RPSBLAST alignment of GI: 254780753 and protein with PDBid: 2ihr
>2ihr_1 Peptide chain release factor 2; mixed alpha-beta, translation; 2.50A {Thermus thermophilus} PDB: 2b9m_Y* 3f1e_X 3f1g_X 2jl5_Y 2jl7_Y 2wh1_Y 2wh3_Y Length = 365
Score = 265 bits (678), Expect = 1e-71
Identities = 155/353 (43%), Positives = 213/353 (60%), Gaps = 5/353 (1%)
Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
+L+++L LGG+FD RL L + EDP LW + A+ + +E L + +
Sbjct: 5 RLAQRLEGLGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64
Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
++ L L L+E E+ ++ E + +++ ++LL+ +A L +
Sbjct: 65 LESDLQGLLELMEELPAEEREALKPELEEAAKKLD----ELYHQTLLNFPHAEKNAILTI 120
Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L
Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180
Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ
Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240
Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
VNTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE
Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300
Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
I WG QIRSYVL VKD RT + + P +VLDGDL D + A L K
Sbjct: 301 EVRPIEWGSQIRSYVL-DKNYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 352