PSIBLAST alignment of GI: 254780753 and protein with PDB id: 2b3t
>gi|88192214|pdb|2B3T|B Chain B, Molecular Basis For Bacterial Class 1 Release Factor Methylation By Prmc Length = 360
Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats.
Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%)
Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
+ +R + D + + L RE L + + Q D +
Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68
Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
+ + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A
Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128
Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188
Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
+S R HTS ++ V P + D+ +++ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248
Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306
Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
R+Y P V D R N+ +V++G LD ++ + +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349