HHsearch results for GI: 254780755 and protein with PDBid: 2azj_A
>2azj_A Geranylgeranyl pyrophosphate synthetase; hexpps, trans-prenyltransferase; 2.40A {Sulfolobus solfataricus} PDB: 2azk_A
Probab=100.00 E-value=0 Score=435.45 Aligned_cols=261 Identities=23% Similarity=0.329 Sum_probs=227.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7999999999999999998607787-589999999996798227999999999970898578666655789999999875
Q gi|254780755|r 3 MLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 (322)
Q Consensus 3 ~l~~~~~~~l~~v~~~i~~~~~~~~-~~l~~~~~~~~~~gGKr~Rp~l~~l~~~~~~~~~~~~~~~a~~iEliH~asLiH 81 (322)
.+.++..+..+.|++.|.+.+.+.. +.+.+++.|++ +||||+||.||+++++++|++.+.++++|+++|++|+|||||
T Consensus 10 ~~~~~~~~~~~~i~~~i~~~l~~~~~~~l~~~~~y~~-~gGKr~Rp~L~l~~~~~~g~~~~~~~~~A~aiEllH~asLih 88 (289)
T 2azj_A 10 SIIEFWLEAKATIDRLIEQFLNSNRDWDLVDISSYIL-KDGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSASLAL 88 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCTTHHHHHHHHH-SCCCCHHHHHHHHHHHHTTCCGGGGHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH-CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 7999999999999999999863379756999999786-587648999999999982998889999999999999999972
Q ss_pred HHHHCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 21101122001101210100110234312457888876421024311000123456777777545655421322103578
Q gi|254780755|r 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 (322)
Q Consensus 82 DDI~D~~~~RRg~~t~~~~~G~~~Ail~GD~l~~~a~~~l~~~~~~~~~~~~~~~~~~l~~Gq~~d~~~~~~~~~s~~~y 161 (322)
|||||+|++|||+||+|.+||++.||++||||++.++++++...++.+++.+++++..+++||.+|+. ++++|
T Consensus 89 DDi~D~~~~RRg~pt~~~~~G~~~Ail~Gd~L~~~a~~~l~~~~~~~~~~~~~~~~~~~~~Gq~~d~~-------~~~~y 161 (289)
T 2azj_A 89 CDIVDLDATRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGDDALNTSIELWKDTSVGALRDMY-------DNSDY 161 (289)
T ss_dssp HHHHTTCCBSSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-------TTSCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC-------CHHHH
T ss_conf 78778887788965526578958999998999976577765214422589999887777641455216-------68899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC----CCCCCHHHHHHHHCCCCCC
Q ss_conf 989986433555544321000112222101579999973111689887641123670----0038401234542136532
Q gi|254780755|r 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV----NEMGKNIGEDFRNGKPTLP 237 (322)
Q Consensus 162 ~~ii~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~afQI~DD~ld~~g~~----~~~GK~~g~Dl~egk~Tlp 237 (322)
++|+++|||+||++||.+|+++++.+ +..+.+.+||.++|+||||+||++|++|++ +.+|||+|+|+++||.|+|
T Consensus 162 ~~~i~~KTg~Lf~~~~~~ga~~~~~~-~~~~~l~~~g~~lG~afQi~DD~lD~~~~~~~~~~~~gK~~g~Dl~egK~T~p 240 (289)
T 2azj_A 162 IRTIELKTGSLFKLSTVLSAYASKHY-NTKQQMLDVGKYLGIIYQVIDDFVDYKTKKVEEIDGSAKQLFKYYREGKLEEY 240 (289)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTTCG-GGHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCTTGGGGHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHH
T ss_conf 99999998899999987689863881-02268999987767899999998873377222210028862057875863699
Q ss_pred CCHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 100110143110001343203689998999999999
Q gi|254780755|r 238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFII 273 (322)
Q Consensus 238 ii~al~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~l 273 (322)
++++++..+...++.+..... .....+++..+.++
T Consensus 241 ~~~~~~~~~~~~~e~l~~~~~-~~~~~~~i~~l~e~ 275 (289)
T 2azj_A 241 VRSVYLEYKQKYDELISNIPF-QSKYLSEIRSLPEF 275 (289)
T ss_dssp HHHHHHHHHHHHHHHHHTSCC-CGGGHHHHHTHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHC-CCCCHHHHHHHHHH
T ss_conf 999999777999999984330-65318999999999