RPSBLAST alignment of GI: 254780753 and protein with PDBid: 2jy9

>2jy9_A Putative tRNA hydrolase domain; GFT protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2} Length = 148

 Score = 96.1 bits (239), Expect = 1e-20
 Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 34/145 (23%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSA------VRITHIPT-------------- 257
           S  + I++++  I   RA GAGGQHVN T SA      +R + +P               
Sbjct: 5   SRTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLI 64

Query: 258 ----GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN-IGESSKTEIGWGRQI 312
                ++++ Q+ RSQ  N+  A   L A + EL  +++   A     +SK      +  
Sbjct: 65  SDDGVIIIKAQEFRSQELNREAAIARLVAVIKELTAEQKSRRATRPTRASKERRLSSKAQ 124

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSD 337
           +S        VK LR  + +  P D
Sbjct: 125 KS-------SVKALRGKVRR--PLD 140