HHsearch alignment for GI: 254780754 and conserved domain: COG0061
>COG0061 nadF NAD kinase [Coenzyme metabolism].
Probab=100.00 E-value=0 Score=407.87 Aligned_cols=220 Identities=32% Similarity=0.528 Sum_probs=190.2
Q ss_pred CHHHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEE---CCCCC
Q ss_conf 845577999987954899999997412872994153433201044587899986642012432034434542---12444
Q gi|254780754|r 33 TSEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTFHPLKMTVFD---YDNSI 109 (264)
Q Consensus 33 ~~~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~G~lGFL~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~ 109 (264)
T Consensus 52 ~~~~~d~ivvlGGDGtlL~~~~~~~~~~~pilgin~G~lGFLt-~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~v~~~~- 129 (281)
T COG0061 52 DEEKADLIVVLGGDGTLLRAARLLARLDIPVLGINLGHLGFLT-DFEPDELEKALDALLEGEYRIEERLLLEVSVNRGD- 129 (281)
T ss_pred CCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCC-
T ss_conf 5677649999899689999999745569978999889830036-76878999999998647624776568999996387-
Q ss_pred CCEEEEEEEEEEEEECCCCCCEEEEEEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHCCCEEEEECCCEEEEECCCC
Q ss_conf 42015775347997268764236788898766787653121035079822665044675229817740886058630354
Q gi|254780754|r 110 CAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSP 189 (264)
Q Consensus 110 ~~~~~~AlNEi~i~r~~~~~~~~~~~~~~v~id~~~~~~~~~~DGvivSTptGSTAY~lSaGGpIv~p~~~~~~itpI~p 189 (264)
T Consensus 130 -~~~~~aLNEv~I~~~~~~~----~~~~~v~id~~~-~~~~r~DGliVsTPTGSTAY~lSAGGPIv~P~l~ai~ltpi~p 203 (281)
T COG0061 130 -IRRALALNEVVIHRGSPAK----MIEFEVYIDDEF-FESFRGDGLIVSTPTGSTAYNLSAGGPILHPGLDAIQLTPICP 203 (281)
T ss_pred -CEEEEEEEEEEEECCCCCC----EEEEEEEECCEE-EEEEECCEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEECCC
T ss_conf -4068888879996488764----489999999999-9999868999918986777863079960699988699984577
Q ss_pred CCHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCEE---CCCCCEEEEEECCCCCEEEEECCCC-CHHHHHHHHHCC
Q ss_conf 3301111002788414899974878875899988988---1487789999879951899964888-899988887517
Q gi|254780754|r 190 FKPRRWHGAILPNDVMIEIQVLEHKQRPVIATADRLA---IEPVSRINVTQSSDITMRILSDSHR-SWSDRILTAQFS 263 (264)
Q Consensus 190 ~~l~~~rplVl~~~~~I~i~i~~~~~~~~~~~~D~~~---~~~~~~i~I~~s~~~~~~li~~~~~-~f~~ril~~kF~ 263 (264)
T Consensus 204 ~~l~-~Rpiv~p~~~~v~i~~~~~~~~~~~~~~Dg~~~~~~~~~~~i~i~~s~-~~~~~~~~~~~~~~~~~l-~~~~~ 278 (281)
T COG0061 204 HSLS-FRPLVLPSSSTVRIEVLLTPKRDAVVVVDGQELLLINPGDRIEIRRSP-YKARFIRLRSYDDFFERL-RSKLI 278 (281)
T ss_pred CCCC-CCCEEECCCCEEEEEECCCCCCCEEEEECCCEEEECCCCCEEEEEECC-CEEEEECCCCCHHHHHHH-HHHHC
T ss_conf 7877-887798997469999845776560999759765715998489999857-547880467722599999-99764