HHsearch results for GI: 254780755 and protein with PDBid: 3aqb_B
>3aqb_B Component B of hexaprenyl diphosphate synthase; prenyltransferase, transferase; 2.40A {Micrococcus luteus} PDB: 3aqc_B*
Probab=100.00 E-value=0 Score=518.32 Aligned_cols=317 Identities=27% Similarity=0.438 Sum_probs=300.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999860778758999999999679822799999999997089857866665578999999987521
Q gi|254780755|r 4 LEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDD 83 (322)
Q Consensus 4 l~~~~~~~l~~v~~~i~~~~~~~~~~l~~~~~~~~~~gGKr~Rp~l~~l~~~~~~~~~~~~~~~a~~iEliH~asLiHDD 83 (322)
++.++.+++.+|++.|.+.+.++.+.+.++.+|++.+||||+||++++++++++|++.+.++++|+++|++|+|||||||
T Consensus 6 ~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~gGKrlRp~l~l~~~~~~~~~~~~~~~~A~avEllH~asLIhDD 85 (325)
T 3aqb_B 6 YKAFLNPYIIEVEKRLYECIQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDLIRTAVSLELVHMASLVHDD 85 (325)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSCCCCHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999875578578999999998389851869999999988299878999999999999999998588
Q ss_pred HHCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 10112200110121010011023431245788887642102431100012345677777754565542132210357898
Q gi|254780755|r 84 VVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDYLH 163 (322)
Q Consensus 84 I~D~~~~RRg~~t~~~~~G~~~Ail~GD~l~~~a~~~l~~~~~~~~~~~~~~~~~~l~~Gq~~d~~~~~~~~~s~~~y~~ 163 (322)
|+|+|+.|||+||+|.+||+..||++||++++.++..+....+..+.+.++.+...++.||+.++....+.+.++++|++
T Consensus 86 I~D~~~~RRg~pt~h~~~G~~~ail~Gd~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~ 165 (325)
T 3aqb_B 86 YIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKFHQIFSKTILEVCFGEFDQMADRFNYPVSFTAYLR 165 (325)
T ss_dssp HHHTCCEETTEECHHHHTCHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 88899887899876653146899983467888777753213346899999998765411418998886078889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHH
Q ss_conf 99864335555443210001122221015799999731116898876411236700038401234542136532100110
Q gi|254780755|r 164 VIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILAFQ 243 (322)
Q Consensus 164 ii~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~afQI~DD~ld~~g~~~~~GK~~g~Dl~egk~Tlpii~al~ 243 (322)
|++.|||+||+++|.+|++++|.+++..+.+++||.++|+||||+||++|++|+++.+|||+|+||++||+|||++++++
T Consensus 166 ii~~KT~~l~~~~~~~~ail~~~~~~~~~~l~~~g~~lGiafQi~DD~ld~~~~~~~~GK~~g~Di~egK~T~p~i~al~ 245 (325)
T 3aqb_B 166 RINRKTAILIEASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIA 245 (325)
T ss_dssp HHHHHTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHSSCTTHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHCCCCCCHHHHCCCCCHHHHHHHH
T ss_conf 99999999999999999997699756563599999999999983441320358865519870208776996689999999
Q ss_pred CCCCCCCHHHHHHCCCC--CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 14311000134320368--9998999999999997496999999999999999998420899989999999999996037
Q gi|254780755|r 244 RGTKREKNFWKSTINDG--KISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 (322)
Q Consensus 244 ~~~~~~~~~l~~~~~~~--~~~~~~~~~i~~ll~~~gai~~~~~~~~~~~~~A~~~L~~lp~~~~k~~L~~L~~~ii~R~ 321 (322)
++++.+++.+.+++++. ..+.+.++.+..++++++ +++++.++..|.++|+++|+.||+++.|..|++|++|+++|.
T Consensus 246 ~~~~~~~~~l~~il~~~~~~~~~e~~~~~~~~~~~~~-i~~a~~~~~~~~~~A~~~l~~lp~~~~k~~L~~l~~~i~~R~ 324 (325)
T 3aqb_B 246 NLKEQDDDKLEAVVKHLTSTSDDEVYQYIVSQVKQYG-IEPAELLSRKYGDKAKYHLSQLQDSNIKDYLEEIHEKMLKRV 324 (325)
T ss_dssp HHHHTTCCHHHHHHHTCCTTCCHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHTTTT
T ss_pred HCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 6889779999999850546995999999999997080-999999999999999999866999789999999999997588