PSIBLAST alignment of GI: 254780755 and protein with PDB id: 1ubx
>gi|157834060|pdb|1UBX|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase Length = 367
Score = 52.3 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 26/321 (8%)
Query: 22 RICSDVEMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDN-------HVLLACAIEFI 74
+ V + +V++Y GGK R + +A L G + + IE
Sbjct: 51 EVGDAVARLKEVLQYN-APGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELF 109
Query: 75 HTATLLHDDVVDDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALS 134
A+L+ DD++D S RRG++ G + FLL + V++ ++ +
Sbjct: 110 QAASLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVH 169
Query: 135 LVACTLAEGELRQLSLS-------------KNLDVTEEDYLHVIKSKTAVLFSAALEVSS 181
L+ L +L + + K+ +
Sbjct: 170 LLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAMY 229
Query: 182 LIAGVQNSVRQALKSYGMNLGIAFQLVDDVLDYRGEVNEMGKNIGEDFRNGKPTLPVILA 241
++ + K+ + +G FQ+ DD LD G+ GK + N L V
Sbjct: 230 MVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGDPALTGKVGTDIQDNKCSWLVVQCL 289
Query: 242 FQRGTKREKNFWKSTINDGKISVENLKKAFIIMRENRALVDTEYRAYSYGQKAKD-SLRC 300
+ ++ + + V +K+ + + A E +Y Q+ +
Sbjct: 290 QRVTPEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNR 349
Query: 301 LPDSSWKKSLMEVVDFCLQRL 321
LP K+ + + +R
Sbjct: 350 LP----KEIFLGLAQKIYKRQ 366