HHsearch results for GI: 254780755 and protein with PDBid: 3p8l_A

>3p8l_A Geranyltranstransferase; isoprenyl synthase, structural genomics, PSI, protein struct initiative, nysgrc; 2.00A {Enterococcus faecalis}
Probab=100.00  E-value=0  Score=435.67  Aligned_cols=245  Identities=29%  Similarity=0.472  Sum_probs=219.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHH
Q ss_conf             7999999999999999998607--7875899999999967982279999999999708985-786666557899999998
Q gi|254780755|r    3 MLEDLTLKDMEKVNFLILKRIC--SDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRG-DNHVLLACAIEFIHTATL   79 (322)
Q Consensus         3 ~l~~~~~~~l~~v~~~i~~~~~--~~~~~l~~~~~~~~~~gGKr~Rp~l~~l~~~~~~~~~-~~~~~~a~~iEliH~asL   79 (322)
                      .+.+..++.+..|++.|.+.+.  ++++.+.+++.|.+.+||||+||.||+++++++|++. +..+++|+++||+|+|||
T Consensus         9 ~~~~~~~~~~~~v~~~l~~~~~~~~~~~~l~~~~~y~l~~gGKr~Rp~L~l~~~~~~g~~~~~~~~~~A~avEllH~asL   88 (302)
T 3p8l_A            9 SLTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSL   88 (302)
T ss_dssp             CSTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             19999999999999999999873488778999999887089630869999999998399951778999999999999999


Q ss_pred             HHHHHH--CHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCC-----CCCCHHHHHHHH--HHHHHHHHHHHH
Q ss_conf             752110--11220011012101001102343124578888764210243-----110001234567--777775456554
Q gi|254780755|r   80 LHDDVV--DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKS-----QEALEALSLVAC--TLAEGELRQLSL  150 (322)
Q Consensus        80 iHDDI~--D~~~~RRg~~t~~~~~G~~~Ail~GD~l~~~a~~~l~~~~~-----~~~~~~~~~~~~--~l~~Gq~~d~~~  150 (322)
                      |||||+  |+++.|||+||+|.+||++.||++||+|++.++++++....     ..++..++.+..  .++.||..|+..
T Consensus        89 IHDDI~d~D~~~~RRg~pt~~~~~G~~~Ail~GD~l~~~a~~ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gq~~d~~~  168 (302)
T 3p8l_A           89 IHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVLLMQQLAKAAGNQGMVSGQMGDIEG  168 (302)
T ss_dssp             HHHHSTTTTCCSEETTEECHHHHHCHHHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHSTTTHHHHHHHHHHT
T ss_pred             HHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             97886135777543568860102488999981148799999999870378179999999999998899999998999870


Q ss_pred             HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf             21322103578989986433555544321000112222101579999973111689887641123670003840123454
Q gi|254780755|r  151 SKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFR  230 (322)
Q Consensus       151 ~~~~~~s~~~y~~ii~~KTa~Lf~~~~~~ga~lag~~~~~~~~l~~fG~~lG~afQI~DD~ld~~g~~~~~GK~~g~Dl~  230 (322)
                      . +...++++|++|+++|||+||++||.+|++++|++++..+.+++||+++|+||||+||++|++|+++.+|||+|+|++
T Consensus       169 ~-~~~~~~~~y~~i~~~KTa~lf~~~~~~ga~la~~~~~~~~~l~~~g~~lGiafQi~DD~lD~~~~~~~~GK~~g~Dl~  247 (302)
T 3p8l_A          169 E-KVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEA  247 (302)
T ss_dssp             T-TSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------------
T ss_pred             H-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHH
T ss_conf             0-457989999999997799999999973130048857889999999999888864159878534898785997206988


Q ss_pred             HCCCCCCCCHHHHCCCCC
Q ss_conf             213653210011014311
Q gi|254780755|r  231 NGKPTLPVILAFQRGTKR  248 (322)
Q Consensus       231 egk~Tlpii~al~~~~~~  248 (322)
                      +||+|||++++++.+.+.
T Consensus       248 ~gK~Tlp~i~~l~~a~~~  265 (302)
T 3p8l_A          248 LNKSTYPALLGIAGAKDA  265 (302)
T ss_dssp             ---CCHHHHHCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHCHHH
T ss_conf             599849999999867799