HHsearch alignment for GI: 254780755 and conserved domain: PRK10888
>PRK10888 octaprenyl diphosphate synthase; Provisional.
Probab=100.00 E-value=0 Score=596.22 Aligned_cols=320 Identities=42% Similarity=0.683 Sum_probs=309.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 94799999999999999999860778758999999999679822799999999997089857866665578999999987
Q gi|254780755|r 1 MKMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLL 80 (322)
Q Consensus 1 ~~~l~~~~~~~l~~v~~~i~~~~~~~~~~l~~~~~~~~~~gGKr~Rp~l~~l~~~~~~~~~~~~~~~a~~iEliH~asLi 80 (322)
T Consensus 3 l~~i~~~v~~dl~~v~~~l~~~~~~~~~~i~~~~~~~~~~GGKRlRP~l~ll~~~~~g~~~~~~~~~AaaiEliH~asLi 82 (323)
T PRK10888 3 LEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLL 82 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999986688188999999988269860859999999998299838899999999999999998
Q ss_pred HHHHHCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 52110112200110121010011023431245788887642102431100012345677777754565542132210357
Q gi|254780755|r 81 HDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEED 160 (322)
Q Consensus 81 HDDI~D~~~~RRg~~t~~~~~G~~~Ail~GD~l~~~a~~~l~~~~~~~~~~~~~~~~~~l~~Gq~~d~~~~~~~~~s~~~ 160 (322)
T Consensus 83 HDDiiD~s~~RRG~pt~h~~~G~~~AIl~GD~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~eGe~~q~~~~~~~~~~~~~ 162 (323)
T PRK10888 83 HDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEEN 162 (323)
T ss_pred HCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
T ss_conf 74656799888998540133044216762029998888866512766899999999999996889999854278999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCH
Q ss_conf 89899864335555443210001122221015799999731116898876411236700038401234542136532100
Q gi|254780755|r 161 YLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240 (322)
Q Consensus 161 y~~ii~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~afQI~DD~ld~~g~~~~~GK~~g~Dl~egk~Tlpii~ 240 (322)
T Consensus 163 yl~~i~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~AFQI~DDlLD~~gd~~~~GK~~g~Dl~eGk~TlPvi~ 242 (323)
T PRK10888 163 YMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGKNVGDDLNEGKPTLPLLH 242 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCHHHHHHH
T ss_conf 99999999999999999999987099999999999999999999999997520247878868996513425864799999
Q ss_pred HHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 11014311000134320368999899999999999749699999999999999999842089998999999999999603
Q gi|254780755|r 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQR 320 (322)
Q Consensus 241 al~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~ll~~~gai~~~~~~~~~~~~~A~~~L~~lp~~~~k~~L~~L~~~ii~R 320 (322)
T Consensus 243 Al~~~~~~~~~~l~~~~~~~~-~~~~~~~v~~~l~~~gai~~a~~~a~~~~~~A~~~L~~lp~s~~r~~L~~La~~~~~R 321 (323)
T PRK10888 243 AMHHGTPEQAAMIRTAIEQGN-GRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQR 321 (323)
T ss_pred HHHHCCHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 998499989999999874788-4999999999999869599999999999999999987089978999999999999817
Q ss_pred C
Q ss_conf 7
Q gi|254780755|r 321 L 321 (322)
Q Consensus 321 ~ 321 (322)
T Consensus 322 ~ 322 (323)
T PRK10888 322 D 322 (323)
T ss_pred C
T ss_conf 8