HHsearch results for GI: 254780755 and protein with PDBid: 3oyr_A
>3oyr_A Trans-isoprenyl diphosphate synthase; isoprenyl synthase, PSI, protein structure initiative; HET: IPE; 2.00A {Caulobacter crescentus}
Probab=100.00 E-value=0 Score=571.80 Aligned_cols=321 Identities=47% Similarity=0.733 Sum_probs=313.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 47999999999999999998607787589999999996798227999999999970898578666655789999999875
Q gi|254780755|r 2 KMLEDLTLKDMEKVNFLILKRICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLH 81 (322)
Q Consensus 2 ~~l~~~~~~~l~~v~~~i~~~~~~~~~~l~~~~~~~~~~gGKr~Rp~l~~l~~~~~~~~~~~~~~~a~~iEliH~asLiH 81 (322)
..+..++..+|..|++.|.+.+.++.|++.++++|++.+||||+||+||+++++++|++.+.++++|+++|+||+|||||
T Consensus 25 ~~~~~~~~~d~~~v~~~i~~~l~s~~~~i~~~~~~~~~~gGKrlRp~l~l~~~~~~~~~~~~~~~~A~aiEliH~asLiH 104 (345)
T 3oyr_A 25 DRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLH 104 (345)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHTCCSSTHHHHHHHHHHTTTCCCHHHHHHHHHHHHTTCCSSTHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999876882779999999874898517399999999981998789999999999999999986
Q ss_pred HHHHCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 21101122001101210100110234312457888876421024311000123456777777545655421322103578
Q gi|254780755|r 82 DDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGELRQLSLSKNLDVTEEDY 161 (322)
Q Consensus 82 DDI~D~~~~RRg~~t~~~~~G~~~Ail~GD~l~~~a~~~l~~~~~~~~~~~~~~~~~~l~~Gq~~d~~~~~~~~~s~~~y 161 (322)
|||||+|+.|||+||+|.+||+++||++||||++++|..+++..+..+++.++++...+++||+.|.....+...++++|
T Consensus 105 DDi~D~~~~RRG~pt~~~~~G~~~Ail~GD~L~~~a~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~y 184 (345)
T 3oyr_A 105 DDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVY 184 (345)
T ss_dssp TTTC---------CCCSCCTTHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHTSSCSSCCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH
T ss_conf 87778875667998857366842888999999999887544111068899999999999731068877622777668999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHH
Q ss_conf 98998643355554432100011222210157999997311168988764112367000384012345421365321001
Q gi|254780755|r 162 LHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241 (322)
Q Consensus 162 ~~ii~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~afQI~DD~ld~~g~~~~~GK~~g~Dl~egk~Tlpii~a 241 (322)
++|+.+|||+||+++|.+|++++|++++..+.+.+||+++|+||||+||++|++|+++.+|||.|+||++||+|||++++
T Consensus 185 l~ii~~KTa~L~~~~~~~ga~~~~~~~~~~~~l~~~G~~lG~AFQI~DDllD~~~~~~~~GK~~g~Dl~egk~Tlp~i~a 264 (345)
T 3oyr_A 185 LEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLA 264 (345)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTC-------------------CCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHCCCCCHHHHHH
T ss_conf 99999987489999998799883799999999998889999999998765413434676277754235249722999999
Q ss_pred HHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 10143110001343203689998999999999997496999999999999999998420899989999999999996037
Q gi|254780755|r 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRCLPDSSWKKSLMEVVDFCLQRL 321 (322)
Q Consensus 242 l~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~ll~~~gai~~~~~~~~~~~~~A~~~L~~lp~~~~k~~L~~L~~~ii~R~ 321 (322)
+++.++.+++.+..+++++..+++++++++++++++|++++++++++.|.++|+++|+.||+++.|+.|.+|++|+++|.
T Consensus 265 le~~~~~~~~~l~~~~~~~~~~~~~~~~i~~lv~~~g~i~~a~~~a~~~~~~A~~~L~~lp~s~~k~~L~~L~~~~~~Rk 344 (345)
T 3oyr_A 265 IARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDWREALEELADFAVSRR 344 (345)
T ss_dssp HHHSCSHHHHHHHHHCC----CCSSHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTTTSCSSHHHHHHHHHHHHHHHC-
T ss_pred HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 98699999999999873767999999999999998698999999999999999999866999889999999999998748
Q ss_pred C
Q ss_conf 9
Q gi|254780755|r 322 N 322 (322)
Q Consensus 322 ~ 322 (322)
|
T Consensus 345 s 345 (345)
T 3oyr_A 345 A 345 (345)
T ss_dssp -
T ss_pred C
T ss_conf 9