HHsearch results for GI: 254780755 and protein with PDBid: 3p8l_A
>3p8l_A Geranyltranstransferase; isoprenyl synthase, structural genomics, PSI, protein struct initiative, nysgrc; 2.00A {Enterococcus faecalis}
Probab=100.00 E-value=0 Score=435.67 Aligned_cols=245 Identities=29% Similarity=0.472 Sum_probs=219.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHH
Q ss_conf 7999999999999999998607--7875899999999967982279999999999708985-786666557899999998
Q gi|254780755|r 3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATL 79 (322)
Q Consensus 3 ~l~~~~~~~l~~v~~~i~~~~~--~~~~~l~~~~~~~~~~gGKr~Rp~l~~l~~~~~~~~~-~~~~~~a~~iEliH~asL 79 (322)
.+.+..++.+..|++.|.+.+. ++++.+.+++.|.+.+||||+||.||+++++++|++. +..+++|+++||+|+|||
T Consensus 9 ~~~~~~~~~~~~v~~~l~~~~~~~~~~~~l~~~~~y~l~~gGKr~Rp~L~l~~~~~~g~~~~~~~~~~A~avEllH~asL 88 (302)
T 3p8l_A 9 SLTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSL 88 (302)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 19999999999999999999873488778999999887089630869999999998399951778999999999999999
Q ss_pred HHHHHH--CHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCC-----CCCCHHHHHHHH--HHHHHHHHHHHH
Q ss_conf 752110--11220011012101001102343124578888764210243-----110001234567--777775456554
Q gi|254780755|r 80 LHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QEALEALSLVAC--TLAEGELRQLSL 150 (322)
Q Consensus 80 iHDDI~--D~~~~RRg~~t~~~~~G~~~Ail~GD~l~~~a~~~l~~~~~-----~~~~~~~~~~~~--~l~~Gq~~d~~~ 150 (322)
|||||+ |+++.|||+||+|.+||++.||++||+|++.++++++.... ..++..++.+.. .++.||..|+..
T Consensus 89 IHDDI~d~D~~~~RRg~pt~~~~~G~~~Ail~GD~l~~~a~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gq~~d~~~ 168 (302)
T 3p8l_A 89 IHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVSGQMGDIEG 168 (302)
T ss_dssp HHHHSTTTTCCSEETTEECHHHHHCHHHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHSTTTHHHHHHHHHHT
T ss_pred HHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97886135777543568860102488999981148799999999870378179999999999998899999998999870
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 21322103578989986433555544321000112222101579999973111689887641123670003840123454
Q gi|254780755|r 151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR 230 (322)
Q Consensus 151 ~~~~~~s~~~y~~ii~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~afQI~DD~ld~~g~~~~~GK~~g~Dl~ 230 (322)
. +...++++|++|+++|||+||++||.+|++++|++++..+.+++||+++|+||||+||++|++|+++.+|||+|+|++
T Consensus 169 ~-~~~~~~~~y~~i~~~KTa~lf~~~~~~ga~la~~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~~~~~~GK~~g~Dl~ 247 (302)
T 3p8l_A 169 E-KVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEA 247 (302)
T ss_dssp T-TSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------------
T ss_pred H-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHH
T ss_conf 0-457989999999997799999999973130048857889999999999888864159878534898785997206988
Q ss_pred HCCCCCCCCHHHHCCCCC
Q ss_conf 213653210011014311
Q gi|254780755|r 231 NGKPTLPVILAFQRGTKR 248 (322)
Q Consensus 231 egk~Tlpii~al~~~~~~ 248 (322)
+||+|||++++++.+.+.
T Consensus 248 ~gK~Tlp~i~~l~~a~~~ 265 (302)
T 3p8l_A 248 LNKSTYPALLGIAGAKDA 265 (302)
T ss_dssp ---CCHHHHHCHHHHHHH
T ss_pred CCCCCHHHHHHHHHCHHH
T ss_conf 599849999999867799