HHsearch results for GI: 254780755 and protein with PDBid: 3aqb_B

>3aqb_B Component B of hexaprenyl diphosphate synthase; prenyltransferase, transferase; 2.40A {Micrococcus luteus} PDB: 3aqc_B*
Probab=100.00  E-value=0  Score=518.32  Aligned_cols=317  Identities=27%  Similarity=0.438  Sum_probs=300.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999860778758999999999679822799999999997089857866665578999999987521
Q gi|254780755|r    4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD   83 (322)
Q Consensus         4 l~~~~~~~l~~v~~~i~~~~~~~~~~l~~~~~~~~~~gGKr~Rp~l~~l~~~~~~~~~~~~~~~a~~iEliH~asLiHDD   83 (322)
                      ++.++.+++.+|++.|.+.+.++.+.+.++.+|++.+||||+||++++++++++|++.+.++++|+++|++|+|||||||
T Consensus         6 ~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~gGKrlRp~l~l~~~~~~~~~~~~~~~~A~avEllH~asLIhDD   85 (325)
T 3aqb_B            6 YKAFLNPYIIEVEKRLYECIQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDLIRTAVSLELVHMASLVHDD   85 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSCCCCHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999999999875578578999999998389851869999999988299878999999999999999998588


Q ss_pred             HHCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf             10112200110121010011023431245788887642102431100012345677777754565542132210357898
Q gi|254780755|r   84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH  163 (322)
Q Consensus        84 I~D~~~~RRg~~t~~~~~G~~~Ail~GD~l~~~a~~~l~~~~~~~~~~~~~~~~~~l~~Gq~~d~~~~~~~~~s~~~y~~  163 (322)
                      |+|+|+.|||+||+|.+||+..||++||++++.++..+....+..+.+.++.+...++.||+.++....+.+.++++|++
T Consensus        86 I~D~~~~RRg~pt~h~~~G~~~ail~Gd~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~  165 (325)
T 3aqb_B           86 YIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKFHQIFSKTILEVCFGEFDQMADRFNYPVSFTAYLR  165 (325)
T ss_dssp             HHHTCCEETTEECHHHHTCHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             88899887899876653146899983467888777753213346899999998765411418998886078889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHH
Q ss_conf             99864335555443210001122221015799999731116898876411236700038401234542136532100110
Q gi|254780755|r  164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ  243 (322)
Q Consensus       164 ii~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~afQI~DD~ld~~g~~~~~GK~~g~Dl~egk~Tlpii~al~  243 (322)
                      |++.|||+||+++|.+|++++|.+++..+.+++||.++|+||||+||++|++|+++.+|||+|+||++||+|||++++++
T Consensus       166 ii~~KT~~l~~~~~~~~ail~~~~~~~~~~l~~~g~~lGiafQi~DD~ld~~~~~~~~GK~~g~Di~egK~T~p~i~al~  245 (325)
T 3aqb_B          166 RINRKTAILIEASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIA  245 (325)
T ss_dssp             HHHHHTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHSSCTTHHHHTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHCCCCCCHHHHCCCCCHHHHHHHH
T ss_conf             99999999999999999997699756563599999999999983441320358865519870208776996689999999


Q ss_pred             CCCCCCCHHHHHHCCCC--CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             14311000134320368--9998999999999997496999999999999999998420899989999999999996037
Q gi|254780755|r  244 RGTKREKNFWKSTINDG--KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL  321 (322)
Q Consensus       244 ~~~~~~~~~l~~~~~~~--~~~~~~~~~i~~ll~~~gai~~~~~~~~~~~~~A~~~L~~lp~~~~k~~L~~L~~~ii~R~  321 (322)
                      ++++.+++.+.+++++.  ..+.+.++.+..++++++ +++++.++..|.++|+++|+.||+++.|..|++|++|+++|.
T Consensus       246 ~~~~~~~~~l~~il~~~~~~~~~e~~~~~~~~~~~~~-i~~a~~~~~~~~~~A~~~l~~lp~~~~k~~L~~l~~~i~~R~  324 (325)
T 3aqb_B          246 NLKEQDDDKLEAVVKHLTSTSDDEVYQYIVSQVKQYG-IEPAELLSRKYGDKAKYHLSQLQDSNIKDYLEEIHEKMLKRV  324 (325)
T ss_dssp             HHHHTTCCHHHHHHHTCCTTCCHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHTTTT
T ss_pred             HCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             6889779999999850546995999999999997080-999999999999999999866999789999999999997588