HHsearch results for GI: 254780755 and protein with PDBid: 2azj_A

>2azj_A Geranylgeranyl pyrophosphate synthetase; hexpps, trans-prenyltransferase; 2.40A {Sulfolobus solfataricus} PDB: 2azk_A
Probab=100.00  E-value=0  Score=435.45  Aligned_cols=261  Identities=23%  Similarity=0.329  Sum_probs=227.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7999999999999999998607787-589999999996798227999999999970898578666655789999999875
Q gi|254780755|r    3 MLEDLTLKDMEKVNFLILKRICSDV-EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH   81 (322)
Q Consensus         3 ~l~~~~~~~l~~v~~~i~~~~~~~~-~~l~~~~~~~~~~gGKr~Rp~l~~l~~~~~~~~~~~~~~~a~~iEliH~asLiH   81 (322)
                      .+.++..+..+.|++.|.+.+.+.. +.+.+++.|++ +||||+||.||+++++++|++.+.++++|+++|++|+|||||
T Consensus        10 ~~~~~~~~~~~~i~~~i~~~l~~~~~~~l~~~~~y~~-~gGKr~Rp~L~l~~~~~~g~~~~~~~~~A~aiEllH~asLih   88 (289)
T 2azj_A           10 SIIEFWLEAKATIDRLIEQFLNSNRDWDLVDISSYIL-KDGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSASLAL   88 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCSCTTHHHHHHHHH-SCCCCHHHHHHHHHHHHTTCCGGGGHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH-CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             7999999999999999999863379756999999786-587648999999999982998889999999999999999972


Q ss_pred             HHHHCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf             21101122001101210100110234312457888876421024311000123456777777545655421322103578
Q gi|254780755|r   82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY  161 (322)
Q Consensus        82 DDI~D~~~~RRg~~t~~~~~G~~~Ail~GD~l~~~a~~~l~~~~~~~~~~~~~~~~~~l~~Gq~~d~~~~~~~~~s~~~y  161 (322)
                      |||||+|++|||+||+|.+||++.||++||||++.++++++...++.+++.+++++..+++||.+|+.       ++++|
T Consensus        89 DDi~D~~~~RRg~pt~~~~~G~~~Ail~Gd~L~~~a~~~l~~~~~~~~~~~~~~~~~~~~~Gq~~d~~-------~~~~y  161 (289)
T 2azj_A           89 CDIVDLDATRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGDDALNTSIELWKDTSVGALRDMY-------DNSDY  161 (289)
T ss_dssp             HHHHTTCCBSSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-------TTSCH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC-------CHHHH
T ss_conf             78778887788965526578958999998999976577765214422589999887777641455216-------68899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC----CCCCCHHHHHHHHCCCCCC
Q ss_conf             989986433555544321000112222101579999973111689887641123670----0038401234542136532
Q gi|254780755|r  162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEV----NEMGKNIGEDFRNGKPTLP  237 (322)
Q Consensus       162 ~~ii~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~afQI~DD~ld~~g~~----~~~GK~~g~Dl~egk~Tlp  237 (322)
                      ++|+++|||+||++||.+|+++++.+ +..+.+.+||.++|+||||+||++|++|++    +.+|||+|+|+++||.|+|
T Consensus       162 ~~~i~~KTg~Lf~~~~~~ga~~~~~~-~~~~~l~~~g~~lG~afQi~DD~lD~~~~~~~~~~~~gK~~g~Dl~egK~T~p  240 (289)
T 2azj_A          162 IRTIELKTGSLFKLSTVLSAYASKHY-NTKQQMLDVGKYLGIIYQVIDDFVDYKTKKVEEIDGSAKQLFKYYREGKLEEY  240 (289)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHTTCG-GGHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCTTGGGGHHHHTTTCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHH
T ss_conf             99999998899999987689863881-02268999987767899999998873377222210028862057875863699


Q ss_pred             CCHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             100110143110001343203689998999999999
Q gi|254780755|r  238 VILAFQRGTKREKNFWKSTINDGKISVENLKKAFII  273 (322)
Q Consensus       238 ii~al~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~l  273 (322)
                      ++++++..+...++.+..... .....+++..+.++
T Consensus       241 ~~~~~~~~~~~~~e~l~~~~~-~~~~~~~i~~l~e~  275 (289)
T 2azj_A          241 VRSVYLEYKQKYDELISNIPF-QSKYLSEIRSLPEF  275 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCC-CGGGHHHHHTHHHH
T ss_pred             HHHHHHHCCHHHHHHHHHHHC-CCCCHHHHHHHHHH
T ss_conf             999999777999999984330-65318999999999