HHsearch alignment for GI: 254780755 and conserved domain: TIGR02748
>TIGR02748 GerC3_HepT heptaprenyl diphosphate synthase component II; InterPro: IPR014119 The proteins in this entry are component II of the heterodimeric heptaprenyl diphosphate synthase. They are found proximate to the gene for component I (IPR009920 from INTERPRO). This enzyme acts in menaquinone-7 isoprenoid side chain biosynthesis..
Probab=100.00 E-value=0 Score=582.71 Aligned_cols=320 Identities=29% Similarity=0.485 Sum_probs=309.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 947999999999999999998607-787589999999996798227999999999970-898578666655789999999
Q gi|254780755|r 1 MKMLEDLTLKDMEKVNFLILKRIC-SDVEMIPDVVKYLIFSGGKRLRPMLTLATALML-EYRGDNHVLLACAIEFIHTAT 78 (322)
Q Consensus 1 ~~~l~~~~~~~l~~v~~~i~~~~~-~~~~~l~~~~~~~~~~gGKr~Rp~l~~l~~~~~-~~~~~~~~~~a~~iEliH~as 78 (322)
T Consensus 2 L~~~Y~~l~~Di~~iE~EL~~~v~Ga~~~~l~eA~l~LL~AGGKRIRPVFVLLag~fGP~Ydl~~~K~vAV~LELIHMAS 81 (325)
T TIGR02748 2 LKDIYSFLQKDIESIEKELEKAVQGAEHPVLSEAALHLLKAGGKRIRPVFVLLAGKFGPDYDLDKIKHVAVALELIHMAS 81 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 47889998876999999999998520687357899999981894001799986763077533554656765576773532
Q ss_pred HHHHHHHCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 87521101122001101210100110234312457888876421024311000123456777777545655421322103
Q gi|254780755|r 79 LLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTE 158 (322)
Q Consensus 79 LiHDDI~D~~~~RRg~~t~~~~~G~~~Ail~GD~l~~~a~~~l~~~~~~~~~~~~~~~~~~l~~Gq~~d~~~~~~~~~s~ 158 (322)
T Consensus 82 LVHDDVID~A~LRRG~~Ti~skW~NRiAMYTGDYlfA~slE~~t~i~dp~~H~~LS~tivEvc~GEIEQIkDkYN~dQ~l 161 (325)
T TIGR02748 82 LVHDDVIDDADLRRGKPTIKSKWDNRIAMYTGDYLFAKSLETMTEIKDPRAHQILSKTIVEVCLGEIEQIKDKYNFDQNL 161 (325)
T ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCH
T ss_conf 02565205876778842012102773220033589999999985169827889999999988622101001013788860
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 57898998643355554432100011222210157999997311168988764112367000384012345421365321
Q gi|254780755|r 159 EDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPV 238 (322)
Q Consensus 159 ~~y~~ii~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~afQI~DD~ld~~g~~~~~GK~~g~Dl~egk~Tlpi 238 (322)
T Consensus 162 R~YLRRIKRKTALLIA~SCqLGAia~Ga~~~~~~~LY~FGYYvGMSyQI~DDiLDFvgTee~LGKPAG~DLlQGNvTLPv 241 (325)
T TIGR02748 162 RTYLRRIKRKTALLIAASCQLGAIASGADEAIVKKLYWFGYYVGMSYQIIDDILDFVGTEEELGKPAGGDLLQGNVTLPV 241 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 03665666889999998776520005889878773655335420145444321366466311688757653552016788
Q ss_pred CHHHHCCCCCCCHHHHHHCCCC-CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 0011014311000134320368-999899999999999749699999999999999999842089998999999999999
Q gi|254780755|r 239 ILAFQRGTKREKNFWKSTINDG-KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFC 317 (322)
Q Consensus 239 i~al~~~~~~~~~~l~~~~~~~-~~~~~~~~~i~~ll~~~gai~~~~~~~~~~~~~A~~~L~~lp~~~~k~~L~~L~~~i 317 (322)
T Consensus 242 LYAl~d-~~~~K~~i~~v~~~~g~v~~~em~~~i~~vk~~~aI~~a~a~Sd~YL~KA~~~L~~LP~~~ak~~L~~iA~YI 320 (325)
T TIGR02748 242 LYALED-PIGLKKRIEQVLEETGSVTAEEMEELIEEVKKSDAIERAYAVSDRYLKKALELLDGLPDGEAKKLLQEIAKYI 320 (325)
T ss_pred HHHHCC-CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 885159-7888999973034456768889999999985056799999999999999999986278813568899999871
Q ss_pred HCCC
Q ss_conf 6037
Q gi|254780755|r 318 LQRL 321 (322)
Q Consensus 318 i~R~ 321 (322)
T Consensus 321 GkR~ 324 (325)
T TIGR02748 321 GKRK 324 (325)
T ss_pred CCCC
T ss_conf 2678