Query gi|254780754|ref|YP_003065167.1| inorganic polyphosphate/ATP-NAD kinase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 264
No_of_seqs 129 out of 1944
Neff 6.3
Searched_HMMs 13730
Date Wed Jun 1 08:11:04 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780754.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u0ta_ e.52.1.1 (A:) Inorgani 100.0 0 0 416.7 23.2 248 6-263 1-294 (302)
2 d1z0sa1 e.52.1.1 (A:1-249) Ino 100.0 0 0 381.4 21.1 236 6-262 1-245 (249)
3 d2qv7a1 e.52.1.2 (A:1-312) Dia 97.9 0.00051 3.7E-08 42.6 14.6 224 6-251 3-297 (312)
4 d2bona1 e.52.1.2 (A:5-299) Lip 97.3 0.0054 4E-07 36.1 15.4 203 35-253 52-293 (295)
5 d4pfka_ c.89.1.1 (A:) ATP-depe 94.6 0.039 2.8E-06 30.7 5.9 52 35-90 92-153 (319)
6 d1pfka_ c.89.1.1 (A:) ATP-depe 94.3 0.041 3E-06 30.6 5.3 52 35-90 93-154 (320)
7 d2f48a1 c.89.1.1 (A:4-553) Pyr 93.8 0.081 5.9E-06 28.7 6.1 40 36-75 163-219 (550)
8 d2a9va1 c.23.16.1 (A:1-196) GM 92.6 0.078 5.7E-06 28.8 4.5 66 5-70 1-83 (196)
9 d1v4va_ c.87.1.3 (A:) UDP-N-ac 90.3 0.52 3.8E-05 23.6 9.8 47 36-82 88-134 (373)
10 d2nv0a1 c.23.16.1 (A:1-195) Hy 89.6 0.26 1.9E-05 25.5 4.7 66 5-70 1-82 (195)
11 d1o6ca_ c.87.1.3 (A:) UDP-N-ac 88.6 0.49 3.6E-05 23.8 5.6 39 35-73 87-125 (377)
12 d1s1ma1 c.23.16.1 (A:287-544) 88.0 0.34 2.5E-05 24.8 4.5 39 31-69 52-95 (258)
13 d1k9vf_ c.23.16.1 (F:) GAT sub 87.2 0.5 3.7E-05 23.7 5.0 65 6-70 1-87 (200)
14 d1q7ra_ c.23.16.1 (A:) Hypothe 87.1 0.87 6.3E-05 22.2 6.2 64 4-70 5-87 (202)
15 d1vcoa1 c.23.16.1 (A:298-547) 86.5 0.15 1.1E-05 27.0 2.0 35 35-69 57-96 (250)
16 d1f6da_ c.87.1.3 (A:) UDP-N-ac 86.3 0.95 6.9E-05 22.0 6.6 39 35-73 85-123 (376)
17 d1jvna2 c.23.16.1 (A:-3-229) G 83.0 0.52 3.8E-05 23.6 3.4 68 3-70 2-89 (232)
18 d1oi4a1 c.23.16.2 (A:23-192) H 80.4 1.3 9.8E-05 21.0 4.8 39 33-71 61-107 (170)
19 d1g2ia_ c.23.16.2 (A:) Intrace 78.0 1.8 0.00013 20.3 4.8 39 33-71 58-104 (166)
20 d1vlja_ e.22.1.2 (A:) NADH-dep 76.6 2.1 0.00016 19.7 6.3 63 5-68 34-142 (398)
21 d1wl8a1 c.23.16.1 (A:1-188) GM 73.9 2.3 0.00016 19.6 4.4 65 6-70 1-82 (188)
22 d1rrma_ e.22.1.2 (A:) Lactalde 73.4 2.3 0.00016 19.6 4.3 21 36-57 87-107 (385)
23 d1o1ya_ c.23.16.1 (A:) Hypothe 72.9 1.3 9.6E-05 21.1 3.0 39 32-70 44-94 (230)
24 d1kq3a_ e.22.1.2 (A:) Glycerol 72.9 2.2 0.00016 19.7 4.1 33 35-68 82-115 (364)
25 d2fexa1 c.23.16.2 (A:1-188) Hy 72.3 1.6 0.00012 20.6 3.3 38 33-70 60-104 (188)
26 d1ydhb_ c.129.1.1 (B:) Hypothe 71.6 1.6 0.00012 20.5 3.2 61 4-69 1-67 (181)
27 d1rrva_ c.87.1.5 (A:) TDP-vanc 70.5 2 0.00015 19.9 3.5 22 152-173 303-324 (401)
28 d1o2da_ e.22.1.2 (A:) Alcohol 68.1 2.7 0.00019 19.1 3.7 22 35-57 85-106 (359)
29 d1ujna_ e.22.1.1 (A:) Dehydroq 66.2 2.7 0.0002 19.1 3.5 36 32-68 80-118 (347)
30 d2acva1 c.87.1.10 (A:3-463) Tr 62.1 2.5 0.00018 19.3 2.7 28 36-66 112-139 (461)
31 d1ka9h_ c.23.16.1 (H:) GAT sub 60.6 4.7 0.00034 17.6 4.9 66 6-71 1-84 (195)
32 d1gpma2 c.23.16.1 (A:3-207) GM 60.4 1.2 8.5E-05 21.4 0.7 68 3-70 3-87 (205)
33 d2pjua1 c.92.3.1 (A:11-196) Pr 60.1 4.7 0.00035 17.6 5.6 66 7-93 28-93 (186)
34 d1a9xb2 c.23.16.1 (B:1653-1880 59.4 3.2 0.00023 18.6 2.8 63 6-70 40-120 (228)
35 d1qdlb_ c.23.16.1 (B:) Anthran 58.6 3 0.00022 18.8 2.6 65 5-70 1-87 (195)
36 d1iira_ c.87.1.5 (A:) UDP-gluc 58.4 5 0.00036 17.4 3.6 30 36-65 93-122 (401)
37 d1f0ka_ c.87.1.2 (A:) Peptidog 56.3 5.5 0.0004 17.1 3.6 32 35-67 89-120 (351)
38 d1qo0d_ c.23.1.3 (D:) Positive 56.1 5.5 0.0004 17.1 8.5 86 6-92 12-123 (189)
39 d2c1xa1 c.87.1.10 (A:7-456) UD 55.6 4 0.00029 18.0 2.8 31 36-69 106-136 (450)
40 d1sg6a_ e.22.1.1 (A:) Dehydroq 55.2 5.7 0.00042 17.0 4.7 34 34-68 100-136 (389)
41 d2pq6a1 c.87.1.10 (A:8-480) (I 55.0 4.2 0.0003 17.9 2.8 29 35-66 110-138 (473)
42 d1su1a_ d.159.1.7 (A:) Phospho 54.9 5 0.00037 17.4 3.2 37 5-46 1-37 (184)
43 d1p2fa2 c.23.1.1 (A:1-120) Res 52.4 6.3 0.00046 16.8 7.0 86 5-92 2-116 (120)
44 d1w25a1 c.23.1.1 (A:2-140) Res 52.4 6.3 0.00046 16.8 7.4 88 6-93 2-121 (139)
45 d1t35a_ c.129.1.1 (A:) Hypothe 51.4 5.9 0.00043 17.0 3.1 60 5-69 1-66 (179)
46 d1fyea_ c.23.16.4 (A:) Asparty 51.0 6.7 0.00049 16.6 5.7 37 34-70 77-123 (229)
47 d2ab0a1 c.23.16.2 (A:2-196) Pr 50.9 6.7 0.00049 16.6 3.9 37 34-70 63-108 (195)
48 d2a9pa1 c.23.1.1 (A:2-118) DNA 48.8 7.2 0.00053 16.4 6.9 83 6-90 1-114 (117)
49 d1eiwa_ c.23.3.1 (A:) Hypothet 47.0 7.7 0.00056 16.2 5.8 58 11-68 9-75 (111)
50 d1krwa_ c.23.1.1 (A:) NTRC rec 46.1 8 0.00058 16.1 5.6 83 7-91 5-119 (123)
51 d2r25b1 c.23.1.1 (B:1087-1214) 44.2 8.5 0.00062 16.0 8.9 84 7-91 3-124 (128)
52 d1pkla3 c.49.1.1 (A:358-498) P 44.1 6.9 0.00051 16.5 2.5 31 36-67 35-65 (141)
53 d1p80a1 c.23.16.3 (A:598-753) 42.6 9 0.00065 15.8 5.1 66 4-69 2-104 (156)
54 d1s3la_ d.159.1.7 (A:) Putativ 42.0 9.2 0.00067 15.7 5.7 54 6-67 1-57 (165)
55 d1ys7a2 c.23.1.1 (A:7-127) Tra 40.0 9.8 0.00072 15.5 6.5 83 7-91 3-117 (121)
56 d1gqna_ c.1.10.1 (A:) Type I 3 39.9 6.8 0.0005 16.6 1.9 42 48-91 60-105 (252)
57 d2c42a2 c.36.1.12 (A:786-1232) 39.7 10 0.00073 15.5 4.4 12 39-50 171-182 (447)
58 d1dz3a_ c.23.1.1 (A:) Sporulat 38.6 10 0.00075 15.4 5.4 21 6-27 2-22 (123)
59 d1sy7a1 c.23.16.3 (A:553-736) 37.9 11 0.00077 15.3 5.1 39 33-71 61-108 (184)
60 d1pn3a_ c.87.1.5 (A:) TDP-epi- 37.0 11 0.0008 15.3 3.4 34 35-68 91-124 (391)
61 d1i7qb_ c.23.16.1 (B:) Anthran 35.9 8.7 0.00064 15.9 2.0 35 36-70 47-86 (192)
62 d1ozha3 c.36.1.9 (A:367-558) C 35.4 8.1 0.00059 16.1 1.8 13 39-51 74-86 (192)
63 d2q4oa1 c.129.1.1 (A:8-190) Hy 34.1 12 0.00089 15.0 3.8 63 3-70 4-72 (183)
64 d1vhqa_ c.23.16.2 (A:) Putativ 33.1 13 0.00092 14.9 5.0 40 32-71 81-139 (217)
65 d1p5fa_ c.23.16.2 (A:) DJ-1 {H 33.1 13 0.00092 14.9 4.2 36 36-71 64-108 (186)
66 d2f62a1 c.23.14.1 (A:9-160) Nu 31.9 13 0.00097 14.7 6.5 34 35-69 58-99 (152)
67 d1k68a_ c.23.1.1 (A:) Response 31.9 13 0.00097 14.7 4.5 57 36-92 55-130 (140)
68 d1y4wa1 b.29.1.19 (A:373-536) 31.6 13 0.00095 14.8 2.3 15 197-211 97-111 (164)
69 d1thga_ c.69.1.17 (A:) Type-B 30.2 14 0.001 14.6 3.3 39 37-75 123-173 (544)
70 d1z2wa1 d.159.1.7 (A:1-182) Va 28.5 14 0.0011 14.5 2.1 60 6-70 1-62 (182)
71 d2pl1a1 c.23.1.1 (A:1-119) Pho 28.5 15 0.0011 14.4 7.2 84 6-91 1-116 (119)
72 d1s2da_ c.23.14.1 (A:) Purine 28.4 15 0.0011 14.4 4.6 37 35-72 80-121 (167)
73 d1qvwa_ c.23.16.2 (A:) Hypothe 28.0 15 0.0011 14.3 5.5 46 29-74 90-144 (236)
74 d1k66a_ c.23.1.1 (A:) Response 27.8 12 0.0009 14.9 1.6 92 2-94 3-139 (149)
75 d1f8ya_ c.23.14.1 (A:) Nucleos 27.6 16 0.0011 14.3 4.0 34 35-69 76-114 (156)
76 d1u9ca_ c.23.16.2 (A:) GK2698 27.1 16 0.0012 14.2 4.7 42 33-74 83-133 (221)
77 d1dbwa_ c.23.1.1 (A:) Transcri 26.4 17 0.0012 14.1 8.9 86 6-93 4-121 (123)
78 d1uf3a_ d.159.1.6 (A:) Hypothe 25.6 17 0.0012 14.0 8.3 63 1-70 1-72 (228)
79 d1jq5a_ e.22.1.2 (A:) Glycerol 25.4 17 0.0013 14.0 3.3 32 36-68 85-117 (366)
80 d1w25a2 c.23.1.1 (A:141-293) R 25.0 17 0.0013 14.0 5.9 86 6-92 14-130 (153)
81 d1ny5a1 c.23.1.1 (A:1-137) Tra 25.0 17 0.0013 14.0 7.6 86 6-92 1-117 (137)
82 d1mb3a_ c.23.1.1 (A:) Cell div 24.7 18 0.0013 13.9 8.5 86 6-92 2-120 (123)
83 d1i3ca_ c.23.1.1 (A:) Response 24.1 18 0.0013 13.9 5.1 88 6-94 4-133 (144)
84 d2gqfa1 c.3.1.8 (A:1-194,A:343 23.7 19 0.0014 13.8 4.2 38 137-178 146-193 (253)
85 d1m2ka_ c.31.1.5 (A:) AF1676, 23.5 19 0.0014 13.8 3.4 13 36-48 11-23 (249)
86 d1zesa1 c.23.1.1 (A:3-123) Pho 23.2 19 0.0014 13.8 7.9 85 6-91 1-118 (121)
87 d1kgsa2 c.23.1.1 (A:2-123) Pho 22.3 20 0.0014 13.6 6.5 84 6-91 2-117 (122)
88 d2djia3 c.36.1.9 (A:364-592) P 22.2 20 0.0014 13.6 2.2 10 20-29 7-16 (229)
89 d1t9ba3 c.36.1.9 (A:461-687) A 21.8 20 0.0014 13.6 1.7 11 40-50 84-94 (227)
90 d1llfa_ c.69.1.17 (A:) Type-B 21.6 20 0.0015 13.6 2.3 39 37-75 115-165 (534)
91 d2abwa1 c.23.16.1 (A:2-219) Py 21.6 20 0.0015 13.6 3.2 65 6-70 3-89 (218)
92 d2ji7a3 c.36.1.9 (A:370-552) O 21.5 20 0.0015 13.5 1.9 38 35-73 21-61 (183)
93 d2ez9a3 c.36.1.9 (A:366-593) P 21.0 21 0.0015 13.5 2.0 11 20-30 10-20 (228)
94 d2ji7a1 c.31.1.3 (A:195-369) O 20.8 16 0.0012 14.2 1.1 16 58-74 45-60 (175)
95 d1kf6a2 c.3.1.4 (A:0-225,A:358 20.2 22 0.0016 13.4 4.6 45 141-189 177-237 (311)
No 1
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00 E-value=0 Score=416.69 Aligned_cols=248 Identities=25% Similarity=0.396 Sum_probs=206.1
Q ss_pred EEEEEEEC-CCHHHHHHHHHHHHHCCCC---------------------------------------CHHHCCEEEEECC
Q ss_conf 05999955-9989999999999870788---------------------------------------8455779999879
Q gi|254780754|r 6 QKIHFKAS-NAKKAQEAYDKFVKIYGNS---------------------------------------TSEEADVIVVLGG 45 (264)
Q Consensus 6 ~ki~i~~~-~~~~a~~~~~~l~~~~~~~---------------------------------------~~~~~Dlii~iGG 45 (264)
+|+.++.+ ..+++.+.++++.+++.+. ..+++|++|++||
T Consensus 1 r~v~lv~~~~k~~a~~~a~~i~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~lGG 80 (302)
T d1u0ta_ 1 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLGG 80 (302)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEEEEEC
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECC
T ss_conf 98999970989899999999999999789989998420001464445711343227642113553233346558999758
Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEE---EECCCCCCCEEEEEEEEEEE
Q ss_conf 548999999974128729941534332010445878999866420124320344345---42124444201577534799
Q gi|254780754|r 46 DGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTFHPLKMTV---FDYDNSICAENILAINEVSI 122 (264)
Q Consensus 46 DGT~L~a~~~~~~~~~PilGIn~G~lGFL~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~AlNEi~i 122 (264)
|||||+|+|.+.+.++||||||+|+||||+ +++++++.+.+.+...+.+..+++.. ...+++......+||||++|
T Consensus 81 DGT~L~a~~~~~~~~~PilGin~G~lGFL~-~~~~~~~~~~l~~~~~g~~~~~~r~~l~~~~~~~~~~~~~~~alNdvvi 159 (302)
T d1u0ta_ 81 DGTFLRAAELARNASIPVLGVNLGRIGFLA-EAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEVSL 159 (302)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSCCSSC-SEEGGGHHHHHHHHHHTCCEEEEECCEEEEEEETTEEEEEEEESSEEEE
T ss_pred CHHHHHHHHHHHCCCCEEEEECCCCCCEEC-CCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEEHHHHHHHHC
T ss_conf 739999999740039828983788630541-4545678999999874476201100122576169804520333201102
Q ss_pred EECCCCCCEEEEEEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHCCCCC
Q ss_conf 72687642367888987667876531210350798226650446752298177408860586303543301111002788
Q gi|254780754|r 123 IRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPFKPRRWHGAILPN 202 (264)
Q Consensus 123 ~r~~~~~~~~~~~~~~v~id~~~~~~~~~~DGvivSTptGSTAY~lSaGGpIv~p~~~~~~itpI~p~~l~~~rplVl~~ 202 (264)
.|+... +++.+++++||++ +++|+|||+||||||||||||+||||||++|++++|++||||||+++. ||+|+|+
T Consensus 160 ~~~~~~----~~~~~~v~i~~~~-~~~~~~DGlivSTPtGSTAYslSaGGPIv~p~~~~i~vtpi~p~sl~~-rplVl~~ 233 (302)
T d1u0ta_ 160 EKGPRL----GVLGVVVEIDGRP-VSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFG-RPMVTSP 233 (302)
T ss_dssp ECSSSS----SCEEEEEESSSSE-EEEEEESEEEEECTGGGGTHHHHTTCCEECTTCCCEEEEEESCSSSCC-CCEEECT
T ss_pred CCCCCC----CEEEEEEEECCEE-EEEEECCEEEEEHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECC
T ss_conf 357654----4246899961325-788612418984142057401205686444334222101134423567-4388669
Q ss_pred CCEEEEEECCCCCCEEEEEECCE---ECCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHCC
Q ss_conf 41489997487887589998898---81487789999879951899964888899988887517
Q gi|254780754|r 203 DVMIEIQVLEHKQRPVIATADRL---AIEPVSRINVTQSSDITMRILSDSHRSWSDRILTAQFS 263 (264)
Q Consensus 203 ~~~I~i~i~~~~~~~~~~~~D~~---~~~~~~~i~I~~s~~~~~~li~~~~~~f~~ril~~kF~ 263 (264)
+++|++++.... +++.++.||+ ++.++++|.|++|+ .++++++..+++||++ +++||.
T Consensus 234 ~~~i~i~~~~~~-~~~~v~~DG~~~~~l~~~d~I~I~~s~-~~~~lv~~~~~~f~~~-l~~Kl~ 294 (302)
T d1u0ta_ 234 EATIAIEIEADG-HDALVFCDGRREMLIPAGSRLEVTRCV-TSVKWARLDSAPFTDR-LVRKFR 294 (302)
T ss_dssp TCCEEEEECTTS-CCEEEEETTTEEEEECTTCEEEEEECS-SCEEEEECSCCCHHHH-HHHHHT
T ss_pred CCEEEEEEECCC-CCEEEEEECCCCEEECCCCEEEEEECC-CEEEEEEECCCCHHHH-HHHHCC
T ss_conf 848999981489-878999989955870899799999889-8899998189998999-999759
No 2
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=0 Score=381.41 Aligned_cols=236 Identities=25% Similarity=0.431 Sum_probs=190.1
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCC--------CCCHHHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
Q ss_conf 0599995599899999999998707--------88845577999987954899999997412872994153433201044
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYG--------NSTSEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNE 77 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~--------~~~~~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~G~lGFL~~~ 77 (264)
||++++++.....+++.+.+.+... .+..+++|+++++|||||||+|+|.+. ..+||+|||+|+||||+ +
T Consensus 1 mr~~iv~k~d~~~k~i~e~l~~~~~~~~~~~~~~~~~~~~D~vi~iGGDGT~L~a~~~~~-~~~PilGIn~G~lGFL~-~ 78 (249)
T d1z0sa1 1 MRAAVVYKTDGHVKRIEEALKRLEVEVELFNQPSEELENFDFIVSVGGDGTILRILQKLK-RCPPIFGINTGRVGLLT-H 78 (249)
T ss_dssp CEEEEEESSSTTHHHHHHHHHHTTCEEEEESSCCGGGGGSSEEEEEECHHHHHHHHTTCS-SCCCEEEEECSSSCTTC-C
T ss_pred CEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHC-CCCCEEEECCCCCCCCC-C
T ss_conf 957999778646999999998507707871574122457999999878199999999836-79948997752467743-2
Q ss_pred CCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEEEEECCEEEEEEEECCEEEE
Q ss_conf 58789998664201243203443454212444420157753479972687642367888987667876531210350798
Q gi|254780754|r 78 YCIENLVERLSVAVECTFHPLKMTVFDYDNSICAENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVV 157 (264)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~AlNEi~i~r~~~~~~~~~~~~~~v~id~~~~~~~~~~DGviv 157 (264)
++++++...+++... .+..+++..+... .....+||||++|.|.... +++++++++||+. +++++|||+||
T Consensus 79 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~---~~~~~~AlNev~i~~~~~~----~~~~~~i~i~~~~-~~~~~gDGlii 149 (249)
T d1z0sa1 79 ASPENFEVELKKAVE-KFEVERFPRVSCS---AMPDVLALNEIAVLSRKPA----KMIDVALRVDGVE-VDRIRCDGFIV 149 (249)
T ss_dssp BBTTBCHHHHHHHHH-HCCEEEECCEEET---TEEEEEESSEEEEEESSTT----CCEEEEEEETTEE-EEEEEESEEEE
T ss_pred CCHHHHHHHHHHHHH-HHHHHHEEHHHEE---EEECCCCCCCCEEEECCCC----HHHHHHHHCCCCC-CEEEEECEEEE
T ss_conf 487789999987665-4242210011100---0101124565246633751----3456655306643-24896023998
Q ss_pred ECCCCHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCEE-CCCCCEEEEE
Q ss_conf 226650446752298177408860586303543301111002788414899974878875899988988-1487789999
Q gi|254780754|r 158 STPIGSTAYNFSALGPILPLESRHLLLTPVSPFKPRRWHGAILPNDVMIEIQVLEHKQRPVIATADRLA-IEPVSRINVT 236 (264)
Q Consensus 158 STptGSTAY~lSaGGpIv~p~~~~~~itpI~p~~l~~~rplVl~~~~~I~i~i~~~~~~~~~~~~D~~~-~~~~~~i~I~ 236 (264)
||||||||||+||||||++|++++|++||||||++. +||+|+|++++|+++.. .+.++.||++ +..+++|.|+
T Consensus 150 sTptGSTAY~lSaGGpIv~p~~~~~~ltpI~p~~l~-~rplVl~~~~~I~i~~~-----~~~v~~DG~~~~~~~~~i~i~ 223 (249)
T d1z0sa1 150 ATQIGSTGYAFSAGGPVVEPYLECFILIPIAPFRFG-WKPYVVSMERKIEVIAE-----KAIVVADGQKSVDFDGEITIE 223 (249)
T ss_dssp EESGGGGTHHHHTTCCEECTTSCCEEEEEESCCSSB-CCCEEECTTSCEEEEEE-----EEEEEETTTEEEEEEEEEEEE
T ss_pred ECCCCCHHHHHHCCCCEEECCCCCEEEEEECCCCCC-CCCEEECCCCEEEEEEC-----CEEEEECCCEEECCCCEEEEE
T ss_conf 242367788974678266547771687641343567-99889899988999916-----618997796111599989999
Q ss_pred ECCCCCEEEEECCCCCHHHHHHHHHC
Q ss_conf 87995189996488889998888751
Q gi|254780754|r 237 QSSDITMRILSDSHRSWSDRILTAQF 262 (264)
Q Consensus 237 ~s~~~~~~li~~~~~~f~~ril~~kF 262 (264)
+++ .++.+++ ..+|+++ +.+|.
T Consensus 224 ~s~-~~~~~~~--~~~~~~~-l~~KL 245 (249)
T d1z0sa1 224 KSE-FPAVFFK--NEKRFRN-LFGKV 245 (249)
T ss_dssp ECS-CCEEEEC--CTTHHHH-HHHHH
T ss_pred ECC-CCEEEEC--CCHHHHH-HHHHH
T ss_conf 899-8469924--6658999-99875
No 3
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}
Probab=97.90 E-value=0.00051 Score=42.59 Aligned_cols=224 Identities=14% Similarity=0.097 Sum_probs=99.8
Q ss_pred EEEEEEECCCH---HHHHHHHHHHHHCC-----------CC-----------CHHHCCEEEEECCCHHHHHHHHHHHHCC
Q ss_conf 05999955998---99999999998707-----------88-----------8455779999879548999999974128
Q gi|254780754|r 6 QKIHFKASNAK---KAQEAYDKFVKIYG-----------NS-----------TSEEADVIVVLGGDGFMLQSFHQSKEYD 60 (264)
Q Consensus 6 ~ki~i~~~~~~---~a~~~~~~l~~~~~-----------~~-----------~~~~~Dlii~iGGDGT~L~a~~~~~~~~ 60 (264)
||+.++.|+.- ++.+...++.+.+. +. ..+.+|+||+.|||||+-.++..+...+
T Consensus 3 kr~~vi~NP~SG~~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~d~ivv~GGDGTv~~v~~~l~~~~ 82 (312)
T d2qv7a1 3 KRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKP 82 (312)
T ss_dssp EEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEEECHHHHHHHHHHHTTCS
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC
T ss_conf 16999987688997579999999999997799289998289227999999887769988999867847999999997535
Q ss_pred --CEEEEECCCCCCCCCCCCC-HHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEE--------EEEE------E
Q ss_conf --7299415343320104458-789998664201243203443454212444420157753--------4799------7
Q gi|254780754|r 61 --KPIYGMNCGSVGFLMNEYC-IENLVERLSVAVECTFHPLKMTVFDYDNSICAENILAIN--------EVSI------I 123 (264)
Q Consensus 61 --~PilGIn~G~lGFL~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~AlN--------Ei~i------~ 123 (264)
+|+.=|-.|+-.-++-.+. +.++.++++....+...+.. +...++. +.+| +++- .
T Consensus 83 ~~~~l~iiP~GTgN~~ar~l~~~~~~~~al~~~~~~~~~~id--~~~v~~~------~f~~~~~~G~~a~~~~~~~~~~~ 154 (312)
T d2qv7a1 83 NRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVD--IGKMNNR------YFINLAAGGQLTQVSYETPSKLK 154 (312)
T ss_dssp SCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCEEEEE--EEEETTE------EESSEEEEECBCC----------
T ss_pred CCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEC--CCCCCCC------CEEEEEEEEHHHHHHHHHHHHHH
T ss_conf 566368753688875044224661499999755139818966--4346764------15556112022377899877632
Q ss_pred EC----------CCCCCEEEEEEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHCCCEEEEECCC----EEEEE---C
Q ss_conf 26----------8764236788898766787653121035079822665044675229817740886----05863---0
Q gi|254780754|r 124 RK----------PGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESR----HLLLT---P 186 (264)
Q Consensus 124 r~----------~~~~~~~~~~~~~v~id~~~~~~~~~~DGvivSTptGSTAY~lSaGGpIv~p~~~----~~~it---p 186 (264)
+. -......+...+.+.+|++. + .++.+.++-..+. +-.||.-+.|... .+.++ +
T Consensus 155 ~~~~~~~y~~~~~~~l~~~~~~~~~i~~dg~~-~---~~~~~~~~v~n~~----~~ggg~~i~p~a~~~DG~l~v~~~~~ 226 (312)
T d2qv7a1 155 SIVGPFAYYIKGFEMLPQMKAVDLRIEYDGNV-F---QGEALLFFLGLTN----SMAGFEKLVPDAKLDDGYFTLIIVEK 226 (312)
T ss_dssp ---CGGGSCCCTTTTGGGBCCEEEEEEETTEE-E---EEEEEEEEEESSC----CCSSCSCSSTTCCSSSSCEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC-E---ECCEEEEEEECCC----CCCCCCCCCCCCCCCCCCCEEEEECC
T ss_conf 03310588999999864048647885047763-1---3012553343153----04789744875555668615999738
Q ss_pred CCCCCHHH-----HHHCCCCC-------CCEEEEEECCCCCCEEEEEECCEECCCCCEEEEEECCCCCEEEEECCCC
Q ss_conf 35433011-----11002788-------4148999748788758999889881487789999879951899964888
Q gi|254780754|r 187 VSPFKPRR-----WHGAILPN-------DVMIEIQVLEHKQRPVIATADRLAIEPVSRINVTQSSDITMRILSDSHR 251 (264)
Q Consensus 187 I~p~~l~~-----~rplVl~~-------~~~I~i~i~~~~~~~~~~~~D~~~~~~~~~i~I~~s~~~~~~li~~~~~ 251 (264)
.+...+.. ++.-.+.. .++++|+. ..+..+..||..+... .++|+..+ ..++++.+++-
T Consensus 227 ~~~~~l~~~~~~~~~G~~~~~~~v~~~~~~~i~I~~----~~~~~~~iDGE~~~~~-p~~i~v~p-~al~vlvP~~~ 297 (312)
T d2qv7a1 227 SNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISS----FTDLQLNVDGEYGGKL-PANFLNLE-RHIDVFAPNDI 297 (312)
T ss_dssp CCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEEC----SSCCEEEETTEEEEES-CEEEEEEE-EEEEEECCTTS
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEEE----CCCCEEEECCCCCCCC-CEEEEEEC-CEEEEECCCCC
T ss_conf 999999999999866996789988999918899996----9999799747888897-65999999-98999888987
No 4
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=97.32 E-value=0.0054 Score=36.12 Aligned_cols=203 Identities=14% Similarity=0.130 Sum_probs=86.0
Q ss_pred HHCCEEEEECCCHHHHHHHHHHHHC---CCEEEEE-CCCCCCCCCCCCC-HHHHHHHHHHCCCCCCCEEEEEEEECCCCC
Q ss_conf 5577999987954899999997412---8729941-5343320104458-789998664201243203443454212444
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSKEY---DKPIYGM-NCGSVGFLMNEYC-IENLVERLSVAVECTFHPLKMTVFDYDNSI 109 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~~~---~~PilGI-n~G~lGFL~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 109 (264)
+.+|.|++.|||||+-.++.-.... ..|.+|| =+|+-.-++.... +.++.+++..+..+...+.. +...++..
T Consensus 52 ~~~d~Ivv~GGDGTv~ev~~gl~~~~~~~~p~lgilP~GTgN~~Ar~lg~~~~~~~a~~~i~~g~~~~id--~~~v~~~~ 129 (295)
T d2bona1 52 FGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAID--MAQVNKQT 129 (295)
T ss_dssp HTCSEEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEEEEEE--EEEETTSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHCCCCEEEEE--EEEEECCE
T ss_conf 6997899977982798999878750678896599997786653087749984246666420356259854--00341000
Q ss_pred C-C-EE---EEE--EEEEEEEECC------------CCCCEEEEEEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHC
Q ss_conf 4-2-01---577--5347997268------------76423678889876678765312103507982266504467522
Q gi|254780754|r 110 C-A-EN---ILA--INEVSIIRKP------------GQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSA 170 (264)
Q Consensus 110 ~-~-~~---~~A--lNEi~i~r~~------------~~~~~~~~~~~~v~id~~~~~~~~~~DGvivSTptGSTAY~lSa 170 (264)
. . .- +.| .+++.=.+.. ......+..++++..|++. + .++...++-..+.+ -.
T Consensus 130 ~f~~~~~~G~~a~v~~~~~~~~~~~~G~~~y~~~~~~~l~~~~~~~~~i~~d~~~-~---~~~~~~~~v~n~~~----~g 201 (295)
T d2bona1 130 CFINMATGGFGTRITTETPEKLKAALGSVSYIIHGLMRMDTLQPDRCEIRGENFH-W---QGDALVIGIGNGRQ----AG 201 (295)
T ss_dssp EESSEEEEEEEEEC----------CCHHHHHHHHHTSCEEEEECEEEEEEETTEE-E---EEEESEEEEESSSC----BT
T ss_pred EEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC-C---CCCEEEEEECCCCC----CC
T ss_conf 3536631011177787778876434430245566665530367604789732422-2---24405787315641----05
Q ss_pred CCEEEEEC-------CCEEEEECCCCCCH--HHHH-----H-CCCCCCCEEEEEECCCCCCEEEEEECCEECCCCCEEEE
Q ss_conf 98177408-------86058630354330--1111-----0-02788414899974878875899988988148778999
Q gi|254780754|r 171 LGPILPLE-------SRHLLLTPVSPFKP--RRWH-----G-AILPNDVMIEIQVLEHKQRPVIATADRLAIEPVSRINV 235 (264)
Q Consensus 171 GGpIv~p~-------~~~~~itpI~p~~l--~~~r-----p-lVl~~~~~I~i~i~~~~~~~~~~~~D~~~~~~~~~i~I 235 (264)
||-.+.|. ++++.+.+..-... ..++ | +.--...+++|+. .++..+..||..+. ...++|
T Consensus 202 ~g~~i~P~a~~~dg~l~v~~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~v~I~~----~~~~~~~iDGE~~~-~~p~~i 276 (295)
T d2bona1 202 GGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQA----PHDITFNLDGEPLS-GQNFHI 276 (295)
T ss_dssp TTBCSCTTCCTTSSCEEEEEECCSSCCHHHHHHHHTTCCCTTEEEEEESEEEEEE----EEEEEEEETTEEEE-EEEEEE
T ss_pred CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEE----CCCCEEEECCCCCC-CCCEEE
T ss_conf 8965587777777846999974267999999986466789988999968999994----89897993689898-986599
Q ss_pred EECCCCCEEEEECCCCCH
Q ss_conf 987995189996488889
Q gi|254780754|r 236 TQSSDITMRILSDSHRSW 253 (264)
Q Consensus 236 ~~s~~~~~~li~~~~~~f 253 (264)
+..++ .++++.+.+..+
T Consensus 277 ~v~P~-aL~vlvP~~~p~ 293 (295)
T d2bona1 277 EILPA-ALRCRLPPDCPL 293 (295)
T ss_dssp EEEEE-EEEEEECTTCTT
T ss_pred EEECC-EEEEECCCCCCC
T ss_conf 99979-899988899866
No 5
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.65 E-value=0.039 Score=30.73 Aligned_cols=52 Identities=21% Similarity=0.342 Sum_probs=35.9
Q ss_pred HHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC----------CCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 5577999987954899999997412872994153----------4332010445878999866420
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNC----------GSVGFLMNEYCIENLVERLSVA 90 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~----------G~lGFL~~~~~~~~~~~~l~~~ 90 (264)
.+.|.+++||||||+-.+.. +....+|++||-. =+.||-+. .+.+.+.++.+
T Consensus 92 ~~I~~li~iGG~~s~~~a~~-L~~~~~~vvgIPkTIDNDl~~td~t~Gf~TA---~~~~~~~i~~l 153 (319)
T d4pfka_ 92 HGIQGLVVIGGDGSYQGAKK-LTEHGFPCVGVPGTIDNDIPGTDFTIGFDTA---LNTVIDAIDKI 153 (319)
T ss_dssp HTCCEEEEEECHHHHHHHHH-HHHTTCCEEEEEBCSSCCCTTCSSCBTHHHH---HHHHHHHHHHH
T ss_pred HCCCEEEEECCCHHHHHHHH-HHHCCCCEEEEEEECCCCCCCCCCCCCHHHH---HHHHHHHHHHH
T ss_conf 33663899538368999999-8733675552210216886785663108999---99999999998
No 6
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]}
Probab=94.26 E-value=0.041 Score=30.58 Aligned_cols=52 Identities=29% Similarity=0.583 Sum_probs=36.2
Q ss_pred HHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC-------C---CCCCCCCCCCHHHHHHHHHHC
Q ss_conf 5577999987954899999997412872994153-------4---332010445878999866420
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNC-------G---SVGFLMNEYCIENLVERLSVA 90 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~-------G---~lGFL~~~~~~~~~~~~l~~~ 90 (264)
.+.|.+++||||||+-.|.+ +.+..+|++||=- | +.||-+. .+.+.+.++.+
T Consensus 93 ~~I~~li~iGG~~s~~~a~~-l~~~~~~vigiPkTIDNDl~~td~s~Gf~TA---~~~~~~~i~~l 154 (320)
T d1pfka_ 93 RGIDALVVIGGDGSYMGAMR-LTEMGFPCIGLPGTIDNDIKGTDYTIGFFTA---LSTVVEAIDRL 154 (320)
T ss_dssp TTCCEEEEEECHHHHHHHHH-HHHTTCCEEEEEBCTTCCCTTCSCCBTHHHH---HHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHH-HHHCCCCEEEEEEEECCCCCCCCCCCCHHHH---HHHHHHHHHHH
T ss_conf 69988999679658999999-8751665222301431788886788834889---99999999998
No 7
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=93.81 E-value=0.081 Score=28.72 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=31.4
Q ss_pred HCCEEEEECCCHHHHHHHHHHH-----HCCCEEEEECC-------C-----CCCCCC
Q ss_conf 5779999879548999999974-----12872994153-------4-----332010
Q gi|254780754|r 36 EADVIVVLGGDGFMLQSFHQSK-----EYDKPIYGMNC-------G-----SVGFLM 75 (264)
Q Consensus 36 ~~Dlii~iGGDGT~L~a~~~~~-----~~~~PilGIn~-------G-----~lGFL~ 75 (264)
+.|.+|+||||||+-.|..... ..+++|+||=. | +.||-+
T Consensus 163 ~Id~LviIGGd~S~~~a~~Lae~~~~~~~~i~vigvPKTIDNDl~~~~~d~s~GfdT 219 (550)
T d2f48a1 163 NLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDS 219 (550)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEHHH
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHH
T ss_conf 888799989837999999999999971899628970244367877765566542778
No 8
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=92.60 E-value=0.078 Score=28.81 Aligned_cols=66 Identities=17% Similarity=0.216 Sum_probs=42.5
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHC----------CCCCHHHCCEEEEECCCHH-------HHHHHHHHHHCCCEEEEEC
Q ss_conf 5059999559989999999999870----------7888455779999879548-------9999999741287299415
Q gi|254780754|r 5 IQKIHFKASNAKKAQEAYDKFVKIY----------GNSTSEEADVIVVLGGDGF-------MLQSFHQSKEYDKPIYGMN 67 (264)
Q Consensus 5 ~~ki~i~~~~~~~a~~~~~~l~~~~----------~~~~~~~~Dlii~iGGDGT-------~L~a~~~~~~~~~PilGIn 67 (264)
|+||.++.+...-...+.+.|.+.- .....+++|.+|.-||.+. +-...+.....++|+|||=
T Consensus 1 m~ki~iiD~g~~~~~~i~r~l~~lg~~~~i~~~d~~~~~~~~~dgiIl~Gg~~~~~~~~~~~~~l~~~~~~~~~PilGIC 80 (196)
T d2a9va1 1 MLKIYVVDNGGQWTHREWRVLRELGVDTKIVPNDIDSSELDGLDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGIC 80 (196)
T ss_dssp CCBEEEEEESCCTTCHHHHHHHHTTCBCCEEETTSCGGGGTTCSEEEEEEECSCGGGTGGGHHHHHHHHHHCCSCEEEET
T ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
T ss_conf 98899998987299999999997898699993989989972688079933653111021024557777752581589760
Q ss_pred CCC
Q ss_conf 343
Q gi|254780754|r 68 CGS 70 (264)
Q Consensus 68 ~G~ 70 (264)
.|.
T Consensus 81 ~G~ 83 (196)
T d2a9va1 81 VGA 83 (196)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 000
No 9
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Probab=90.32 E-value=0.52 Score=23.60 Aligned_cols=47 Identities=17% Similarity=0.053 Sum_probs=35.9
Q ss_pred HCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHH
Q ss_conf 57799998795489999999741287299415343320104458789
Q gi|254780754|r 36 EADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIEN 82 (264)
Q Consensus 36 ~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~G~lGFL~~~~~~~~ 82 (264)
+||+|+++|.-.+.|-++-.+...++|+.-+..|-+.+-.++-.+|+
T Consensus 88 kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rsg~~~~~~~de 134 (373)
T d1v4va_ 88 GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGNLKEPFPEE 134 (373)
T ss_dssp TCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSCTTSSTTHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHH
T ss_conf 76400111367531037788987621222413434554335676166
No 10
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]}
Probab=89.56 E-value=0.26 Score=25.55 Aligned_cols=66 Identities=15% Similarity=0.296 Sum_probs=40.4
Q ss_pred CEEEEEEECC--CHHHHHHHHHHHH----HCCCCCHHHCCEEEEECCCHH----------HHHHHHHHHHCCCEEEEECC
Q ss_conf 5059999559--9899999999998----707888455779999879548----------99999997412872994153
Q gi|254780754|r 5 IQKIHFKASN--AKKAQEAYDKFVK----IYGNSTSEEADVIVVLGGDGF----------MLQSFHQSKEYDKPIYGMNC 68 (264)
Q Consensus 5 ~~ki~i~~~~--~~~a~~~~~~l~~----~~~~~~~~~~Dlii~iGGDGT----------~L~a~~~~~~~~~PilGIn~ 68 (264)
|+||++++-+ ..+..+.++.+-. .-..+..+++|.+|.-||-.+ +..+++.+...++|+|||=.
T Consensus 1 m~~igv~~~~G~~~~~~~al~~~G~~~~~i~~~~~l~~~D~lIlPGG~~~~~~~~~~~~~~~~~I~~~~~~g~pilGIC~ 80 (195)
T d2nv0a1 1 MLTIGVLGLQGAVREHIHAIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCA 80 (195)
T ss_dssp CCEEEEECSSSCCHHHHHHHHHTTCEEEEECSGGGGGGCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETH
T ss_pred CCEEEEEECCCHHHHHHHHHHHCCCCEEEECCHHHHHHCCEEEECCCCCCHHHHHHHHCHHCCHHHHHHHHCCEEEECCC
T ss_conf 92999996288299999999987991999899899831887997799844799974431001034433220212440055
Q ss_pred CC
Q ss_conf 43
Q gi|254780754|r 69 GS 70 (264)
Q Consensus 69 G~ 70 (264)
|.
T Consensus 81 G~ 82 (195)
T d2nv0a1 81 GL 82 (195)
T ss_dssp HH
T ss_pred CH
T ss_conf 67
No 11
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}
Probab=88.58 E-value=0.49 Score=23.77 Aligned_cols=39 Identities=10% Similarity=0.020 Sum_probs=35.0
Q ss_pred HHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 557799998795489999999741287299415343320
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGF 73 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~G~lGF 73 (264)
.+||+++++|.-.+.|-++-.+...++|++-|..|-+.+
T Consensus 87 ~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s~ 125 (377)
T d1o6ca_ 87 IKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTG 125 (377)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCCS
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 366536764034543015666531142279995145654
No 12
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.96 E-value=0.34 Score=24.77 Aligned_cols=39 Identities=28% Similarity=0.482 Sum_probs=33.2
Q ss_pred CCCHHHCCEEEEECCCHH-----HHHHHHHHHHCCCEEEEECCC
Q ss_conf 888455779999879548-----999999974128729941534
Q gi|254780754|r 31 NSTSEEADVIVVLGGDGF-----MLQSFHQSKEYDKPIYGMNCG 69 (264)
Q Consensus 31 ~~~~~~~Dlii~iGGDGT-----~L~a~~~~~~~~~PilGIn~G 69 (264)
.+..+++|-|++-||=|+ .+.|++.+...++|+|||=+|
T Consensus 52 ~~~L~~~dGIlvPGGFG~RG~eGki~ai~yARen~iPfLGIClG 95 (258)
T d1s1ma1 52 VEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLG 95 (258)
T ss_dssp TTTTTTCSEEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 32112346288513567677889999999999748617888888
No 13
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]}
Probab=87.19 E-value=0.5 Score=23.70 Aligned_cols=65 Identities=12% Similarity=0.239 Sum_probs=35.9
Q ss_pred EEEEEEECCC--HHH-HHHHHHHHHHC--------CCCCHHHCCEEEEEC-CC-HH---------HHHHHHHHHHCCCEE
Q ss_conf 0599995599--899-99999999870--------788845577999987-95-48---------999999974128729
Q gi|254780754|r 6 QKIHFKASNA--KKA-QEAYDKFVKIY--------GNSTSEEADVIVVLG-GD-GF---------MLQSFHQSKEYDKPI 63 (264)
Q Consensus 6 ~ki~i~~~~~--~~a-~~~~~~l~~~~--------~~~~~~~~Dlii~iG-GD-GT---------~L~a~~~~~~~~~Pi 63 (264)
|||+++.... -.+ .+..+++-..+ .....+.+|.+|.=| |- ++ +..+.+.+...++|+
T Consensus 1 MKI~IiDyg~gN~~si~~al~~~g~~~~~~~~~~~~~~~~~~~D~lIlPG~G~f~~~~~~l~~~~~~~~i~~~~~~~~Pi 80 (200)
T d1k9vf_ 1 MRIGIISVGPGNIMNLYRGVKRASENFEDVSIELVESPRNDLYDLLFIPGVGHFGEGMRRLRENDLIDFVRKHVEDERYV 80 (200)
T ss_dssp CEEEEECSSSSCCHHHHHHHHHHTTTSSSCEEEEESSSCSCCCSEEEECCCSCHHHHHHHHHHTTCHHHHHHHHHTTCEE
T ss_pred CEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
T ss_conf 98999907986899999999985300451137980775760057479717078788887531023312121113455158
Q ss_pred EEECCCC
Q ss_conf 9415343
Q gi|254780754|r 64 YGMNCGS 70 (264)
Q Consensus 64 lGIn~G~ 70 (264)
|||=.|.
T Consensus 81 LGIClG~ 87 (200)
T d1k9vf_ 81 VGVCLGM 87 (200)
T ss_dssp EEETHHH
T ss_pred EEEECCE
T ss_conf 9873242
No 14
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]}
Probab=87.09 E-value=0.87 Score=22.22 Aligned_cols=64 Identities=23% Similarity=0.323 Sum_probs=38.7
Q ss_pred CCEEEEEEECC-CHHHHHHHHHHHHHCC--------CCCHHHCCEEEEECCCHHH----------HHHHHHHHHCCCEEE
Q ss_conf 65059999559-9899999999998707--------8884557799998795489----------999999741287299
Q gi|254780754|r 4 NIQKIHFKASN-AKKAQEAYDKFVKIYG--------NSTSEEADVIVVLGGDGFM----------LQSFHQSKEYDKPIY 64 (264)
Q Consensus 4 ~~~ki~i~~~~-~~~a~~~~~~l~~~~~--------~~~~~~~Dlii~iGGDGT~----------L~a~~~~~~~~~Pil 64 (264)
.-|||+|++-. +. .+..+-+.+ .+ .++.+++|.+|.=||..+. +.+++.+...++|+|
T Consensus 5 ~~mkIgii~~~Gn~--~s~~~al~~-~G~~~~~v~~~~~l~~~D~lIlPGG~~~~~~~~l~~~~l~~~I~~~~~~gkPiL 81 (202)
T d1q7ra_ 5 SNMKIGVLGLQGAV--REHVRAIEA-CGAEAVIVKKSEQLEGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMF 81 (202)
T ss_dssp CCCEEEEESCGGGC--HHHHHHHHH-TTCEEEEECSGGGGTTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCH--HHHHHHHHH-CCCCEEEECCHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 69879999789989--999999998-799299989989971289899879884799987666678998865222231466
Q ss_pred EECCCC
Q ss_conf 415343
Q gi|254780754|r 65 GMNCGS 70 (264)
Q Consensus 65 GIn~G~ 70 (264)
||=.|.
T Consensus 82 GIClG~ 87 (202)
T d1q7ra_ 82 GTCAGL 87 (202)
T ss_dssp EETTHH
T ss_pred EEEHHH
T ss_conf 520135
No 15
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=86.53 E-value=0.15 Score=27.03 Aligned_cols=35 Identities=26% Similarity=0.441 Sum_probs=30.3
Q ss_pred HHCCEEEEECCCHH-----HHHHHHHHHHCCCEEEEECCC
Q ss_conf 55779999879548-----999999974128729941534
Q gi|254780754|r 35 EEADVIVVLGGDGF-----MLQSFHQSKEYDKPIYGMNCG 69 (264)
Q Consensus 35 ~~~Dlii~iGGDGT-----~L~a~~~~~~~~~PilGIn~G 69 (264)
+++|-|++-||=|. .+.|++.+...++|+|||=+|
T Consensus 57 ~~~dGIlvPGGFG~rG~eGki~ai~yARen~iPfLGIClG 96 (250)
T d1vcoa1 57 RDVSGILVPGGFGVRGIEGKVRAAQYARERKIPYLGICLG 96 (250)
T ss_dssp TTCSCEEECCCCSSTTHHHHHHHHHHHHHTTCCEEEETHH
T ss_pred HCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 2488289568877663578999999998736169999887
No 16
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
Probab=86.32 E-value=0.95 Score=21.96 Aligned_cols=39 Identities=18% Similarity=0.094 Sum_probs=34.9
Q ss_pred HHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 557799998795489999999741287299415343320
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGF 73 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~G~lGF 73 (264)
.+||+++++|...+.|-++-.+...++|+.-|..|-+.+
T Consensus 85 ~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~ 123 (376)
T d1f6da_ 85 FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTG 123 (376)
T ss_dssp HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCS
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_conf 567622431034431368999874075389985244654
No 17
>d1jvna2 c.23.16.1 (A:-3-229) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Baker's yeast (Saccharomyces cerevisiae), His7 [TaxId: 4932]}
Probab=82.96 E-value=0.52 Score=23.63 Aligned_cols=68 Identities=16% Similarity=0.291 Sum_probs=39.8
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHC---------CCCCHHHCCEEEEEC-CC-HHH---------HHHHHHHHHCCCE
Q ss_conf 765059999559989999999999870---------788845577999987-95-489---------9999997412872
Q gi|254780754|r 3 RNIQKIHFKASNAKKAQEAYDKFVKIY---------GNSTSEEADVIVVLG-GD-GFM---------LQSFHQSKEYDKP 62 (264)
Q Consensus 3 ~~~~ki~i~~~~~~~a~~~~~~l~~~~---------~~~~~~~~Dlii~iG-GD-GT~---------L~a~~~~~~~~~P 62 (264)
-+|++|.|+....-.-..+.+-|.+.- .....+++|.+|.=| |- ++. ..+.+.+...++|
T Consensus 2 ~~m~~I~IiDyg~gN~~Sv~~al~~lG~~~~ii~~~~~~~l~~~d~IILPGvG~f~~~m~~L~~~~l~~~i~~~~~~~~p 81 (232)
T d1jvna2 2 SHMPVVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKP 81 (232)
T ss_dssp CSSCEEEEECCSCSCCHHHHHHHHHTTCEEEEESSGGGCCSTTCSCEEEEECSCHHHHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHHHCCCCE
T ss_conf 98999999978986899999999986997699988427656228869980478750033420020000011232128927
Q ss_pred EEEECCCC
Q ss_conf 99415343
Q gi|254780754|r 63 IYGMNCGS 70 (264)
Q Consensus 63 ilGIn~G~ 70 (264)
+|||=.|.
T Consensus 82 ilGIClGm 89 (232)
T d1jvna2 82 IMGICVGL 89 (232)
T ss_dssp EEEEEHHH
T ss_pred EEECCCCH
T ss_conf 88405245
No 18
>d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]}
Probab=80.37 E-value=1.3 Score=21.01 Aligned_cols=39 Identities=21% Similarity=0.362 Sum_probs=31.3
Q ss_pred CHHHCCEEEEECCCHH--------HHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 8455779999879548--------99999997412872994153433
Q gi|254780754|r 33 TSEEADVIVVLGGDGF--------MLQSFHQSKEYDKPIYGMNCGSV 71 (264)
Q Consensus 33 ~~~~~Dlii~iGGDGT--------~L~a~~~~~~~~~PilGIn~G~l 71 (264)
.+++.|.+++.||.|+ ++..++.+...++|+.+|..|..
T Consensus 61 ~~~~yDalivpGG~~~~~l~~~~~~~~~i~~~~~~~k~i~aiC~g~~ 107 (170)
T d1oi4a1 61 TPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQ 107 (170)
T ss_dssp CGGGCSEEEECCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHH
T ss_pred CHHHCEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCHH
T ss_conf 95156299972404665642483789999988631781452022347
No 19
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=78.03 E-value=1.8 Score=20.26 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=31.5
Q ss_pred CHHHCCEEEEECCCHH--------HHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 8455779999879548--------99999997412872994153433
Q gi|254780754|r 33 TSEEADVIVVLGGDGF--------MLQSFHQSKEYDKPIYGMNCGSV 71 (264)
Q Consensus 33 ~~~~~Dlii~iGGDGT--------~L~a~~~~~~~~~PilGIn~G~l 71 (264)
.++++|.+++.||.|. +++.++.+...++|+.+|..|..
T Consensus 58 ~~~~~d~viipGg~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~ 104 (166)
T d1g2ia_ 58 NPEEFDALVLPGGRAPERVRLNEKAVSIARKMFSEGKPVASICHGPQ 104 (166)
T ss_dssp CGGGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTTH
T ss_pred CCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCH
T ss_conf 82435189980334133312485778999998852874520366414
No 20
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=76.60 E-value=2.1 Score=19.73 Aligned_cols=63 Identities=22% Similarity=0.375 Sum_probs=38.6
Q ss_pred CEEEEEEECCCH-HH----HHHHHHHHHH------CCC---C-------------CHHHCCEEEEECCCHHHHHHHHHHH
Q ss_conf 505999955998-99----9999999987------078---8-------------8455779999879548999999974
Q gi|254780754|r 5 IQKIHFKASNAK-KA----QEAYDKFVKI------YGN---S-------------TSEEADVIVVLGGDGFMLQSFHQSK 57 (264)
Q Consensus 5 ~~ki~i~~~~~~-~a----~~~~~~l~~~------~~~---~-------------~~~~~Dlii~iGGDGT~L~a~~~~~ 57 (264)
.+|+.+++++.- +. +++.+.|.+. |+. + ...++|+||.+|| |+.+-+++...
T Consensus 34 ~~rvliVt~~~~~~~~g~~~~l~~~L~~~gi~~~~f~~v~~~pt~~~v~~~~~~~~~~~~D~IIavGG-Gs~iD~aK~ia 112 (398)
T d1vlja_ 34 IRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGG-GSVVDSAKAVA 112 (398)
T ss_dssp CCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEES-HHHHHHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCC-CCHHHHHHHHH
T ss_conf 98489998974787731999999999865991999867159989899998764114566766884488-63112788889
Q ss_pred -------------------HCCCEEEEECC
Q ss_conf -------------------12872994153
Q gi|254780754|r 58 -------------------EYDKPIYGMNC 68 (264)
Q Consensus 58 -------------------~~~~PilGIn~ 68 (264)
...+|++.|.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~P~i~iPT 142 (398)
T d1vlja_ 113 AGALYEGDIWDAFIGKYQIEKALPIFDVLT 142 (398)
T ss_dssp HHTTCSSCGGGGGGTSCCCCCCCCEEEEEC
T ss_pred HHHHCCCCHHHHHCCCCCCCCCCCEEEEEC
T ss_conf 886414556776436644367787335414
No 21
>d1wl8a1 c.23.16.1 (A:1-188) GMP synthase subunit A, GuaAA {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=73.88 E-value=2.3 Score=19.59 Aligned_cols=65 Identities=15% Similarity=0.244 Sum_probs=42.3
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCC-------CCCHH-----HCCEEEEECCCH-----HHHHHHHHHHHCCCEEEEECC
Q ss_conf 0599995599899999999998707-------88845-----577999987954-----899999997412872994153
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYG-------NSTSE-----EADVIVVLGGDG-----FMLQSFHQSKEYDKPIYGMNC 68 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~-------~~~~~-----~~Dlii~iGGDG-----T~L~a~~~~~~~~~PilGIn~ 68 (264)
|.|.++.+...-...+.+.|.+.-- ....+ ++|-++.=||.+ ......+.+...++|+|||=.
T Consensus 1 mmI~iiD~g~~~~~~i~~~L~~~G~~~~v~~~~~~~~~~~~~~~~gvilsgg~~~~~~~~~~~~i~~~~~~~~PiLGICl 80 (188)
T d1wl8a1 1 MMIVIMDNGGQYVHRIWRTLRYLGVETKIIPNTTPLEEIKAMNPKGIIFSGGPSLENTGNCEKVLEHYDEFNVPILGICL 80 (188)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHTTCEEEEEETTCCHHHHHHTCCSEEEECCCSCTTCCTTHHHHHHTGGGTCSCEEEETH
T ss_pred CEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHH
T ss_conf 98999989983899999999977996999969998899864236624421676410345431011101112201222256
Q ss_pred CC
Q ss_conf 43
Q gi|254780754|r 69 GS 70 (264)
Q Consensus 69 G~ 70 (264)
|.
T Consensus 81 G~ 82 (188)
T d1wl8a1 81 GH 82 (188)
T ss_dssp HH
T ss_pred HH
T ss_conf 66
No 22
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=73.42 E-value=2.3 Score=19.58 Aligned_cols=21 Identities=24% Similarity=0.415 Sum_probs=16.3
Q ss_pred HCCEEEEECCCHHHHHHHHHHH
Q ss_conf 5779999879548999999974
Q gi|254780754|r 36 EADVIVVLGGDGFMLQSFHQSK 57 (264)
Q Consensus 36 ~~Dlii~iGGDGT~L~a~~~~~ 57 (264)
++|+||.+|| |..+-+++-..
T Consensus 87 ~~D~IiaiGG-GS~iD~aK~ia 107 (385)
T d1rrma_ 87 GADYLIAIGG-GSPQDTCKAIG 107 (385)
T ss_dssp TCSEEEEEES-HHHHHHHHHHH
T ss_pred CCCEEEECCC-CCHHHHHHHHH
T ss_conf 8888986698-84226999999
No 23
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]}
Probab=72.92 E-value=1.3 Score=21.06 Aligned_cols=39 Identities=31% Similarity=0.406 Sum_probs=26.1
Q ss_pred CCHHHCCEEEEECCCHH--------HH----HHHHHHHHCCCEEEEECCCC
Q ss_conf 88455779999879548--------99----99999741287299415343
Q gi|254780754|r 32 STSEEADVIVVLGGDGF--------ML----QSFHQSKEYDKPIYGMNCGS 70 (264)
Q Consensus 32 ~~~~~~Dlii~iGGDGT--------~L----~a~~~~~~~~~PilGIn~G~ 70 (264)
.+.+++|.+|+.||-+. .+ ...+.+...++|+|||=.|.
T Consensus 44 ~~l~~~d~iii~Ggp~~~~d~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~ 94 (230)
T d1o1ya_ 44 RPLEEYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGS 94 (230)
T ss_dssp SCGGGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHH
T ss_pred CCHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCH
T ss_conf 664337889982997655641004555789999999997311078760579
No 24
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=72.91 E-value=2.2 Score=19.71 Aligned_cols=33 Identities=33% Similarity=0.517 Sum_probs=27.3
Q ss_pred HHCCEEEEECCCHHHHHHHHHHH-HCCCEEEEECC
Q ss_conf 55779999879548999999974-12872994153
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSK-EYDKPIYGMNC 68 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~-~~~~PilGIn~ 68 (264)
+++|+||.+|| |+.+-+++... ..++|++.|-+
T Consensus 82 ~~~D~IIavGG-Gs~~D~aK~ia~~~~~P~I~IPT 115 (364)
T d1kq3a_ 82 EETDVVVGIGG-GKTLDTAKAVAYKLKKPVVIVPT 115 (364)
T ss_dssp TTCCEEEEEES-HHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCCEEEEECC-CCCCEEECCCCCCCCCCCEEECC
T ss_conf 05768998136-75410101223334210124225
No 25
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=72.31 E-value=1.6 Score=20.56 Aligned_cols=38 Identities=16% Similarity=0.344 Sum_probs=30.3
Q ss_pred CHHHCCEEEEECCCHH-------HHHHHHHHHHCCCEEEEECCCC
Q ss_conf 8455779999879548-------9999999741287299415343
Q gi|254780754|r 33 TSEEADVIVVLGGDGF-------MLQSFHQSKEYDKPIYGMNCGS 70 (264)
Q Consensus 33 ~~~~~Dlii~iGGDGT-------~L~a~~~~~~~~~PilGIn~G~ 70 (264)
..+++|++++.||.|. ++..++.+...++++.+|.+|.
T Consensus 60 ~~~~~D~liipGG~~~~~~~~~~l~~~lr~~~~~~~~i~aiC~g~ 104 (188)
T d2fexa1 60 DPVDIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAA 104 (188)
T ss_dssp CTTTCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHH
T ss_pred CHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHH
T ss_conf 930335899647766433441999999999997399799745026
No 26
>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=71.65 E-value=1.6 Score=20.52 Aligned_cols=61 Identities=16% Similarity=0.111 Sum_probs=35.3
Q ss_pred CCEEEEEEECCC----HHHHHHHHHHHHHCCCCCHHHCCEEEEEC-CC-HHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 650599995599----89999999999870788845577999987-95-48999999974128729941534
Q gi|254780754|r 4 NIQKIHFKASNA----KKAQEAYDKFVKIYGNSTSEEADVIVVLG-GD-GFMLQSFHQSKEYDKPIYGMNCG 69 (264)
Q Consensus 4 ~~~ki~i~~~~~----~~a~~~~~~l~~~~~~~~~~~~Dlii~iG-GD-GT~L~a~~~~~~~~~PilGIn~G 69 (264)
+|||+.++.+.. +.-.+.++++-+.+.+. .+-++.| |. |-|=.+++-+...+-.++||...
T Consensus 1 ~~k~v~Vf~gs~~~~~~~~~~~a~~lg~~La~~-----g~~lv~GGG~~GlMga~a~ga~~~gg~viGv~~~ 67 (181)
T d1ydhb_ 1 RFRKICVFCGSHSGHREVFSDAAIELGNELVKR-----KIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPK 67 (181)
T ss_dssp CCSEEEEECCSCCCSSTHHHHHHHHHHHHHHHT-----TCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEEG
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC-----CCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 986799986578995978999999999999987-----9829989984178899987676469863011124
No 27
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Probab=70.46 E-value=2 Score=19.87 Aligned_cols=22 Identities=14% Similarity=0.110 Sum_probs=8.6
Q ss_pred CCEEEEECCCCHHHHHHHCCCE
Q ss_conf 3507982266504467522981
Q gi|254780754|r 152 CDGLVVSTPIGSTAYNFSALGP 173 (264)
Q Consensus 152 ~DGvivSTptGSTAY~lSaGGp 173 (264)
+|.+|--...||+.=++.+|=|
T Consensus 303 ~~~~I~hgG~~t~~Eal~~GvP 324 (401)
T d1rrva_ 303 VAAVIHHGSAGTEHVATRAGVP 324 (401)
T ss_dssp SSEEEECCCHHHHHHHHHHTCC
T ss_pred CCEEEECCCCHHHHHHHHHCCC
T ss_conf 2488861772489999983999
No 28
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=68.08 E-value=2.7 Score=19.13 Aligned_cols=22 Identities=27% Similarity=0.377 Sum_probs=17.3
Q ss_pred HHCCEEEEECCCHHHHHHHHHHH
Q ss_conf 55779999879548999999974
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSK 57 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~ 57 (264)
.++|+||.+|| |+.+-+++...
T Consensus 85 ~~~D~IIavGG-Gs~iD~aK~ia 106 (359)
T d1o2da_ 85 DSFDFVVGLGG-GSPMDFAKAVA 106 (359)
T ss_dssp SCCSEEEEEES-HHHHHHHHHHH
T ss_pred CCCCEEEECCC-CCCHHHHHHHH
T ss_conf 57756885166-42001899999
No 29
>d1ujna_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Thermus thermophilus [TaxId: 274]}
Probab=66.20 E-value=2.7 Score=19.08 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=24.8
Q ss_pred CCHHHCCEEEEECCCHHHHHHHHHHH---HCCCEEEEECC
Q ss_conf 88455779999879548999999974---12872994153
Q gi|254780754|r 32 STSEEADVIVVLGGDGFMLQSFHQSK---EYDKPIYGMNC 68 (264)
Q Consensus 32 ~~~~~~Dlii~iGGDGT~L~a~~~~~---~~~~PilGIn~ 68 (264)
...+..|+++++|| |++.-.+..+. ..++|++-|-+
T Consensus 80 ~~~~r~~~iiaiGG-G~v~D~agf~A~~y~rgi~~i~vPT 118 (347)
T d1ujna_ 80 KGLPRNATLLVVGG-GTLTDLGGFVAATYLRGVAYLAFPT 118 (347)
T ss_dssp HTCCTTCEEEEEES-HHHHHHHHHHHHHBTTCCEEEEEEC
T ss_pred HHCCCCCCEEEEEC-HHHHHHHHHHHHHHCCCCCEEECCC
T ss_conf 32035653368603-3233578887654317850340365
No 30
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=62.08 E-value=2.5 Score=19.27 Aligned_cols=28 Identities=21% Similarity=0.333 Sum_probs=10.1
Q ss_pred HCCEEEEECCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf 5779999879548999999974128729941
Q gi|254780754|r 36 EADVIVVLGGDGFMLQSFHQSKEYDKPIYGM 66 (264)
Q Consensus 36 ~~Dlii~iGGDGT~L~a~~~~~~~~~PilGI 66 (264)
.+|++++ |-....+...+...++|....
T Consensus 112 ~~d~vi~---d~~~~~~~~~a~~~~~p~~~~ 139 (461)
T d2acva1 112 KVVGLVL---DFFCVSMIDVGNEFGIPSYLF 139 (461)
T ss_dssp TEEEEEE---EGGGGGGHHHHHHTTCCEEEE
T ss_pred CCEEEEE---ECCCHHHHHHHHHHCCCEEEE
T ss_conf 8839997---044569999999838870897
No 31
>d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]}
Probab=60.57 E-value=4.7 Score=17.60 Aligned_cols=66 Identities=18% Similarity=0.198 Sum_probs=40.6
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHC-------CCCCHHHCCEEEEECCCH-----------HHHHHHHHHHHCCCEEEEEC
Q ss_conf 059999559989999999999870-------788845577999987954-----------89999999741287299415
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIY-------GNSTSEEADVIVVLGGDG-----------FMLQSFHQSKEYDKPIYGMN 67 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~-------~~~~~~~~Dlii~iGGDG-----------T~L~a~~~~~~~~~PilGIn 67 (264)
||+.|+......-+.+.+.+.+.- ..++.+++|.+|.-||=. -+..........++|+|||=
T Consensus 1 Mki~IiD~G~gN~~si~~~l~~lg~~~~i~~~~~~i~~~d~lIlpG~g~~~~~~~~~~~~~~~~~~~~~~~~g~pilGiC 80 (195)
T d1ka9h_ 1 MKALLIDYGSGNLRSAAKALEAAGFSVAVAQDPKAHEEADLLVLPGQGHFGQVMRAFQESGFVERVRRHLERGLPFLGIC 80 (195)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHTTCEEEEESSTTSCSSCSEEEECCCSCHHHHHHTTSSSCTHHHHHHHHHTTCCEEECT
T ss_pred CEEEEEECCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 98999907974999999999987981999889999998765413787565413331123687311110014431125443
Q ss_pred CCCC
Q ss_conf 3433
Q gi|254780754|r 68 CGSV 71 (264)
Q Consensus 68 ~G~l 71 (264)
.|..
T Consensus 81 lG~q 84 (195)
T d1ka9h_ 81 VGMQ 84 (195)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 2121
No 32
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]}
Probab=60.39 E-value=1.2 Score=21.40 Aligned_cols=68 Identities=15% Similarity=0.116 Sum_probs=43.3
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHCCC-------CCH-----HHCCEEEEECCCHHH-----HHHHHHHHHCCCEEEE
Q ss_conf 76505999955998999999999987078-------884-----557799998795489-----9999997412872994
Q gi|254780754|r 3 RNIQKIHFKASNAKKAQEAYDKFVKIYGN-------STS-----EEADVIVVLGGDGFM-----LQSFHQSKEYDKPIYG 65 (264)
Q Consensus 3 ~~~~ki~i~~~~~~~a~~~~~~l~~~~~~-------~~~-----~~~Dlii~iGGDGT~-----L~a~~~~~~~~~PilG 65 (264)
.+-+||.++..-..-...+.+.+.+.--+ ... ..+|-++.-||-|.. ..........++|+||
T Consensus 3 ~~~~kI~IiD~G~~~~~~I~r~lr~lg~~~~I~~~d~~~~~~~~~~~~giils~gp~~~~~~~~~~~~~~~~~~~~PiLG 82 (205)
T d1gpma2 3 IHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFG 82 (205)
T ss_dssp TTSSEEEEEECSCTTHHHHHHHHHHTTCEEEEEESCCCHHHHHHHCCSEEEECCCSSCTTSTTCCCCCGGGGTSSSCEEE
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 76481999989864999999999987988999879999899720189867856988754101234678999707998899
Q ss_pred ECCCC
Q ss_conf 15343
Q gi|254780754|r 66 MNCGS 70 (264)
Q Consensus 66 In~G~ 70 (264)
|=.|+
T Consensus 83 IClG~ 87 (205)
T d1gpma2 83 VCYGM 87 (205)
T ss_dssp ETHHH
T ss_pred ECCCH
T ss_conf 63332
No 33
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}
Probab=60.12 E-value=4.7 Score=17.55 Aligned_cols=66 Identities=21% Similarity=0.205 Sum_probs=41.8
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 59999559989999999999870788845577999987954899999997412872994153433201044587899986
Q gi|254780754|r 7 KIHFKASNAKKAQEAYDKFVKIYGNSTSEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVER 86 (264)
Q Consensus 7 ki~i~~~~~~~a~~~~~~l~~~~~~~~~~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~G~lGFL~~~~~~~~~~~~ 86 (264)
.+.++....+++.+...+.. ..+.+|++|+=||-+.+|+. ..++||+.|. .+..|+..+
T Consensus 28 ~i~v~~~~~e~av~~~~~~~------~~~~~DviISRG~ta~~ir~-----~~~iPVV~I~----------vs~~Dil~a 86 (186)
T d2pjua1 28 NITPIQLGFEKAVTYIRKKL------ANERCDAIIAAGSNGAYLKS-----RLSVPVILIK----------PSGYDVLQF 86 (186)
T ss_dssp EEEEECCCHHHHHHHHHHHT------TTSCCSEEEEEHHHHHHHHT-----TCSSCEEEEC----------CCHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHH------HCCCCCEEEECCHHHHHHHH-----HCCCCEEEEC----------CCHHHHHHH
T ss_conf 29965074788999999998------70899899979638999998-----6899879970----------887689999
Q ss_pred HHHCCCC
Q ss_conf 6420124
Q gi|254780754|r 87 LSVAVEC 93 (264)
Q Consensus 87 l~~~~~~ 93 (264)
|..+...
T Consensus 87 l~~a~~~ 93 (186)
T d2pjua1 87 LAKAGKL 93 (186)
T ss_dssp HHHTTCT
T ss_pred HHHHHHH
T ss_conf 9999975
No 34
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=59.41 E-value=3.2 Score=18.62 Aligned_cols=63 Identities=19% Similarity=0.242 Sum_probs=41.2
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCCC-------CCH-----HHCCEEEEECCCHH------HHHHHHHHHHCCCEEEEEC
Q ss_conf 05999955998999999999987078-------884-----55779999879548------9999999741287299415
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYGN-------STS-----EEADVIVVLGGDGF------MLQSFHQSKEYDKPIYGMN 67 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~~-------~~~-----~~~Dlii~iGGDGT------~L~a~~~~~~~~~PilGIn 67 (264)
.|+.++.=..+.++ +..+.+.--. ... .++|-||.=||=|. .+..++.+...++|||||=
T Consensus 40 ~~i~~~D~G~k~~i--lr~l~~~~~~~~v~p~~~~~~~i~~~~pdgivlS~GPg~P~~~~~~~~~~~~~~~~~iPILGIC 117 (228)
T d1a9xb2 40 FHVVAYDFGAKRNI--LRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGIC 117 (228)
T ss_dssp EEEEEEESSCCHHH--HHHHHHTTEEEEEEETTCCHHHHHTTCCSEEEECCCSBCSTTCHHHHHHHHHHTTSCCCEEEET
T ss_pred CEEEEEECCCCHHH--HHHHHHCCCEEEECCCCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEE
T ss_conf 16999957872776--7678755965787588899999984499999982887765321127899999981799889997
Q ss_pred CCC
Q ss_conf 343
Q gi|254780754|r 68 CGS 70 (264)
Q Consensus 68 ~G~ 70 (264)
.|+
T Consensus 118 lG~ 120 (228)
T d1a9xb2 118 LGH 120 (228)
T ss_dssp HHH
T ss_pred CCH
T ss_conf 675
No 35
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=58.57 E-value=3 Score=18.78 Aligned_cols=65 Identities=12% Similarity=0.125 Sum_probs=36.7
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHCCC---------CCHH-----HCCEEEEECCCHHH--------HHHHHHHHHCCCE
Q ss_conf 505999955998999999999987078---------8845-----57799998795489--------9999997412872
Q gi|254780754|r 5 IQKIHFKASNAKKAQEAYDKFVKIYGN---------STSE-----EADVIVVLGGDGFM--------LQSFHQSKEYDKP 62 (264)
Q Consensus 5 ~~ki~i~~~~~~~a~~~~~~l~~~~~~---------~~~~-----~~Dlii~iGGDGT~--------L~a~~~~~~~~~P 62 (264)
|..|-|+.+-..=...+...|.+ ++. ...+ ++|-++.-||-|.. ......+...++|
T Consensus 1 ~~~~liiD~~dsft~Ni~~~l~~-lG~~~~vi~~d~~~~~~i~~~~~~gvilsgGp~~~~~~~~~~~~~~i~~~~~~~~P 79 (195)
T d1qdlb_ 1 MDLTLIIDNYDSFVYNIAQIVGE-LGSYPIVIRNDEISIKGIERIDPDRLIISPGPGTPEKREDIGVSLDVIKYLGKRTP 79 (195)
T ss_dssp CCEEEEEECSCSSHHHHHHHHHH-TTCEEEEEETTTSCHHHHHHHCCSEEEECCCSSCTTSHHHHTTHHHHHHHHTTTSC
T ss_pred CCEEEEEECCCCHHHHHHHHHHH-CCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf 97799997888369999999986-89948999489789999984488830027987764110013432666653037987
Q ss_pred EEEECCCC
Q ss_conf 99415343
Q gi|254780754|r 63 IYGMNCGS 70 (264)
Q Consensus 63 ilGIn~G~ 70 (264)
+|||-.|+
T Consensus 80 iLGIClG~ 87 (195)
T d1qdlb_ 80 ILGVCLGH 87 (195)
T ss_dssp EEEETHHH
T ss_pred EEEEEHHH
T ss_conf 78861335
No 36
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=58.44 E-value=5 Score=17.43 Aligned_cols=30 Identities=10% Similarity=0.067 Sum_probs=12.4
Q ss_pred HCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Q ss_conf 577999987954899999997412872994
Q gi|254780754|r 36 EADVIVVLGGDGFMLQSFHQSKEYDKPIYG 65 (264)
Q Consensus 36 ~~Dlii~iGGDGT~L~a~~~~~~~~~PilG 65 (264)
.++.+++..+.-..+.+.........|...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 122 (401)
T d1iira_ 93 GCAAVVTTGLLAAAIGVRSVAEKLGIPYFY 122 (401)
T ss_dssp TCSEEEEESCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCCCC
T ss_conf 476427741242578889888875354223
No 37
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=56.25 E-value=5.5 Score=17.14 Aligned_cols=32 Identities=16% Similarity=0.061 Sum_probs=20.8
Q ss_pred HHCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 557799998795489999999741287299415
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMN 67 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn 67 (264)
..+|.+++.|++-.. .+.+......+|++.+.
T Consensus 89 ~~~~~~~~~~~~~~~-~~~~~a~~~~ip~~~~~ 120 (351)
T d1f0ka_ 89 YKPDVVLGMGGYVSG-PGGLAAWSLGIPVVLHE 120 (351)
T ss_dssp HCCSEEEECSSTTHH-HHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEECCCCHHH-HHHHHHHHCCCCEEECC
T ss_conf 344300110322113-44545540564346322
No 38
>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=56.07 E-value=5.5 Score=17.12 Aligned_cols=86 Identities=7% Similarity=0.034 Sum_probs=52.8
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCCC----------CCHHHCCEEEE---ECCCHHHHHHHHHHHHCCCEEEEECC----
Q ss_conf 05999955998999999999987078----------88455779999---87954899999997412872994153----
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYGN----------STSEEADVIVV---LGGDGFMLQSFHQSKEYDKPIYGMNC---- 68 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~~----------~~~~~~Dlii~---iGGDGT~L~a~~~~~~~~~PilGIn~---- 68 (264)
.++-++.++......+...|. ..+. .-.+.+|+|+. ..|+|..+-+........+||+.+-.
T Consensus 12 ~~iLvvdd~~~~~~~l~~~L~-~~G~~v~~~~~~~~al~~~~Dlvl~D~~mp~~~~~~~~~~~~~~p~~pvI~lta~~~~ 90 (189)
T d1qo0d_ 12 LQVLVLNPPGEVSDALVLQLI-RIGCSVRQCWPPPEAFDVPVDVVFTSIFQNRHHDEIAALLAAGTPRTTLVALVEYESP 90 (189)
T ss_dssp CEEEEESCTTHHHHHHHHHHH-HHTCEEEEECSCCSSCSSCCSEEEEECCSSTHHHHHHHHHHHSCTTCEEEEEECCCSH
T ss_pred CEEEEEECCHHHHHHHHHHHH-HCCCCCEECCCHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHH
T ss_conf 979999689999999999999-8699623047988955678898988188998499999999972999988999546208
Q ss_pred ---------CCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf ---------433201044587899986642012
Q gi|254780754|r 69 ---------GSVGFLMNEYCIENLVERLSVAVE 92 (264)
Q Consensus 69 ---------G~lGFL~~~~~~~~~~~~l~~~~~ 92 (264)
|-.+||.-++..+.+...+.....
T Consensus 91 ~~~~~al~~Ga~~yL~KP~~~~~L~~~i~~~~~ 123 (189)
T d1qo0d_ 91 AVLSQIIELECHGVITQPLDAHRVLPVLVSARR 123 (189)
T ss_dssp HHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCC
T ss_conf 878999975982999734301688888764032
No 39
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
Probab=55.55 E-value=4 Score=17.99 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=15.3
Q ss_pred HCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 5779999879548999999974128729941534
Q gi|254780754|r 36 EADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCG 69 (264)
Q Consensus 36 ~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~G 69 (264)
.+|+||+ |....-+...+...++|.+....+
T Consensus 106 ~~Dlvi~---D~~~~~~~~~a~~~~~p~v~~~~~ 136 (450)
T d2c1xa1 106 PVSCLVA---DAFIWFAADMAAEMGVAWLPFWTA 136 (450)
T ss_dssp CCCEEEE---ETTSTTHHHHHHHHTCEEEEEECS
T ss_pred CCEEEEE---CCCCHHHHHHHHHHCCCEEEEECC
T ss_conf 9769997---783179999999819977997157
No 40
>d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]}
Probab=55.23 E-value=5.7 Score=17.04 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=23.9
Q ss_pred HHHCCEEEEECCCHHHHHHHHHHH---HCCCEEEEECC
Q ss_conf 455779999879548999999974---12872994153
Q gi|254780754|r 34 SEEADVIVVLGGDGFMLQSFHQSK---EYDKPIYGMNC 68 (264)
Q Consensus 34 ~~~~Dlii~iGGDGT~L~a~~~~~---~~~~PilGIn~ 68 (264)
....|+||.+|| |+++-.+.... ..++|++-|=+
T Consensus 100 ~~r~d~IiaiGG-G~v~D~ak~~A~~y~rgi~~i~vPT 136 (389)
T d1sg6a_ 100 CGRDTVVIALGG-GVIGDLTGFVASTYMRGVRYVQVPT 136 (389)
T ss_dssp CCTTCEEEEEES-HHHHHHHHHHHHHGGGCCEEEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 677756999656-3477889999999855876367314
No 41
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=54.98 E-value=4.2 Score=17.90 Aligned_cols=29 Identities=14% Similarity=0.041 Sum_probs=18.8
Q ss_pred HHCCEEEEECCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf 55779999879548999999974128729941
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGM 66 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGI 66 (264)
...|+++.---..-.+..++.+ ++|...+
T Consensus 110 ~~~d~vi~~~~~~~~~~~a~~~---~~p~~~~ 138 (473)
T d2pq6a1 110 PPVTCLVSDCCMSFTIQAAEEF---ELPNVLY 138 (473)
T ss_dssp CCCCEEEEETTCTHHHHHHHHT---TCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHH---CCCCEEE
T ss_conf 8886999647422669999994---8984320
No 42
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}
Probab=54.89 E-value=5 Score=17.40 Aligned_cols=37 Identities=22% Similarity=0.455 Sum_probs=21.1
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHCCEEEEECCC
Q ss_conf 505999955998999999999987078884557799998795
Q gi|254780754|r 5 IQKIHFKASNAKKAQEAYDKFVKIYGNSTSEEADVIVVLGGD 46 (264)
Q Consensus 5 ~~ki~i~~~~~~~a~~~~~~l~~~~~~~~~~~~Dlii~iGGD 46 (264)
||||+++++-.-.. +..+.+.+.+. .+++|.++.. ||
T Consensus 1 mMki~iiSDiHg~~-~al~~vl~~~~---~~~~D~iv~~-GD 37 (184)
T d1su1a_ 1 MMKLMFASDIHGSL-PATERVLELFA---QSGAQWLVIL-GD 37 (184)
T ss_dssp CCEEEEECCCTTBH-HHHHHHHHHHH---HHTCSEEEEC-SC
T ss_pred CCEEEEEEECCCCH-HHHHHHHHHHH---HCCCCEEEEC-CC
T ss_conf 96899995158998-99999999885---5699899992-76
No 43
>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}
Probab=52.44 E-value=6.3 Score=16.76 Aligned_cols=86 Identities=15% Similarity=0.258 Sum_probs=48.0
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHCCC-----------CCHHHCCEEEE----ECCCHH-HHHHHHHHHHCCCEEEEECC
Q ss_conf 505999955998999999999987078-----------88455779999----879548-99999997412872994153
Q gi|254780754|r 5 IQKIHFKASNAKKAQEAYDKFVKIYGN-----------STSEEADVIVV----LGGDGF-MLQSFHQSKEYDKPIYGMNC 68 (264)
Q Consensus 5 ~~ki~i~~~~~~~a~~~~~~l~~~~~~-----------~~~~~~Dlii~----iGGDGT-~L~a~~~~~~~~~PilGIn~ 68 (264)
|.||.++.++..-.+-+...|.+ .+. ...+.+|+|+. =|.||. +++..+. ....+|++-+-.
T Consensus 2 M~kILiVDDd~~~~~~l~~~L~~-~g~v~~~~~~~~al~~~~~~dlillD~~mP~~~G~~~~~~lr~-~~~~~~ii~it~ 79 (120)
T d1p2fa2 2 MWKIAVVDDDKNILKKVSEKLQQ-LGRVKTFLTGEDFLNDEEAFHVVVLDVMLPDYSGYEICRMIKE-TRPETWVILLTL 79 (120)
T ss_dssp CEEEEEECSCHHHHHHHHHHHTT-TEEEEEESSHHHHHHCCSCCSEEEEESBCSSSBHHHHHHHHHH-HCTTSEEEEEES
T ss_pred CCEEEEEECCHHHHHHHHHHHHH-CCEEEEECCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHH-CCCCCCEEEEEC
T ss_conf 98899997999999999999996-9979998899999851789999999674400200478999861-389986899806
Q ss_pred -------------CCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf -------------433201044587899986642012
Q gi|254780754|r 69 -------------GSVGFLMNEYCIENLVERLSVAVE 92 (264)
Q Consensus 69 -------------G~lGFL~~~~~~~~~~~~l~~~~~ 92 (264)
|--+||+-+++++++...+.+...
T Consensus 80 ~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~ 116 (120)
T d1p2fa2 80 LSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLE 116 (120)
T ss_dssp CCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 7999999999987998999799999999999999998
No 44
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=52.41 E-value=6.3 Score=16.75 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=54.3
Q ss_pred EEEEEEECCCHHHHHHHHHHHHH-CCC---CC---------HHHCCEEEEE----CCCHH-HHHHHHHHH-HCCCEEEEE
Q ss_conf 05999955998999999999987-078---88---------4557799998----79548-999999974-128729941
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKI-YGN---ST---------SEEADVIVVL----GGDGF-MLQSFHQSK-EYDKPIYGM 66 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~-~~~---~~---------~~~~Dlii~i----GGDGT-~L~a~~~~~-~~~~PilGI 66 (264)
.||-++.++....+.+...|... |.. .. ...+|+|+.= |.||. +++..+... ...+||+-+
T Consensus 2 arILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~dlil~D~~~p~~~G~~~~~~ir~~~~~~~~piI~l 81 (139)
T d1w25a1 2 ARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLI 81 (139)
T ss_dssp CEEEEECSSTTHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 88999989899999999999987999999746325455431354102211012468984288877664132468988999
Q ss_pred CC-------------CCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 53-------------4332010445878999866420124
Q gi|254780754|r 67 NC-------------GSVGFLMNEYCIENLVERLSVAVEC 93 (264)
Q Consensus 67 n~-------------G~lGFL~~~~~~~~~~~~l~~~~~~ 93 (264)
.. |--+||.-++..+.+...+......
T Consensus 82 t~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lr~ 121 (139)
T d1w25a1 82 TALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRF 121 (139)
T ss_dssp ECSSCHHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 7079999999999869988888999999999999999999
No 45
>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}
Probab=51.40 E-value=5.9 Score=16.97 Aligned_cols=60 Identities=15% Similarity=0.138 Sum_probs=32.4
Q ss_pred CEEEEEEECCC----HHHHHHHHHHHHHCCCCCHHHCCEEEEECC-C-HHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 50599995599----899999999998707888455779999879-5-48999999974128729941534
Q gi|254780754|r 5 IQKIHFKASNA----KKAQEAYDKFVKIYGNSTSEEADVIVVLGG-D-GFMLQSFHQSKEYDKPIYGMNCG 69 (264)
Q Consensus 5 ~~ki~i~~~~~----~~a~~~~~~l~~~~~~~~~~~~Dlii~iGG-D-GT~L~a~~~~~~~~~PilGIn~G 69 (264)
||++.++.+.. +.-.+.++++-+.+.+ -..-++.|| . |-|=.+++-+...+..+.||...
T Consensus 1 mk~v~VF~~s~~~~~~~~~~~a~~lg~~la~-----~g~~lv~GGG~~GlMga~a~ga~~~gg~v~gv~~~ 66 (179)
T d1t35a_ 1 MKTICVFAGSNPGGNEAYKRKAAELGVYMAE-----QGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPS 66 (179)
T ss_dssp CCEEEEECCSSCCSSTHHHHHHHHHHHHHHH-----TTCEEEECCCCSHHHHHHHHHHHTTTCCEEEEEET
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHHHH-----CCCEEEECCCCHHHHHHHHCCHHHCCCCEECCCCC
T ss_conf 9779998657999597999999999999998-----79929988971579999850456429821100010
No 46
>d1fyea_ c.23.16.4 (A:) Aspartyl dipeptidase PepE {Salmonella typhimurium [TaxId: 90371]}
Probab=51.02 E-value=6.7 Score=16.62 Aligned_cols=37 Identities=27% Similarity=0.454 Sum_probs=24.6
Q ss_pred HHHCCEEEEECCCHHHHH----------HHHHHHHCCCEEEEECCCC
Q ss_conf 455779999879548999----------9999741287299415343
Q gi|254780754|r 34 SEEADVIVVLGGDGFMLQ----------SFHQSKEYDKPIYGMNCGS 70 (264)
Q Consensus 34 ~~~~Dlii~iGGDGT~L~----------a~~~~~~~~~PilGIn~G~ 70 (264)
.+++|+|++-|||=+.|. +++.....+.++.|...|.
T Consensus 77 l~~ad~I~v~GGn~~~l~~~l~~t~l~~~l~~~~~~G~vi~G~SAGA 123 (229)
T d1fyea_ 77 IEKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGA 123 (229)
T ss_dssp HHHCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHH
T ss_pred HHHCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECHHH
T ss_conf 86499999968889999999970887999999997698399957167
No 47
>d2ab0a1 c.23.16.2 (A:2-196) Protein ThiJ (YajL) {Escherichia coli [TaxId: 562]}
Probab=50.89 E-value=6.7 Score=16.60 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=28.3
Q ss_pred HHHCCEEEEECCCH---------HHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 45577999987954---------89999999741287299415343
Q gi|254780754|r 34 SEEADVIVVLGGDG---------FMLQSFHQSKEYDKPIYGMNCGS 70 (264)
Q Consensus 34 ~~~~Dlii~iGGDG---------T~L~a~~~~~~~~~PilGIn~G~ 70 (264)
.+++|.+++-||-+ .+++.++.+...++|+.+|-.|-
T Consensus 63 ~~d~D~liiPGG~~~~~~l~~~~~l~~~lr~~~~~gk~i~aiC~g~ 108 (195)
T d2ab0a1 63 DGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAP 108 (195)
T ss_dssp TSCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHH
T ss_pred CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 0222499975655752112221999999998764033156310241
No 48
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=48.83 E-value=7.2 Score=16.40 Aligned_cols=83 Identities=17% Similarity=0.277 Sum_probs=46.1
Q ss_pred EEEEEEECCCHHHHHHHHHHHHH-CCC---C---------CHHHCCEEEE----ECCCHH-HHHHHHHHHHCCCEEEEEC
Q ss_conf 05999955998999999999987-078---8---------8455779999----879548-9999999741287299415
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKI-YGN---S---------TSEEADVIVV----LGGDGF-MLQSFHQSKEYDKPIYGMN 67 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~-~~~---~---------~~~~~Dlii~----iGGDGT-~L~a~~~~~~~~~PilGIn 67 (264)
|||-++.++...+..+...|.+. |.. . ....+|+++. =|.||. +++..+. ..++|++-+-
T Consensus 1 KrILiVdDd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~dlillD~~mp~~~G~~~~~~i~~--~~~~pvI~lt 78 (117)
T d2a9pa1 1 KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRK--TSSVPILMLS 78 (117)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHT--TCCCCEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHH--CCCCCEEEEE
T ss_conf 98999979999999999999987999999878799999998369878985045579996289999986--7999889996
Q ss_pred C-------------CCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 3-------------4332010445878999866420
Q gi|254780754|r 68 C-------------GSVGFLMNEYCIENLVERLSVA 90 (264)
Q Consensus 68 ~-------------G~lGFL~~~~~~~~~~~~l~~~ 90 (264)
. |--+||.-+++.+++...+...
T Consensus 79 ~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~ 114 (117)
T d2a9pa1 79 AKDSEFDKVIGLELGADDYVTKPFSNRELQARVKAL 114 (117)
T ss_dssp SCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 689999999999869989998989999999999998
No 49
>d1eiwa_ c.23.3.1 (A:) Hypothetical protein MTH538 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=47.02 E-value=7.7 Score=16.22 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=40.4
Q ss_pred EEC-CCHHHHHHHHHHHH---HCCCCCHHHCCEEEEECCCHH-----HHHHHHHHHHCCCEEEEECC
Q ss_conf 955-99899999999998---707888455779999879548-----99999997412872994153
Q gi|254780754|r 11 KAS-NAKKAQEAYDKFVK---IYGNSTSEEADVIVVLGGDGF-----MLQSFHQSKEYDKPIYGMNC 68 (264)
Q Consensus 11 ~~~-~~~~a~~~~~~l~~---~~~~~~~~~~Dlii~iGGDGT-----~L~a~~~~~~~~~PilGIn~ 68 (264)
+.+ +..+=.+..+++.+ .+-....++.|++|++.|=-| +-.-...+...++||+||..
T Consensus 9 ~~~~~~~d~~~~~er~e~~~~~Wid~~~~~~~vvIVL~G~yt~~r~WI~~EI~~A~~~~KpIIgV~p 75 (111)
T d1eiwa_ 9 ITEGEVEDYRVFLERLEQSGLEWRPATPEDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRP 75 (111)
T ss_dssp ECCCCSHHHHHHHHHHHHHCSCEEECCSSSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECC
T ss_pred EECCCHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 9368503599999999875222110132579789999404435778999999999985997699981
No 50
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=46.09 E-value=8 Score=16.13 Aligned_cols=83 Identities=19% Similarity=0.299 Sum_probs=46.2
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCC-----C---------CHHHCCEEEE----ECCCHH-HHHHHHHHHHCCCEEEEEC
Q ss_conf 5999955998999999999987078-----8---------8455779999----879548-9999999741287299415
Q gi|254780754|r 7 KIHFKASNAKKAQEAYDKFVKIYGN-----S---------TSEEADVIVV----LGGDGF-MLQSFHQSKEYDKPIYGMN 67 (264)
Q Consensus 7 ki~i~~~~~~~a~~~~~~l~~~~~~-----~---------~~~~~Dlii~----iGGDGT-~L~a~~~~~~~~~PilGIn 67 (264)
+|.++. +.+...+..+.+.+..+- . ....+|++++ =|.||. +++.++.. ..++|++-+.
T Consensus 5 ~ILIVD-Dd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~l~~~~~dlii~D~~mp~~~G~el~~~l~~~-~~~~piI~~t 82 (123)
T d1krwa_ 5 IVWVVD-DDSSIRWVLERALAGAGLTCTTFENGNEVLAALASKTPDVLLSDIRMPGMDGLALLKQIKQR-HPMLPVIIMT 82 (123)
T ss_dssp EEEEES-SSHHHHHHHHHHHHHTTCEEEEESSSHHHHHHHTTCCCSEEEECCSSSSSTTHHHHHHHHHH-SSSCCEEESC
T ss_pred EEEEEE-CCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEHHHCCCCHHHHHHHHHHHH-CCCCEEEEEE
T ss_conf 899998-99999999999999779989995888999999982788799865423785279999999985-7998099996
Q ss_pred C-------------CCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 3-------------43320104458789998664201
Q gi|254780754|r 68 C-------------GSVGFLMNEYCIENLVERLSVAV 91 (264)
Q Consensus 68 ~-------------G~lGFL~~~~~~~~~~~~l~~~~ 91 (264)
. |-.+||.-++..+++...+.++.
T Consensus 83 ~~~~~~~~~~a~~~Ga~dyl~KP~~~~eL~~~i~~~l 119 (123)
T d1krwa_ 83 AHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAI 119 (123)
T ss_dssp CCSCHHHHHHHHHHTEEEECSSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 6899999999998699748849699999999999999
No 51
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.20 E-value=8.5 Score=15.95 Aligned_cols=84 Identities=21% Similarity=0.306 Sum_probs=49.2
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCCCC--------------------HHHCCEEEE----ECCCH-HHHHHHHHHHHCCC
Q ss_conf 599995599899999999998707888--------------------455779999----87954-89999999741287
Q gi|254780754|r 7 KIHFKASNAKKAQEAYDKFVKIYGNST--------------------SEEADVIVV----LGGDG-FMLQSFHQSKEYDK 61 (264)
Q Consensus 7 ki~i~~~~~~~a~~~~~~l~~~~~~~~--------------------~~~~Dlii~----iGGDG-T~L~a~~~~~~~~~ 61 (264)
|+- +.++++...++...+.+..+... .+.+|+|+. =|.|| .+++..|.-....+
T Consensus 3 rVL-vVDD~~~~~~~l~~~L~~~g~~~v~~a~~g~eAl~~l~~~~~~~~~~dlillD~~mP~~dG~el~~~ir~~~~~~~ 81 (128)
T d2r25b1 3 KIL-VVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTS 81 (128)
T ss_dssp CEE-EECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCCCS
T ss_pred EEE-EEECCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCC
T ss_conf 999-9969899999999999986995999976839999999864402577887999707999888999999997068998
Q ss_pred EEEEECC-------------CCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 2994153-------------43320104458789998664201
Q gi|254780754|r 62 PIYGMNC-------------GSVGFLMNEYCIENLVERLSVAV 91 (264)
Q Consensus 62 PilGIn~-------------G~lGFL~~~~~~~~~~~~l~~~~ 91 (264)
||+-+.. |--|||+-+++.+++.+.+.+..
T Consensus 82 piI~lT~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~ 124 (128)
T d2r25b1 82 PIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFC 124 (128)
T ss_dssp CEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHC
T ss_pred EEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 0999977799999999998699899989899999999999999
No 52
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]}
Probab=44.14 E-value=6.9 Score=16.51 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=16.6
Q ss_pred HCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 57799998795489999999741287299415
Q gi|254780754|r 36 EADVIVVLGGDGFMLQSFHQSKEYDKPIYGMN 67 (264)
Q Consensus 36 ~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn 67 (264)
++..|+++---|..-+-+.++.. ..||+.+-
T Consensus 35 ~akaIvv~T~sG~tar~iSk~RP-~~pI~a~t 65 (141)
T d1pkla3 35 KAKAMVVLSNTGRSARLVAKYRP-NCPIVCVT 65 (141)
T ss_dssp TCSCEEEECSSSHHHHHHHHTCC-SSCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHCC-CCCEEEEC
T ss_conf 99999998798679999996367-88723434
No 53
>d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]}
Probab=42.61 E-value=9 Score=15.80 Aligned_cols=66 Identities=11% Similarity=-0.017 Sum_probs=42.8
Q ss_pred CCEEEEEEECCCH---HHHHHHHHHHHHC---------------------------CCCCHHHCCEEEEECCCHH-----
Q ss_conf 6505999955998---9999999999870---------------------------7888455779999879548-----
Q gi|254780754|r 4 NIQKIHFKASNAK---KAQEAYDKFVKIY---------------------------GNSTSEEADVIVVLGGDGF----- 48 (264)
Q Consensus 4 ~~~ki~i~~~~~~---~a~~~~~~l~~~~---------------------------~~~~~~~~Dlii~iGGDGT----- 48 (264)
+.+|+++...+.- +.....+.|...- ......++|.+++-||.+.
T Consensus 2 ~grkVaiLv~dg~~~~e~~~~~~~l~~ag~~v~~v~~~~~~v~~~~G~~i~~d~t~~~~~~~~yDaliiPGG~~~~l~~~ 81 (156)
T d1p80a1 2 KGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIADIADN 81 (156)
T ss_dssp TTCEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSSEEECTTSCEEECCEETTTSCGGGCSEEEECCSCTHHHHTC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCHHHHHCC
T ss_conf 97689999679988899999999999789989997524454443220378654550457722177899608756777541
Q ss_pred --HHHHHHHHHHCCCEEEEECCC
Q ss_conf --999999974128729941534
Q gi|254780754|r 49 --MLQSFHQSKEYDKPIYGMNCG 69 (264)
Q Consensus 49 --~L~a~~~~~~~~~PilGIn~G 69 (264)
.++.++.+....+||-.|-.|
T Consensus 82 ~~~~~~i~e~~~~~K~I~aic~g 104 (156)
T d1p80a1 82 GDANYYLMEAYKHLKPIALAGDA 104 (156)
T ss_dssp HHHHHHHHHHHHTTCCEEEEGGG
T ss_pred HHHHHHHHHHHHCCCEEEEECCH
T ss_conf 58999999999869969998806
No 54
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}
Probab=42.01 E-value=9.2 Score=15.74 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=33.4
Q ss_pred EEEEEEECCCH--HH-HHHHHHHHHHCCCCCHHHCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 05999955998--99-9999999987078884557799998795489999999741287299415
Q gi|254780754|r 6 QKIHFKASNAK--KA-QEAYDKFVKIYGNSTSEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMN 67 (264)
Q Consensus 6 ~ki~i~~~~~~--~a-~~~~~~l~~~~~~~~~~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn 67 (264)
|||+++++-.- .+ +++.+.+.+ +++|.++..| |=.--...........|++++.
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~-------~~~D~ii~~G-D~~~~~~~~~l~~~~~~~~~v~ 57 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFND-------ENVETVIHCG-DFVSLFVIKEFENLNANIIATY 57 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHH-------SCCSEEEECS-CCCSTHHHHHGGGCSSEEEEEC
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHH-------CCCCEEEECC-CCCCHHHHHHHHHCCCCEEEEC
T ss_conf 9799998579997999999999986-------6998999999-7557888999863476089971
No 55
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=40.04 E-value=9.8 Score=15.55 Aligned_cols=83 Identities=16% Similarity=0.299 Sum_probs=47.6
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCC-----CC---------HHHCCEEEE----ECCCHH-HHHHHHHHHHCCCEEEEEC
Q ss_conf 5999955998999999999987078-----88---------455779999----879548-9999999741287299415
Q gi|254780754|r 7 KIHFKASNAKKAQEAYDKFVKIYGN-----ST---------SEEADVIVV----LGGDGF-MLQSFHQSKEYDKPIYGMN 67 (264)
Q Consensus 7 ki~i~~~~~~~a~~~~~~l~~~~~~-----~~---------~~~~Dlii~----iGGDGT-~L~a~~~~~~~~~PilGIn 67 (264)
||.++.++..-.+.+.+.|.. .+- .+ ...+|++++ =|.||. +++..+. ...++||+-+-
T Consensus 3 kILiVDD~~~~~~~l~~~L~~-~g~~v~~a~~~~eal~~~~~~~~dlvl~D~~mP~~~G~el~~~ir~-~~~~~piI~lt 80 (121)
T d1ys7a2 3 RVLVVDDDSDVLASLERGLRL-SGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRA-MDNDVPVCVLS 80 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHH-TTCEEEEESSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHH-TTCCCCEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHH-CCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH-CCCCCEEEEEE
T ss_conf 899998999999999999998-7999999878899999998279878997760367520789999996-49998799998
Q ss_pred C-------------CCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 3-------------43320104458789998664201
Q gi|254780754|r 68 C-------------GSVGFLMNEYCIENLVERLSVAV 91 (264)
Q Consensus 68 ~-------------G~lGFL~~~~~~~~~~~~l~~~~ 91 (264)
. |--+||+-+++.+++...+....
T Consensus 81 ~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l 117 (121)
T d1ys7a2 81 ARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALL 117 (121)
T ss_dssp CCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 2189999999998799899989899999999999999
No 56
>d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]}
Probab=39.94 E-value=6.8 Score=16.56 Aligned_cols=42 Identities=12% Similarity=0.143 Sum_probs=18.4
Q ss_pred HHHHHHHHHHH--CCCEEE-EECCCCC-CCCCCCCCHHHHHHHHHHCC
Q ss_conf 89999999741--287299-4153433-20104458789998664201
Q gi|254780754|r 48 FMLQSFHQSKE--YDKPIY-GMNCGSV-GFLMNEYCIENLVERLSVAV 91 (264)
Q Consensus 48 T~L~a~~~~~~--~~~Pil-GIn~G~l-GFL~~~~~~~~~~~~l~~~~ 91 (264)
.+...++.... .++|++ .+.+-.= |.. +.+.++..+.+..+.
T Consensus 60 ~l~~~~~~lr~~~~~~PiI~T~R~~~eGG~~--~~~~~~~~~ll~~~~ 105 (252)
T d1gqna_ 60 SVLTAARVIRDAMPDIPLLFTFRSAKEGGEQ--TITTQHYLTLNRAAI 105 (252)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECCBGGGTCSB--CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECHHHCCCC--CCCHHHHHHHHHHHH
T ss_conf 9999999999735799789998353217878--899999999999999
No 57
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]}
Probab=39.74 E-value=10 Score=15.52 Aligned_cols=12 Identities=33% Similarity=0.888 Sum_probs=8.9
Q ss_pred EEEEECCCHHHH
Q ss_conf 999987954899
Q gi|254780754|r 39 VIVVLGGDGFML 50 (264)
Q Consensus 39 lii~iGGDGT~L 50 (264)
-|+++||||++.
T Consensus 171 ~V~~~gGDG~~~ 182 (447)
T d2c42a2 171 SVWIFGGDGWAY 182 (447)
T ss_dssp EEEEEEEHHHHH
T ss_pred CEEEEECCCCHH
T ss_conf 279995475075
No 58
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=38.63 E-value=10 Score=15.41 Aligned_cols=21 Identities=10% Similarity=0.327 Sum_probs=10.6
Q ss_pred EEEEEEECCCHHHHHHHHHHHH
Q ss_conf 0599995599899999999998
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVK 27 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~ 27 (264)
.|+.++ ++++...+..+.+..
T Consensus 2 irILiv-DD~~~~~~~l~~~L~ 22 (123)
T d1dz3a_ 2 IKVCIA-DDNRELVSLLDEYIS 22 (123)
T ss_dssp EEEEEE-CSCHHHHHHHHHHHH
T ss_pred CEEEEE-ECCHHHHHHHHHHHH
T ss_conf 599999-689999999999998
No 59
>d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain {Neurospora crassa [TaxId: 5141]}
Probab=37.88 E-value=11 Score=15.34 Aligned_cols=39 Identities=21% Similarity=0.096 Sum_probs=29.3
Q ss_pred CHHHCCEEEEECCCH---------HHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 845577999987954---------899999997412872994153433
Q gi|254780754|r 33 TSEEADVIVVLGGDG---------FMLQSFHQSKEYDKPIYGMNCGSV 71 (264)
Q Consensus 33 ~~~~~Dlii~iGGDG---------T~L~a~~~~~~~~~PilGIn~G~l 71 (264)
...+.|.+++.||-+ .++..++.+....+|+.+|-.|..
T Consensus 61 ~~~~~dalivpgg~~~~~~~~~~~~~~~~l~~~~~~~k~i~aic~G~~ 108 (184)
T d1sy7a1 61 RSTMVDAIFIPGGAKAAETLSKNGRALHWIREAFGHLKAIGATGEAVD 108 (184)
T ss_dssp CGGGSSEEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHH
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHH
T ss_conf 455640799961135321112221004899999851893687441899
No 60
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=37.04 E-value=11 Score=15.25 Aligned_cols=34 Identities=15% Similarity=0.016 Sum_probs=22.0
Q ss_pred HHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 5577999987954899999997412872994153
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNC 68 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~ 68 (264)
+.+|++|+.+..-..+-+...+....+|......
T Consensus 91 ~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~ 124 (391)
T d1pn3a_ 91 EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVL 124 (391)
T ss_dssp TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEC
T ss_conf 0798478734471378999999980876488531
No 61
>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]}
Probab=35.92 E-value=8.7 Score=15.88 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=22.8
Q ss_pred HCCEEEEECCCHH-----HHHHHHHHHHCCCEEEEECCCC
Q ss_conf 5779999879548-----9999999741287299415343
Q gi|254780754|r 36 EADVIVVLGGDGF-----MLQSFHQSKEYDKPIYGMNCGS 70 (264)
Q Consensus 36 ~~Dlii~iGGDGT-----~L~a~~~~~~~~~PilGIn~G~ 70 (264)
++|.++.-||-|. .....+.....++|+|||=.|+
T Consensus 47 ~~~~iils~Gpg~~~~~~~~~~i~~~l~~~iPiLGIClG~ 86 (192)
T d1i7qb_ 47 EQPVLMLSPGPGTPSEAGCMPELLQRLRGQLPIIGICLGH 86 (192)
T ss_dssp SSEEEEECCCSSCGGGSTTHHHHHHHHBTTBCEEEETHHH
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHH
T ss_conf 9986872575522222223145677663476487521888
No 62
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}
Probab=35.40 E-value=8.1 Score=16.07 Aligned_cols=13 Identities=46% Similarity=0.693 Sum_probs=5.4
Q ss_pred EEEEECCCHHHHH
Q ss_conf 9999879548999
Q gi|254780754|r 39 VIVVLGGDGFMLQ 51 (264)
Q Consensus 39 lii~iGGDGT~L~ 51 (264)
-++++.|||+|+.
T Consensus 74 ~vi~i~GDG~f~~ 86 (192)
T d1ozha3 74 KVVSVSGDGGFLQ 86 (192)
T ss_dssp EEEEEEEHHHHHH
T ss_pred CCEEECCCCCCCC
T ss_conf 2023304643000
No 63
>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=34.14 E-value=12 Score=14.96 Aligned_cols=63 Identities=13% Similarity=0.148 Sum_probs=32.8
Q ss_pred CCCEEEEEEECCC----HHHHHHHHHHHHHCCCCCHHHCCEEEEE-CCCHHHHHHHHHH-HHCCCEEEEECCCC
Q ss_conf 7650599995599----8999999999987078884557799998-7954899999997-41287299415343
Q gi|254780754|r 3 RNIQKIHFKASNA----KKAQEAYDKFVKIYGNSTSEEADVIVVL-GGDGFMLQSFHQS-KEYDKPIYGMNCGS 70 (264)
Q Consensus 3 ~~~~ki~i~~~~~----~~a~~~~~~l~~~~~~~~~~~~Dlii~i-GGDGT~L~a~~~~-~~~~~PilGIn~G~ 70 (264)
.+|||+.++.+.. +.-.+.++++-+.+.+. .+-++. ||.+-+..|+... ...+-.+.||....
T Consensus 4 ~~~k~v~Vf~gs~~~~~~~~~~~a~~lg~~la~~-----g~~lV~GGG~~GlMga~a~ga~~~gg~v~Gi~~~~ 72 (183)
T d2q4oa1 4 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSR-----NIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKT 72 (183)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHT-----TCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEETT
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC-----CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 6776189987579995978999999999999986-----99599899985348999999986699620011132
No 64
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]}
Probab=33.14 E-value=13 Score=14.86 Aligned_cols=40 Identities=23% Similarity=0.269 Sum_probs=31.8
Q ss_pred CCHHHCCEEEEECCCHH-------------------HHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 88455779999879548-------------------99999997412872994153433
Q gi|254780754|r 32 STSEEADVIVVLGGDGF-------------------MLQSFHQSKEYDKPIYGMNCGSV 71 (264)
Q Consensus 32 ~~~~~~Dlii~iGGDGT-------------------~L~a~~~~~~~~~PilGIn~G~l 71 (264)
...++.|.++.-||=|. +++.++.+...++|+-.|=.|-.
T Consensus 81 v~~~~yDaliiPGG~g~~~~l~~~~~~~~~~~~~~~v~~li~~~~~~gk~iaaIC~gp~ 139 (217)
T d1vhqa_ 81 ADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPA 139 (217)
T ss_dssp CCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGG
T ss_pred CCHHHCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHH
T ss_conf 89847878996698663777765210242122289999999999986997999886089
No 65
>d1p5fa_ c.23.16.2 (A:) DJ-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.10 E-value=13 Score=14.86 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=28.0
Q ss_pred HCCEEEEECCCHH---------HHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 5779999879548---------99999997412872994153433
Q gi|254780754|r 36 EADVIVVLGGDGF---------MLQSFHQSKEYDKPIYGMNCGSV 71 (264)
Q Consensus 36 ~~Dlii~iGGDGT---------~L~a~~~~~~~~~PilGIn~G~l 71 (264)
++|.+++.||.+. ++..++.+...++|+.+|-.|..
T Consensus 64 ~~D~liipGG~~~~~~l~~~~~l~~~lr~~~~~~k~i~aiC~G~~ 108 (186)
T d1p5fa_ 64 PYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPT 108 (186)
T ss_dssp CCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHH
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCC
T ss_conf 646899816755301001249999999875304651330556732
No 66
>d2f62a1 c.23.14.1 (A:9-160) Nucleoside 2-deoxyribosyltransferase {Trypanosoma brucei [TaxId: 5691]}
Probab=31.88 E-value=13 Score=14.73 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=25.4
Q ss_pred HHCCEEEEE-----C---CCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 557799998-----7---9548999999974128729941534
Q gi|254780754|r 35 EEADVIVVL-----G---GDGFMLQSFHQSKEYDKPIYGMNCG 69 (264)
Q Consensus 35 ~~~Dlii~i-----G---GDGT~L~a~~~~~~~~~PilGIn~G 69 (264)
.++|++|++ | .+||.-..-. +...++||++....
T Consensus 58 ~~~D~VIA~Ld~frg~~~D~GTa~EiG~-A~algKPVi~~~~d 99 (152)
T d2f62a1 58 KDCDAVIADLSPFRGHEPDCGTAFEVGC-AAALNKMVLTFTSD 99 (152)
T ss_dssp HHCSEEEEECCCCSSSSCCHHHHHHHHH-HHHTTCEEEEECSC
T ss_pred HHCCEEEEECCCCCCCCCCCHHHHHHHH-HHHCCCEEEEEECC
T ss_conf 8699999982466799998419999999-99879859999657
No 67
>d1k68a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpA [TaxId: 1188]}
Probab=31.87 E-value=13 Score=14.73 Aligned_cols=57 Identities=14% Similarity=0.206 Sum_probs=36.0
Q ss_pred HCCEEEE----ECCCHH-HHHHHHHHHH-CCCEEEEECC-------------CCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 5779999----879548-9999999741-2872994153-------------433201044587899986642012
Q gi|254780754|r 36 EADVIVV----LGGDGF-MLQSFHQSKE-YDKPIYGMNC-------------GSVGFLMNEYCIENLVERLSVAVE 92 (264)
Q Consensus 36 ~~Dlii~----iGGDGT-~L~a~~~~~~-~~~PilGIn~-------------G~lGFL~~~~~~~~~~~~l~~~~~ 92 (264)
.+|+|+. =|.||. +++..|.... ..+||+-+.. |--+||+-++..+++.+.+..+..
T Consensus 55 ~pdlillD~~mP~~dG~el~~~ir~~~~~~~iPvI~ls~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~i~~ 130 (140)
T d1k68a_ 55 RPDLILLDLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 9978988622433447699999885846589968999578999999999987998999798999999999999999
No 68
>d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]}
Probab=31.65 E-value=13 Score=14.77 Aligned_cols=15 Identities=0% Similarity=0.118 Sum_probs=7.1
Q ss_pred HCCCCCCCEEEEEEC
Q ss_conf 002788414899974
Q gi|254780754|r 197 GAILPNDVMIEIQVL 211 (264)
Q Consensus 197 plVl~~~~~I~i~i~ 211 (264)
|+..+.+..+++++.
T Consensus 97 ~~~~~~~~~l~Lri~ 111 (164)
T d1y4wa1 97 PLTPDSTGVVKLSIF 111 (164)
T ss_dssp ECCCCTTSEEEEEEE
T ss_pred ECCCCCCCEEEEEEE
T ss_conf 102578980899999
No 69
>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]}
Probab=30.18 E-value=14 Score=14.55 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=29.0
Q ss_pred CCEEEEECCC----------HHHHHHHHHHHHCCCEEEEEC--CCCCCCCC
Q ss_conf 7799998795----------489999999741287299415--34332010
Q gi|254780754|r 37 ADVIVVLGGD----------GFMLQSFHQSKEYDKPIYGMN--CGSVGFLM 75 (264)
Q Consensus 37 ~Dlii~iGGD----------GT~L~a~~~~~~~~~PilGIn--~G~lGFL~ 75 (264)
+=+|...||. |..+.....+...++-++.|| +|-+|||.
T Consensus 123 PV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~ 173 (544)
T d1thga_ 123 PVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLG 173 (544)
T ss_dssp EEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCC
T ss_pred CEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC
T ss_conf 879995268876577766786201235665169859993256513665668
No 70
>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.53 E-value=14 Score=14.50 Aligned_cols=60 Identities=13% Similarity=0.066 Sum_probs=32.4
Q ss_pred EEEEEEECCCH--HHHHHHHHHHHHCCCCCHHHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 05999955998--999999999987078884557799998795489999999741287299415343
Q gi|254780754|r 6 QKIHFKASNAK--KAQEAYDKFVKIYGNSTSEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGS 70 (264)
Q Consensus 6 ~ki~i~~~~~~--~a~~~~~~l~~~~~~~~~~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~G~ 70 (264)
|||.++++-.- .+.++...+.+.+. .+++|.|+..|-=+. -.++..+.....|+++| .|+
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~---~~~~D~Ii~~GDi~~-~e~l~~l~~~~~~v~~V-~GN 62 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLV---PGKIQHILCTGNLCT-KESYDYLKTLAGDVHIV-RGD 62 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCC---TTSCSEEEECSCCBS-HHHHHHHHHHCSEEEEC-CCT
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHC---CCCCCEEEECCCCCC-HHHHHHHHHHCCCEEEE-ECC
T ss_conf 989999125889750146899999845---358988999257653-45689887528965999-378
No 71
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=28.48 E-value=15 Score=14.37 Aligned_cols=84 Identities=13% Similarity=0.336 Sum_probs=47.0
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCCCC-----CH---------HHCCEEEEE----CCCHH-HHHHHHHHHHCCCEEEEE
Q ss_conf 059999559989999999999870788-----84---------557799998----79548-999999974128729941
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYGNS-----TS---------EEADVIVVL----GGDGF-MLQSFHQSKEYDKPIYGM 66 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~~~-----~~---------~~~Dlii~i----GGDGT-~L~a~~~~~~~~~PilGI 66 (264)
+||.++. +.+...+......+..+.. .. +.+|++++= ++||. +++.++.. ...+|++-+
T Consensus 1 mrILvVD-Dd~~~~~~l~~~L~~~G~~v~~a~~g~eal~~l~~~~~dliilD~~mP~~~G~e~~~~i~~~-~~~~pvi~l 78 (119)
T d2pl1a1 1 MRVLVVE-DNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSN-DVSLPILVL 78 (119)
T ss_dssp CEEEEEC-SCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHT-TCCSCEEEE
T ss_pred CEEEEEE-CCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHC-CCCCCEEEE
T ss_conf 9899996-89999999999999879999997887999999983464555342039995058899999862-966545765
Q ss_pred CC-------------CCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 53-------------43320104458789998664201
Q gi|254780754|r 67 NC-------------GSVGFLMNEYCIENLVERLSVAV 91 (264)
Q Consensus 67 n~-------------G~lGFL~~~~~~~~~~~~l~~~~ 91 (264)
-. |--+||+-++..+++...+..+.
T Consensus 79 t~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~l 116 (119)
T d2pl1a1 79 TARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALM 116 (119)
T ss_dssp ESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 41699999999998699899979899999999999998
No 72
>d1s2da_ c.23.14.1 (A:) Purine transdeoxyribosylase {Lactobacillus helveticus [TaxId: 1587]}
Probab=28.37 E-value=15 Score=14.35 Aligned_cols=37 Identities=16% Similarity=0.089 Sum_probs=26.6
Q ss_pred HHCCEEEE-ECCC----HHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 55779999-8795----48999999974128729941534332
Q gi|254780754|r 35 EEADVIVV-LGGD----GFMLQSFHQSKEYDKPIYGMNCGSVG 72 (264)
Q Consensus 35 ~~~Dlii~-iGGD----GT~L~a~~~~~~~~~PilGIn~G~lG 72 (264)
+++|++|+ +.|+ ||.-..-.. ...++|+++++.....
T Consensus 80 ~~sD~vIA~ldg~~~D~GTa~EiG~A-~a~gKPvi~~~~d~r~ 121 (167)
T d1s2da_ 80 SNATCGVFLYDMDQLDDGSAFEIGFM-RAMHKPVILVPFTEHP 121 (167)
T ss_dssp HHCSEEEEEEESSSCCHHHHHHHHHH-HHTTCCEEEEEECSCT
T ss_pred HHCCEEEEEECCCCCCCCHHHHHHHH-HHCCCEEEEEECCCCC
T ss_conf 87899999958998996689999999-9879839999667765
No 73
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.00 E-value=15 Score=14.31 Aligned_cols=46 Identities=9% Similarity=0.136 Sum_probs=35.8
Q ss_pred CCCCCHHHCCEEEEECCCHHHH---------HHHHHHHHCCCEEEEECCCCCCCC
Q ss_conf 0788845577999987954899---------999997412872994153433201
Q gi|254780754|r 29 YGNSTSEEADVIVVLGGDGFML---------QSFHQSKEYDKPIYGMNCGSVGFL 74 (264)
Q Consensus 29 ~~~~~~~~~Dlii~iGGDGT~L---------~a~~~~~~~~~PilGIn~G~lGFL 74 (264)
..+.+.+++|.|+..||=|++. +.++.+...++||-.|-.|-.+++
T Consensus 90 ~~~v~~~~ydav~ipGG~g~~~dl~~~~~l~~li~~~~~~gk~vaAIChGp~~L~ 144 (236)
T d1qvwa_ 90 PKEVNADDYQIFMASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAMFD 144 (236)
T ss_dssp GGGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred HHHCCHHHCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH
T ss_conf 6568985798999807764400005666789999999866985898213579998
No 74
>d1k66a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpB [TaxId: 1188]}
Probab=27.77 E-value=12 Score=14.92 Aligned_cols=92 Identities=17% Similarity=0.292 Sum_probs=54.0
Q ss_pred CCCCEEEEEEECCCHHHHHHHHHHHHHCCC--C-----C-------------------HHHCCEEEE----ECCCHH-HH
Q ss_conf 876505999955998999999999987078--8-----8-------------------455779999----879548-99
Q gi|254780754|r 2 DRNIQKIHFKASNAKKAQEAYDKFVKIYGN--S-----T-------------------SEEADVIVV----LGGDGF-ML 50 (264)
Q Consensus 2 ~~~~~ki~i~~~~~~~a~~~~~~l~~~~~~--~-----~-------------------~~~~Dlii~----iGGDGT-~L 50 (264)
..+..+|-++ .+++......+.+.+..+- . . ...+|+|+. =|.||. ++
T Consensus 3 ~~~~~~ILiV-DD~~~~~~~l~~~L~~~g~~~~v~~a~~g~eAl~~l~~~~~~~~~~~~~~pdlillD~~mP~~~G~el~ 81 (149)
T d1k66a_ 3 GNATQPLLVV-EDSDEDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVL 81 (149)
T ss_dssp SCTTSCEEEE-CCCHHHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHH
T ss_pred CCCCCCEEEE-ECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHH
T ss_conf 8899818999-899999999999999769962799977848999999842211000014588867752444687757999
Q ss_pred HHHHHHH-HCCCEEEEECC-------------CCCCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 9999974-12872994153-------------43320104458789998664201243
Q gi|254780754|r 51 QSFHQSK-EYDKPIYGMNC-------------GSVGFLMNEYCIENLVERLSVAVECT 94 (264)
Q Consensus 51 ~a~~~~~-~~~~PilGIn~-------------G~lGFL~~~~~~~~~~~~l~~~~~~~ 94 (264)
+..|... ...+||+-+.. |--+||.-++..+++.+.+......+
T Consensus 82 ~~ir~~~~~~~ipiI~lT~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l~~~ 139 (149)
T d1k66a_ 82 QEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQTFIKYW 139 (149)
T ss_dssp HHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 9998562137990899968799999999997799889979999999999999999998
No 75
>d1f8ya_ c.23.14.1 (A:) Nucleoside 2-deoxyribosyltransferase {Lactobacillus leichmannii [TaxId: 28039]}
Probab=27.62 E-value=16 Score=14.27 Aligned_cols=34 Identities=9% Similarity=-0.062 Sum_probs=25.1
Q ss_pred HHCCEEEEE-CC----CHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 557799998-79----548999999974128729941534
Q gi|254780754|r 35 EEADVIVVL-GG----DGFMLQSFHQSKEYDKPIYGMNCG 69 (264)
Q Consensus 35 ~~~Dlii~i-GG----DGT~L~a~~~~~~~~~PilGIn~G 69 (264)
+++|++|++ .| .||....-.. ...++||+++..+
T Consensus 76 ~~aD~via~ldg~~~D~Gta~EiG~A-~a~gKpvi~~~~~ 114 (156)
T d1f8ya_ 76 KTNDIMLGVYIPDEEDVGLGMELGYA-LSQGKYVLLVIPD 114 (156)
T ss_dssp HTSSEEEEECCGGGCCHHHHHHHHHH-HHTTCEEEEEECG
T ss_pred HHCCEEEEEECCCCCCCCHHHHHHHH-HHCCCCEEEEECC
T ss_conf 87899999948998987789999999-9869938999627
No 76
>d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]}
Probab=27.05 E-value=16 Score=14.21 Aligned_cols=42 Identities=24% Similarity=0.352 Sum_probs=33.1
Q ss_pred CHHHCCEEEEECCCHH---------HHHHHHHHHHCCCEEEEECCCCCCCC
Q ss_conf 8455779999879548---------99999997412872994153433201
Q gi|254780754|r 33 TSEEADVIVVLGGDGF---------MLQSFHQSKEYDKPIYGMNCGSVGFL 74 (264)
Q Consensus 33 ~~~~~Dlii~iGGDGT---------~L~a~~~~~~~~~PilGIn~G~lGFL 74 (264)
..++.|.|+.-||=|. +.+.++.+...++|+-.|-.|-.+++
T Consensus 83 ~~~dYd~v~iPGG~g~~~~l~~~~~l~~li~~~~~~~k~iaAIChgp~~l~ 133 (221)
T d1u9ca_ 83 DAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLV 133 (221)
T ss_dssp GGSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGT
T ss_pred CHHHCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEE
T ss_conf 986788899279872665240268999999998753582124102630000
No 77
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=26.38 E-value=17 Score=14.13 Aligned_cols=86 Identities=15% Similarity=0.262 Sum_probs=49.5
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCCC-----C---------CHHHCCEEEE----ECCCHH-HHHHHHHHHHCCCEEEEE
Q ss_conf 05999955998999999999987078-----8---------8455779999----879548-999999974128729941
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYGN-----S---------TSEEADVIVV----LGGDGF-MLQSFHQSKEYDKPIYGM 66 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~~-----~---------~~~~~Dlii~----iGGDGT-~L~a~~~~~~~~~PilGI 66 (264)
.|+.++.+ .+...+..+.+.+..+- . ....+|++++ =|.||. +++.++.. ..++|++-+
T Consensus 4 ~~ILiVDD-d~~~~~~l~~~L~~~g~~v~~a~~~~~al~~~~~~~~dlvi~D~~mp~~~G~e~~~~lr~~-~~~~~iI~l 81 (123)
T d1dbwa_ 4 YTVHIVDD-EEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDL-KINIPSIVI 81 (123)
T ss_dssp CEEEEEES-SHHHHHHHHHHHHHTTCEEEEESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHT-TCCCCEEEE
T ss_pred CEEEEEEC-CHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHC-CCCCEEEEE
T ss_conf 98999979-9999999999999879999997787999999760688699973457655235999999824-988759999
Q ss_pred CC-------------CCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 53-------------4332010445878999866420124
Q gi|254780754|r 67 NC-------------GSVGFLMNEYCIENLVERLSVAVEC 93 (264)
Q Consensus 67 n~-------------G~lGFL~~~~~~~~~~~~l~~~~~~ 93 (264)
.. |--+||.-++..+.+.+.+.++..+
T Consensus 82 t~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~a~e~ 121 (123)
T d1dbwa_ 82 TGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASEH 121 (123)
T ss_dssp ECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHTT
T ss_pred EEECCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 8368999999999879988998979999999999999986
No 78
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=25.62 E-value=17 Score=14.04 Aligned_cols=63 Identities=22% Similarity=0.264 Sum_probs=39.3
Q ss_pred CCCCCEEEEEEECCCH--HHHHHHHHHHHHCCCCCHHHCCEEEEECC---CHH----HHHHHHHHHHCCCEEEEECCCC
Q ss_conf 9876505999955998--99999999998707888455779999879---548----9999999741287299415343
Q gi|254780754|r 1 MDRNIQKIHFKASNAK--KAQEAYDKFVKIYGNSTSEEADVIVVLGG---DGF----MLQSFHQSKEYDKPIYGMNCGS 70 (264)
Q Consensus 1 m~~~~~ki~i~~~~~~--~a~~~~~~l~~~~~~~~~~~~Dlii~iGG---DGT----~L~a~~~~~~~~~PilGIn~G~ 70 (264)
|-++.++|..+++-.- ++.+..-++.. .+++|+|+..|- .|. +....+.+...++|++.| .|+
T Consensus 1 ~~~~~~~i~~~sd~hg~~eale~~~~~~~------~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~~~pv~~i-~GN 72 (228)
T d1uf3a_ 1 MRRTVRYILATSNPMGDLEALEKFVKLAP------DTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYV-PGP 72 (228)
T ss_dssp CCCCCCEEEEEECCTTCHHHHHHHHTHHH------HHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEE-CCT
T ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHHH------HCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE-ECC
T ss_conf 98754389999578899999999999876------6198999989999999764168997554320345369999-668
No 79
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=25.36 E-value=17 Score=14.01 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=25.6
Q ss_pred HCCEEEEECCCHHHHHHHHHHH-HCCCEEEEECC
Q ss_conf 5779999879548999999974-12872994153
Q gi|254780754|r 36 EADVIVVLGGDGFMLQSFHQSK-EYDKPIYGMNC 68 (264)
Q Consensus 36 ~~Dlii~iGGDGT~L~a~~~~~-~~~~PilGIn~ 68 (264)
++|+||.+|| |+.+-+++... ...+|++.|-+
T Consensus 85 ~~D~IiavGG-Gs~iD~aK~iA~~~~~p~i~IPT 117 (366)
T d1jq5a_ 85 EAAIVIGVGG-GKTLDTAKAVADELDAYIVIVPT 117 (366)
T ss_dssp TCSEEEEEES-HHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEECC-CCCCCCHHEEEECCCCEEEEHHH
T ss_conf 8868998168-86442200012046653540243
No 80
>d1w25a2 c.23.1.1 (A:141-293) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=25.04 E-value=17 Score=13.98 Aligned_cols=86 Identities=12% Similarity=0.215 Sum_probs=50.1
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCCCC------------CHHHCCEEEE----ECCCHH-HHHHHHHHH-HCCCEEEEEC
Q ss_conf 059999559989999999999870788------------8455779999----879548-999999974-1287299415
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYGNS------------TSEEADVIVV----LGGDGF-MLQSFHQSK-EYDKPIYGMN 67 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~~~------------~~~~~Dlii~----iGGDGT-~L~a~~~~~-~~~~PilGIn 67 (264)
.||.++. +.+...+.........+.. ....+|+|++ =|.||. +++..|... ..++||+-+.
T Consensus 14 ~rILiVD-D~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~DlillD~~mP~~dG~el~~~ir~~~~~~~iPiI~lt 92 (153)
T d1w25a2 14 GRVLIVD-DNERQAQRVAAELGVEHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMV 92 (153)
T ss_dssp CEEEEEC-SCHHHHHHHHHHHTTTSEEEEECCHHHHHHHHHSSCSEEEEETTCSSSCHHHHHHHHHTSGGGTTCCEEEEE
T ss_pred CEEEEEE-CCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 9699996-999999999999997798999705799999836999999997864011114789999954102543058863
Q ss_pred C-------------CCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 3-------------433201044587899986642012
Q gi|254780754|r 68 C-------------GSVGFLMNEYCIENLVERLSVAVE 92 (264)
Q Consensus 68 ~-------------G~lGFL~~~~~~~~~~~~l~~~~~ 92 (264)
. |--+||+-++..+++...+.....
T Consensus 93 ~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~l~ 130 (153)
T d1w25a2 93 DPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQIQ 130 (153)
T ss_dssp CTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 58899999999866854699799999999999999999
No 81
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=25.01 E-value=17 Score=13.97 Aligned_cols=86 Identities=10% Similarity=0.169 Sum_probs=49.7
Q ss_pred EEEEEEECCCHHHHHHHHHHHHH-CCC---CCH---------HHCCEEEE----ECCCHH-HHHHHHHHHHCCCEEEEEC
Q ss_conf 05999955998999999999987-078---884---------55779999----879548-9999999741287299415
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKI-YGN---STS---------EEADVIVV----LGGDGF-MLQSFHQSKEYDKPIYGMN 67 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~-~~~---~~~---------~~~Dlii~----iGGDGT-~L~a~~~~~~~~~PilGIn 67 (264)
+||.++.++..-...+...|... |.. ... ..+|++++ =|+||. +++.++. ...++||+-+.
T Consensus 1 mkILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~eAl~~l~~~~~dlvilD~~mp~~~G~e~~~~lr~-~~~~~piI~lT 79 (137)
T d1ny5a1 1 MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKE-RSPETEVIVIT 79 (137)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHHTCEEEEESSHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHH-HCTTSEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH-HCCCCCEEEEE
T ss_conf 97999955899999999999987999999888999998730255553017776654468999999998-48899899898
Q ss_pred -------------CCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf -------------3433201044587899986642012
Q gi|254780754|r 68 -------------CGSVGFLMNEYCIENLVERLSVAVE 92 (264)
Q Consensus 68 -------------~G~lGFL~~~~~~~~~~~~l~~~~~ 92 (264)
.|-.+||.-++..+.+...+.++..
T Consensus 80 ~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~ 117 (137)
T d1ny5a1 80 GHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIE 117 (137)
T ss_dssp ETTCHHHHHHHHTTTCCEEEEESCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 98999999999986998888497999999999999999
No 82
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=24.74 E-value=18 Score=13.94 Aligned_cols=86 Identities=10% Similarity=0.305 Sum_probs=47.6
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCCCC-----C---------HHHCCEEEE----ECCCHH-HHHHHHHHHH-CCCEEEE
Q ss_conf 059999559989999999999870788-----8---------455779999----879548-9999999741-2872994
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYGNS-----T---------SEEADVIVV----LGGDGF-MLQSFHQSKE-YDKPIYG 65 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~~~-----~---------~~~~Dlii~----iGGDGT-~L~a~~~~~~-~~~PilG 65 (264)
|||-++ ++++...+....+.+..+.+ + ...+|+|++ =|.||. +++..|.... ..+|++-
T Consensus 2 krILiV-DD~~~~~~~l~~~L~~~g~~v~~a~~~~~al~~~~~~~~dlil~D~~mp~~dG~el~~~ir~~~~~~~iPii~ 80 (123)
T d1mb3a_ 2 KKVLIV-EDNELNMKLFHDLLEAQGYETLQTREGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVA 80 (123)
T ss_dssp CEEEEE-CSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEE
T ss_pred CEEEEE-ECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEE
T ss_conf 669999-8889999999999998799999978889999999817988899875027984899999998288768999699
Q ss_pred ECC-------------CCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 153-------------433201044587899986642012
Q gi|254780754|r 66 MNC-------------GSVGFLMNEYCIENLVERLSVAVE 92 (264)
Q Consensus 66 In~-------------G~lGFL~~~~~~~~~~~~l~~~~~ 92 (264)
+.. |--+||.-+++.+++.+.+.++..
T Consensus 81 lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~ 120 (123)
T d1mb3a_ 81 VTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLLE 120 (123)
T ss_dssp EC------CHHHHHHHTCSEEECSSCCHHHHHHHHHHHHS
T ss_pred EEEECCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 9985478999999976998999898999999999999982
No 83
>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}
Probab=24.10 E-value=18 Score=13.86 Aligned_cols=88 Identities=14% Similarity=0.161 Sum_probs=50.9
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCCC-------C----------------CHHHCCEEEEE----CCCHH-HHHHHHHHH
Q ss_conf 05999955998999999999987078-------8----------------84557799998----79548-999999974
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYGN-------S----------------TSEEADVIVVL----GGDGF-MLQSFHQSK 57 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~~-------~----------------~~~~~Dlii~i----GGDGT-~L~a~~~~~ 57 (264)
++|.++ .+++...++.+...+..+. . ....+|+|+.= |.||. +++..|...
T Consensus 4 k~ILiV-dD~~~~~~~l~~~L~~~g~~~~v~~a~~g~~Al~~l~~~~~~~~~~~pdlIllD~~mP~~~G~el~~~ir~~~ 82 (144)
T d1i3ca_ 4 KVILLV-EDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNP 82 (144)
T ss_dssp EEEEEE-CCCHHHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCT
T ss_pred CEEEEE-ECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCC
T ss_conf 889999-7999999999999998699849999789999999998542221257898999978643454168999998572
Q ss_pred H-CCCEEEEECC-------------CCCCCCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 1-2872994153-------------43320104458789998664201243
Q gi|254780754|r 58 E-YDKPIYGMNC-------------GSVGFLMNEYCIENLVERLSVAVECT 94 (264)
Q Consensus 58 ~-~~~PilGIn~-------------G~lGFL~~~~~~~~~~~~l~~~~~~~ 94 (264)
. ..+||+=+.. |--+||.-+++.+++.+.+..+...+
T Consensus 83 ~~~~iPvi~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~l~~~~ 133 (144)
T d1i3ca_ 83 DLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIESFW 133 (144)
T ss_dssp TTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 447982999978899999999997799889979899999999999999988
No 84
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}
Probab=23.66 E-value=19 Score=13.81 Aligned_cols=38 Identities=24% Similarity=0.444 Sum_probs=25.9
Q ss_pred EEEEECCEEEEEEEECCEEEEECC------CCHHH----HHHHCCCEEEEEC
Q ss_conf 987667876531210350798226------65044----6752298177408
Q gi|254780754|r 137 LEVKVDDQVRLPELVCDGLVVSTP------IGSTA----YNFSALGPILPLE 178 (264)
Q Consensus 137 ~~v~id~~~~~~~~~~DGvivSTp------tGSTA----Y~lSaGGpIv~p~ 178 (264)
+.+.-|++ ++++|=||+||- +|||+ ++.+.|-+|++|.
T Consensus 146 ~~~~~~~~----~~~a~~VIiAtGG~S~p~~G~~g~g~~~a~~~~~~i~~~~ 193 (253)
T d2gqfa1 146 FVLQVNST----QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPR 193 (253)
T ss_dssp EEEEETTE----EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCE----EEEECEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
T ss_conf 99944987----9996979994796344546899517999986265401020
No 85
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.52 E-value=19 Score=13.79 Aligned_cols=13 Identities=38% Similarity=0.675 Sum_probs=8.9
Q ss_pred HCCEEEEECCCHH
Q ss_conf 5779999879548
Q gi|254780754|r 36 EADVIVVLGGDGF 48 (264)
Q Consensus 36 ~~Dlii~iGGDGT 48 (264)
+++-|+++-|=|-
T Consensus 11 ~a~~ivvltGAGi 23 (249)
T d1m2ka_ 11 ESKYLVALTGAGV 23 (249)
T ss_dssp TCSSEEEEECGGG
T ss_pred HCCCEEEEECCHH
T ss_conf 6992899979343
No 86
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=23.22 E-value=19 Score=13.76 Aligned_cols=85 Identities=16% Similarity=0.333 Sum_probs=47.6
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCCC--------------CCHHHCCEEEEE----CCCHH-HHHHHHHHH-HCCCEEEE
Q ss_conf 05999955998999999999987078--------------884557799998----79548-999999974-12872994
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYGN--------------STSEEADVIVVL----GGDGF-MLQSFHQSK-EYDKPIYG 65 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~~--------------~~~~~~Dlii~i----GGDGT-~L~a~~~~~-~~~~PilG 65 (264)
|||.++.++ +...+......+..+- -..+.+|++++= |.||. +++..+... ...+|++-
T Consensus 1 KkILiVDD~-~~~~~~l~~~L~~~g~~v~~a~~~~~al~~l~~~~~dlil~D~~mp~~~G~~l~~~lr~~~~~~~~pvi~ 79 (121)
T d1zesa1 1 RRILVVEDE-APIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVM 79 (121)
T ss_dssp CEEEEECSC-HHHHHHHHHHHHHTTCEEEEECSHHHHHHHSSSSCCSEEEECSSCTTSCHHHHHHHHHHSTTTTTSCEEE
T ss_pred CEEEEEECC-HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf 989999689-9999999999998799999987859999999715887897405789997999999998476679992999
Q ss_pred ECC-------------CCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 153-------------43320104458789998664201
Q gi|254780754|r 66 MNC-------------GSVGFLMNEYCIENLVERLSVAV 91 (264)
Q Consensus 66 In~-------------G~lGFL~~~~~~~~~~~~l~~~~ 91 (264)
+.. |--+||+-++..+++...+....
T Consensus 80 lt~~~~~~~~~~~~~~G~~d~l~KP~~~~~L~~~v~~~l 118 (121)
T d1zesa1 80 LTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVM 118 (121)
T ss_dssp EESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 988799999999998799889979899999999999998
No 87
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=22.26 E-value=20 Score=13.64 Aligned_cols=84 Identities=17% Similarity=0.307 Sum_probs=46.6
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHCCC-----CC---------HHHCCEEEE----ECCCHH-HHHHHHHHHHCCCEEEEE
Q ss_conf 05999955998999999999987078-----88---------455779999----879548-999999974128729941
Q gi|254780754|r 6 QKIHFKASNAKKAQEAYDKFVKIYGN-----ST---------SEEADVIVV----LGGDGF-MLQSFHQSKEYDKPIYGM 66 (264)
Q Consensus 6 ~ki~i~~~~~~~a~~~~~~l~~~~~~-----~~---------~~~~Dlii~----iGGDGT-~L~a~~~~~~~~~PilGI 66 (264)
+||.++.++..-+..+...|.. .+- .. .+.+|+|+. =|.||. +++.++. ....+|++=+
T Consensus 2 irILiVdDd~~~~~~l~~~L~~-~g~~v~~a~~~~~al~~l~~~~~dlillD~~mp~~~g~~~~~~lr~-~~~~~piI~l 79 (122)
T d1kgsa2 2 VRVLVVEDERDLADLITEALKK-EMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRE-SGVNTPVLML 79 (122)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-TTCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHH-TTCCCCEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHH-CCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH-CCCCCCEEEE
T ss_conf 7899991899999999999998-7999999756699999998627652200135566216789999985-3899848997
Q ss_pred CC-------------CCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 53-------------43320104458789998664201
Q gi|254780754|r 67 NC-------------GSVGFLMNEYCIENLVERLSVAV 91 (264)
Q Consensus 67 n~-------------G~lGFL~~~~~~~~~~~~l~~~~ 91 (264)
.. |--+||.-++..+++...+....
T Consensus 80 t~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l 117 (122)
T d1kgsa2 80 TALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALI 117 (122)
T ss_dssp ESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHH
T ss_conf 27799999999998599651429999999999999999
No 88
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=22.20 E-value=20 Score=13.63 Aligned_cols=10 Identities=10% Similarity=0.222 Sum_probs=4.0
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999870
Q gi|254780754|r 20 EAYDKFVKIY 29 (264)
Q Consensus 20 ~~~~~l~~~~ 29 (264)
.+.+.+.+..
T Consensus 7 ~v~~~l~~~l 16 (229)
T d2djia3 7 QVYNAINNHA 16 (229)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHC
T ss_conf 9999999538
No 89
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.80 E-value=20 Score=13.64 Aligned_cols=11 Identities=18% Similarity=0.419 Sum_probs=4.2
Q ss_pred EEEECCCHHHH
Q ss_conf 99987954899
Q gi|254780754|r 40 IVVLGGDGFML 50 (264)
Q Consensus 40 ii~iGGDGT~L 50 (264)
++++-|||.|+
T Consensus 84 Vv~i~GDGsf~ 94 (227)
T d1t9ba3 84 VIDIDGDASFN 94 (227)
T ss_dssp EEEEEEHHHHH
T ss_pred EEEECCCCCCC
T ss_conf 99947996201
No 90
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]}
Probab=21.65 E-value=20 Score=13.56 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=28.3
Q ss_pred CCEEEEECCC----------HHHHHHHHHHHHCCCEEEEEC--CCCCCCCC
Q ss_conf 7799998795----------489999999741287299415--34332010
Q gi|254780754|r 37 ADVIVVLGGD----------GFMLQSFHQSKEYDKPIYGMN--CGSVGFLM 75 (264)
Q Consensus 37 ~Dlii~iGGD----------GT~L~a~~~~~~~~~PilGIn--~G~lGFL~ 75 (264)
|=+|.+.||. |..|.+...+...++-++.|| +|-+|||.
T Consensus 115 PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~ 165 (534)
T d1llfa_ 115 PVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLA 165 (534)
T ss_dssp EEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCC
T ss_pred EEEEEECCCCCCCCCCCCCCCHHCCCHHHHCCCCEEEEEEECCCCCCCCCC
T ss_conf 599997788655688877883101342243158868998644887642467
No 91
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=21.59 E-value=20 Score=13.55 Aligned_cols=65 Identities=17% Similarity=0.167 Sum_probs=33.5
Q ss_pred EEEEEEEC--CCHHHHHHHHHHHHH-----C--CCCCHHHCCEEEEECC-CHH----HHH-------HHHH-HHHCCCEE
Q ss_conf 05999955--998999999999987-----0--7888455779999879-548----999-------9999-74128729
Q gi|254780754|r 6 QKIHFKAS--NAKKAQEAYDKFVKI-----Y--GNSTSEEADVIVVLGG-DGF----MLQ-------SFHQ-SKEYDKPI 63 (264)
Q Consensus 6 ~ki~i~~~--~~~~a~~~~~~l~~~-----~--~~~~~~~~Dlii~iGG-DGT----~L~-------a~~~-~~~~~~Pi 63 (264)
+||++++= +..+-.+..+.+... . ..++.+++|.+|.-|| ..+ .+. ++.. +...++|+
T Consensus 3 ikIGvl~l~G~~~~~~~al~~lg~~~~~v~~~~~~~~l~~~D~lIlPGgg~~~~~~~~~~~~~~~~~~i~~~~~~~gkPi 82 (218)
T d2abwa1 3 ITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPI 82 (218)
T ss_dssp EEEEEECTTSCCHHHHHHHHTTCCTTEEEEEECSHHHHHTCSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCE
T ss_pred CEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEE
T ss_conf 88999967886999999999848996189994999998408889976888637999988774566678999998739859
Q ss_pred EEECCCC
Q ss_conf 9415343
Q gi|254780754|r 64 YGMNCGS 70 (264)
Q Consensus 64 lGIn~G~ 70 (264)
|||=.|.
T Consensus 83 lGIC~G~ 89 (218)
T d2abwa1 83 WGTCAGC 89 (218)
T ss_dssp EEETHHH
T ss_pred EEECHHH
T ss_conf 9823778
No 92
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=21.47 E-value=20 Score=13.54 Aligned_cols=38 Identities=21% Similarity=0.278 Sum_probs=18.3
Q ss_pred HHCCEEEEECCCHHHHHHHHHHHHCCCE--EEEE-CCCCCCC
Q ss_conf 5577999987954899999997412872--9941-5343320
Q gi|254780754|r 35 EEADVIVVLGGDGFMLQSFHQSKEYDKP--IYGM-NCGSVGF 73 (264)
Q Consensus 35 ~~~Dlii~iGGDGT~L~a~~~~~~~~~P--ilGI-n~G~lGF 73 (264)
+++|.+++.-| |.....++.+.....| ++.- ..|.+|+
T Consensus 21 ~~~D~iiv~dg-g~~~~~~~~~~~~~~p~~~~~~~~~g~mG~ 61 (183)
T d2ji7a3 21 ANPDISLVNEG-ANALDNTRMIVDMLKPRKRLDSGTWGVMGI 61 (183)
T ss_dssp HCCSSEEEEES-SHHHHHHHHHSCCCSTTCEEECTTTTCTTC
T ss_pred CCCCEEEEECC-HHHHHHHHHHHCCCCCCCEEECCCCCCCCC
T ss_conf 29898999996-328999999831479993886687665550
No 93
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}
Probab=21.04 E-value=21 Score=13.48 Aligned_cols=11 Identities=18% Similarity=0.099 Sum_probs=4.8
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999998707
Q gi|254780754|r 20 EAYDKFVKIYG 30 (264)
Q Consensus 20 ~~~~~l~~~~~ 30 (264)
.+.+.+.+...
T Consensus 10 ~v~~~l~~~l~ 20 (228)
T d2ez9a3 10 QVLRAVNKIAE 20 (228)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHCC
T ss_conf 99999984289
No 94
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=20.79 E-value=16 Score=14.19 Aligned_cols=16 Identities=31% Similarity=0.494 Sum_probs=8.2
Q ss_pred HCCCEEEEECCCCCCCC
Q ss_conf 12872994153433201
Q gi|254780754|r 58 EYDKPIYGMNCGSVGFL 74 (264)
Q Consensus 58 ~~~~PilGIn~G~lGFL 74 (264)
..++||+.--.|+ |.+
T Consensus 45 ~~~iPv~~t~~~~-g~~ 60 (175)
T d2ji7a1 45 ETGIPFLPMGMAK-GLL 60 (175)
T ss_dssp HHTCCEEECTTTB-TTB
T ss_pred HCEEEEECCCCCC-CCC
T ss_conf 3041021234223-568
No 95
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]}
Probab=20.20 E-value=22 Score=13.37 Aligned_cols=45 Identities=11% Similarity=0.052 Sum_probs=30.5
Q ss_pred ECCEEEEEEEECCEEEEEC------------CCCHHH----HHHHCCCEEEEECCCEEEEECCCC
Q ss_conf 6787653121035079822------------665044----675229817740886058630354
Q gi|254780754|r 141 VDDQVRLPELVCDGLVVST------------PIGSTA----YNFSALGPILPLESRHLLLTPVSP 189 (264)
Q Consensus 141 id~~~~~~~~~~DGvivST------------ptGSTA----Y~lSaGGpIv~p~~~~~~itpI~p 189 (264)
.++++ ..++++.||++| |.++|+ -++.||.++.+ .+-+|+-|-+.
T Consensus 177 ~~g~~--~~~~AkaVILATGG~g~~y~~ttn~~~~tGDG~~mA~~aGa~l~d--me~iq~~p~~~ 237 (311)
T d1kf6a2 177 MEGTL--VQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRD--MGGIETDQNCE 237 (311)
T ss_dssp TTTEE--EEEECSCEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTTCCEES--CCEEECCTTSB
T ss_pred CCCCE--EEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEE--CCCCCCCCCCH
T ss_conf 89968--999779799767886544455579999576799998855356020--33211110020
Done!