HHSEARCH alignment of GI: 254780754 and SCOP domain: d2bona1

Alignment
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=97.32  E-value=0.0054  Score=36.12  Aligned_cols=203  Identities=14%  Similarity=0.130  Sum_probs=86.0

Q ss_pred             HHCCEEEEECCCHHHHHHHHHHHHC---CCEEEEE-CCCCCCCCCCCCC-HHHHHHHHHHCCCCCCCEEEEEEEECCCCC
Q ss_conf             5577999987954899999997412---8729941-5343320104458-789998664201243203443454212444
Q gi|254780754|r   35 EEADVIVVLGGDGFMLQSFHQSKEY---DKPIYGM-NCGSVGFLMNEYC-IENLVERLSVAVECTFHPLKMTVFDYDNSI  109 (264)
Q Consensus        35 ~~~Dlii~iGGDGT~L~a~~~~~~~---~~PilGI-n~G~lGFL~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  109 (264)
                      +.+|.|++.|||||+-.++.-....   ..|.+|| =+|+-.-++.... +.++.+++..+..+...+..  +...++..
T Consensus        52 ~~~d~Ivv~GGDGTv~ev~~gl~~~~~~~~p~lgilP~GTgN~~Ar~lg~~~~~~~a~~~i~~g~~~~id--~~~v~~~~  129 (295)
T d2bona1          52 FGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAID--MAQVNKQT  129 (295)
T ss_dssp             HTCSEEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEEEEEE--EEEETTSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHCCCCEEEEE--EEEEECCE
T ss_conf             6997899977982798999878750678896599997786653087749984246666420356259854--00341000


Q ss_pred             C-C-EE---EEE--EEEEEEEECC------------CCCCEEEEEEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHC
Q ss_conf             4-2-01---577--5347997268------------76423678889876678765312103507982266504467522
Q gi|254780754|r  110 C-A-EN---ILA--INEVSIIRKP------------GQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSA  170 (264)
Q Consensus       110 ~-~-~~---~~A--lNEi~i~r~~------------~~~~~~~~~~~~v~id~~~~~~~~~~DGvivSTptGSTAY~lSa  170 (264)
                      . . .-   +.|  .+++.=.+..            ......+..++++..|++. +   .++...++-..+.+    -.
T Consensus       130 ~f~~~~~~G~~a~v~~~~~~~~~~~~G~~~y~~~~~~~l~~~~~~~~~i~~d~~~-~---~~~~~~~~v~n~~~----~g  201 (295)
T d2bona1         130 CFINMATGGFGTRITTETPEKLKAALGSVSYIIHGLMRMDTLQPDRCEIRGENFH-W---QGDALVIGIGNGRQ----AG  201 (295)
T ss_dssp             EESSEEEEEEEEEC----------CCHHHHHHHHHTSCEEEEECEEEEEEETTEE-E---EEEESEEEEESSSC----BT
T ss_pred             EEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC-C---CCCEEEEEECCCCC----CC
T ss_conf             3536631011177787778876434430245566665530367604789732422-2---24405787315641----05


Q ss_pred             CCEEEEEC-------CCEEEEECCCCCCH--HHHH-----H-CCCCCCCEEEEEECCCCCCEEEEEECCEECCCCCEEEE
Q ss_conf             98177408-------86058630354330--1111-----0-02788414899974878875899988988148778999
Q gi|254780754|r  171 LGPILPLE-------SRHLLLTPVSPFKP--RRWH-----G-AILPNDVMIEIQVLEHKQRPVIATADRLAIEPVSRINV  235 (264)
Q Consensus       171 GGpIv~p~-------~~~~~itpI~p~~l--~~~r-----p-lVl~~~~~I~i~i~~~~~~~~~~~~D~~~~~~~~~i~I  235 (264)
                      ||-.+.|.       ++++.+.+..-...  ..++     | +.--...+++|+.    .++..+..||..+. ...++|
T Consensus       202 ~g~~i~P~a~~~dg~l~v~~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~v~I~~----~~~~~~~iDGE~~~-~~p~~i  276 (295)
T d2bona1         202 GGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQA----PHDITFNLDGEPLS-GQNFHI  276 (295)
T ss_dssp             TTBCSCTTCCTTSSCEEEEEECCSSCCHHHHHHHHTTCCCTTEEEEEESEEEEEE----EEEEEEEETTEEEE-EEEEEE
T ss_pred             CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEE----CCCCEEEECCCCCC-CCCEEE
T ss_conf             8965587777777846999974267999999986466789988999968999994----89897993689898-986599


Q ss_pred             EECCCCCEEEEECCCCCH
Q ss_conf             987995189996488889
Q gi|254780754|r  236 TQSSDITMRILSDSHRSW  253 (264)
Q Consensus       236 ~~s~~~~~~li~~~~~~f  253 (264)
                      +..++ .++++.+.+..+
T Consensus       277 ~v~P~-aL~vlvP~~~p~  293 (295)
T d2bona1         277 EILPA-ALRCRLPPDCPL  293 (295)
T ss_dssp             EEEEE-EEEEEECTTCTT
T ss_pred             EEECC-EEEEECCCCCCC
T ss_conf             99979-899988899866


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Lipid kinase YegS
species: Escherichia coli [TaxId: 562]