PSIBLAST alignment of GI: 254780755 and protein with PDB id: 1rtr
>gi|46015555|pdb|1RTR|A Chain A, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate Synthase Length = 301
>gi|46015556|pdb|1RTR|B Chain B, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate Synthase Length = 301
Score = 58.8 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 49/322 (15%)
Query: 12 MEKVNFLILKRICSDV--EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLAC 69
+++VN + I V + + + Y + +GGKR+RP+L L T L + + A
Sbjct: 10 IDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAI 69
Query: 70 AIEFIHTATLLHDDV--VDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ 127
A+E IHT +L+HDD+ +D+ RRGK+ V+G T++L GD LL++AF ++
Sbjct: 70 ALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRL 129
Query: 128 EALEALSLVACTLAEGELRQLSLSKN-------LDVTEEDYLHVIKSKTAVLFSAALEVS 180
+ ++ + + + E + K+KT L + A+ +
Sbjct: 130 TDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSA 189
Query: 181 SLIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVIL 240
+ IA V ++ ++ L+SY +LG+ FQ+ DD+LD G+ ++GK +G D N K T
Sbjct: 190 ADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTY---- 245
Query: 241 AFQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKDSLRC 300
++ ++ A E + + A D L
Sbjct: 246 ------------------------------VSLLGKDGA----EDKLTYHRDAAVDELTQ 271
Query: 301 LPDSSWKKSLMEVVDFCLQRLN 322
+ + K L+E+VD R +
Sbjct: 272 IDEQFNTKHLLEIVDLFYSRDH 293