ML RMY RWAE++ FK E L+ +G+EAGIK A+ +IKG NA Sbjct: 126 IFTITPGAGGTESQDWASMLYRMYLRWAERKDFKVELLDYQEGDEAGIKDASFIIKGENA 185 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+ K E GVHRLVRISP+D+N++RHTSFSS+ V P +DD I IEI E D IDTYRASG Sbjct: 186 YGYAKAENGVHRLVRISPFDANAKRHTSFSSVQVSPEIDDEINIEIDEKDLEIDTYRASG 245 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQHVN T+SAVRITH P+G+VVQCQ +RSQHKNKA A ML++KLYELE KRE +N Sbjct: 246 AGGQHVNKTESAVRITHKPSGIVVQCQNDRSQHKNKASALKMLKSKLYELERLKREAESN 305 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K + GWG QIRSYVL PYQ VKDLR+N+ T+ +LDGD+D ++ L Sbjct: 306 --HTDKGDNGWGHQIRSYVLTPYQQVKDLRSNLAYTNVDAILDGDIDTILEGVL 357 >gi|217034219|ref|ZP_03439638.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10] gi|216943387|gb|EEC22846.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10] Length = 381 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 173/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 31 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 90 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + + +LSGE D+++A + + Sbjct: 91 KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIKIMLSGENDASNAIITIQ 150 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 328 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380 >gi|119358306|ref|YP_912950.1| peptide chain release factor 2 [Chlorobium phaeobacteroides DSM 266] gi|119355655|gb|ABL66526.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium phaeobacteroides DSM 266] Length = 363 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD D +++ L T DP W + EA ++E + +++ Sbjct: 16 TSYGGIFDVDERKEKIDDLEKITADPGFWNDQQEANRTLKELSEHKSWTGAFDKLEAAAK 75 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + L +A E D S E ++ I+ + +F ++LSG+ D +A + +HAGAGG Sbjct: 76 TSGEELTIADELQDESFADELIASIAAIESGIAAIEFRNMLSGKDDPGNAIITIHAGAGG 135 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK E GV Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKVFTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGV 195 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SP+DSN+RRHTSF+S++ YP +EI++ + D + T+R+ G GGQ+VN + Sbjct: 196 HRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVE 255 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVRI HIP+G+VV CQQERSQ +N+ +A ML A+LY+ + ++ + E K +I Sbjct: 256 TAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREIEGKKKKIE 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL + +KD RTN E+ VLDGDLD FM+ L+ Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDTFMEKYLS 359 >gi|283956828|ref|ZP_06374302.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 1336] gi|283791689|gb|EFC30484.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 1336] Length = 365 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIKTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--TGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|260771797|ref|ZP_05880715.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14] gi|260613089|gb|EEX38290.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14] Length = 320 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 165/317 (52%), Positives = 221/317 (69%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L + I +++ + D LLELA+E D E L+ + Sbjct: 2 WNEPERAQALGKERSSLQAVVETINQLEQGVDDVEGLLELAIEAQDQETFDEVLPELEEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++ +F + SG+ D+ Y+++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE + Sbjct: 62 EAKLAQLEFRRMFSGDHDAAHCYIDLQAGSGGTEAQDWTSMLLRMYLRWADDKGFKTEVI 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S +VYP + Sbjct: 122 EVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D++I ++I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Q Sbjct: 182 DENIAVDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLK 317 >gi|251780395|ref|ZP_04823315.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084710|gb|EES50600.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 325 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 155/326 (47%), Positives = 220/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W + A+ + +E + + + I ++ +Q +L D +L E+ +++DD E Sbjct: 1 MQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVLKEM-MDDDDEESAYEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +N++ I+ E++ E LLSGE D N+A L +H G GGT++ DW MLLRMYTRW EK+ Sbjct: 60 NNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKN 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E +++ +G+EAGIKS TL + G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASM 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +I+I D ++DTYRASGAGGQH+N TDSAVRITHIPTGVVVQCQ ERSQ Sbjct: 180 EVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHIPTGVVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A ML+AKL EL+ + +E ++GWG QIRSYV PY +VKD RTN Sbjct: 240 FSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 +E ++ + V+DGDLD F+ + L K Sbjct: 300 VEVSNVTAVMDGDLDLFINSYLKSSK 325 >gi|213692886|ref|YP_002323472.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524347|gb|ACJ53094.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459060|dbj|BAJ69681.1| peptide chain release factor [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 374 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 138/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D + + L T+ P LW + A+ + ++ + + Sbjct: 12 EARAKYESIAKALDINRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVL-RHEEEAKKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD++ F++A + + Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363 >gi|169832218|ref|YP_001718200.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator MP104C] gi|169639062|gb|ACA60568.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator MP104C] Length = 330 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 158/325 (48%), Positives = 208/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P WQ A+ + R L + ++ D +LLEL E +D +E Sbjct: 1 METPDFWQQQERAQEVTRRLAGLRQQVEVFDTLRRDFEDAAVLLELGEEIEDPDTAREVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L + V + E LLSG D +A L +HAGAGG E+QDW ML RMY RWAEKR Sbjct: 61 RSLAELGRRVAALELELLLSGPYDEANAILSLHAGAGGLEAQDWVEMLFRMYLRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E L+I +EAG+K+ T L+ GP AYG+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 YAVEVLDILPDDEAGLKNVTFLVSGPMAYGYLRAEKGVHRLVRISPFDAGGRRHTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P V ++ I+I+ D RIDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 DVLPEVAENTAIDINPEDLRIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVSCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A +L+A+L +LEL++REE + +I WG QIRSYV PY MVKD RT Sbjct: 241 IANRNAAMKLLKARLLDLELRRREEEIAALRGEQPDIAWGSQIRSYVFHPYSMVKDHRTK 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 EK + V+DG++D+F++A L K Sbjct: 301 FEKGNVDAVMDGEIDEFIQAYLVWK 325 >gi|313906145|ref|ZP_07839494.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6] gi|313469032|gb|EFR64385.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6] Length = 332 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W N EA+ +E L N ++ D +++E+ EEDD SI+ E Sbjct: 1 MEEPDFWNNPDEAQKQTKELGDLKNDRDTYAKLVSTKEDIEMMIEMGEEEDDESIVPEVR 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L ++ + ++LLS E D N+A + ++AGAGGTE+ DW ML RMYTRWAE++ Sbjct: 61 EMLDDFIETLDGVRIKTLLSEEYDVNNAIIRLNAGAGGTEAMDWCGMLYRMYTRWAERKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L++ +G+EAGIKS + G NAYG LK E GVHRLVRISP+++ ++R TSF S Sbjct: 121 FAIEELDMQEGDEAGIKSVMFQVNGTNAYGLLKSESGVHRLVRISPFNAQAKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++D I+IE+ + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ Sbjct: 181 DVMPELNDDIDIEVRDEDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A +L+AKLY LE +K+ E A T+I WG QIRSYVLQPY MVKDLRTN Sbjct: 241 FQNKDKAMQVLKAKLYMLEQEKQAEKAAGIRGEVTDIAWGHQIRSYVLQPYTMVKDLRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 EK S VLDGDLD F+ A L + Sbjct: 301 AEKAQASAVLDGDLDPFINAYLKWQ 325 >gi|15605186|ref|NP_219972.1| peptide chain release factor 2 [Chlamydia trachomatis D/UW-3/CX] gi|76789195|ref|YP_328281.1| peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13] gi|7388051|sp|O84465|RF2_CHLTR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|123606855|sp|Q3KLN9|RF2_CHLTA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|3328893|gb|AAC68059.1| Peptide Chain Release Factor 2 [Chlamydia trachomatis D/UW-3/CX] gi|76167725|gb|AAX50733.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13] Length = 369 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 212/342 (61%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 LFD + L L + W +V+ A + L +S E+++++ Sbjct: 21 RSLFDPEGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQ 80 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LE D + +E + ++ + LLSGE D N +L ++AGAGGTES Sbjct: 81 FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 140 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW MLLRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K E GVHRL Sbjct: 141 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 200 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAV Sbjct: 201 VRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 260 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI +K EI WG Sbjct: 261 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 320 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 321 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 362 >gi|288957379|ref|YP_003447720.1| peptide chain release factor RF-2 [Azospirillum sp. B510] gi|288909687|dbj|BAI71176.1| peptide chain release factor RF-2 [Azospirillum sp. B510] Length = 322 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 191/309 (61%), Positives = 242/309 (78%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER LD +++ + ++ L D+L L+E+ E+D +++ + L ++ Q E Sbjct: 1 MRERTQLDTSVAGYRALERDLSDSLELIEMGEMEEDATVVADAEAQLYGLRDRANKLQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND ++EV+AGAGGTE+QDWA ML+RMYTRWAE+ +KTE L+ GEEAGI Sbjct: 61 SLLSGEADANDCFVEVNAGAGGTEAQDWALMLMRMYTRWAEQHGYKTEWLDETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ IKG NAYGWLK E GVHRLVRISP+DS +RR TSF+++ + PV+DD I+IEI+E Sbjct: 121 KSATVQIKGHNAYGWLKTEAGVHRLVRISPFDSQARRQTSFAAVSISPVIDDKIDIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 DCRIDTYRASGAGGQH+N TDSAVRITHIPT +VV CQQERSQHKN+A+AW+MLRA+LY Sbjct: 181 KDCRIDTYRASGAGGQHINKTDSAVRITHIPTNIVVSCQQERSQHKNRAKAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+ RE+ A E++KT+IGWG QIRSYVL PYQMVKDLRT +E + VLDG LD Sbjct: 241 ERELKIREDAAAALEATKTDIGWGHQIRSYVLHPYQMVKDLRTEVETSQSQAVLDGALDP 300 Query: 346 FMKATLAIK 354 F++A LA + Sbjct: 301 FLEAALASR 309 >gi|310829208|ref|YP_003961565.1| peptide chain release factor 2 [Eubacterium limosum KIST612] gi|308740942|gb|ADO38602.1| peptide chain release factor 2 [Eubacterium limosum KIST612] Length = 310 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 176/306 (57%), Positives = 223/306 (72%), Gaps = 3/306 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L +++D L D L++ EL E ++ E D ++ E+E + E Sbjct: 1 MKELKILRQKKGEYDKLKDNLDDILVMFELIDEGEEMD---ELPDTIEAFGKELEKFKLE 57 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE DSN+A + +H GAGGTESQDWA MLLRMYTRWAE++ FK ++L++ G+ AGI Sbjct: 58 TLLSGEYDSNNAIISLHPGAGGTESQDWAEMLLRMYTRWAERKGFKVKSLDLQPGDVAGI 117 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLI+G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+ Sbjct: 118 KSATLLIEGINAYGYLKTERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINP 177 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R+DTYRASGAGGQHVN T SA+RITHIPTGVVVQCQ ERSQH+NK A NML+ KL Sbjct: 178 DDIRVDTYRASGAGGQHVNKTSSAIRITHIPTGVVVQCQNERSQHQNKEVAMNMLKGKLV 237 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ Q+++E + ++I WG QIRSYV PY MVKD RTN+E + V+DGDLD Sbjct: 238 EIMEQEQKEKLDDVVGDYSQIAWGSQIRSYVFHPYNMVKDHRTNVEVGNIQSVMDGDLDQ 297 Query: 346 FMKATL 351 FM A L Sbjct: 298 FMNAYL 303 >gi|86152591|ref|ZP_01070796.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843476|gb|EAQ60686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 365 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASGLFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--TGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|224282580|ref|ZP_03645902.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB 41171] gi|310287040|ref|YP_003938298.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium bifidum S17] gi|311063912|ref|YP_003970637.1| peptide chain release factor 2 (RF-2) PrfB [Bifidobacterium bifidum PRL2010] gi|313139738|ref|ZP_07801931.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB 41171] gi|309250976|gb|ADO52724.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium bifidum S17] gi|310866231|gb|ADP35600.1| PrfB Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium bifidum PRL2010] gi|313132248|gb|EFR49865.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB 41171] Length = 375 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 142/353 (40%), Positives = 206/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D + +++ L T+ P LW + A+ + + + E Sbjct: 12 EARSKYESIAKALDIERLKSQIATLETEAAKPGLWDDPENAQKVTSRLSAAQAQLKRLNE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+ELA EE D L E + I E++ + ++LL GE D A + + Sbjct: 72 ANRRIEDVETLVELAQEEADADSLSEAQSEIGSIAQELDDMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 311 GDIKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDAFIEAGIRWR 363 >gi|7404432|sp|O51101|RF2_BORBU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 359 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 156/360 (43%), Positives = 226/360 (62%), Gaps = 12/360 (3%) Query: 3 LSRQLNCL--------GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 + ++N L LFD + ++ + + W + A+ +++ + L N Sbjct: 1 MKEKINTLLKHAEDIWRKLFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKN 60 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 I +E+ +++ D L E+A E D + L+ ++ + + S E D+ Sbjct: 61 KIDPWEELINKIKDLSDLCEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDA 117 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N+A+L +H+GAGGTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG Sbjct: 118 NNAFLTIHSGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKG 176 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 AYG LK E G+HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYR Sbjct: 177 EYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYR 236 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E Sbjct: 237 ASGAGGQHVNKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDE 296 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +K EI WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 297 KNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 356 >gi|284040585|ref|YP_003390515.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74] gi|283819878|gb|ADB41716.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74] Length = 358 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 155/349 (44%), Positives = 228/349 (65%), Gaps = 3/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D+DN ++L+ L +T P W + A+ +M++ + L + +++ Sbjct: 9 LRARVEALRGYLDYDNKKEQLAELEQQTFQPEFWTDAARAEGVMKQVRGLKGWTTGYEKL 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E D + +++ +E + + +L E D A LE++ Sbjct: 69 NSQFGDLETLFEFYEAGDVTEEEVDEEG--RKVTTTLEELELKKMLGNEEDQLSAVLEIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA+ML RMY RWAEK + + ++ +G+ AGIKSAT+ + GP AYG+LK Sbjct: 127 AGAGGTESQDWADMLYRMYMRWAEKHGYGLKQVDYQEGDTAGIKSATIEVDGPLAYGFLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S++ YP++DD+I IE++ +D DT+R+ GAGGQ+ Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFASVYAYPLIDDTINIEVNPADIDWDTFRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H P+G++++CQQERSQ +NK A +L++KLYE+E+QKR E+S Sbjct: 247 VNKVETAVRLKHKPSGLIIECQQERSQLQNKEVAIRLLKSKLYEIEVQKRNAARAEVEAS 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYVL + VKD RT + ++ VLDGDLD F+KA L Sbjct: 307 KQKIEWGSQIRSYVLDD-RRVKDHRTGYQTSNTEAVLDGDLDPFIKAFL 354 >gi|224419024|ref|ZP_03657030.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|253827969|ref|ZP_04870854.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|313142536|ref|ZP_07804729.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|253511375|gb|EES90034.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|313131567|gb|EFR49184.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] Length = 363 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 175/350 (50%), Positives = 232/350 (66%), Gaps = 4/350 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + R+ + + + W++ +A +E++ + KE Sbjct: 12 ELEIKRQNIEKIMQPSQLQSRIEEIESLEQQKEFWEDSKKAGEYQKEKKRCLRQLEKYKE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 L D L EL+ DD L E + ++ +++ + E +LSGE DSN+A + Sbjct: 72 ASLALSDAKELFELS--SDDEETLNELFNEAPMLEEQIKKAEIEVMLSGELDSNNAIFTI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTESQDWA+ML RMY RWAE+ FK E L+ +G+EAGIK A+ +IKG NAYG+ Sbjct: 130 TPGAGGTESQDWASMLYRMYLRWAERCGFKVELLDYQEGDEAGIKDASFIIKGENAYGYT 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DSN++RHTSF+S+ V P +DD+I IEI E D RIDTYRASGAGGQ Sbjct: 190 KVENGIHRLVRISPFDSNAKRHTSFASVQVTPEIDDNISIEIEEKDLRIDTYRASGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T+SA+RITHIPTG+VVQCQ +RSQHKNKA A ML++KLYELE QKR E I Sbjct: 250 HINKTESAIRITHIPTGIVVQCQNDRSQHKNKATALKMLKSKLYELEQQKRNE--QIAND 307 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKDLR+NI ++ +LDGD+D ++ L Sbjct: 308 DKSEIGWGHQIRSYVLAPYQQVKDLRSNIAYSNVEAILDGDIDSILEGVL 357 >gi|148378178|ref|YP_001252719.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 3502] gi|148287662|emb|CAL81727.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 3502] Length = 325 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 148/323 (45%), Positives = 215/323 (66%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ EEDD + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEMLSEEDD-DMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+ GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSEVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322 >gi|297159934|gb|ADI09646.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1] Length = 383 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 160/353 (45%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + +L + +E+ Sbjct: 26 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKITSRLSYLQGQLRKAEEL 85 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA EDD E L ++ V+ + +LLSGE DS +A + + Sbjct: 86 RSRIDDLEVLFELADAEDDADARAEAVAELDSVRKAVDEMEVRTLLSGEYDSREALVNIR 145 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE + EEAGIKS T ++ P AYG L Sbjct: 146 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEVYDTSYAEEAGIKSTTFAVQIPYAYGTLS 205 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ RID YR+SG GGQ Sbjct: 206 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEKTDHIEIDESELRIDVYRSSGPGGQG 265 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 266 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD 325 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG+LD F++A + +K Sbjct: 326 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 377 >gi|116072022|ref|ZP_01469290.1| peptide chain release factor 2 [Synechococcus sp. BL107] gi|116065645|gb|EAU71403.1| peptide chain release factor 2 [Synechococcus sp. BL107] Length = 356 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 145/342 (42%), Positives = 203/342 (59%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + + + + + D Sbjct: 3 RTVFDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLKQLADWRSAIDDAK 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E L ++ ++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYELEADEDMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE + EI +GEEAGIKSAT+ ++G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ I V P +++ ++I+I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RIQHLPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YV PYQMVKDLRT E V+DG LD F+ A+L Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASLR 344 >gi|262377202|ref|ZP_06070427.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145] gi|262307940|gb|EEY89078.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145] Length = 310 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 170/308 (55%), Positives = 222/308 (72%), Gaps = 1/308 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N ++ + + +L D LL+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVLNVLDRLSTQLEDAQALLDLAVEADDESLLEDVQAELSTAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + + D N YLE+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E DG+ AG Sbjct: 61 RRMFNNPMDPNPCYLEIQAGSGGTEAQDWASMLLRMYLRWIERHGFKAEVMEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEIEI+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+ KR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATLA 352 F++A+L Sbjct: 300 KFIEASLK 307 >gi|332673011|gb|AEE69828.1| peptide chain release factor RF2 [Helicobacter pylori 83] Length = 385 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 35 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 94 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 95 KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 154 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 155 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 214 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 215 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 274 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 275 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 332 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 333 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384 >gi|315586172|gb|ADU40553.1| peptide chain release factor RF2 [Helicobacter pylori 35A] Length = 385 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 35 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 94 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 95 KNSLDESAELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 154 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 155 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 214 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 215 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 274 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 275 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 332 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 333 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384 >gi|116329128|ref|YP_798848.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330263|ref|YP_799981.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281974|sp|Q04V47|RF2_LEPBJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|122283090|sp|Q04YD0|RF2_LEPBL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116121872|gb|ABJ79915.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123952|gb|ABJ75223.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 367 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 165/351 (47%), Positives = 228/351 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + RL LN K+EDP LW N EA+++ +++ L+ ++ Sbjct: 15 ELQENFLNRWKLLNLEQDKDRLKALNEKSEDPDLWNNPEEARIVSQKKNELEKKLTPWFT 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 IQ + D L+EL L+E + + E S R++ + E + L D A+L + Sbjct: 75 IQQDILDFPDLVELTLDEKGENGIGELSMEYNRLQEKFEELELLGALKNSEDLKPAFLNI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY R+ EK+ ++ ++I G+ AGIK+ TL + G A+G+L Sbjct: 135 HPGAGGTESQDWAEMLLRMYIRYFEKKGYQYSLIDIQAGDGAGIKNVTLHVVGDFAFGFL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G+HRLVRISP+D+N RRHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQ Sbjct: 195 KGENGIHRLVRISPFDANKRRHTSFVSVHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G+VV CQ ERSQ KN+ A+ ML+A+LYE+E +K +E Sbjct: 255 HVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLKARLYEMEQEKAKEELEKKSG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYV PY +VKD RT+ E + + V+DGD++ F+ A L Sbjct: 315 EKKDIAWGSQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365 >gi|227494927|ref|ZP_03925243.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436] gi|226831379|gb|EEH63762.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436] Length = 372 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 150/355 (42%), Positives = 222/355 (62%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D R++ L+ K P LW N A+ + E H + I+++ Sbjct: 12 LRGTLENIIAVTRPDELKARIAELSEKAAVPDLWDNPEAAQAVTSELSHTQAELGRIEKM 71 Query: 63 QDRLCDNLILLELALEEDDCS--ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +R+ D ++E+A E+ D +L+E +L I+ + + ++LLSGE D A + Sbjct: 72 VERIDDLETIVEMAEEDLDEKDLLLEEAEADLAGIRQALADLEIKTLLSGEYDERSAVVT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGG ++ D+A MLLRMY RWAE+ + T+ ++ EEAG+KSAT + P AYG Sbjct: 132 IRAGAGGVDAADFAEMLLRMYLRWAERNGYPTKVMDTSYAEEAGLKSATFEVNAPYAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ +ID +R+SG GG Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKIDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L +L + E+ A Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLQL-RHEEEQAAKKAL 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVLQPYQMVKDLRT+ E + V DG++DDF+ A + +K Sbjct: 311 AGDVKASWGDQMRSYVLQPYQMVKDLRTSHENGNTGAVFDGEIDDFINAGIRWRK 365 >gi|21909990|ref|NP_664258.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS315] gi|21904179|gb|AAM79061.1| putative peptide chain release factor 2 [Streptococcus pyogenes MGAS315] Length = 326 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 208/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +Q+ + +LLE+ ++D + +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEML--DEDDFLKEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +NL ++ + LLS D N+A LE+H G+GGTE+QDW ++LLRMYTR+ Sbjct: 59 ENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG+++ F+ A L + Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323 >gi|78185691|ref|YP_378125.1| peptide chain release factor 2 [Synechococcus sp. CC9902] gi|78169985|gb|ABB27082.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus sp. CC9902] Length = 356 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 145/342 (42%), Positives = 203/342 (59%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + + + + + D Sbjct: 3 RTVFDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLADWRSAIDDAK 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E L ++ ++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYELEADEEMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE + EI +GEEAGIKSAT+ ++G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ I V P +++ ++I+I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RIQHLPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YV PYQMVKDLRT E V+DG LD F+ A+L Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASLR 344 >gi|42518772|ref|NP_964702.1| peptide chain release factor 2 [Lactobacillus johnsonii NCC 533] gi|41583058|gb|AAS08668.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii NCC 533] Length = 332 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 149/324 (45%), Positives = 209/324 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ + + K+++ + D LEL + D + +E S Sbjct: 1 MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A Sbjct: 61 EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAVSHD 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG++ Q +RSQ Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIITSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NMLRAKL++LE +K+ + + ++ EIG+G QIRSYV PY MVKD RTN Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DG LD+F+ A L Sbjct: 301 FETSDVNGVMDGKLDNFIYAYLQW 324 >gi|254445589|ref|ZP_05059065.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235] gi|198259897|gb|EDY84205.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235] Length = 368 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 156/354 (44%), Positives = 212/354 (59%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + GG+FD D + L + W + A+ ++ + ++ + Sbjct: 1 MKSEPDTYGGIFDVDKKKTEIGELEAQMSAEGFWNDQKAAQAVIAQANLAKGVVNGMTAF 60 Query: 63 QDRLCDNLILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 +L D + EL EE + +E +K E++ + + L+ D +A L Sbjct: 61 MAKLDDARAMEELLNEEGVDELSDEAEELQAAAVALKEELDELEIQCYLNKPHDRCNALL 120 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 V+AGAGGTES DWA +L RMY+RWAE+R FK E +++ GEEAG+ TL I G NA+G Sbjct: 121 SVNAGAGGTESCDWAELLYRMYSRWAERRGFKVEVVDMLPGEEAGLDKVTLRIVGENAFG 180 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 + E+GVHRLVRISP+DS RRHTSF ++ V ++D IEIEI D R DTYR+SG G Sbjct: 181 YANAERGVHRLVRISPFDSQKRRHTSFCAVDVVAEIEDDIEIEIEAKDLREDTYRSSGKG 240 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN TDSAVR+THIPTG+V CQ +RSQHKN++ A ML+A+LYE ++ Sbjct: 241 GQHVNKTDSAVRLTHIPTGIVAACQSDRSQHKNRSAAMKMLKARLYERMEDEKRSAMEKM 300 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K EIGWG QIRSYV QPYQMVKDLRT +E + V+DGD+D F+ L Sbjct: 301 YGEKGEIGWGNQIRSYVFQPYQMVKDLRTGVETGNIQAVMDGDIDRFVSGWLRA 354 >gi|57238478|ref|YP_179609.1| peptide chain release factor 2 [Campylobacter jejuni RM1221] gi|73621535|sp|Q5HSX6|RF2_CAMJR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|57167282|gb|AAW36061.1| peptide chain release factor 2 [Campylobacter jejuni RM1221] gi|315058910|gb|ADT73239.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni S3] Length = 365 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 167/349 (47%), Positives = 228/349 (65%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--TGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|296114415|ref|ZP_06833069.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC 23769] gi|295979176|gb|EFG85900.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC 23769] Length = 322 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 193/309 (62%), Positives = 247/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L N I +++++ + D + L+ELA E D ++ E L+ + E + ++ E Sbjct: 1 MRERTLLANQIEGVQKLEGDVRDTIELVELAEMEGDGDVVAEGVLALRALAEEAKRRETE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K +E +GE+AG+ Sbjct: 61 SLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTLMESSEGEQAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEI+I+E Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A A ML+A++Y Sbjct: 181 ADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMAMLKARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ+RE A E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+P VLDGDLDD Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTNMEKTNPGAVLDGDLDD 300 Query: 346 FMKATLAIK 354 FM A+LA + Sbjct: 301 FMAASLAAQ 309 >gi|169634751|ref|YP_001708487.1| peptide chain release factor 2 [Acinetobacter baumannii SDF] gi|169153543|emb|CAP02711.1| peptide chain release factor 2 [Acinetobacter baumannii] Length = 310 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 169/308 (54%), Positives = 224/308 (72%), Gaps = 1/308 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E K++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDLKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATLA 352 F++A+L Sbjct: 300 RFIEASLK 307 >gi|183602511|ref|ZP_02963876.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis HN019] gi|219683556|ref|YP_002469939.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis AD011] gi|241190585|ref|YP_002967979.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195991|ref|YP_002969546.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218152|gb|EDT88798.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis HN019] gi|219621206|gb|ACL29363.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis AD011] gi|240248977|gb|ACS45917.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250545|gb|ACS47484.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178324|gb|ADC85570.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium animalis subsp. lactis BB-12] gi|295793572|gb|ADG33107.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis V9] Length = 377 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 144/351 (41%), Positives = 210/351 (59%), Gaps = 1/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + D D + + L + P LW + A+ +M + + + + Sbjct: 14 RAKYESIALALDTDRLKSQEAELEQQASAPGLWDDSEHAQKVMSQLSACQSQLKHLSSAA 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 RL D L+EL EE+D L E ++ I+ +++ + E+L+ GE DS A + + + Sbjct: 74 SRLDDVATLIELGQEENDADTLHEAQTEIESIQKDLDQMEIETLMDGEYDSRSAVVTIRS 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT I P AYG + Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQIDAPYAYGRMSV 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HRLVRISP+D+ RR TSF+++ V P+V+ + IE+ +S+ R+DTY ASG GGQ V Sbjct: 194 EGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIEVPDSEIRVDTYCASGPGGQGV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L + E + Sbjct: 254 NTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVL-RHEEEAKKKKELAGD 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D+F++A + + Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDEFIQAGIRWR 363 >gi|86149455|ref|ZP_01067686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151896|ref|ZP_01070109.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 260.94] gi|88596537|ref|ZP_01099774.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 84-25] gi|148925627|ref|ZP_01809315.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8486] gi|205356111|ref|ZP_03222878.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8421] gi|218563058|ref|YP_002344837.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315124892|ref|YP_004066896.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|24638160|sp|Q9PMK5|RF2_CAMJE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|85840237|gb|EAQ57495.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841004|gb|EAQ58253.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 260.94] gi|88191378|gb|EAQ95350.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360764|emb|CAL35563.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845637|gb|EDK22728.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8486] gi|205345954|gb|EDZ32590.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8421] gi|284926663|gb|ADC29015.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni IA3902] gi|315018614|gb|ADT66707.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315927400|gb|EFV06738.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930833|gb|EFV09825.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 305] Length = 365 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--TGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|157415680|ref|YP_001482936.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81116] gi|172047182|sp|A8FNC2|RF2_CAMJ8 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157386644|gb|ABV52959.1| peptide chain release factor RF-2 [Campylobacter jejuni subsp. jejuni 81116] gi|307748321|gb|ADN91591.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni M1] gi|315930963|gb|EFV09938.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 327] Length = 365 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 230/353 (65%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN G Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANAG--E 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|262280476|ref|ZP_06058260.1| peptide chain release factor 2 [Acinetobacter calcoaceticus RUH2202] gi|262258254|gb|EEY76988.1| peptide chain release factor 2 [Acinetobacter calcoaceticus RUH2202] Length = 310 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 168/308 (54%), Positives = 224/308 (72%), Gaps = 1/308 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATLA 352 F++A+L Sbjct: 300 RFIEASLK 307 >gi|325123846|gb|ADY83369.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2] Length = 310 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 168/308 (54%), Positives = 225/308 (73%), Gaps = 1/308 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRA+L Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATLA 352 F++A+L Sbjct: 300 RFIEASLK 307 >gi|148255578|ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobium sp. BTAi1] gi|146407751|gb|ABQ36257.1| bacterial peptide chain release factor 2 (bRF-2) [Bradyrhizobium sp. BTAi1] Length = 323 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 201/309 (65%), Positives = 248/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L DN+ ++EL E+D ++ E + L+ +K +V ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERDLSDNIEMIELGEAENDAGVVTEAENALKALKKDVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA MLLRMYTRWAEK FK E LE GEEAGI Sbjct: 61 ALLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|313207347|ref|YP_004046524.1| bacterial peptide chain release factor 2 (brf-2) [Riemerella anatipestifer DSM 15868] gi|312446663|gb|ADQ83018.1| bacterial peptide chain release factor 2 (bRF-2) [Riemerella anatipestifer DSM 15868] gi|315023242|gb|EFT36252.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM] gi|325335194|gb|ADZ11468.1| Protein chain release factor B [Riemerella anatipestifer RA-GD] Length = 376 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 151/353 (42%), Positives = 234/353 (66%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +S++++ L D ++ + KT P W N EA++ +++ + + +E Sbjct: 15 NISQRVSDLHKYLQIDKKKLEITNDDEKTAAPEFWDNPKEAEVFLKQLRSKKKWVEDYEE 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I L D +L+E A E+ D + QE + +VE +F+++LS E D A L++ Sbjct: 75 IHTGLEDLQVLIEFAKEDPDSA--QELETAYPTLLEKVENLEFKNMLSNEGDELSAVLQI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTES DWA+ML+RMY WA+K +K + L +G+ AG+K+ TL I+G A+G+L Sbjct: 133 TAGAGGTESCDWASMLMRMYLMWADKNGYKVKELNFQEGDVAGVKTVTLEIEGEYAFGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI I+ +D +T RASGAGGQ Sbjct: 193 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEININPADISFETMRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVR+ H PTG++++ + RSQ +NK +A +L+++LYE+EL++R N E+ Sbjct: 253 NVNKVETAVRLRHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMRARNEIEA 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K +I WG QIR+YV+ PY++VKD+R+ E + V++G++ F+KA L Sbjct: 313 NKMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGEITPFLKAYLMAD 365 >gi|86133579|ref|ZP_01052161.1| peptide chain release factor 2 [Polaribacter sp. MED152] gi|85820442|gb|EAQ41589.1| peptide chain release factor 2 [Polaribacter sp. MED152] Length = 367 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 148/351 (42%), Positives = 229/351 (65%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S +++ L + D + ++ KT +P W + A+++M+E + + I Sbjct: 10 ISTRIDKLKSYLEIDKKLIEIANEEEKTANPDFWNDPKAAELVMKELRFKKKWVEDYNTI 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D ++ E E D + ++ ++ +E +F+++LS E DS A +++ Sbjct: 70 IRLNEDLIVFYEFYKE--DEADEKDVVQQYEKTIALLEDIEFKNMLSDEGDSLSAVIQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML RMYT W+EK+ FK + L G+ AGIK+ T+ ++G A+GWLK Sbjct: 128 AGAGGTESCDWAEMLFRMYTMWSEKQGFKLKTLNYQAGDAAGIKTVTVEVEGDYAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYPV DDSIEI+I+ +D I T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPVADDSIEIDINPADIEITTARSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH P+G+ + C RSQH N+A A ML+++LYE+ELQK++ + E++ Sbjct: 248 VNKVETKVQLTHKPSGIQISCSNSRSQHDNRATAMQMLKSQLYEIELQKQQAARDDIEAN 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + WG QIR+YV+ PY++VKD+RT E + V+DG+++ F+KA L + Sbjct: 308 KMKNEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMDGNINAFLKAYLML 358 >gi|182438348|ref|YP_001826067.1| peptide chain release factor 2 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778999|ref|ZP_08238264.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1] gi|238688991|sp|B1VV08|RF2_STRGG RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|178466864|dbj|BAG21384.1| putative peptide chain release factor 2 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659332|gb|EGE44178.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1] Length = 368 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D E L+ ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAADEGDADAQAEAEAELESVRKALDEMEVRTLLSGEYDAREALVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364 >gi|269925864|ref|YP_003322487.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum terrenum ATCC BAA-798] gi|269789524|gb|ACZ41665.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum terrenum ATCC BAA-798] Length = 372 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 161/351 (45%), Positives = 224/351 (63%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L +++ D +N + L + LW + EA+ +M+ L + + + Sbjct: 11 NLRERISTFKEHLDLENKRLEIEKLEQRAASSELWADPAEAQKVMKNLNDLKDQLEVWSK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ RL D +LL+LA EED S E + ++ ++ ++ + + E LLSG D DA + + Sbjct: 71 IERRLEDAEVLLDLAYEEDSASDFHEAASQIRALENQLNHLELELLLSGSYDQEDAIIAI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HA GG ++QDWA+ML+RMY RWA++R ++ E + +GEEAG KSAT+ IKG AYG+ Sbjct: 131 HAREGGIDAQDWASMLVRMYLRWAQRRGWQAELVSSIEGEEAGYKSATIEIKGKYAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G HRLVR+SP+D RRHTSF+ + V P V+++ E++I E D +IDTYRAS AGGQ Sbjct: 191 KAEAGQHRLVRLSPFDQAHRRHTSFALVEVLPDVEETPEVQIREEDLKIDTYRASSAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVRITHIPTG+VV CQ ERSQ +NK A +LRA+L ELEL+++ E + Sbjct: 251 HVNKTSSAVRITHIPTGIVVTCQNERSQFQNKETALKILRARLLELELRRQAEEQARLKG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL PY MVKD RT E + VLDG++D F++A L+ Sbjct: 311 EHIATGWGSQIRSYVLHPYTMVKDHRTGYEVSDVESVLDGEIDPFIEAYLS 361 >gi|71276052|ref|ZP_00652333.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon] gi|71899474|ref|ZP_00681632.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1] gi|170729664|ref|YP_001775097.1| peptide chain release factor 2 [Xylella fastidiosa M12] gi|71163135|gb|EAO12856.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon] gi|71730787|gb|EAO32860.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1] gi|167964457|gb|ACA11467.1| peptide chain release factor RF-2 [Xylella fastidiosa M12] Length = 338 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 170/328 (51%), Positives = 234/328 (71%), Gaps = 1/328 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + + E P +W A+ L RER LD ++ I + + + + L+LA E D +L Sbjct: 1 MTRELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEML 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 Q +++ +L+VE +F+ + SG+ D +A++++ AGAGGTE+QDWA MLLRMY RWA Sbjct: 61 QAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E R +K E LE+ GE AGIKSAT ++G AYGWLK E GVHRLVR SP+DS++RRHTS Sbjct: 121 EGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ Sbjct: 181 FTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQT 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH N+ +A ML AKLYE E+QKR ++ E+SK++IGWG QIR+YVL +KD Sbjct: 241 ERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVL-DQSRIKD 299 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353 LRT +E++ VLDGDLD+F++A+L Sbjct: 300 LRTGVERSDTQKVLDGDLDEFIEASLKA 327 >gi|15896100|ref|NP_349449.1| peptide chain release factor 2 [Clostridium acetobutylicum ATCC 824] gi|15025890|gb|AAK80789.1|AE007782_3 Protein chain release factor B [Clostridium acetobutylicum ATCC 824] gi|325510254|gb|ADZ21890.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018] Length = 329 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 153/322 (47%), Positives = 216/322 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P W +V A+ + E + L I I+ R+ D+ +L+E+ E+++ E Sbjct: 1 MQEPDFWNDVKRAQEISMEIKFLKGRIDRFNSIESRIEDDNVLIEMCREDENEEEADEIL 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + EV+ + E +LSGE D N+A L +H G GGT++QDW MLLRMYTRWAE + Sbjct: 61 KEVRDLHEEVDNFKIEIILSGEYDRNNAILNLHTGVGGTDAQDWTQMLLRMYTRWAEAKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK + +++ G+EAGIKS ++ I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 121 FKVDIIDMLPGDEAGIKSVSINIDGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + S +I I D ++DTYRASGAGGQHVN T+SAVRITH+PTG+VVQCQ ERSQ Sbjct: 181 EVLPQLTQSQDIVIRPEDLKVDTYRASGAGGQHVNKTESAVRITHLPTGIVVQCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A NML++KL EL+ + +E ++GWG QIRSYV QPY MVKD RT Sbjct: 241 HSNKETAMNMLKSKLVELKERMHKEKVEDLAGELKDMGWGNQIRSYVFQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E ++ V+DG++D F+ L Sbjct: 301 VETSNVDAVMDGEIDKFIIEYL 322 >gi|15837713|ref|NP_298401.1| peptide chain release factor 2 [Xylella fastidiosa 9a5c] gi|9106068|gb|AAF83921.1|AE003947_1 peptide chain release factor 2 [Xylella fastidiosa 9a5c] Length = 338 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 170/328 (51%), Positives = 234/328 (71%), Gaps = 1/328 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 + + E P +W A+ L RER LD ++ I + + + + L+LA E D +L Sbjct: 1 MTRELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEML 60 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 Q +++ +L+VE +F+ + SG+ D +A++++ AGAGGTE+QDWA MLLRMY RWA Sbjct: 61 QAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWA 120 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E R +K E LE+ GE AGIKSAT ++G AYGWLK E GVHRLVR SP+DS++RRHTS Sbjct: 121 EGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTS 180 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ Sbjct: 181 FTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQT 240 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH N+ +A ML AKLYE E+QKR ++ E+SK++IGWG QIR+YVL +KD Sbjct: 241 ERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVL-DQSRIKD 299 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353 LRT +E++ VLDGDLD+F++A+L Sbjct: 300 LRTGVERSDTQKVLDGDLDEFIEASLRA 327 >gi|223558105|gb|ACM91108.1| peptide chain release factor 2 [uncultured bacterium Rlip2] Length = 330 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ L +E L + + + D + L E+ +EE D + + Sbjct: 1 MGAPDFWDDAEAAQALNQELADLKGGVDTYNALVAKTDDLMTLWEMGMEEKDEGVEADVK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +K E+ + E LLSGE D+N+AYLE+HAGAGGTE+QDW MLLRMY RWAE+ Sbjct: 61 AEYDSLKNELRSLELELLLSGEYDANNAYLELHAGAGGTEAQDWTQMLLRMYGRWAERHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L++ G+EAG+KS L +KG NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+ Sbjct: 121 FSVETLDLQPGDEAGVKSVMLFVKGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSAC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++D+ E+EI D R+DTYR+SGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPEMEDAKEVEIDMDDVRVDTYRSSGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ MLRAKL+ELE +K+EE E + +I WG QIRSYV QPY MVKD RT Sbjct: 241 IQNREVCLRMLRAKLFELEEKKKEEERAKLEGVQQKIEWGSQIRSYVFQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+++ LA K Sbjct: 301 EETGNVQAVMDGEIDPFIESFLAAK 325 >gi|254508224|ref|ZP_05120348.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16] gi|219548841|gb|EED25842.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16] Length = 320 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 168/317 (52%), Positives = 227/317 (71%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ + I +++ + D LLELA+EE+D E L + Sbjct: 2 WNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++E +F + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE + Sbjct: 62 EAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVI 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP + Sbjct: 122 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Q Sbjct: 182 DDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A LRAKL+ELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS-RIKDLRTGVENRNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLK 317 >gi|303327864|ref|ZP_07358304.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3] gi|302862225|gb|EFL85159.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3] Length = 366 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 160/348 (45%), Positives = 220/348 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GG+FD ++ QRL + T+ P W +++E++ L++ + + ++ Sbjct: 14 LTTFGGVFDVASSEQRLRDIETELSRPGAWDKPEALTPVLQEKRRLEDEVGRLTRLKTCR 73 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L LA E +D L+ + + ++ + LLS E D DA LE+H GAG Sbjct: 74 DDMEEWLVLASENEDQEALESLEQQQKELAALLDETELVMLLSAEEDGQDAILEIHPGAG 133 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA MLLR+YTRWA +RK+ E ++ G+EAGIKS TL I GP+A+G+LK E+G Sbjct: 134 GTESQDWAEMLLRLYTRWAARRKYAVEEMDFLPGDEAGIKSVTLRISGPHAFGFLKSERG 193 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRL+RISP+D++ RRHTSF+S+ V P + I+++I ESD R D +R+SG GGQ VNTT Sbjct: 194 IHRLIRISPFDASGRRHTSFASVDVIPDAGNDIQLDIKESDLRFDIFRSSGPGGQSVNTT 253 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+ QCQ E+SQH NK A +LRA+LY LELQKRE + K I Sbjct: 254 SSAVRVTHLPTGISAQCQNEKSQHHNKETALRVLRARLYNLELQKREAERQAEYAGKDAI 313 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +G QIR+Y LQPY++VKD RT E VLDG +D F L + Sbjct: 314 AFGSQIRTYTLQPYRLVKDHRTGSESGDVDAVLDGQIDQFQHDYLLYR 361 >gi|257069176|ref|YP_003155431.1| peptide chain release factor 2 [Brachybacterium faecium DSM 4810] gi|256559994|gb|ACU85841.1| bacterial peptide chain release factor 2 (bRF-2) [Brachybacterium faecium DSM 4810] Length = 371 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 142/353 (40%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L+ + + D D +++ L + LW +V A+ + H + I E Sbjct: 12 QLRSTLSSIEQVTDIDALDAKIADLEKQASAQDLWDDVDNAQKVSSALSHAQSERRRISE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D ++++LA EEDD L+E + L I ++ + +LLSGE D DA + + Sbjct: 72 LDSRIEDLEVMVQLAAEEDDADTLEEAENELVSIHKTLDELEVRTLLSGEYDERDAVITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A ML+RMY RWAE+ + T+ ++ EEAG+KS T + P AYG L Sbjct: 132 RAGAGGVDAADFAEMLMRMYLRWAERHGYATKVMDTSHAEEAGLKSVTFEVSAPFAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI E+D ++D +R+SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDSIEIPENDLKVDVFRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG VV Q E+SQ +N+A A +++++L L+ + Sbjct: 252 SVNTTDSAVRMTHLPTGTVVSMQDEKSQIQNRAAALRVMQSRLLLLKKAEEAAERKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT+ ++ +PS V DG++D+F+ A + + Sbjct: 312 DV-KASWGDQMRSYVLNPYQMVKDLRTDYQEGNPSSVFDGEIDEFIDAGIRWR 363 >gi|54294665|ref|YP_127080.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens] gi|53754497|emb|CAH15981.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens] Length = 335 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + E ++W N +A+ L RER L+ + + ++ + D L ELA EEDD Sbjct: 2 EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQSELFELAREEDDEQ 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + + + L+ I+ +V +F + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R Sbjct: 62 TINDIGEELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E F TE +E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRH Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVL-DQSRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E ++ VLDG LD F++A+L Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330 >gi|120555185|ref|YP_959536.1| peptide chain release factor 2 [Marinobacter aquaeolei VT8] gi|120325034|gb|ABM19349.1| bacterial peptide chain release factor 2 (bRF-2) [Marinobacter aquaeolei VT8] Length = 310 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 175/309 (56%), Positives = 229/309 (74%), Gaps = 1/309 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ + I + + L D LL++A+EEDD +QE +L+ + E+E +F Sbjct: 1 MGKERSDLELIVKTIDNLTNGLADAESLLDMAVEEDDEGTVQEIEADLENLDKELEKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE D+N+AYL++ AG+GGTE+QDW NMLLRMY RWAE+R FK E +E+ +GE AG Sbjct: 61 RRMFSGEMDANNAYLDIQAGSGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ I+G AYGWL+ E GVHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ Sbjct: 121 IKSATIHIQGDYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D R+D YRASGAGGQHVN T+SAVR+TH PTG+VV CQ RSQH+NK QA L+AKL Sbjct: 181 PADLRVDVYRASGAGGQHVNRTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +ELE+QKR E E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGD+D Sbjct: 241 FELEMQKRNEEKQKAEDSKSDIGWGSQIRSYVLDDS-RIKDLRTKVETSNTQSVLDGDID 299 Query: 345 DFMKATLAI 353 F++A+L + Sbjct: 300 KFIEASLKM 308 >gi|153952316|ref|YP_001398744.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei 269.97] gi|166223625|sp|A7H5G4|RF2_CAMJD RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|152939762|gb|ABS44503.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei 269.97] Length = 365 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 228/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPKNIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D LQ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDIETLQALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANSS--E 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|299768411|ref|YP_003730437.1| peptide chain release factor 2 [Acinetobacter sp. DR1] gi|298698499|gb|ADI89064.1| peptide chain release factor 2 [Acinetobacter sp. DR1] Length = 310 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 167/308 (54%), Positives = 224/308 (72%), Gaps = 1/308 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSAAEDELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRA+L Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATLA 352 F++A+L Sbjct: 300 RFIEASLK 307 >gi|326491925|dbj|BAJ98187.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 465 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 153/351 (43%), Positives = 226/351 (64%), Gaps = 1/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ + + W ++R L E P LW++ + A + RE+ L I + + + Sbjct: 106 AQSIRLIKKRLKWKWLLERSKQLAVVLEKPDLWEDPVFAGKVSREQGELMGKIKSVNQFE 165 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 +L +++ +L LA +E D + E+ L ++ E + K+ +LLSG+ D ++EV A Sbjct: 166 QQLMEHIDMLRLARDEGDNELETESMRALADMRREAKEKELNALLSGDNDPYPCFIEVQA 225 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ES DWA M++ MY WA++R ++ +E GE AGIK AT+ + G A+G+ K Sbjct: 226 GAGGVESMDWAAMVMNMYKSWAQRRGYRVTVIEEMPGELAGIKRATIKVDGEYAFGYAKS 285 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+++ V P++ +S +I+ESD RI+ +R+ G GGQH Sbjct: 286 EIGVHRLVRISPFDSGKRRHTSFAAVAVIPILGESSSRYQINESDLRIERFRSGGPGGQH 345 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 NTT+SAVRI HIPTG CQ ERSQH N+A A +L+++L +LE+ ++ ++ S Sbjct: 346 ANTTESAVRIVHIPTGTTATCQNERSQHMNRASAMAVLQSRLDQLEITRQAQMNAEHTQS 405 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +EI WG QIRSYVLQPY+MVKDLRTN E + P VL+GDLDDF+ + L++ Sbjct: 406 LSEISWGNQIRSYVLQPYRMVKDLRTNYEVSDPDSVLEGDLDDFILSFLSL 456 >gi|83858490|ref|ZP_00952012.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633] gi|83853313|gb|EAP91165.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633] Length = 316 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 200/309 (64%), Positives = 241/309 (77%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER LD +++ ++EI L D L L E+A E D + Q+ ++ L+ ++ + + Sbjct: 1 MRERNRLDQSMTEVQEIVADLADTLELAEMAEMEGDDDLYQDATEALKALRARAGKAELQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD ND+YLE+H GAGGTE+QDWA+ML RMYTRWAEK FK E +E GEEAG+ Sbjct: 61 ALLSGEADGNDSYLEIHPGAGGTEAQDWASMLARMYTRWAEKSGFKVEVIEAQAGEEAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T+L+KG NAYGWLK E GVHRLVRISPYDS+ RRHTSF+S+W YP+VDD+IEIEI + Sbjct: 121 KSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIED 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R+DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQHKN+A AW MLRA+LY Sbjct: 181 KDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRANAWTMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELELQKREE A SKT+IGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLDD Sbjct: 241 ELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDD 300 Query: 346 FMKATLAIK 354 FM A LA + Sbjct: 301 FMAAALAQR 309 >gi|221217380|ref|ZP_03588851.1| peptide chain release factor 2 [Borrelia burgdorferi 72a] gi|221192658|gb|EEE18874.1| peptide chain release factor 2 [Borrelia burgdorferi 72a] Length = 348 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 155/347 (44%), Positives = 222/347 (63%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 3 KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L E+A E D + L+ ++ + + S E D+N+A+L +H+GAGG Sbjct: 63 DLSDLFEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 238 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345 >gi|52842005|ref|YP_095804.1| peptide chain release factor 2 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148359322|ref|YP_001250529.1| peptide chain release factor 2 [Legionella pneumophila str. Corby] gi|296107369|ref|YP_003619069.1| Protein chain release factor B [Legionella pneumophila 2300/99 Alcoy] gi|52629116|gb|AAU27857.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148281095|gb|ABQ55183.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila str. Corby] gi|295649270|gb|ADG25117.1| Protein chain release factor B [Legionella pneumophila 2300/99 Alcoy] gi|307610478|emb|CBX00050.1| hypothetical protein LPW_18051 [Legionella pneumophila 130b] Length = 335 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + E ++W N +A+ L RER L+ + + ++ + D L ELA EEDD Sbjct: 2 EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQ 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + + + L+ I+ +V +F + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R Sbjct: 62 TINDIGEELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E F TE +E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRH Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVL-DQSRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E ++ VLDG LD F++A+L Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330 >gi|15618982|ref|NP_224772.1| peptide chain release factor 2 [Chlamydophila pneumoniae CWL029] gi|7388054|sp|P56906|RF2_CHLPN RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 369 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 163/360 (45%), Positives = 227/360 (63%), Gaps = 9/360 (2%) Query: 2 KLSRQLNCLG--------GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 L ++L L LFD D + L L ++ + + WQ+ + A + + L Sbjct: 4 NLDKRLEALRTEISLAARSLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLR 63 Query: 54 NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 I +E++ ++ LE A +D +I ++ + ++ + + LLSGEAD Sbjct: 64 RQIQEYQELKSKIDAIEFFLEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEAD 123 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 N +L ++AGAGGTES DW ML RMY+RWA K ++ E ++ DGE GIK T+ Sbjct: 124 KNSCFLTINAGAGGTESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFS 183 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G AYG+ K E+GVHRLVRISP+DSN +RHTSF+S+ V+P +DD I+IEI +D RIDT+ Sbjct: 184 GMYAYGYAKAERGVHRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTF 243 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQHVN T+SAVRITH+P+GVVV CQ ERSQ +N+ ML+AKLY+ LQ+R Sbjct: 244 RSSGAGGQHVNVTESAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERL 303 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 E ++ K EI WG QIR+YV QPY +VKD+RT E + +LDG+ LD+F+KA LA Sbjct: 304 EKQSLDRKDKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 363 >gi|319408605|emb|CBI82260.1| peptide chain release factor RF-2 [Bartonella schoenbuchensis R1] Length = 323 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 211/310 (68%), Positives = 256/310 (82%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +MRERQ L+++I+ I+ L + + L+ + EE D I+ + + ++++K E++ +Q Sbjct: 1 MMRERQCLEDSINGIRLFTQTLEECIELIAMGEEESDEEIITDAENTIRKLKSEIDKRQI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAG Sbjct: 61 DLLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYIRWAEQHKMKVEVLEIHDGEEAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+L+KG NAYG LK E GVHRLVRISP+DSN+RRHTSF+S+WVY VVDD+IEI+IS Sbjct: 121 IKSATILVKGHNAYGMLKTESGVHRLVRISPFDSNARRHTSFASVWVYSVVDDNIEIDIS 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ESD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+L Sbjct: 181 ESDIRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQVERSQHKNRATAWSMLRARL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE EL+KRE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P VL+G+LD Sbjct: 241 YEEELKKREAETNAIEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQTVLNGNLD 300 Query: 345 DFMKATLAIK 354 F++A LA + Sbjct: 301 AFIEAALAQR 310 >gi|332662344|ref|YP_004445132.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM 1100] gi|332331158|gb|AEE48259.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM 1100] Length = 358 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 155/350 (44%), Positives = 223/350 (63%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L LG D +N + ++ + DP W + A+ +++E + N ++ K Sbjct: 9 LRERLVSLGRYLDVENRLIQIEEQEQLSLDPTFWNDPKRAETILKELKSHKNWVAQYKAA 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D +LLE E + + +E +E +F + L+ D + LE++ Sbjct: 69 EAEVDDAEVLLEFNKEGE--ATEEEVDQKYAEALAVIEGLEFHTTLNQPEDELNVVLEIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY WA++R FK L DG+ AG+KSA++ I+G +G LK Sbjct: 127 AGAGGTEACDWAEMLYRMYMMWAQRRGFKFTELNRQDGDVAGLKSASIEIEGEYVFGLLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY+S +R TSFSS++V+P+VDDSIEIEI+ +D DT+RASGAGGQH Sbjct: 187 GENGVHRLVRVSPYNSQGKRMTSFSSVFVHPMVDDSIEIEINPADLEWDTFRASGAGGQH 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVR+ H+P+G+V +CQQERSQH N+ +A ML+++LYE EL+K++ ES Sbjct: 247 VNKTESAVRVRHLPSGIVAECQQERSQHMNRDKAMQMLKSRLYERELEKQKAEKETIESG 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K + WG QIRSYVL + VKD RT + + VL+GD+D+F+KA L Sbjct: 307 KMKNEWGSQIRSYVLDD-RRVKDHRTGYQTSQTDAVLNGDIDEFLKAFLM 355 >gi|206601601|gb|EDZ38084.1| Peptide chain release factor 2 [Leptospirillum sp. Group II '5-way CG'] Length = 370 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 170/346 (49%), Positives = 235/346 (67%), Gaps = 5/346 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD D L ++ +++ P W++ A+ ++RE+ L+ +S I+ I D Sbjct: 11 GGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQGIDREDADIR 70 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ELA D L E S + V+ + E +LS N A+LE+H GAGGTES Sbjct: 71 ALFELAS---DPDFLAELSRRVPEFSESVKAFELEEILSEAKSDNPAFLEIHPGAGGTES 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RWAE+ E ++I GEEAGIKSAT+L++G +A+G+L E G+HRL Sbjct: 128 QDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGYLMSESGIHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N RRHTSF+S++VYP ++D + +EI + D RIDT+RAS AGGQHVN T SA+ Sbjct: 188 VRISPFDANKRRHTSFTSVFVYPELEDDVPVEIRDEDIRIDTFRASSAGGQHVNKTSSAI 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--GESSKTEIGW 308 R+TH+PTG+V+ Q ERSQ +N+ A+ +LRAKLYELE ++++E + G +K +IGW Sbjct: 248 RLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKISGAQNKKDIGW 307 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYVLQPYQ++KD RT +E S+VLDGDLD F++ L + Sbjct: 308 GHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYLLAR 353 >gi|121612135|ref|YP_001001104.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81-176] gi|167005998|ref|ZP_02271756.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81-176] gi|166223626|sp|A1W163|RF2_CAMJJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|87249819|gb|EAQ72778.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81-176] Length = 365 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDANELFDLANSENDTETLEALFNDASKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--TGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|289525504|emb|CBJ14981.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis Sweden2] Length = 368 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 208/342 (60%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 D + L L + W +V A + L +S E+++++ Sbjct: 20 RRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQ 79 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LE D + +E + ++ + LLSGE D N +L ++AGAGGTES Sbjct: 80 FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 139 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW MLLRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K E GVHRL Sbjct: 140 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 199 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN++RHTSF S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAV Sbjct: 200 VRISPFDSNAKRHTSFVSVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 259 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI +K EI WG Sbjct: 260 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 319 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 320 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361 >gi|238754561|ref|ZP_04615915.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473] gi|238707192|gb|EEP99555.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473] Length = 310 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 172/309 (55%), Positives = 219/309 (70%), Gaps = 1/309 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ ++ I E+ L D LLELA+E DD E L+ + ++ +F Sbjct: 1 MGKERSSLEEIVTTIDELAQGLEDVSGLLELAIEADDEETFDEAVAELEILDGKLGQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG Sbjct: 61 RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 121 LKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE E+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 241 YEFEMQKKNADKQMLEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLD 299 Query: 345 DFMKATLAI 353 F++A+L Sbjct: 300 KFIEASLKA 308 >gi|312862769|ref|ZP_07723009.1| peptide chain release factor 2 [Streptococcus vestibularis F0396] gi|311101629|gb|EFQ59832.1| peptide chain release factor 2 [Streptococcus vestibularis F0396] Length = 337 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 152/336 (45%), Positives = 215/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ +E L +Q+ + + LE+ Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D SI +E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA+MLL Sbjct: 59 EEDDSIQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDACLKWR 334 >gi|208434124|ref|YP_002265790.1| peptide chain release factor RF-2 [Helicobacter pylori G27] gi|238054481|sp|B5Z9U4|RF2_HELPG RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|208432053|gb|ACI26924.1| peptide chain release factor RF-2 [Helicobacter pylori G27] Length = 363 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 244/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D + L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESVELFELAQNDNDETTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|300853467|ref|YP_003778451.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528] gi|300433582|gb|ADK13349.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528] Length = 329 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 154/326 (47%), Positives = 220/326 (67%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K ++P+ W ++ A+ + E + L+ + +++ R+ D IL +A EE+D S ++ Sbjct: 2 KMQEPNFWDHLERAQEVTSEEKFLNEKLDMYNKLESRINDAEILAHIAEEEEDVSDCKDI 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ I+ ++ + E LLSGE D N+A L +H G GGT++QDW MLLRMYTRWAEK Sbjct: 62 LSEVEDIENIIDKLKIEILLSGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYTRWAEKS 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K E L+I ++AGIKS +L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S Sbjct: 122 GYKVETLDILPADDAGIKSVSLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFAS 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P + +I+I D R+DTYR+SGAGGQHVN T+SAVRITHIPTG+VVQCQ ERS Sbjct: 182 VEVLPELTKDQDIDIRPEDLRVDTYRSSGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH N+ A ML++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 242 QHYNRETAMLMLKSKLVELKERAHKEKIEDLAGELKDMGWGSQIRSYVFHPYTLVKDHRT 301 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 +E + S V+DG++D+F+ A L + Sbjct: 302 GVENGNVSSVMDGEIDNFILAYLRQQ 327 >gi|110597266|ref|ZP_01385554.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031] gi|110341102|gb|EAT59570.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031] Length = 363 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 155/345 (44%), Positives = 223/345 (64%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 N GG+FD D +++ L T DP W + EA +++E +++ + Sbjct: 16 NSYGGIFDVDQRKEKVEDLEKITADPAFWNDQKEAHKILKELNEHKTWTEGYEKLAAKEK 75 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L LE+A E +D S E S + I+ E+ +F+++LSG+ D+ +A + +HAGAGG Sbjct: 76 VCLDELEIASELEDESFSDELSTAIAEIEQEIAAIEFKNMLSGKDDAGNALITIHAGAGG 135 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+G AYG+LK E GV Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIQGAYAYGYLKAENGV 195 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SPYDSN+RRHTSF+S++ YP +EIE+ + D + T+R+ G GGQ+VN + Sbjct: 196 HRLVRVSPYDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVE 255 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVRI H+PTG+VV CQ+ERSQ +N+ +A ML A+LY+ + ++ + E K +I Sbjct: 256 TAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQREEEDAKKREIEGKKKKIE 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL + +KD RTN E+ VLDGDLD+FM+ L+ Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEHYLS 359 >gi|262370876|ref|ZP_06064200.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046] gi|262314238|gb|EEY95281.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046] Length = 310 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 168/308 (54%), Positives = 221/308 (71%), Gaps = 1/308 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N ++ + + +L D +L+LA+E DD S+L + L + E+ +F Sbjct: 1 MAKEKGELENVLNVLDGLATQLEDAQAMLDLAVEADDESLLADVQAELTSAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+ KR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATLA 352 F++A+L Sbjct: 300 KFIEASLK 307 >gi|262380518|ref|ZP_06073672.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164] gi|262297964|gb|EEY85879.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164] Length = 310 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 168/308 (54%), Positives = 222/308 (72%), Gaps = 1/308 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ ++ + +L D +L+LA+E DD S+L + L + + +F Sbjct: 1 MAKEKGELENVINVLEGLSTQLEDAQAMLDLAVEADDESLLADVQAELSSAEEALAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+TH+PTG+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+ KR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATLA 352 F++A+L Sbjct: 300 KFIEASLK 307 >gi|297848140|ref|XP_002891951.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp. lyrata] gi|297337793|gb|EFH68210.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp. lyrata] Length = 470 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 159/351 (45%), Positives = 226/351 (64%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S+ + + W + RL L+ + P LW + I A + RE L + + Sbjct: 110 ISQSIQVIKRRLQWKKLLVRLKVLSAELNKPDLWNDPIHAGKISREHGSLTGKMKGVMTF 169 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L+LA EE+D + ET + ++ + K+ E+LLS E D Y+EV Sbjct: 170 ERELLEHIDMLKLAKEENDTELESETLKAMMDMRRVSKEKELEALLSAENDPCSCYIEVQ 229 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+M++ MY WA++RKF ++ GE AGIK AT+ + G +YG+ K Sbjct: 230 AGAGGTESNDWASMVMEMYKTWAQRRKFSVTVVDEAAGEIAGIKRATIKVNGEYSYGYAK 289 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P++ D S ++I++SD RI+ +R+ GAGGQ Sbjct: 290 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVQINDSDLRIERFRSGGAGGQ 349 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTTDSAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ + Sbjct: 350 HANTTDSAVRIIHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 409 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S TEI WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 410 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 460 >gi|148260683|ref|YP_001234810.1| peptide chain release factor 2 [Acidiphilium cryptum JF-5] gi|326403877|ref|YP_004283959.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301] gi|146402364|gb|ABQ30891.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium cryptum JF-5] gi|325050739|dbj|BAJ81077.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301] Length = 323 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 191/310 (61%), Positives = 240/310 (77%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 ++RER L + I+ D L L ELA E D S+L E L+RI E + ++ Sbjct: 1 MLRERNRLATQTEAVHTIERETEDALTLAELAEAEGDQSVLAEAEAALRRISEEAKRREI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 ESLL+GEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K LE +GE+AG Sbjct: 61 ESLLAGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMLEESEGEQAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ + G NAYGWLK E GVHRLVRISP+D+N+RR TSF+S+WVYPVVDDSIE+EI+ Sbjct: 121 IKSATIQVSGMNAYGWLKTEAGVHRLVRISPFDANARRQTSFASVWVYPVVDDSIEVEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A ML+++L Sbjct: 181 PADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQNDRSQHRNRATAMEMLKSRL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE+ELQKREE A ES+K +IGWG QIRSYVL PYQ+VKDLRTN E +P VL+GDLD Sbjct: 241 YEMELQKREEAAAASESAKRDIGWGHQIRSYVLAPYQLVKDLRTNFESGNPDAVLNGDLD 300 Query: 345 DFMKATLAIK 354 FM A+LA + Sbjct: 301 AFMAASLASR 310 >gi|237802887|ref|YP_002888081.1| peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT] gi|237804809|ref|YP_002888963.1| peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT] gi|231273109|emb|CAX10022.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT] gi|231274121|emb|CAX10915.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT] Length = 368 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 210/342 (61%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 D + L L + W +V+ A + L +S E+++++ Sbjct: 20 RRSLDPEGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQ 79 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LE D + +E + ++ + LLSGE D N +L ++AGAGGTES Sbjct: 80 FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 139 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW MLLRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K E GVHRL Sbjct: 140 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 199 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAV Sbjct: 200 VRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 259 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI +K EI WG Sbjct: 260 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 319 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 320 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361 >gi|308235215|ref|ZP_07665952.1| peptide chain release factor 2 [Gardnerella vaginalis ATCC 14018] gi|311114816|ref|YP_003986037.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019] gi|310946310|gb|ADP39014.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019] Length = 380 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 141/351 (40%), Positives = 214/351 (60%), Gaps = 1/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + + D ++ ++ L + +P LW + A+ + + + + ++ ++ Sbjct: 14 EAKYSLISKALDVNSLKTAIADLEKQASEPGLWDDSDHAQQVTSKLSAAQSQLKRLQAVE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 R+ D L+EL EE+D + E + L I E++ + ++LL GE D+ A + + + Sbjct: 74 QRIEDTKTLIELGQEEEDADSMSEAQEELGSIAHELDDMEVQTLLDGEYDARAAVVTIRS 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ D+A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+VRISP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ V Sbjct: 194 EGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQGV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L+ E + Sbjct: 254 NTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK-HAEEAAKKKELAGD 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363 >gi|260550208|ref|ZP_05824421.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624] gi|260406736|gb|EEX00216.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624] Length = 310 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 169/308 (54%), Positives = 224/308 (72%), Gaps = 1/308 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +E+ L+N I+ + + +L D +L+LA+E DD S+L + L + E+ +F Sbjct: 1 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLVDVQSELGTAEEELAKLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AG Sbjct: 61 RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ Sbjct: 121 IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 SD R DTYRASGAGGQH+N TDSAVR+THIP+G+VV CQ +RSQH N+ AW LRAKL Sbjct: 181 PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPSGIVVACQNQRSQHANRDHAWKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD Sbjct: 241 YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDS-RIKDLRTGVENSNTGAVLDGDLD 299 Query: 345 DFMKATLA 352 F++A+L Sbjct: 300 RFIEASLK 307 >gi|289432457|ref|YP_003462330.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT] gi|288946177|gb|ADC73874.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT] Length = 361 Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats. Identities = 147/351 (41%), Positives = 211/351 (60%), Gaps = 2/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ D ++ L T + +P WQ+ A+ M++ + Sbjct: 7 ELKGRIFSDMVRLDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRG 66 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D L L+ E D S+ E + + E++ + SG+ D+ +A L V Sbjct: 67 LERRINDLTELAVLSRE--DPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTV 124 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGG ESQDWA MLLRM+ RWA K+ F E L+ GEEAGIKSATL I+G AYG+L Sbjct: 125 HAGAGGVESQDWAGMLLRMFMRWAAKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFL 184 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRL+R+SP+D++ RHTSF+ + + P +DS++I+I D +ID +R+SG GGQ Sbjct: 185 KSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQ 244 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +V +AVR+THIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR E + Sbjct: 245 NVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKG 304 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + WG QIRSYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 305 ERISAEWGSQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLR 355 >gi|325925182|ref|ZP_08186595.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas perforans 91-118] gi|325544436|gb|EGD15806.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas perforans 91-118] Length = 329 Score = 342 bits (878), Expect = 5e-92, Method: Composition-based stats. Identities = 172/318 (54%), Positives = 224/318 (70%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ L RER L+ + I ++ L D LLELA E D +L Sbjct: 2 WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTALAVIADLDNY 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + VE +F+ + SG+ DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE + Sbjct: 62 QAHVEKLEFQRMFSGQMDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL +KDLRT IE++ Sbjct: 242 AMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD+F++A+L Sbjct: 301 QKVLDGDLDEFVEASLKA 318 >gi|322372865|ref|ZP_08047401.1| peptide chain release factor 2 [Streptococcus sp. C150] gi|321277907|gb|EFX54976.1| peptide chain release factor 2 [Streptococcus sp. C150] Length = 337 Score = 342 bits (878), Expect = 5e-92, Method: Composition-based stats. Identities = 150/336 (44%), Positives = 215/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ +E L +Q+ + + LE+ Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D S+ +E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA+MLL Sbjct: 59 EEDSSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|253988706|ref|YP_003040062.1| peptide chain release factor 2 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211637969|emb|CAR66597.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780156|emb|CAQ83317.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica] Length = 310 Score = 342 bits (878), Expect = 5e-92, Method: Composition-based stats. Identities = 172/309 (55%), Positives = 221/309 (71%), Gaps = 1/309 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ + I +++ L D LLELA+E DD E L++++ ++ +F Sbjct: 1 MGKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFHEAVAELEQLEGKLGQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DGE AG Sbjct: 61 RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ Sbjct: 121 LKSATIRIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 241 YELEMQKKNANRQEMEENKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQSVLDGDLD 299 Query: 345 DFMKATLAI 353 F++A+L Sbjct: 300 KFIEASLKA 308 >gi|227499885|ref|ZP_03929978.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC 35098] gi|227217994|gb|EEI83267.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC 35098] Length = 333 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 158/331 (47%), Positives = 223/331 (67%), Gaps = 2/331 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED--DCS 83 + K++ P W + +A +M + ++ K++++ + DN+ LL+L D + Sbjct: 1 MEKKSQSPDFWNDSDKASQIMADLSLKKEDLNEYKKLEEGIRDNVDLLDLVELSDNKEED 60 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + ++L+ + + + ++ LSGE D N+ Y+ ++AGAGG E+ DWA+ML RMY R Sbjct: 61 TVNAVEESLEALYKLADKMKLKTQLSGEYDKNNCYISINAGAGGLEATDWADMLFRMYKR 120 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 + + +K E ++++ E GIKSATL +KGP AYG+LKGE+GVHRLVRISP+DS SRRH Sbjct: 121 YFDNVGYKYELKDLNNEEAGGIKSATLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRH 180 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S+ V+P +DD++EI+I SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV Sbjct: 181 TSFASVDVFPELDDNLEIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATS 240 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q ERSQ +NK A N+L +KL +++ +++ E + ++I WG QIRSYV QPY MV Sbjct: 241 QAERSQIQNKQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIAWGSQIRSYVFQPYTMV 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KD RTN E + V+DGDL F+ A LA K Sbjct: 301 KDHRTNYEMGNVEAVMDGDLQGFIDAYLASK 331 >gi|114561768|ref|YP_749281.1| peptide chain release factor 2 [Shewanella frigidimarina NCIMB 400] gi|114333061|gb|ABI70443.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella frigidimarina NCIMB 400] Length = 320 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 161/317 (50%), Positives = 219/317 (69%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L + I ++ L D LLELA+EEDD + + L+ + Sbjct: 2 WNEPERAQALGKERAALVVVVKTIDDMDTGLEDIQGLLELAIEEDDEETFNDAAAELEEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + +F + SG++D+++ YL++ +G+GGTE+QDWANM+LRMY RW + + E + Sbjct: 62 DTRLADLEFRRMFSGKSDASNCYLDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYSPELM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ DG+ AGIK AT+ G A+GW++ E GVHRLVR SP+DS+ +RHTSF S++VYP + Sbjct: 122 EVTDGDVAGIKGATIKFTGEYAFGWMRTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD IEI+I+ SD RIDTYRASGAGGQHVN TDSA+RITH+PT VVQCQ +RSQHKN+ Sbjct: 182 DDDIEIDINPSDLRIDTYRASGAGGQHVNKTDSAIRITHLPTNTVVQCQNDRSQHKNRDS 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A+ L+AKLYELE+ K+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AFKQLKAKLYELEMHKQNADKQAAEDAKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 301 QTVLDGDLDKFIEASLK 317 >gi|222823300|ref|YP_002574873.1| peptide chain release factor 2 [Campylobacter lari RM2100] gi|254790909|sp|B9KEY7|RF2_CAMLR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|222538521|gb|ACM63622.1| peptide chain release factor 2 [Campylobacter lari RM2100] Length = 366 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 169/354 (47%), Positives = 231/354 (65%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL ++ + + + RL + P W +V +A ++ +E+ + N + + Sbjct: 12 KLKNKVGNIASIIKPEEIKARLKEIENLENSPSFWSDVKQAGIIGKEKTKISNLLKNYEN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D L +LA E+D +Q D+ ++ + + LLSGE D +A + + Sbjct: 72 AFNALNDASELFDLANSENDLDTIQALFDDAPNLEDLIVSLEISMLLSGENDGKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+L Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI + D RID YRASGAGGQ Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEDKDIRIDYYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+P+G+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 252 HVNKTESAVRITHMPSGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDEANSS-- 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+N + ++LDGD+ ++ L +K Sbjct: 310 EKSEIGWGHQIRSYVLFPYQQVKDTRSNEAFSQVDNILDGDIKKMIEGVLIAQK 363 >gi|283479628|emb|CAY75544.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM 12163] Length = 310 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 170/309 (55%), Positives = 221/309 (71%), Gaps = 1/309 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ + + ++ L D LLELA+E +D E + L + ++ +F Sbjct: 1 MGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGELEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG Sbjct: 61 RRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS+++YP VDD+I+IEI+ Sbjct: 121 TKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE E+QK+ E +K++IGWG QIRSYVL +KDLRT++E + VLDGDLD Sbjct: 241 YEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDDS-RIKDLRTSVETRNTQAVLDGDLD 299 Query: 345 DFMKATLAI 353 F++A+L Sbjct: 300 RFIEASLKA 308 >gi|238759279|ref|ZP_04620445.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236] gi|238702440|gb|EEP94991.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236] Length = 310 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 171/309 (55%), Positives = 218/309 (70%), Gaps = 1/309 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ +S I ++ + D LLELA+E DD E L + ++ +F Sbjct: 1 MGKERSALEEIVSTIDQLDQGMEDVSGLLELAIEADDEETFNEAVAELDTLDGKLGQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG Sbjct: 61 RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 121 LKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE E+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLD 299 Query: 345 DFMKATLAI 353 F++A+L Sbjct: 300 KFIEASLKA 308 >gi|194337758|ref|YP_002019552.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme BU-1] gi|194310235|gb|ACF44935.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme BU-1] Length = 363 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 149/345 (43%), Positives = 223/345 (64%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 N GG+FD D +++ L + DP W + A +++E + ++I + Sbjct: 16 NSYGGIFDVDERKEKIEDLEKISFDPAFWNDQKAANKVLKELNEHKSWTDAYEKIILKAR 75 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++A+E DD S +E + + I+ ++ +F+++LSG+ D+ +A + +HAGAGG Sbjct: 76 SCQDEFDIAIELDDESFGEELTALIASIEHDISAIEFKNMLSGKDDAGNAMITIHAGAGG 135 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK E GV Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIEGPYAYGYLKAENGV 195 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SP+DSN+RRHTSF+S++ YP +EI++ + D + T+R+ G GGQ+VN + Sbjct: 196 HRLVRVSPFDSNARRHTSFASVFTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVE 255 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVRI H+PTG+VV CQ+ERSQ +N+ +A ML A+LY+ + + + E K +I Sbjct: 256 TAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQRDEEDARKREIEGKKKKIE 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL + +KD RTN E+ VLDGDLD+FM+ L+ Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEKYLS 359 >gi|113953765|ref|YP_731847.1| peptide chain release factor 2 [Synechococcus sp. CC9311] gi|113881116|gb|ABI46074.1| peptide chain release factor 2, programmed frameshift [Synechococcus sp. CC9311] Length = 375 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 146/351 (41%), Positives = 208/351 (59%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +L D + L P W + A+ MR + + + + Sbjct: 13 ELTDRLGHAQDCLDVPALNAKQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLVD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D LEL E D +L E L +++ ++ + E LLSGE D A L + Sbjct: 73 WRGAIDDGQATLELHELEPDEDLLGEAQQGLNQLRQALDRWELERLLSGEYDKEGAVLSI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGT++QDWA MLLRMYTRWAE + E+ +GEEAGIKS T+ I+G AYG+L Sbjct: 133 NAGAGGTDAQDWAQMLLRMYTRWAEDQGMSVSVNELSEGEEAGIKSTTIEIEGRYAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G HRLVRISP+++N +R TSF+ + V P +D+ +E++I E D + T R+ GAGGQ Sbjct: 193 RNEKGTHRLVRISPFNANDKRQTSFAGVEVMPKLDEEVELDIPEKDLEVTTSRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R Sbjct: 253 NVNKVETAVRILHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E WG QIR+YV PYQMVKDLRT E T V+DGDL+ F++A L Sbjct: 313 DIVEAAWGNQIRNYVFHPYQMVKDLRTQEETTDVQGVMDGDLNPFIQALLR 363 >gi|225549349|ref|ZP_03770322.1| peptide chain release factor 2 [Borrelia burgdorferi 94a] gi|225370207|gb|EEG99647.1| peptide chain release factor 2 [Borrelia burgdorferi 94a] Length = 348 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 155/347 (44%), Positives = 222/347 (63%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 3 KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L E+A E D + L+ ++ + + S E D+N+A+L +H+GAGG Sbjct: 63 DLSDLCEIAENEKDTNGLE---IEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 238 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345 >gi|296272007|ref|YP_003654638.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299] gi|296096182|gb|ADG92132.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299] Length = 364 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 161/344 (46%), Positives = 224/344 (65%), Gaps = 2/344 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + + D RL + W +V A + E+ + + +S K+ + L Sbjct: 18 QNIKDILKPDVLKSRLKEIEELESSQDFWNDVETATKIGIEKNRILSKLSKFKKANESLS 77 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L E+ALEE D + + + + + +LS DS++A + +H GAGG Sbjct: 78 GTNELYEMALEEKDEDTFELLHGEAEELDNLIRSTEISVMLSNPDDSSNAIISIHPGAGG 137 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDWA+ML RMY RWAE+ FK E L+ DGEEAG+K + +IKG NAYG+LK E G+ Sbjct: 138 TESQDWASMLYRMYLRWAERMDFKIEVLDYQDGEEAGLKDVSFIIKGENAYGYLKAENGI 197 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DSN++RHTSF+S+ V P +DD+I+I + + D RIDTYR+SGAGGQHVN T+ Sbjct: 198 HRLVRISPFDSNAKRHTSFASVMVSPEIDDNIDIVVEDKDIRIDTYRSSGAGGQHVNKTE 257 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITHI T +VVQCQ +RSQHKNKA A ML+++LYE EL+K++ + + K+EIG Sbjct: 258 SAIRITHIATNIVVQCQNDRSQHKNKASAMKMLKSRLYEYELEKQQAVKD--GVEKSEIG 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV+QPYQ +KD R+NI ++ +LDGD+ ++ L Sbjct: 316 WGHQIRSYVMQPYQQIKDTRSNIGYSNVEAILDGDITKMIEDVL 359 >gi|312868547|ref|ZP_07728744.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3] gi|311095918|gb|EFQ54165.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3] Length = 332 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 158/325 (48%), Positives = 211/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ L+ + L ++D+L D LEL E D + +E + Sbjct: 1 MAQPDFWNDNERAQKLINDNNDLKAKRDTYVALRDQLADLETNLELLELEPDPELEKEFA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + ++ + LLS + DS +A LE+H GAGGTE+QDW MLLRMY RWAE+ Sbjct: 61 TSFAQTEEALQQYRLNQLLSEKYDSKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 E GE AGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LTVETANYEPGEVAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V Q ERSQ Sbjct: 181 DVMPELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD R+ Sbjct: 241 LLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 HETHNGQAVMDGDLDPFINAYLQWK 325 >gi|108562592|ref|YP_626908.1| peptide chain release factor 2 [Helicobacter pylori HPAG1] gi|122386784|sp|Q1CUY8|RF2_HELPH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|107836365|gb|ABF84234.1| peptide chain release factor RF-2 [Helicobacter pylori HPAG1] Length = 363 Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESVELFELAQNDNDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|55821157|ref|YP_139599.1| peptide chain release factor 2 [Streptococcus thermophilus LMG 18311] gi|55823068|ref|YP_141509.1| peptide chain release factor 2 [Streptococcus thermophilus CNRZ1066] gi|116627872|ref|YP_820491.1| peptide chain release factor 2 [Streptococcus thermophilus LMD-9] gi|55737142|gb|AAV60784.1| peptide chain release factor 2 [Streptococcus thermophilus LMG 18311] gi|55739053|gb|AAV62694.1| peptide chain release factor 2 [Streptococcus thermophilus CNRZ1066] gi|116101149|gb|ABJ66295.1| bacterial peptide chain release factor 2 (bRF-2) [Streptococcus thermophilus LMD-9] Length = 337 Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats. Identities = 150/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ +E L +++ + + LE+ Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D S+ +E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA MLL Sbjct: 59 EEDDSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|21242619|ref|NP_642201.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri str. 306] gi|21108083|gb|AAM36737.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri str. 306] Length = 329 Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats. Identities = 171/318 (53%), Positives = 223/318 (70%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ L RER L+ + I ++ L D LLELA E D +L Sbjct: 2 WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDNY 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + VE +F+ + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE + Sbjct: 62 QAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL +KDLRT IE++ Sbjct: 242 AMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVL-DQSRIKDLRTGIERSDT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD+F++A+L Sbjct: 301 QKVLDGDLDEFVEASLKA 318 >gi|228477420|ref|ZP_04062056.1| peptide chain release factor 2 [Streptococcus salivarius SK126] gi|228250855|gb|EEK10043.1| peptide chain release factor 2 [Streptococcus salivarius SK126] Length = 337 Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats. Identities = 151/336 (44%), Positives = 215/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ +E L +Q+ + + LE+ Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEML-- 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D S+ +E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA+MLL Sbjct: 59 EEDDSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|320095989|ref|ZP_08027602.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977060|gb|EFW08790.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178 str. F0338] Length = 372 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 143/355 (40%), Positives = 219/355 (61%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + + +++ LN K P LW + A+ + H + + + + Sbjct: 12 LRLTMDNVLAVVRPERLRAQIAELNEKAAAPDLWDDPARAQEVTSALSHRQSELDRVVRM 71 Query: 63 QDRLCDNLILLELALEEDDC--SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +R+ D ++E+A E+ D IL E + +L +K +V + +LL GE D +A + Sbjct: 72 GERIDDLEAMVEMAGEDPDEAEEILDEAAADLDTLKKDVSDLEIRTLLDGEYDERNAVIT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ D+A +LLRMY RWAE+ + T+ ++ EEAG+KSAT ++ P AYG Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYATKVMDTSYAEEAGLKSATFEVQAPYAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GG Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIEIPESELKVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L + E+ Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVL-RHEEEQAKKKEL 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 311 AGDVKASWGDQMRSYVLQPYQMVKDLRTEFESGNPQAVFDGDIDGFINAGIRWRK 365 >gi|290580262|ref|YP_003484654.1| putative peptide chain release factor [Streptococcus mutans NN2025] gi|254997161|dbj|BAH87762.1| putative peptide chain release factor [Streptococcus mutans NN2025] Length = 325 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 146/325 (44%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +Q+ + +L E+ E+D S+ E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEML--EEDDSLQGELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EDLVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK + L+ G+EAGIKS L +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVDVLDYQAGDEAGIKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIP+G+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG+LD F+ A L + Sbjct: 299 YEVSQVDRVMDGELDGFIDAFLKWR 323 >gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 375 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 227/351 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ ++ RL L K DP LW + +AK + ++R L + Sbjct: 14 EMIESFQTYWTAQNFQEDYDRLLSLIEKANDPKLWDSPDQAKNVTQKRNELQMKLDPWLG 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L+EL EE S L+ +D+ R+ E Q LSG+ D A++ + Sbjct: 74 LKKELLDFPDLIELTSEEMGESGLKSLNDDFDRMFESFENLQMLDALSGKDDGKAAFINI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTR+AE++ ++ E ++ GE AGIK+ATL I+G + +G+L Sbjct: 134 HPGAGGTESQDWADMLLRMYTRFAEQKGYRAELVDYQPGETAGIKNATLYIQGDHPFGYL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN RRHTSF+S++V P VDD I++ I E D R+D YR+SGAGGQ Sbjct: 194 KCESGVHRLVRISPFDSNKRRHTSFASVYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTGVVV CQ ERSQ KN+ A ML+A+LYE+E QK EE Sbjct: 254 HVNTTDSAVRITHIPTGVVVSCQMERSQIKNRDTAMKMLKARLYEMEKQKAEEENAKKAG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYV PY +VKD RT+ E + V+DGDL+DF+ A L Sbjct: 314 EKRDIAWGSQIRSYVFHPYNLVKDHRTDFETGNVHAVMDGDLEDFIIAYLK 364 >gi|294790676|ref|ZP_06755834.1| peptide chain release factor 2 [Scardovia inopinata F0304] gi|294458573|gb|EFG26926.1| peptide chain release factor 2 [Scardovia inopinata F0304] Length = 370 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 144/353 (40%), Positives = 210/353 (59%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + N +++ L + P LW + A+++ N + + Sbjct: 12 EARSKFETISSALGRQNLAEKIVSLEKEASAPGLWDDQENAQLVTSRLSQTQNEAKRLDD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D L EL EEDD E L ++ ++ + ++LL GE D+ A + + Sbjct: 72 LERRLDDIATLYELGSEEDDQDSKAEAEKELTAVRSDLSDLEIQTLLDGEYDNRAAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAE+ +K + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADWAQMLMRMYLRWAERHHYKVQIMDTSYAEEAGIKSATFEVDAPYAYGKL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+NSRR TSF+++ V P+V+ + I+I +SD R+DTY + G GGQ Sbjct: 192 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDIPDSDIRVDTYMSHGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A ++L+++L ++ + E + Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMSVLQSRLLVMKQ-EEEAAKKKELA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + P V DGD+D F+ A + + Sbjct: 311 GDVKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQKVFDGDIDAFIDAGIRWR 363 >gi|218779410|ref|YP_002430728.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans AK-01] gi|218760794|gb|ACL03260.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans AK-01] Length = 327 Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats. Identities = 148/322 (45%), Positives = 222/322 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + + +++ER + + + +++ + L + +LLEL +EE+D ++E Sbjct: 1 MAQDGFWDSPDKNTAILKERTSITSLVEGWEKLAEELSEAEVLLELGVEEEDGQTIEEAR 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L +I+ ++ +L GE D+ +A + ++AGAGGT++QDWA MLLRMY RW E++ Sbjct: 61 QHLVKIEKGIDKLSLSRMLDGEDDARNAIVAINAGAGGTDAQDWAEMLLRMYLRWVEQKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F ++ G+EAG+K T + G AYG+LK E+GVHRLVRISP++SN +R TSF+S+ Sbjct: 121 FSYSIIDYQPGDEAGVKGVTFTVTGDYAYGYLKTEEGVHRLVRISPFNSNGKRQTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 VYP +D I ++++E D RID +RASGAGGQHVN T SAVRI HIPTG+VVQCQQE+SQ Sbjct: 181 AVYPEIDQEIVVDVNEKDLRIDVFRASGAGGQHVNKTSSAVRILHIPTGIVVQCQQEKSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+N+ A +L+A+LY++E +++++ +K EIG+G QIRSYVL PYQMVKD R N Sbjct: 241 HRNRDLAMKVLKARLYQVEQEQQQKQMQDNYEAKEEIGFGNQIRSYVLHPYQMVKDHRIN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 ++ + + VLDGD+D F++A L Sbjct: 301 MDVGNVNAVLDGDIDPFIEAVL 322 >gi|54297691|ref|YP_124060.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris] gi|53751476|emb|CAH12894.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris] Length = 335 Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats. Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + E ++W N +A+ L RER L+ + + ++ + D L ELA EEDD Sbjct: 2 EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQ 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + + D L+ I+ +V +F + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R Sbjct: 62 TIIDIGDELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E F TE +E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRH Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA LRAKLYELE+QK+ E++K++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEATKSDIGWGSQIRSYVL-DQSRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E ++ VLDG LD F++A+L Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330 >gi|269792424|ref|YP_003317328.1| peptide chain release factor 2 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100059|gb|ACZ19046.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermanaerovibrio acidaminovorans DSM 6589] Length = 374 Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats. Identities = 163/354 (46%), Positives = 218/354 (61%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L ++ L D + +++ L + W+ ++ + RE L Sbjct: 12 NLRSRMCELRDSLDLEGLDRKIGELMERVSSDGFWE-REDSTEVARELSQLQQRRESFSA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L EL +D + +E D ++ +E Q +LL E D +DA + + Sbjct: 71 LEREMEDLETLAELLQAGEDEDLSREFYDRAAEMERRLERTQVLTLLDEEYDRSDAIVGI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGG +SQDWA ML RMY RWAE+ FK L+ +EAGIKS T + G AYG+L Sbjct: 131 HAGAGGLDSQDWAEMLYRMYVRWAERNGFKVRVLDELPDQEAGIKSVTFQVSGEYAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE+GVHRLVRISP+D+ RRHTSF+S+ V PV+ D +EIEI D ++DT+RASGAGGQ Sbjct: 191 KGERGVHRLVRISPFDAAKRRHTSFASVEVMPVLPDDVEIEIRPEDIKMDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN TDSAVRITHIPTG+VV CQ ERSQH N+A A ML++KL+E +L++R+E + Sbjct: 251 YVNMTDSAVRITHIPTGIVVSCQVERSQHMNRATALQMLKSKLFERQLRERQEQLEAIQG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K I WG QIRSY LQP+Q+VKD R+ E + VLDGDLDD M A L K Sbjct: 311 EKRAISWGSQIRSYTLQPFQLVKDHRSGCEIGNVQAVLDGDLDDLMMAYLKFYK 364 >gi|296169215|ref|ZP_06850868.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896113|gb|EFG75780.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 368 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 161/352 (45%), Positives = 218/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + + H + I+E+ Sbjct: 12 LDSTLTTVERVLDVDGLRSRIEKLEHEASDPQLWDDQSNAQRVTSQLSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA EED L E L+ ++ ++E + +LLSGE D +A + + Sbjct: 72 RQRLDDLPVLYELAAEEDAADALAEADAELKALRADIEATEVRTLLSGEYDEREALVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYLRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V PVVD + I+I E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVDTTDHIDIPEGDVRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E + + + + Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRSEERAELDALKGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 312 GGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 362 >gi|329120961|ref|ZP_08249592.1| peptide chain release factor RF2 [Dialister micraerophilus DSM 19965] gi|327471123|gb|EGF16577.1| peptide chain release factor RF2 [Dialister micraerophilus DSM 19965] Length = 328 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ + ++ +A ++ +R LL++A+EEDD + + Sbjct: 1 MSDPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIEEDDQGMEGDLK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + + K+ E LL+ E D+N+A + HAGAGGTE+QDW ML+RMY +WAE Sbjct: 61 QEIEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E L + G+EAGIKSA +IKG AYG LK E+GVHRLVRISP+D+ RRHTSFS++ Sbjct: 121 YGIEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+PTG+V CQ ERSQ Sbjct: 181 DVMPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVAACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK Q +LRAKL+ELE++K E++ + + I WG QIRSYV QPY +VKD RT Sbjct: 241 TQNKEQCLRILRAKLFELEMKKHEQLKRNIQGEQQAIEWGSQIRSYVFQPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DGDL+ F++ L K Sbjct: 301 VETGNVQAVMDGDLNPFIEGFLKSK 325 >gi|57239093|ref|YP_180229.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Welgevonden] gi|57161172|emb|CAH58086.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Welgevonden] Length = 367 Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats. Identities = 177/355 (49%), Positives = 244/355 (68%), Gaps = 2/355 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L++ L + G D DN L LNTK D LW + + A ++ ER + + Sbjct: 12 VNLNKALQLIRGYLDIDNLTSLLVDLNTKCADTSLWNDNLTAHHVLSERARISKIVGLFT 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+++ LL + + S+L + S L+ +K +V+ K+ E L S EAD ND ++E Sbjct: 72 ELEEEYQYYNELLSVISNDS-DSLLDDLSKGLEALKEKVKKKEVECLFSDEADQNDCFIE 130 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGGTES DW+NMLLRMY RWAE FKT+ + DGEE G+KSA + + G NAYG Sbjct: 131 IQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGVKSAIIKVIGYNAYG 190 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 W K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I + D RIDTYRASGAG Sbjct: 191 WSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHDKDLRIDTYRASGAG 250 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T+SAVRITHIP+G+VVQCQ RSQH+N +A+N+LR++LY+L+LQ++E+ Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLYQLKLQEKEKKMAQE 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S + +IGWG QIRSYV+ PYQMVKD+RT E + + VLDGDLD F+ ATL K Sbjct: 311 HSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDAFIIATLTKK 365 >gi|159902739|ref|YP_001550083.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9211] gi|159887915|gb|ABX08129.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9211] Length = 356 Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats. Identities = 146/342 (42%), Positives = 205/342 (59%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD L P W + +AK MR + + + + + D Sbjct: 2 LRTVFDVPALNALRKDLEQIASQPEFWNDQQKAKKEMRRLDEVKAQLKKLVDWDAAIEDA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + LEL E D +L E L +K +++ + E LLSG+ D L ++AGAGGT+ Sbjct: 62 QVSLELYELEPDDEMLAEAIKGLDNLKSDLDLWELERLLSGQYDKEGVVLSINAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMYTRWA+ K E+ +GEEAGIKSATL I G AYG+L+ E+G HR Sbjct: 122 AQDWAQMLLRMYTRWADDHGMKVTVDELSEGEEAGIKSATLEIDGRYAYGYLQNEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ + + P +++ +E++I E D I T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANGKRQTSFAGVEIMPKLEEEVELDIPEKDLEITTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+P+G+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 242 VRIVHLPSGLAVRCTQERSQLQNKEKAMALLKAKLMIIAQEQRASQIADIRGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRT E T V++GDLD F++A L Sbjct: 302 NQIRNYVFHPYQMVKDLRTGKESTDVEGVMNGDLDPFIQALL 343 >gi|193215043|ref|YP_001996242.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC 35110] gi|193088520|gb|ACF13795.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC 35110] Length = 366 Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats. Identities = 158/350 (45%), Positives = 224/350 (64%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S +L+ L G D D + ++ L KT W N A+ +++E ++ Sbjct: 12 ISERLSLLRGFLDIDARLNAIAELEKKTAAEGFWSNQESAQKVLKEISGHREWTEDFLDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L LE+A E +D S L E N+ ++ V +F ++LSG D +A L +H Sbjct: 72 EKTLQGEEESLEIAEELEDESYLAEAEKNIDKLDRAVHALEFRNMLSGADDKRNALLTIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA+ML RMY RWAE+R FK + +G+ AGIK+ATL I+G AYG+LK Sbjct: 132 AGAGGTEAQDWADMLYRMYMRWAERRGFKVFTDDYQEGDGAGIKTATLEIQGDYAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SP+D+N+RRHTSF+S++ YP D +EIEI + D +DT+R+ G GGQ+ Sbjct: 192 AENGVHRLVRVSPFDANARRHTSFASVYAYPEAPDDVEIEIRKEDLEMDTFRSGGKGGQN 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVRI H+P+G+VV CQQERSQ +N+ +A MLR++LY+L+ ++ E E Sbjct: 252 VNKVETAVRIKHVPSGIVVACQQERSQFQNRERAMKMLRSRLYQLKREEEEAAKLALEGK 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYVL + +KD RTN E + VLDGD+D F++ LA Sbjct: 312 KKKIEWGSQIRSYVLDD-RRIKDHRTNHESFNVEAVLDGDIDQFIERYLA 360 >gi|172041186|ref|YP_001800900.1| peptide chain release factor 2 [Corynebacterium urealyticum DSM 7109] gi|171852490|emb|CAQ05466.1| peptide chain release factor RF-2 [Corynebacterium urealyticum DSM 7109] Length = 377 Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats. Identities = 155/358 (43%), Positives = 213/358 (59%), Gaps = 7/358 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R L + DP LW + A+ + E + + I+E+ Sbjct: 12 LEGTLTTIERVLDLDELDWRARELEDQAADPSLWDDPDHAQQVTSELSRVQAKLKKIREL 71 Query: 63 QDRLCDNLILLELALEEDDC------SILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116 + RL D +L +A EE + + ++ +E + ++LSGE D + Sbjct: 72 RQRLEDLPVLYNMAEEEAAEDPAASEDAVAMAEEERSALRAAIESLEITTMLSGEYDQRE 131 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A + + +GAGG ++ DWA MLLRMYTRWAE+ K + +I EEAGIKSAT +I G Sbjct: 132 ALVNIRSGAGGVDAADWAEMLLRMYTRWAEQHGHKVDIYDISYAEEAGIKSATFVIHGDY 191 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 YG L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IE+ ++D R+D YR+S Sbjct: 192 MYGTLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDADVRVDVYRSS 251 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + Sbjct: 252 GPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEEKAEM 311 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + WG Q+RSYVL PYQMVKDLRT E P VLDGDLD ++A + + Sbjct: 312 D-ALGAGGNASWGNQMRSYVLHPYQMVKDLRTEYEVGDPQKVLDGDLDGLIEAGIRWR 368 >gi|308182345|ref|YP_003926472.1| peptide chain release factor 2 [Helicobacter pylori PeCan4] gi|308064530|gb|ADO06422.1| peptide chain release factor 2 [Helicobacter pylori PeCan4] Length = 363 Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESIELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAK--NEE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|300932665|ref|ZP_07147921.1| peptide chain release factor 2 [Corynebacterium resistens DSM 45100] Length = 378 Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats. Identities = 151/360 (41%), Positives = 214/360 (59%), Gaps = 8/360 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + + D + L + DP LW + A+ + E + + +K Sbjct: 11 EMDSTLTTIEKVLDLEALADSARELEDRAADPSLWDDPDHAQKVTSELSRVQGKLRKVKS 70 Query: 62 IQDRLCDNLILLELALEE--DDCSILQETSD----NLQRIKLEVEYKQFESLLSGEADSN 115 ++ RL D ++ ++A E +D E + ++ E+E + ++LSGE D Sbjct: 71 LRQRLEDLPVMYDMAEEAAAEDPDTADEAMEMADEERAELRKEIESLEVTTMLSGEYDQR 130 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A + + +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G Sbjct: 131 EAVVNIRSGAGGVDAADWAEMLMRMYTRWAEKSGHKVDIYDISYAEEAGIKSATFVVHGE 190 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSR-RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 YG L EQG HRLVR+SP+ S R TSF+ + V PVV+ + I+I +++ R+D YR Sbjct: 191 YMYGTLSVEQGAHRLVRLSPFGSGGDKRQTSFAEVEVLPVVEQTDHIDIPDAEVRVDVYR 250 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + + E Sbjct: 251 SSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKR-QEER 309 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E PS VLDGDLD F++A + + Sbjct: 310 AELDALGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGIRWR 369 >gi|163795148|ref|ZP_02189116.1| Protein chain release factor B [alpha proteobacterium BAL199] gi|159179546|gb|EDP64075.1| Protein chain release factor B [alpha proteobacterium BAL199] Length = 322 Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats. Identities = 195/309 (63%), Positives = 246/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+ + + ++ L D L+L+EL E D + + + L+ I+++ E Q E Sbjct: 1 MQERTRLEKQLGEVNQLNQGLEDALMLIELGETEGDDATVADAEKELEAIRVKAESMQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND YLEVHAGAGGTE+QDWA MLLRMYTRW+E+R FK E LE GEEAG+ Sbjct: 61 SLLSGEADANDCYLEVHAGAGGTEAQDWAEMLLRMYTRWSERRGFKVEWLEESQGEEAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISPYDS +RRHTSFSS WVYPV+DDSI+I + + Sbjct: 121 KSATVKISGHNAYGWLKIESGVHRLVRISPYDSQARRHTSFSSAWVYPVIDDSIDIVVED 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D ++DTYRASGAGGQHVN TDSA+RITH+P+G+VVQCQ +RSQH+N+A A ML+A+LY Sbjct: 181 KDLKVDTYRASGAGGQHVNRTDSAIRITHLPSGIVVQCQADRSQHRNRATAMEMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL++REE A+ E++K++IGWG QIRSYVLQPYQMVKDLRTN E ++P+ VLDGD+D Sbjct: 241 EAELKRREEEASATEATKSDIGWGHQIRSYVLQPYQMVKDLRTNEESSNPAAVLDGDIDA 300 Query: 346 FMKATLAIK 354 F++A LA + Sbjct: 301 FLEAALAAR 309 >gi|319946614|ref|ZP_08020848.1| peptide chain release factor RF2 [Streptococcus australis ATCC 700641] gi|319746662|gb|EFV98921.1| peptide chain release factor RF2 [Streptococcus australis ATCC 700641] Length = 325 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 150/325 (46%), Positives = 207/325 (63%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L ++ D ++ ILLE E D S+ +E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLEFLSE--DESVHEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 EKLIELDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD+D F+ A L + Sbjct: 299 YEVAQVDKVMDGDIDGFIDAYLKWR 323 >gi|90417703|ref|ZP_01225615.1| peptide chain release factor 2 [Aurantimonas manganoxydans SI85-9A1] gi|90337375|gb|EAS51026.1| peptide chain release factor 2 [Aurantimonas manganoxydans SI85-9A1] Length = 321 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 218/309 (70%), Positives = 251/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD AI + + L DN+ L+ + EE D I++E ++ IK E + +Q E Sbjct: 1 MRERQFLDTAIGAVNRLNQSLQDNIELIAMGEEEKDAEIVKEAEAAIREIKSEADKRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEADSND Y+EVH+GAGGTESQDWA ML RMY RWAE+ KFK E LE H GEEAGI Sbjct: 61 TLLSGEADSNDTYVEVHSGAGGTESQDWAAMLQRMYMRWAERAKFKVEVLEEHSGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGW+K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDDSI+I+++E Sbjct: 121 KSATLLIKGHNAYGWMKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDSIDIDVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RIDTYRASGAGGQHVNTTDSAVRITH+ TG+VVQCQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHLETGIVVQCQAERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL++RE AN +SKT+IGWG QIRSYVLQPYQMVKDLRT IE TSP DVLDG LD Sbjct: 241 EAELERRENAANAEAASKTDIGWGHQIRSYVLQPYQMVKDLRTGIESTSPQDVLDGGLDP 300 Query: 346 FMKATLAIK 354 FM+ LA + Sbjct: 301 FMEGALAHR 309 >gi|154148037|ref|YP_001406088.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381] gi|238686699|sp|A7I0P7|RF2_CAMHC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|153804046|gb|ABS51053.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381] Length = 364 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 161/350 (46%), Positives = 226/350 (64%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +++ + + + RL+ + +DP LW + +A + RE+ + N ++ K+ Sbjct: 12 ELKNKISNVEAIIKPKILMTRLAEIEKTEQDPALWVDAKKAAQIGREKTKISNILAKFKK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 Q+ L D ELA+ E+D + E ++ + + +LSGE D +A + + Sbjct: 72 AQNELNDAKEFYELAVSENDGETINELFRESAKLSENIANLELSMMLSGENDDKNAIINI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTE +DWA ML RMY R+ E+ +K E L+ +G+EAGIK ++KG NAYG+L Sbjct: 132 HPGAGGTEGEDWAGMLYRMYVRFCERVGYKIEILDFQEGDEAGIKDVNFIVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DS RRHTSF+S+ V P +DD I+I I E D RID YR+SGAGGQ Sbjct: 192 KVESGIHRLVRISPFDSAGRRHTSFASVVVSPELDDDIQINIDEKDLRIDYYRSSGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPT +VVQCQ +R QHKNKA A +L+++LYELE K++E +N Sbjct: 252 HVNKTESAVRITHIPTNIVVQCQNDRDQHKNKASAMKVLKSRLYELEKLKKQEESNKTPK 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 S +I WG QIR+YVL PYQ VKDLR+NI + +LDGD+ ++ L Sbjct: 312 S--DIAWGYQIRNYVLFPYQQVKDLRSNIAYSQAEAILDGDIKKILEDVL 359 >gi|325953656|ref|YP_004237316.1| peptide chain release factor 2 [Weeksella virosa DSM 16922] gi|323436274|gb|ADX66738.1| peptide chain release factor 2 [Weeksella virosa DSM 16922] Length = 366 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 146/351 (41%), Positives = 226/351 (64%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +++ L + + +++ KT P W + +A+M M+E + + I + + Sbjct: 10 IQKRIQALYTYLEIEQKRIQVTNDEEKTASPDFWDDPKKAEMFMKELRSIKKWIEDYESV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D +L+E E + +E ++ + +E +F+++LS E D+ A L++ Sbjct: 70 EQAANDLEVLIEFNKEGEVSD--EEVQEHYSKTIKLLENIEFKNMLSDEGDNLGAILQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML+RMY WAE +K L G+ AG+K+ TL I G A+GWLK Sbjct: 128 AGAGGTESCDWASMLMRMYLMWAESHGYKVRELNFQAGDVAGVKTVTLEIDGEFAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF S +V P+VD++IEI+I+ +D + T R+ GAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFVSAYVSPMVDETIEIDINPADIEMQTSRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+VV CQ ERSQ N+ +A ML+++LY++EL K+ N ES+ Sbjct: 248 VNKVETKVQLTHKPTGIVVICQIERSQLANRERAMEMLKSELYKIELDKKMAARNEIESN 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIR+YV+ PY++VKD+RT E + V++GD+D F+K+ L + Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTGTETGNVDAVMNGDIDQFLKSYLML 358 >gi|238752991|ref|ZP_04614450.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380] gi|238708779|gb|EEQ01038.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380] Length = 310 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 172/309 (55%), Positives = 218/309 (70%), Gaps = 1/309 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 + +ER L+ ++ I ++ + D LLELA+E DD E L + ++ +F Sbjct: 1 MGKERSALEEIVTTIDQLDQGMEDVSGLLELAIEADDEETFNEAIAELDILDGKLGQLEF 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG Sbjct: 61 RRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 121 IKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKL Sbjct: 181 PADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE E+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 241 YEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDS-RIKDLRTGVETRNTQAVLDGDLD 299 Query: 345 DFMKATLAI 353 F++A+L Sbjct: 300 KFIEASLKA 308 >gi|84494447|ref|ZP_00993566.1| peptide chain release factor 2 [Janibacter sp. HTCC2649] gi|84383940|gb|EAP99820.1| peptide chain release factor 2 [Janibacter sp. HTCC2649] Length = 370 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 140/352 (39%), Positives = 207/352 (58%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D ++ L + P LW + +A+ + + + Sbjct: 12 LRTTMTSVRDVTDLTALEATIADLEEQVAAPDLWDDQEKAQAVTSLLSRAKAEYDRVTGM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D L+E+ EE+D L E L+ +K V + +LLSGE D A + + Sbjct: 72 DTKVDDLEALVEMGQEENDAETLLEAEKELKIVKKAVGELEVRTLLSGEWDERSAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T+ ++ EEAGIKSAT + P A+G L Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEVNVPYAFGNLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF ++ V P+++ + IEI E+D +ID +R+SG GGQ Sbjct: 192 VEGGTHRLVRISPFDNQGRRQTSFVAVEVIPLIEGTDSIEIPENDLKIDVFRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG VV Q E+SQ +N+A A +++++L L+ + E + Sbjct: 252 VNTTDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKRAE-EAAVKKEMAG 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E +P+ V DGD+D F++A + + Sbjct: 311 DVKASWGDQMRSYVLNPYQMVKDLRTEFETGNPTAVFDGDIDGFIEAGIRWQ 362 >gi|317008842|gb|ADU79422.1| peptide chain release factor 2 [Helicobacter pylori India7] Length = 363 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ + +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDINKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNALDESVELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITH