HHsearch results for GI: 254780755 and protein with PDBid: 1yhl_A

>1yhl_A Farnesyl pyrophosphate synthase; farnesyl diphosphate synthase, bisphosphonate, dimethyl allyl pyrophosphate sulfate, FPPS, transferase; HET: DMA RIS; 1.95A {Trypanosoma cruzi} PDB: 1yhk_A* 1yhm_A* 3iba_A* 3ick_A* 3icm_A* 3icn_A* 3icz_A* 3id0_A*
Probab=100.00  E-value=0  Score=466.05  Aligned_cols=288  Identities=18%  Similarity=0.226  Sum_probs=251.5

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCH-----------HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCH
Q ss_conf             99999999967982279999999999708985-----------7866665578999999987521101122001101210
Q gi|254780755|r   30 IPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-----------DNHVLLACAIEFIHTATLLHDDVVDDSALRRGKVAAR   98 (322)
Q Consensus        30 l~~~~~~~~~~gGKr~Rp~l~~l~~~~~~~~~-----------~~~~~~a~~iEliH~asLiHDDI~D~~~~RRg~~t~~   98 (322)
                      +.+...|.+ +||||+||++++++++++++..           ..+..+|++||++|+||||||||||+|++|||+||+|
T Consensus        36 ~~~~~~y~~-~GGKr~Rp~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~iEllH~asLihDDI~D~s~~RRG~pt~h  114 (362)
T 1yhl_A           36 LRIMMDTTC-LGGKYFRGMTVVNVAEGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWY  114 (362)
T ss_dssp             HHHHHHHHH-SSSCCHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEETTEECGG
T ss_pred             HHHHHHCCC-CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
T ss_conf             999996457-8853102799999999963643455432567789999999999999999999732267998889998742


Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHCCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHCC----------------CC
Q ss_conf             100110234312457888876421024-------3110001234567777775456554213----------------22
Q gi|254780755|r   99 LVWGNQTSVLVGDFLLSQAFCMVIETK-------SQEALEALSLVACTLAEGELRQLSLSKN----------------LD  155 (322)
Q Consensus        99 ~~~G~~~Ail~GD~l~~~a~~~l~~~~-------~~~~~~~~~~~~~~l~~Gq~~d~~~~~~----------------~~  155 (322)
                      ++||++.||++||+|++.++..+....       ..++++.++++...++.||++|+.+...                .+
T Consensus       115 ~~~G~~~ai~~gD~l~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GQ~~d~~~~~~~~~~d~e~~~~~~~~~~~  194 (362)
T 1yhl_A          115 RFPGVTTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQPMTTDFAE  194 (362)
T ss_dssp             GSTTTHHHHHHHHHHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHHHHHHHTTTBCGGGCCTTSCCCBCSSCTT
T ss_pred             HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCHH
T ss_conf             30681899996639999999999987524684558999999999999999998704124404631118988630256200


Q ss_pred             CCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             10357898998643355-55443210001122221-01579999973111689887641123670003840123454213
Q gi|254780755|r  156 VTEEDYLHVIKSKTAVL-FSAALEVSSLIAGVQNS-VRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGK  233 (322)
Q Consensus       156 ~s~~~y~~ii~~KTa~L-f~~~~~~ga~lag~~~~-~~~~l~~fG~~lG~afQI~DD~ld~~g~~~~~GK~~g~Dl~egk  233 (322)
                      +|+++|++|+.+|||+| |.+|+.+|++++|.+++ ..+.++.||.++|+||||+||++|++|+++.+|| +|+||++||
T Consensus       195 ~t~~~Y~~~i~~KTa~L~~~~~~~~g~~~~g~~~~~~~~~l~~~g~~lGiaFQI~DDilD~~~d~~~~GK-~g~Dl~egK  273 (362)
T 1yhl_A          195 FTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVAHLIGEYFQVQDDVMDCFTPPEQLGK-VGTDIEDAK  273 (362)
T ss_dssp             CSHHHHHHHHHHHTHHHHTHHHHHHHHHHTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHSS-CCCTTTTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC-CHHHHHCCC
T ss_conf             5899999999998746789999987787713631889988876787999999999998870079788687-446787697


Q ss_pred             CCCCCCHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC--CCHHHHHHH
Q ss_conf             653210011014311000134320368999899999999999749699999999999999999842089--998999999
Q gi|254780755|r  234 PTLPVILAFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLP--DSSWKKSLM  311 (322)
Q Consensus       234 ~Tlpii~al~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~ll~~~gai~~~~~~~~~~~~~A~~~L~~lp--~~~~k~~L~  311 (322)
                      +|||+++|++.+++++++.+.++++++  ++++++.+.+++.++|+.+++...++++.+++.+.++.++  ++..++.|.
T Consensus       274 ~Tlp~i~al~~~~~~~~~~l~~~~~~~--d~~~v~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~  351 (362)
T 1yhl_A          274 CSWLAVTFLGKANAAQVAEFKANYGDK--DPAKVAVVKRLYSEANLQADFAAYEAEVVREVESLIEQLKVKSPTFAESVA  351 (362)
T ss_dssp             CCHHHHHHHTTCCHHHHHHHHHHTTCC--CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             CHHHHHHHHHHCCHHHHHHHHHHHCCC--CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             359999999809999999999986899--989999999999986979999999999999999999867578768999999


Q ss_pred             HHHHHHHCCC
Q ss_conf             9999996037
Q gi|254780755|r  312 EVVDFCLQRL  321 (322)
Q Consensus       312 ~L~~~ii~R~  321 (322)
                      .+++++.+|.
T Consensus       352 ~~~~~i~kR~  361 (362)
T 1yhl_A          352 VVWEKTHKRK  361 (362)
T ss_dssp             HHHHHHHTCC
T ss_pred             HHHHHHHCCC
T ss_conf             9999997488