PSIBLAST alignment of GI: 254780753 and protein with PDB id: 3f1e
gi|218766794|pdb|3F1E|X Chain X, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. Length = 378
>gi|218766850|pdb|3F1G|X Chain X, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. Length = 378
Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 152/351 (43%), Positives = 205/351 (58%), Gaps = 5/351 (1%)
Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
GG+FD RL L + EDP LW + A+ + +E L + + ++
Sbjct: 20 RNAWKASGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLE 79
Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
L L L+E E+ + L+ +++ ++LL+ +A L +
Sbjct: 80 SDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQP 135
Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L
Sbjct: 136 GAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSP 195
Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ V
Sbjct: 196 EAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGV 255
Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
NTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE
Sbjct: 256 NTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEV 315
Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
I WG QIRSYVL VKD RT + + P +VLDGDL D + A L K
Sbjct: 316 RPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 365